Query 030958
Match_columns 168
No_of_seqs 158 out of 1126
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 11:03:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030958.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030958hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 100.0 7.3E-55 2.5E-59 326.9 20.5 164 1-165 1-164 (165)
2 3h8k_A Ubiquitin-conjugating e 100.0 1.3E-54 4.6E-59 325.2 21.8 163 4-166 2-164 (164)
3 3rz3_A Ubiquitin-conjugating e 100.0 9.4E-54 3.2E-58 325.6 18.6 167 1-167 3-175 (183)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 4.1E-52 1.4E-56 312.8 20.0 151 1-166 1-151 (169)
5 4gpr_A Ubiquitin-conjugating e 100.0 8.5E-52 2.9E-56 306.1 19.9 148 3-164 2-149 (151)
6 2aak_A UBC1, ubiquitin conjuga 100.0 1E-51 3.5E-56 306.0 19.5 149 3-165 2-150 (152)
7 2awf_A Ubiquitin-conjugating e 100.0 3.7E-52 1.3E-56 313.9 15.1 157 3-159 15-172 (172)
8 2c2v_B Ubiquitin-conjugating e 100.0 4.5E-52 1.6E-56 308.5 15.1 150 2-165 2-151 (154)
9 1zdn_A Ubiquitin-conjugating e 100.0 1.6E-51 5.5E-56 306.7 18.0 149 2-164 10-158 (158)
10 1z2u_A Ubiquitin-conjugating e 100.0 3.8E-51 1.3E-55 302.3 19.2 148 3-164 2-149 (150)
11 2ayv_A Ubiquitin-conjugating e 100.0 3.8E-51 1.3E-55 306.8 19.3 148 3-164 19-166 (166)
12 2e2c_A Ubiquitin conjugating e 100.0 3.5E-51 1.2E-55 304.3 18.3 148 3-165 7-154 (156)
13 2c4o_A Ubiquitin-conjugating e 100.0 8E-51 2.7E-55 304.8 19.8 148 3-164 17-164 (165)
14 3rcz_B SUMO-conjugating enzyme 100.0 4.9E-51 1.7E-55 305.3 18.5 151 3-164 8-162 (163)
15 2bep_A Ubiquitin-conjugating e 100.0 1.3E-50 4.6E-55 302.0 19.4 149 2-164 5-157 (159)
16 2gjd_A Ubiquitin-conjugating e 100.0 7.4E-51 2.5E-55 302.8 17.9 152 1-164 1-156 (157)
17 2r0j_A Ubiquitin carrier prote 100.0 5.4E-51 1.9E-55 301.2 17.0 146 6-165 2-147 (149)
18 1fxt_A Ubiquitin-conjugating e 100.0 3.1E-51 1.1E-55 302.5 14.8 146 6-164 2-148 (149)
19 2grr_A Ubiquitin-conjugating e 100.0 1.3E-50 4.5E-55 302.6 18.1 154 1-165 3-160 (161)
20 1yh2_A HSPC150 protein similar 100.0 2.9E-50 9.8E-55 302.9 20.1 153 3-165 2-154 (169)
21 1jat_A Ubiquitin-conjugating e 100.0 7.7E-51 2.6E-55 302.2 15.2 148 4-165 4-151 (155)
22 1i7k_A Ubiquitin-conjugating e 100.0 1.1E-50 3.7E-55 307.4 15.7 149 2-165 27-175 (179)
23 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.8E-50 1.3E-54 307.5 18.2 149 3-165 30-192 (193)
24 3fn1_B NEDD8-conjugating enzym 100.0 9.5E-50 3.2E-54 299.6 19.2 154 3-164 12-166 (167)
25 3bzh_A Ubiquitin-conjugating e 100.0 1.9E-49 6.6E-54 303.9 19.9 147 4-164 47-193 (194)
26 2pwq_A Ubiquitin conjugating e 100.0 6.7E-50 2.3E-54 310.8 17.0 149 3-165 21-170 (216)
27 3k9o_A Ubiquitin-conjugating e 100.0 1.4E-49 4.7E-54 306.7 18.3 149 3-165 3-155 (201)
28 1wzv_A Ubiquitin-conjugating e 100.0 1.6E-49 5.4E-54 295.1 17.1 148 5-165 4-151 (155)
29 1yrv_A Ubiquitin-conjugating l 100.0 1.7E-49 5.8E-54 298.5 15.5 148 2-162 20-168 (169)
30 2y9m_A Ubiquitin-conjugating e 100.0 1.1E-48 3.7E-53 295.1 18.5 152 2-165 3-168 (172)
31 1tte_A Ubiquitin-conjugating e 100.0 9.9E-50 3.4E-54 309.7 12.4 148 5-165 2-150 (215)
32 3e46_A Ubiquitin-conjugating e 100.0 2.6E-48 8.9E-53 308.0 19.7 149 3-165 55-207 (253)
33 1y8x_A Ubiquitin-conjugating e 100.0 3.9E-48 1.3E-52 288.9 17.5 144 4-163 5-148 (160)
34 1c4z_D UBCH7, ubiquitin conjug 100.0 4.8E-49 1.6E-53 292.2 11.0 147 6-165 3-149 (154)
35 2nvu_C NEDD8-conjugating enzym 100.0 8.9E-48 3.1E-52 291.8 17.1 145 3-163 24-168 (180)
36 2onu_A Ubiquitin-conjugating e 100.0 1.7E-48 5.9E-53 288.6 11.0 144 5-165 2-147 (152)
37 2z5d_A Ubiquitin-conjugating e 100.0 4.2E-48 1.4E-52 292.9 12.6 143 5-165 25-169 (179)
38 3o2u_A NEDD8-conjugating enzym 100.0 1.4E-46 4.8E-51 287.4 16.0 145 3-163 27-177 (190)
39 1yf9_A Ubiquitin carrier prote 100.0 4.5E-47 1.6E-51 285.7 12.7 142 5-164 12-155 (171)
40 4ddg_A Ubiquitin-conjugating e 100.0 6.4E-46 2.2E-50 312.0 19.4 148 4-165 2-149 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.3E-45 4.5E-50 277.0 11.3 142 3-158 6-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 1.8E-44 6.3E-49 267.8 10.1 132 3-148 19-156 (156)
43 1jat_B Ubiquitin-conjugating e 100.0 1.4E-44 5E-49 263.6 6.7 131 1-145 2-138 (138)
44 3ceg_A Baculoviral IAP repeat- 100.0 3E-42 1E-46 280.5 15.8 156 2-164 73-242 (323)
45 2fo3_A Ubiquitin-conjugating e 100.0 3.8E-42 1.3E-46 246.9 13.9 117 4-134 5-122 (125)
46 2a4d_A Ubiquitin-conjugating e 100.0 4.3E-42 1.5E-46 255.7 13.6 128 4-142 24-156 (160)
47 2h2y_A Ubiquitin-conjugating e 100.0 2.4E-41 8.1E-46 246.0 14.9 116 4-133 19-135 (136)
48 2hlw_A Ubiquitin-conjugating e 100.0 1.6E-41 5.4E-46 255.1 8.6 128 4-142 34-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 2E-40 7E-45 240.9 12.3 109 7-129 24-136 (136)
50 1zuo_A Hypothetical protein LO 100.0 5.2E-41 1.8E-45 255.7 4.3 144 2-166 24-183 (186)
51 2f4w_A Ubiquitin-conjugating e 100.0 1.1E-38 3.7E-43 243.1 16.2 138 3-153 12-152 (187)
52 2z6o_A UFM1-conjugating enzyme 99.9 5.2E-29 1.8E-33 183.6 -0.2 115 6-147 33-161 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.2E-20 7.4E-25 138.5 10.1 113 8-135 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 2.7E-20 9.2E-25 134.4 -1.6 83 5-94 34-127 (168)
55 3obq_A Tumor susceptibility ge 99.5 7.9E-15 2.7E-19 106.9 7.1 80 32-130 50-138 (146)
56 2ebm_A RWD domain-containing p 97.1 0.0048 1.6E-07 43.0 9.4 68 6-76 11-78 (128)
57 3zqs_A E3 ubiquitin-protein li 96.1 0.04 1.4E-06 41.1 8.7 83 8-129 4-87 (186)
58 2day_A Ring finger protein 25; 95.9 0.029 9.8E-07 38.9 6.9 69 8-77 11-83 (128)
59 2yz0_A Serine/threonine-protei 95.7 0.12 4.2E-06 36.1 9.9 68 6-76 11-85 (138)
60 2daw_A RWD domain containing p 95.6 0.28 9.5E-06 35.2 11.4 24 54-77 76-99 (154)
61 2ebk_A RWD domain-containing p 94.5 0.064 2.2E-06 37.1 5.3 67 8-75 10-78 (128)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 93.4 0.42 1.4E-05 33.2 7.7 68 6-76 11-86 (137)
63 2dax_A Protein C21ORF6; RWD do 91.6 0.31 1.1E-05 34.7 5.2 25 53-77 73-97 (152)
64 2cwb_A Chimera of immunoglobul 77.3 0.48 1.6E-05 32.2 0.0 32 129-160 19-50 (108)
65 3u3c_B Paxillin LD2 peptide; 4 65.4 6.8 0.00023 18.8 2.6 21 5-25 5-25 (26)
66 2bum_A Protocatechuate 3,4-dio 25.6 62 0.0021 24.1 3.5 26 51-76 109-139 (209)
67 3keb_A Probable thiol peroxida 23.3 51 0.0017 24.7 2.7 48 82-142 142-189 (224)
68 3rls_A YAF9, protein AF-9 homo 23.1 2.2E+02 0.0074 20.6 6.4 43 33-77 30-72 (175)
69 2f4m_B UV excision repair prot 20.4 1.1E+02 0.0037 18.2 3.2 20 137-156 37-56 (61)
70 2rf4_B DNA-directed RNA polyme 20.1 54 0.0018 21.0 1.8 13 5-17 62-74 (87)
71 2ccv_A Helix pomatia agglutini 20.1 1.7E+02 0.0058 18.9 4.5 26 51-77 27-52 (101)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=7.3e-55 Score=326.90 Aligned_cols=164 Identities=54% Similarity=0.951 Sum_probs=157.0
Q ss_pred CcchHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccc
Q 030958 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (168)
Q Consensus 1 m~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (168)
|+ +.+.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 1 M~-~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MS-KTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -C-HHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 65 48999999999999999999999999766799999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Q 030958 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCV 160 (168)
Q Consensus 81 Pnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~ 160 (168)
|||+.+|+|||++|+++++++.+++.+.++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+++
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~ 159 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSI 159 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 99999999999999988888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh
Q 030958 161 RKSLE 165 (168)
Q Consensus 161 ~~~~~ 165 (168)
++|++
T Consensus 160 ~~~~~ 164 (165)
T 2ucz_A 160 LKSLG 164 (165)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99976
No 2
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.3e-54 Score=325.16 Aligned_cols=163 Identities=55% Similarity=1.003 Sum_probs=157.5
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 83 (168)
+.|.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 56899999999999999999999999866699999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Q 030958 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 163 (168)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~ 163 (168)
+.+|+||+++|++++++..+++.+.++|+|++||.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+++++|
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 030958 164 LEM 166 (168)
Q Consensus 164 ~~~ 166 (168)
+++
T Consensus 162 ~~~ 164 (164)
T 3h8k_A 162 LGL 164 (164)
T ss_dssp HTC
T ss_pred hcC
Confidence 864
No 3
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=9.4e-54 Score=325.61 Aligned_cols=167 Identities=47% Similarity=0.911 Sum_probs=146.6
Q ss_pred CcchHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccc
Q 030958 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (168)
Q Consensus 1 m~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (168)
|+++.+.+||++||++|++++++||++.+.+++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 88899999999999999999999999996668899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHH------CHHHHHH
Q 030958 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRE------RKDEFKK 154 (168)
Q Consensus 81 Pnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~------~~~~f~~ 154 (168)
|||+.+|+||+++|++++++..+++...++|+|+++|++||++|+++|.+|++++|+|.|||.+|++ |+++|++
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~ 162 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTD 162 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHH
Confidence 9999999999999998888888887778999999999999999999999999999999999999999 7899999
Q ss_pred HHHHHHHHHhhhc
Q 030958 155 KVSRCVRKSLEML 167 (168)
Q Consensus 155 ~~~~~~~~~~~~~ 167 (168)
+||+++++|++.+
T Consensus 163 ~v~~~v~~s~~~~ 175 (183)
T 3rz3_A 163 IIRKQVLGTKVDA 175 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.1e-52 Score=312.81 Aligned_cols=151 Identities=42% Similarity=0.785 Sum_probs=144.8
Q ss_pred CcchHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccc
Q 030958 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (168)
