Your job contains 1 sequence.
>030962
MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC
KKHVEVPTTQDSNTSGANSNGAATNGGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKG
LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030962
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165825 - symbol:ASK2 "AT5G42190" species:3702... 611 1.3e-59 1
TAIR|locus:2204435 - symbol:SKP1 "AT1G75950" species:3702... 588 3.6e-57 1
TAIR|locus:2198621 - symbol:SK4 "AT1G20140" species:3702 ... 546 1.0e-52 1
TAIR|locus:2050281 - symbol:SK3 "AT2G25700" species:3702 ... 533 2.4e-51 1
TAIR|locus:2124281 - symbol:SK11 "AT4G34210" species:3702... 499 9.8e-48 1
TAIR|locus:2139504 - symbol:SK12 "AT4G34470" species:3702... 491 6.9e-47 1
TAIR|locus:2056956 - symbol:SK14 "AT2G03170" species:3702... 265 9.6e-44 2
TAIR|locus:2080532 - symbol:SK13 "AT3G60010" species:3702... 451 1.2e-42 1
TAIR|locus:2056966 - symbol:SK19 "AT2G03160" species:3702... 232 7.5e-42 2
TAIR|locus:2093084 - symbol:SK9 "AT3G21850" species:3702 ... 435 5.9e-41 1
TAIR|locus:2093094 - symbol:SK10 "AT3G21860" species:3702... 434 7.5e-41 1
TAIR|locus:2056931 - symbol:SK16 "AT2G03190" species:3702... 430 2.0e-40 1
TAIR|locus:2102370 - symbol:SK15 "AT3G25650" species:3702... 429 2.6e-40 1
ZFIN|ZDB-GENE-040426-1707 - symbol:skp1 "S-phase kinase-a... 397 6.3e-37 1
UNIPROTKB|Q5ZKF5 - symbol:SKP1 "S-phase kinase-associated... 396 8.0e-37 1
UNIPROTKB|Q3ZCF3 - symbol:SKP1 "S-phase kinase-associated... 396 8.0e-37 1
UNIPROTKB|P63208 - symbol:SKP1 "S-phase kinase-associated... 396 8.0e-37 1
UNIPROTKB|P63209 - symbol:SKP1 "S-phase kinase-associated... 396 8.0e-37 1
UNIPROTKB|Q4R5B9 - symbol:SKP1 "S-phase kinase-associated... 396 8.0e-37 1
UNIPROTKB|Q5R512 - symbol:SKP1 "S-phase kinase-associated... 396 8.0e-37 1
UNIPROTKB|Q71U00 - symbol:skp1 "S-phase kinase-associated... 396 8.0e-37 1
MGI|MGI:103575 - symbol:Skp1a "S-phase kinase-associated ... 396 8.0e-37 1
RGD|1359648 - symbol:Skp1 "S-phase kinase-associated prot... 396 8.0e-37 1
UNIPROTKB|E2RRW0 - symbol:SKP1 "Uncharacterized protein" ... 394 1.3e-36 1
DICTYBASE|DDB_G0269230 - symbol:fpaA "ubiquitin ligase su... 392 2.1e-36 1
DICTYBASE|DDB_G0273615 - symbol:fpaB-2 "ubiquitin ligase ... 389 4.4e-36 1
DICTYBASE|DDB_G0273251 - symbol:fpaB-1 "ubiquitin ligase ... 389 4.4e-36 1
UNIPROTKB|F8W8N3 - symbol:SKP1 "S-phase kinase-associated... 381 3.1e-35 1
TAIR|locus:2061709 - symbol:MEO "AT2G20160" species:3702 ... 203 1.1e-33 2
FB|FBgn0025637 - symbol:skpA "skpA" species:7227 "Drosoph... 364 2.0e-33 1
UNIPROTKB|G3MZV0 - symbol:G3MZV0 "Uncharacterized protein... 361 4.1e-33 1
UNIPROTKB|E7ERH2 - symbol:SKP1 "S-phase kinase-associated... 358 8.5e-33 1
ASPGD|ASPL0000044827 - symbol:sconC species:162425 "Emeri... 357 1.1e-32 1
UNIPROTKB|G4N3J5 - symbol:MGG_04978 "E3 ubiquitin ligase ... 347 1.3e-31 1
FB|FBgn0026176 - symbol:skpB "skpB" species:7227 "Drosoph... 346 1.6e-31 1
WB|WBGene00004807 - symbol:skr-1 species:6239 "Caenorhabd... 345 2.0e-31 1
UNIPROTKB|G5ECU1 - symbol:skr-1 "Protein SKR-1" species:6... 345 2.0e-31 1
TAIR|locus:2093064 - symbol:SK8 "AT3G21830" species:3702 ... 342 4.2e-31 1
UNIPROTKB|E5RJR5 - symbol:SKP1 "S-phase kinase-associated... 338 1.1e-30 1
POMBASE|SPBC409.05 - symbol:skp1 "SCF ubiquitin ligase co... 332 4.9e-30 1
CGD|CAL0001786 - symbol:SKP1 species:5476 "Candida albica... 328 1.3e-29 1
SGD|S000002736 - symbol:SKP1 "Evolutionarily conserved ki... 275 4.1e-28 2
WB|WBGene00004808 - symbol:skr-2 species:6239 "Caenorhabd... 303 5.7e-27 1
UNIPROTKB|G5EDD8 - symbol:skr-2 "SKR-2" species:6239 "Cae... 303 5.7e-27 1
FB|FBgn0034863 - symbol:skpF "skpF" species:7227 "Drosoph... 294 5.2e-26 1
WB|WBGene00004809 - symbol:skr-3 species:6239 "Caenorhabd... 292 8.4e-26 1
FB|FBgn0026175 - symbol:skpC "skpC" species:7227 "Drosoph... 286 3.6e-25 1
TAIR|locus:2093074 - symbol:SK7 "AT3G21840" species:3702 ... 265 7.1e-25 2
TAIR|locus:2085201 - symbol:SK6 "AT3G53060" species:3702 ... 157 3.9e-24 2
WB|WBGene00004810 - symbol:skr-4 species:6239 "Caenorhabd... 272 1.1e-23 1
FB|FBgn0026174 - symbol:skpD "skpD" species:7227 "Drosoph... 269 2.3e-23 1
WB|WBGene00004811 - symbol:skr-5 species:6239 "Caenorhabd... 258 3.4e-22 1
TAIR|locus:2080542 - symbol:SK5 "AT3G60020" species:3702 ... 257 4.3e-22 1
WB|WBGene00004816 - symbol:skr-10 species:6239 "Caenorhab... 239 3.5e-20 1
WB|WBGene00004814 - symbol:skr-8 species:6239 "Caenorhabd... 238 4.4e-20 1
WB|WBGene00004813 - symbol:skr-7 species:6239 "Caenorhabd... 235 9.2e-20 1
WB|WBGene00004812 - symbol:skr-6 species:6239 "Caenorhabd... 185 1.9e-19 2
WB|WBGene00004815 - symbol:skr-9 species:6239 "Caenorhabd... 227 6.5e-19 1
WB|WBGene00004818 - symbol:skr-12 species:6239 "Caenorhab... 220 3.6e-18 1
WB|WBGene00004819 - symbol:skr-13 species:6239 "Caenorhab... 216 9.5e-18 1
FB|FBgn0031074 - symbol:skpE "skpE" species:7227 "Drosoph... 212 2.5e-17 1
WB|WBGene00004820 - symbol:skr-14 species:6239 "Caenorhab... 210 4.1e-17 1
WB|WBGene00004822 - symbol:skr-16 species:6239 "Caenorhab... 129 3.0e-14 2
WB|WBGene00004823 - symbol:skr-17 species:6239 "Caenorhab... 178 1.0e-13 1
UNIPROTKB|E5RGM3 - symbol:SKP1 "S-phase kinase-associated... 174 2.7e-13 1
WB|WBGene00004821 - symbol:skr-15 species:6239 "Caenorhab... 150 9.4e-11 1
TAIR|locus:505006407 - symbol:SK21 "AT3G61415" species:37... 153 1.9e-10 1
WB|WBGene00004826 - symbol:skr-20 species:6239 "Caenorhab... 141 8.4e-10 1
UNIPROTKB|G5EE98 - symbol:skr-20 "Protein SKR-20" species... 141 8.4e-10 1
TAIR|locus:2050709 - symbol:SK20 "AT2G45950" species:3702... 146 1.2e-09 1
WB|WBGene00004827 - symbol:skr-21 species:6239 "Caenorhab... 118 2.3e-07 1
WB|WBGene00018935 - symbol:skr-18 species:6239 "Caenorhab... 118 2.3e-07 1
UNIPROTKB|E5RI56 - symbol:SKP1 "S-phase kinase-associated... 107 3.4e-06 1
SGD|S000005967 - symbol:ELC1 "Elongin C, conserved among ... 73 3.8e-05 2
DICTYBASE|DDB_G0284889 - symbol:DDB_G0284889 species:4468... 92 0.00024 2
FB|FBgn0034904 - symbol:CG15800 species:7227 "Drosophila ... 95 0.00074 1
WB|WBGene00004825 - symbol:skr-19 species:6239 "Caenorhab... 94 0.00098 1
>TAIR|locus:2165825 [details] [associations]
symbol:ASK2 "AT5G42190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;RCA;TAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0019048 GO:GO:0007059 GO:GO:0009734
GO:GO:0009873 GO:GO:0009793 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB017067 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.23304 OMA:KNWDADF EMBL:U97021 EMBL:AF059295
EMBL:BT004798 EMBL:AK227773 IPI:IPI00540947 RefSeq:NP_568603.1
UniGene:At.71056 ProteinModelPortal:Q9FHW7 SMR:Q9FHW7
DIP:DIP-31326N IntAct:Q9FHW7 STRING:Q9FHW7 PaxDb:Q9FHW7
PRIDE:Q9FHW7 EnsemblPlants:AT5G42190.1 GeneID:834224
KEGG:ath:AT5G42190 GeneFarm:4982 TAIR:At5g42190 InParanoid:Q9FHW7
PhylomeDB:Q9FHW7 ProtClustDB:CLSN2917730 Genevestigator:Q9FHW7
GermOnline:AT5G42190 Uniprot:Q9FHW7
Length = 171
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 119/172 (69%), Positives = 132/172 (76%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MS+ + I LKS DGE+FE++EAVALES TIKHMIEDDC DNGIPLPNVT KIL+KV+EYC
Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 61 KKHVEVP----TTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYL 116
K+HVE TT D +EDLK+WD++F+KVDQ TLFDLILAANYL
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSS-DEDLKTWDSEFIKVDQGTLFDLILAANYL 119
Query: 117 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP NQWAFE
Sbjct: 120 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
>TAIR|locus:2204435 [details] [associations]
symbol:SKP1 "AT1G75950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007140 "male meiosis" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IMP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0007067 "mitosis" evidence=RCA;TAS] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0046686 GO:GO:0019048
GO:GO:0007059 GO:GO:0000226 GO:GO:0009734 GO:GO:0009873
GO:GO:0005819 EMBL:AC007396 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0009524 GO:GO:0045910
PDB:3OGK PDB:3OGL PDB:3OGM PDBsum:3OGK PDBsum:3OGL PDBsum:3OGM
PDB:2P1N PDB:2P1O PDB:2P1Q PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q
EMBL:U60981 EMBL:U97020 EMBL:AF059294 EMBL:AY080884 EMBL:AY113971
EMBL:U70034 IPI:IPI00540205 PIR:T51309 RefSeq:NP_565123.1
UniGene:At.23531 PDB:2P1M PDB:2P1P PDB:3C6N PDB:3C6O PDB:3C6P
PDBsum:2P1M PDBsum:2P1P PDBsum:3C6N PDBsum:3C6O PDBsum:3C6P
ProteinModelPortal:Q39255 SMR:Q39255 DIP:DIP-31325N IntAct:Q39255
STRING:Q39255 PaxDb:Q39255 PRIDE:Q39255 EnsemblPlants:AT1G75950.1
GeneID:843928 KEGG:ath:AT1G75950 GeneFarm:4981 TAIR:At1g75950
InParanoid:Q39255 OMA:DDLKAWD PhylomeDB:Q39255
EvolutionaryTrace:Q39255 Genevestigator:Q39255 GermOnline:AT1G75950
Uniprot:Q39255
Length = 160
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 115/166 (69%), Positives = 127/166 (76%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK 62
S K IVLKS DGESFEVEEAVALES TI HM+EDDC DNG+PLPNVT KILAKV+EYCK+
Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61
Query: 63 HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLL 122
HVE ++ ++DLK+WD DF+K+DQATLF+LILAANYLNIK LL
Sbjct: 62 HVEAAASK-------AEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLL 114
Query: 123 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
DLTCQTVADMIKGKTPEEIR TFNIKNDFTP NQWAFE
Sbjct: 115 DLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
>TAIR|locus:2198621 [details] [associations]
symbol:SK4 "AT1G20140" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005730
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 EMBL:AC022472 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.26484 ProtClustDB:CLSN2687877 EMBL:AY058205
EMBL:AY098980 IPI:IPI00526578 PIR:B86335 RefSeq:NP_564105.1
UniGene:At.26612 ProteinModelPortal:Q9LNT9 SMR:Q9LNT9 IntAct:Q9LNT9
STRING:Q9LNT9 PRIDE:Q9LNT9 EnsemblPlants:AT1G20140.1 GeneID:838604
KEGG:ath:AT1G20140 TAIR:At1g20140 InParanoid:Q9LNT9 OMA:SAENDEL
Genevestigator:Q9LNT9 Uniprot:Q9LNT9
Length = 163
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 106/164 (64%), Positives = 123/164 (75%)
Query: 5 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHV 64
KMI+LKS DGESFE+EEAVA++S TIKHMIEDDCADNGIPLPNVTG ILAKV+EYCKKHV
Sbjct: 6 KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHV 65
Query: 65 EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDL 124
E ++LK+WD++FVKVDQ TLFDLILAANYLNI GLLDL
Sbjct: 66 EA------AAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDL 119
Query: 125 TCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
TC+ VAD ++GKTPE++R FNIKND+TP N+WAFE
Sbjct: 120 TCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
>TAIR|locus:2050281 [details] [associations]
symbol:SK3 "AT2G25700" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006053
EMBL:AY052700 EMBL:AY139806 IPI:IPI00526397 PIR:F84651
RefSeq:NP_565604.1 UniGene:At.26484 ProteinModelPortal:Q9SL93
SMR:Q9SL93 IntAct:Q9SL93 STRING:Q9SL93 EnsemblPlants:AT2G25700.1
