BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030960
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana
GN=RPT3 PE=1 SV=1
Length = 408
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/173 (96%), Positives = 167/173 (96%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV
Sbjct: 236 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 295
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ MNLSDEVDLEDYVS
Sbjct: 296 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVS 355
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR NVKKPDTDFEFYK
Sbjct: 356 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFYK 408
>sp|P85200|PRS6B_HELAN 26S protease regulatory subunit 6B homolog OS=Helianthus annuus
PE=1 SV=1
Length = 414
Score = 335 bits (858), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 167/173 (96%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV
Sbjct: 242 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 301
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ MNLSDEVDLEDYVS
Sbjct: 302 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 361
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKISAAEI AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDF+FYK
Sbjct: 362 RPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK 414
>sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 413
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/173 (95%), Positives = 166/173 (95%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV
Sbjct: 241 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 300
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ MNL DEVDLEDYVS
Sbjct: 301 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS 360
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKISAAEI AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 RPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 413
>sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog OS=Dictyostelium
discoideum GN=psmC4 PE=1 SV=1
Length = 403
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 144/172 (83%), Positives = 157/172 (91%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRDVFRLA+EN+PAIIFIDE+DAIAT RFDAQTGADREVQRILMELLNQMDGFD +VNV
Sbjct: 231 LVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNV 290
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+FQ MNLSDEVDLEDYVS
Sbjct: 291 KVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVS 350
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
RPDK+S AEI +ICQEAGMHA+RKNRYVILPKDFEKGY+ ++KK +F FY
Sbjct: 351 RPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNFY 402
>sp|P46507|PRS6B_MANSE 26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1
Length = 415
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 140/173 (80%), Positives = 162/173 (93%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKEN+PAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQT NV
Sbjct: 243 MVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNV 302
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F +MNLS+EVDLE++V+
Sbjct: 303 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVA 362
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPD++S A+I AICQEAGM+AVR+NRY++LPKDFEKGY+ N+KK ++++EFYK
Sbjct: 363 RPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIKKDESEYEFYK 415
>sp|Q63570|PRS6B_RAT 26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4
PE=1 SV=1
Length = 418
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 157/173 (90%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNV
Sbjct: 246 MVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 305
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F +MNLS+EVDLEDYV+
Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK
Sbjct: 366 RPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>sp|P54775|PRS6B_MOUSE 26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1
SV=2
Length = 418
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 157/173 (90%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNV
Sbjct: 246 MVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 305
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F +MNLS+EVDLEDYV+
Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK
Sbjct: 366 RPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>sp|Q4R7L3|PRS6B_MACFA 26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4
PE=2 SV=1
Length = 418
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 157/173 (90%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNV
Sbjct: 246 MVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 305
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F +MNLS+EVDLEDYV+
Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK
Sbjct: 366 RPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>sp|P43686|PRS6B_HUMAN 26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1
SV=2
Length = 418
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 157/173 (90%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNV
Sbjct: 246 MVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 305
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F +MNLS+EVDLEDYV+
Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK
Sbjct: 366 RPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>sp|Q3T030|PRS6B_BOVIN 26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1
Length = 418
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 157/173 (90%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNV
Sbjct: 246 MVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 305
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F +MNLS+EVDLEDYV+
Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK
Sbjct: 366 RPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>sp|P46502|PRS6B_CAEEL Probable 26S protease regulatory subunit 6B OS=Caenorhabditis
elegans GN=rpt-3 PE=3 SV=1
Length = 414
Score = 286 bits (732), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/173 (80%), Positives = 154/173 (89%), Gaps = 5/173 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLAKEN+P+IIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ+ NV
Sbjct: 242 MVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNV 301
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRLVF +MNLSD+VDLED+V+
Sbjct: 302 KVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVA 361
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 168
RPDKIS A+I +ICQEAGM AVR+NRYV+L KD EK Y+ VKK DFEFYK
Sbjct: 362 RPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEFYK 414
>sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU08_1970 PE=1 SV=1