Q Consensus 1 m~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (168)
|+ +++.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 1 Ms-~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MS-TPARRRLMRDFKRMKEDAPPGVSASPL-PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -C-CHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEec-CCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 54 578999999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Q 030958 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCV 160 (168)
Q Consensus 81 Pnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~ 160 (168)
|||+.+|.|||++|+ ++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+|+
T Consensus 79 PNI~~~G~ICl~iL~-------------~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~ 145 (169)
T 1ayz_A 79 PNVYANGEICLDILQ-------------NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETV 145 (169)
T ss_dssp TTBCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCCCCeEeehhhc-------------cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHH
Confidence 999999999999997 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 030958 161 RKSLEM 166 (168)
Q Consensus 161 ~~~~~~ 166 (168)
++++..
T Consensus 146 ~~~a~~ 151 (169)
T 1ayz_A 146 EKSWED 151 (169)
T ss_dssp HHHHHH
T ss_pred HHHcCC
Confidence 998753
No 5
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=8.5e-52 Score=306.13 Aligned_cols=148 Identities=33% Similarity=0.701 Sum_probs=143.8
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.|.+||++|+++|+++++.|+++.+. ++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPV-GDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 5678999999999999999999999996 789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|+||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||+|+++
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ 147 (151)
T 4gpr_A 81 INKNGVICLDILK-------------DQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRM 147 (151)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ECCCCEEEccccc-------------CCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 889999999999999999999999999999999999999999999999999999
Q ss_pred Hh
Q 030958 163 SL 164 (168)
Q Consensus 163 ~~ 164 (168)
++
T Consensus 148 ya 149 (151)
T 4gpr_A 148 YA 149 (151)
T ss_dssp HC
T ss_pred hc
Confidence 75
No 6
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1e-51 Score=305.99 Aligned_cols=149 Identities=40% Similarity=0.794 Sum_probs=143.9
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
|+++.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 2 s~~a~~RL~~E~~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 2 STPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEeC-CCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 4578999999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|.||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~ 147 (152)
T 2aak_A 81 IYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQ 147 (152)
T ss_dssp BCTTSBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCEEechhhc-------------CCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999996 789999999999999999999999999999999999999999999999999999
Q ss_pred Hhh
Q 030958 163 SLE 165 (168)
Q Consensus 163 ~~~ 165 (168)
++.
T Consensus 148 ~a~ 150 (152)
T 2aak_A 148 SWT 150 (152)
T ss_dssp HCC
T ss_pred Hcc
Confidence 864
No 7
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.7e-52 Score=313.91 Aligned_cols=157 Identities=62% Similarity=1.209 Sum_probs=115.9
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.+.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 56789999999999999999999999986689999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHH-HHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKD-EFKKKVSRC 159 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~-~f~~~~~~~ 159 (168)
|+.+|+||+++|++++++.++|+...++|+|+++|.+||++|+++|.+|++++|+|.|||++|++|++ +|+++||+|
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999999998788888877777899999999999999999999999999999999999999999 999999975
No 8
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-52 Score=308.48 Aligned_cols=150 Identities=31% Similarity=0.627 Sum_probs=142.0
Q ss_pred cchHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccc
Q 030958 2 AKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHP 81 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 81 (168)
+|..+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPD-ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHP 80 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccC
Confidence 35567899999999999999999999986 77999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Q 030958 82 NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVR 161 (168)
Q Consensus 82 nv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~ 161 (168)
||+.+|.|||++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||+|++
T Consensus 81 nv~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~ 147 (154)
T 2c2v_B 81 NVDKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTR 147 (154)
T ss_dssp TBCTTCBBCCHHHH-------------TSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccCCeEEchhcc-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 99999999999997 78999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 030958 162 KSLE 165 (168)
Q Consensus 162 ~~~~ 165 (168)
++..
T Consensus 148 ~~a~ 151 (154)
T 2c2v_B 148 LYAM 151 (154)
T ss_dssp HHSS
T ss_pred HhcC
Confidence 9863
No 9
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-51 Score=306.69 Aligned_cols=149 Identities=28% Similarity=0.515 Sum_probs=143.7
Q ss_pred cchHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccc
Q 030958 2 AKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHP 81 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 81 (168)
+|..+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 10 ~s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 88 (158)
T 1zdn_A 10 LPPHIIRLVYKEVTTLTADPPDGIKVFPN-EEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHP 88 (158)
T ss_dssp SCHHHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccC
Confidence 45678999999999999999999999985 88999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Q 030958 82 NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVR 161 (168)
Q Consensus 82 nv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~ 161 (168)
||+.+|.||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||+|++
T Consensus 89 nv~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~ 155 (158)
T 1zdn_A 89 NVGANGEICVNVLK-------------RDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 155 (158)
T ss_dssp TBCTTSBBCHHHHT-------------TTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCCEEehhhcC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 99999999999997 78999999999999999999999999999999999999999999999999999
Q ss_pred HHh
Q 030958 162 KSL 164 (168)
Q Consensus 162 ~~~ 164 (168)
+++
T Consensus 156 ~~A 158 (158)
T 1zdn_A 156 IHG 158 (158)
T ss_dssp HHC
T ss_pred HhC
Confidence 863
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=3.8e-51 Score=302.33 Aligned_cols=148 Identities=34% Similarity=0.759 Sum_probs=143.3
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
|+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPV-GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEC-CCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 5678999999999999999999999986 689999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|+||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 147 (150)
T 1z2u_A 81 INSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQK 147 (150)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCeEeecccc-------------CCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 789999999999999999999999999999999999999999999999999998
Q ss_pred Hh
Q 030958 163 SL 164 (168)
Q Consensus 163 ~~ 164 (168)
++
T Consensus 148 ~a 149 (150)
T 1z2u_A 148 YA 149 (150)
T ss_dssp HC
T ss_pred Hh
Confidence 75
No 11
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-51 Score=306.76 Aligned_cols=148 Identities=34% Similarity=0.727 Sum_probs=142.6
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 97 (166)
T 2ayv_A 19 FQGALKRINKELNDLSKDPPTNCSAGPV-GDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPN 97 (166)
T ss_dssp CTTHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCc
Confidence 3468899999999999999999999985 789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|.|||++|+ ++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+|+++
T Consensus 98 I~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~ 164 (166)
T 2ayv_A 98 INSQGAICLDILK-------------DQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQK 164 (166)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCeEEccccc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 789999999999999999999999999999999999999999999999999998
Q ss_pred Hh
Q 030958 163 SL 164 (168)
Q Consensus 163 ~~ 164 (168)
++
T Consensus 165 ~A 166 (166)
T 2ayv_A 165 YA 166 (166)
T ss_dssp HC
T ss_pred hC
Confidence 63
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-51 Score=304.31 Aligned_cols=148 Identities=36% Similarity=0.699 Sum_probs=142.5
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 7 ~~~~~~RL~kEl~~l~~~~~~~i~~~p~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 85 (156)
T 2e2c_A 7 RHSVSKRLQQELRTLLMSGDPGITAFPD-GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPN 85 (156)
T ss_dssp CCCHHHHHHHHHHHHHHHCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEC-CCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCC
Confidence 4568999999999999999999999986 779999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|.|||++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.|||++| +|+++|.++||+|+++
T Consensus 86 v~~~G~iCl~iL~-------------~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~ 151 (156)
T 2e2c_A 86 VDQSGNICLDILK-------------ENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKT 151 (156)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred CccCceEECcccc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHH
Confidence 9999999999997 7899999999999999999999999999999999999 8999999999999999
Q ss_pred Hhh
Q 030958 163 SLE 165 (168)
Q Consensus 163 ~~~ 165 (168)
+..
