Query 030974
Match_columns 168
No_of_seqs 35 out of 37
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 11:27:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030974.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030974hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x4ta1 a.2.15.1 (A:7-86) Pre- 48.6 6.7 0.00049 26.5 3.1 21 140-160 19-39 (80)
2 d1tjla1 a.2.14.1 (A:7-110) Dna 34.6 18 0.0013 24.5 3.6 24 138-161 35-58 (104)
3 d1v5va1 b.44.2.1 (A:313-401) G 32.7 7.6 0.00056 24.7 1.2 12 106-117 73-84 (89)
4 d2qv7a1 e.52.1.2 (A:1-312) Dia 24.5 2.9 0.00021 30.6 -2.3 15 114-128 60-74 (312)
5 d1jaka1 c.1.8.6 (A:151-506) be 23.1 30 0.0022 26.2 3.4 27 58-84 17-43 (356)
6 d1ag9a_ c.23.5.1 (A:) Flavodox 22.4 31 0.0023 23.9 3.1 22 131-152 146-167 (175)
7 d1ikpa2 d.166.1.1 (A:395-606) 21.9 16 0.0012 28.2 1.5 17 115-131 5-27 (212)
8 d1u94a2 d.48.1.1 (A:269-328) R 21.8 25 0.0018 21.9 2.2 34 124-157 19-56 (60)
9 d2bona1 e.52.1.2 (A:5-299) Lip 20.8 3.7 0.00027 29.8 -2.3 14 115-128 56-69 (295)
10 d1yt8a3 c.46.1.2 (A:373-529) T 18.3 15 0.0011 24.6 0.6 33 122-154 115-148 (157)
No 1
>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.57 E-value=6.7 Score=26.53 Aligned_cols=21 Identities=48% Similarity=0.865 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhH
Q 030974 140 RAELWREELIEEIEQKVGGLQ 160 (168)
Q Consensus 140 R~elwrEeLieEIEqkvgglr 160 (168)
-+|-||-++|+||=+||..++
T Consensus 19 ~aekwR~~iikEI~~kvs~Iq 39 (80)
T d1x4ta1 19 KAEKWRRQIIGEISKKVAQIQ 39 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 367899999999999998765
No 2
>d1tjla1 a.2.14.1 (A:7-110) DnaK suppressor protein DksA, alpha-hairpin domain {Escherichia coli [TaxId: 562]}
Probab=34.64 E-value=18 Score=24.46 Aligned_cols=24 Identities=29% Similarity=0.605 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHH
Q 030974 138 AARAELWREELIEEIEQKVGGLQE 161 (168)
Q Consensus 138 ~aR~elwrEeLieEIEqkvgglre 161 (168)
..+=.-|+++|++|+++-+..+++
T Consensus 35 r~~L~~~k~eL~~e~~~t~~~~~~ 58 (104)
T d1tjla1 35 RRILEAWRNQLRDEVDRTVTHMQD 58 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc
Confidence 456677999999999999888874
No 3
>d1v5va1 b.44.2.1 (A:313-401) Glycine cleavage system T protein, GcvT {Pyrococcus horikoshii [TaxId: 53953]}
Probab=32.70 E-value=7.6 Score=24.72 Aligned_cols=12 Identities=33% Similarity=0.886 Sum_probs=9.7
Q ss_pred cCCCCCCCCCcc
Q 030974 106 TKDPYYDSDAYR 117 (168)
Q Consensus 106 tKngFYDSD~Yr 117 (168)
.+.||||.+.|+
T Consensus 73 ~~~PfyDp~~~~ 84 (89)
T d1v5va1 73 VTPPFYDPKKYG 84 (89)
T ss_dssp ECSCSSCTTTSS
T ss_pred ECCCCcCCcccE
Confidence 357999999886
No 4
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=24.50 E-value=2.9 Score=30.55 Aligned_cols=15 Identities=40% Similarity=0.483 Sum_probs=11.1
Q ss_pred CCcccCCCCCcccee
Q 030974 114 DAYREDGGDGTGHWF 128 (168)
Q Consensus 114 D~YrGnGGdgtghW~ 128 (168)
|.-=--|||||.|++
T Consensus 60 d~ivv~GGDGTv~~v 74 (312)
T d2qv7a1 60 DVLIAAGGDGTLNEV 74 (312)
T ss_dssp SEEEEEECHHHHHHH
T ss_pred CEEEEEcCCcHHHHH
Confidence 344567999998875
No 5
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]}
Probab=23.10 E-value=30 Score=26.22 Aligned_cols=27 Identities=19% Similarity=0.121 Sum_probs=20.2
