Query 030988
Match_columns 168
No_of_seqs 122 out of 1054
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 11:48:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9c_A Caffeic acid O-methyltr 100.0 3.6E-28 1.2E-32 194.5 13.6 166 1-167 81-246 (364)
2 4a6d_A Hydroxyindole O-methylt 99.9 1.9E-28 6.5E-33 195.4 7.9 154 1-162 63-219 (353)
3 3reo_A (ISO)eugenol O-methyltr 99.9 8.4E-28 2.9E-32 192.6 11.5 166 1-167 83-248 (368)
4 3lst_A CALO1 methyltransferase 99.9 5.3E-26 1.8E-30 180.7 9.3 148 1-160 75-222 (348)
5 1fp2_A Isoflavone O-methyltran 99.9 2.1E-25 7.1E-30 177.4 10.7 156 1-166 74-232 (352)
6 3gwz_A MMCR; methyltransferase 99.9 1.6E-25 5.5E-30 179.3 10.0 151 1-162 91-242 (369)
7 3i53_A O-methyltransferase; CO 99.9 1.3E-25 4.4E-30 177.2 7.7 151 1-162 58-209 (332)
8 1zg3_A Isoflavanone 4'-O-methy 99.9 2.2E-25 7.4E-30 177.7 9.1 163 1-167 68-238 (358)
9 1fp1_D Isoliquiritigenin 2'-O- 99.9 3.9E-25 1.3E-29 177.1 9.9 166 1-167 88-254 (372)
10 2ip2_A Probable phenazine-spec 99.9 2.8E-24 9.5E-29 169.5 10.3 147 1-162 61-207 (334)
11 1qzz_A RDMB, aclacinomycin-10- 99.9 6.5E-23 2.2E-27 163.8 7.5 151 1-162 69-222 (374)
12 1tw3_A COMT, carminomycin 4-O- 99.9 1.2E-22 4E-27 161.7 7.8 151 1-162 72-223 (360)
13 3dp7_A SAM-dependent methyltra 99.9 7.3E-23 2.5E-27 163.5 2.7 145 1-162 70-219 (363)
14 2r3s_A Uncharacterized protein 99.8 9.1E-21 3.1E-25 149.1 7.5 144 1-162 59-205 (335)
15 1x19_A CRTF-related protein; m 99.8 4.4E-21 1.5E-25 152.7 5.2 140 1-162 84-230 (359)
16 3mcz_A O-methyltransferase; ad 99.8 2.6E-20 8.9E-25 147.7 9.0 141 1-162 76-219 (352)
17 2qe6_A Uncharacterized protein 98.2 8.1E-06 2.8E-10 62.4 8.5 42 121-162 76-121 (274)
18 1ve3_A Hypothetical protein PH 98.1 2.3E-06 7.9E-11 62.7 3.8 38 123-162 39-77 (227)
19 3dtn_A Putative methyltransfer 98.0 1.6E-05 5.6E-10 58.5 6.9 51 112-162 34-85 (234)
20 3e05_A Precorrin-6Y C5,15-meth 97.9 2.2E-05 7.5E-10 56.8 6.4 50 112-162 31-81 (204)
21 4dzr_A Protein-(glutamine-N5) 97.9 2.2E-05 7.6E-10 56.6 5.7 52 112-163 20-72 (215)
22 2fca_A TRNA (guanine-N(7)-)-me 97.8 2E-05 7E-10 57.7 5.2 41 122-162 38-79 (213)
23 3hm2_A Precorrin-6Y C5,15-meth 97.8 1.7E-05 5.8E-10 55.8 4.5 50 112-162 16-66 (178)
24 1yzh_A TRNA (guanine-N(7)-)-me 97.8 2.4E-05 8.2E-10 57.1 5.2 41 122-162 41-82 (214)
25 3dlc_A Putative S-adenosyl-L-m 97.8 2.4E-05 8.3E-10 56.6 4.6 50 110-162 33-83 (219)
26 3jwh_A HEN1; methyltransferase 97.8 2.8E-05 9.5E-10 56.7 4.9 49 113-162 21-70 (217)
27 1jsx_A Glucose-inhibited divis 97.8 1.8E-05 6.1E-10 57.2 3.8 40 123-162 66-106 (207)
28 3dxy_A TRNA (guanine-N(7)-)-me 97.8 3.3E-05 1.1E-09 57.0 5.3 40 122-161 34-74 (218)
29 4gek_A TRNA (CMO5U34)-methyltr 97.8 0.00012 4E-09 55.6 8.3 49 112-162 62-113 (261)
30 3ege_A Putative methyltransfer 97.8 6E-05 2E-09 56.7 6.7 51 111-164 24-75 (261)
31 3jwg_A HEN1, methyltransferase 97.7 2.6E-05 9E-10 56.9 4.5 49 113-162 21-70 (219)
32 3mb5_A SAM-dependent methyltra 97.7 2.2E-05 7.4E-10 58.7 4.0 51 111-162 83-135 (255)
33 1yb2_A Hypothetical protein TA 97.7 3.5E-05 1.2E-09 58.6 4.9 50 112-162 101-152 (275)
34 3vc1_A Geranyl diphosphate 2-C 97.7 8.4E-05 2.9E-09 57.4 7.0 64 97-162 93-157 (312)
35 3g5l_A Putative S-adenosylmeth 97.7 5E-05 1.7E-09 56.6 5.3 49 112-162 35-84 (253)
36 3dh0_A SAM dependent methyltra 97.7 3.6E-05 1.2E-09 56.0 4.3 50 112-162 28-79 (219)
37 3hem_A Cyclopropane-fatty-acyl 97.7 6.8E-05 2.3E-09 57.5 5.9 50 111-162 62-112 (302)