T Consensus 152 ~~~ 154 (156)
T 2e2c_A 152 AQS 154 (156)
T ss_dssp HHH
T ss_pred hcc
Confidence 864
No 13
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=8e-51 Score=304.77 Aligned_cols=148 Identities=34% Similarity=0.752 Sum_probs=143.2
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
.+.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPn 95 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 95 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCc
Confidence 4678999999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|.||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++
T Consensus 96 V~~~G~ICl~iL~-------------~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~ 162 (165)
T 2c4o_A 96 INSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQK 162 (165)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCeEeehhhc-------------CCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 789999999999999999999999999999999999999999999999999998
Q ss_pred Hh
Q 030958 163 SL 164 (168)
Q Consensus 163 ~~ 164 (168)
++
T Consensus 163 ~a 164 (165)
T 2c4o_A 163 YA 164 (165)
T ss_dssp TT
T ss_pred Hh
Confidence 75
No 14
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-51 Score=305.33 Aligned_cols=151 Identities=38% Similarity=0.731 Sum_probs=142.7
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCC----CceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDES----NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~----~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 78 (168)
|.+|.+||++|+++|++++++|+++.+.+++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 6789999999999999999999999987331 899999999999999999999999999999999999999999999
Q ss_pred ccccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Q 030958 79 WHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSR 158 (168)
Q Consensus 79 ~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~ 158 (168)
|||||+.+|+||+++|+. .++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+
T Consensus 88 ~HPnV~~~G~iCl~iL~~-----------~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~ 156 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNE-----------EEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRA 156 (163)
T ss_dssp CSTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred ccCCCCCCCcEeccccCC-----------CCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHH
Confidence 999999999999999972 246999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 030958 159 CVRKSL 164 (168)
Q Consensus 159 ~~~~~~ 164 (168)
|+++++
T Consensus 157 ~~~~ya 162 (163)
T 3rcz_B 157 QARENA 162 (163)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999975
No 15
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.3e-50 Score=302.01 Aligned_cols=149 Identities=28% Similarity=0.646 Sum_probs=142.3
Q ss_pred cchHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccc
Q 030958 2 AKSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~~---~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 78 (168)
|++.+.+||++|+++|+++ ++.|+++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 5668999999999999985 5789999986 67999999999999999999999999999999999999999999999
Q ss_pred ccccccC-CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHH
Q 030958 79 WHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVS 157 (168)
Q Consensus 79 ~HPnv~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~ 157 (168)
|||||+. +|.|||++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||
T Consensus 84 ~HPni~~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~ 150 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTAR 150 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHH
T ss_pred CccCCCCCCCEEeChhhh-------------ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHH
Confidence 9999995 8999999997 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 030958 158 RCVRKSL 164 (168)
Q Consensus 158 ~~~~~~~ 164 (168)
+|++++.
T Consensus 151 ~~~~~~a 157 (159)
T 2bep_A 151 LWAHVYA 157 (159)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 9999875
No 16
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=7.4e-51 Score=302.83 Aligned_cols=152 Identities=35% Similarity=0.648 Sum_probs=141.9
Q ss_pred CcchHHHHHHHHHHHHHhhCCCCCeEEEecCC----CCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEec
Q 030958 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDE----SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (168)
Q Consensus 1 m~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~----~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (168)
|+ +.+.+||++|+++|++++++|+++.+..+ +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 1 Ms-~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MS-SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp ---CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 54 57899999999999999999999998632 48999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHH
Q 030958 77 EMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKV 156 (168)
Q Consensus 77 ~i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~ 156 (168)
++|||||+.+|.||+++|+. .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~ 148 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNE-----------DQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKV 148 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHH
T ss_pred CCccCCCCCCCcEeeecccC-----------CCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHH
Confidence 99999999999999999972 1379999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 030958 157 SRCVRKSL 164 (168)
Q Consensus 157 ~~~~~~~~ 164 (168)
|+|++++.
T Consensus 149 ~~~~~~~a 156 (157)
T 2gjd_A 149 LLQAKQYS 156 (157)
T ss_dssp HHHHHHTB
T ss_pred HHHHHHhc
Confidence 99999875
No 17
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=5.4e-51 Score=301.19 Aligned_cols=146 Identities=29% Similarity=0.630 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccccC
Q 030958 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (168)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 85 (168)
+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 80 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPV-PENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK 80 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC
Confidence 3589999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHhh
Q 030958 86 DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLE 165 (168)
Q Consensus 86 ~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~~~ 165 (168)
+|+||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 81 ~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 81 LGRICLDILK-------------DKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp TCBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCEEechhcC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999997 789999999999999999999999999999999999999999999999999998763
No 18
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=3.1e-51 Score=302.51 Aligned_cols=146 Identities=28% Similarity=0.636 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccccC
Q 030958 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (168)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 85 (168)
+.+||++|+++|++++++|+++.+.+++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 46999999999999999999999975559999999999999999999999999999999999999999999999999998
Q ss_pred -CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHh
Q 030958 86 -DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 164 (168)
Q Consensus 86 -~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~~ 164 (168)
+|.|||++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 82 ~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a 148 (149)
T 1fxt_A 82 VTGAICLDILK-------------NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 148 (149)
T ss_dssp SSCCBCCHHHH-------------TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHC
T ss_pred CCCeEeCCcCC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 9999999997 78999999999999999999999999999999999999999999999999999875
No 19
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.3e-50 Score=302.63 Aligned_cols=154 Identities=35% Similarity=0.623 Sum_probs=144.0
Q ss_pred CcchHHHHHHHHHHHHHhhCCCCCeEEEecC----CCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEec
Q 030958 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVD----ESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (168)
Q Consensus 1 m~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~----~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (168)
||++.+.+||++|+++|++++++|+.+.+.. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 3556799999999999999999999998862 368999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHH
Q 030958 77 EMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKV 156 (168)
Q Consensus 77 ~i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~ 156 (168)
++|||||+.+|.||+++|+. .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|
T Consensus 83 ~i~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~ 151 (161)
T 2grr_A 83 PLFHPNVYPSGTVCLSILEE-----------DKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRV 151 (161)
T ss_dssp CCCSTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHH
T ss_pred CcccCCCCCCCeEeehhcCC-----------CCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHH
Confidence 99999999999999999972 1489999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 030958 157 SRCVRKSLE 165 (168)
Q Consensus 157 ~~~~~~~~~ 165 (168)
|+++++++.
T Consensus 152 ~~~~~~~a~ 160 (161)
T 2grr_A 152 RAQAKKFAP 160 (161)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhc
Confidence 999998763
No 20
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-50 Score=302.91 Aligned_cols=153 Identities=27% Similarity=0.566 Sum_probs=144.8
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
|+++.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQD-KDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcccc
Confidence 6789999999999999999999999985 789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|.|||++|+.+. .++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+|+++
T Consensus 81 v~~~G~iCl~iL~~~~---------~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~ 151 (169)
T 1yh2_A 81 IDSAGRICLDVLKLPP---------KGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEK 151 (169)
T ss_dssp BCTTCBBCCGGGSCTT---------TSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcCCeEecccccCCc---------ccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999996311 2689999999999999999999999999999999999999999999999999998
Q ss_pred Hhh
Q 030958 163 SLE 165 (168)
Q Consensus 163 ~~~ 165 (168)
++.
T Consensus 152 ~a~ 154 (169)
T 1yh2_A 152 HAR 154 (169)
T ss_dssp HSC
T ss_pred Hcc
Confidence 763
No 21
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=7.7e-51 Score=302.17 Aligned_cols=148 Identities=30% Similarity=0.637 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 83 (168)
+.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~-~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPH-DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 356799999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Q 030958 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 163 (168)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~ 163 (168)
+.+|.|||++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 83 ~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~ 149 (155)
T 1jat_A 83 DRLGRICLDVLK-------------TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLY 149 (155)
T ss_dssp CTTCCBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEchhhc-------------cCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999996 7899999999999999999999999999999999999999999999999999987
Q ss_pred hh
Q 030958 164 LE 165 (168)
Q Consensus 164 ~~ 165 (168)
..
T Consensus 150 a~ 151 (155)
T 1jat_A 150 AK 151 (155)
T ss_dssp SE
T ss_pred cc
Confidence 63
No 22
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-50 Score=307.37 Aligned_cols=149 Identities=35% Similarity=0.608 Sum_probs=141.4
Q ss_pred cchHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccc
Q 030958 2 AKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHP 81 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 81 (168)
+++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 105 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPE-SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHP 105 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEE-TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccC
Confidence 35678899999999999999999999986 77999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Q 030958 82 NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVR 161 (168)
Q Consensus 82 nv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~ 161 (168)
||+.+|.|||++|+ ++|+|+++|.+||++|+++|.+|++++|+|.+||++| +|+++|.++|+++++
T Consensus 106 NV~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~ 171 (179)
T 1i7k_A 106 NVDTQGNISLDILK-------------EKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYS 171 (179)
T ss_dssp TBCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHH
T ss_pred ccccCCeEEcccCc-------------CcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHH
Confidence 99999999999997 7899999999999999999999999999999999999 999999999999999
Q ss_pred HHhh
Q 030958 162 KSLE 165 (168)
Q Consensus 162 ~~~~ 165 (168)
+++.
