BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030973
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54F15|NUBPL_DICDI Iron-sulfur protein NUBPL OS=Dictyostelium discoideum GN=nubpl PE=3
SV=1
Length = 323
Score = 179 bits (454), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 111/142 (78%), Gaps = 3/142 (2%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMM--KIDQ 84
I+G+K++IAV+S KGGVGKST AVN+A+ L+S L VGLLD DV+GPS+P+MM K +
Sbjct: 53 IEGIKNIIAVSSAKGGVGKSTCAVNIALGLSSH-NLSVGLLDVDVFGPSIPLMMDLKNHE 111
Query: 85 KPEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILV 144
KP + +M+P++NYG+KCMSMGFLV P++WRGPMV SAL K+ R+ DWG+LD+LV
Sbjct: 112 KPFTNELNQMIPLQNYGIKCMSMGFLVNEDDPIIWRGPMVGSALEKLLRQTDWGHLDVLV 171
Query: 145 IDMPPGTGDAQLTTTQTLQLSG 166
D+PPGTGDA LT Q + L+G
Sbjct: 172 CDLPPGTGDAILTMCQRVPLTG 193
>sp|Q8TB37|NUBPL_HUMAN Iron-sulfur protein NUBPL OS=Homo sapiens GN=NUBPL PE=1 SV=3
Length = 319
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 111/145 (76%), Gaps = 1/145 (0%)
Query: 23 KDLKIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLK-VGLLDADVYGPSVPMMMK 81
K I+GVK VI VASGKGGVGKSTTAVNLA+ALA+ K +GLLD DVYGPSVP MM
Sbjct: 59 KQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMN 118
Query: 82 IDQKPEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLD 141
+ PE+++ M P+ NYG+ CMSMGFLV S PVVWRG MVMSA+ K+ R+VDWG LD
Sbjct: 119 LKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLD 178
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLSG 166
LV+DMPPGTGD QL+ +Q + ++G
Sbjct: 179 YLVVDMPPGTGDVQLSVSQNIPITG 203
>sp|Q9CWD8|NUBPL_MOUSE Iron-sulfur protein NUBPL OS=Mus musculus GN=Nubpl PE=2 SV=2
Length = 319
Score = 173 bits (438), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 113/145 (77%), Gaps = 1/145 (0%)
Query: 23 KDLKIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLK-VGLLDADVYGPSVPMMMK 81
K I+GV++VI VASGKGGVGKSTTAVNLA+ALA+ K VGLLD DVYGPS+P MM
Sbjct: 59 KQKPIEGVREVIVVASGKGGVGKSTTAVNLALALAANDSSKAVGLLDVDVYGPSIPKMMN 118
Query: 82 IDQKPEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLD 141
+ PE++ + M P+ NYG+ CMSMGFLV ++P+VWRG MVMSA+ K+ R+VDWG LD
Sbjct: 119 LRGNPELSPNNLMRPLLNYGIACMSMGFLVEETAPLVWRGLMVMSAIEKLLRQVDWGQLD 178
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLSG 166
LV+DMPPGTGD QL+ +Q + +SG
Sbjct: 179 YLVVDMPPGTGDVQLSVSQNIPISG 203
>sp|Q6CE48|IND1_YARLI Iron-sulfur protein IND1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=IND1 PE=1 SV=1
Length = 312
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 103/140 (73%), Gaps = 1/140 (0%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
I GVK I V+S KGGVGKST +VN A++LA + L+VGLLD D++GPS+P M + +P
Sbjct: 63 IAGVKKTIVVSSAKGGVGKSTVSVNTALSLAKRG-LRVGLLDVDIFGPSIPTMFGLSGEP 121
Query: 87 EVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVID 146
+T + K++P+ +G++ MSMGFLV + V WRG +V AL ++ ++VDWG LD+LV+D
Sbjct: 122 RMTHEGKLIPMSKFGIQVMSMGFLVDPNKAVAWRGLLVQKALEQLLQDVDWGTLDVLVMD 181
Query: 147 MPPGTGDAQLTTTQTLQLSG 166
+PPGTGD QLT QT+++ G
Sbjct: 182 LPPGTGDVQLTIAQTVKIDG 201
>sp|Q9ZMM5|MRP_HELPJ Protein mrp homolog OS=Helicobacter pylori (strain J99) GN=mrp PE=3
SV=1
Length = 368
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 104/141 (73%), Gaps = 5/141 (3%)
Query: 29 GVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPEV 88
+K V+ ++SGKGGVGKSTT+VNL++ALA+ Q KVGLLDADVYGP++P MM + Q +V
Sbjct: 95 NIKHVVMISSGKGGVGKSTTSVNLSIALANLNQ-KVGLLDADVYGPNIPRMMGL-QNADV 152
Query: 89 TKD---MKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVI 145
D K++P++ +GV MSMG L ++WRGPM+M A+ +M ++ WG+LD+LV+
Sbjct: 153 IMDPSGKKLIPLKAFGVSVMSMGLLYDEGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVV 212
Query: 146 DMPPGTGDAQLTTTQTLQLSG 166
DMPPGTGDAQLT Q + LS
Sbjct: 213 DMPPGTGDAQLTLAQAVPLSA 233
>sp|O24999|MRP_HELPY Protein mrp homolog OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=mrp PE=3 SV=2
Length = 368
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 104/141 (73%), Gaps = 5/141 (3%)
Query: 29 GVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPEV 88