GeneID:817111 KEGG:ath:AT2G25700 TAIR:At2g25700 InParanoid:Q9SL93
OMA:CCKTIAN ProtClustDB:CLSN2687877 Genevestigator:Q9SL93
Uniprot:Q9SL93
Length = 163
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 104/164 (63%), Positives = 118/164 (71%)
Query: 5 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHV 64
KMI+LKS DGESFEVEEAVA+ES TIKHMIEDDC DNGIPLPNVTG ILAKV+EYCKKHV
Sbjct: 6 KMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHV 65
Query: 65 EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDL 124
E +LK+WD DFVKVD TLFDL+ AANYLNI GLLDL
Sbjct: 66 EA------AAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDL 119
Query: 125 TCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
TC+ VAD ++GKTP ++R+ FNIKND+TP N+WAFE
Sbjct: 120 TCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
>TAIR|locus:2124281 [details] [associations]
symbol:SK11 "AT4G34210" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL021961
EMBL:AL161585 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446893 EMBL:DQ653243 IPI:IPI00541308
PIR:T05415 RefSeq:NP_567959.1 UniGene:At.54598
ProteinModelPortal:O49484 SMR:O49484 IntAct:O49484 STRING:O49484
EnsemblPlants:AT4G34210.1 GeneID:829569 KEGG:ath:AT4G34210
TAIR:At4g34210 InParanoid:O49484 OMA:HHVDEAN PhylomeDB:O49484
ProtClustDB:CLSN2689755 Genevestigator:O49484 Uniprot:O49484
Length = 152
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 105/168 (62%), Positives = 119/168 (70%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MSS KMIVL S DG+SFEVEEAVA++S TI HM+EDDC +GIPL NV KIL KV+EYC
Sbjct: 1 MSS-KMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYC 59
Query: 61 KKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKG 120
KKH V EEDL +WD F+ ++Q+T+F+LILAANYLNIK
Sbjct: 60 KKH-HVDEANPIS--------------EEDLNNWDEKFMDLEQSTIFELILAANYLNIKS 104
Query: 121 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LLDLTCQTVADMIKGKTPEEIR TFNI+NDFTP NQWAFE
Sbjct: 105 LLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>TAIR|locus:2139504 [details] [associations]
symbol:SK12 "AT4G34470" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL161585
EMBL:AL023094 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 ProtClustDB:CLSN2689755 IPI:IPI00526402 PIR:T05267
RefSeq:NP_567967.1 UniGene:At.65453 ProteinModelPortal:O65674
SMR:O65674 IntAct:O65674 STRING:O65674 EnsemblPlants:AT4G34470.1
GeneID:829598 KEGG:ath:AT4G34470 TAIR:At4g34470 InParanoid:O65674
OMA:IRRAFNI PhylomeDB:O65674 Genevestigator:O65674 Uniprot:O65674
Length = 152
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 104/169 (61%), Positives = 118/169 (69%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MSS KMIVL S DG+SFEVEEAVA++S TI HM+EDDC +GIPL NV KIL KV+EYC
Sbjct: 1 MSS-KMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYC 59
Query: 61 KK-HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIK 119
KK HV+ EEDL WD F+ ++Q+T+F+LILAANYLNIK
Sbjct: 60 KKYHVDEANP----------------ISEEDLNKWDEKFMDLEQSTIFELILAANYLNIK 103
Query: 120 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
L DLTCQTVADMIKGKTPEEIR TFNI+NDFTP NQWAFE
Sbjct: 104 SLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>TAIR|locus:2056956 [details] [associations]
symbol:SK14 "AT2G03170" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056526 IPI:IPI00517714 PIR:T02709 RefSeq:NP_565296.1
UniGene:At.52615 ProteinModelPortal:O81057 SMR:O81057 IntAct:O81057
STRING:O81057 PaxDb:O81057 PRIDE:O81057 EnsemblPlants:AT2G03170.1
GeneID:814846 KEGG:ath:AT2G03170 TAIR:At2g03170 InParanoid:O81057
OMA:KTWDEEF PhylomeDB:O81057 ProtClustDB:CLSN2687939
Genevestigator:O81057 Uniprot:O81057
Length = 149
Score = 265 (98.3 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 51/81 (62%), Positives = 61/81 (75%)
Query: 89 EDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNI 147
++ K+WD +F+K DQ T+F L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI
Sbjct: 69 DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNI 128
Query: 148 KNDFTPXXXXXXXXXNQWAFE 168
+NDFTP N WAFE
Sbjct: 129 ENDFTPEEEAAVRKENAWAFE 149
Score = 213 (80.0 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MSS K IVL S DGESFEVEEAVA + ++HMIEDDC +PL NVTGKIL+ VVEYC
Sbjct: 1 MSSNK-IVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYC 59
Query: 61 KKHV 64
KKHV
Sbjct: 60 KKHV 63
>TAIR|locus:2080532 [details] [associations]
symbol:SK13 "AT3G60010" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 IPI:IPI00542124 PIR:T47825 RefSeq:NP_567090.1
UniGene:At.65295 ProteinModelPortal:Q9M1X5 SMR:Q9M1X5 IntAct:Q9M1X5
STRING:Q9M1X5 PaxDb:Q9M1X5 PRIDE:Q9M1X5 EnsemblPlants:AT3G60010.1
GeneID:825171 KEGG:ath:AT3G60010 TAIR:At3g60010 InParanoid:Q9M1X5
OMA:AVQSQTI PhylomeDB:Q9M1X5 ProtClustDB:CLSN2917465
Genevestigator:Q9M1X5 Uniprot:Q9M1X5
Length = 154
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 95/168 (56%), Positives = 118/168 (70%)
Query: 5 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHV 64
KM++L S DGESF+VEEAVA++S TI HMIEDDC NG+P+ NVTG IL+KV+EYCKKHV
Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHV 62
Query: 65 --EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQA-TLFDLILAANYLNIKG 120
+ PT + +++LK WD +F+K ++Q+ TLFD++LAANYLNIK
Sbjct: 63 VSDSPTEES----------------KDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKD 106
Query: 121 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LLDL CQTVADMI GK P+EIR I+NDFTP NQWAFE
Sbjct: 107 LLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
>TAIR|locus:2056966 [details] [associations]
symbol:SK19 "AT2G03160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056525 IPI:IPI00531321 PIR:T02710 RefSeq:NP_565295.1
UniGene:At.52614 ProteinModelPortal:O81058 SMR:O81058 IntAct:O81058
STRING:O81058 PaxDb:O81058 PRIDE:O81058 EnsemblPlants:AT2G03160.1
GeneID:814845 KEGG:ath:AT2G03160 TAIR:At2g03160 InParanoid:O81058
OMA:VVETHES PhylomeDB:O81058 ProtClustDB:CLSN2917045
Genevestigator:O81058 Uniprot:O81058
Length = 200
Score = 232 (86.7 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 88 EEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFN 146
+E L WD F+K D T+FD+ILAANYLN++GL DL +T+AD IK TPEE+R+ FN
Sbjct: 109 KEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFN 168
Query: 147 IKNDFTPXXXXXXXXXNQWAFE 168
I+NDFTP N W FE
Sbjct: 169 IENDFTPEEEEAIRNENAWTFE 190
Score = 228 (85.3 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 46/65 (70%), Positives = 53/65 (81%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MSS K IVL S DGESF+VEE VA + + H+IEDDCA N IP+PNVTG+ILAKV+EYC
Sbjct: 1 MSSKK-IVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYC 59
Query: 61 KKHVE 65
KKHVE
Sbjct: 60 KKHVE 64
>TAIR|locus:2093084 [details] [associations]
symbol:SK9 "AT3G21850" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0007346 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
EMBL:AB025634 GO:GO:0006511 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446683 EMBL:DQ653099 IPI:IPI00543724
RefSeq:NP_566694.1 UniGene:At.70382 ProteinModelPortal:Q9LSX9
SMR:Q9LSX9 IntAct:Q9LSX9 STRING:Q9LSX9 PaxDb:Q9LSX9 PRIDE:Q9LSX9
EnsemblPlants:AT3G21850.1 GeneID:821739 KEGG:ath:AT3G21850
TAIR:At3g21850 InParanoid:Q9LSX9 OMA:ARQCQII Genevestigator:Q9LSX9
Uniprot:Q9LSX9
Length = 153
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 91/167 (54%), Positives = 108/167 (64%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALE-STTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCK 61
S K I+LKS DG SFEVEE A + I HM E+DC DNGIPLPNVTGKILA V+EYC
Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCN 61
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
KH V ++DLK WD +F++ D +T+FDLI AANYLNIK L
Sbjct: 62 KH-HVDAANPCS--------------DDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSL 106
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
DL CQTVA++IKG TPE+IR+ FNI+ND TP N+WAFE
Sbjct: 107 FDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
>TAIR|locus:2093094 [details] [associations]
symbol:SK10 "AT3G21860" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 EMBL:DQ056602 IPI:IPI00548110
RefSeq:NP_566695.1 UniGene:At.70381 HSSP:P63208
ProteinModelPortal:Q9LSX8 SMR:Q9LSX8 IntAct:Q9LSX8 STRING:Q9LSX8
EnsemblPlants:AT3G21860.1 GeneID:821740 KEGG:ath:AT3G21860
TAIR:At3g21860 eggNOG:COG5201 HOGENOM:HOG000172184
InParanoid:Q9LSX8 KO:K03094 OMA:IFDLIMA ProtClustDB:CLSN2688652
Genevestigator:Q9LSX8 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 Uniprot:Q9LSX8
Length = 152
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 92/166 (55%), Positives = 104/166 (62%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK 62
S K I+LKS DG SFEVEE A + TI HM EDDC DNGIPLP VTGKIL V+EYC K
Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNK 61
Query: 63 HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLL 122
H V +EDLK WD +F++ Q+T+FDLI+AANYLNIK LL
Sbjct: 62 H-HVDAANPCS--------------DEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLL 106
Query: 123 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
DL CQTVADMIK T E RK FNI+ND+T NQW FE
Sbjct: 107 DLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
>TAIR|locus:2056931 [details] [associations]
symbol:SK16 "AT2G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:AC005313 EMBL:BT015070 EMBL:BT015726
IPI:IPI00519862 PIR:T02707 RefSeq:NP_565297.1 UniGene:At.50066
ProteinModelPortal:O81055 SMR:O81055 IntAct:O81055 STRING:O81055
PaxDb:O81055 PRIDE:O81055 EnsemblPlants:AT2G03190.1 GeneID:814848
KEGG:ath:AT2G03190 TAIR:At2g03190 InParanoid:O81055 OMA:CADKAIP
PhylomeDB:O81055 ProtClustDB:CLSN2917046 Genevestigator:O81055
Uniprot:O81055
Length = 170
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 89/169 (52%), Positives = 108/169 (63%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MSS K IVL S D ESFEVEEAVA + I HMI+DDCAD IPL NVTG ILA V+EYC
Sbjct: 1 MSSNK-IVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYC 59
Query: 61 KKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIK 119
KKHV + D + +L++WD +F+K D T+ LILA NYLN++
Sbjct: 60 KKHV-LDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQ 118
Query: 120 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LL LTCQTVAD +K +PEE+R+ FNI+ND+TP N WAFE
Sbjct: 119 DLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
>TAIR|locus:2102370 [details] [associations]
symbol:SK15 "AT3G25650" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 EMBL:AP001313 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446700 IPI:IPI00519031 IPI:IPI00759250
RefSeq:NP_566773.1 UniGene:At.66493 ProteinModelPortal:Q1PEL7
SMR:Q1PEL7 IntAct:Q1PEL7 STRING:Q1PEL7 EnsemblPlants:AT3G25650.1
GeneID:822152 KEGG:ath:AT3G25650 TAIR:At3g25650 OMA:ENDFTHE
PhylomeDB:Q1PEL7 Genevestigator:Q1PEL7 Uniprot:Q1PEL7
Length = 177
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 91/170 (53%), Positives = 112/170 (65%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MSS K IVL S DGESF+VEE VA + +KH++EDDC N IPL NVTG IL+ V+EYC
Sbjct: 1 MSSNK-IVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYC 59