T Consensus 172 ~~~~ 175 (179)
T 1i7k_A 172 KQVT 175 (179)
T ss_dssp TTCC
T ss_pred HHhc
Confidence 8763
No 23
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-50 Score=307.48 Aligned_cols=149 Identities=31% Similarity=0.622 Sum_probs=138.7
Q ss_pred chHHHHHHHHHHHHHhhCCC-------------CCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCC
Q 030958 3 KSQASLLLQKQLKDLCKNPV-------------DGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSP 69 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~-------------~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~p 69 (168)
++.+.+||++|+++|+++++ .||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++|
T Consensus 30 ~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~P 108 (193)
T 2f4z_A 30 TPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIV-GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNP 108 (193)
T ss_dssp --CHHHHHHHHHHHHHHC----------------CEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEc-CCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCC
Confidence 34578999999999999887 79999987 67999999999999999999999999999999999999
Q ss_pred CEEEEeccccccccc-CCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHC
Q 030958 70 PTVRFTSEMWHPNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRER 148 (168)
Q Consensus 70 P~v~f~t~i~HPnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~ 148 (168)
|+|+|.|+||||||+ .+|.|||++|+ ++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|
T Consensus 109 P~V~F~T~i~HPNI~~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d 175 (193)
T 2f4z_A 109 PKMKFVTKIWHPNISSQTGAICLDILK-------------HEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIEN 175 (193)
T ss_dssp CEEEESSCCCBTTBCTTTCBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHC
T ss_pred CeEEEecCCccCCCcCCCCEEECcccc-------------ccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHC
Confidence 999999999999999 58999999997 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 030958 149 KDEFKKKVSRCVRKSLE 165 (168)
Q Consensus 149 ~~~f~~~~~~~~~~~~~ 165 (168)
+++|.++||+|++++..
T Consensus 176 ~~~f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 176 HPLFVQTAKLWTETFAK 192 (193)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 99999999999999864
No 24
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=9.5e-50 Score=299.62 Aligned_cols=154 Identities=27% Similarity=0.541 Sum_probs=143.9
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.+.+||++|+++|++++++||++.+.+++|++.|+++| ||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 12 ~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 90 (167)
T 3fn1_B 12 VSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPN 90 (167)
T ss_dssp CCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSS
T ss_pred hhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCC
Confidence 3679999999999999999999999977678999999999 899999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccC-CCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSS-PNDESPANIDAAKEWRERKDEFKKKVSRCVR 161 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~-p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~ 161 (168)
|+.+|+||+++|+.+++ ..++|+|+++|.+||++|+++|.+ |++++|+|.|||++|++|+++|.++||+|++
T Consensus 91 v~~~G~iCl~iL~~~~~-------~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~ 163 (167)
T 3fn1_B 91 ITETGEICLSLLREHSI-------DGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIK 163 (167)
T ss_dssp BCTTCCBCCGGGSBCSS-------STTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCEEechhhccCCC-------CCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 99999999999974321 236899999999999999999999 6999999999999999999999999999999
Q ss_pred HHh
Q 030958 162 KSL 164 (168)
Q Consensus 162 ~~~ 164 (168)
+++
T Consensus 164 ~~A 166 (167)
T 3fn1_B 164 RYA 166 (167)
T ss_dssp HHC
T ss_pred Hhc
Confidence 975
No 25
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.9e-49 Score=303.94 Aligned_cols=147 Identities=32% Similarity=0.666 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 83 (168)
+.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPK-GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecc-cCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceE
Confidence 568899999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Q 030958 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 163 (168)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~ 163 (168)
+.+|.|||++|+ ++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 126 ~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~y 192 (194)
T 3bzh_A 126 NSQGVICLDILK-------------DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRY 192 (194)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCceechhhh-------------ccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999997 7899999999999999999999999999999999999999999999999999987
Q ss_pred h
Q 030958 164 L 164 (168)
Q Consensus 164 ~ 164 (168)
.
T Consensus 193 a 193 (194)
T 3bzh_A 193 A 193 (194)
T ss_dssp C
T ss_pred h
Confidence 5
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=6.7e-50 Score=310.80 Aligned_cols=149 Identities=36% Similarity=0.733 Sum_probs=143.2
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIK-DSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 4679999999999999999999999996 779999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Q 030958 83 VY-PDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVR 161 (168)
Q Consensus 83 v~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~ 161 (168)
|+ .+|.|||++|+ ++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+|++
T Consensus 100 I~~~~G~ICL~iL~-------------~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~ 166 (216)
T 2pwq_A 100 ISSQTGAICLDVLK-------------NEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTK 166 (216)
T ss_dssp BCTTTCBBCCHHHH-------------HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CcCCCCEEEchhhc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 99 48999999997 77999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 030958 162 KSLE 165 (168)
Q Consensus 162 ~~~~ 165 (168)
++..
T Consensus 167 ~ya~ 170 (216)
T 2pwq_A 167 TFAT 170 (216)
T ss_dssp HHSC
T ss_pred HhcC
Confidence 8763
No 27
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.4e-49 Score=306.75 Aligned_cols=149 Identities=28% Similarity=0.646 Sum_probs=141.5
Q ss_pred chHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccc
Q 030958 3 KSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~---~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (168)
|+.|.+||++|+++|+++ ++.|+++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|
T Consensus 3 s~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 3 ANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp -CTTHHHHHHHHHHHHTCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 456899999999999987 3679999997 779999999999999999999999999999999999999999999999
Q ss_pred cccccC-CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Q 030958 80 HPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSR 158 (168)
Q Consensus 80 HPnv~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~ 158 (168)
||||+. +|.||+++|+ ++|+|+++|.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+
T Consensus 82 HPnv~~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~ 148 (201)
T 3k9o_A 82 HPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARL 148 (201)
T ss_dssp BTTBCTTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCCcCCCCeeeCcccc-------------cCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Confidence 999995 8999999997 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 030958 159 CVRKSLE 165 (168)
Q Consensus 159 ~~~~~~~ 165 (168)
|++++..
T Consensus 149 ~~~~~a~ 155 (201)
T 3k9o_A 149 WAHVYAG 155 (201)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9998864
No 28
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.6e-49 Score=295.12 Aligned_cols=148 Identities=28% Similarity=0.565 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccccc
Q 030958 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (168)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 84 (168)
.+.+||++|+++|++++++|+.+...+++|+++|+++|. |++|||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 478999999999999999999993335889999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHh
Q 030958 85 PDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSL 164 (168)
Q Consensus 85 ~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~~ 164 (168)
.+|.||+++|+ .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++
T Consensus 83 ~~G~iCl~iL~------------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a 150 (155)
T 1wzv_A 83 ENGQICLPIIS------------SENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFG 150 (155)
T ss_dssp TTCBCCCGGGC------------TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCeEeecCCC------------ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999993 188999999999999999999999999999999999999999999999999999976
Q ss_pred h
Q 030958 165 E 165 (168)
Q Consensus 165 ~ 165 (168)
.
T Consensus 151 ~ 151 (155)
T 1wzv_A 151 V 151 (155)
T ss_dssp E
T ss_pred c
Confidence 3
No 29
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-49 Score=298.46 Aligned_cols=148 Identities=32% Similarity=0.588 Sum_probs=139.3
Q ss_pred cchHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccc
Q 030958 2 AKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHP 81 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 81 (168)
|++.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 98 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPV-SEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHP 98 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEEC-STTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccC
Confidence 34579999999999999999999999986 78999999999999999999999999999999999999999999999999
Q ss_pred cc-cCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Q 030958 82 NV-YPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCV 160 (168)
Q Consensus 82 nv-~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~ 160 (168)
|| +.+|.||+++|+. .++|+|+++|.+||++|+++|.+|++++|+|.|||++|++|+++|+++ |+++
T Consensus 99 NI~~~~G~ICL~iL~~-----------~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v 166 (169)
T 1yrv_A 99 NVDPHTGQPCIDFLDN-----------PEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLF 166 (169)
T ss_dssp TBCTTTCCBCCHHHHC-----------GGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHH
T ss_pred cccCCCCeEeehhhcC-----------CcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHh
Confidence 99 7899999999951 267999999999999999999999999999999999999999999999 9888
Q ss_pred HH
Q 030958 161 RK 162 (168)
Q Consensus 161 ~~ 162 (168)
++
T Consensus 167 ~~ 168 (169)
T 1yrv_A 167 NR 168 (169)
T ss_dssp C-
T ss_pred hC
Confidence 75
No 30
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.1e-48 Score=295.06 Aligned_cols=152 Identities=28% Similarity=0.497 Sum_probs=139.9
Q ss_pred cchHHHHHHHHHHHHHhh-C-C------CC---CeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCC
Q 030958 2 AKSQASLLLQKQLKDLCK-N-P------VD---GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPP 70 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~-~-~------~~---g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP 70 (168)
|++.+.+||++|+++|++ + + +. ++.+.+++++|+++|+++|.||++|||+||+|+|+|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 456899999999999998 5 3 33 46677755889999999999999999999999999999999999999
Q ss_pred EEEEec-cccccccc-CCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHH-
Q 030958 71 TVRFTS-EMWHPNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRE- 147 (168)
Q Consensus 71 ~v~f~t-~i~HPnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~- 147 (168)
+|+|.| ++|||||+ .+|.|||++|+. ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~------------~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~ 150 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKP------------EEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCG 150 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGST------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTT
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCC------------CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhC
Confidence 999999 99999996 799999999962 789999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 030958 148 RKDEFKKKVSRCVRKSLE 165 (168)
Q Consensus 148 ~~~~f~~~~~~~~~~~~~ 165 (168)
|+++|.++||+|+++++.