+K V+ ++SGKGGVGKSTT+VNL++ALA+ Q KVGLLDADVYGP++P MM + Q +V
Sbjct: 95 NIKHVVMISSGKGGVGKSTTSVNLSIALANLNQ-KVGLLDADVYGPNIPRMMGL-QSADV 152
Query: 89 TKD---MKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVI 145
D K++P++ +GV MSMG L ++WRGPM+M A+ +M ++ WG+LD+LV+
Sbjct: 153 IMDPSGKKLIPLKAFGVSVMSMGLLYDEGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVV 212
Query: 146 DMPPGTGDAQLTTTQTLQLSG 166
DMPPGTGDAQLT Q + LS
Sbjct: 213 DMPPGTGDAQLTLAQAVPLSA 233
>sp|P45135|MRP_HAEIN Protein mrp homolog OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=mrp PE=3 SV=2
Length = 370
Score = 149 bits (376), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMM-KIDQK 85
+ GVK++IAV+SGKGGVGKS+ +VNLA+AL ++ +VG+LDAD+YGPS+P M+ DQ+
Sbjct: 103 VKGVKNIIAVSSGKGGVGKSSVSVNLALALQAQGA-RVGILDADIYGPSIPHMLGAADQR 161
Query: 86 PEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVI 145
P + + PI+ +G+ S+GFL+ S +WRGPM SAL ++ E W +LD LVI
Sbjct: 162 PTSPDNQHITPIKAHGLSANSIGFLMNEDSATIWRGPMASSALSQLLNETLWDSLDYLVI 221
Query: 146 DMPPGTGDAQLTTTQTLQLSG 166
DMPPGTGD QLT +Q + ++G
Sbjct: 222 DMPPGTGDIQLTLSQQIPVTG 242
>sp|P50863|SALA_BACSU Protein mrp homolog SalA OS=Bacillus subtilis (strain 168) GN=salA
PE=2 SV=1
Length = 352
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 25 LKIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQ 84
L +D +AVASGKGGVGKST +VNLA++LA + KVGL+DAD+YG SVP MM I
Sbjct: 100 LNMDNPPVFLAVASGKGGVGKSTVSVNLAISLA-RLGKKVGLIDADIYGFSVPDMMGITV 158
Query: 85 KPEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILV 144
+P + + K++P+E +GVK MSMGF V ++PVVWRGPM+ L EV+WG +D +V
Sbjct: 159 RPTIEGE-KLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIV 217
Query: 145 IDMPPGTGDAQLTTTQTL 162
+D+PPGTGD L L
Sbjct: 218 LDLPPGTGDVALDVHTML 235
>sp|P0AF08|MRP_ECOLI Protein mrp OS=Escherichia coli (strain K12) GN=mrp PE=3 SV=1
Length = 369
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKID-QK 85
I+GVK++IAV+SGKGGVGKS+TAVNLA+ALA++ KVG+LDAD+YGPS+P M+ + Q+
Sbjct: 103 INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGA-KVGILDADIYGPSIPTMLGAENQR 161
Query: 86 PEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVI 145
P M PI ++G+ S+G+LV + +VWRGPM AL +M +E W +LD LV+
Sbjct: 162 PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVL 221
Query: 146 DMPPGTGDAQLTTTQTLQLSG 166
DMPPGTGD QLT Q + ++G
Sbjct: 222 DMPPGTGDIQLTLAQNIPVTG 242
>sp|P0AF09|MRP_ECOL6 Protein mrp OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=mrp PE=3 SV=1
Length = 369
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKID-QK 85
I+GVK++IAV+SGKGGVGKS+TAVNLA+ALA++ KVG+LDAD+YGPS+P M+ + Q+
Sbjct: 103 INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGA-KVGILDADIYGPSIPTMLGAENQR 161
Query: 86 PEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVI 145
P M PI ++G+ S+G+LV + +VWRGPM AL +M +E W +LD LV+
Sbjct: 162 PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVL 221
Query: 146 DMPPGTGDAQLTTTQTLQLSG 166
DMPPGTGD QLT Q + ++G
Sbjct: 222 DMPPGTGDIQLTLAQNIPVTG 242
>sp|O66946|MRP_AQUAE Protein mrp homolog OS=Aquifex aeolicus (strain VF5) GN=mrp PE=3
SV=1
Length = 364
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 107/143 (74%), Gaps = 3/143 (2%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKID-Q 84
K+ GVK +IAV SGKGGVGKST A NLAVAL S+ KVGLLDADVYGPSVP + + +
Sbjct: 107 KVPGVKHIIAVGSGKGGVGKSTVAANLAVAL-SQLGYKVGLLDADVYGPSVPTLFGLKGE 165
Query: 85 KPEVTKDMKMVPIENYGVKCMSMGFLVPSS-SPVVWRGPMVMSALRKMSREVDWGNLDIL 143
+ V + +++P+E YG+K +S+GF++PS +P++WRGPM+M AL + WGNLD L
Sbjct: 166 RVTVDQFQRIIPVEKYGLKILSIGFMLPSEDTPIIWRGPMLMKALTEFLFSTKWGNLDFL 225
Query: 144 VIDMPPGTGDAQLTTTQTLQLSG 166
V+D+PPGTGD Q+T Q ++L+G
Sbjct: 226 VMDLPPGTGDVQITLAQNVELTG 248
>sp|P72190|YCAB_PSEFR Uncharacterized ATP-binding protein in capB 3'region OS=Pseudomonas
fragi PE=3 SV=1
Length = 287
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 101/139 (72%), Gaps = 3/139 (2%)
Query: 30 VKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQ--KPE 87
VK+++AVASGKGGVGKSTTA NLA+ALA + +VG+LDAD+YGPS +M I + +P+
Sbjct: 38 VKNIVAVASGKGGVGKSTTAANLALALAREGA-RVGILDADIYGPSQGVMFGIAEGTRPK 96