Query: 61 KKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIK 119
KKHV+ D +++L +WD +F+K +D T+F LILAANYLN++
Sbjct: 60 KKHVD--DVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVE 117
Query: 120 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT-PXXXXXXXXXNQWAFE 168
GLL LTCQTVAD IK KTPEE+R+ FNI+NDFT N WAFE
Sbjct: 118 GLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
>ZFIN|ZDB-GENE-040426-1707 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 ZFIN:ZDB-GENE-040426-1707
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0016301
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:KNWDADF CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:FP017197 EMBL:BC059536
EMBL:AY648843 IPI:IPI00501108 RefSeq:NP_957037.1 UniGene:Dr.83245
SMR:Q6PBY8 STRING:Q6PBY8 Ensembl:ENSDART00000008454 GeneID:393716
KEGG:dre:393716 InParanoid:Q6PBY8 NextBio:20814718 Uniprot:Q6PBY8
Length = 163
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|Q5ZKF5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9031 "Gallus gallus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 OMA:VIQWCTY CTD:6500
GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008 OrthoDB:EOG498V26
EMBL:AJ720129 IPI:IPI00591045 RefSeq:NP_001006153.1
UniGene:Gga.1718 ProteinModelPortal:Q5ZKF5 SMR:Q5ZKF5 STRING:Q5ZKF5
PRIDE:Q5ZKF5 Ensembl:ENSGALT00000010461 GeneID:416319
KEGG:gga:416319 InParanoid:Q5ZKF5 NextBio:20819793 Uniprot:Q5ZKF5
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|Q3ZCF3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9913 "Bos taurus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY EMBL:BT029901 EMBL:BC102435 IPI:IPI00699118
RefSeq:NP_001029953.1 UniGene:Bt.87240 ProteinModelPortal:Q3ZCF3
SMR:Q3ZCF3 STRING:Q3ZCF3 PRIDE:Q3ZCF3 Ensembl:ENSBTAT00000035306
GeneID:615427 KEGG:bta:615427 CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 InParanoid:Q3ZCF3 OrthoDB:EOG498V26
NextBio:20899611 Uniprot:Q3ZCF3
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|P63208 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0035518
"histone H2A monoubiquitination" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0016032 EMBL:CH471062
GO:GO:0000082 GO:GO:0007219 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0000080 GO:GO:0035518 Reactome:REACT_24941
GO:GO:0031146 PDB:2AST PDBsum:2AST PDB:2ASS PDBsum:2ASS PDB:1P22
PDBsum:1P22 PDB:1LDK PDBsum:1LDK PDB:2E31 PDB:2E32 PDBsum:2E31
PDBsum:2E32 PDB:3L2O PDBsum:3L2O PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR OMA:VIQWCTY CTD:6500
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:U33760 EMBL:Z47087
EMBL:BC009839 EMBL:BC020798 EMBL:BC025673 EMBL:BC065730 EMBL:U37558
IPI:IPI00172421 IPI:IPI00301364 PIR:I39170 RefSeq:NP_008861.2
RefSeq:NP_733779.1 UniGene:Hs.171626 PDB:1FQV PDB:1FS1 PDB:1FS2
PDBsum:1FQV PDBsum:1FS1 PDBsum:1FS2 ProteinModelPortal:P63208
SMR:P63208 DIP:DIP-31606N IntAct:P63208 MINT:MINT-5001195
STRING:P63208 PhosphoSite:P63208 DMDM:52783797 SWISS-2DPAGE:P63208
PaxDb:P63208 PeptideAtlas:P63208 PRIDE:P63208 DNASU:6500
Ensembl:ENST00000353411 Ensembl:ENST00000517625
Ensembl:ENST00000522552 Ensembl:ENST00000522855 GeneID:6500
KEGG:hsa:6500 UCSC:uc003kzc.4 UCSC:uc003kzd.4 GeneCards:GC05M133521
H-InvDB:HIX0129723 HGNC:HGNC:10899 HPA:CAB012982 MIM:601434
neXtProt:NX_P63208 PharmGKB:PA162403424 InParanoid:P63208
PhylomeDB:P63208 ChiTaRS:SKP1 EvolutionaryTrace:P63208
GenomeRNAi:6500 NextBio:25267 ArrayExpress:P63208 Bgee:P63208
CleanEx:HS_SKP1 Genevestigator:P63208 GermOnline:ENSG00000113558
Uniprot:P63208
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|P63209 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:10141 "Cavia porcellus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
eggNOG:COG5201 HOGENOM:HOG000172184 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
CTD:6500 HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:Z35481
PIR:A57630 RefSeq:NP_001166486.1 ProteinModelPortal:P63209
SMR:P63209 MINT:MINT-108497 STRING:P63209 PRIDE:P63209
GeneID:100135616 InParanoid:P63209 Uniprot:P63209
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|Q4R5B9 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9541 "Macaca fascicularis" [GO:0005829 "cytosol"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005829 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 HSSP:P63208 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
HOVERGEN:HBG057008 EMBL:AB169346 EMBL:AB169625
ProteinModelPortal:Q4R5B9 SMR:Q4R5B9 PRIDE:Q4R5B9 Uniprot:Q4R5B9
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|Q5R512 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9601 "Pongo abelii" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
HSSP:P63208 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146 OMA:VIQWCTY
CTD:6500 GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008
EMBL:CR860371 EMBL:CR861073 RefSeq:NP_001127637.1 UniGene:Pab.18558
ProteinModelPortal:Q5R512 SMR:Q5R512 PRIDE:Q5R512
Ensembl:ENSPPYT00000018360 GeneID:100174716 KEGG:pon:100174716
InParanoid:Q5R512 Uniprot:Q5R512
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|Q71U00 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 CTD:6500 HOVERGEN:HBG057008 EMBL:AF176352
EMBL:AF169342 EMBL:BC054184 RefSeq:NP_001080844.1 UniGene:Xl.57174
ProteinModelPortal:Q71U00 SMR:Q71U00 IntAct:Q71U00 PRIDE:Q71U00
GeneID:380538 KEGG:xla:380538 Xenbase:XB-GENE-919643 Uniprot:Q71U00
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>MGI|MGI:103575 [details] [associations]
symbol:Skp1a "S-phase kinase-associated protein 1A"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO;IC] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO;IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=ISO]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
MGI:MGI:103575 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519
GO:GO:0031146 OMA:VIQWCTY GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 ChiTaRS:SKP1 EMBL:AF083214
EMBL:AK002983 EMBL:AK010628 EMBL:AK012498 EMBL:AK014245
EMBL:AK027909 EMBL:AK078330 EMBL:AK088339 EMBL:BC002115
IPI:IPI00331163 RefSeq:NP_035673.3 UniGene:Mm.42944
ProteinModelPortal:Q9WTX5 SMR:Q9WTX5 IntAct:Q9WTX5 STRING:Q9WTX5
PhosphoSite:Q9WTX5 REPRODUCTION-2DPAGE:Q9WTX5 PaxDb:Q9WTX5
PRIDE:Q9WTX5 Ensembl:ENSMUST00000037324 Ensembl:ENSMUST00000109072
GeneID:21402 KEGG:mmu:21402 CTD:21402 InParanoid:Q9WTX5
NextBio:300668 Bgee:Q9WTX5 CleanEx:MM_SKP1A Genevestigator:Q9WTX5
GermOnline:ENSMUSG00000036309 Uniprot:Q9WTX5
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>RGD|1359648 [details] [associations]
symbol:Skp1 "S-phase kinase-associated protein 1" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=ISO;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0031519 "PcG protein
complex" evidence=IEA;ISO] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 RGD:1359648 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
GO:GO:0004842 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:BC058152 IPI:IPI00369350
RefSeq:NP_001007609.1 UniGene:Rn.3477 ProteinModelPortal:Q6PEC4
SMR:Q6PEC4 DIP:DIP-29863N IntAct:Q6PEC4 STRING:Q6PEC4
PhosphoSite:Q6PEC4 PRIDE:Q6PEC4 Ensembl:ENSRNOT00000007676
GeneID:287280 KEGG:rno:287280 UCSC:RGD:1359648 InParanoid:Q6PEC4
NextBio:625795 ArrayExpress:Q6PEC4 Genevestigator:Q6PEC4
GermOnline:ENSRNOG00000005828 Uniprot:Q6PEC4
Length = 163
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 85/167 (50%), Positives = 107/167 (64%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>UNIPROTKB|E2RRW0 [details] [associations]
symbol:SKP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518
GO:GO:0031519 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:AAEX03007782 Ensembl:ENSCAFT00000001535 Uniprot:E2RRW0
Length = 163
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 85/167 (50%), Positives = 106/167 (63%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLPSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>DICTYBASE|DDB_G0269230 [details] [associations]
symbol:fpaA "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016567 "protein ubiquitination"
evidence=TAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0269230
GO:GO:0005938 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U18063
EMBL:U73685 PIR:A55969 RefSeq:XP_646453.1 ProteinModelPortal:P52285
SMR:P52285 IntAct:P52285 GlycoSuiteDB:P52285 PRIDE:P52285
EnsemblProtists:DDB0191107 GeneID:8617413 KEGG:ddi:DDB_G0269230
OMA:KNWDADF ProtClustDB:CLSZ2729221 Uniprot:P52285
Length = 162
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 83/161 (51%), Positives = 108/161 (67%)
Query: 6 MIVLKSCDGESFEVEEAVALESTTIKHMIED-DCADNGIPLPNVTGKILAKVVEYCKKHV 64
++ L+S D + FE+E+ +A S TIK+MIED +D+ IPLPNVT IL KV++YC+ H
Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHH 62
Query: 65 EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDL 124
+ P+ Q +D+ +D DF KVDQ TLF+LILAANYL+IK LLD+
Sbjct: 63 QHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDV 114
Query: 125 TCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W
Sbjct: 115 TCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
>DICTYBASE|DDB_G0273615 [details] [associations]
symbol:fpaB-2 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 83/161 (51%), Positives = 107/161 (66%)
Query: 6 MIVLKSCDGESFEVEEAVALESTTIKHMIED-DCADNGIPLPNVTGKILAKVVEYCKKHV 64
++ L+S D + FE+E+ +A S TIK+MIED +D IPLPNVT IL KV++YC+ H
Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHH 62
Query: 65 EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDL 124
+ P+ Q +D+ +D DF KVDQ TLF+LILAANYL+IK LLD+
Sbjct: 63 QHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDV 114
Query: 125 TCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W
Sbjct: 115 TCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
>DICTYBASE|DDB_G0273251 [details] [associations]
symbol:fpaB-1 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 83/161 (51%), Positives = 107/161 (66%)
Query: 6 MIVLKSCDGESFEVEEAVALESTTIKHMIED-DCADNGIPLPNVTGKILAKVVEYCKKHV 64
++ L+S D + FE+E+ +A S TIK+MIED +D IPLPNVT IL KV++YC+ H
Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHH 62
Query: 65 EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDL 124
+ P+ Q +D+ +D DF KVDQ TLF+LILAANYL+IK LLD+
Sbjct: 63 QHPSPQGDDKKDEKRL--------DDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDV 114
Query: 125 TCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W
Sbjct: 115 TCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
>UNIPROTKB|F8W8N3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00985006
ProteinModelPortal:F8W8N3 SMR:F8W8N3 Ensembl:ENST00000328392
ArrayExpress:F8W8N3 Bgee:F8W8N3 Uniprot:F8W8N3
Length = 158
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 81/151 (53%), Positives = 103/151 (68%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 152
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFT 146
>TAIR|locus:2061709 [details] [associations]
symbol:MEO "AT2G20160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006081