T Consensus 151 d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 151 DMSAYQGIVKYFLAERER 168 (172)
T ss_dssp CHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999999874
No 31
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=9.9e-50 Score=309.68 Aligned_cols=148 Identities=28% Similarity=0.628 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccccc
Q 030958 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (168)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 84 (168)
.+.+||++|+++|++++++||++.+.+++++++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999997555678999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Q 030958 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 163 (168)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~ 163 (168)
. +|.|||++|+ ++|+|++||.+||++|+++|.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 82 ~~~G~ICL~iL~-------------~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~y 148 (215)
T 1tte_A 82 SVTGAICLDILR-------------NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLY 148 (215)
T ss_dssp SSSSCCCSSTTT-------------CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred CCCCEEECccCC-------------CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9 9999999997 7899999999999999999999999999999999999999999999999999987
Q ss_pred hh
Q 030958 164 LE 165 (168)
Q Consensus 164 ~~ 165 (168)
..
T Consensus 149 A~ 150 (215)
T 1tte_A 149 AS 150 (215)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 32
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.6e-48 Score=307.96 Aligned_cols=149 Identities=28% Similarity=0.646 Sum_probs=142.5
Q ss_pred chHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccc
Q 030958 3 KSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~---~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (168)
++.+.+||++||++|+++ ++.||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~-~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 567999999999999987 4789999997 779999999999999999999999999999999999999999999999
Q ss_pred cccccC-CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Q 030958 80 HPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSR 158 (168)
Q Consensus 80 HPnv~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~ 158 (168)
||||+. +|.|||++|+ ++|+|+++|.+||++|+++|.+|++++|+|.|||++|++|+++|.++||+
T Consensus 134 HPNV~~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~ 200 (253)
T 3e46_A 134 HPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARL 200 (253)
T ss_dssp BTTBCTTTCBBCCGGGT-------------TCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCccCCCCeeeccccc-------------CCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHH
Confidence 999995 8999999997 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 030958 159 CVRKSLE 165 (168)
Q Consensus 159 ~~~~~~~ 165 (168)
|++++..
T Consensus 201 ~t~~yA~ 207 (253)
T 3e46_A 201 WAHVYAG 207 (253)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9999864
No 33
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-48 Score=288.89 Aligned_cols=144 Identities=31% Similarity=0.607 Sum_probs=136.6
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 83 (168)
+.+.+||++|+++| ++++|+++...+++|+++|+++| ||++|||+||.|+|+|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 56899999999999 57789999843588999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Q 030958 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 163 (168)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~ 163 (168)
+.+|.||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++.+
T Consensus 82 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~ 148 (160)
T 1y8x_A 82 DLEGNVCLNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 148 (160)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSE
T ss_pred CCCCeEEcccch-------------hhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 999999999997 7899999999999999999999999999999999999999999999999999854
No 34
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=4.8e-49 Score=292.23 Aligned_cols=147 Identities=31% Similarity=0.672 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccccC
Q 030958 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (168)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 85 (168)
+.+||++|+++|++++++|+.+.+.+++|+++|+++|. |++|||+||+|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 67999999999999999999877666889999999997 99999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHhh
Q 030958 86 DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKSLE 165 (168)
Q Consensus 86 ~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~~~ 165 (168)
+|.||+++|+ .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++++..
T Consensus 82 ~G~iCl~iL~------------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 82 KGQVCLPVIS------------AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp TCBBCCTTTS------------SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC--
T ss_pred CCEEECCCCC------------CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 9999999996 2789999999999999999999999999999999999999999999999999988753
No 35
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-48 Score=291.76 Aligned_cols=145 Identities=30% Similarity=0.577 Sum_probs=137.7
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.+.+||++|+++| ++++|+++...+++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 467999999999999 57889999843588999999998 999999999999999999999999999999999999999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
|+.+|.||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++.
T Consensus 101 V~~~G~iCl~iL~-------------~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 101 IDLEGNVALNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp BCTTSBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCCCCcEEccccc-------------ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999997 789999999999999999999999999999999999999999999999999986
Q ss_pred H
Q 030958 163 S 163 (168)
Q Consensus 163 ~ 163 (168)
+
T Consensus 168 ~ 168 (180)
T 2nvu_C 168 G 168 (180)
T ss_dssp E
T ss_pred C
Confidence 4
No 36
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.7e-48 Score=288.57 Aligned_cols=144 Identities=28% Similarity=0.570 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccccc
Q 030958 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (168)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 84 (168)
.+.+||++|+++++++ |+++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 77 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELN-NGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVD 77 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEc-cCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCc
Confidence 4679999999999874 7888886 78999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHH-HHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLS-IISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~-i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
. +|.||+++|+ ++|+|+++|.+||.+ |+++|.+|++++|+|.+||++|++|+++|.++||+++++
T Consensus 78 ~~~G~iCl~il~-------------~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~ 144 (152)
T 2onu_A 78 EASGSVCLDVIN-------------QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKL 144 (152)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcCCeEeccccc-------------ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 5 8999999996 789999999999999 689999999999999999999999999999999999999
Q ss_pred Hhh
Q 030958 163 SLE 165 (168)
Q Consensus 163 ~~~ 165 (168)
++.
T Consensus 145 ~a~ 147 (152)
T 2onu_A 145 YAS 147 (152)
T ss_dssp HSC
T ss_pred hcc
Confidence 864
No 37
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.2e-48 Score=292.92 Aligned_cols=143 Identities=27% Similarity=0.588 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccccc
Q 030958 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (168)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 84 (168)
++.+||++|+++|++ .|+++.+. +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~--ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL--GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE--EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC--CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 689999999999985 57888885 4789999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHH-HHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLS-IISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~-i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
. +|.||+++|+ ++|+|+++|.+||++ |+++|.+|++++|+|.+||++|++|+++|.++||+|+++
T Consensus 100 ~~~G~ICL~iL~-------------~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~ 166 (179)
T 2z5d_A 100 EASGTVCLDVIN-------------QTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQK 166 (179)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCeEeccccc-------------cCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 8 9999999997 789999999999999 999999999999999999999999999999999999998
Q ss_pred Hhh
Q 030958 163 SLE 165 (168)
Q Consensus 163 ~~~ 165 (168)
+..
T Consensus 167 ~a~ 169 (179)
T 2z5d_A 167 YAT 169 (179)
T ss_dssp HSS
T ss_pred Hcc
Confidence 764
No 38
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.4e-46 Score=287.40 Aligned_cols=145 Identities=29% Similarity=0.512 Sum_probs=136.9
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEe---cCCCCce---EEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEec
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGL---VDESNVF---EWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~---~~~~~~~---~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (168)
++.+.+||++||++|+ +++|+++.. .+++|++ +|+++|. |++|||+||.|+|+|.||++||++||+|+|.|
T Consensus 27 ~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 103 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLK 103 (190)
T ss_dssp CCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECS
T ss_pred ccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEec
Confidence 3678999999999998 778999982 3588999 9999996 88899999999999999999999999999999
Q ss_pred ccccccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHH
Q 030958 77 EMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKV 156 (168)
Q Consensus 77 ~i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~ 156 (168)
++|||||+.+|.||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++|
T Consensus 104 ~i~HPnV~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~a 170 (190)
T 3o2u_A 104 KIFHPNIDLKGNVCLNILR-------------EDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAV 170 (190)
T ss_dssp CCCCTTBCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHH
T ss_pred CcccCCCCCCCeEechhcc-------------CCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHH
Confidence 9999999999999999997 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 030958 157 SRCVRKS 163 (168)
Q Consensus 157 ~~~~~~~ 163 (168)
|+|++.+
T Consensus 171 r~~~~~~ 177 (190)
T 3o2u_A 171 RLTMSGG 177 (190)
T ss_dssp HHHHBTC
T ss_pred HHHHHhc
Confidence 9999754
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-47 Score=285.74 Aligned_cols=142 Identities=26% Similarity=0.504 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccccc
Q 030958 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (168)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 84 (168)
++.+||++|+++|++++. ++ +. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 578999999999999874 44 33 67999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHH-HHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q 030958 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSI-ISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRK 162 (168)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i-~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~ 162 (168)
. +|.||+++|+ ++|+|+++|.+||++| +++|.+|++++|+|.+||++|++|+++|.++||+++++
T Consensus 87 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~ 153 (171)
T 1yf9_A 87 ERSGSVCLDVIN-------------QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVST 153 (171)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccCCeEeccccc-------------cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 5 9999999996 7899999999999997 79999999999999999999999999999999999998
Q ss_pred Hh
Q 030958 163 SL 164 (168)
Q Consensus 163 ~~ 164 (168)
+.
T Consensus 154 ~a 155 (171)
T 1yf9_A 154 HA 155 (171)
T ss_dssp HC
T ss_pred Hc
Confidence 75
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=6.4e-46 Score=311.96 Aligned_cols=148 Identities=32% Similarity=0.722 Sum_probs=143.4
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 83 (168)
+.|.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 80 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 80 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccccccc
Confidence 468999999999999999999999997 7899999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Q 030958 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRERKDEFKKKVSRCVRKS 163 (168)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~~~~ 163 (168)
+.+|.||+++|+ ++|+|++||.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 81 ~~~G~iCl~il~-------------~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~ 147 (399)
T 4ddg_A 81 NSNGSISLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 147 (399)
T ss_dssp CTTCBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCeEeCcccc-------------cCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999997 8899999999999999999999999999999999999999999999999999987
Q ss_pred hh
Q 030958 164 LE 165 (168)
Q Consensus 164 ~~ 165 (168)
..
