Query 030982
Match_columns 168
No_of_seqs 107 out of 226
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 07:29:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030982.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030982hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05620 DUF788: Protein of un 100.0 1.4E-60 3.1E-65 376.1 19.9 164 1-164 1-170 (170)
2 KOG3269 Predicted membrane pro 100.0 8.7E-48 1.9E-52 300.7 17.5 166 1-166 1-173 (180)
3 KOG3269 Predicted membrane pro 97.9 0.001 2.2E-08 52.9 15.2 157 2-165 10-175 (180)
4 PF05620 DUF788: Protein of un 93.5 2.9 6.4E-05 32.8 14.4 23 44-66 47-69 (170)
5 PF11808 DUF3329: Domain of un 91.3 1.3 2.8E-05 31.2 7.0 43 98-140 12-57 (90)
6 COG1755 Uncharacterized protei 79.3 19 0.00041 28.6 8.4 115 4-129 32-154 (172)
7 PF14949 ARF7EP_C: ARF7 effect 63.8 3.4 7.5E-05 30.2 0.9 21 66-86 42-62 (103)
8 PF06936 Selenoprotein_S: Sele 63.2 0.62 1.3E-05 37.6 -3.4 33 102-136 23-56 (190)
9 PF10990 DUF2809: Protein of u 55.0 59 0.0013 23.0 6.1 50 16-65 9-58 (91)
10 PF15086 UPF0542: Uncharacteri 51.1 28 0.00062 23.9 3.7 13 121-133 35-47 (74)
11 PF15012 DUF4519: Domain of un 48.4 18 0.00039 23.6 2.3 36 4-39 14-49 (56)
12 PF14038 YqzE: YqzE-like prote 47.7 15 0.00032 23.9 1.8 13 153-165 24-36 (54)
13 PF13210 DUF4018: Domain of un 43.9 62 0.0013 25.9 5.1 22 10-31 91-112 (192)
14 PF04191 PEMT: Phospholipid me 41.7 1.2E+02 0.0025 21.0 7.9 45 84-128 40-86 (106)
15 PF14147 Spore_YhaL: Sporulati 40.1 55 0.0012 21.1 3.5 18 116-133 3-22 (52)
16 cd04857 Peptidases_S8_Tripepti 39.8 24 0.00053 31.7 2.5 28 62-91 11-41 (412)
17 PF03563 Bunya_G2: Bunyavirus 39.1 89 0.0019 26.8 5.6 37 97-133 188-228 (285)
18 PF04890 DUF648: Family of unk 38.1 51 0.0011 28.9 4.1 29 12-40 57-85 (328)
19 PRK10697 DNA-binding transcrip 34.7 1.3E+02 0.0028 22.5 5.4 43 89-138 23-66 (118)
20 PF06697 DUF1191: Protein of u 33.3 29 0.00064 29.7 1.9 16 150-165 240-255 (278)
21 PF05101 VirB3: Type IV secret 32.0 1.3E+02 0.0028 20.4 4.8 27 106-132 35-61 (89)
22 PF14293 YWFCY: YWFCY protein 31.9 1.3E+02 0.0029 19.9 4.4 21 11-31 3-27 (61)
23 PF06281 DUF1035: Protein of u 31.9 21 0.00046 24.2 0.7 15 118-132 57-71 (73)
24 PF05814 DUF843: Baculovirus p 30.4 1.5E+02 0.0033 20.8 4.8 10 152-161 63-72 (83)
25 TIGR00783 ccs citrate carrier 29.6 4E+02 0.0086 23.6 8.9 28 56-83 131-160 (347)
26 TIGR00934 2a38euk potassium up 28.2 5.7E+02 0.012 25.3 9.7 20 81-100 505-524 (800)
27 PF05297 Herpes_LMP1: Herpesvi 27.2 21 0.00045 31.1 0.0 9 33-41 67-75 (381)
28 PHA02513 V1 structural protein 27.2 78 0.0017 23.7 3.0 15 118-132 120-134 (135)
29 PF08250 Sperm_act_pep: Sperm- 25.6 36 0.00077 14.7 0.6 9 83-91 1-9 (10)
30 PRK13899 type IV secretion sys 25.2 2.4E+02 0.0052 20.1 5.3 26 101-126 31-57 (97)
31 PRK12772 bifunctional flagella 24.7 1.8E+02 0.0039 27.5 5.7 15 149-163 268-282 (609)
32 KOG1114 Tripeptidyl peptidase 24.6 55 0.0012 33.0 2.3 40 61-102 68-116 (1304)
33 PF06772 LtrA: Bacterial low t 24.0 3E+02 0.0065 23.5 6.6 49 90-138 5-60 (354)
34 KOG4055 Uncharacterized conser 23.1 39 0.00085 27.4 0.9 17 147-163 123-139 (213)
No 1
>PF05620 DUF788: Protein of unknown function (DUF788); InterPro: IPR008506 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=1.4e-60 Score=376.12 Aligned_cols=164 Identities=38% Similarity=0.727 Sum_probs=152.9
Q ss_pred CCchhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHhhcCcccCCCCCcc
Q 030982 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAKPTYTDDGELI 80 (168)
