Query 030986
Match_columns 168
No_of_seqs 19 out of 21
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 11:45:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030986.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030986hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c4ka1 c.61.1.2 (A:7-166) PRP 4.6 1.4E+02 0.0099 20.7 1.3 16 58-73 85-100 (160)
2 d1rm6b1 d.87.2.1 (B:217-323) 4 4.2 96 0.007 19.6 0.2 13 90-102 7-19 (107)
3 d2vnud2 b.40.4.5 (D:911-998) E 3.9 94 0.0069 20.2 -0.0 19 56-74 13-31 (88)
4 d1dkua1 c.61.1.2 (A:8-166) Pho 3.3 2E+02 0.015 19.7 1.3 16 58-73 82-97 (159)
5 d1uoua2 c.27.1.1 (A:101-373) T 3.3 1.6E+02 0.012 21.2 0.8 8 98-105 2-9 (273)
6 d2o35a1 a.293.1.1 (A:2-80) Hyp 3.3 1.4E+02 0.0099 19.8 0.3 9 65-73 37-45 (79)
7 d1whva_ d.58.7.1 (A:) Poly(A)- 3.2 1.1E+02 0.0078 20.9 -0.4 9 98-106 21-29 (100)
8 d1t3ta3 d.284.1.2 (A:1-152) FG 3.0 4.3E+02 0.031 17.5 2.8 17 59-75 74-90 (152)
9 d1el0a_ d.9.1.1 (A:) CC chemok 2.9 3.4E+02 0.025 16.3 2.0 16 32-53 7-22 (74)
10 d1kshb_ b.1.18.8 (B:) GMP-PDE 2.8 1.2E+02 0.0085 21.9 -0.5 45 45-91 63-116 (149)
No 1
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.58 E-value=1.4e+02 Score=20.66 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=13.6
Q ss_pred ceeeeecccccchhhh
Q 030986 58 AQTLVVPQFGFTRVIR 73 (168)
Q Consensus 58 ~~~~V~p~fgf~r~~~ 73 (168)
-.++|+|-||+.|--.
T Consensus 85 ~It~ViPY~~YaRQDk 100 (160)
T d2c4ka1 85 NIIGVIPYFPYSKQSK 100 (160)
T ss_dssp CEEEEESSCTTTTTTS
T ss_pred cceeecccchhhhccc
Confidence 4789999999998764
No 2
>d1rm6b1 d.87.2.1 (B:217-323) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=4.16 E-value=96 Score=19.57 Aligned_cols=13 Identities=38% Similarity=0.820 Sum_probs=8.9
Q ss_pred hhhhccCCCCCcc
Q 030986 90 EKLTRRSPLDFPI 102 (168)
Q Consensus 90 Ek~t~rSplDfP~ 102 (168)
+|+.+|..+||++
T Consensus 7 ~K~~~R~a~D~a~ 19 (107)
T d1rm6b1 7 SKVRIRDAVDFPL 19 (107)
T ss_dssp EEECSSSSSCCCS
T ss_pred eEeccCcchHHHH
Confidence 4556777788875
No 3
>d2vnud2 b.40.4.5 (D:911-998) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=3.93 E-value=94 Score=20.17 Aligned_cols=19 Identities=32% Similarity=0.630 Sum_probs=13.2
Q ss_pred ccceeeeecccccchhhhh
Q 030986 56 RMAQTLVVPQFGFTRVIRY 74 (168)
Q Consensus 56 ~~~~~~V~p~fgf~r~~~~ 74 (168)
.-++.+.||+||+=-.+.+
T Consensus 13 ~NGivVfVPkyGiEG~v~l 31 (88)
T d2vnud2 13 NNGIVVLVPKFGVEGLIRL 31 (88)
T ss_dssp TTEEEEEETTTTEEEEEEH
T ss_pred cccEEEEEeccceeEEEEE
Confidence 3456778999998665544
No 4
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=3.34 E-value=2e+02 Score=19.69 Aligned_cols=16 Identities=31% Similarity=0.748 Sum_probs=13.5
Q ss_pred ceeeeecccccchhhh
Q 030986 58 AQTLVVPQFGFTRVIR 73 (168)
Q Consensus 58 ~~~~V~p~fgf~r~~~ 73 (168)
..++|+|-||+.|--+
T Consensus 82 ~i~~ViPY~~YsRQDr 97 (159)
T d1dkua1 82 TINIVIPYYGYARQDR 97 (159)
T ss_dssp EEEEEESSCTTTTCCS
T ss_pred ceEEeecccchhhhcc
Confidence 4689999999999774
No 5
>d1uoua2 c.27.1.1 (A:101-373) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.31 E-value=1.6e+02 Score=21.23 Aligned_cols=8 Identities=38% Similarity=1.240 Sum_probs=4.0
Q ss_pred CCCccccc
Q 030986 98 LDFPIEWE 105 (168)
Q Consensus 98 lDfP~Ew~ 105 (168)
|+||++|.
