Query 030966
Match_columns 168
No_of_seqs 126 out of 182
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 11:15:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030966.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030966hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3bvua1 a.8.3.1 (A:412-522) Go 19.0 19 0.0014 24.2 1.3 25 133-157 4-30 (111)
2 d1rl6a2 d.141.1.1 (A:82-170) R 17.7 12 0.00086 25.2 -0.1 13 124-136 3-15 (89)
3 d1xkta_ c.69.1.22 (A:) Fatty a 16.3 34 0.0025 22.4 2.0 34 90-123 83-116 (286)
4 d2j01h2 d.141.1.1 (H:83-171) R 16.2 12 0.00086 25.2 -0.5 19 124-142 3-21 (89)
5 d2ebfx3 d.3.1.17 (X:1094-1285) 14.7 34 0.0025 25.3 1.8 21 142-162 39-59 (192)
6 d2zjre1 d.141.1.1 (E:83-172) R 13.4 17 0.0013 24.4 -0.2 18 124-141 3-20 (90)
7 d2qamg2 d.141.1.1 (G:82-176) R 13.1 16 0.0012 24.8 -0.4 19 124-142 3-21 (95)
8 d1ow5a_ a.60.1.2 (A:) Serine/t 12.2 16 0.0012 21.8 -0.6 16 144-159 45-60 (60)
9 g1o7d.1 a.8.3.1 (B:385-422,C:4 11.5 39 0.0029 21.6 1.2 26 133-158 4-31 (95)
10 d1gyxa_ d.80.1.1 (A:) 4-oxaloc 11.2 59 0.0043 20.6 2.0 25 143-167 12-36 (76)
No 1
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=18.96 E-value=19 Score=24.15 Aligned_cols=25 Identities=12% Similarity=0.149 Sum_probs=18.8
Q ss_pred eeehhhhhhhcccccHH--HHHHHHHH
Q 030966 133 YTLWFSWRYLLFKKNRD--ELATKIEE 157 (168)
Q Consensus 133 Ys~WFvyRyLL~~~~R~--eL~~ki~~ 157 (168)
|||+|+.|--++.-+|+ .+++..+.
T Consensus 4 WtG~yTSr~~lK~~~R~~e~~L~~~E~ 30 (111)
T d3bvua1 4 WSGYYTSRPYHKRMDRVLMHYVRAAEM 30 (111)
T ss_dssp CCGGGTSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhChHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999994 34444433
No 2
>d1rl6a2 d.141.1.1 (A:82-170) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=17.72 E-value=12 Score=25.19 Aligned_cols=13 Identities=46% Similarity=0.812 Sum_probs=9.9
Q ss_pred chheehhheeeeh
Q 030966 124 KLMEVVGLGYTLW 136 (168)
Q Consensus 124 ~llELVGlgYs~W 136 (168)
.-|||+|+||=+-
T Consensus 3 k~L~lvGVGYra~ 15 (89)
T d1rl6a2 3 KALELVGVGYRAS 15 (89)
T ss_dssp EEEEEESTTCEEE
T ss_pred EEEEEEEEEEEEE
Confidence 4589999999653
No 3
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.25 E-value=34 Score=22.45 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=22.3
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 030966 90 EDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFP 123 (168)
Q Consensus 90 edK~~v~~~g~gaiVal~v~~aVl~AId~IPLlp 123 (168)
..++.+++...|+.||+.++.-.-+.+.++.++.