IPI:IPI00536504 PIR:G84585 RefSeq:NP_565467.1 UniGene:At.66224
ProteinModelPortal:Q9SL65 SMR:Q9SL65 IntAct:Q9SL65 STRING:Q9SL65
EnsemblPlants:AT2G20160.1 GeneID:816536 KEGG:ath:AT2G20160
TAIR:At2g20160 InParanoid:Q9SL65 OMA:LAIIIEY PhylomeDB:Q9SL65
Genevestigator:Q9SL65 Uniprot:Q9SL65
Length = 150
Score = 203 (76.5 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 41/65 (63%), Positives = 49/65 (75%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYC 60
MSS K IVL S D E FE++EAVA + + HMI+DDCAD I L NVTGKILA ++EYC
Sbjct: 1 MSSKK-IVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYC 59
Query: 61 KKHVE 65
KKHV+
Sbjct: 60 KKHVD 64
Score = 179 (68.1 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 88 EEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFN 146
+ + +WD +FVK +D TLF L+ AA+YL + GL +L Q +AD KT EIR+ FN
Sbjct: 69 KNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFN 128
Query: 147 IKNDFTPXXXXXXXXXNQWAF 167
I+ND+TP N+WAF
Sbjct: 129 IENDYTPEEEEELRKKNEWAF 149
>FB|FBgn0025637 [details] [associations]
symbol:skpA "skpA" species:7227 "Drosophila melanogaster"
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0042023
"DNA endoreduplication" evidence=IMP] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0010824
"regulation of centrosome duplication" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0005813 GO:GO:0005875
GO:GO:0007095 GO:GO:0007067 GO:GO:0051298 GO:GO:0022008
GO:GO:0005819 GO:GO:0045931 EMBL:AE014298 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0031647 GO:GO:0006511
GO:GO:0019005 GO:GO:0030261 eggNOG:COG5201 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0042023 EMBL:AL031581 GO:GO:0010824
OMA:VIQWCTY GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF220066
EMBL:AY069297 EMBL:BT099582 EMBL:BT099610 PIR:T13390
RefSeq:NP_001033818.1 RefSeq:NP_477390.1 RefSeq:NP_726690.1
RefSeq:NP_726691.1 RefSeq:NP_726692.1 RefSeq:NP_726693.1
RefSeq:NP_726694.1 RefSeq:NP_726695.1 UniGene:Dm.7039 SMR:O77430
DIP:DIP-18869N IntAct:O77430 MINT:MINT-318247 STRING:O77430
EnsemblMetazoa:FBtr0070123 EnsemblMetazoa:FBtr0070124
EnsemblMetazoa:FBtr0070125 EnsemblMetazoa:FBtr0070126
EnsemblMetazoa:FBtr0070127 EnsemblMetazoa:FBtr0070128
EnsemblMetazoa:FBtr0070129 EnsemblMetazoa:FBtr0100530 GeneID:31016
KEGG:dme:Dmel_CG16983 UCSC:CG16983-RA CTD:31016 FlyBase:FBgn0025637
InParanoid:O77430 OrthoDB:EOG4BG7CC GenomeRNAi:31016 NextBio:771500
Uniprot:O77430
Length = 162
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 85/168 (50%), Positives = 105/168 (62%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIEDDCA----DNGI-PLPNVTGKILAKVVEYCK 61
I L+S D E F+ + +A S TIK M+ED C +N I PLPNV IL KV+ +
Sbjct: 4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLED-CGMEDDENAIVPLPNVNSTILRKVLTWAH 62
Query: 62 KHVEVPT-TQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKG 120
H + P T+D +D+ SWD DF+KVDQ TLF+LILAANYL+IKG
Sbjct: 63 YHKDDPQPTEDDESKEKRT---------DDIISWDADFLKVDQGTLFELILAANYLDIKG 113
Query: 121 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LL+LTC+TVA+MIKGKTPEEIRKTFNIK DF+P N+W E
Sbjct: 114 LLELTCKTVANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEE 161
>UNIPROTKB|G3MZV0 [details] [associations]
symbol:G3MZV0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:DAAA02025649 PRIDE:G3MZV0 Ensembl:ENSBTAT00000063619
NextBio:20927407 Uniprot:G3MZV0
Length = 160
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 82/167 (49%), Positives = 103/167 (61%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK ++ED + D+ +PLPNV IL K +C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTVLEDLGMDDEGDDDPVPLPNVNAAILKK---WCT 60
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 61 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 112
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKT EEIRKTFNIKNDFT NQW E
Sbjct: 113 LDVTCKTVANMIKGKTREEIRKTFNIKNDFTEEEEAQVRKENQWCEE 159
>UNIPROTKB|E7ERH2 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899
ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336 IPI:IPI00979610
ProteinModelPortal:E7ERH2 SMR:E7ERH2 Ensembl:ENST00000519321
ArrayExpress:E7ERH2 Bgee:E7ERH2 Uniprot:E7ERH2
Length = 142
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 77/147 (52%), Positives = 99/147 (67%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIK 148
LD+TC+TVA+MIKGKTPEEIRKTFNIK
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIK 142
>ASPGD|ASPL0000044827 [details] [associations]
symbol:sconC species:162425 "Emericella nidulans"
[GO:0006790 "sulfur compound metabolic process" evidence=IEP]
[GO:0045116 "protein neddylation" evidence=IEA] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0000921 "septin ring assembly" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0051382 "kinetochore assembly" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0043254 "regulation of protein
complex assembly" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0007096 "regulation of exit
from mitosis" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0043295 "glutathione binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043291 "RAVE
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 EMBL:BN001307 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AACD01000038 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U75874
RefSeq:XP_659906.1 HSSP:P34991 ProteinModelPortal:Q5BAX8 SMR:Q5BAX8
STRING:Q5BAX8 GeneID:2874613 KEGG:ani:AN2302.2 OMA:IMNILEV
OrthoDB:EOG4T1MX2 Uniprot:Q5BAX8
Length = 161
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 78/165 (47%), Positives = 106/165 (64%)
Query: 5 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCAD--NGIPLPNVTGKILAKVVEYCKK 62
KM+V+ S DG++ EV VA S IK+M+ED D IP+PNV+ +L+KV+E+C
Sbjct: 4 KMLVMTSNDGKNIEVPRDVAERSLLIKNMLED-LGDPTEPIPIPNVSENVLSKVLEWCAH 62
Query: 63 HV-EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P++ D D++ WD F++VDQ LF++ILAANYL+IK L
Sbjct: 63 HRNDPPSSADDDDSRRKTT---------DIEEWDQKFMQVDQEMLFEIILAANYLDIKPL 113
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 166
LD+ C+TVA+MIKGK+PEEIRKTFNI+NDFTP N+WA
Sbjct: 114 LDIGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>UNIPROTKB|G4N3J5 [details] [associations]
symbol:MGG_04978 "E3 ubiquitin ligase complex SCF subunit
scon-3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:CM001233 GO:GO:0016874 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
RefSeq:XP_003712477.1 ProteinModelPortal:G4N3J5 SMR:G4N3J5
EnsemblFungi:MGG_04978T0 GeneID:2675549 KEGG:mgr:MGG_04978
Uniprot:G4N3J5
Length = 168
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 77/163 (47%), Positives = 100/163 (61%)
Query: 9 LKSCDGESFEVEEAVALESTTIKHMI----EDDCADNGIPLPNVTGKILAKVVEYCKKHV 64
L+S DG+S EV+ AVA S IK +I E+ A IP+PNV+ +L KV+E+C+ H
Sbjct: 11 LQSNDGQSIEVDRAVACRSRLIKDLIGDLGEEMVASTPIPIPNVSEAVLRKVLEWCEHHR 70
Query: 65 EVPT-TQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLD 123
P T D D+ WD F++VDQ LF++ILA+NYL+IK LLD
Sbjct: 71 NDPVQTSDEDSESRKKTT--------DIDEWDQKFMQVDQEMLFEIILASNYLDIKPLLD 122
Query: 124 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 166
+ C+TVA+MIKGK+PEEIRKTFNI NDFTP N+WA
Sbjct: 123 VGCKTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWA 165
>FB|FBgn0026176 [details] [associations]
symbol:skpB "skpB" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF220067 EMBL:BT023253 RefSeq:NP_610729.1
UniGene:Dm.7613 SMR:Q7KJ69 DIP:DIP-18873N IntAct:Q7KJ69
STRING:Q7KJ69 EnsemblMetazoa:FBtr0088020 GeneID:36298
KEGG:dme:Dmel_CG8881 UCSC:CG8881-RA CTD:36298 FlyBase:FBgn0026176
InParanoid:Q7KJ69 OMA:MPIIRLE OrthoDB:EOG4ZCRMP GenomeRNAi:36298
NextBio:797800 Uniprot:Q7KJ69
Length = 161
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 76/163 (46%), Positives = 101/163 (61%)
Query: 6 MIVLKSCDGESFEVEEAVALESTTIKHMIED--DCADNGI-PLPNVTGKILAKVVEYCKK 62
+I L+S D E F+ ++ +A S TI+ IED D +DN + PLPNV IL KV+ +
Sbjct: 3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATY 62
Query: 63 HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLL 122
H + P + +D+ SWD DF+KVDQ TLF+LILAANYLNI+GLL
Sbjct: 63 HKDDPVVTEEVENKEKRT--------DDISSWDADFLKVDQGTLFELILAANYLNIQGLL 114
Query: 123 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
D+TC+TVA+MIKGK+P+ IR TF I+NDF P N+W
Sbjct: 115 DVTCKTVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
>WB|WBGene00004807 [details] [associations]
symbol:skr-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 79/167 (47%), Positives = 100/167 (59%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMI-----EDDCADNGIPLP--NVTGKILAKVVEY 59
I + S D E F V V S TI ++ +D+ N P+P NVT IL KV+ +
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 60 CKKHVEVP-TTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNI 118
C H P +T+D +D+ SWD +F+KVDQ TLF+LILAANYL+I
Sbjct: 76 CNHHHSDPISTEDSDNREKRT---------DDIGSWDVEFLKVDQGTLFELILAANYLDI 126
Query: 119 KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
KGLLD+TC+TVA+MIKGK+PEEIR+TFNIKNDFTP N W
Sbjct: 127 KGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAW 173
>UNIPROTKB|G5ECU1 [details] [associations]
symbol:skr-1 "Protein SKR-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 79/167 (47%), Positives = 100/167 (59%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMI-----EDDCADNGIPLP--NVTGKILAKVVEY 59
I + S D E F V V S TI ++ +D+ N P+P NVT IL KV+ +
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 60 CKKHVEVP-TTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNI 118
C H P +T+D +D+ SWD +F+KVDQ TLF+LILAANYL+I
Sbjct: 76 CNHHHSDPISTEDSDNREKRT---------DDIGSWDVEFLKVDQGTLFELILAANYLDI 126
Query: 119 KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
KGLLD+TC+TVA+MIKGK+PEEIR+TFNIKNDFTP N W
Sbjct: 127 KGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAW 173
>TAIR|locus:2093064 [details] [associations]
symbol:SK8 "AT3G21830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056601 IPI:IPI00519509 RefSeq:NP_566692.1
UniGene:At.62404 ProteinModelPortal:Q9LSY1 SMR:Q9LSY1 IntAct:Q9LSY1
EnsemblPlants:AT3G21830.1 GeneID:821737 KEGG:ath:AT3G21830
TAIR:At3g21830 InParanoid:Q9LSY1 OMA:HNEALNE Genevestigator:Q9LSY1
Uniprot:Q9LSY1
Length = 152
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 74/166 (44%), Positives = 101/166 (60%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK 62
S K I+LKS +G++FE+EE A + TI HMIE +C DN I + +T +IL V+EYC K
Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNK 61
Query: 63 HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLL 122
H V ++DL+ WD +F++ D++T+F L AAN+LN K LL
Sbjct: 62 H-HVDAANPCS--------------DDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLL 106
Query: 123 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
L QTVADMIKG TP+++R+ FNI+ND TP N+WAFE
Sbjct: 107 HLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
>UNIPROTKB|E5RJR5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00974176
ProteinModelPortal:E5RJR5 SMR:E5RJR5 Ensembl:ENST00000521216
ArrayExpress:E5RJR5 Bgee:E5RJR5 Uniprot:E5RJR5
Length = 163