T Consensus 148 a~ 149 (399)
T 4ddg_A 148 AM 149 (399)
T ss_dssp TS
T ss_pred hc
Confidence 63
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.3e-45 Score=277.03 Aligned_cols=142 Identities=23% Similarity=0.490 Sum_probs=131.2
Q ss_pred chHHHHHHHHHHHHHhhCC------------CCCeEEEecCCCCceEEEEEEeCCCCCCCC--CcEEEEEEECCCCCCCC
Q 030958 3 KSQASLLLQKQLKDLCKNP------------VDGFSAGLVDESNVFEWSVSIIGPPDTLYE--GGFFNAIMTFPDNYPVS 68 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~------------~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~--gg~f~~~i~fp~~YP~~ 68 (168)
|+.+.+||++|+++|++++ +.|+.+.+. ++|+++|+++|.||++|||+ ||.|+|+|.||++||++
T Consensus 6 s~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 6 KNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVD-TDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEE-ESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred cHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeC-CCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 3468999999999999987 778999875 88999999999999999999 99999999999999999
Q ss_pred CCEEEEecccccccccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHH-HHHHhccC--CCCCCcccHHHHHHH
Q 030958 69 PPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVL-SIISMLSS--PNDESPANIDAAKEW 145 (168)
Q Consensus 69 pP~v~f~t~i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~-~i~~~l~~--p~~~~p~n~eaa~~~ 145 (168)
||+|+|.|++|||||+.+|.||+++|+ ++|+|++++.++|+ .|++++.. |++++|+|.|||++|
T Consensus 85 pP~v~f~t~i~HPnv~~~G~iCl~il~-------------~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~ 151 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVTGEGGICDRMVN-------------DFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYL 151 (167)
T ss_dssp CCEEEESSCCCCSSCCTTSCCCTHHHH-------------TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHH
T ss_pred CCEEEEeCCcccccCCCCCEEEcccCc-------------CCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHH
Confidence 999999999999999999999999997 88999999999765 56677764 899999999999999
Q ss_pred HHCHHHHHHHHHH
Q 030958 146 RERKDEFKKKVSR 158 (168)
Q Consensus 146 ~~~~~~f~~~~~~ 158 (168)
++|+++|+++||+
T Consensus 152 ~~d~~~f~~~vrr 164 (167)
T 4ds2_A 152 EKFPQDFAARVRR 164 (167)
T ss_dssp HHCHHHHHHHHTT
T ss_pred HHCHHHHHHHHhh
Confidence 9999999999983
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.8e-44 Score=267.78 Aligned_cols=132 Identities=27% Similarity=0.467 Sum_probs=121.3
Q ss_pred chHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccc
Q 030958 3 KSQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~-~~~g~~~~~~~~~--~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (168)
+.++.+||++|+++|+++ +++|+++.+.+++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 19 IVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred cchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 456889999999999998 7889999986433 5999999999999999999999999999999999999999999999
Q ss_pred cccccCCCce---eeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHHC
Q 030958 80 HPNVYPDGKV---CISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRER 148 (168)
Q Consensus 80 HPnv~~~G~i---Cl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~~ 148 (168)
||||+.+|+| ||++|+ +|+|+++|++||++|+++|.+|++++|+|.+||++|.+|
T Consensus 99 HPNV~~~G~icisCL~iL~--------------~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 99 MSCVDNCGRVIKNNLHILK--------------NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CTTBCTTSBBCGGGSHHHH--------------TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred cCCCccCCeEehhhccccc--------------CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999999 888884 499999999999999999999999999999999999775
No 43
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.4e-44 Score=263.63 Aligned_cols=131 Identities=27% Similarity=0.491 Sum_probs=118.8
Q ss_pred CcchHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecc
Q 030958 1 MAKSQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (168)
Q Consensus 1 m~s~~~~~RL~~E~~~l~~~-~~~g~~~~~~~~~--~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (168)
|++.++.+||++|+++++++ ++.|+++.+.+++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 77778999999999999998 7889999986434 59999999999999999999999999999999999999999999
Q ss_pred cccccccCC-Cce--eeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHH
Q 030958 78 MWHPNVYPD-GKV--CISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEW 145 (168)
Q Consensus 78 i~HPnv~~~-G~i--Cl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~ 145 (168)
+|||||+.+ |.| ||++| ++|+|+++|++||.+|+++|.+|++++|+|.+||.+|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l--------------~~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTL--------------RDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHH--------------HTCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccC--------------CCCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999986 999 99988 4699999999999999999999999999999988654
No 44
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=280.48 Aligned_cols=156 Identities=26% Similarity=0.424 Sum_probs=139.5
Q ss_pred cchHHHHHHHHHHHHHhhCCCCC----eEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecc
Q 030958 2 AKSQASLLLQKQLKDLCKNPVDG----FSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~~~~~g----~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (168)
+|+.+.+||++|+++|++++++| +.+.+. ++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~-ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~ 151 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCD-EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETT 151 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEE-SSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCS
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeeccc-CCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEecc
Confidence 46789999999999999988875 455554 7899999999999999999999999999999999999999999998
Q ss_pred -----cccccccCCCceeeccCCCCCCCCCCccccCCCCCCcC-CHHHHHHHHHHhcc--CCCCCCcccHHH--HHHHHH
Q 030958 78 -----MWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVH-TVESIVLSIISMLS--SPNDESPANIDA--AKEWRE 147 (168)
Q Consensus 78 -----i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~-~i~~iL~~i~~~l~--~p~~~~p~n~ea--a~~~~~ 147 (168)
+|||||+.+|+|||++|+++. +...++|+|++ +|.+||++|+++|. +|++++|+|.++ +.+|.+
T Consensus 152 ~g~~~ifHPNV~~~G~ICLsiL~~~~------g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~ 225 (323)
T 3ceg_A 152 GGHSVRFNPNLYNDGKVCLSILNTWH------GRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQ 225 (323)
T ss_dssp TTTTCCCBTTBCTTCBBCCGGGTSSC------CCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHH
T ss_pred CCCcccccCCCCcCCeEechhhcccc------CCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhh
Confidence 999999999999999997432 12236899999 89999999999996 677799999987 689999
Q ss_pred CHHHHHHHHHHHHHHHh
Q 030958 148 RKDEFKKKVSRCVRKSL 164 (168)
Q Consensus 148 ~~~~f~~~~~~~~~~~~ 164 (168)
|+++|.++||+++.++.
T Consensus 226 d~~~Y~~~vr~~t~k~A 242 (323)
T 3ceg_A 226 SSREYDGNIRQATVKWA 242 (323)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHh
Confidence 99999999999999864
No 45
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-42 Score=246.94 Aligned_cols=117 Identities=33% Similarity=0.672 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccc-cccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPn 82 (168)
+.+.+||++|++++++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVH-PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeC-cchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 358899999999999999999999985 78999999999999999999999999999999999999999999997 9999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCC
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDE 134 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~ 134 (168)
|+.+|+||+++|+ ++|+|+++|.+||.+|+++|.+|+..
T Consensus 84 v~~~G~iCl~iL~-------------~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 84 VYSNGDICLSLLG-------------DDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp BCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCCEEEchhcC-------------CCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9999999999997 78999999999999999999999864
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4.3e-42 Score=255.74 Aligned_cols=128 Identities=24% Similarity=0.451 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--ceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g-~~~~~~~~~~--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (168)
.++.+||++|+++|++++++| +.+.+.+++| +++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 578999999999999999888 7888755555 9999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhcc-CCCCCCcccHHHH
Q 030958 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLS-SPNDESPANIDAA 142 (168)
Q Consensus 81 Pnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~-~p~~~~p~n~eaa 142 (168)
|||+ .+|+||+++|+. .++|+|+++|++||++|+++|. +||.++|+|.|||
T Consensus 104 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISV-----------LAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp TTBCTTTCBBCGGGSHH-----------HHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CCEECCCCEEehhhcCC-----------ccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 9999 699999999851 1579999999999999999995 6999999999987
No 47
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.4e-41 Score=246.01 Aligned_cols=116 Identities=35% Similarity=0.693 Sum_probs=110.9
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccc-cccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPn 82 (168)
+.+.+||++|+++++++++.|+++.+. ++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++ ||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVH-PSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEec-cccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 468899999999999999999999985 78999999999999999999999999999999999999999999997 9999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCC
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPND 133 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~ 133 (168)
|+.+|+||+++|+ ++|+|+++|.+||.+|+++|.+|+.
T Consensus 98 v~~~G~ICl~iL~-------------~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 98 VYSNGDICLSVLG-------------DDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp BCTTCCBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCCCEEECcccc-------------CCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 9999999999997 7899999999999999999999874
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=255.12 Aligned_cols=128 Identities=24% Similarity=0.451 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--ceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccc
Q 030958 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (168)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g-~~~~~~~~~~--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (168)
.++.+||++|+++|++++++| +.+.+.+++| +++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 458999999999999999888 6777755554 9999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhcc-CCCCCCcccHHHH
Q 030958 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLS-SPNDESPANIDAA 142 (168)
Q Consensus 81 Pnv~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~-~p~~~~p~n~eaa 142 (168)
|||+ .+|.||+++|+. .++|+|+++|++||++|+++|. .||.++|+|.|||
T Consensus 114 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISV-----------LAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SSBCSSSCBBCTTTCHH-----------HHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CCEeCCCCEEEhhhcCC-----------CCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999 699999999841 1579999999999999999997 5999999999987
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-40 Score=240.88 Aligned_cols=109 Identities=43% Similarity=0.798 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE--ecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccc--ccc
Q 030958 7 SLLLQKQLKDLCKNPVDGFSAG--LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW--HPN 82 (168)
Q Consensus 7 ~~RL~~E~~~l~~~~~~g~~~~--~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~--HPn 82 (168)
.+||++|+++|++++++|+++. + +++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++| |||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPN 102 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKS-VQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPH 102 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTC-CCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEee-CccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCcc
Confidence 4999999999999999999865 5 4789999999999999999999999999999999999999999999999 999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhcc
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLS 129 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~ 129 (168)
|+.+|+||+++|+ ++|+|+++|++||++|+++|.