38 3mq2_A 16S rRNA methyltransfer 97.7 4.4E-05 1.5E-09 55.7 4.5 40 120-159 25-65 (218)
39 3g07_A 7SK snRNA methylphospha 97.7 4E-05 1.4E-09 58.8 4.4 41 122-162 46-87 (292)
40 2p35_A Trans-aconitate 2-methy 97.6 3.8E-05 1.3E-09 57.2 4.1 50 112-162 24-74 (259)
41 3g5t_A Trans-aconitate 3-methy 97.6 9.4E-05 3.2E-09 56.7 6.4 42 121-162 35-78 (299)
42 3bus_A REBM, methyltransferase 97.6 0.00013 4.4E-09 54.9 7.0 49 111-161 51-100 (273)
43 1nkv_A Hypothetical protein YJ 97.6 0.0001 3.5E-09 54.8 6.3 50 111-162 26-76 (256)
44 3ckk_A TRNA (guanine-N(7)-)-me 97.6 3.2E-05 1.1E-09 57.7 3.4 41 121-161 45-86 (235)
45 2plw_A Ribosomal RNA methyltra 97.6 9.5E-05 3.3E-09 53.1 5.7 45 112-156 12-58 (201)
46 3gjy_A Spermidine synthase; AP 97.6 3.7E-05 1.3E-09 60.1 3.7 40 124-163 91-131 (317)
47 3b3j_A Histone-arginine methyl 97.6 9.9E-05 3.4E-09 60.8 6.3 50 111-162 148-197 (480)
48 3mgg_A Methyltransferase; NYSG 97.6 6E-05 2E-09 56.9 4.6 43 120-162 35-78 (276)
49 3orh_A Guanidinoacetate N-meth 97.6 3.2E-05 1.1E-09 57.6 3.0 40 122-162 60-100 (236)
50 2vdv_E TRNA (guanine-N(7)-)-me 97.6 5.8E-05 2E-09 56.4 4.0 41 121-161 48-89 (246)
51 2nyu_A Putative ribosomal RNA 97.5 0.00024 8.3E-09 50.6 7.1 45 112-156 12-65 (196)
52 3ou2_A SAM-dependent methyltra 97.5 0.00015 5E-09 52.5 5.9 50 112-163 36-86 (218)
53 3gu3_A Methyltransferase; alph 97.5 9.9E-05 3.4E-09 56.2 5.1 49 113-161 13-63 (284)
54 2yxd_A Probable cobalt-precorr 97.5 0.00017 6E-09 50.5 5.7 48 112-162 26-74 (183)
55 4dcm_A Ribosomal RNA large sub 97.5 0.00014 4.7E-09 58.1 5.7 50 112-162 213-263 (375)
56 3p2e_A 16S rRNA methylase; met 97.5 0.00012 4.1E-09 54.2 5.0 48 112-161 16-65 (225)
57 3fzg_A 16S rRNA methylase; met 97.5 4E-05 1.4E-09 55.7 2.3 42 121-162 48-90 (200)
58 1xtp_A LMAJ004091AAA; SGPP, st 97.5 6.1E-05 2.1E-09 56.0 3.3 50 111-162 83-133 (254)
59 2pwy_A TRNA (adenine-N(1)-)-me 97.5 0.00018 6.2E-09 53.5 5.9 51 111-162 86-138 (258)
60 3adn_A Spermidine synthase; am 97.5 6.7E-05 2.3E-09 58.0 3.6 42 121-162 82-124 (294)
61 2avd_A Catechol-O-methyltransf 97.5 8E-05 2.7E-09 54.6 3.9 43 120-162 67-111 (229)
62 1nv8_A HEMK protein; class I a 97.5 9.7E-05 3.3E-09 56.6 4.5 40 122-162 123-163 (284)
63 1o54_A SAM-dependent O-methylt 97.5 0.00019 6.4E-09 54.5 6.0 51 111-162 102-154 (277)
64 3bkx_A SAM-dependent methyltra 97.5 0.00031 1.1E-08 52.8 7.2 44 111-155 33-77 (275)
65 3g89_A Ribosomal RNA small sub 97.5 8.3E-05 2.8E-09 55.9 4.0 41 121-161 79-120 (249)
66 3dli_A Methyltransferase; PSI- 97.5 0.00015 5.2E-09 53.6 5.4 48 113-162 32-80 (240)
67 2o57_A Putative sarcosine dime 97.5 0.00019 6.7E-09 54.7 6.1 49 111-161 68-121 (297)
68 3f4k_A Putative methyltransfer 97.5 0.00015 5.1E-09 54.0 5.3 48 113-161 37-85 (257)
69 2esr_A Methyltransferase; stru 97.5 0.00021 7.3E-09 50.2 5.7 49 113-162 22-71 (177)
70 1xxl_A YCGJ protein; structura 97.5 0.00017 5.7E-09 53.4 5.4 49 110-161 10-59 (239)
71 1xdz_A Methyltransferase GIDB; 97.5 0.00012 4E-09 54.4 4.5 42 120-161 68-110 (240)
72 1vl5_A Unknown conserved prote 97.4 0.00014 4.8E-09 54.4 4.9 48 112-162 28-76 (260)
73 1kpg_A CFA synthase;, cyclopro 97.4 0.00018 6E-09 54.6 5.4 49 112-162 55-104 (287)
74 1m6y_A S-adenosyl-methyltransf 97.4 0.00019 6.3E-09 55.7 5.5 50 112-162 17-67 (301)
75 3kkz_A Uncharacterized protein 97.4 0.00014 4.9E-09 54.6 4.8 49 113-162 37-86 (267)
76 3ujc_A Phosphoethanolamine N-m 97.4 9E-05 3.1E-09 55.3 3.6 50 111-162 45-95 (266)