Length = 387
Score = 245 bits (626), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 141/172 (81%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLA+E AP+I+FIDEVD+IAT RFDA T ADREVQR+L+ELLNQMDGFD NV
Sbjct: 215 MVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANV 274
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNRADT+DPALLRPGRLDRKIEFPLPDRRQKRLVF +M+L+D VD+E V
Sbjct: 275 KVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVC 334
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
RP+KIS A+I +ICQEAGM AVR +RY++ +DFE+ Y V++ T FY
Sbjct: 335 RPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVERSGTQPAFY 386
>sp|P33298|PRS6B_YEAST 26S protease regulatory subunit 6B homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT3 PE=1
SV=2
Length = 428
Score = 242 bits (618), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 144/176 (81%), Gaps = 8/176 (4%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFRLA+ENAP+IIFIDEVD+IAT RFDAQTG+DREVQRIL+ELL QMDGFDQ+ NV
Sbjct: 253 MVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNV 312
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVF-----QMNLSDEVDLEDYV 114
KVIMATNRADTLDPALLRPGRLDRKIEFP L DRR++RL+F +M+L+ E DL+ +
Sbjct: 313 KVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLI 372
Query: 115 SRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDT--DFEFYK 168
R D +S A IAAI QEAG+ AVRKNRYVIL D E+ Y T VK +T F+FYK
Sbjct: 373 IRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKTDNTVDKFDFYK 428
>sp|O74894|PRS6B_SCHPO 26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpt3 PE=3 SV=1
Length = 389
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 141/175 (80%), Gaps = 7/175 (4%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFR+A+ENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELL QMDGFDQ NV
Sbjct: 215 MVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANV 274
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFQ-----MNLSDEVDLEDYV 114
KVIMATNRADTLDPALLRPGRLDRKIEFP DRRQ+RLVFQ M LS EVDL+ ++
Sbjct: 275 KVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFI 334
Query: 115 SRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTD-FEFYK 168
RPD S A+IAAI Q+AG+ AVRK+R VIL D E+ Y VK D + F FYK
Sbjct: 335 MRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFYK 389
>sp|P78578|PRS6B_ASPNG 26S protease regulatory subunit 6B homolog OS=Aspergillus niger
GN=tbpA PE=3 SV=1
Length = 423
Score = 232 bits (591), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/177 (68%), Positives = 142/177 (80%), Gaps = 9/177 (5%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVRDVFR+A+EN+PAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGF+Q+ NV
Sbjct: 247 MVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNV 306
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVF-----QMNLSDEVDLEDYV 114
KVIMATNRADTLDPALLRPGRLDRKIEFP L DRR++RL+F +M+LS EVDL+ +
Sbjct: 307 KVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLI 366
Query: 115 SRPDKISAAEIAAICQEAGMHAVRKNRYVILPK-DFEKGYRTNVKKPDTD--FEFYK 168
R + +S A IAAI QEAG+ AVRKNRY I+P+ D E Y VK EFY+
Sbjct: 367 VRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDAYAAQVKTGQEADRLEFYR 423
>sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog OS=Dictyostelium
discoideum GN=psmC1 PE=1 SV=1
Length = 439
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 128/171 (74%), Gaps = 10/171 (5%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A E AP+I+FIDE+DA+ T R+D+Q+G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 265 LVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDV 324
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F+ MNLS++V+LE++V
Sbjct: 325 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVM 384
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKG-----YRTNVKKPD 161
D +S A+I AIC E+G+ A+R+ R + DF+K YR P+
Sbjct: 385 SKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTAGAPE 435
>sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4 OS=Caenorhabditis
elegans GN=rpt-2 PE=3 SV=1
Length = 443
Score = 192 bits (488), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 132/175 (75%), Gaps = 9/175 (5%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++FR+A+ENAP+I+FIDE+DA+ T R+D+ +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 269 MVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 328
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KV+MATNR ++LDPAL+RPGR+DRKIEFPLPD + KR +FQ M L EV+LE++++
Sbjct: 329 KVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFIT 388
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV---KKPDTDFEFY 167
D++S A+I A+C EAG+ A+R+ R + +DF+K + NV KK E Y
Sbjct: 389 AKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKS-KENVLYRKKEGAPEELY 442
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 123/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A+E+AP+I+FIDE+DAI T R+D+ +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 266 LVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 325
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ M L+D+V L+D +
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D +S A+I AIC EAG+ A+R+ R + +DF+K
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 123/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A+E+AP+I+FIDE+DAI T R+D+ +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 266 LVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 325
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ M L+D+V L+D +
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D +S A+I AIC EAG+ A+R+ R + +DF+K
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 123/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A+E+AP+I+FIDE+DAI T R+D+ +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 266 LVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 325
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ M L+D+V L+D +
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D +S A+I AIC EAG+ A+R+ R + +DF+K
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 122/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A+E+ P+I+FIDE+DAI T R+D+ +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 266 LVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 325
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ M L+D+V L++ +
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIM 385
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D +S A+I AIC EAG+ A+R+ R + +DF+K
Sbjct: 386 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
>sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp.