Query: 88 VTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVIDM 147
+ VPIE +GV+ MSM FL ++P+VWRGPMV AL ++ + W +LD LVIDM
Sbjct: 97 IRDQKWFVPIEAHGVEVMSMAFLTDDNTPMVWRGPMVSGALLQLVTQTAWNDLDYLVIDM 156
Query: 148 PPGTGDAQLTTTQTLQLSG 166
PPGTGD QLT Q + ++G
Sbjct: 157 PPGTGDIQLTLAQKVPVAG 175
>sp|Q92JA4|MRP_RICCN Protein mrp homolog OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=mrp PE=3 SV=1
Length = 319
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK +I VASGKGGVGKST + +A L S +VG++DAD+YGPS+P + I++ P
Sbjct: 93 VENVKKIILVASGKGGVGKSTISALIAQQL-SLANYRVGIVDADIYGPSIPHIFGINEVP 151
Query: 87 EVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVID 146
+ TKD +++P+ ++ +S+GF V S ++WRGPM + ++ W NLD L+ID
Sbjct: 152 Q-TKDGRIIPVLAQSIEIISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLIID 210
Query: 147 MPPGTGDAQLTTTQTLQLSGI 167
MPPGTGD L+ + L G+
Sbjct: 211 MPPGTGDIHLSILENYHLDGV 231
>sp|P53383|MRP_SYNY3 Protein mrp homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=mrp PE=3 SV=1
Length = 353
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
Query: 30 VKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKID----QK 85
VK++IA++SGKGGVGKST AVN+AVA ++ VGLLDAD+YGP+ P M+ + Q
Sbjct: 96 VKNIIAISSGKGGVGKSTVAVNVAVA-LAQTGAAVGLLDADIYGPNAPTMLGLSGAAVQV 154
Query: 86 PEVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVI 145
+ + P+ N+G+K +SMGFL+ PV+WRGPM+ +R+ +V+WG LD L++
Sbjct: 155 QNSPQGEVLEPVFNHGIKMVSMGFLIDPDQPVIWRGPMLNGIIRQFLYQVNWGALDYLIV 214
Query: 146 DMPPGTGDAQLTTTQTLQLSG 166
DMPPGTGDAQLT TQ++ ++G
Sbjct: 215 DMPPGTGDAQLTLTQSVPMAG 235
>sp|Q4UKB5|MRP_RICFE Protein mrp homolog OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=mrp PE=3 SV=1
Length = 318
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK +I VASGKGGVGKST + +A L+ + +VG++DAD+YGPS+P + I++ P
Sbjct: 93 VENVKKIILVASGKGGVGKSTISALIAQQLSLE-NYRVGIVDADIYGPSIPHIFGINEVP 151
Query: 87 EVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVID 146
+ TKD +++PI ++ +S+GF V S ++WRGPM + ++ W NLD L+ID
Sbjct: 152 K-TKDGRIIPITVKSIQVISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLIID 210
Query: 147 MPPGTGDAQLTTTQTLQLSGI 167
MPPGTGD L+ + L G+
Sbjct: 211 MPPGTGDIHLSMLENYHLDGV 231
>sp|Q1RHB0|MRP_RICBR Protein mrp homolog OS=Rickettsia bellii (strain RML369-C) GN=mrp
PE=3 SV=1
Length = 318
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK +I VASGKGGVGKST + +A L+ + +VG++DAD+YGPS+P + I++ P
Sbjct: 93 VENVKKIILVASGKGGVGKSTISALIAQQLSLENH-RVGIVDADIYGPSIPHIFGINEVP 151
Query: 87 EVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVID 146
+ T +++P+ ++ +S+GF V + S ++WRGPM + ++ W NLD L+ID
Sbjct: 152 Q-TVGGRIIPVRAKNIEVISIGFFVKNYSAIIWRGPMASKTIYQLLSVTKWDNLDYLIID 210
Query: 147 MPPGTGDAQLTTTQTLQLSGI 167
MPPGTGD L+ + L+G+
Sbjct: 211 MPPGTGDIHLSMLENYHLNGV 231
>sp|P53382|MRP_MYCLE Protein mrp homolog OS=Mycobacterium leprae (strain TN) GN=mrp PE=3
SV=2
Length = 383
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 33 VIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPEVTKDM 92
V VASGKGGVGKST VNLA A+A++ L VG+LDAD++G S+P MM +Q+P + M
Sbjct: 121 VYTVASGKGGVGKSTVTVNLATAIAARG-LAVGVLDADIHGHSIPRMMGSNQRPIQLESM 179
Query: 93 KMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVIDMPPGTG 152
+ PI + VK +S+G ++PV+WRGPM+ AL++ +V WG+LD+L++D+PPGTG
Sbjct: 180 ILPPIV-HEVKVISIGQFTEGNTPVIWRGPMLHRALQQFLSDVYWGDLDVLMLDLPPGTG 238
Query: 153 DAQLTTTQTL 162
D ++ Q +
Sbjct: 239 DIAISVAQLI 248
>sp|Q68XP6|MRP_RICTY Protein mrp homolog OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=mrp PE=3 SV=1
Length = 318
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK +I VASGKGGVGKST + +A L+ + +VG++DAD+YGPS+P + I++ P
Sbjct: 93 VENVKKIILVASGKGGVGKSTISALIAQQLSLE-NYQVGIVDADIYGPSIPHIFGINEIP 151
Query: 87 EVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVID 146
+ T + +++PI ++ +S+GF V + S +++RGPM + ++ W NLD L+ID
Sbjct: 152 K-TVEGRIIPILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQLLSNTRWNNLDYLIID 210
Query: 147 MPPGTGDAQLTTTQTLQLSGI 167
MPPGTGD L+ + L G+
Sbjct: 211 MPPGTGDIHLSMLENYHLDGV 231