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 76/167 (45%), Positives = 98/167 (58%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H + P + +D+ WD +F+K + AANYL+IKGL
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKYTLRKTTVSLQAANYLDIKGL 115
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
LD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E
Sbjct: 116 LDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>POMBASE|SPBC409.05 [details] [associations]
symbol:skp1 "SCF ubiquitin ligase complex subunit Skp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000920 "cytokinetic
cell separation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006998 "nuclear envelope organization"
evidence=IMP] [GO:0007035 "vacuolar acidification" evidence=ISO]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0042493
"response to drug" evidence=IGI] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] [GO:0043291 "RAVE complex" evidence=IPI]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IMP] [GO:0070072 "vacuolar proton-transporting
V-type ATPase complex assembly" evidence=TAS] [GO:2000060 "positive
regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 PomBase:SPBC409.05
GO:GO:0005829 GO:GO:0005634 GO:GO:0005773 GO:GO:0007095
GO:GO:0007067 GO:GO:0042493 EMBL:CU329671 GenomeReviews:CU329671_GR
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006998
GO:GO:0030163 GO:GO:0000920 GO:GO:0006511 GO:GO:0019005
GO:GO:0070072 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:2000060 GO:GO:0007035 GO:GO:0045841
EMBL:AB027472 GO:GO:0043291 OMA:VIQWCTY OrthoDB:EOG4T1MX2
EMBL:AB067633 EMBL:AF071066 PIR:T45459 RefSeq:NP_595455.1
ProteinModelPortal:Q9Y709 SMR:Q9Y709 IntAct:Q9Y709 STRING:Q9Y709
EnsemblFungi:SPBC409.05.1 GeneID:2540917 KEGG:spo:SPBC409.05
NextBio:20802032 Uniprot:Q9Y709
Length = 161
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 73/167 (43%), Positives = 99/167 (59%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADN-GIPLPNVTGKILAKVVEY 59
MS K+I S D E F V++ +A S IK+M+ED N IPLPNV+ +L KV+E+
Sbjct: 1 MSKIKLI---SSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEW 57
Query: 60 CKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIK 119
C+ H ++ D+ WD F+ VDQ LF+++LA+NYL+IK
Sbjct: 58 CEHH------KNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIK 111
Query: 120 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 166
LLD C+TVA+MI+GK+PE+IRKTFNI NDFTP N+WA
Sbjct: 112 PLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
>CGD|CAL0001786 [details] [associations]
symbol:SKP1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0043291 "RAVE complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031518 "CBF3 complex"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0045116 "protein neddylation" evidence=IEA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007035 "vacuolar acidification"
evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0045841 "negative regulation of mitotic
metaphase/anaphase transition" evidence=IEA] [GO:0000921 "septin
ring assembly" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0051382 "kinetochore assembly"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0043254 "regulation of protein complex assembly" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0007096 "regulation of exit from mitosis" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IEA]
[GO:0019237 "centromeric DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 CGD:CAL0001786
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
EMBL:AACQ01000115 EMBL:AACQ01000111 RefSeq:XP_713872.1
RefSeq:XP_714072.1 ProteinModelPortal:Q59WE2 SMR:Q59WE2
STRING:Q59WE2 GeneID:3644272 GeneID:3644485 KEGG:cal:CaO19.11905
KEGG:cal:CaO19.4427 Uniprot:Q59WE2
Length = 164
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 74/171 (43%), Positives = 99/171 (57%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADN-----GIPLPNVTGKILAK 55
MSSPK+I++ S D E F VE +A +S IK+MI D D IP PNV +L K
Sbjct: 1 MSSPKVIIVSS-DNEKFPVEPKIAEKSILIKNMINDLHPDGLEEDFEIPTPNVRANVLCK 59
Query: 56 VVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANY 115
V+E+C+ H D ++ WD +F+KVDQ L+++ILAANY
Sbjct: 60 VLEWCEHHKNTVFQDDEDEDAKKSV---------PVEEWDRNFLKVDQEMLYEIILAANY 110
Query: 116 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 166
LNIK LL+ C+ VA+MIK K+PEE+R+TFNI NDF+P N+WA
Sbjct: 111 LNIKPLLESGCKMVAEMIKSKSPEELRRTFNIINDFSPEEEAAIRKENEWA 161
>SGD|S000002736 [details] [associations]
symbol:SKP1 "Evolutionarily conserved kinetochore protein"
species:4932 "Saccharomyces cerevisiae" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000921 "septin ring assembly" evidence=IMP] [GO:0000776
"kinetochore" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
[GO:0045116 "protein neddylation" evidence=IGI;IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IGI;IDA;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0043291 "RAVE complex" evidence=IPI] [GO:0051382 "kinetochore
assembly" evidence=IMP;IDA] [GO:0043254 "regulation of protein
complex assembly" evidence=IPI] [GO:0007035 "vacuolar
acidification" evidence=IGI;IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007096 "regulation of
exit from mitosis" evidence=IMP;IPI] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 SGD:S000002736 GO:GO:0005634 GO:GO:0005773
GO:GO:0000086 GO:GO:0000776 GO:GO:0000082 EMBL:BK006938
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0003688
GO:GO:0000910 GO:GO:0019005 GO:GO:0007096 GO:GO:0000921
GO:GO:0042787 GO:GO:0051382 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:U32517 GO:GO:0000777 GO:GO:0007035
GO:GO:0031518 GO:GO:0031146 PDB:1NEX PDB:3MKS PDB:3V7D PDBsum:1NEX
PDBsum:3MKS PDBsum:3V7D GO:GO:0045116 GO:GO:0043254
RefSeq:NP_010619.3 GeneID:851932 KEGG:sce:YDR332W
RefSeq:NP_010615.3 GeneID:851928 KEGG:sce:YDR328C GO:GO:0043291
GeneTree:ENSGT00390000012652 OrthoDB:EOG4T1MX2 EMBL:U43179
EMBL:U61764 EMBL:AY557730 PIR:S59793 ProteinModelPortal:P52286
SMR:P52286 DIP:DIP-1236N IntAct:P52286 MINT:MINT-384072
STRING:P52286 PaxDb:P52286 PeptideAtlas:P52286 PRIDE:P52286
EnsemblFungi:YDR328C OMA:PVEIANG EvolutionaryTrace:P52286
NextBio:969983 Genevestigator:P52286 GermOnline:YDR328C
Uniprot:P52286
Length = 194
Score = 275 (101.9 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 60/136 (44%), Positives = 81/136 (59%)
Query: 35 EDDCADNGI--PLPNVTGKILAKVVEYCKKHVE--VPTTQDXXXXXXXXXXXXXXXXEED 90
+DD D+ I P+PNV +L KV+E+ + H + P D
Sbjct: 67 DDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSA-----------P 115
Query: 91 LKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
+ SWD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI ND
Sbjct: 116 VDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVND 175
Query: 151 FTPXXXXXXXXXNQWA 166
FTP N+WA
Sbjct: 176 FTPEEEAAIRRENEWA 191
Score = 54 (24.1 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED 36
+VL S +GE F V++ +A S +K+ + D
Sbjct: 6 VVLVSGEGERFTVDKKIAERSLLLKNYLND 35
>WB|WBGene00004808 [details] [associations]
symbol:skr-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0000239 "pachytene" evidence=IMP] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0000132 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0008285 GO:GO:0008406 GO:GO:0002119 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 GO:GO:0019005 GO:GO:0045132 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:IRRAFNI GO:GO:0000239
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084 EMBL:AF440506
PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193 SMR:G5EDD8
IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 71/167 (42%), Positives = 94/167 (56%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMI-----EDDCADNGIPLP--NVTGKILAKVVEY 59
I + S D E F V V S T+ ++ +DD N P+P NVT IL KV+ +
Sbjct: 16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINW 75
Query: 60 CKKHVEVPT-TQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNI 118
C KH P T+D + ++ WD F+ +DQ TLF+LILAANYL+I
Sbjct: 76 CTKHQSDPIPTEDSEKKT-----------DGSIQDWDKKFLDIDQGTLFELILAANYLDI 124
Query: 119 KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
KGLLD+ CQ+VA+MIKGK+P+EIR+ FNIK+DFT N W
Sbjct: 125 KGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAW 171
>UNIPROTKB|G5EDD8 [details] [associations]
symbol:skr-2 "SKR-2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0008340 GO:GO:0009792 GO:GO:0000132
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0008285
GO:GO:0008406 GO:GO:0002119 GO:GO:0040011 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511
GO:GO:0019005 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:IRRAFNI
GO:GO:0000239 GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084
EMBL:AF440506 PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193
SMR:G5EDD8 IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 71/167 (42%), Positives = 94/167 (56%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMI-----EDDCADNGIPLP--NVTGKILAKVVEY 59
I + S D E F V V S T+ ++ +DD N P+P NVT IL KV+ +
Sbjct: 16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINW 75
Query: 60 CKKHVEVPT-TQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNI 118
C KH P T+D + ++ WD F+ +DQ TLF+LILAANYL+I
Sbjct: 76 CTKHQSDPIPTEDSEKKT-----------DGSIQDWDKKFLDIDQGTLFELILAANYLDI 124
Query: 119 KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
KGLLD+ CQ+VA+MIKGK+P+EIR+ FNIK+DFT N W
Sbjct: 125 KGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAW 171
>FB|FBgn0034863 [details] [associations]
symbol:skpF "skpF" species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 eggNOG:COG5201
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:AY118610 RefSeq:NP_611796.1 UniGene:Dm.18854 SMR:Q9W1Q0
IntAct:Q9W1Q0 MINT:MINT-783087 STRING:Q9W1Q0
EnsemblMetazoa:FBtr0072022 GeneID:37713 KEGG:dme:Dmel_CG12227
UCSC:CG12227-RA CTD:37713 FlyBase:FBgn0034863 InParanoid:Q9W1Q0
OMA:PVEAEND OrthoDB:EOG45QFWH GenomeRNAi:37713 NextBio:805037
Uniprot:Q9W1Q0
Length = 171
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 70/153 (45%), Positives = 93/153 (60%)
Query: 6 MIVLKSCDGESFEVEEAVALESTTIKHMIEDDC---ADNG--IPLPNVTGKILAKVVEYC 60
+I L+S DGE FE + A S+TIK ++ED C A+N IPLPNV IL KV+ +
Sbjct: 3 VIKLQSSDGEIFETDIETAKCSSTIKTLLED-CPVEAENDTLIPLPNVNSTILKKVLIWA 61
Query: 61 KKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKG 120
K H E ++ + WD +F+ +DQ TLF+LILAANYL+I
Sbjct: 62 KHHREDIAEENEEEAAKSVAV--------QITPWDAEFLSMDQGTLFELILAANYLDIPN 113
Query: 121 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 153
LL+ C TVA+MIKG+T EEIR+TF+I NDF+P
Sbjct: 114 LLNAACMTVANMIKGRTTEEIRQTFHITNDFSP 146
>WB|WBGene00004809 [details] [associations]
symbol:skr-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0006952
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:ENDFTHE EMBL:Z83109
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440507 PIR:T22198
RefSeq:NP_507059.1 UniGene:Cel.192 ProteinModelPortal:G5EE67
SMR:G5EE67 EnsemblMetazoa:F44G3.6.1 EnsemblMetazoa:F44G3.6.2