Q Consensus 1 MA~~s~Kk~a~~N~~~l~~l~~~~~~~n~l~~l~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~l~~~~rP~y~~~G~Lv 80 (168)
|||+|+||++++|++++++++++++++|++|+++|+++++++.++++++.|+++++|+++||++|++++||+||++|+|+
T Consensus 1 MA~ks~Kk~a~~N~~~l~~l~~~~~~~~~l~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~rp~~~~~g~Lv 80 (170)
T PF05620_consen 1 MANKSAKKIAEENKATLKFLRLISLAVNILYLLLRLLFRYSSPSFWSWFGYLLFSLPAIFCYYFLEKMARPKYDETGELV 80 (170)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCchHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCee
Confidence 99999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred cccccCCCCc-chhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh---hccCCCCCCCC-Cc-chHhHHH
Q 030982 81 DGGFDMSTGG-ICGYLHDVIYITSFVQVMSILSEKFWYTYLVIPAFGAYQSFGFI---KGFLPQGSEGD-TE-DEKTRKK 154 (168)
Q Consensus 81 ~~G~DL~~~G-l~ey~~Diiylt~~v~~~~~~s~~~W~l~LvIP~y~~Ykl~~~~---~p~~~~~~~~~-~~-~~~~sKr 154 (168)
|+|+|||++| ++||+||+||+||+||+++++|+||||+||+||+|++||+|+++ .||+..+++++ ++ ++++|||
T Consensus 81 ~~G~DL~~~G~l~ey~~Diiylt~~vq~l~~~s~~~w~l~LvIP~ya~Ykl~~~i~~~~~~~~~~~~~~~~~~~~~~sKr 160 (170)
T PF05620_consen 81 DAGEDLNQPGGLTEYMFDIIYLTWFVQVLSIISNKFWWLYLVIPGYAIYKLWGLIKKLGPWFSQPPPQQAEPEEEAKSKR 160 (170)
T ss_pred cCcccccCCcchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccccccccccccHH
Confidence 9999999866 99999999999999999999999999999999999999999987 46775444443 22 2789999
Q ss_pred HHHHHHhhcc
Q 030982 155 REKMEKKTSR 164 (168)
Q Consensus 155 q~K~Ekr~~k 164 (168)
|+|+|||++|
T Consensus 161 q~K~err~~K 170 (170)
T PF05620_consen 161 QEKMERRANK 170 (170)
T ss_pred HHHHHHhccC
Confidence 9999999987
No 2
>KOG3269 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=8.7e-48 Score=300.71 Aligned_cols=166 Identities=46% Similarity=0.867 Sum_probs=150.6
Q ss_pred CCchhHhhHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHhhcCcccC
Q 030982 1 MANQGAKKRKEENARHMEKLRRLIIACNV------IYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAKPTYT 74 (168)
Q Consensus 1 MA~~s~Kk~a~~N~~~l~~l~~~~~~~n~------l~~l~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~l~~~~rP~y~ 74 (168)
|||+++||++.+|++.+-.+...++.++. ++++++.+|++++.|+++|+++++++++++++|++|..|++|+||
T Consensus 1 MA~q~~~Kqat~naK~I~een~~t~~fy~~~~~~~~~~~v~~~f~~s~~T~~~wi~lv~s~l~~g~~y~~m~~mAkpkyd 80 (180)
T KOG3269|consen 1 MANQAKKKQATKNAKHIAEENKITLLFYLNMGANAVYFAVLRLFFYSSVTKTSWIGLVFSSLVYGFAYYFMHSMAKPKYD 80 (180)
T ss_pred CCCcccchhcccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhccCCcC
Confidence 88888888888886666666666655555 778888888888899999999999999999999999999999999
Q ss_pred CCCCcccccccCCCCc-chhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCcchHhHH
Q 030982 75 DDGELIDGGFDMSTGG-ICGYLHDVIYITSFVQVMSILSEKFWYTYLVIPAFGAYQSFGFIKGFLPQGSEGDTEDEKTRK 153 (168)
Q Consensus 75 ~~G~Lv~~G~DL~~~G-l~ey~~Diiylt~~v~~~~~~s~~~W~l~LvIP~y~~Ykl~~~~~p~~~~~~~~~~~~~~~sK 153 (168)
++|+|+|+|.|||++| ++||++|+||+||++|++++++.+||+.||++|+|++||+++++.||+...+++..+||+.+|
T Consensus 81 d~G~Lld~G~Dln~~g~~~sy~~D~iylt~~v~llsiis~kfw~~lLl~P~~a~yk~~g~i~p~ls~g~~~~dn~e~~~k 160 (180)
T KOG3269|consen 81 DDGALLDGGFDLNDEGAICSYVKDAIYLTCFVQLLSIISGKFWASLLLIPIFAGYKAAGLILPMLSQGSEQGDNDEKNRK 160 (180)
T ss_pred CCCceeecCcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhcchhccccccccchhhcch
Confidence 9999999999999877 999999999999999999999999999999999999999999999999877777777889999
Q ss_pred HHHHHHHhhccCC