77 2ozv_A Hypothetical protein AT 97.4 0.0001 3.4E-09 55.7 3.9 43 120-162 34-77 (260)
78 2b3t_A Protein methyltransfera 97.4 0.00029 9.9E-09 53.4 6.4 49 112-162 101-150 (276)
79 1jg1_A PIMT;, protein-L-isoasp 97.4 0.00017 5.9E-09 53.3 5.0 50 111-162 81-131 (235)
80 4hg2_A Methyltransferase type 97.4 0.00019 6.5E-09 54.3 5.3 44 122-167 39-83 (257)
81 3pfg_A N-methyltransferase; N, 97.4 0.00021 7.2E-09 53.5 5.6 40 121-162 49-89 (263)
82 3ntv_A MW1564 protein; rossman 97.4 0.00011 3.6E-09 54.5 3.8 43 120-162 69-112 (232)
83 1pjz_A Thiopurine S-methyltran 97.4 0.00021 7.3E-09 51.8 5.3 47 113-162 14-61 (203)
84 3njr_A Precorrin-6Y methylase; 97.4 0.00027 9.1E-09 51.4 5.9 47 113-162 47-94 (204)
85 2pjd_A Ribosomal RNA small sub 97.4 9.8E-05 3.3E-09 58.0 3.5 50 112-162 187-237 (343)
86 1fbn_A MJ fibrillarin homologu 97.4 0.00012 4.2E-09 54.0 3.9 40 120-159 72-112 (230)
87 3bkw_A MLL3908 protein, S-aden 97.4 0.00014 4.8E-09 53.5 4.2 49 112-162 34-83 (243)
88 2fk8_A Methoxy mycolic acid sy 97.4 0.00022 7.7E-09 55.0 5.4 50 111-162 80-130 (318)
89 1iy9_A Spermidine synthase; ro 97.4 0.0001 3.6E-09 56.2 3.3 41 122-162 75-116 (275)
90 2gpy_A O-methyltransferase; st 97.4 0.00019 6.3E-09 52.9 4.5 42 121-162 53-95 (233)
91 3e8s_A Putative SAM dependent 97.4 0.00049 1.7E-08 49.8 6.8 48 112-162 43-91 (227)
92 2xvm_A Tellurite resistance pr 97.4 0.00029 9.8E-09 50.2 5.4 48 112-162 23-71 (199)
93 1i9g_A Hypothetical protein RV 97.3 0.00033 1.1E-08 52.9 6.0 51 111-162 89-141 (280)
94 2fhp_A Methylase, putative; al 97.3 0.00037 1.3E-08 49.1 5.9 42 120-162 42-84 (187)
95 3kr9_A SAM-dependent methyltra 97.3 9.5E-05 3.3E-09 55.0 2.7 41 122-162 15-56 (225)
96 3ccf_A Cyclopropane-fatty-acyl 97.3 0.00026 8.8E-09 53.6 5.2 48 112-162 48-96 (279)
97 1u2z_A Histone-lysine N-methyl 97.3 0.00033 1.1E-08 56.9 6.0 49 112-161 233-282 (433)
98 3fpf_A Mtnas, putative unchara 97.3 0.00087 3E-08 51.8 8.0 43 120-162 120-163 (298)
99 2yxe_A Protein-L-isoaspartate 97.3 0.00032 1.1E-08 50.8 5.4 50 112-162 68-119 (215)
100 3uwp_A Histone-lysine N-methyl 97.3 0.00036 1.2E-08 56.4 6.0 50 111-161 163-213 (438)
101 2h00_A Methyltransferase 10 do 97.3 0.00011 3.8E-09 54.9 2.8 41 122-162 65-106 (254)
102 3mti_A RRNA methylase; SAM-dep 97.3 0.00018 6.1E-09 51.0 3.7 41 120-162 20-61 (185)
103 1o9g_A RRNA methyltransferase; 97.3 0.00018 6.3E-09 53.6 3.9 49 113-162 43-94 (250)
104 2yqz_A Hypothetical protein TT 97.3 0.00053 1.8E-08 51.0 6.4 40 120-161 37-77 (263)
105 3cc8_A Putative methyltransfer 97.3 0.00011 3.6E-09 53.6 2.4 47 112-162 24-71 (230)
106 1dus_A MJ0882; hypothetical pr 97.3 0.00037 1.3E-08 49.2 5.3 48 112-162 43-91 (194)
107 3duw_A OMT, O-methyltransferas 97.3 0.0002 6.9E-09 52.3 3.9 42 121-162 57-100 (223)
108 3bwc_A Spermidine synthase; SA 97.3 0.00018 6.1E-09 55.7 3.8 42 121-162 94-136 (304)
109 3iv6_A Putative Zn-dependent a 97.3 0.00033 1.1E-08 53.2 5.1 49 111-162 35-84 (261)
110 3tfw_A Putative O-methyltransf 97.3 0.00021 7.2E-09 53.5 3.9 43 120-162 61-105 (248)
111 3ggd_A SAM-dependent methyltra 97.3 0.00043 1.5E-08 51.2 5.5 41 120-162 54-95 (245)
112 3eey_A Putative rRNA methylase 97.2 0.00022 7.7E-09 51.0 3.8 43 120-162 20-64 (197)
113 3thr_A Glycine N-methyltransfe 97.2 0.0002 6.9E-09 54.4 3.7 47 112-161 48-95 (293)
114 1xj5_A Spermidine synthase 1; 97.2 0.00018 6.1E-09 56.5 3.4 43 120-162 118-161 (334)