japonica GN=TBP2 PE=2 SV=2
Length = 448
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 122/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A E +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 274 LVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDV 333
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ M L+D+V+LE++V
Sbjct: 334 KVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVM 393
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D+ S A+I AIC EAG+ A+R+ R + DF+K
Sbjct: 394 TKDEFSGADIKAICTEAGLLALRERRMKVTHADFKK 429
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 123/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A+E+AP+I+FIDE+DA+ T R+D+ +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 265 LVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 324
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F +M L+++V+L + +
Sbjct: 325 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIM 384
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D +S A+I AIC EAG+ A+R+ R + +DF+K
Sbjct: 385 AKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
>sp|Q9SZD4|PRS4A_ARATH 26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis
thaliana GN=RPT2A PE=2 SV=1
Length = 443
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 122/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 269 LVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDV 328
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ M LS++V+LE++V
Sbjct: 329 KVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVM 388
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D+ S A+I AIC EAG+ A+R+ R + DF+K
Sbjct: 389 TKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKK 424
>sp|Q9SL67|PRS4B_ARATH 26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis
thaliana GN=RPT2B PE=2 SV=1
Length = 443
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 122/156 (78%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A + +P+I+FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 269 LVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDV 328
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ M L+++V+LE++V
Sbjct: 329 KVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVM 388
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D+ S A+I AIC EAG+ A+R+ R + DF+K
Sbjct: 389 TKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKK 424
>sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT2 PE=1
SV=3
Length = 437
Score = 172 bits (437), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 117/156 (75%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+ R +F++A ENAP+I+FIDE+DAI T R+D+ +G +RE+QR ++ELLNQ+DGFD +V
Sbjct: 263 LCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDV 322
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATN+ +TLDPAL+RPGR+DRKI F PD K+ + +MNLS++V+LE V+
Sbjct: 323 KVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVT 382
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
D +S A+I A+C EAG+ A+R+ R + +DF++
Sbjct: 383 TKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQ 418
>sp|Q54PN7|PRS6A_DICDI 26S protease regulatory subunit 6A homolog OS=Dictyostelium
discoideum GN=psmC3 PE=1 SV=1
Length = 421
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F LAKE P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF N+
Sbjct: 249 LVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANI 308
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNR D LDPALLR GRLDRKIEFPLP+ + + Q MN+S +V+ ++
Sbjct: 309 KVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELAR 368
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
+ + A++ A+C EAGM A+R+ ++ DF +G + K E+Y
Sbjct: 369 SSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKKKKTLEYY 420
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 115/164 (70%), Gaps = 5/164 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++F +A+E+AP+IIF+DE+D+I + R D+ G+D EVQR ++ELLNQ+DGF+ N+
Sbjct: 277 LVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNI 336
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR D LDPALLR GR+DRKIEFP P+ + + +MNL+ +DLE S
Sbjct: 337 KVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIAS 396
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKK 159
+ S AE+ A+C EAGM+A+R+ R + +DFE +KK
Sbjct: 397 KMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKVLKK 440
>sp|O88685|PRS6A_MOUSE 26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=1
SV=2
Length = 442
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F LAKE AP+IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF V
Sbjct: 270 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQV 329
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q MN+S +V+ E+
Sbjct: 330 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 389
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A+ A+C EAGM A+R+ + +D+ +G K + ++Y
Sbjct: 390 CTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 441
>sp|P17980|PRS6A_HUMAN 26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1
SV=3
Length = 439
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F LAKE AP+IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF V
Sbjct: 267 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQV 326
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q MN+S +V+ E+
Sbjct: 327 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 386
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A+ A+C EAGM A+R+ + +D+ +G K + ++Y
Sbjct: 387 CTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 438
>sp|Q63569|PRS6A_RAT 26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3
PE=2 SV=1
Length = 439
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F LAKE AP+IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF V
Sbjct: 267 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQV 326
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q MN+S +V+ E+
Sbjct: 327 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 386
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A+ A+C EAGM A+R+ + +D+ +G K + ++Y
Sbjct: 387 CTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 438
>sp|D4GUJ7|PAN1_HALVD Proteasome-activating nucleotidase 1 OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=pan1 PE=2 SV=2
Length = 406
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 110/158 (69%), Gaps = 5/158 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD+F +A+EN PA+IFIDE+DAIA+ R D++T D EVQR +M+LL +MDGFD+ N+
Sbjct: 231 LVRDLFEVARENEPAVIFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLAEMDGFDERGNI 290
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
++I ATNR D LDPA+LRPGR DR IE P P+ + ++FQ MN+SD+VD +
Sbjct: 291 RIIAATNRFDMLDPAILRPGRFDRLIEVPKPNEDGREIIFQIHTRKMNVSDDVDFVELAE 350
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGY 153
D S A+I A+C EAGM A+R +R I +DF +
Sbjct: 351 MADNASGADIKAVCTEAGMFAIRDDRTEIFMQDFVDAW 388
>sp|P46465|PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp.