Q 030982 154 KREKMEKKTSRGS 166 (168)
Q Consensus 154 rq~K~Ekr~~k~~ 166 (168)
+|+|||||++|++
T Consensus 161 kq~K~~R~~~r~~ 173 (180)
T KOG3269|consen 161 KQKKMDRQMSRGQ 173 (180)
T ss_pred hHHHHHHHHHccc
Confidence 9999999999865
No 3
>KOG3269 consensus Predicted membrane protein [Function unknown]
Probab=97.93 E-value=0.001 Score=52.92 Aligned_cols=157 Identities=13% Similarity=-0.010 Sum_probs=80.0
Q ss_pred CchhHhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHhhcCc----ccCCC
Q 030982 2 ANQGAKKRKEENARHMEKLRRLII-ACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAKP----TYTDD 76 (168)
Q Consensus 2 A~~s~Kk~a~~N~~~l~~l~~~~~-~~n~l~~l~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~l~~~~rP----~y~~~ 76 (168)
|++.+|.++++|.+++.++.++.+ ++-.....+-+...-+..+|.-+..-.+.....+-.+..|.+-.=- ..|.-
T Consensus 10 at~naK~I~een~~t~~fy~~~~~~~~~~~v~~~f~~s~~T~~~wi~lv~s~l~~g~~y~~m~~mAkpkydd~G~Lld~G 89 (180)
T KOG3269|consen 10 ATKNAKHIAEENKITLLFYLNMGANAVYFAVLRLFFYSSVTKTSWIGLVFSSLVYGFAYYFMHSMAKPKYDDDGALLDGG 89 (180)
T ss_pred cccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCceeecC
Confidence 678999999999999999983322 2222223333444444457777765555555444445667654332 23322
Q ss_pred CCccccc---ccCCCCcchhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHhhhhccCCCCCCCCCcchHhH
Q 030982 77 GELIDGG---FDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTYLVIPAFGAYQ-SFGFIKGFLPQGSEGDTEDEKTR 152 (168)
Q Consensus 77 G~Lv~~G---~DL~~~Gl~ey~~Diiylt~~v~~~~~~s~~~W~l~LvIP~y~~Yk-l~~~~~p~~~~~~~~~~~~~~~s 152 (168)
-.|-++| +|+ .-+.=...|++.++.+.+ -+.++.++.-+--+|-++- +-.++..--.+.+++ +.++++.
T Consensus 90 ~Dln~~g~~~sy~--~D~iylt~~v~llsiis~----kfw~~lLl~P~~a~yk~~g~i~p~ls~g~~~~dn~-e~~~kkq 162 (180)
T KOG3269|consen 90 FDLNDEGAICSYV--KDAIYLTCFVQLLSIISG----KFWASLLLIPIFAGYKAAGLILPMLSQGSEQGDND-EKNRKKQ 162 (180)
T ss_pred cCCCCCccHHHHH--HHHHHHHHHHHHHHHHHH----HHHHHHHHhhHHHHHHHHHhhcchhccccccccch-hhcchhH
Confidence 2566666 333 224455667777777653 1112222222222222222 223333333333333 3455556
Q ss_pred HHHHHHHHhhccC
Q 030982 153 KKREKMEKKTSRG 165 (168)
Q Consensus 153 Krq~K~Ekr~~k~ 165 (168)
||++++.+|++++
T Consensus 163 ~K~~R~~~r~~~~ 175 (180)
T KOG3269|consen 163 KKMDRQMSRGQVV 175 (180)
T ss_pred HHHHHHHHccccc
Confidence 6666666666554
No 4
>PF05620 DUF788: Protein of unknown function (DUF788); InterPro: IPR008506 This family consists of several eukaryotic proteins of unknown function.
Probab=93.53 E-value=2.9 Score=32.78 Aligned_cols=23 Identities=9% Similarity=0.283 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 030982 44 TWKHWVGLVLTSVAYAIPYQQLS 66 (168)
Q Consensus 44 ~~~~~~~~~l~~~~~~~~~~~l~ 66 (168)
++..++.+.++.+.+......+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~l~~~~ 69 (170)
T PF05620_consen 47 SWFGYLLFSLPAIFCYYFLEKMA 69 (170)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 33344444444443333344443
No 5
>PF11808 DUF3329: Domain of unknown function (DUF3329); InterPro: IPR021766 This family of proteins are functionally uncharacterised. This family is only found in bacteria. ; GO: 0004673 protein histidine kinase activity
Probab=91.33 E-value=1.3 Score=31.24 Aligned_cols=43 Identities=9% Similarity=0.276 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHhh--hhccCCC
Q 030982 98 VIYITSFVQVMSILSEKFW-YTYLVIPAFGAYQSFGF--IKGFLPQ 140 (168)
Q Consensus 98 iiylt~~v~~~~~~s~~~W-~l~LvIP~y~~Ykl~~~--~~p~~~~ 140 (168)
++.+..++-++..+.+..| .+.+..-+|.+|.++.. +.-|+..
