Query 030984
Match_columns 168
No_of_seqs 26 out of 28
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 11:42:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030984.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030984hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vjpa1 c.2.1.3 (A:0-209,A:317 14.4 26 0.0019 26.8 1.0 20 130-149 192-211 (275)
2 d1u1ia1 c.2.1.3 (A:1-227,A:333 12.9 31 0.0023 26.4 1.2 21 129-149 207-227 (287)
3 d2c9aa1 b.1.1.4 (A:184-279) Re 11.6 34 0.0025 19.9 0.8 24 144-168 15-38 (96)
4 d1ve4a1 c.94.1.1 (A:1-206) ATP 11.3 10 0.00074 28.0 -2.2 40 98-137 104-143 (206)
5 d1u8fo1 c.2.1.3 (O:3-151,O:316 10.6 34 0.0025 24.3 0.6 13 145-157 89-101 (169)
6 d1mexl1 b.1.1.1 (L:1-107) Immu 10.1 51 0.0037 20.6 1.3 20 145-166 16-35 (107)
7 d1h3da1 c.94.1.1 (A:5-224) ATP 9.7 18 0.0013 26.8 -1.2 19 103-121 121-139 (220)
8 d1uwya2 c.56.5.1 (A:1-296) Car 9.3 51 0.0037 24.2 1.3 14 114-127 259-272 (296)
9 d1t3ta5 d.79.4.1 (A:617-816) F 9.3 65 0.0048 23.0 1.8 43 104-146 106-159 (200)
10 d1cf2o1 c.2.1.3 (O:1-138,O:304 9.3 41 0.003 23.4 0.6 9 147-155 80-88 (171)
No 1
>d1vjpa1 c.2.1.3 (A:0-209,A:317-381) Hypothetical protein TM1419 {Thermotoga maritima [TaxId: 2336]}
Probab=14.38 E-value=26 Score=26.82 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=18.2
Q ss_pred cchhhhhhcCCCcccccCcc
Q 030984 130 TGCQDLAKQKKVPFISDDLE 149 (168)
Q Consensus 130 ~GCqdlAk~k~V~FlsdDl~ 149 (168)
-+-+++|++++||.+-||++
T Consensus 192 Pal~ela~~~gvPi~GdD~K 211 (275)
T d1vjpa1 192 PAFVELAKENNLVVFGDDGS 211 (275)
T ss_dssp HHHHHHHHHTTEEEECSSBH
T ss_pred HHHHHHHHHcCCcEEcccch
Confidence 37899999999999999985
No 2
>d1u1ia1 c.2.1.3 (A:1-227,A:333-392) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=12.88 E-value=31 Score=26.43 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=18.5
Q ss_pred ccchhhhhhcCCCcccccCcc
Q 030984 129 FTGCQDLAKQKKVPFISDDLE 149 (168)
Q Consensus 129 f~GCqdlAk~k~V~FlsdDl~ 149 (168)
.-+-+++|++++||.+-||+|
T Consensus 207 ~Pal~ela~~~gvPiaGdD~K 227 (287)
T d1u1ia1 207 IPALKELAEKKGVPHAGNDGK 227 (287)
T ss_dssp SHHHHHHHHTTTCEEEESSBC
T ss_pred CHHHHHHHHHcCCCEeccchh
Confidence 346799999999999999986
No 3
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.56 E-value=34 Score=19.91 Aligned_cols=24 Identities=8% Similarity=0.281 Sum_probs=14.3
Q ss_pred cccCcceeecccccccccCcceecC
Q 030984 144 ISDDLELECKGKDKYKCGSNVFWKW 168 (168)
Q Consensus 144 lsdDl~lECeGkdk~kCgSnvfwkw 168 (168)
..+++.|+|+-.....- ..++|+|
T Consensus 15 ~G~~v~l~C~~~g~p~p-~~~~~~~ 38 (96)
T d2c9aa1 15 AGQFATFQCSAIGRTVA-GDRLWLQ 38 (96)
T ss_dssp SSSCEEEEEEEESCCCS-SCEEEEE
T ss_pred CCCEEEEEEEEeecCCC-cEEEEEe
Confidence 46789999965433222 3456665
No 4
>d1ve4a1 c.94.1.1 (A:1-206) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=11.31 E-value=10 Score=28.04 Aligned_cols=40 Identities=23% Similarity=0.222 Sum_probs=25.5
Q ss_pred hhhhhhhhhccccccceeeeeeeccccCCCCccchhhhhh
Q 030984 98 ELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAK 137 (168)
Q Consensus 98 eLNDKKRlATS~ANfaRa~TV~~GtCkFP~Nf~GCqdlAk 137 (168)
+..+-+|+||.+-|++|.|--+-|.=..---..|+-.+|-
T Consensus 104 ~~~~~~rIATkYpnit~~~~~~~gi~~~ii~~~Gs~E~ap 143 (206)
T d1ve4a1 104 DTGPIRRVATKYPNFTARLLKERGWAADVVELSGNIELAA 143 (206)
T ss_dssp CCSCCCEEEESCHHHHHHHHHHTTCCCEEEECSSCTHHHH
T ss_pred ccCCccEeeHHHHHHHHHHHHhcCCcceEEEEEccccccc
Confidence 4556689999999999998665553211122345555554
No 5
>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}
Probab=10.56 E-value=34 Score=24.29 Aligned_cols=13 Identities=15% Similarity=0.181 Sum_probs=10.5
Q ss_pred ccCcceeeccccc
Q 030984 145 SDDLELECKGKDK 157 (168)
Q Consensus 145 sdDl~lECeGkdk 157 (168)
.=|+-|||+|+-.