115 3tma_A Methyltransferase; thum 97.2 0.00032 1.1E-08 55.2 4.8 52 110-162 192-245 (354)
116 2pt6_A Spermidine synthase; tr 97.2 0.00018 6E-09 56.2 3.3 41 122-162 116-157 (321)
117 3gnl_A Uncharacterized protein 97.2 0.00015 5.3E-09 54.5 2.7 41 122-162 21-62 (244)
118 1l3i_A Precorrin-6Y methyltran 97.2 0.00054 1.9E-08 48.2 5.5 48 112-162 24-72 (192)
119 2i7c_A Spermidine synthase; tr 97.2 0.0002 6.8E-09 54.8 3.2 42 121-162 77-119 (283)
120 3lpm_A Putative methyltransfer 97.2 0.00036 1.2E-08 52.4 4.7 42 120-162 46-89 (259)
121 1inl_A Spermidine synthase; be 97.2 0.0002 6.8E-09 55.2 3.2 41 122-162 90-131 (296)
122 3dou_A Ribosomal RNA large sub 97.2 0.00057 1.9E-08 49.2 5.5 45 109-155 12-56 (191)
123 3tr6_A O-methyltransferase; ce 97.2 0.00029 9.9E-09 51.5 3.9 41 122-162 64-106 (225)
124 1uir_A Polyamine aminopropyltr 97.2 0.00021 7.2E-09 55.5 3.3 42 121-162 76-118 (314)
125 2o07_A Spermidine synthase; st 97.2 0.00021 7E-09 55.4 3.2 43 120-162 93-136 (304)
126 3i9f_A Putative type 11 methyl 97.2 0.00011 3.6E-09 51.4 1.5 48 112-162 8-56 (170)
127 3hnr_A Probable methyltransfer 97.2 0.00031 1.1E-08 51.0 4.0 47 113-162 37-84 (220)
128 3ftd_A Dimethyladenosine trans 97.2 0.00047 1.6E-08 51.9 5.1 50 111-162 21-71 (249)
129 1ws6_A Methyltransferase; stru 97.2 0.00027 9.3E-09 49.0 3.5 39 122-162 41-80 (171)
130 3lec_A NADB-rossmann superfami 97.2 0.00018 6.3E-09 53.6 2.7 42 121-162 20-62 (230)
131 1mjf_A Spermidine synthase; sp 97.2 0.00021 7.2E-09 54.6 3.2 40 122-162 75-115 (281)
132 1ej0_A FTSJ; methyltransferase 97.2 0.0013 4.4E-08 45.4 7.0 45 112-156 12-57 (180)
133 2b2c_A Spermidine synthase; be 97.2 0.00024 8.1E-09 55.4 3.4 41 122-162 108-149 (314)
134 1wzn_A SAM-dependent methyltra 97.2 0.00066 2.3E-08 50.3 5.7 48 112-162 32-80 (252)
135 3lbf_A Protein-L-isoaspartate 97.1 0.00083 2.9E-08 48.4 6.1 48 112-162 68-116 (210)
136 2hnk_A SAM-dependent O-methylt 97.1 0.00031 1E-08 52.1 3.7 42 121-162 59-102 (239)
137 2nxc_A L11 mtase, ribosomal pr 97.1 0.00044 1.5E-08 51.9 4.6 40 121-162 119-159 (254)
138 3c3p_A Methyltransferase; NP_9 97.1 0.00031 1.1E-08 50.9 3.6 41 122-162 56-98 (210)
139 2cmg_A Spermidine synthase; tr 97.1 0.00041 1.4E-08 52.6 4.4 42 121-164 71-113 (262)
140 2y1w_A Histone-arginine methyl 97.1 0.00054 1.9E-08 53.9 5.2 48 112-161 41-88 (348)
141 3ocj_A Putative exported prote 97.1 0.00015 5.3E-09 55.7 1.9 43 120-162 116-160 (305)
142 1qam_A ERMC' methyltransferase 97.1 0.00064 2.2E-08 50.8 5.3 48 111-161 20-68 (244)
143 2p7i_A Hypothetical protein; p 97.1 0.00032 1.1E-08 51.5 3.5 38 122-161 42-80 (250)
144 3g2m_A PCZA361.24; SAM-depende 97.1 0.00044 1.5E-08 52.9 4.3 49 110-162 72-121 (299)
145 3e23_A Uncharacterized protein 97.1 0.00069 2.3E-08 48.9 5.1 41 120-162 41-82 (211)
146 3uzu_A Ribosomal RNA small sub 97.1 0.00041 1.4E-08 53.2 4.0 48 112-160 33-83 (279)
147 2b25_A Hypothetical protein; s 97.1 0.00085 2.9E-08 52.3 5.8 50 112-162 96-147 (336)
148 1dl5_A Protein-L-isoaspartate 97.1 0.00082 2.8E-08 52.1 5.7 50 112-162 66-117 (317)
149 3dr5_A Putative O-methyltransf 97.1 0.00086 2.9E-08 49.4 5.5 40 123-162 57-98 (221)
150 2bm8_A Cephalosporin hydroxyla 97.1 0.00036 1.2E-08 51.9 3.5 39 124-162 83-126 (236)
151 3c3y_A Pfomt, O-methyltransfer 97.1 0.00041 1.4E-08 51.5 3.7 42 121-162 69-112 (237)
152 2aot_A HMT, histamine N-methyl 97.1 0.0016 5.4E-08 49.7 7.1 38 123-160 53-97 (292)
153 3u81_A Catechol O-methyltransf 97.0 0.00048 1.6E-08 50.4 3.9 42 121-162 57-100 (221)