>sp|O58667|Y949_PYRHO Uncharacterized ATP-binding protein PH0949 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH0949 PE=3 SV=1
Length = 295
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 94/144 (65%), Gaps = 14/144 (9%)
Query: 34 IAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPEVTKD-- 91
IAV SGKGGVGKST AVNL ALA K VG+LDAD++GP+V M+ +D K EV +
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALA-KMGYFVGILDADIHGPNVAKMLGVD-KEEVYAEKF 90
Query: 92 ----MKMVPI------ENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLD 141
+M+P + +K MSMG +VP PV+WRGP+V A++++ +V WG+LD
Sbjct: 91 DDGHFEMIPPTTDFMGQVTPIKVMSMGMMVPEDQPVIWRGPLVTKAIKQLLGDVKWGSLD 150
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLS 165
++ID PPGTGD LT Q+++L
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIKLD 174
>sp|Q9ZE27|MRP_RICPR Protein mrp homolog OS=Rickettsia prowazekii (strain Madrid E)
GN=mrp PE=3 SV=1
Length = 318
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK +I VASGKGGVGKST + +A L+ + +VG++DAD+YGPS+P + I+ P
Sbjct: 93 VENVKKIILVASGKGGVGKSTISALIAQQLSLE-NYRVGIVDADIYGPSIPHIFGINGIP 151
Query: 87 EVTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVID 146
+ T + ++VPI ++ +S+GF V + S +++RGPM + ++ W NLD L+ID
Sbjct: 152 K-TVEGRIVPILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQLLSNTRWNNLDYLIID 210
Query: 147 MPPGTGDAQLTTTQTLQLSGI 167
MPPGTGD L+ + L G+
Sbjct: 211 MPPGTGDIHLSIIENYHLDGV 231
>sp|Q9RVM9|MRP_DEIRA Protein mrp homolog OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=mrp PE=3 SV=1
Length = 350
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 85/119 (71%), Gaps = 2/119 (1%)
Query: 49 AVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQ-KPEVTKDMKMVPIENYGVKCMSM 107
AVNLA +LA + +VGLLDADVYGPSV M+ Q + +D KM PIE +GV+ +SM
Sbjct: 109 AVNLAASLA-RDGARVGLLDADVYGPSVAHMLGQGQARVTANEDRKMRPIEAHGVRFISM 167
Query: 108 GFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVIDMPPGTGDAQLTTTQTLQLSG 166
L P+ +VWRGPM+ SA+++ ++ WG LD L++D+PPGTGD QL+ TQT+Q++G
Sbjct: 168 ANLSPAGQALVWRGPMLHSAIQQFLKDSAWGELDYLIVDLPPGTGDVQLSLTQTVQVTG 226
>sp|Q57731|Y283_METJA Uncharacterized ATP-binding protein MJ0283 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0283 PE=3 SV=1
Length = 290
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 30 VKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPEVT 89
+K I + SGKGGVGKST VNLA AL + KVG+LDAD++GP++P M+ ++ +
Sbjct: 38 IKHKIVILSGKGGVGKSTVTVNLAAALNLMGK-KVGVLDADIHGPNIPKMLGVENTQPMA 96
Query: 90 KDMKMVPI-ENYGVKCMSMGFLVPSS-SPVVWRGPMVMSALRKMSREVDWGNLDILVIDM 147
+ PI G+K MS+G+L+P +PV+WRGP V A+R+ +V WG LD L+ID
Sbjct: 97 GPAGIFPIVTKDGIKTMSIGYLLPDDKTPVIWRGPKVSGAIRQFLSDVVWGELDYLLIDT 156
Query: 148 PPGTGDAQLTTTQTL 162
PPGTGD QLT Q++
Sbjct: 157 PPGTGDEQLTIMQSI 171
>sp|Q9V0D9|Y851_PYRAB Uncharacterized ATP-binding protein PYRAB08510 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB08510 PE=3 SV=1
Length = 295
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 14/144 (9%)
Query: 34 IAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPEVTKD-- 91
+AV SGKGGVGKST AVNL ALA K VG+LDAD++GP+V M+ + +K E+ +
Sbjct: 33 VAVLSGKGGVGKSTVAVNLTAALA-KMGYFVGILDADIHGPNVAKMLGV-EKEEIYAEKF 90
Query: 92 ----MKMVP-IENY-----GVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLD 141
+M+P + ++ +K MSMG +VP P++WRG +V A++++ +V WG+LD
Sbjct: 91 DDGHFEMIPPMADFMGQVTPIKVMSMGMMVPEDQPIIWRGALVTKAIKQLLGDVKWGSLD 150
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLS 165
++ID PPGTGD LT Q++QL
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIQLD 174
>sp|Q8U1R0|Y1145_PYRFU Uncharacterized ATP-binding protein PF1145 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1145 PE=3 SV=1
Length = 295
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 92/143 (64%), Gaps = 12/143 (8%)
Query: 34 IAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKI---DQKPEVTK 90
IAV SGKGGVGKST AVNL ALA K VG+LDAD++GP+V M I D E +
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALA-KMGYFVGILDADIHGPNVAKMFGIGNTDIYAEKFE 91
Query: 91 D--MKMVP--IENYG----VKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D +M+P ++ G +K MSMG +VP P++WRG +V A++++ +V WG LD