T Consensus 12 l~~~~l~~~lvG~~~g~~~~~l~~~l~~~l~wh~~~l~rL~~WL~~ 57 (90)
T PF11808_consen 12 LLLLLLAAALVGWLFGHLWWALLLGLLLYLFWHLYQLYRLERWLRN 57 (90)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4444444444444445444 44455667777777776 6668743
No 6
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.33 E-value=19 Score=28.64 Aligned_cols=115 Identities=17% Similarity=0.318 Sum_probs=64.2
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHhhcCccc-----CCCCC
Q 030982 4 QGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAKPTY-----TDDGE 78 (168)
Q Consensus 4 ~s~Kk~a~~N~~~l~~l~~~~~~~n~l~~l~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~l~~~~rP~y-----~~~G~ 78 (168)
||+|.--++|...+-.+|.......+ +-......++.|..++++++.-.....-|..+...|+==- -++++
T Consensus 32 ~Ga~E~G~~n~~~l~ilH~~~yls~i----vE~~~~~~~f~~~~~~gl~~~l~s~~ll~~vi~~LG~iWttki~ilP~h~ 107 (172)
T COG1755 32 KGAKEYGKTNYKLLVILHTAFYLSCI----VEAWLNNTFFNWLSIIGLALLLFSQILLYWVIKSLGEIWTTKIMILPNHQ 107 (172)
T ss_pred CcchhhCccccchHHHHHHHHHHHHH----HHHHHhCCccccccHHHHHHHHHHHHHHHHHHHHHhhhheeeEEEeCCce
Confidence 45666666777777777776655432 2233344455555666666666666666777777664211 14566
Q ss_pred cccccccCCCCcchhHHHHHHHHH-HHHHHHH-HhhhHHHHH-HHHHHHHHHHH
Q 030982 79 LIDGGFDMSTGGICGYLHDVIYIT-SFVQVMS-ILSEKFWYT-YLVIPAFGAYQ 129 (168)
Q Consensus 79 Lv~~G~DL~~~Gl~ey~~Diiylt-~~v~~~~-~~s~~~W~l-~LvIP~y~~Yk 129 (168)
++++| +..++.-==|.- .+.++.. .....+|+. .+..|+|+.-.
T Consensus 108 ~v~sg-------lfk~~kHPNYflnIipEligl~Ll~~A~~Ta~l~~p~ya~~L 154 (172)
T COG1755 108 IVRSG-------LFKTMKHPNYFLNIIPELIGLPLLCQAWYTALLFSPIYALLL 154 (172)
T ss_pred eeccc-------cchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666 444443333333 3445333 344667774 46777776544
No 7
>PF14949 ARF7EP_C: ARF7 effector protein C-terminus
Probab=63.84 E-value=3.4 Score=30.22 Aligned_cols=21 Identities=29% Similarity=0.558 Sum_probs=17.9
Q ss_pred HhhcCcccCCCCCcccccccC
Q 030982 66 SAMAKPTYTDDGELIDGGFDM 86 (168)
Q Consensus 66 ~~~~rP~y~~~G~Lv~~G~DL 86 (168)
..-..++||++|.|+..|.||
T Consensus 42 ~~~~~~~YD~~G~l~~~~~Dl 62 (103)
T PF14949_consen 42 PKKKSKHYDEKGRLISNGKDL 62 (103)
T ss_pred cccccccccCCceEeeCCCcc
Confidence 344568999999999999998
No 8
>PF06936 Selenoprotein_S: Selenoprotein S (SelS); InterPro: IPR009703 This family consists of several mammalian selenoprotein S (SelS) sequences. SelS is a plasma membrane protein and is present in a variety of tissues and cell types. These proteins are involved in the degradation process of misfolded endoplasmic reticulum (ER) luminal proteins which participate in the transfer of misfolded proteins from the ER to the cytosol, where they are destroyed by the proteasome in a ubiquitin-dependent manner []. They probably serve as a linker between DER1, which mediates the retro-translocation of misfolded proteins into the cytosol, and the ATPase complex VCP, which mediates the translocation and ubiquitination.; GO: 0008430 selenium binding, 0006886 intracellular protein transport, 0030176 integral to endoplasmic reticulum membrane; PDB: 2Q2F_A.
Probab=63.18 E-value=0.62 Score=37.62 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=0.4
Q ss_pred HHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHhhhhc
Q 030982 102 TSFVQ-VMSILSEKFWYTYLVIPAFGAYQSFGFIKG 136 (168)
Q Consensus 102 t~~v~-~~~~~s~~~W~l~LvIP~y~~Ykl~~~~~p 136 (168)
+.+.. +..++++|.||+.+++ .++|-+|..+.+
T Consensus 23 ~~l~~tv~~~L~~yGWyil~~~--I~ly~l~qkl~~ 56 (190)
T PF06936_consen 23 SFLQSTVGSFLSSYGWYILFGC--ILLYLLWQKLSP 56 (190)
T ss_dssp -----------------------------------H
T ss_pred HHHHHHHHHHHHHhCHHHHHHH--HHHHHHHHHHHH
Confidence 44433 5568889999977543 334555555444
No 9
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=55.03 E-value=59 Score=22.96 Aligned_cols=50 Identities=8% Similarity=0.080 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHH
Q 030982 16 HMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQL 65 (168)
Q Consensus 16 ~l~~l~~~~~~~n~l~~l~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~l 65 (168)
.++.+---++.+..+|.+++.++.+.+...-....+.++.++|+..++..
T Consensus 9 ~ir~y~GDvL~~~~vy~~~~~~~p~~~~~~~~~~~l~~~~~IE~~Ql~~~ 58 (91)
T PF10990_consen 9 FIRPYLGDVLYVVLVYCLVRFFFPRKSPKRLAIAALLFAFAIEFLQLYHA 58 (91)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhH
Confidence 34444444566678899999999875545555567788888888877755
No 10
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=51.09 E-value=28 Score=23.92 Aligned_cols=13 Identities=15% Similarity=0.117 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHhh
Q 030982 121 VIPAFGAYQSFGF 133 (168)
Q Consensus 121 vIP~y~~Ykl~~~ 133 (168)
+|-++..||+-+.