japonica GN=TBP1 PE=2 SV=2
Length = 429
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F+LAKE +P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +
Sbjct: 257 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERI 316
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q MN++ +V+ E+
Sbjct: 317 KVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELAR 376
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A++ A+C EAGM A+R++ + +DF +G K + +Y
Sbjct: 377 STDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYY 428
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 166 bits (420), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 5/156 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+V+D+F+LAKE AP+IIFIDE+DAIA R DA TG DREVQR LM+LL +MDGFD +V
Sbjct: 251 LVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDV 310
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
K+I ATNR D LDPA+LRPGR DR IE P PD + + + +MNL+++V+LE+
Sbjct: 311 KIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAK 370
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 151
+ AE+ AIC EAGM+A+R+ R + DF K
Sbjct: 371 MTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRK 406
>sp|P36612|PRS4_SCHPO 26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mts2 PE=2 SV=1
Length = 448
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 119/167 (71%), Gaps = 6/167 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTV-N 59
+VR +F A+E++P+I+FIDE+DAI T R+DAQ+GA+RE+QR ++ELLNQ+DGFD + +
Sbjct: 272 LVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRD 331
Query: 60 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYV 114
+KVIMATNR LDPAL+RPGR+DRKI F PD KR +F +MNL ++V+LE+ +
Sbjct: 332 IKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELI 391
Query: 115 SRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPD 161
D +S AEI AI EAG+ A+R+ R ++ DF + +K D
Sbjct: 392 QCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKD 438
>sp|O42586|PR6AB_XENLA 26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-b
PE=2 SV=1
Length = 404
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F LAKE AP+IIFIDE+DAI RFD++ DREVQR ++ELLNQ+DGF T V
Sbjct: 232 LVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQV 291
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q MN+S +V+ E+
Sbjct: 292 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 351
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A+ A+C EAG+ A+R+ + +D+ +G K + ++Y
Sbjct: 352 CTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYY 403
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 5/155 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++F +A+E+AP+IIF+DE+D+I ++R ++ +G D EVQR ++ELLNQ+DGF+ T N+
Sbjct: 226 MVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI 285
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR D LDPALLRPGR+DRKIEFP P+ + + +MNL+ ++L
Sbjct: 286 KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 345
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 150
S AE+ +C EAGM+A+R+ R + +DFE
Sbjct: 346 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 380
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 5/155 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++F +A+E+AP+IIF+DE+D+I ++R ++ +G D EVQR ++ELLNQ+DGF+ T N+
Sbjct: 229 MVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI 288
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR D LDPALLRPGR+DRKIEFP P+ + + +MNL+ ++L
Sbjct: 289 KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 348
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 150
S AE+ +C EAGM+A+R+ R + +DFE
Sbjct: 349 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 383
>sp|O23894|PRS6A_BRACM 26S protease regulatory subunit 6A homolog OS=Brassica campestris
GN=TBP1 PE=2 SV=1
Length = 424
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F+LAKE AP IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +
Sbjct: 252 LVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERI 311
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q MN+ +V+ E+
Sbjct: 312 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 371
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A++ A+C EAGM A+R++ + +DF +G K +Y
Sbjct: 372 STDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 423
>sp|Q8SRH0|PRS4_ENCCU 26S protease regulatory subunit 4 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT2 PE=1 SV=1
Length = 424
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 112/154 (72%), Gaps = 5/154 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VR++FR+A +AP+IIFIDE+DAI R++ +G REVQR ++ELLNQ+DGFD ++
Sbjct: 250 LVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSGGRREVQRTMLELLNQLDGFDTRNDI 309
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATN+ + LDPAL+RPGR+DRKIEF +PD K+ +F +M L + V++E ++
Sbjct: 310 KVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLIT 369
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 149
+ +S A+I AIC EAGM A+R+ R + KDF
Sbjct: 370 SKEDLSGADIKAICTEAGMIALRERRKTVTMKDF 403
>sp|Q9SEI2|PS6AA_ARATH 26S protease regulatory subunit 6A homolog A OS=Arabidopsis
thaliana GN=RPT5A PE=2 SV=1
Length = 424
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F+LAKE AP IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +
Sbjct: 252 LVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERI 311
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q MN+ +V+ E+
Sbjct: 312 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELAR 371