154 1nt2_A Fibrillarin-like PRE-rR 97.0 0.00084 2.9E-08 49.0 5.2 36 120-155 55-90 (210)
155 3grz_A L11 mtase, ribosomal pr 97.0 0.00064 2.2E-08 48.9 4.4 41 121-162 59-100 (205)
156 3ofk_A Nodulation protein S; N 97.0 0.00014 4.7E-09 52.8 0.9 44 116-162 46-90 (216)
157 1vbf_A 231AA long hypothetical 97.0 0.0011 3.9E-08 48.4 5.8 48 112-162 61-109 (231)
158 3d2l_A SAM-dependent methyltra 97.0 0.00096 3.3E-08 49.0 5.3 37 123-162 34-71 (243)
159 3q87_B N6 adenine specific DNA 97.0 0.00075 2.6E-08 47.4 4.5 35 123-160 24-59 (170)
160 4e2x_A TCAB9; kijanose, tetron 97.0 0.00086 3E-08 53.7 5.3 51 110-163 96-147 (416)
161 3bxo_A N,N-dimethyltransferase 97.0 0.00049 1.7E-08 50.4 3.5 40 121-162 39-79 (239)
162 1y8c_A S-adenosylmethionine-de 97.0 0.0011 3.7E-08 48.6 5.3 39 122-162 37-76 (246)
163 4htf_A S-adenosylmethionine-de 97.0 0.0021 7.3E-08 48.6 7.0 47 112-162 60-107 (285)
164 1zx0_A Guanidinoacetate N-meth 97.0 0.00052 1.8E-08 50.7 3.5 41 121-162 59-100 (236)
165 3sm3_A SAM-dependent methyltra 97.0 0.00069 2.4E-08 49.4 4.1 40 121-162 29-69 (235)
166 2pxx_A Uncharacterized protein 97.0 0.00055 1.9E-08 49.2 3.5 41 121-162 41-82 (215)
167 1zq9_A Probable dimethyladenos 96.9 0.0011 3.6E-08 50.8 5.2 48 111-161 18-66 (285)
168 4fsd_A Arsenic methyltransfera 96.9 0.0005 1.7E-08 54.7 3.4 41 122-162 83-125 (383)
169 1p91_A Ribosomal RNA large sub 96.9 0.00058 2E-08 51.2 3.6 41 121-161 84-125 (269)
170 3cgg_A SAM-dependent methyltra 96.9 0.00047 1.6E-08 48.7 2.9 46 112-161 38-84 (195)
171 1sui_A Caffeoyl-COA O-methyltr 96.9 0.00067 2.3E-08 50.8 3.9 42 121-162 78-121 (247)
172 2pbf_A Protein-L-isoaspartate 96.9 0.0017 5.8E-08 47.4 6.0 43 120-162 78-126 (227)
173 3a27_A TYW2, uncharacterized p 96.9 0.00061 2.1E-08 51.7 3.7 43 120-162 117-160 (272)
174 1g6q_1 HnRNP arginine N-methyl 96.9 0.0011 3.9E-08 51.6 5.2 39 122-161 38-76 (328)
175 3m70_A Tellurite resistance pr 96.9 0.00075 2.6E-08 51.1 4.1 47 113-162 112-159 (286)
176 2ipx_A RRNA 2'-O-methyltransfe 96.9 0.001 3.4E-08 49.0 4.6 36 120-155 75-111 (233)
177 3r3h_A O-methyltransferase, SA 96.9 0.00044 1.5E-08 51.7 2.6 40 122-161 60-101 (242)
178 3bgv_A MRNA CAP guanine-N7 met 96.9 0.0027 9.1E-08 48.8 7.1 40 121-161 33-73 (313)
179 3bzb_A Uncharacterized protein 96.9 0.0012 4.2E-08 50.2 5.1 42 120-162 77-120 (281)
180 2fyt_A Protein arginine N-meth 96.9 0.0012 4.3E-08 51.7 5.2 49 112-162 55-103 (340)
181 3p9n_A Possible methyltransfer 96.9 0.00092 3.2E-08 47.5 4.0 40 122-162 44-84 (189)
182 3giw_A Protein of unknown func 96.8 0.0026 8.8E-08 48.6 6.6 42 121-162 77-122 (277)
183 2yvl_A TRMI protein, hypotheti 96.8 0.0019 6.4E-08 47.6 5.7 48 112-162 82-130 (248)
184 1ne2_A Hypothetical protein TA 96.8 0.0012 4.3E-08 47.2 4.6 42 120-162 49-91 (200)
185 3opn_A Putative hemolysin; str 96.8 0.0028 9.4E-08 47.1 6.6 41 112-154 27-68 (232)
186 3tqs_A Ribosomal RNA small sub 96.8 0.00096 3.3E-08 50.4 4.1 48 111-161 19-67 (255)
187 3h2b_A SAM-dependent methyltra 96.8 0.00079 2.7E-08 48.2 3.3 38 123-162 42-80 (203)
188 2qm3_A Predicted methyltransfe 96.8 0.00077 2.6E-08 53.5 3.5 40 122-162 172-212 (373)
189 1yub_A Ermam, rRNA methyltrans 96.8 0.00068 2.3E-08 50.5 3.0 49 111-162 19-68 (245)
190 3l8d_A Methyltransferase; stru 96.8 0.0012 4.1E-08 48.5 4.3 41 121-163 52-93 (242)
191 3cbg_A O-methyltransferase; cy 96.8 0.001 3.6E-08 49.1 3.9 41 122-162 72-114 (232)