Q ss_pred HHHHHHhhhcccceeeecceeeccHHH
Q 030974 58 IAILVEHAEGQRDLITEKSIWHLSDQA 84 (168)
Q Consensus 58 ma~~ve~~e~~rd~i~~ksiwhlsd~a 84 (168)
|..+-+.|+.+--.=-+.=-|||+|++
T Consensus 17 ~~~i~~~id~ma~~K~N~lh~Hl~D~~ 43 (356)
T d1jaka1 17 VDEVKRYIDRVARYKYNKLHLHLSDDQ 43 (356)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECBCSS
T ss_pred HHHHHHHHHHHHHcCCeEEEEEEecCC
Confidence 566777777776666677789999974
No 6
>d1ag9a_ c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 562]}
Probab=22.41 E-value=31 Score=23.90 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=17.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 030974 131 KQEEIEEAARAELWREELIEEI 152 (168)
Q Consensus 131 ~qe~~E~~aR~elwrEeLieEI 152 (168)
.++..+.+.|-+-|-++|.+|+
T Consensus 146 dn~~~~t~~ri~~W~~~l~~e~ 167 (175)
T d1ag9a_ 146 DRQPELTAERVEKWVKQISEEL 167 (175)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHh
Confidence 3445556679999999999998
No 7
>d1ikpa2 d.166.1.1 (A:395-606) Exotoxin A, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.88 E-value=16 Score=28.18 Aligned_cols=17 Identities=47% Similarity=1.003 Sum_probs=14.1
Q ss_pred CcccCCCC------Cccceeeec
Q 030974 115 AYREDGGD------GTGHWFYEK 131 (168)
Q Consensus 115 ~YrGnGGd------gtghW~Y~~ 131 (168)
.|-||||| ||-+|.|+.
T Consensus 5 eflgdggdvsfs~~G~~NWT~~~ 27 (212)
T d1ikpa2 5 EFLGDGGDVSFSTRGTQNWTVER 27 (212)
T ss_dssp GSCCSSSCCCCCTTCCTTCCHHH
T ss_pred hhccCCCcceecccccchhhHHH
Confidence 57789997 899999964
No 8
>d1u94a2 d.48.1.1 (A:269-328) RecA protein, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.83 E-value=25 Score=21.87 Aligned_cols=34 Identities=41% Similarity=0.530 Sum_probs=21.8
Q ss_pred ccceeeechHHH---HHHHHHHHHH-HHHHHHHHHhhh
Q 030974 124 TGHWFYEKQEEI---EEAARAELWR-EELIEEIEQKVG 157 (168)
Q Consensus 124 tghW~Y~~qe~~---E~~aR~elwr-EeLieEIEqkvg 157 (168)
.|.|++=..|.+ .+.||.-|-. .+|.+|||++|-
T Consensus 19 sGsWysy~~eklGQGre~~~~~L~enpel~~eie~~ir 56 (60)
T d1u94a2 19 AGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVR 56 (60)
T ss_dssp CTTCEEETTEEEESSHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ccceEEeCCccccchHHHHHHHHHHCHHHHHHHHHHHH
Confidence 466766544444 4566665532 489999999874
No 9
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=20.83 E-value=3.7 Score=29.80 Aligned_cols=14 Identities=36% Similarity=0.399 Sum_probs=10.3
Q ss_pred CcccCCCCCcccee
Q 030974 115 AYREDGGDGTGHWF 128 (168)
Q Consensus 115 ~YrGnGGdgtghW~ 128 (168)
.-=-.|||||.|++
T Consensus 56 ~Ivv~GGDGTv~ev 69 (295)
T d2bona1 56 TVIAGGGDGTINEV 69 (295)
T ss_dssp EEEEEESHHHHHHH
T ss_pred EEEEECCCcHHHHH
Confidence 34456999998865
No 10
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=18.30 E-value=15 Score=24.58 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=25.6
Q ss_pred CCccceeeechHHHHHHHHHHH-HHHHHHHHHHH
Q 030974 122 DGTGHWFYEKQEEIEEAARAEL-WREELIEEIEQ 154 (168)
Q Consensus 122 dgtghW~Y~~qe~~E~~aR~el-wrEeLieEIEq 154 (168)
+..-++.|++++.-.+++|+.| |-..|++.|+.
T Consensus 115 ~d~~~~~~~~~~~~~~~~r~yl~WE~~l~~~~~~ 148 (157)
T d1yt8a3 115 IDRYRRPYEGTDNPREAMQGYLDWEFGLVEQLGR 148 (157)
T ss_dssp CSSCCCTTSSSCSCHHHHHHHHHHHHTHHHHHHH
T ss_pred ccceecccccCcchHHHHHHHHHHHHHHHHHhhc
Confidence 3445667788877778899998 99999998875
Done!