Sbjct: 92 DGHFEMIPPTVDFMGQVTPIKVMSMGMMVPEDQPIIWRGSLVTKAIKQLLGDVMWGELDF 151
Query: 143 LVIDMPPGTGDAQLTTTQTLQLS 165
++ID PPGTGD LT Q++QL
Sbjct: 152 MIIDFPPGTGDEILTVVQSIQLD 174
>sp|P53381|MRP_CLOPE Protein mrp homolog OS=Clostridium perfringens (strain 13 / Type A)
GN=mrp PE=3 SV=2
Length = 284
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 10/144 (6%)
Query: 30 VKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK---- 85
+K+VI V SGKGGVGKST LA LA K KVG+LDAD+ GPS+P I++K
Sbjct: 37 IKNVIGVISGKGGVGKSTVTGILATQLAKK-GYKVGVLDADITGPSMPRFFGINEKRADI 95
Query: 86 ---PEVTKDMKMVPIE-NYGVKCMSMGFLVP-SSSPVVWRGPMVMSALRKMSREVDWGNL 140
K +K VP++ G+K +SM L+ PV+WRGPMV L +M ++ DW L
Sbjct: 96 VAMDSEGKQVKFVPVKTELGIKVISMNLLMEVEDDPVIWRGPMVTGVLNQMFKDTDWEEL 155
Query: 141 DILVIDMPPGTGDAQLTTTQTLQL 164
D L+IDMPPGT D LT QT +
Sbjct: 156 DYLLIDMPPGTSDITLTVMQTFPI 179
>sp|B4IAD1|NUBP2_DROSE Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
sechellia GN=GM22307 PE=3 SV=1
Length = 260
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + L++AL K KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLAL-RKNGFKVGLLDIDLCGPSVPYLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VP+ E+ + MS+GFL+ + PV+WRGP +R+ +V W LD
Sbjct: 61 IFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQLSGIR 168
L+ID PPGT D +T + L+ G
Sbjct: 121 LIIDTPPGTSDEHITVMECLKEVGCH 146
>sp|Q9VPD2|NUBP2_DROME Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
melanogaster GN=CG4858 PE=1 SV=1
Length = 260
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + L++AL K KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLAL-RKNGFKVGLLDIDLCGPSVPYLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VP+ E+ + MS+GFL+ + PV+WRGP +R+ +V W LD
Sbjct: 61 IFQCDDGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQLSGIR 168
L+ID PPGT D +T + L+ G
Sbjct: 121 LIIDTPPGTSDEHITVMECLKEVGCH 146
>sp|B3M9R3|NUBP2_DROAN Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
ananassae GN=GF10354 PE=3 SV=1
Length = 261
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + LA+AL KVGLLD D+ GPSVP ++ ++
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRQTGH-KVGLLDIDLCGPSVPYLLGLEGSD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VPI E+ + MS+GFL+ + + PV+WRGP +R+ +V W LD
Sbjct: 61 IFQCDEGWVPIYTDESQTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQ 163
L+ID PPGT D +T + L+
Sbjct: 121 LIIDTPPGTSDEHITVMECLR 141
>sp|B4QJ46|NUBP2_DROSI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
simulans GN=GD14899 PE=3 SV=1
Length = 260
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + L++AL K KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLAL-RKNGFKVGLLDIDLCGPSVPYLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VP+ E + MS+GFL+ + PV+WRGP +R+ +V W LD
Sbjct: 61 IFQCDEGWVPVYTDEFQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQLSGIR 168
L+ID PPGT D +T + L+ G
Sbjct: 121 LIIDTPPGTSDEHITVMECLKEVGCH 146
>sp|B4N4D9|NUBP2_DROWI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
willistoni GN=GK12055 PE=3 SV=1
Length = 261
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 87/141 (61%), Gaps = 5/141 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + LA+AL KVGLLD D+ GPSVP ++ ++
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRHTGH-KVGLLDIDLCGPSVPYLLGLEGSD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VPI E+ + MS+GFL+ S + PV+WRGP +++ ++V W LD
Sbjct: 61 IYQCDDGWVPIYTDESKTLAVMSIGFLLKSRTDPVIWRGPKKTMMIKQFLQDVKWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQ 163
L+ID PPGT D +T + L+
Sbjct: 121 LIIDTPPGTSDEHITVMECLR 141
>sp|P65441|MRP_MYCTU Protein mrp homolog OS=Mycobacterium tuberculosis GN=mrp PE=3 SV=1
Length = 381
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
Query: 28 DGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPE 87
D + V AVASGKGGVGKST VNLA A+A + L +G+LDAD++G S+P MM +P
Sbjct: 114 DSLTRVYAVASGKGGVGKSTVTVNLAAAMAVRG-LSIGVLDADIHGHSIPRMMGTTDRPT 172
Query: 88 VTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVIDM 147
+ M + PI + VK +S+ ++PVVWRGPM+ AL++ +V WG+LD+L++D+