T Consensus 103 V~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 103 VYSNGHICLSILT-------------EDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCCeEEchhcC-------------CCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999997 889999999999999999984
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=5.2e-41 Score=255.72 Aligned_cols=144 Identities=22% Similarity=0.467 Sum_probs=129.3
Q ss_pred cchHHHHHHHHHHHHHhhCC---CCCeEEEecCCCCceEEEEEEeCC-CCCCCCC-----------cEEEEEEECCCCCC
Q 030958 2 AKSQASLLLQKQLKDLCKNP---VDGFSAGLVDESNVFEWSVSIIGP-PDTLYEG-----------GFFNAIMTFPDNYP 66 (168)
Q Consensus 2 ~s~~~~~RL~~E~~~l~~~~---~~g~~~~~~~~~~~~~w~~~i~gp-~~tpy~g-----------g~f~~~i~fp~~YP 66 (168)
++..+.+||++||++|++++ +.++++.+. ++|+++|+++|.|| ++|||+| |.|+|+|.||++||
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~-~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELI-NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEE-TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEc-CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 46789999999999999998 678999987 67999999999997 9999998 89999999999999
Q ss_pred CCCCEEEEecccccc-cccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHH
Q 030958 67 VSPPTVRFTSEMWHP-NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEW 145 (168)
Q Consensus 67 ~~pP~v~f~t~i~HP-nv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~ 145 (168)
++||+|+|.|++||| ||+.+|.|||++|+. ++|+|+++|++||++|+++|.+|+... .|
T Consensus 103 ~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~------------~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~ 162 (186)
T 1zuo_A 103 FDPPFVRVVLPVLSGGYVLGGGALCMELLTK------------QGWSSAYSIESVIMQINATLVKGKARV--------QF 162 (186)
T ss_dssp SSCCEEEEEESCEESTTBCGGGBBCCGGGST------------TTCCTTSCHHHHHHHHHHHHHHTTCEE--------CT
T ss_pred CCCCeEEEeCCccCCCccCCCCcEEeccCCC------------CCCCCcCcHHHHHHHHHHHHcCCChhH--------hh
Confidence 999999999999999 699999999999962 689999999999999999999986532 34
Q ss_pred HHCHHHHHHHHHHHHHHHhhh
Q 030958 146 RERKDEFKKKVSRCVRKSLEM 166 (168)
Q Consensus 146 ~~~~~~f~~~~~~~~~~~~~~ 166 (168)
..++++|.+++++++.+++.+
T Consensus 163 ~~~~~~Y~~~~~~~~~~~~~~ 183 (186)
T 1zuo_A 163 GANKNQYNLARAQQSYNSIVQ 183 (186)
T ss_dssp TCCTTCCCHHHHHHHHHHHHH
T ss_pred ccCHHHHhHHHHHHHHHHHHH
Confidence 456788889999998888765
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-38 Score=243.14 Aligned_cols=138 Identities=22% Similarity=0.487 Sum_probs=111.3
Q ss_pred chHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEeccccccc
Q 030958 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (168)
Q Consensus 3 s~~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 82 (168)
++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+ |||
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~ 88 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYICAEPL-PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGR 88 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSS
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cce
Confidence 4568899999999999999999999986 7899999999999999999999999999999999999999999999 999
Q ss_pred ccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcc---cHHHHHHHHHCHHHHH
Q 030958 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPA---NIDAAKEWRERKDEFK 153 (168)
Q Consensus 83 v~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~---n~eaa~~~~~~~~~f~ 153 (168)
|+.+|+|||++|.. +.++|+|+++|.+||.+|+++|.+|+++... ..+..+.|..+...|.
T Consensus 89 ~~~~G~ICL~iL~~----------~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~ 152 (187)
T 2f4w_A 89 FKCNTRLCLSITDF----------HPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFN 152 (187)
T ss_dssp BCTTSCBC--------------------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHH
T ss_pred eccCCeEeeecccc----------CccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHh
Confidence 99999999999942 1278999999999999999999999886431 2334444444444333
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=5.2e-29 Score=183.59 Aligned_cols=115 Identities=14% Similarity=0.196 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCc----------EEEEEEECCCCCCCCCCEEEEe
Q 030958 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRFT 75 (168)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f~ 75 (168)
..+||++|++.|++ ++.+. .+|+..|.+++.||+||+|+|| .|.+++.||++||++||+|+|.
T Consensus 33 w~~RL~eE~k~L~k------~v~p~-k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~ 105 (172)
T 2z6o_A 33 WVQRLKEEYQSLIR------YVENN-KNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVP 105 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHH-HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHH------HhccC-ccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeC
Confidence 39999999999998 35554 6799999999999999999999 9999999999999999999999
Q ss_pred cc-cccccccCCCceeeccCCCCCCCCCCccccCC---CCCCcCCHHHHHHHHHHhccCCCCCCcccHHHHHHHHH
Q 030958 76 SE-MWHPNVYPDGKVCISILHPPGDDPNGYELATE---RWTPVHTVESIVLSIISMLSSPNDESPANIDAAKEWRE 147 (168)
Q Consensus 76 t~-i~HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~---~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa~~~~~ 147 (168)
+. +|||||+.+|+|||++|. .. .|+|+++|..+|.- -....+..|+..+..+
T Consensus 106 ~~~~~hpnmY~~G~ICLdIL~------------kp~Ws~~~P~~~IahiL~l--------gl~pwla~eip~lv~~ 161 (172)
T 2z6o_A 106 ELDGKTAKMYRGGKICLTDHF------------KPLWARNVPKFGLAHLMAL--------GLGPWLAVEIPDLIQK 161 (172)
T ss_dssp GGTTTCSSBCTTSBBCCCTTH------------HHHHHHHTTSCCHHHHHHH--------THHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcEechhhc------------cccccccCCccCHHHHHhh--------ccCchhhhhhHHHHHc
Confidence 98 999999999999999994 13 45599999999832 2334556666666544
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.83 E-value=2.2e-20 Score=138.53 Aligned_cols=113 Identities=22% Similarity=0.307 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhhCCC---CCeEEEecCCCCceEEEEEEeCCCCCCCCCcE---EEEEEECCCCCCCCCCEEEEecc----
Q 030958 8 LLLQKQLKDLCKNPV---DGFSAGLVDESNVFEWSVSIIGPPDTLYEGGF---FNAIMTFPDNYPVSPPTVRFTSE---- 77 (168)
Q Consensus 8 ~RL~~E~~~l~~~~~---~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t~---- 77 (168)
+|..+|+.++.+.-+ +...+... ++....+.+.+.|.-..+|+|+. |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~-~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTH-SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEC-TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEc-CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 567778877765322 12333333 55566677777777778999998 88999999999999999988651
Q ss_pred ------cc-cccccCCCceeeccCCCCCCCCCCccccCCCCCC-cCCHHHHHHHHHHhccCCCCCC
Q 030958 78 ------MW-HPNVYPDGKVCISILHPPGDDPNGYELATERWTP-VHTVESIVLSIISMLSSPNDES 135 (168)
Q Consensus 78 ------i~-HPnv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p-~~~i~~iL~~i~~~l~~p~~~~ 135 (168)
++ |||||.+|+||+++| .+|+| +.++.++|.+|+++|.+|+++.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL--------------~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPIL--------------HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGG--------------GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCccc--------------ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 999999999999999 45999 6899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.76 E-value=2.7e-20 Score=134.37 Aligned_cols=83 Identities=19% Similarity=0.353 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCc----------EEEEEEECCCCCCCCCCEEEE
Q 030958 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRF 74 (168)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f 74 (168)
.-..||.+||+.|.+ ++.. +.++-..|...+.||+||+|.|+ .|.+++.||.+||.+||+|+|
T Consensus 34 ~w~~RlkeEy~alI~------yv~~-nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 34 KWTARLKEEYASLIT------YVEH-NKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp HHHHHHHHHHHHHHH------HHHH-HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHH------HHHh-cccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence 357899999999943 1221 23344578999999999999999 999999999999999999999
Q ss_pred ecc-cccccccCCCceeeccC
Q 030958 75 TSE-MWHPNVYPDGKVCISIL 94 (168)
Q Consensus 75 ~t~-i~HPnv~~~G~iCl~~l 94 (168)
.+. .+|||++.+|+|||+++
T Consensus 107 p~ldgkt~kmYr~GkICLdIh 127 (168)
T 3kpa_A 107 PELEGKTVKMYRGGKICMTTH 127 (168)
T ss_dssp GGGTTTCSSEETTTEECCCTT
T ss_pred ccccCcCccccCCCcEEeccc
Confidence 995 89999999999999975
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.55 E-value=7.9e-15 Score=106.88 Aligned_cols=80 Identities=21% Similarity=0.463 Sum_probs=71.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCcEEEE--EEECCCCCCCCCCEEEEecc------cccccccCCCceeeccCCCCCCCCCC
Q 030958 32 ESNVFEWSVSIIGPPDTLYEGGFFNA--IMTFPDNYPVSPPTVRFTSE------MWHPNVYPDGKVCISILHPPGDDPNG 103 (168)
Q Consensus 32 ~~~~~~w~~~i~gp~~tpy~gg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HPnv~~~G~iCl~~l~~~~~~~~~ 103 (168)
..++..|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++ ..|||||.+|+||++.|.
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~-------- 116 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH-------- 116 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH--------
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc--------
Confidence 458999999996 5799999985 999999999999999 6655 489999999999999994
Q ss_pred ccccCCCCCC-cCCHHHHHHHHHHhccC
Q 030958 104 YELATERWTP-VHTVESIVLSIISMLSS 130 (168)
Q Consensus 104 ~~~~~~~W~p-~~~i~~iL~~i~~~l~~ 130 (168)
+|++ ..++.+++..|++.|..