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A++ A+C EAGM A+R++ + +DF +G K +Y
Sbjct: 372 STDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 423
>sp|P54776|PRS6A_SOLLC 26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum
GN=TBP1 PE=2 SV=1
Length = 423
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 111/172 (64%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F+LAKE +P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +
Sbjct: 251 LVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q MN++ +V+ E+
Sbjct: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELAR 370
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A++ A+C EAGM A+R++ + +DF +G K +Y
Sbjct: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKASLNYY 422
>sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B OS=Arabidopsis
thaliana GN=RPT4B PE=2 SV=1
Length = 399
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 114/173 (65%), Gaps = 7/173 (4%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
++R++F A+E+ P IIF+DE+DAI RF T ADRE+QR LMELLNQ+DGFDQ V
Sbjct: 220 LIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKV 279
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQMNLS-----DEVDLEDYVS 115
K+IMATNR D LDPALLRPGRLDRKIE PLP+ + + + +++ S E+D E V
Sbjct: 280 KMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVK 339
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR--TNVKKPDTDFEF 166
+ + A++ IC EAGM A+R R ++ +DF K R + KK ++ +
Sbjct: 340 LGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
>sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit 10B OS=Caenorhabditis
elegans GN=rpt-4 PE=1 SV=2
Length = 406
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 115/173 (66%), Gaps = 7/173 (4%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
M+R++F A+++ P I+F+DE+DAI RF T ADRE+QR LMELLNQ+DGFD V
Sbjct: 231 MIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKV 290
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQMNLS-----DEVDLEDYVS 115
KVIMATNR DTLDPALLRPGRLDRKIE LP+ + + + +++ + E+D E V
Sbjct: 291 KVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVK 350
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR--TNVKKPDTDFEF 166
D SAA++ +C EAGM A+R R ++ +DF K R + K+ +T ++
Sbjct: 351 LSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++F +A+E+AP+IIF+DE+D+I + R + G D EVQR ++ELLNQ+DGF+ + N+
Sbjct: 229 MVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNI 288
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
K+IMATNR D LDPALLRPGR+DRKIEFP P + + +MNL+ ++L
Sbjct: 289 KIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAE 348
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 150
+ + S A++ +C EAGM+A+R+ R + +DFE
Sbjct: 349 KMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 383
>sp|O04019|PS6AB_ARATH 26S protease regulatory subunit 6A homolog B OS=Arabidopsis
thaliana GN=RPT5B PE=1 SV=3
Length = 423
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 5/172 (2%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
+VRD F LAKE +P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +
Sbjct: 251 LVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRI 310
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-----MNLSDEVDLEDYVS 115
KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q MN++ +V+ E+
Sbjct: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELAR 370
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 167
D + A++ A+C EAGM A+R++ + +DF +G K +Y
Sbjct: 371 STDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 422
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+
Sbjct: 230 MVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 289
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + +MNL+ ++L
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 349
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 150
S AE+ +C EAGM+A+R+ R + +DFE
Sbjct: 350 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+
Sbjct: 230 MVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 289
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + +MNL+ ++L
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 349
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 150
S AE+ +C EAGM+A+R+ R + +DFE
Sbjct: 350 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+
Sbjct: 230 MVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 289
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + +MNL+ ++L
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 349
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 150
S AE+ +C EAGM+A+R+ R + +DFE
Sbjct: 350 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 1 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 60
MVR++F +A+E+AP+IIF+DE+D+I ++R + +G D EVQR ++ELLNQ+DGF+ T N+
Sbjct: 230 MVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 289
Query: 61 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF-----QMNLSDEVDLEDYVS 115
KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + +MNL+ ++L
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAE 349
Query: 116 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 150
S AE+ +C EAGM+A+R+ R + +DFE
Sbjct: 350 LMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,322,855
Number of Sequences: 539616
Number of extensions: 2221558
Number of successful extensions: 7979
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 6702
Number of HSP's gapped (non-prelim): 733
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)