Sbjct: 173 QVESMILPPIAHQ-VKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDL 231
Query: 148 PPGTGDAQLTTTQ 160
PPGTGD ++ Q
Sbjct: 232 PPGTGDVAISVAQ 244
>sp|P65442|MRP_MYCBO Protein mrp homolog OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=mrp PE=3 SV=1
Length = 381
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
Query: 28 DGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKPE 87
D + V AVASGKGGVGKST VNLA A+A + L +G+LDAD++G S+P MM +P
Sbjct: 114 DSLTRVYAVASGKGGVGKSTVTVNLAAAMAVRG-LSIGVLDADIHGHSIPRMMGTTDRPT 172
Query: 88 VTKDMKMVPIENYGVKCMSMGFLVPSSSPVVWRGPMVMSALRKMSREVDWGNLDILVIDM 147
+ M + PI + VK +S+ ++PVVWRGPM+ AL++ +V WG+LD+L++D+
Sbjct: 173 QVESMILPPIAHQ-VKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDL 231
Query: 148 PPGTGDAQLTTTQ 160
PPGTGD ++ Q
Sbjct: 232 PPGTGDVAISVAQ 244
>sp|P0CO88|NBP35_CRYNJ Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=NBP35 PE=3 SV=1
Length = 336
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
++ V+ I V SGKGGVGKST L+ ALA+ + + G++D D+ GPS+P++M ++
Sbjct: 75 RMSSVRRKILVLSGKGGVGKSTFTAGLSWALAADEECQAGIMDIDICGPSIPLLMGLESS 134
Query: 86 PEVTKDMKMVP---IENYGVKCMSMGFLVPSSS-PVVWRGPMVMSALRKMSREVDWGNLD 141
T P ++N V MS+GFL+PSSS V+WRGP +++ ++V+WG+LD
Sbjct: 135 TIHTSASGWSPAYALDNLAV--MSIGFLLPSSSDAVIWRGPKKNGLIKQFLKDVEWGDLD 192
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLSGI 167
+V+D PPGT D L+ Q L+ +GI
Sbjct: 193 YMVVDTPPGTSDEHLSIVQYLKEAGI 218
>sp|P0CO89|NBP35_CRYNB Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=NBP35 PE=3 SV=1
Length = 336
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
++ V+ I V SGKGGVGKST L+ ALA+ + + G++D D+ GPS+P++M ++
Sbjct: 75 RMSSVRRKILVLSGKGGVGKSTFTAGLSWALAADEECQAGIMDIDICGPSIPLLMGLESS 134
Query: 86 PEVTKDMKMVP---IENYGVKCMSMGFLVPSSS-PVVWRGPMVMSALRKMSREVDWGNLD 141
T P ++N V MS+GFL+PSSS V+WRGP +++ ++V+WG+LD
Sbjct: 135 TIHTSASGWSPAYALDNLAV--MSIGFLLPSSSDAVIWRGPKKNGLIKQFLKDVEWGDLD 192
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLSGI 167
+V+D PPGT D L+ Q L+ +GI
Sbjct: 193 YMVVDTPPGTSDEHLSIVQYLKEAGI 218
>sp|B4IYG8|NUBP2_DROGR Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
grimshawi GN=GH14587 PE=3 SV=1
Length = 264
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + LA+AL + KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGH-KVGLLDIDLCGPSVPYLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VPI E+ + MS+GFL+ + + PV+WRGP +++ +V W LD
Sbjct: 61 IFQCDDGWVPIYTDESKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIKQFLSDVKWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQ 163
L+ID PPGT D +T + L+
Sbjct: 121 LIIDTPPGTSDEHITVMECLR 141
>sp|Q9R061|NUBP2_MOUSE Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus
GN=Nubp2 PE=1 SV=1
Length = 275
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
+ GV+ +I V SGKGGVGKST + LA+AL + + KVG+LD D+ GPS+P M++ K
Sbjct: 13 NLAGVRHIILVLSGKGGVGKSTISTELALALRHQGK-KVGILDVDLCGPSIPHMLRAQGK 71
Query: 86 PEVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLD 141
D VP+ + + MS+GFL+ + VVWRGP + +++ +V WG LD
Sbjct: 72 AVHQCDNGWVPVFVDQEQSISLMSVGFLLENPDEAVVWRGPKKHALIKQFVSDVAWGQLD 131
Query: 142 ILVIDMPPGTGDAQLTTTQTLQ 163
LV+D PPGT D + T + L+
Sbjct: 132 YLVVDTPPGTSDEHMATMEALR 153
>sp|B4IUH5|NBP21_DROYA Cytosolic Fe-S cluster assembly factor NUBP2 homolog 1
OS=Drosophila yakuba GN=GE23241 PE=3 SV=1
Length = 260
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK++I V SGKGGVGKST + L++AL K KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLAL-RKNGFKVGLLDIDLCGPSVPYLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VP+ E+ + MS+GFL+ + PV+WRGP +R+ +V W LD
Sbjct: 61 IFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQLSGIR 168
L+ID PPGT D +T + L+ G
Sbjct: 121 LIIDTPPGTSDEHITVMECLKEVGCH 146
>sp|B4PES4|NBP22_DROYA Cytosolic Fe-S cluster assembly factor NUBP2 homolog 2
OS=Drosophila yakuba GN=GE19695 PE=3 SV=1
Length = 260
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK++I V SGKGGVGKST + L++AL K KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLAL-RKNGFKVGLLDIDLCGPSVPYLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VP+ E+ + MS+GFL+ + PV+WRGP +R+ +V W LD
