BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030963
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3SZX8|CCD25_BOVIN Coiled-coil domain-containing protein 25 OS=Bos taurus GN=CCDC25
PE=2 SV=1
Length = 208
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 136/164 (82%), Gaps = 1/164 (0%)
Query: 1 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
MVFYF + + YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRLHKG+ I
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLHKGEKI 60
Query: 60 DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH K V+ V
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLR 163
VEK++NEI+NRL KTK+ER PDL+AE+E + ER E+K Q++
Sbjct: 121 TVEKKVNEILNRLEKTKMERFPDLEAEKECRDHEERNEKKAQIQ 164
>sp|Q5R9S1|CCD25_PONAB Coiled-coil domain-containing protein 25 OS=Pongo abelii GN=CCDC25
PE=2 SV=2
Length = 208
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Query: 1 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
MVFYF + + YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60
Query: 60 DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH K V+ V
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLR 163
VEK++NEI+NRL KTKVER PDL AE+E + ER E+K Q++
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQ 164
>sp|Q86WR0|CCD25_HUMAN Coiled-coil domain-containing protein 25 OS=Homo sapiens GN=CCDC25
PE=1 SV=2
Length = 208
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Query: 1 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
MVFYF + + YTI+MG DKYENE+LIK+G+PEDIWFHVDK+SSAHVYLRLHKG+ I
Sbjct: 1 MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDKLSSAHVYLRLHKGENI 60
Query: 60 DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH K V+ V
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLR 163
VEK++NEI+NRL KTKVER PDL AE+E + ER E+K Q++
Sbjct: 121 TVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKKAQIQ 164
>sp|Q7T312|CCD25_DANRE Coiled-coil domain-containing protein 25 OS=Danio rerio GN=ccdc25
PE=1 SV=1
Length = 207
Score = 232 bits (591), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 110/163 (67%), Positives = 133/163 (81%)
Query: 1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
MVFYF + + +TI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLR+ KG TID
Sbjct: 1 MVFYFTSAVVSPPHTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRMPKGTTID 60
Query: 61 DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
DI + VL DC QLVK NSIQG K+NNI++VYTPW+NLKKTA MD+GQ+GFH K V+ V
Sbjct: 61 DIPKEVLIDCVQLVKNNSIQGCKMNNINIVYTPWSNLKKTADMDIGQIGFHRQKEVKIVA 120
Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLR 163
VEK+INEIVNRL KTK ER PDL AE+E+ + ER E+K Q++
Sbjct: 121 VEKKINEIVNRLEKTKEERYPDLAAEKESRDREERNEKKAQIQ 163
>sp|Q78PG9|CCD25_MOUSE Coiled-coil domain-containing protein 25 OS=Mus musculus GN=Ccdc25
PE=1 SV=1
Length = 208
Score = 232 bits (591), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 134/164 (81%), Gaps = 1/164 (0%)
Query: 1 MVFYFKARP-EAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
MVFYF + + YTI+MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL KG+ I
Sbjct: 1 MVFYFTSSSVNSSTYTIYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKGEKI 60
Query: 60 DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
+DI + VL DCA LVKANSIQG K+NN++VVYTPW+NLKKTA MDVGQ+GFH K V+ V
Sbjct: 61 EDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTADMDVGQIGFHRQKDVKIV 120
Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLR 163
VEK++NEI+NRL KTK+E+ PDL AE+E + ER E+K Q++
Sbjct: 121 TVEKKVNEILNRLEKTKLEKFPDLAAEKEGRDREERNEKKAQIQ 164
>sp|Q6GLE1|CCD25_XENTR Coiled-coil domain-containing protein 25 OS=Xenopus tropicalis
GN=ccdc25 PE=2 SV=1
Length = 206
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/163 (68%), Positives = 135/163 (82%), Gaps = 1/163 (0%)
Query: 1 MVFYFKARPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTID 60
MVFYF + + YT++MG DKYENE+LIKYG+PEDIWFHVDK+SSAHVYLRL K QTI+
Sbjct: 1 MVFYFTSNVISPPYTMYMGKDKYENEDLIKYGWPEDIWFHVDKLSSAHVYLRLQKDQTIE 60