T Consensus 117 ------~W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 117 ------EWKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp ------TCCTTTCCHHHHHHHHHHHHHH
T ss_pred ------ccCCCCCCHHHHHHHHHHHHhh
Confidence 4998 88999999999999875
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.09 E-value=0.0048 Score=42.97 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEec
Q 030958 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (168)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (168)
...+...|+..|..--+..+.+ . ......+.+.|....+..-+.-.+.+.|.||++||..||.|.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~--~-~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTV--L-SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--C-CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEE--c-cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4566788998887754444543 2 223456666665322222234478899999999999999998755
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.06 E-value=0.04 Score=41.15 Aligned_cols=83 Identities=16% Similarity=0.257 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhhCCCCCeE-EEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecccccccccCC
Q 030958 8 LLLQKQLKDLCKNPVDGFS-AGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPD 86 (168)
Q Consensus 8 ~RL~~E~~~l~~~~~~g~~-~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 86 (168)
.+|.+|+.++ |+. +... +.++....+.+.. =.|....++|.++.+||.+||.+...-|. |.
T Consensus 4 ~~li~Ei~~i------GW~~l~~i-d~~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~---- 65 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYA-DTCFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFPV--PF---- 65 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEE-CTTSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCSS--CC----
T ss_pred HHHHHHHHHh------CCceeeee-cCCccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc----
Confidence 3688899998 532 2223 4578888888874 35678999999999999999977655543 10
Q ss_pred CceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhcc
Q 030958 87 GKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLS 129 (168)
Q Consensus 87 G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~ 129 (168)
. -.|+|..++.+++.+++..+.
T Consensus 66 --------~-------------~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 --------C-------------ASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp --------C-------------CCCCTTCCHHHHHHHHHHHHH
T ss_pred --------c-------------cccCCCccHHHHHHHHHHHHH
Confidence 0 459999999998887776654
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.87 E-value=0.029 Score=38.89 Aligned_cols=69 Identities=13% Similarity=0.214 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhhCCCCCeEEEecCC--CCceEEEEEEeCCCCCCC--CCcEEEEEEECCCCCCCCCCEEEEecc
Q 030958 8 LLLQKQLKDLCKNPVDGFSAGLVDE--SNVFEWSVSIIGPPDTLY--EGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (168)
Q Consensus 8 ~RL~~E~~~l~~~~~~g~~~~~~~~--~~~~~w~~~i~gp~~tpy--~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (168)
.+...|+..|+.--+..+.+.. .. .....+.+.|..+.+..- ..-.+.+.|.||++||..+|.|.+.+.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~-~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIK-GNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEEC-CTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEec-CCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4677888888775544555432 11 235566666653222111 124788999999999999999988763
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.12 Score=36.12 Aligned_cols=68 Identities=10% Similarity=0.189 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCC-------CCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEec
Q 030958 6 ASLLLQKQLKDLCKNPVDGFSAGLVDE-------SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (168)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~g~~~~~~~~-------~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (168)
...+-..|+..|..--+..+.+ .+. .....+.+.|....+ .-..-.+.+.|.+|++||..||.|.+.+
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~--~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDFTD--LTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSEEC--CSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred hHHHHHHHHHHHHHHChhhhee--cccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 3456678888887654333432 212 124567777763222 2123478899999999999999998765
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.57 E-value=0.28 Score=35.19 Aligned_cols=24 Identities=21% Similarity=0.240 Sum_probs=21.5
Q ss_pred EEEEEEECCCCCCCCCCEEEEecc
Q 030958 54 FFNAIMTFPDNYPVSPPTVRFTSE 77 (168)
Q Consensus 54 ~f~~~i~fp~~YP~~pP~v~f~t~ 77 (168)
.+.+.|.+|++||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999986653
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.53 E-value=0.064 Score=37.14 Aligned_cols=67 Identities=13% Similarity=0.145 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhhCCCC--CeEEEecCCCCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEe
Q 030958 8 LLLQKQLKDLCKNPVD--GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFT 75 (168)
Q Consensus 8 ~RL~~E~~~l~~~~~~--g~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 75 (168)
.+...|+..|+.--.. .+.+.-....+...+.+.|.. .+..-..-.+.+.|.+|++||..||.|.+.
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 3466788777653221 233211111234677787863 221111247899999999999999998655
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.37 E-value=0.42 Score=33.18 Aligned_cols=68 Identities=15% Similarity=0.088 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCC------CceEEEEEEeCCCC-C-CCCCcEEEEEEECCCCCCCCCCEEEEec
Q 030958 6 ASLLLQKQLKDLCKNPVDGFSAGLVDES------NVFEWSVSIIGPPD-T-LYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (168)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~g~~~~~~~~~------~~~~w~~~i~gp~~-t-py~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (168)
...+...|+..|+.--+..+... +.+ ....+.+.|. +.+ + .-..-.+.+.|.||++||..+|.|.+..
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~--~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDL--RPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEEC--CCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceec--cCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 34567788888876544444432 121 1345666664 222 1 0112468999999999999999998743
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.57 E-value=0.31 Score=34.68 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=21.6
Q ss_pred cEEEEEEECCCCCCCCCCEEEEecc
Q 030958 53 GFFNAIMTFPDNYPVSPPTVRFTSE 77 (168)
Q Consensus 53 g~f~~~i~fp~~YP~~pP~v~f~t~ 77 (168)
-.+.+.|.+|++||..||.|.+.+.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987764
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=77.31 E-value=0.48 Score=32.19 Aligned_cols=32 Identities=3% Similarity=-0.067 Sum_probs=0.0
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Q 030958 129 SSPNDESPANIDAAKEWRERKDEFKKKVSRCV 160 (168)
Q Consensus 129 ~~p~~~~p~n~eaa~~~~~~~~~f~~~~~~~~ 160 (168)
.......|.+.++|++|.++++.|...||.|+
T Consensus 19 ~~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT 50 (108)
T 2cwb_A 19 KGETTTEAVDAATAEKVFKQYANDNGVDGEWT 50 (108)
T ss_dssp --------------------------------
T ss_pred cCcccCCchhHHHHHHHHhchhcccccccccc
Confidence 33445678999999999999999999999998
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=65.38 E-value=6.8 Score=18.80 Aligned_cols=21 Identities=24% Similarity=0.246 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCe
Q 030958 5 QASLLLQKQLKDLCKNPVDGF 25 (168)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~g~ 25 (168)
.-..||.-|+...+.+|+.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 356799999999999999874
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=25.61 E-value=62 Score=24.11 Aligned_cols=26 Identities=19% Similarity=0.354 Sum_probs=22.1
Q ss_pred CCcEEEEEEECCCCCCC-----CCCEEEEec
Q 030958 51 EGGFFNAIMTFPDNYPV-----SPPTVRFTS 76 (168)
Q Consensus 51 ~gg~f~~~i~fp~~YP~-----~pP~v~f~t 76 (168)
+.|.|.|.-.+|--||. +||.|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46889999999999998 788887754
No 67
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=23.26 E-value=51 Score=24.72 Aligned_cols=48 Identities=8% Similarity=-0.114 Sum_probs=23.9
Q ss_pred cccCCCceeeccCCCCCCCCCCccccCCCCCCcCCHHHHHHHHHHhccCCCCCCcccHHHH
Q 030958 82 NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTVESIVLSIISMLSSPNDESPANIDAA 142 (168)
Q Consensus 82 nv~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~eaa 142 (168)
-|+++|+|-..-+. ......-+...+|..|..+....-...+.-.||.
T Consensus 142 vID~dG~I~~~~~~-------------~~~~~~pd~~evl~~L~~l~~~~~~~~~~~~~~~ 189 (224)
T 3keb_A 142 LADAANVVHYSERL-------------ANTRDFFDFDAIEKLLQEGEQQAMAAEREAAEAR 189 (224)
T ss_dssp EECTTCBEEEEEEC-------------SBTTCCCCHHHHHHHHHHHHHHC-----------
T ss_pred EEcCCCEEEEEEec-------------CCCCCCCCHHHHHHHHHHhhhcccccChhhhhhh
Confidence 36678888754432 2333345688899888888665444444333443
No 68
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=23.11 E-value=2.2e+02 Score=20.61 Aligned_cols=43 Identities=16% Similarity=0.367 Sum_probs=31.7
Q ss_pred CCceEEEEEEeCCCCCCCCCcEEEEEEECCCCCCCCCCEEEEecc
Q 030958 33 SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (168)
Q Consensus 33 ~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (168)
+...+|.|-+.|+.+.--..-+=++.+.+.+.||. |.-.+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 45679999999987755555677788899999974 65555554
No 69
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=20.35 E-value=1.1e+02 Score=18.16 Aligned_cols=20 Identities=10% Similarity=0.245 Sum_probs=17.6
Q ss_pred ccHHHHHHHHHCHHHHHHHH
Q 030958 137 ANIDAAKEWRERKDEFKKKV 156 (168)
Q Consensus 137 ~n~eaa~~~~~~~~~f~~~~ 156 (168)
.|++.+.+..+|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 48899999999999998865
No 70
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=20.12 E-value=54 Score=21.02 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHH
Q 030958 5 QASLLLQKQLKDL 17 (168)
Q Consensus 5 ~~~~RL~~E~~~l 17 (168)
.-+|||++||+-|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 3578999999877
No 71
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=20.07 E-value=1.7e+02 Score=18.88 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=20.2
Q ss_pred CCcEEEEEEECCCCCCCCCCEEEEecc
Q 030958 51 EGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (168)
Q Consensus 51 ~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (168)
.+..+...|.|+..|+. +|+|.+.-.
T Consensus 27 g~R~~~~~V~F~~~F~~-~P~V~v~l~ 52 (101)
T 2ccv_A 27 NTRELAKNITFASPYCR-PPVVLLSIT 52 (101)
T ss_dssp SCEEEEEEEECSSCCSS-CCEEEEEEE
T ss_pred cceEEEEEeEeCcccCC-CCEEEEEeE
Confidence 34578888999999984 899877644
Done!