Sbjct: 61 IFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQLSGIR 168
L+ID PPGT D +T + L+ G
Sbjct: 121 LIIDTPPGTSDEHITVMECLKEVGCH 146
>sp|B3NIP2|NUBP2_DROER Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
erecta GN=GG16127 PE=3 SV=1
Length = 260
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
++ VK++I V SGKGGVGKST + L++AL K KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLAL-RKNGFKVGLLDIDLCGPSVPYLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VP+ E+ + MS+GFL+ + PV+WRGP +R+ +V W LD
Sbjct: 61 IFQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQLSGIR 168
L+ID PPGT D +T + L+ G
Sbjct: 121 LIIDTPPGTSDEHITVMECLKEVGCH 146
>sp|Q5EB25|NUBP1_XENTR Cytosolic Fe-S cluster assembly factor nubp1 OS=Xenopus tropicalis
GN=nubp1 PE=2 SV=1
Length = 320
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
K+ VK I V SGKGGVGKST + +LA LA +V LLD D+ GPS+P MM ++ +
Sbjct: 53 KLSSVKHKILVLSGKGGVGKSTFSAHLAHGLAQDESKEVALLDVDICGPSIPKMMGLEGE 112
Query: 86 PEVTKDMKMVPI---ENYGVKCMSMGFLVPSSSP---VVWRGPMVMSALRKMSREVDWGN 139
P+ +N V MS+GFL+ SSP V+WRGP +++ R+VDWG
Sbjct: 113 QVHQSGSGWSPVYVEDNLAV--MSVGFLL--SSPDDAVIWRGPKKNGMIKQFLRDVDWGE 168
Query: 140 LDILVIDMPPGTGDAQLTTTQTLQLSGI 167
+D L+ID PPGT D L+ Q L ++GI
Sbjct: 169 VDYLIIDTPPGTSDEHLSVVQYLSVAGI 196
>sp|Q68FS1|NUBP2_RAT Cytosolic Fe-S cluster assembly factor NUBP2 OS=Rattus norvegicus
GN=Nubp2 PE=1 SV=1
Length = 271
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
+ GV+ +I V SGKGGVGKST + LA+AL + + KVG+LD D+ GPS+P M+ K
Sbjct: 9 NLAGVRHIILVLSGKGGVGKSTISTELALALRHQGK-KVGILDVDLCGPSIPHMLHAQGK 67
Query: 86 PEVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLD 141
D VP+ + + MS+GFL+ + VVWRGP + +++ +V WG LD
Sbjct: 68 AVHQCDSGWVPVFVDQEQSISLMSVGFLLENPDEAVVWRGPKKHALIKQFVSDVAWGELD 127
Query: 142 ILVIDMPPGTGDAQLTTTQTLQ 163
LV+D PPGT D + T + L+
Sbjct: 128 YLVVDTPPGTSDEHMATVEALR 149
>sp|Q9UT57|CFD1_SCHPO Probable cytosolic Fe-S cluster assembly factor C806.02c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC806.02c PE=3 SV=1
Length = 608
Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 10/146 (6%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALA-SKC---QLKVGLLDADVYGPSVPMMMKI 82
+D V+ VI V SGKGGVGKS+ LA++L SK LK G+LD D+ GPS+P M
Sbjct: 1 MDKVQHVILVLSGKGGVGKSSVTTQLALSLHDSKVYSRPLKTGILDIDLTGPSIPRMFGK 60
Query: 83 DQKPEVTKDMKM--VPI---ENYGVKCMSMGFLVPSSS-PVVWRGPMVMSALRKMSREVD 136
D + VP+ E + MS+GFL+ S + VVWRGP + +R+ +V
Sbjct: 61 DAERNRIHQSSAGWVPVYTDETKEIGLMSLGFLLTSKNDSVVWRGPKKAAMIRQFISDVS 120
Query: 137 WGNLDILVIDMPPGTGDAQLTTTQTL 162
WG LD L+ID PPGTGD LT ++L
Sbjct: 121 WGELDFLIIDTPPGTGDEHLTIVESL 146
>sp|B4KY56|NUBP2_DROMO Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
mojavensis GN=GI13405 PE=3 SV=1
Length = 264
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + LA+AL + KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGH-KVGLLDIDLCGPSVPHLLGLEGRD 60
Query: 87 EVTKDMKMVPI---ENYGVKCMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VPI E+ + MS+GFL+ + + PV+WRGP +++ +V W +LD
Sbjct: 61 IYQCDDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIKQFLTDVKWEDLDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQ 163
L+ID PPGT D +T + ++
Sbjct: 121 LIIDTPPGTSDEHITVMECMR 141
>sp|A9V7A1|NUBP2_MONBE Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Monosiga
brevicollis GN=33756 PE=3 SV=1
Length = 284
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 84/142 (59%), Gaps = 4/142 (2%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
++ GVK ++ V SGKGGVGKST A +A+ L + LKVGLLD D+ GPS+P M + +
Sbjct: 14 RLAGVKHIVLVLSGKGGVGKSTVASQMAIGLIHR-GLKVGLLDIDLTGPSIPTMFGVADQ 72
Query: 86 PEVTKDMKMVPIENYGVKC--MSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
T VP+ Y + MS+GFL+ S V+WRGP + +++ EV W LD
Sbjct: 73 QVHTSSEGWVPLYKYDQRLAIMSIGFLLDSRDEAVIWRGPKKNAMIQQFLSEVCWDELDC 132
Query: 143 LVIDMPPGTGDAQLTTTQTLQL 164
LV+D PPGT D L+ L+L
Sbjct: 133 LVVDTPPGTSDEHLSIVDALKL 154
>sp|Q7QGS3|NUBP2_ANOGA Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Anopheles
gambiae GN=AGAP010873 PE=3 SV=4