GeneID:180081 KEGG:cel:CELE_F44G3.6 CTD:180081 WormBase:F44G3.6
NextBio:908014 Uniprot:G5EE67
Length = 167
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 68/171 (39%), Positives = 95/171 (55%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIED-------DCADNGIPLPNVTGKILAK 55
S K I L S D ++F V V +S TI +I++ +++ IPL VT IL K
Sbjct: 6 SQKQIKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEK 65
Query: 56 VVEYCKKHVE-VPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAAN 114
++ +C+ H + P D D+ WD +F+KVDQ TLF++ILAAN
Sbjct: 66 IITWCEHHADDEPKKVDENKKTV------------DISEWDAEFMKVDQGTLFEIILAAN 113
Query: 115 YLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
YL+I+GLLD+T Q VA+M+KGKTP +IR FNI+NDF+ N W
Sbjct: 114 YLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAW 164
>FB|FBgn0026175 [details] [associations]
symbol:skpC "skpC" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE014298 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 OrthoDB:EOG4K6DMM
EMBL:AF220068 EMBL:BT120007 RefSeq:NP_608358.1 UniGene:Dm.26675
SMR:Q9VWC4 IntAct:Q9VWC4 MINT:MINT-763311 STRING:Q9VWC4
EnsemblMetazoa:FBtr0074797 GeneID:32996 KEGG:dme:Dmel_CG11941
UCSC:CG11941-RA CTD:32996 FlyBase:FBgn0026175 InParanoid:Q9VWC4
OMA:HMIEESS GenomeRNAi:32996 NextBio:781428 Uniprot:Q9VWC4
Length = 158
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 67/154 (43%), Positives = 89/154 (57%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNG----IPLPNVTGKILAKV 56
M +P I L+S DG F E A S TIK M+E +N +PLP V IL+K+
Sbjct: 1 MDAPT-IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKI 59
Query: 57 VEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYL 116
+ + H + D D+ +WD +F+ VDQ TLF++ILAANYL
Sbjct: 60 LTWIYHHKD----DDAHGAEGVELSPQS---PHDISAWDANFINVDQPTLFEIILAANYL 112
Query: 117 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
IKGL+DL C+TVA+MI+GKTPEEIR TFNI ++
Sbjct: 113 EIKGLVDLCCKTVANMIRGKTPEEIRHTFNIPDE 146
>TAIR|locus:2093074 [details] [associations]
symbol:SK7 "AT3G21840" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:BX841469 IPI:IPI00538513
RefSeq:NP_566693.1 UniGene:At.70383 ProteinModelPortal:Q9LSY0
SMR:Q9LSY0 IntAct:Q9LSY0 STRING:Q9LSY0 EnsemblPlants:AT3G21840.1
GeneID:821738 KEGG:ath:AT3G21840 TAIR:At3g21840 InParanoid:Q9LSY0
OMA:LMIIACK Genevestigator:Q9LSY0 Uniprot:Q9LSY0
Length = 125
Score = 265 (98.3 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 62/131 (47%), Positives = 78/131 (59%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK 62
S K I+LKS DG+ FE+EE A + TI HMIE +C DN IP+ NVT +IL V+EYC K
Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNK 61
Query: 63 HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLL 122
H V +EDLK WD +F++ DQ T+F L+ AA L+IK LL
Sbjct: 62 H-HVDAANPCS--------------DEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLL 106
Query: 123 DLTCQTVADMI 133
L QTVADM+
Sbjct: 107 ALAYQTVADMV 117
Score = 33 (16.7 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 163 NQWAFE 168
N+WAFE
Sbjct: 120 NKWAFE 125
>TAIR|locus:2085201 [details] [associations]
symbol:SK6 "AT3G53060" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=TAS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 PANTHER:PTHR11165
SUPFAM:SSF81382 EMBL:AL132969 EMBL:DQ446762 EMBL:DQ653150
IPI:IPI00533585 PIR:T47563 RefSeq:NP_566978.1 UniGene:At.53910
ProteinModelPortal:Q1PEF6 SMR:Q1PEF6 STRING:Q1PEF6
EnsemblPlants:AT3G53060.1 GeneID:824472 KEGG:ath:AT3G53060
TAIR:At3g53060 InParanoid:Q1PEF6 Genevestigator:Q1PEF6
Uniprot:Q1PEF6
Length = 85
Score = 157 (60.3 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 30/42 (71%), Positives = 32/42 (76%)
Query: 30 IKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPTTQD 71
IK M EDDCADNGIPLPNVT KIL V+EYCKKHV +D
Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVVESKEED 44
Score = 134 (52.2 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 25/39 (64%), Positives = 34/39 (87%)
Query: 88 EEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLT 125
EEDLK WD +F+K ++Q+ LFD+++AANYLNI+ LLDLT
Sbjct: 42 EEDLKKWDAEFMKKMEQSILFDVMMAANYLNIQSLLDLT 80
>WB|WBGene00004810 [details] [associations]
symbol:skr-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:EWDADFM
EMBL:AL117207 GeneTree:ENSGT00390000012652 HSSP:P34991
RefSeq:NP_507857.1 ProteinModelPortal:Q9U1Y9 SMR:Q9U1Y9
STRING:Q9U1Y9 PaxDb:Q9U1Y9 EnsemblMetazoa:Y60A3A.18 GeneID:191762
KEGG:cel:CELE_Y60A3A.18 UCSC:Y60A3A.18 CTD:191762
WormBase:Y60A3A.18 InParanoid:Q9U1Y9 NextBio:950246 Uniprot:Q9U1Y9
Length = 159
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 64/163 (39%), Positives = 87/163 (53%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK 62
S K I L S D ++F V V +S TI +D IPLP VT IL K++ +C+
Sbjct: 6 SQKQIKLISSDDKTFTVSRKVISQSKTISGFTSEDT----IPLPKVTSAILEKIITWCEH 61
Query: 63 HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLL 122
H + D E + WD +F+KVDQ TLF++ILAANYL+I+GLL
Sbjct: 62 HAD-----DEPKKVEKIEKGNKKTVE--ISEWDAEFMKVDQGTLFEIILAANYLDIRGLL 114
Query: 123 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 165
++T Q VA+M+KGKTP ++R F I N F+ N W
Sbjct: 115 EVTTQNVANMMKGKTPSQVRTLFKIDN-FSEEELEAMKKGNAW 156
>FB|FBgn0026174 [details] [associations]
symbol:skpD "skpD" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 HSSP:P34991 EMBL:AY070797 ProteinModelPortal:Q8T976
STRING:Q8T976 FlyBase:FBgn0026174 InParanoid:Q8T976
OrthoDB:EOG4K6DMM Bgee:Q8T976 Uniprot:Q8T976
Length = 182
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 64/154 (41%), Positives = 86/154 (55%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNG----IPLPNVTGKILAKV 56
M +P I L+S DG F E A S TIK M+E +N +PLP V IL K+
Sbjct: 25 MDAPT-IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILDKI 83
Query: 57 VEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYL 116
+ + H + D D+ WD +F+ VDQ LF++ +AANYL
Sbjct: 84 LTWAYHHKD----DDDQAAEGEELTPQS---PHDISPWDANFINVDQPILFEITVAANYL 136
Query: 117 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
IKGL DL C+T+A+MI+GKTPEEIR+TFNI++D
Sbjct: 137 EIKGLEDLCCKTLANMIRGKTPEEIRQTFNIEDD 170
>WB|WBGene00004811 [details] [associations]
symbol:skr-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:Z92786 PIR:T22373 RefSeq:NP_507393.1
ProteinModelPortal:Q9XU27 SMR:Q9XU27 STRING:Q9XU27
EnsemblMetazoa:F47H4.10 GeneID:180148 KEGG:cel:CELE_F47H4.10
UCSC:F47H4.10 CTD:180148 WormBase:F47H4.10 InParanoid:Q9XU27
NextBio:908236 ArrayExpress:Q9XU27 Uniprot:Q9XU27
Length = 145
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 59/152 (38%), Positives = 90/152 (59%)
Query: 1 MSSPKMIV-LKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEY 59
MSS + V + + D F V +A +S + + + + IPL NVT +I KV+E+
Sbjct: 1 MSSEEQDVKIVTSDDVEFIVSPKIANQSKLLADFVVLNQREP-IPLKNVTSEIFKKVIEW 59
Query: 60 CKKHVE-VPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNI 118
C+ H E +P D +D+ WD +F+KVD+ TLF+L+LAA YL+I
Sbjct: 60 CEYHAEDIPKPPDNVEEKRT----------DDIGEWDVEFLKVDKGTLFELVLAATYLDI 109
Query: 119 KGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
KGL ++TC+++A+ IKGK+PEEIR FN+ N+
Sbjct: 110 KGLFNVTCKSIANSIKGKSPEEIRAVFNLGNE 141
>TAIR|locus:2080542 [details] [associations]
symbol:SK5 "AT3G60020" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056631 IPI:IPI00544108 PIR:T47826
RefSeq:NP_567091.1 UniGene:At.62418 ProteinModelPortal:Q9M1X4
SMR:Q9M1X4 IntAct:Q9M1X4 STRING:Q9M1X4 PRIDE:Q9M1X4
EnsemblPlants:AT3G60020.1 GeneID:825172 KEGG:ath:AT3G60020
TAIR:At3g60020 InParanoid:Q9M1X4 OMA:EWDADFM
ProtClustDB:CLSN2917466 Genevestigator:Q9M1X4 Uniprot:Q9M1X4
Length = 153
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 64/162 (39%), Positives = 88/162 (54%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEV 66
I+LKS DG+SFE++E VA +S I HM+ED CA + IPL NVT KIL V++YC+KHV+
Sbjct: 5 IMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKS 64
Query: 67 PTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTC 126
+D D+ +++ + +L DL K + DL
Sbjct: 65 KEEEDLKEWDADFMKTIETTILFDVMM-AANYLNIQ--SLLDL-------TCKTVSDLL- 113
Query: 127 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 168
Q AD++ GKTP+EIR FNI+ND T NQWAF+
Sbjct: 114 Q--ADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
>WB|WBGene00004816 [details] [associations]
symbol:skr-10 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0002164 "larval development" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0040032
"post-embryonic body morphogenesis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0008283 GO:GO:0000003 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0040032 EMBL:AL110479
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440512 PIR:T26386
RefSeq:NP_502902.1 UniGene:Cel.187 ProteinModelPortal:G5EG39
SMR:G5EG39 IntAct:G5EG39 EnsemblMetazoa:Y105C5B.13 GeneID:178447
KEGG:cel:CELE_Y105C5B.13 CTD:178447 WormBase:Y105C5B.13 OMA:PARGLTI
NextBio:901170 Uniprot:G5EG39
Length = 192
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 56/157 (35%), Positives = 87/157 (55%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMI-----EDDCADNGIPLPNVTGKILAK 55
+++P M ++S DG FE+ + +S T+ ++I ED + + IP+ NVTG IL
Sbjct: 15 VAAPIMYKVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKM 74
Query: 56 VVEYCKKHV--EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAA 113
V+E+C+KH +P D + WDT+F+K+D LFDLI+A
Sbjct: 75 VIEWCEKHKGEALPVDDDSVPKHIT------------VPEWDTNFLKIDNEVLFDLIVAC 122
Query: 114 NYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
NYL++ GL++ C+ VA M GK+P+E+R F I D
Sbjct: 123 NYLDVPGLMNYGCKMVAMMAIGKSPDELRIIFAIPTD 159
>WB|WBGene00004814 [details] [associations]
symbol:skr-8 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440510 RefSeq:NP_503044.1 UniGene:Cel.189
ProteinModelPortal:G5ECY4 SMR:G5ECY4 EnsemblMetazoa:C52D10.9
GeneID:178495 KEGG:cel:CELE_C52D10.9 CTD:178495 WormBase:C52D10.9
OMA:NINVPEW NextBio:901360 Uniprot:G5ECY4
Length = 194
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 55/154 (35%), Positives = 87/154 (56%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMI-----EDDCADNGIPLPNVTGKILAKVV 57
+P M ++S DG+ FE+ + +S + ++I ED + + IP+ NVTG IL V+
Sbjct: 19 APIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVI 78
Query: 58 EYCKKHV-EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYL 116
E+C+KH E +D ++ WDT+F+K+D LFDLI+A NYL
Sbjct: 79 EWCEKHKGEALPVEDDSVPKNI-----------NVPEWDTNFLKIDNEVLFDLIVACNYL 127
Query: 117 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
++ GL++ C+ VA+M GK+P+E+R F I D
Sbjct: 128 DVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTD 161
>WB|WBGene00004813 [details] [associations]
symbol:skr-7 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:FO081134
EMBL:AF440509 RefSeq:NP_504221.1 UniGene:Cel.190
ProteinModelPortal:G5EDY3 SMR:G5EDY3 IntAct:G5EDY3
EnsemblMetazoa:Y47D7A.1 GeneID:178840 KEGG:cel:CELE_Y47D7A.1
CTD:178840 WormBase:Y47D7A.1 OMA:QANEAPI NextBio:902772
Uniprot:G5EDY3
Length = 194
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 53/154 (34%), Positives = 87/154 (56%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIE----DDCAD-NGIPLPNVTGKILAKVV 57