T Consensus 83 ~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 83 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred CCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 4567777788999999999988777666665554
No 4
>d2j01h2 d.141.1.1 (H:83-171) Ribosomal protein L6 {Thermus thermophilus [TaxId: 274]}
Probab=16.19 E-value=12 Score=25.24 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=13.8
Q ss_pred chheehhheeeehhhhhhh
Q 030966 124 KLMEVVGLGYTLWFSWRYL 142 (168)
Q Consensus 124 ~llELVGlgYs~WFvyRyL 142 (168)
.-|||+|+||=+.---++|
T Consensus 3 k~LelvGVGYra~~~g~~L 21 (89)
T d2j01h2 3 KELLIKGIGYRARLVGRAL 21 (89)
T ss_dssp CEECCCSSSCEECCBTTBE
T ss_pred EEEEEEEEEEEEEEeCCEE
Confidence 4589999999876554444
No 5
>d2ebfx3 d.3.1.17 (X:1094-1285) Dermonecrotic toxin, ToxA {Pasteurella multocida [TaxId: 747]}
Probab=14.75 E-value=34 Score=25.33 Aligned_cols=21 Identities=33% Similarity=0.490 Sum_probs=17.1
Q ss_pred hcccccHHHHHHHHHHHhhhh
Q 030966 142 LLFKKNRDELATKIEELKQQV 162 (168)
Q Consensus 142 LL~~~~R~eL~~ki~~lk~~I 162 (168)
-+...-|+||.+||+.+|+++
T Consensus 39 svsedlreelmqkidaikndv 59 (192)
T d2ebfx3 39 SVSEDLREELMQKIDAIKNDV 59 (192)
T ss_dssp TSCHHHHHHHHHHHHHHHTCH
T ss_pred hhhHHHHHHHHHHHHHHhccc
Confidence 345566999999999999875
No 6
>d2zjre1 d.141.1.1 (E:83-172) Ribosomal protein L6 {Deinococcus radiodurans [TaxId: 1299]}
Probab=13.40 E-value=17 Score=24.36 Aligned_cols=18 Identities=17% Similarity=0.303 Sum_probs=11.9
Q ss_pred chheehhheeeehhhhhh
Q 030966 124 KLMEVVGLGYTLWFSWRY 141 (168)
Q Consensus 124 ~llELVGlgYs~WFvyRy 141 (168)
.-|||+|+||=+-..-++
T Consensus 3 k~L~lvGVGYra~~~g~~ 20 (90)
T d2zjre1 3 INLELRGVGFRAKLTGKA 20 (90)
T ss_dssp EEEECBSTTCCCCCBTTB
T ss_pred EEEEEEEEEEEEEecCCE
Confidence 358999999976443333
No 7
>d2qamg2 d.141.1.1 (G:82-176) Ribosomal protein L6 {Escherichia coli [TaxId: 562]}
Probab=13.06 E-value=16 Score=24.79 Aligned_cols=19 Identities=26% Similarity=0.471 Sum_probs=13.0
Q ss_pred chheehhheeeehhhhhhh
Q 030966 124 KLMEVVGLGYTLWFSWRYL 142 (168)
Q Consensus 124 ~llELVGlgYs~WFvyRyL 142 (168)
.-|||+|+||=+..-=++|
T Consensus 3 k~L~lvGVGYRa~~~g~~L 21 (95)
T d2qamg2 3 KKLQLVGVGYRAAVKGNVI 21 (95)
T ss_dssp CCCCBCSSSCCCCCCTTEE
T ss_pred EEEEEEeEEEEEEEcCCEE
Confidence 4589999999776543333
No 8
>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=12.15 E-value=16 Score=21.78 Aligned_cols=16 Identities=13% Similarity=0.113 Sum_probs=10.7
Q ss_pred ccccHHHHHHHHHHHh
Q 030966 144 FKKNRDELATKIEELK 159 (168)
Q Consensus 144 ~~~~R~eL~~ki~~lk 159 (168)
....|..++.+|+.||
T Consensus 45 ~~ghr~ril~~i~~Lk 60 (60)
T d1ow5a_ 45 KIGDRLKILRKSKSFQ 60 (60)
T ss_dssp CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhC
Confidence 3357777777777664
No 9
>g1o7d.1 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mannosidase {Cow (Bos taurus) [TaxId: 9913]}
Probab=11.47 E-value=39 Score=21.61 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=19.6
Q ss_pred eeehhhhhhhcccccH--HHHHHHHHHH
Q 030966 133 YTLWFSWRYLLFKKNR--DELATKIEEL 158 (168)
Q Consensus 133 Ys~WFvyRyLL~~~~R--~eL~~ki~~l 158 (168)
|||.|+.|--++.-+| +.++..++.+
T Consensus 4 wtG~yTSr~~lK~~nR~~e~~L~~~E~l 31 (95)
T g1o7d.1 4 WTGYFSSRPALKRYERLSYNFLQVCNQL 31 (95)
T ss_dssp SCGGGTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeehhCcHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999 3455554433
No 10
>d1gyxa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase homologue YdcE {Escherichia coli [TaxId: 562]}
Probab=11.21 E-value=59 Score=20.62 Aligned_cols=25 Identities=28% Similarity=0.385 Sum_probs=21.1
Q ss_pred cccccHHHHHHHHHHHhhhhcCCCC
Q 030966 143 LFKKNRDELATKIEELKQQVLGSND 167 (168)
Q Consensus 143 L~~~~R~eL~~ki~~lk~~I~G~~~ 167 (168)
|..+.+++|.++|.+.-.+++|...
T Consensus 12 lT~EQK~~L~~~iT~a~~~~lg~~~ 36 (76)
T d1gyxa_ 12 LDEQQKAALAADITDVIIRHLNSKD 36 (76)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCC
Confidence 3567889999999999999999653
Done!