T Consensus 35 iisa~lSwkLaK~ 47 (74)
T PF15086_consen 35 IISAVLSWKLAKA 47 (74)
T ss_pred HHHHHHHHHHHHH
Confidence 3445555666553
No 11
>PF15012 DUF4519: Domain of unknown function (DUF4519)
Probab=48.45 E-value=18 Score=23.63 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=26.5
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 030982 4 QGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIF 39 (168)
Q Consensus 4 ~s~Kk~a~~N~~~l~~l~~~~~~~n~l~~l~~~~~~ 39 (168)
+..|.+.++|.++-+.+..+.+++.+.++++..+|-
T Consensus 14 K~K~ERk~~~~e~~~kv~tVVlP~l~~~~~~Ivv~v 49 (56)
T PF15012_consen 14 KQKKERKKEMQEAQQKVFTVVLPTLAAVFLFIVVFV 49 (56)
T ss_pred HHHHHHHHHHHHHHHhheeEehhHHHHHHHHHhhee
Confidence 445677889999999999988887766665555443
No 12
>PF14038 YqzE: YqzE-like protein
Probab=47.72 E-value=15 Score=23.86 Aligned_cols=13 Identities=31% Similarity=0.498 Sum_probs=7.7
Q ss_pred HHHHHHHHhhccC
Q 030982 153 KKREKMEKKTSRG 165 (168)
Q Consensus 153 Krq~K~Ekr~~k~ 165 (168)
+|++|++||..|.
T Consensus 24 Rk~~k~~rK~~k~ 36 (54)
T PF14038_consen 24 RKERKEERKEEKE 36 (54)
T ss_pred HHHHHHHHHhcCC
Confidence 4556666666553
No 13
>PF13210 DUF4018: Domain of unknown function (DUF4018)
Probab=43.91 E-value=62 Score=25.86 Aligned_cols=22 Identities=14% Similarity=0.163 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 030982 10 KEENARHMEKLRRLIIACNVIY 31 (168)
Q Consensus 10 a~~N~~~l~~l~~~~~~~n~l~ 31 (168)
+.+|++.+|+.+.+++++..+.
T Consensus 91 ~NrnQqllRF~SIitIG~~S~l 112 (192)
T PF13210_consen 91 ANRNQQLLRFISIITIGIMSIL 112 (192)
T ss_pred cCcchhhhhHHHHHHHHHHHHH
Confidence 4579999999999888775443
No 14
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2.1.1.16 from EC) has a broad substrate specificity of unsaturated phospholipids [].; GO: 0008170 N-methyltransferase activity, 0006644 phospholipid metabolic process
Probab=41.66 E-value=1.2e+02 Score=20.95 Aligned_cols=45 Identities=20% Similarity=0.314 Sum_probs=27.6
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHHHH-Hh-hhHHHHHHHHHHHHHHH
Q 030982 84 FDMSTGGICGYLHDVIYITSFVQVMS-IL-SEKFWYTYLVIPAFGAY 128 (168)
Q Consensus 84 ~DL~~~Gl~ey~~Diiylt~~v~~~~-~~-s~~~W~l~LvIP~y~~Y 128 (168)
..|-++|...+.=.=+|+..++...+ .+ .+..|.+.+.++....+
T Consensus 40 ~~Lvt~G~Y~~vRhPmY~g~~l~~~G~~l~~~s~~~l~~~~~~~~~~ 86 (106)
T PF04191_consen 40 QRLVTTGPYRYVRHPMYLGFLLILLGIALMLGSWLGLLLAVLAFLLY 86 (106)
T ss_pred CcccccCCccCcCChHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34666788888888899988866443 33 34444344444445444
No 15
>PF14147 Spore_YhaL: Sporulation protein YhaL
Probab=40.14 E-value=55 Score=21.05 Aligned_cols=18 Identities=28% Similarity=0.794 Sum_probs=12.0
Q ss_pred HHHHHHHHHH--HHHHHHhh
Q 030982 116 WYTYLVIPAF--GAYQSFGF 133 (168)
Q Consensus 116 W~l~LvIP~y--~~Ykl~~~ 133 (168)
||+|++|-+- .+|++...
T Consensus 3 wWvY~vi~gI~~S~ym~v~t 22 (52)
T PF14147_consen 3 WWVYFVIAGIIFSGYMAVKT 22 (52)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 8888877654 46766653
No 16
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II. Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing.
Probab=39.78 E-value=24 Score=31.71 Aligned_cols=28 Identities=29% Similarity=0.610 Sum_probs=22.4
Q ss_pred HHHHHhhcCcccCCCC---CcccccccCCCCcc
Q 030982 62 YQQLSAMAKPTYTDDG---ELIDGGFDMSTGGI 91 (168)
Q Consensus 62 ~~~l~~~~rP~y~~~G---~Lv~~G~DL~~~Gl 91 (168)
..++++. |.||.+| -++|.|.|+.+.||
T Consensus 11 ~~f~~~~--p~~dgr~v~iai~dtgvd~~~~~l 41 (412)
T cd04857 11 LRFLQKY--PEYDGRGVLIAILDTGVDPGAPGL 41 (412)
T ss_pred HHHHHHC--cCCCCCCcEEEEecCCCCCCCCcc
Confidence 4455554 9999988 58899999998887
No 17
>PF03563 Bunya_G2: Bunyavirus glycoprotein G2; InterPro: IPR005168 Bunyavirus has three genomic segments: small (S), middle-sized (M), and large (L). The S segment encodes the nucleocapsid and a non-structural protein. The M segment codes for two glycoproteins, G1 and G2, and another non-structural protein (NSm). The L segment codes for an RNA polymerase. This entry represents the polyprotein region forming the G2 glycoprotein, which interacts with the IPR005167 from INTERPRO G1 glycoprotein [].