T Consensus 2 ~~~p~~~~ 9 (273)
T d1uoua2 2 LEWPEAWR 9 (273)
T ss_dssp CCCCGGGG
T ss_pred CcCCcccC
Confidence 45555553
No 6
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=3.30 E-value=1.4e+02 Score=19.78 Aligned_cols=9 Identities=33% Similarity=0.313 Sum_probs=6.9
Q ss_pred ccccchhhh
Q 030986 65 QFGFTRVIR 73 (168)
Q Consensus 65 ~fgf~r~~~ 73 (168)
-.||||.+-
T Consensus 37 LaGFCRNCL 45 (79)
T d2o35a1 37 LAGFCRNCL 45 (79)
T ss_dssp HHSCCHHHH
T ss_pred HHHHHHHHH
Confidence 359999983
No 7
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=3.15 E-value=1.1e+02 Score=20.87 Aligned_cols=9 Identities=44% Similarity=1.235 Sum_probs=6.5
Q ss_pred CCCcccccc
Q 030986 98 LDFPIEWEK 106 (168)
Q Consensus 98 lDfP~Ew~r 106 (168)
|.||.+|.+
T Consensus 21 ~tFP~~Wk~ 29 (100)
T d1whva_ 21 VTFPKEWKT 29 (100)
T ss_dssp EECCTTCCH
T ss_pred EeCCcccch
Confidence 468999853
No 8
>d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]}
Probab=2.97 E-value=4.3e+02 Score=17.47 Aligned_cols=17 Identities=24% Similarity=0.169 Sum_probs=13.0
Q ss_pred eeeeecccccchhhhhh
Q 030986 59 QTLVVPQFGFTRVIRYN 75 (168)
Q Consensus 59 ~~~V~p~fgf~r~~~~~ 75 (168)
.-+|.||+|+.-+.+.+
T Consensus 74 ~~~V~PR~gtiSPWSSK 90 (152)
T d1t3ta3 74 LLLVTPRPGTISPWSSK 90 (152)
T ss_dssp EEEEEECTTCCCHHHHH
T ss_pred eEEEeeccccccchHHH
Confidence 46789999998776643
No 9
>d1el0a_ d.9.1.1 (A:) CC chemokine I-309 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.93 E-value=3.4e+02 Score=16.25 Aligned_cols=16 Identities=19% Similarity=0.528 Sum_probs=9.8
Q ss_pred CCCcccccCcCcCCCCCCCcCC
Q 030986 32 TSHSCSCSMESVPNFSSNRLIP 53 (168)
Q Consensus 32 ~s~Sc~~s~~s~p~F~s~rl~~ 53 (168)
+++.| |- +|.++++-.
T Consensus 7 ~~s~C-C~-----~~~~~~Ip~ 22 (74)
T d1el0a_ 7 PFSRC-CF-----SFAEQEIPL 22 (74)
T ss_dssp SSCCC-CS-----SCSCSCCCT
T ss_pred CcCCe-ec-----cccCCcCCh
Confidence 35568 87 777655444
No 10
>d1kshb_ b.1.18.8 (B:) GMP-PDE delta {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.85 E-value=1.2e+02 Score=21.92 Aligned_cols=45 Identities=29% Similarity=0.413 Sum_probs=26.7
Q ss_pred CCCCCCcCCCcccceeeee---------cccccchhhhhhhccccceeeeCchhhh
Q 030986 45 NFSSNRLIPNNRMAQTLVV---------PQFGFTRVIRYNQRAKRQVVRMAPEEEK 91 (168)
Q Consensus 45 ~F~s~rl~~~~~~~~~~V~---------p~fgf~r~~~~~~R~~~~vv~~aPe~Ek 91 (168)
.|++|.-|.+.+|-+++.. =.||||=+-+.+.|. +++-.+|..+.
T Consensus 63 ~Fs~~e~i~~Frmierhyfr~~lle~~dFeFGF~IP~S~NTwe--~iye~p~~~~~ 116 (149)
T d1kshb_ 63 NFSSTEQMEKFRLEQKVYFKGQCLEEWFFEFGFVIPNSTNTWQ--SLIEAAPESQM 116 (149)
T ss_dssp EEEESSCEEEEEEEEEEEETTEEEEEEEEEEEEECTTEEEEEE--EEEC-------
T ss_pred EEecCcccccceEEEEEeecCceeeEEEeeeeeEecCCCcchh--heeecCCcccc
Confidence 4666666666666665533 258999999988888 66666665544
Done!