Length = 259
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK +I V SGKGGVGKST + LA+ LA + KVGLLD D+ GPSVP ++ ++ +
Sbjct: 2 LDKVKHIILVLSGKGGVGKSTVSTQLALTLA-EADHKVGLLDIDLCGPSVPYLLGLEDRD 60
Query: 87 EVTKDMKMVPIENYGVK---CMSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VP+ K MS+GFL+ + S V+WRGP + +++ +V+W LD
Sbjct: 61 VHQCDEGWVPVYTSAEKRLAVMSIGFLLKNRSDAVIWRGPKKTAMIKQFLEDVNWDELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQ 163
L+ID PPGT D +T + L+
Sbjct: 121 LIIDTPPGTSDEHITVMECLK 141
>sp|Q6C7A6|NBP35_YARLI Cytosolic Fe-S cluster assembly factor NBP35 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=NBP35 PE=3 SV=1
Length = 340
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
++ GVK I V SGKGGVGKST + L AS +VGL+D D+ GPS+P MM + +
Sbjct: 69 RMKGVKHKILVLSGKGGVGKSTFSSLLGWGFASDLDREVGLMDIDICGPSLPKMMGSEGE 128
Query: 86 PEVTKDMKMVPI---ENYGVKCMSMGFLVPSSS-PVVWRGPMVMSALRKMSREVDWGNLD 141
T PI +N G+ MS+GF++P+ ++WRG +++ ++VDWGNLD
Sbjct: 129 QIHTSLSGWSPIYVSDNLGM--MSVGFMLPNQDDAIIWRGAKKNGLIKQFLKDVDWGNLD 186
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLSGI 167
LV+D PPGT D L+ TQ L+ SG+
Sbjct: 187 YLVVDTPPGTSDEHLSVTQYLKESGV 212
>sp|Q6P298|NUBP1_DANRE Cytosolic Fe-S cluster assembly factor nubp1 OS=Danio rerio
GN=nubp1 PE=2 SV=2
Length = 321
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
K+ VK I V SGKGGVGKST + +L+ ALAS +V LLD D+ GPS+P +M ++ +
Sbjct: 53 KMTSVKHKILVLSGKGGVGKSTFSAHLSHALASDSSKEVALLDVDICGPSIPKIMGLEGE 112
Query: 86 PEVTKDMKMVPI---ENYGVKCMSMGFLVPSSSP---VVWRGPMVMSALRKMSREVDWGN 139
P+ +N V MS+GFL+ SSP V+WRGP +++ R+VDWG
Sbjct: 113 QVHQSGSGWSPVYVEDNLAV--MSIGFLL--SSPDDAVIWRGPKKNGMIKQFLRDVDWGE 168
Query: 140 LDILVIDMPPGTGDAQLTTTQTLQLSGI 167
+D L++D PPGT D L+ Q L +GI
Sbjct: 169 VDYLIVDTPPGTSDEHLSIVQYLSGAGI 196
>sp|Q29DB7|NUBP2_DROPS Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA18483 PE=3 SV=2
Length = 258
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + LA+AL KVGLLD D+ GPSVP ++ ++
Sbjct: 2 LDKVKNVIIVLSGKGGVGKSTVSTQLALALRHSGH-KVGLLDIDLCGPSVPFLLGLEGSN 60
Query: 87 EVTKDMKMVPIENYGVKC---MSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VPI K MS+GFL+ + + PV+WRGP +R+ +V W LD
Sbjct: 61 IYQCDEGWVPIYTDASKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWEELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQ 163
L+ID PPGT D +T + ++
Sbjct: 121 LIIDTPPGTSDEHITVMECMR 141
>sp|B4H7P4|NUBP2_DROPE Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
persimilis GN=GL12799 PE=3 SV=1
Length = 255
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 27 IDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQKP 86
+D VK+VI V SGKGGVGKST + LA+AL KVGLLD D+ GPSVP ++ ++
Sbjct: 2 LDKVKNVIIVLSGKGGVGKSTVSTQLALALRHSGH-KVGLLDIDLCGPSVPFLLGLEGSN 60
Query: 87 EVTKDMKMVPIENYGVKC---MSMGFLVPS-SSPVVWRGPMVMSALRKMSREVDWGNLDI 142
D VPI K MS+GFL+ + + PV+WRGP +R+ +V W LD
Sbjct: 61 IYQCDEGWVPIYTDASKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWEELDY 120
Query: 143 LVIDMPPGTGDAQLTTTQTLQ 163
L+ID PPGT D +T + ++
Sbjct: 121 LIIDTPPGTSDEHITVMECMR 141
>sp|O94442|NBP35_SCHPO Cytosolic Fe-S cluster assembly factor nbp35 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=nbp35 PE=3 SV=1
Length = 317
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 26 KIDGVKDVIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPSVPMMMKIDQK 85
++ +K I V SGKGGVGKST + LA L+ + ++GL+D D+ GPS+P +M ++++
Sbjct: 55 RLKEIKHKILVLSGKGGVGKSTFSSQLAWGLSLEEDKQIGLMDVDICGPSIPRIMGVEKE 114
Query: 86 PEVTKDMKMVPI---ENYGVKCMSMGFLVPSS-SPVVWRGPMVMSALRKMSREVDWGNLD 141
PI N V MS+GFL+PS S V+WRGP +++ ++V+W NLD
Sbjct: 115 EAHQSSKGWSPIYVCPNLAV--MSIGFLLPSEDSSVIWRGPKKNGLIKQFIKDVNWENLD 172
Query: 142 ILVIDMPPGTGDAQLTTTQTLQLSGI 167
L++D PPGT D L+ Q + SGI
Sbjct: 173 YLIVDTPPGTSDEHLSLVQFFKNSGI 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,153,601
Number of Sequences: 539616
Number of extensions: 2503710
Number of successful extensions: 7661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 7014
Number of HSP's gapped (non-prelim): 506
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)