Probab=39.11 E-value=89 Score=26.76 Aligned_cols=37 Identities=27% Similarity=0.537 Sum_probs=24.1
Q ss_pred HHHHHHHHH---HHHHHhhhHHHHHHHHHHHHH-HHHHHhh
Q 030982 97 DVIYITSFV---QVMSILSEKFWYTYLVIPAFG-AYQSFGF 133 (168)
Q Consensus 97 Diiylt~~v---~~~~~~s~~~W~l~LvIP~y~-~Ykl~~~ 133 (168)
.+|+++.+. -++.++-.+-+..||++|+|. +-++|+.
T Consensus 188 ElIil~~~~~~~~i~~~IltktYi~YlliPiF~P~~~~Yg~ 228 (285)
T PF03563_consen 188 ELIILTCLTLIIFIFLIILTKTYICYLLIPIFYPIAYLYGW 228 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555443 344555678999999999986 4455554
No 18
>PF04890 DUF648: Family of unknown function (DUF648) ; InterPro: IPR006974 This is a family of hypothetical proteins from Chlamydia pneumoniae.
Probab=38.14 E-value=51 Score=28.90 Aligned_cols=29 Identities=14% Similarity=0.301 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 030982 12 ENARHMEKLRRLIIACNVIYFVVRMIIFH 40 (168)
Q Consensus 12 ~N~~~l~~l~~~~~~~n~l~~l~~~~~~~ 40 (168)
.=+++|+.+.++.+++.++.+++|+++|+
T Consensus 57 t~eKILKILSyll~PivLIAL~lR~lLH~ 85 (328)
T PF04890_consen 57 TIEKILKILSYLLFPIVLIALLLRYLLHR 85 (328)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34688999999999999999999999985
No 19
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=34.74 E-value=1.3e+02 Score=22.47 Aligned_cols=43 Identities=21% Similarity=0.307 Sum_probs=21.1
Q ss_pred CcchhHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhccC
Q 030982 89 GGICGYL-HDVIYITSFVQVMSILSEKFWYTYLVIPAFGAYQSFGFIKGFL 138 (168)
Q Consensus 89 ~Gl~ey~-~Diiylt~~v~~~~~~s~~~W~l~LvIP~y~~Ykl~~~~~p~~ 138 (168)
+|+.+|. +|+.++=.+.-++.+++ +..|+.++|-+-.++.|--
T Consensus 23 aGiA~y~gi~~~~VRl~~vl~~~~~-------~~~~~~~~Yi~l~~~lp~~ 66 (118)
T PRK10697 23 AGIAHYFDVPVKLVRIIVVLSIFFG-------LFVFTLVAYIILSFALDPM 66 (118)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHh-------hchHHHHHHHHHHHhccCC
Confidence 5677775 56666655532222222 1224445565555555443
No 20
>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function.
Probab=33.25 E-value=29 Score=29.68 Aligned_cols=16 Identities=44% Similarity=0.742 Sum_probs=12.8
Q ss_pred HhHHHHHHHHHhhccC
Q 030982 150 KTRKKREKMEKKTSRG 165 (168)
Q Consensus 150 ~~sKrq~K~Ekr~~k~ 165 (168)
+++||+++|||+++..
T Consensus 240 krk~k~~eMEr~A~~g 255 (278)
T PF06697_consen 240 KRKKKIEEMERRAEEG 255 (278)
T ss_pred hHHHHHHHHHHhhccC
Confidence 5677899999998754
No 21
>PF05101 VirB3: Type IV secretory pathway, VirB3-like protein; InterPro: IPR007792 This entry represents type IV secretion system proteins VirB3, TrbD and AvhB. Type IV secretion systems are found in plant and animal pathogens, as well as in symbiotic bacteria. The tumour-inducing (Ti) plasmid of Rhizobium radiobacter (Agrobacterium tumefaciens) encodes two DNA transfer systems: VirB and Trb, where the virB operon is required for the transfer DNA to the plant host, and the trb system is required for the conjugal transfer of the Ti plasmid between cells of Agrobacterium [, ]. In addition, VirB3 is found associated with bacterial inner and outer membranes and assists T pilus formation as an assembly factor []. The conjugal transfer protein TrbD contains a nucleotide binding motif and may provide energy for the export of DNA or the export of other Trb proteins []. This entry also includes avhB (Agrobacterium virulence homologue virB), which is most similar to the VirB type IV secretion system of Bartonella henselae (Rochalimaea henselae) [].
Probab=31.96 E-value=1.3e+02 Score=20.36 Aligned_cols=27 Identities=11% Similarity=0.202 Sum_probs=17.6
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHh
Q 030982 106 QVMSILSEKFWYTYLVIPAFGAYQSFG 132 (168)
Q Consensus 106 ~~~~~~s~~~W~l~LvIP~y~~Ykl~~ 132 (168)
-++.+.+..+|++.+.+|++.+-..-.