+P M ++S DG+ +E+ + +S T+ ++I +D A + IP+ NVTG I+ V+
Sbjct: 19 APIMYKVESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVI 78
Query: 58 EYCKKHV-EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYL 116
E+C+KH E +D + WDT+F+K+D LFDLI+A+N+L
Sbjct: 79 EWCEKHKGETLPVEDDSVPKNIT-----------VPEWDTNFLKIDNDVLFDLIVASNFL 127
Query: 117 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
++ GL+ C+ VA+M GK+P+E+R F I D
Sbjct: 128 DVPGLMSYACKMVANMAIGKSPDEMRVLFAIPTD 161
>WB|WBGene00004812 [details] [associations]
symbol:skr-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 PANTHER:PTHR11165 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 EMBL:AL023837 RefSeq:NP_507574.2
UniGene:Cel.36626 ProteinModelPortal:Q9U2N1 SMR:Q9U2N1
STRING:Q9U2N1 EnsemblMetazoa:Y37H2C.2 GeneID:191763
KEGG:cel:CELE_Y37H2C.2 UCSC:Y37H2C.2 CTD:191763 WormBase:Y37H2C.2
InParanoid:Q9U2N1 OMA:DHIMAAN NextBio:950250 Uniprot:Q9U2N1
Length = 106
Score = 185 (70.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/60 (53%), Positives = 46/60 (76%)
Query: 90 DLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKN 149
++ WD++F+K+DQ TLFDL+LAANYLNI+ L D+T Q +A+M+K TP +IR F + N
Sbjct: 34 EIGEWDSEFLKLDQNTLFDLVLAANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSN 93
Score = 61 (26.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 41 NGIPLPNVTGKILAKVVEYCKKHVEVP 67
+ IPL V KI K++EYC+ H P
Sbjct: 2 DAIPLTKVDAKIFEKIIEYCE-HQGTP 27
Score = 35 (17.4 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 21 EAVALESTTIK--HMIEDDCADNGIPLPNVTGKI 52
+A+ L K I + C G P P + G+I
Sbjct: 2 DAIPLTKVDAKIFEKIIEYCEHQGTPRPLLNGEI 35
>WB|WBGene00004815 [details] [associations]
symbol:skr-9 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440511 RefSeq:NP_503043.1 UniGene:Cel.188
ProteinModelPortal:G5EFA9 SMR:G5EFA9 IntAct:G5EFA9
EnsemblMetazoa:C52D10.7 GeneID:178494 KEGG:cel:CELE_C52D10.7
CTD:178494 WormBase:C52D10.7 OMA:KIVAMMA NextBio:901356
Uniprot:G5EFA9
Length = 194
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 54/154 (35%), Positives = 85/154 (55%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMI-----EDDCADNGIPLPNVTGKILAKVV 57
+P M ++S DG+ FE+ + +S + ++I ED + + IP+ NV G IL V+
Sbjct: 19 APIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVI 78
Query: 58 EYCKKHV-EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYL 116
E+C+KH E +D ++ WDT+F+K+D LFDLI+A NYL
Sbjct: 79 EWCEKHKGEALPVEDDSVPKHV-----------NVPEWDTNFLKIDNDVLFDLIVACNYL 127
Query: 117 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
++ GL++ C+ VA M GK+P+E+R F I D
Sbjct: 128 DVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTD 161
>WB|WBGene00004818 [details] [associations]
symbol:skr-12 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737 EMBL:U60980
EMBL:AF440513 RefSeq:NP_503045.1 UniGene:Cel.20512
ProteinModelPortal:G5EGD5 SMR:G5EGD5 EnsemblMetazoa:C52D10.6.1
EnsemblMetazoa:C52D10.6.2 GeneID:178496 KEGG:cel:CELE_C52D10.6
CTD:178496 WormBase:C52D10.6 OMA:FDEHANN NextBio:901364
Uniprot:G5EGD5
Length = 172
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 56/153 (36%), Positives = 82/153 (53%)
Query: 7 IVLK--SCDGESFEVEEAVALESTTIKHMIED--DCADN-----GIPLPNVTGKILAKVV 57
IV K S DG ++ E +S T+ ++IE+ +N IP+ NV GK +AKV
Sbjct: 13 IVYKIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVA 72
Query: 58 EYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLN 117
E+C+KH +D + WD F+K++ LFDLILA+N+L+
Sbjct: 73 EWCEKHKADAIPEDNMNVLKTLT----------IPEWDQKFLKIEDEALFDLILASNFLD 122
Query: 118 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
IKGL+ C+TV++M KGKT E+R+ F I D
Sbjct: 123 IKGLMYFGCKTVSNMAKGKTTAELREIFGINTD 155
>WB|WBGene00004819 [details] [associations]
symbol:skr-13 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440514 RefSeq:NP_503042.1 UniGene:Cel.18172
ProteinModelPortal:G5EEX4 SMR:G5EEX4 EnsemblMetazoa:C52D10.8
GeneID:178493 KEGG:cel:CELE_C52D10.8 CTD:178493 WormBase:C52D10.8
OMA:KEEDTHA NextBio:901352 Uniprot:G5EEX4
Length = 172
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 56/153 (36%), Positives = 81/153 (52%)
Query: 7 IVLK--SCDGESFEVEEAVALESTTIKHMIED--DCADN-----GIPLPNVTGKILAKVV 57
IV K S DG ++ E +S T+ ++IE+ +N IP+ NV GK +AKV
Sbjct: 13 IVYKIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVA 72
Query: 58 EYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLN 117
E C+KH +D + WD F+K++ LFDLILA+N+L+
Sbjct: 73 ELCEKHKADAIPEDNMNVLKTLT----------IPEWDQKFLKIEDEALFDLILASNFLD 122
Query: 118 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
IKGL+ C+TV++M KGKT E+R+ F I D
Sbjct: 123 IKGLMYYGCKTVSNMAKGKTTAELREIFGINTD 155
>FB|FBgn0031074 [details] [associations]
symbol:skpE "skpE" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0022008 EMBL:AE014298
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
OrthoDB:EOG4K6DMM EMBL:AY752578 EMBL:AY752581 RefSeq:NP_608359.1
UniGene:Dm.17269 SMR:Q9VWC3 IntAct:Q9VWC3 STRING:Q9VWC3
EnsemblMetazoa:FBtr0074806 GeneID:32997 KEGG:dme:Dmel_CG11942
UCSC:CG11942-RA CTD:32997 FlyBase:FBgn0031074 InParanoid:Q9VWC3
OMA:QNDENAI GenomeRNAi:32997 NextBio:781433 Uniprot:Q9VWC3
Length = 167
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 58/157 (36%), Positives = 80/157 (50%)
Query: 1 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNG----IPLPNVTGKILAKV 56
M +P I L+S +G F E VA+ S TIK M++ N +PL +V+ L K+
Sbjct: 1 MVTPT-IKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKI 59
Query: 57 VEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYL 116
+ + H + D + WD F+ V+ TL ++ILAA L
Sbjct: 60 LAWANHHKD----DDDQSTEGEELKPRRPYA---ISPWDAIFLMVNSTTLLEIILAAKQL 112
Query: 117 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 153
IKGLL+LT VA+MI+GKTPEEIR FNI D +P
Sbjct: 113 QIKGLLELTYNVVANMIRGKTPEEIRFIFNIPEDVSP 149
>WB|WBGene00004820 [details] [associations]
symbol:skr-14 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:FO081134 RefSeq:NP_504220.3
ProteinModelPortal:Q9N3U9 SMR:Q9N3U9 STRING:Q9N3U9
EnsemblMetazoa:Y47D7A.8 GeneID:178839 KEGG:cel:CELE_Y47D7A.8
UCSC:Y47D7A.8 CTD:178839 WormBase:Y47D7A.8 InParanoid:Q9N3U9
OMA:RRERCKC NextBio:902768 ArrayExpress:Q9N3U9 Uniprot:Q9N3U9
Length = 197
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 52/147 (35%), Positives = 78/147 (53%)
Query: 11 SCDGESFEVEEAVALESTTIKHMIED--DCADN-----GIPLPNVTGKILAKVVEYCKKH 63
S DG ++ E +S T+ ++IE+ +N IP+ NV GK + KV E+C+KH
Sbjct: 48 SNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKVAEWCEKH 107
Query: 64 VEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLD 123
+D + WD F+K++ LFDLILA+N+L+IKGL+
Sbjct: 108 NADAIPEDNMNVLKTLT----------IPEWDQKFLKIEDEALFDLILASNFLDIKGLMY 157
Query: 124 LTCQTVADMIKGKTPEEIRKTFNIKND 150
C+TV++M KGKT E+R+ F I D
Sbjct: 158 YGCKTVSNMAKGKTTAELREIFGINTD 184
>WB|WBGene00004822 [details] [associations]
symbol:skr-16 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
EMBL:FO080771 PIR:T34158 RefSeq:NP_501128.2
ProteinModelPortal:Q18567 SMR:Q18567 STRING:Q18567 PaxDb:Q18567
EnsemblMetazoa:C42D4.6 GeneID:191765 KEGG:cel:CELE_C42D4.6
UCSC:C42D4.6 CTD:191765 WormBase:C42D4.6 HOGENOM:HOG000018058
InParanoid:Q18567 OMA:NMAKGKN NextBio:950258 Uniprot:Q18567
Length = 181
Score = 129 (50.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 91 LKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKN 149
L WD ++K +D L DLI A+N L ++ L+D C+TVA+M KGK P ++R+ F I
Sbjct: 105 LPQWDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKTVANMAKGKNPAQLRELFGILT 164
Query: 150 D 150
D
Sbjct: 165 D 165
Score = 67 (28.6 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 6 MIVLKSCDGESFEVEEAVALESTTIKHMIED-DCADNGIPLPNVTGKILAKVVEYCKKH 63
+ +L S DGE F+ + S + + + D I + V G L +V+E+C H
Sbjct: 31 IFILISSDGEKFQTDGHCIRHSKVLMQASKSLETPDTPIQVEKVQGDTLNRVLEWCNNH 89
>WB|WBGene00004823 [details] [associations]
symbol:skr-17 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0040018 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:FO080131 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF440517 PIR:T15426 RefSeq:NP_495638.1
UniGene:Cel.18244 ProteinModelPortal:G5EGN7 SMR:G5EGN7
EnsemblMetazoa:C06A8.4 GeneID:174257 KEGG:cel:CELE_C06A8.4
CTD:174257 WormBase:C06A8.4 OMA:CKTVANS NextBio:883257
Uniprot:G5EGN7
Length = 180
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 51/152 (33%), Positives = 79/152 (51%)
Query: 4 PKMIVLKSCDGESFEVE-EAVALEST---TIKHMIEDD--CAD-NGIPLPNVTGKILAKV 56
P+++ L S DG + + A+ L ST TI+ + D CA+ +P+ NV G L +
Sbjct: 22 PRLLQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLL 81
Query: 57 VEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFV-KVDQATLFDLILAANY 115
+E+C KH E D + SWD F+ ++ + LFDLI AA +
Sbjct: 82 IEWCDKHKE----DDPAIALAEKDKKNIC-----IPSWDRHFLSRLPMSNLFDLITAAYH 132
Query: 116 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNI 147
L++ GL++ C+TVA+ KGK EE+R+ F I
Sbjct: 133 LDVTGLINYGCKTVANSAKGKNAEEMRELFGI 164
>UNIPROTKB|E5RGM3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 SMART:SM00512 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 PANTHER:PTHR11165 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00978800
ProteinModelPortal:E5RGM3 SMR:E5RGM3 Ensembl:ENST00000520417
ArrayExpress:E5RGM3 Bgee:E5RGM3 Uniprot:E5RGM3
Length = 102
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 41/107 (38%), Positives = 59/107 (55%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAKVVEYCK 61
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL KV+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFD 108
H + P + +D+ WD +F+KVDQ TLF+
Sbjct: 64 HHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFE 102
>WB|WBGene00004821 [details] [associations]
symbol:skr-15 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0040010 GO:GO:0006974 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440516
EMBL:FO080579 PIR:T33615 RefSeq:NP_494662.1 UniGene:Cel.185
ProteinModelPortal:G5EE88 SMR:G5EE88 EnsemblMetazoa:F54D10.1
GeneID:173729 KEGG:cel:CELE_F54D10.1 CTD:173729 WormBase:F54D10.1
OMA:YSIESND NextBio:880833 Uniprot:G5EE88
Length = 184
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 43/149 (28%), Positives = 70/149 (46%)
Query: 9 LKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLP--NVTGKILAKVVEYCK 61
++S D ++ E +S T+ + I + + A++ +P+P V GK L VVE+C+
Sbjct: 23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCE 82
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H P + L WD FV ++ L DL+ A+N+L + L
Sbjct: 83 HHKADPVPEAYPSGNTV------------LPVWDRKFVDIEHDALTDLVNASNFLEVMTL 130
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKND 150
L C+ +A + KG +PEE+R F I D
Sbjct: 131 LTYCCKFIAGLAKGMSPEEMRVFFCIPTD 159
>TAIR|locus:505006407 [details] [associations]
symbol:SK21 "AT3G61415" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 HOGENOM:HOG000034103
ProtClustDB:CLSN2689298 EMBL:AY084971 IPI:IPI00527962
IPI:IPI00892309 RefSeq:NP_001118876.1 RefSeq:NP_567113.1
UniGene:At.34286 ProteinModelPortal:Q8LF97 SMR:Q8LF97
EnsemblPlants:AT3G61415.1 GeneID:825314 KEGG:ath:AT3G61415
TAIR:At3g61415 InParanoid:Q8LF97 OMA:MEDDIFT PhylomeDB:Q8LF97