192 2avn_A Ubiquinone/menaquinone 96.8 0.0032 1.1E-07 47.0 6.7 39 122-162 54-93 (260)
193 3m33_A Uncharacterized protein 96.8 0.00095 3.2E-08 48.9 3.6 40 121-162 47-87 (226)
194 2ex4_A Adrenal gland protein A 96.8 0.0007 2.4E-08 50.0 2.8 40 122-162 79-119 (241)
195 3gru_A Dimethyladenosine trans 96.8 0.0021 7.1E-08 49.6 5.6 46 111-159 40-86 (295)
196 2ift_A Putative methylase HI07 96.8 0.00098 3.3E-08 48.1 3.5 38 124-162 55-93 (201)
197 3lcc_A Putative methyl chlorid 96.7 0.00091 3.1E-08 49.1 3.3 46 113-162 59-105 (235)
198 1qyr_A KSGA, high level kasuga 96.7 0.0017 5.9E-08 48.9 4.8 49 111-162 11-60 (252)
199 1wy7_A Hypothetical protein PH 96.7 0.0024 8.1E-08 45.9 5.3 42 120-162 47-89 (207)
200 2fpo_A Methylase YHHF; structu 96.7 0.0011 3.9E-08 47.8 3.5 38 124-162 56-94 (202)
201 4azs_A Methyltransferase WBDD; 96.7 0.00094 3.2E-08 56.0 3.5 39 122-162 66-105 (569)
202 1i1n_A Protein-L-isoaspartate 96.7 0.0013 4.6E-08 47.9 3.9 42 120-161 75-118 (226)
203 1g8a_A Fibrillarin-like PRE-rR 96.7 0.0016 5.3E-08 47.6 4.3 36 120-155 71-107 (227)
204 3evz_A Methyltransferase; NYSG 96.7 0.0013 4.4E-08 48.1 3.8 42 120-162 53-96 (230)
205 1ri5_A MRNA capping enzyme; me 96.7 0.0031 1.1E-07 47.6 6.0 41 121-162 63-104 (298)
206 2h1r_A Dimethyladenosine trans 96.7 0.0015 5.1E-08 50.3 4.1 48 111-161 32-80 (299)
207 2gb4_A Thiopurine S-methyltran 96.7 0.0012 4.2E-08 49.6 3.5 39 121-161 67-106 (252)
208 2frn_A Hypothetical protein PH 96.7 0.0013 4.4E-08 50.1 3.6 41 121-162 124-165 (278)
209 3q7e_A Protein arginine N-meth 96.7 0.0011 3.6E-08 52.2 3.3 40 122-162 66-105 (349)
210 3fut_A Dimethyladenosine trans 96.6 0.0031 1.1E-07 48.0 5.5 45 111-159 37-82 (271)
211 3gdh_A Trimethylguanosine synt 96.6 0.0013 4.5E-08 48.4 3.3 39 122-162 78-117 (241)
212 2ih2_A Modification methylase 96.6 0.0028 9.4E-08 50.6 5.4 49 112-161 30-80 (421)
213 3tm4_A TRNA (guanine N2-)-meth 96.6 0.0015 5.2E-08 51.8 3.8 43 120-162 215-258 (373)
214 2qfm_A Spermine synthase; sper 96.6 0.0016 5.6E-08 51.6 3.8 42 121-163 187-229 (364)
215 2kw5_A SLR1183 protein; struct 96.6 0.0014 4.8E-08 46.8 3.2 36 125-162 32-68 (202)
216 1af7_A Chemotaxis receptor met 96.5 0.0029 9.9E-08 48.3 4.9 40 123-162 106-154 (274)
217 1r18_A Protein-L-isoaspartate( 96.5 0.0025 8.5E-08 46.6 4.0 42 120-161 82-130 (227)
218 1vlm_A SAM-dependent methyltra 96.4 0.0065 2.2E-07 44.1 5.8 33 123-161 48-81 (219)
219 1ixk_A Methyltransferase; open 96.4 0.0028 9.7E-08 49.1 4.0 48 113-161 110-159 (315)
220 3htx_A HEN1; HEN1, small RNA m 96.4 0.0026 9E-08 55.6 4.1 42 121-162 720-763 (950)
221 3hp7_A Hemolysin, putative; st 96.3 0.0082 2.8E-07 46.2 6.4 41 112-154 75-116 (291)
222 2zfu_A Nucleomethylin, cerebra 96.3 0.0049 1.7E-07 44.4 4.9 38 113-155 58-95 (215)
223 3lcv_B Sisomicin-gentamicin re 96.2 0.0007 2.4E-08 51.5 -0.0 40 121-160 131-171 (281)
224 2p8j_A S-adenosylmethionine-de 96.2 0.0025 8.5E-08 45.7 2.8 40 121-161 22-62 (209)
225 2vdw_A Vaccinia virus capping 96.2 0.0082 2.8E-07 46.2 5.9 39 123-162 49-88 (302)
226 3frh_A 16S rRNA methylase; met 96.2 0.0044 1.5E-07 46.6 4.2 93 59-161 35-142 (253)
227 3r0q_C Probable protein argini 96.2 0.0053 1.8E-07 48.7 4.9 41 120-161 61-101 (376)
228 3ajd_A Putative methyltransfer 96.2 0.0061 2.1E-07 46.1 5.0 45 115-160 77-123 (274)
229 2g72_A Phenylethanolamine N-me 96.1 0.0022 7.5E-08 48.7 2.2 39 122-161 71-110 (289)
230 4df3_A Fibrillarin-like rRNA/T 96.1 0.008 2.7E-07 44.8 5.2 49 112-160 65-117 (233)