Query: 61 DISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTVK 120
DI + VL DCAQLVKANSIQG K+NNI+VVYTPWANLKKTA MD+GQ+GFH K V+T+
Sbjct: 61 DIPKEVLLDCAQLVKANSIQGCKMNNINVVYTPWANLKKTADMDIGQIGFHRQKDVKTMT 120
Query: 121 VEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLR 163
VEK +++IVNRL KTK ER PDL AE+EA + ER E+K Q++
Sbjct: 121 VEK-VSKIVNRLEKTKDERFPDLAAEKEARDREERNEKKAQIQ 162
>sp|Q55D55|CCD25_DICDI Coiled-coil domain-containing protein 25 homolog OS=Dictyostelium
discoideum GN=ccdc25 PE=3 SV=1
Length = 206
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 126/166 (75%), Gaps = 4/166 (2%)
Query: 1 MVFYFKA-RPEAGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYLRLHKGQTI 59
MV YFK PE Y +MG+DK+ENE+LIKYG+PED+WFHV+ +SSAHVYLRL KG+T
Sbjct: 1 MVLYFKLIDPE---YICYMGIDKFENEDLIKYGWPEDVWFHVNDLSSAHVYLRLRKGETW 57
Query: 60 DDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTV 119
+DI +LE+C QLVK NSIQG K ++D+VYTPWANLKKTA M+ GQV +HN + V+ V
Sbjct: 58 NDIPANILEECCQLVKQNSIQGCKEASVDIVYTPWANLKKTAGMEAGQVLYHNEREVKYV 117
Query: 120 KVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDK 165
+ ++ ++I+NR+ KT+ +R+ DL ER++ + +ER E++ + +K
Sbjct: 118 RNVRKDSKIINRIEKTREKREVDLMHERDSRDKSERHEKRKEQEEK 163
>sp|P40206|JLP2_YEAST Protein JLP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JLP2 PE=1 SV=2
Length = 208
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 95/143 (66%), Gaps = 5/143 (3%)
Query: 1 MVFYFKARPE--AGDYTIFMGLDKYENEELIKYGFPE--DIWFHVDKMSSAHVYLRLHKG 56
MV++++++P + Y I MG DK+EN+ LIK+ + E +WFH DK SS HVYL+L
Sbjct: 1 MVYFYESKPTEYSTPYQIVMGKDKFENDLLIKWSYRELNYVWFHADKYSSGHVYLKLRPN 60
Query: 57 Q-TIDDISEGVLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKM 115
+ TIDDI + V+ DC QL K+ SIQGNK+ ++ TPW NL+K M+ G+V F + +
Sbjct: 61 EKTIDDIPQEVICDCLQLCKSESIQGNKMPQCTILITPWHNLRKNRYMNPGEVSFKSLRQ 120
Query: 116 VRTVKVEKRINEIVNRLNKTKVE 138
R ++ R N+I+NRL KT+VE
Sbjct: 121 CRKMECGARDNKILNRLAKTRVE 143
>sp|A4R2R1|NST1_MAGO7 Stress response protein NST1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=NST1 PE=3 SV=2
Length = 1311
Score = 32.7 bits (73), Expect = 1.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 114 KMVRTVKVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQLRDKVSN 168
K R +K E+ E + +K ++E++ +KAE+EA A +AER Q ++N
Sbjct: 741 KAARELK-EREARERKEKADKERLEKEAKIKAEKEAREAQRKAERASQKATTLAN 794
>sp|A6VNB3|SYR_ACTSZ Arginine--tRNA ligase OS=Actinobacillus succinogenes (strain ATCC
55618 / 130Z) GN=argS PE=3 SV=1
Length = 575
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 118 TVKVEKRINEIVNRLNKTKVERKPDLKAEREAA 150
TVK++ ++E V R +K ER PDL AE +AA
Sbjct: 387 TVKLKDLLDEAVERADKLIAERNPDLTAEEKAA 419
>sp|A7E2F4|GOG8A_HUMAN Golgin subfamily A member 8A OS=Homo sapiens GN=GOLGA8A PE=2 SV=3
Length = 631
Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 117 RTVKVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQ 161
R++K+ R+N+ + L + K + + L+ E++A N ++AER+L+
Sbjct: 109 RSIKIS-RLNDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELE 152
>sp|A8MQT2|GOG8B_HUMAN Golgin subfamily A member 8B OS=Homo sapiens GN=GOLGA8B PE=2 SV=2
Length = 603
Score = 30.4 bits (67), Expect = 5.5, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 117 RTVKVEKRINEIVNRLNKTKVERKPDLKAEREAANAAERAERKLQ 161
R++K+ R+N+ + L + K + + L+ E++A N ++AER+L+
Sbjct: 81 RSIKIS-RLNDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELE 124
>sp|Q6R7C8|Y101_OSHVF Uncharacterized protein ORF101 OS=Ostreid herpesvirus 1 (isolate
France) GN=ORF101 PE=4 SV=1
Length = 209
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 73 LVKANSIQGNKVNN-----IDVVYTPWANLKKTASMD-VGQVGFHNPKMVRTVKVEKRI 125
++K S QG+KV+ +D++YTPW ++K+ A+MD + + F N + T +KR+
Sbjct: 61 ILKTESRQGSKVDYNRDCIVDMIYTPW-DVKEYATMDKMLFLKFSNGARLATTYNKKRL 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,306,521
Number of Sequences: 539616
Number of extensions: 2311409
Number of successful extensions: 8792
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 8662
Number of HSP's gapped (non-prelim): 100
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)