T Consensus 89 ~vDiViEcTG~f~ 101 (169)
T d1u8fo1 89 GAEYVVESTGVFT 101 (169)
T ss_dssp TCCEEEECSSSCC
T ss_pred CCCEEEEecceec
Confidence 4589999999854
No 6
>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}
Probab=10.14 E-value=51 Score=20.58 Aligned_cols=20 Identities=30% Similarity=0.836 Sum_probs=14.6
Q ss_pred ccCcceeecccccccccCccee
Q 030984 145 SDDLELECKGKDKYKCGSNVFW 166 (168)
Q Consensus 145 sdDl~lECeGkdk~kCgSnvfw 166 (168)
-+-..|+|+..+ ...++|||
T Consensus 16 G~svtl~C~~s~--~~~~~~~W 35 (107)
T d1mexl1 16 GNRVSVTCKASQ--NVGTNVAW 35 (107)
T ss_dssp TSCEEEEEEESS--CCTTCEEE
T ss_pred CCCEEEEEEeCC--CCCCceEE
Confidence 467889998654 34578998
No 7
>d1h3da1 c.94.1.1 (A:5-224) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Escherichia coli [TaxId: 562]}
Probab=9.69 E-value=18 Score=26.82 Aligned_cols=19 Identities=42% Similarity=0.489 Sum_probs=15.9
Q ss_pred hhhhccccccceeeeeeec
Q 030984 103 KRLATSGANFARAYTVQFG 121 (168)
Q Consensus 103 KRlATS~ANfaRa~TV~~G 121 (168)
+|+||.|-|++|.|--+-|
T Consensus 121 ~RIATkYp~it~~y~~~~g 139 (220)
T d1h3da1 121 KRIATSYPHLLKRYLDQKG 139 (220)
T ss_dssp CEEEESCHHHHHHHHHHHT
T ss_pred CEEhhhhhHHHHHHHHhcc
Confidence 5999999999999865544
No 8
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.34 E-value=51 Score=24.23 Aligned_cols=14 Identities=29% Similarity=0.757 Sum_probs=12.8
Q ss_pred eeeeeeeccccCCC
Q 030984 114 RAYTVQFGTCKFPE 127 (168)
Q Consensus 114 Ra~TV~~GtCkFP~ 127 (168)
-++|++.|.|++|.
T Consensus 259 ~~~T~El~~~~~P~ 272 (296)
T d1uwya2 259 FEITLELSCCKYPR 272 (296)
T ss_dssp BCCEEEEESSSSCC
T ss_pred EEEEEEecCCCCCC
Confidence 67999999999996
No 9
>d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]}
Probab=9.27 E-value=65 Score=23.03 Aligned_cols=43 Identities=7% Similarity=-0.034 Sum_probs=28.1
Q ss_pred hhhccccccceeeeeeeccccCCCC-----------ccchhhhhhcCCCccccc
Q 030984 104 RLATSGANFARAYTVQFGTCKFPEN-----------FTGCQDLAKQKKVPFISD 146 (168)
Q Consensus 104 RlATS~ANfaRa~TV~~GtCkFP~N-----------f~GCqdlAk~k~V~Flsd 146 (168)
+|+.+|++--...+..+..|.-+.| -.||.+++++.++||++-
T Consensus 106 Nl~a~Ga~~~~~i~~~~n~~~~~~~~~e~~~~~~~~~~~~~d~c~~l~ip~i~G 159 (200)
T d1t3ta5 106 NIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQLGLTIPVG 159 (200)
T ss_dssp HHTTSBCCSGGGCEEEEEEECBTTSTTHHHHHHHHHHHHHTTHHHHHTCEEEEE
T ss_pred hheeccccccceeehhhhhhhccCCChhhhhHHHHHHHHHHHHHHHcCCCcCCC
Confidence 4666776654455555555543222 147899999999999874
No 10
>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}
Probab=9.26 E-value=41 Score=23.36 Aligned_cols=9 Identities=22% Similarity=0.826 Sum_probs=0.0
Q ss_pred Ccceeeccc
Q 030984 147 DLELECKGK 155 (168)
Q Consensus 147 Dl~lECeGk 155 (168)
|+-|||.|+
T Consensus 80 DvViEcTG~ 88 (171)
T d1cf2o1 80 DIVIDCTPE 88 (171)
T ss_dssp SEEEECCST
T ss_pred CEEEEccCC
Done!