231 2oxt_A Nucleoside-2'-O-methylt 96.1 0.0067 2.3E-07 45.9 4.8 35 120-157 72-106 (265)
232 1uwv_A 23S rRNA (uracil-5-)-me 96.1 0.0077 2.6E-07 48.7 5.4 48 112-162 277-325 (433)
233 2wa2_A Non-structural protein 96.1 0.0064 2.2E-07 46.4 4.5 35 120-157 80-114 (276)
234 3ldu_A Putative methylase; str 95.9 0.0073 2.5E-07 48.2 4.4 32 112-144 186-217 (385)
235 3o4f_A Spermidine synthase; am 95.9 0.0066 2.3E-07 46.8 4.0 43 121-163 82-125 (294)
236 3k0b_A Predicted N6-adenine-sp 95.9 0.0085 2.9E-07 48.0 4.7 35 111-146 191-225 (393)
237 4hc4_A Protein arginine N-meth 95.8 0.0046 1.6E-07 49.3 2.9 38 124-162 85-122 (376)
238 2i62_A Nicotinamide N-methyltr 95.8 0.0013 4.5E-08 48.8 -0.2 40 121-161 55-95 (265)
239 1wg8_A Predicted S-adenosylmet 95.8 0.013 4.4E-07 44.9 5.1 50 110-162 11-61 (285)
240 2igt_A SAM dependent methyltra 95.8 0.0071 2.4E-07 47.3 3.7 39 122-162 153-192 (332)
241 3dmg_A Probable ribosomal RNA 95.7 0.0058 2E-07 48.8 3.0 39 122-162 233-272 (381)
242 2a14_A Indolethylamine N-methy 95.7 0.0035 1.2E-07 47.1 1.6 40 121-161 54-94 (263)
243 2r6z_A UPF0341 protein in RSP 95.6 0.0088 3E-07 45.1 3.7 41 113-156 75-115 (258)
244 2yxl_A PH0851 protein, 450AA l 95.6 0.0095 3.3E-07 48.4 4.0 46 113-159 251-298 (450)
245 2gs9_A Hypothetical protein TT 95.5 0.007 2.4E-07 43.4 2.7 42 113-161 29-72 (211)
246 3ldg_A Putative uncharacterize 95.5 0.015 5E-07 46.5 4.6 35 111-146 184-218 (384)
247 3id6_C Fibrillarin-like rRNA/T 95.3 0.025 8.6E-07 42.0 5.2 44 112-155 64-110 (232)
248 2dul_A N(2),N(2)-dimethylguano 95.2 0.014 5E-07 46.4 3.8 39 123-161 48-87 (378)
249 1rjd_A PPM1P, carboxy methyl t 95.2 0.036 1.2E-06 43.4 5.9 61 98-160 74-135 (334)
250 2f8l_A Hypothetical protein LM 95.1 0.0075 2.6E-07 47.1 1.8 41 121-161 129-175 (344)
251 2p41_A Type II methyltransfera 95.1 0.013 4.4E-07 45.3 3.1 32 120-154 80-111 (305)
252 3gcz_A Polyprotein; flavivirus 95.0 0.026 8.9E-07 43.1 4.4 47 107-154 76-122 (282)
253 1sqg_A SUN protein, FMU protei 95.0 0.043 1.5E-06 44.2 5.9 46 113-159 238-284 (429)
254 3b5i_A S-adenosyl-L-methionine 94.9 0.025 8.5E-07 45.0 4.2 34 123-156 53-101 (374)
255 3sso_A Methyltransferase; macr 94.6 0.033 1.1E-06 44.9 4.3 34 122-155 216-256 (419)
256 3k6r_A Putative transferase PH 94.6 0.021 7.3E-07 43.5 3.1 41 121-162 124-165 (278)
257 4dmg_A Putative uncharacterize 94.6 0.02 6.9E-07 45.8 3.1 38 123-162 215-253 (393)
258 3ll7_A Putative methyltransfer 94.6 0.022 7.6E-07 45.9 3.2 37 123-161 94-131 (410)
259 2oyr_A UPF0341 protein YHIQ; a 94.5 0.063 2.1E-06 40.5 5.4 43 111-156 76-120 (258)
260 3m6w_A RRNA methylase; rRNA me 94.5 0.049 1.7E-06 44.5 5.1 46 114-160 94-141 (464)
261 2as0_A Hypothetical protein PH 94.3 0.03 1E-06 44.6 3.5 40 122-162 217-257 (396)
262 2yx1_A Hypothetical protein MJ 94.3 0.027 9.1E-07 43.9 3.1 39 121-162 194-233 (336)
263 1wxx_A TT1595, hypothetical pr 94.3 0.023 7.9E-07 45.1 2.7 39 122-162 209-248 (382)
264 3c6k_A Spermine synthase; sper 94.3 0.04 1.4E-06 43.9 4.0 41 122-163 205-246 (381)
265 2b78_A Hypothetical protein SM 94.2 0.028 9.5E-07 44.7 3.1 40 122-162 212-252 (385)
266 3evf_A RNA-directed RNA polyme 94.2 0.054 1.8E-06 41.2 4.5 38 111-149 64-101 (277)
267 2jjq_A Uncharacterized RNA met 94.2 0.041 1.4E-06 44.5 4.0 39 122-162 290-329 (425)
268 3c0k_A UPF0064 protein YCCW; P 94.1 0.032 1.1E-06 44.5 3.3 40 122-162 220-260 (396)
269 2okc_A Type I restriction enzy 94.1 0.032 1.1E-06 45.2 3.4 50 111-161 161-224 (445)