Genevestigator:Q8LF97 Uniprot:Q8LF97
Length = 351
Score = 153 (58.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/151 (31%), Positives = 81/151 (53%)
Query: 7 IVLKSCDGESFEVEEAVALESTTI-KHMIEDDCADN---GIPLPN-VTGKILAKVVEYCK 61
I L++ DG +VE+ VA+ I + +I+ + I LP V +L+ + +YC+
Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCR 77
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H +VP + ++ K +D F+++D L +L AA+ L +K L
Sbjct: 78 FH-QVPGRSN-----------------KERKVYDEKFIRMDTKRLCELTSAADSLQLKPL 119
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 152
+DLT + +A +I+GKTPEEIR+ F++ +D T
Sbjct: 120 VDLTSRALARIIEGKTPEEIREIFHLPDDLT 150
>WB|WBGene00004826 [details] [associations]
symbol:skr-20 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 2 SSPKMIVLKSCDGESFEVEEA-----VALESTTIKHMIEDDCADNGIP-LPNVTGKILAK 55
S+P + LKS DG+ F VE + I H + D + P L I+
Sbjct: 6 SAP-LYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQA 64
Query: 56 VVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANY 115
V+E+ + + P + D WD F V+ LF L+ A++
Sbjct: 65 VIEWLYHYQDNPLARRDSKIRY-----------HDFSEWDKQFFNVESGVLFALLNASHA 113
Query: 116 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
L ++ L+++ C A++I+GK+ EEIRK + I++D
Sbjct: 114 LGVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSD 148
>UNIPROTKB|G5EE98 [details] [associations]
symbol:skr-20 "Protein SKR-20" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 2 SSPKMIVLKSCDGESFEVEEA-----VALESTTIKHMIEDDCADNGIP-LPNVTGKILAK 55
S+P + LKS DG+ F VE + I H + D + P L I+
Sbjct: 6 SAP-LYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQA 64
Query: 56 VVEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANY 115
V+E+ + + P + D WD F V+ LF L+ A++
Sbjct: 65 VIEWLYHYQDNPLARRDSKIRY-----------HDFSEWDKQFFNVESGVLFALLNASHA 113
Query: 116 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKND 150
L ++ L+++ C A++I+GK+ EEIRK + I++D
Sbjct: 114 LGVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSD 148
>TAIR|locus:2050709 [details] [associations]
symbol:SK20 "AT2G45950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 PANTHER:PTHR11165 SUPFAM:SSF81382
EMBL:AC004665 EMBL:AF370493 EMBL:AY081697 IPI:IPI00524579
IPI:IPI00846808 IPI:IPI00877396 PIR:T02452 RefSeq:NP_001078065.1
RefSeq:NP_566058.2 UniGene:At.12716 UniGene:At.49380
ProteinModelPortal:A8MQG7 SMR:A8MQG7 IntAct:A8MQG7
EnsemblPlants:AT2G45950.2 GeneID:819203 KEGG:ath:AT2G45950
TAIR:At2g45950 HOGENOM:HOG000034103 InParanoid:A8MQG7 OMA:DEIDPAM
PhylomeDB:A8MQG7 ProtClustDB:CLSN2689298 Genevestigator:A8MQG7
Uniprot:A8MQG7
Length = 352
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 44/151 (29%), Positives = 82/151 (54%)
Query: 7 IVLKSCDGESFEVEEAVALESTTI-KHMIEDDCA---DNGIPLPN-VTGKILAKVVEYCK 61
I L++ DG +VE+ VA+ I + +I+ ++ I LP V + + +++YC+
Sbjct: 18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCR 77
Query: 62 KHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGL 121
H ++P + ++ K++D F+++D L +L AA+ L +K L
Sbjct: 78 FH-QLPGRSN-----------------KERKTYDERFIRMDTKRLCELTSAADSLQLKPL 119
Query: 122 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 152
+DLT + +A +I+GK PEEIR+ F++ +D T
Sbjct: 120 VDLTSRALARIIEGKNPEEIREIFHLPDDLT 150
>WB|WBGene00004827 [details] [associations]
symbol:skr-21 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 PANTHER:PTHR11165 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z70210 PIR:T23515
RefSeq:NP_510194.1 ProteinModelPortal:Q21367 SMR:Q21367
IntAct:Q21367 STRING:Q21367 EnsemblMetazoa:K08H2.1 GeneID:181447
KEGG:cel:CELE_K08H2.1 UCSC:K08H2.1 CTD:181447 WormBase:K08H2.1
eggNOG:KOG1724 HOGENOM:HOG000017727 InParanoid:Q21367 OMA:MKDSAQP
NextBio:913982 ArrayExpress:Q21367 Uniprot:Q21367
Length = 176
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 9 LKSCDGESFEVEEAVALESTTIKHMIEDDCADNGI-PLP---NVTGKILAKVVEYCKKHV 64
++SCDG+ F VE+ +S ++ +N + P P ++ +L K++E+C H
Sbjct: 12 IQSCDGQVFAVEDWFIQKSKCFSVVLAQ--MNNLVQPHPLKTSICSFVLVKIIEWCYHHR 69
Query: 65 EVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDL 124
QD + L +WD F++ + A L L AA L I GLLD+
Sbjct: 70 N--EDQDHA--------------QRILTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDV 113
Query: 125 TCQTVADMIKGKTPEEIR 142
C+ V+ M+ G+T E++
Sbjct: 114 ACRAVSIML-GRTLNEVK 130
>WB|WBGene00018935 [details] [associations]
symbol:skr-18 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0002009 GO:GO:0006898 GO:GO:0040010 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:FO081484 RefSeq:NP_741300.1 UniGene:Cel.25436
ProteinModelPortal:Q8WSN2 SMR:Q8WSN2 STRING:Q8WSN2
EnsemblMetazoa:F56B3.12 GeneID:260116 KEGG:cel:CELE_F56B3.12
CTD:260116 WormBase:F56B3.12 InParanoid:Q8WSN2 NextBio:952880
Uniprot:Q8WSN2
Length = 183
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 46/152 (30%), Positives = 71/152 (46%)
Query: 4 PKMIVLKSCDGESFEVE-EAVALEST---TIKHMIED--DCADNGIPLP-NVTGKILAKV 56
P+++ L S +GE + + A+ L ST TIK + D DCA+ P+P + L +
Sbjct: 26 PRLLQLASSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIK-PIPVDEHEYTLDLL 84
Query: 57 VEYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKV-DQATLFDLILAANY 115
+++C +H D + SWD F V L +I AA
Sbjct: 85 IKWCDQH----KGDDPEIAKAEKGKKKVV-----IPSWDQHFFSVLPMGNLLAVIKAAYD 135
Query: 116 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNI 147
L+I GL++ QTVA I GK+ EE+R+ F +
Sbjct: 136 LDITGLVNYGTQTVASRINGKSAEEMREIFQL 167
>UNIPROTKB|E5RI56 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 PANTHER:PTHR11165
HGNC:HGNC:10899 ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336
IPI:IPI00973884 ProteinModelPortal:E5RI56 SMR:E5RI56
Ensembl:ENST00000519718 ArrayExpress:E5RI56 Bgee:E5RI56
Uniprot:E5RI56
Length = 91
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 7 IVLKSCDGESFEVEEAVALESTTIKHMIED-----DCADNGIPLPNVTGKILAK 55
I L+S DGE FEV+ +A +S TIK M+ED + D+ +PLPNV IL K
Sbjct: 38 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 91
>SGD|S000005967 [details] [associations]
symbol:ELC1 "Elongin C, conserved among eukaryotes"
species:4932 "Saccharomyces cerevisiae" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0070449 "elongin complex" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IDA;IMP] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IPI] [GO:0070911 "global
genome nucleotide-excision repair" evidence=IMP] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 SMART:SM00512 SGD:S000005967
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0070911 EMBL:BK006949 GO:GO:0042787 GO:GO:0031463 EMBL:U44030
GO:GO:0070449 eggNOG:NOG298860 GeneTree:ENSGT00390000011717
HOGENOM:HOG000216525 KO:K03872 OMA:PGQFSEN OrthoDB:EOG405W9Q
EMBL:AB007691 EMBL:AY558329 PIR:JC5792 RefSeq:NP_015279.1 PDB:1HV2
PDBsum:1HV2 ProteinModelPortal:Q03071 SMR:Q03071 DIP:DIP-6531N
IntAct:Q03071 MINT:MINT-708160 STRING:Q03071 PaxDb:Q03071
EnsemblFungi:YPL046C GeneID:856061 KEGG:sce:YPL046C CYGD:YPL046c
EvolutionaryTrace:Q03071 NextBio:981038 Genevestigator:Q03071
GermOnline:YPL046C Uniprot:Q03071
Length = 99
Score = 73 (30.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 3 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADN-G-IPLPNVTGKILAKVVEY 59
S + L S D + +E+ + A+ S T+K MIE ++ G I L IL K VEY
Sbjct: 2 SQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEY 60
Score = 37 (18.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 7/11 (63%), Positives = 11/11 (100%)
Query: 108 DLILAANYLNI 118
+L+LAA+YL+I
Sbjct: 89 ELLLAADYLSI 99
>DICTYBASE|DDB_G0284889 [details] [associations]
symbol:DDB_G0284889 species:44689 "Dictyostelium
discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
Pfam:PF01466 dictyBase:DDB_G0284889 EMBL:AAFI02000073
Gene3D:3.30.710.10 InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 RefSeq:XP_639912.1
ProteinModelPortal:Q54P05 EnsemblProtists:DDB0186240 GeneID:8624824
KEGG:ddi:DDB_G0284889 InParanoid:Q54P05 OMA:TEPRDEN Uniprot:Q54P05
Length = 404
Score = 92 (37.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 94 WDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFN 146
+D +F++ L +L A+ +L+IK L+ LT + +A I K+ EE+R+TF+
Sbjct: 155 FDFNFIQKKPLNLCELASASYFLDIKSLVSLTSKEIATQISQKSAEELRQTFS 207
Score = 49 (22.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 1 MSSPKMIVLKSCDGESFEVE-EAVALESTTIKHMIE 35
M + K +++ S D + +E+E E + T+K++++
Sbjct: 46 MKNSKRVIILSSDNQEYELETELIINMCKTVKNIVK 81
Score = 48 (22.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 13 DGES-FEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKH 63
DGES F E L S I E++ I ++ G +L ++E+CK H
Sbjct: 97 DGESIFHKREDKLLAS--INKNTEEEIK---IYFSDIRGCVLNSILEFCKFH 143
>FB|FBgn0034904 [details] [associations]
symbol:CG15800 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072 Pfam:PF01466
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 KO:K03094
PANTHER:PTHR11165 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
RefSeq:NP_611828.1 UniGene:Dm.33986 ProteinModelPortal:Q9W1J7
SMR:Q9W1J7 IntAct:Q9W1J7 MINT:MINT-4080370 STRING:Q9W1J7
PRIDE:Q9W1J7 EnsemblMetazoa:FBtr0072245 GeneID:37763
KEGG:dme:Dmel_CG15800 UCSC:CG15800-RA FlyBase:FBgn0034904
InParanoid:Q9W1J7 OMA:DWDKEFL OrthoDB:EOG415DWP PhylomeDB:Q9W1J7
GenomeRNAi:37763 NextBio:805295 Bgee:Q9W1J7 Uniprot:Q9W1J7
Length = 157
Score = 95 (38.5 bits), Expect = 0.00074, P = 0.00074
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 6 MIVLKSCDGESFEVEEAVALESTTIKHM-----IEDDCADNGIPLPNVTGKILAKVV--- 57
M+ ++ DG + V A+ +S I+ M + +D D +PL + +L K++
Sbjct: 1 MVRFETRDGRTISVNLALLEKSLVIREMCRVGQVPED-EDFVLPLHGIHSNVLLKILLWA 59
Query: 58 EYCKKHVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLN 117
EY +KH E P D E + WD +F++V+ ++ ++ NYL+
Sbjct: 60 EYHEKHEE-PAWVDSKDPLPAEEI------ELQISDWDKEFLRVEIDSICKIMEGCNYLD 112
Query: 118 IKGLLDLTCQTVADMIKGKTPE 139
I L L Q + + + PE
Sbjct: 113 IPWLYKLCAQKLV-FLSSREPE 133
>WB|WBGene00004825 [details] [associations]
symbol:skr-19 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440518 RefSeq:NP_510193.4 UniGene:Cel.184
ProteinModelPortal:G5EC92 SMR:G5EC92 EnsemblMetazoa:R12H7.3
GeneID:181446 KEGG:cel:CELE_R12H7.3 CTD:181446 WormBase:R12H7.3
OMA:RKVIEWC Uniprot:G5EC92
Length = 155
Score = 94 (38.1 bits), Expect = 0.00098, P = 0.00098
Identities = 35/139 (25%), Positives = 55/139 (39%)
Query: 9 LKSCDGESFEVEEAVALESTTIKHMIED---DC--ADNGIPLP-NVTGKILAKVVEYCKK 62
L+S DG+ F + I+ + + D AD P+ + ++ KV+E+C
Sbjct: 12 LRSTDGQRFLADRRTIGMIGRIEDLFRNAGLDLIPADQLQPIQLEIPATVMRKVIEWCDH 71
Query: 63 HVEVPTTQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLL 122
H P + D+ WD F+ V LFD+I AA + GL
Sbjct: 72 HKHDPPYDESEPET------------NDIPDWDASFLMVRHNMLFDIIRAARDFTVPGLF 119
Query: 123 DLTCQTVADMIKGKTPEEI 141
+ C+ V G+ P EI
Sbjct: 120 AMCCRVV-----GQNPREI 133
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 143 0.00091 102 3 11 22 0.48 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 590 (63 KB)
Total size of DFA: 150 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.37u 0.08s 13.45t Elapsed: 00:00:03
Total cpu time: 13.38u 0.08s 13.46t Elapsed: 00:00:03
Start: Fri May 10 05:56:23 2013 End: Fri May 10 05:56:26 2013