T Consensus 35 ~~l~~~~~~~~~~li~~~~~~~~~~~~ 61 (89)
T PF05101_consen 35 FLLFLIIRSLWYLLIFIILHFIARLTC 61 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455677788888888877664433
No 22
>PF14293 YWFCY: YWFCY protein
Probab=31.93 E-value=1.3e+02 Score=19.92 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=10.0
Q ss_pred HHHHHHH----HHHHHHHHHHHHHH
Q 030982 11 EENARHM----EKLRRLIIACNVIY 31 (168)
Q Consensus 11 ~~N~~~l----~~l~~~~~~~n~l~ 31 (168)
++|.+.| .+.|.+++.+.+++
T Consensus 3 eddlr~L~KImdf~R~iSI~~l~ih 27 (61)
T PF14293_consen 3 EDDLRALRKIMDFMRAISILFLVIH 27 (61)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455444 44555555444444
No 23
>PF06281 DUF1035: Protein of unknown function (DUF1035); InterPro: IPR009379 Sulfolobus virus-like particle SSV1 and its fusellovirus homologues can be found in many acidic (pH less than 4.0) hot springs (greater than 70 degrees C) around the world. SSV1 contains a 15.5-kb double-stranded DNA genome that encodes 34 proteins with greater than 50 amino acids []. A site-specific integrase and a DnaA-like protein have been previously identified by sequence homology, and three structural proteins have been isolated from purified virus and identified by N-terminal sequencing (VP1, VP2, and VP3).; GO: 0005198 structural molecule activity, 0016021 integral to membrane
Probab=31.86 E-value=21 Score=24.24 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHh
Q 030982 118 TYLVIPAFGAYQSFG 132 (168)
Q Consensus 118 l~LvIP~y~~Ykl~~ 132 (168)
..+++|+..+||+++
T Consensus 57 vlIiVPAvi~Yk~yk 71 (73)
T PF06281_consen 57 VLIIVPAVIAYKIYK 71 (73)
T ss_pred HHHHhhhheeeeeee
Confidence 446799999999875
No 24
>PF05814 DUF843: Baculovirus protein of unknown function (DUF843); InterPro: IPR008561 This family consists of several unidentified baculovirus proteins of around 85 residues long with no known function.
Probab=30.42 E-value=1.5e+02 Score=20.84 Aligned_cols=10 Identities=20% Similarity=0.381 Sum_probs=5.1
Q ss_pred HHHHHHHHHh
Q 030982 152 RKKREKMEKK 161 (168)
Q Consensus 152 sKrq~K~Ekr 161 (168)
-||++..|+.
T Consensus 63 ~KKK~~ln~a 72 (83)
T PF05814_consen 63 IKKKRDLNDA 72 (83)
T ss_pred HHHHHHHHHH
Confidence 3555555554
No 25
>TIGR00783 ccs citrate carrier protein, CCS family. These proteins are members of the Citrate:Cation Symporter (CCS) Family (TC 2.A.24). These proteins have 12 GES predicted transmembrane regions. Most members of the CCS family catalyze citrate uptake with either Na+ or H+ as the cotransported cation. However, one member is specific for L-malate and probably functions by a proton symport mechanism.
Probab=29.64 E-value=4e+02 Score=23.57 Aligned_cols=28 Identities=29% Similarity=0.370 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHhhcC--cccCCCCCccccc
Q 030982 56 VAYAIPYQQLSAMAK--PTYTDDGELIDGG 83 (168)
Q Consensus 56 ~~~~~~~~~l~~~~r--P~y~~~G~Lv~~G 83 (168)
+..+++-..+.+.++ |+++.+|+|++.+
T Consensus 131 i~AIi~agll~~lG~~~p~ltG~G~L~~~~ 160 (347)
T TIGR00783 131 IFAIICAGLLSRIGKKRPKLNGHGELVRSE 160 (347)
T ss_pred HHHHHHHHHHHHHhccCCCcCCCceEeecC
Confidence 344455556777754 9999999999765
No 26
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=28.16 E-value=5.7e+02 Score=25.33 Aligned_cols=20 Identities=5% Similarity=0.277 Sum_probs=15.4
Q ss_pred cccccCCCCcchhHHHHHHH
Q 030982 81 DGGFDMSTGGICGYLHDVIY 100 (168)
Q Consensus 81 ~~G~DL~~~Gl~ey~~Diiy 100 (168)
++|.||-..+|..|-.|...
T Consensus 505 NAGFsL~~dSM~~F~~~~~v 524 (800)
T TIGR00934 505 NLGLTLTPESMVSFNKNSYL 524 (800)
T ss_pred cCCCCcCCCcchhhccCccH
Confidence 57999987889888877433
No 27
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=27.25 E-value=21 Score=31.12 Aligned_cols=9 Identities=11% Similarity=0.335 Sum_probs=0.0
Q ss_pred HHHHHHhcC
Q 030982 33 VVRMIIFHS 41 (168)
Q Consensus 33 l~~~~~~~~ 41 (168)
++.++|+|+
T Consensus 67 iIImlF~Rr 75 (381)
T PF05297_consen 67 IIIMLFKRR 75 (381)
T ss_dssp ---------
T ss_pred HHHHHHHHh
Confidence 444667665
No 28
>PHA02513 V1 structural protein V1; Reviewed
Probab=27.21 E-value=78 Score=23.72 Aligned_cols=15 Identities=27% Similarity=0.660 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHh
Q 030982 118 TYLVIPAFGAYQSFG 132 (168)
Q Consensus 118 l~LvIP~y~~Ykl~~ 132 (168)
..+++|+..+||+++
T Consensus 120 VlIiVPAvvaYkiyK 134 (135)
T PHA02513 120 VLIIVPAVVAYKIYK 134 (135)
T ss_pred HHHHHhHHhhhhhhc
Confidence 346799999999875
No 29
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=25.63 E-value=36 Score=14.69 Aligned_cols=9 Identities=44% Similarity=1.202 Sum_probs=5.4
Q ss_pred cccCCCCcc
Q 030982 83 GFDMSTGGI 91 (168)
Q Consensus 83 G~DL~~~Gl 91 (168)
|.||+.+|+
T Consensus 1 gf~l~GgGV 9 (10)
T PF08250_consen 1 GFSLGGGGV 9 (10)
T ss_pred CcccccCcC
Confidence 456766654
No 30
>PRK13899 type IV secretion system protein VirB3; Provisional
Probab=25.24 E-value=2.4e+02 Score=20.06 Aligned_cols=26 Identities=15% Similarity=0.313 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHH-HHH
Q 030982 101 ITSFVQVMSILSEKFWYTYLVIP-AFG 126 (168)
Q Consensus 101 lt~~v~~~~~~s~~~W~l~LvIP-~y~ 126 (168)
...++-++.+.++.+|++.+.+| .++
T Consensus 31 ~~~~~~l~~i~~~~~~~lll~~p~~~~ 57 (97)
T PRK13899 31 NMIISMMVFIWTNDFRILFIAAPGIHG 57 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455566777777777765 666
No 31
>PRK12772 bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional
Probab=24.66 E-value=1.8e+02 Score=27.50 Aligned_cols=15 Identities=40% Similarity=0.441 Sum_probs=8.8
Q ss_pred hHhHHHHHHHHHhhc
Q 030982 149 EKTRKKREKMEKKTS 163 (168)
Q Consensus 149 ~~~sKrq~K~Ekr~~ 163 (168)
+.+.||.+|.++|++
T Consensus 268 ~pT~krl~~ARekGq 282 (609)
T PRK12772 268 EATPKKKSDARKKGQ 282 (609)
T ss_pred CCChhHHHHHHhcCC
Confidence 334556666766664
No 32
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones]
Probab=24.56 E-value=55 Score=33.02 Aligned_cols=40 Identities=35% Similarity=0.555 Sum_probs=28.1
Q ss_pred HHHHHHhhcCcccCCCC---CcccccccCCCCcchh------HHHHHHHHH
Q 030982 61 PYQQLSAMAKPTYTDDG---ELIDGGFDMSTGGICG------YLHDVIYIT 102 (168)
Q Consensus 61 ~~~~l~~~~rP~y~~~G---~Lv~~G~DL~~~Gl~e------y~~Diiylt 102 (168)
++-+|.+. |.||..| .++|.|.|.+++||-- =++|+|=-|
T Consensus 68 a~~FL~ky--PeYDGRgV~IaIlDtGvDP~apGl~vttdGkpKv~dviDct 116 (1304)
T KOG1114|consen 68 AYEFLKKY--PEYDGRGVTIAILDTGVDPSAPGLQVTTDGKPKVKDVIDCT 116 (1304)
T ss_pred HHHHHHhC--cCCCCCceEEEEeecCCCCCCCCceEecCCCcceeEEEecC
Confidence 34456665 9999988 5789999998887632 356665444
No 33
>PF06772 LtrA: Bacterial low temperature requirement A protein (LtrA); InterPro: IPR010640 This entry consists of several bacteria specific low temperature requirement A (LtrA) protein sequences which have been found to be essential for growth at low temperatures in Listeria monocytogenes []. It also contains a number of uncharacterised fungal proteins.
Probab=24.02 E-value=3e+02 Score=23.54 Aligned_cols=49 Identities=8% Similarity=0.189 Sum_probs=33.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhh------hHH-HHHHHHHHHHHHHHHHhhhhccC
Q 030982 90 GICGYLHDVIYITSFVQVMSILS------EKF-WYTYLVIPAFGAYQSFGFIKGFL 138 (168)
Q Consensus 90 Gl~ey~~Diiylt~~v~~~~~~s------~~~-W~l~LvIP~y~~Ykl~~~~~p~~ 138 (168)
...|-.+|++++..+.|+...+. .-. -++.+.+|....|-........+
T Consensus 5 t~lELFfDLvFV~ai~~lt~~l~~~~~~~~~~~~~~~~f~~~w~~W~~~t~~~nr~ 60 (354)
T PF06772_consen 5 TWLELFFDLVFVFAISQLTHLLHHDPSWGGLLLEFLLLFLALWWIWSYQTWYANRF 60 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 35699999999999999987653 133 45666666666665555444433
No 34
>KOG4055 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.09 E-value=39 Score=27.41 Aligned_cols=17 Identities=53% Similarity=0.636 Sum_probs=10.8
Q ss_pred cchHhHHHHHHHHHhhc
Q 030982 147 EDEKTRKKREKMEKKTS 163 (168)
Q Consensus 147 ~~~~~sKrq~K~Ekr~~ 163 (168)
.+++.+||+.|+.|+.+
T Consensus 123 aEeKTaKKRaKRqk~Kq 139 (213)
T KOG4055|consen 123 AEEKTAKKRAKRQKKKQ 139 (213)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45566777776666654
Done!