270 3bt7_A TRNA (uracil-5-)-methyl 94.1 0.096 3.3E-06 41.3 6.0 46 113-162 206-252 (369)
271 3v97_A Ribosomal RNA large sub 93.8 0.064 2.2E-06 46.1 4.8 32 111-143 180-211 (703)
272 2efj_A 3,7-dimethylxanthine me 93.7 0.046 1.6E-06 43.6 3.4 33 123-155 53-102 (384)
273 3ua3_A Protein arginine N-meth 93.5 0.17 5.9E-06 43.5 6.7 51 82-139 376-426 (745)
274 4gqb_A Protein arginine N-meth 93.4 0.095 3.3E-06 44.5 5.0 66 82-154 321-393 (637)
275 3tka_A Ribosomal RNA small sub 93.3 0.16 5.6E-06 39.8 5.9 51 111-162 47-99 (347)
276 2zig_A TTHA0409, putative modi 93.1 0.13 4.5E-06 39.2 5.1 46 112-161 227-273 (297)
277 3m4x_A NOL1/NOP2/SUN family pr 93.0 0.096 3.3E-06 42.7 4.4 46 113-159 97-144 (456)
278 2b9e_A NOL1/NOP2/SUN domain fa 92.3 0.2 6.7E-06 38.7 5.1 44 115-159 96-141 (309)
279 3p8z_A Mtase, non-structural p 91.9 0.2 6.8E-06 37.5 4.5 46 109-155 66-111 (267)
280 3v97_A Ribosomal RNA large sub 91.4 0.14 4.9E-06 43.9 3.8 39 123-162 540-579 (703)
281 2frx_A Hypothetical protein YE 91.0 0.47 1.6E-05 38.9 6.2 38 122-159 117-156 (479)
282 4auk_A Ribosomal RNA large sub 90.9 0.11 3.7E-06 41.3 2.3 34 120-155 209-242 (375)
283 3eld_A Methyltransferase; flav 90.8 0.32 1.1E-05 37.4 4.8 46 108-154 68-113 (300)
284 3lkz_A Non-structural protein 90.8 0.23 7.7E-06 38.3 3.9 45 109-154 82-126 (321)
285 1m6e_X S-adenosyl-L-methionnin 90.8 0.1 3.5E-06 41.2 2.1 36 121-156 50-101 (359)
286 3iht_A S-adenosyl-L-methionine 90.0 2.7 9.1E-05 29.3 8.3 58 94-154 15-72 (174)
287 2uyo_A Hypothetical protein ML 89.5 0.82 2.8E-05 35.2 6.2 60 98-161 80-140 (310)
288 3axs_A Probable N(2),N(2)-dime 88.9 0.3 1E-05 39.0 3.4 40 123-162 53-94 (392)
289 2k4m_A TR8_protein, UPF0146 pr 88.8 0.36 1.2E-05 33.4 3.2 31 123-154 36-67 (153)
290 2ar0_A M.ecoki, type I restric 88.1 0.22 7.7E-06 41.4 2.2 49 112-161 160-227 (541)
291 1zkd_A DUF185; NESG, RPR58, st 88.0 1.2 4.2E-05 35.4 6.4 63 90-157 53-122 (387)
292 1i4w_A Mitochondrial replicati 87.9 0.77 2.6E-05 36.1 5.1 32 123-154 59-90 (353)
293 3s1s_A Restriction endonucleas 87.9 0.37 1.3E-05 42.2 3.5 42 120-161 319-364 (878)
294 2xyq_A Putative 2'-O-methyl tr 87.6 0.6 2E-05 35.7 4.2 34 120-155 61-101 (290)
295 2py6_A Methyltransferase FKBM; 86.9 0.86 2.9E-05 36.4 5.0 39 121-159 225-266 (409)
296 3khk_A Type I restriction-modi 84.7 0.69 2.4E-05 38.5 3.5 48 112-161 236-299 (544)
297 3iei_A Leucine carboxyl methyl 83.2 1.7 5.6E-05 33.9 4.9 63 97-160 65-129 (334)
298 1g60_A Adenine-specific methyl 82.7 2.1 7.3E-05 31.7 5.2 46 112-161 204-250 (260)
299 2px2_A Genome polyprotein [con 82.5 1.1 3.6E-05 33.9 3.4 33 110-143 62-94 (269)
300 2qy6_A UPF0209 protein YFCK; s 80.8 1.2 4.3E-05 33.2 3.3 33 122-154 60-104 (257)
301 3lkd_A Type I restriction-modi 79.8 0.76 2.6E-05 38.2 2.0 40 122-161 221-264 (542)
302 4f3n_A Uncharacterized ACR, CO 75.2 2.7 9.1E-05 34.0 3.8 57 90-154 113-174 (432)
303 3bed_A PTS system, IIA compone 63.0 3.9 0.00013 27.5 2.1 50 112-162 54-105 (142)
304 3ct6_A PTS-dependent dihydroxy 60.3 4.5 0.00015 27.0 1.9 43 113-158 52-94 (131)
305 3fpz_A Thiazole biosynthetic e 59.7 7.8 0.00027 29.3 3.5 30 125-154 67-98 (326)
306 4dyq_A Gene 1 protein; GP1, oc 59.2 12 0.00042 24.9 4.1 36 82-117 44-79 (140)
307 1pdo_A Mannose permease; phosp 56.1 6.1 0.00021 26.2 2.1 49 113-161 51-101 (135)
308 3c4n_A Uncharacterized protein 55.5 9.7 0.00033 29.8 3.5 32 124-155 37-70 (405)
309 2zwa_A Leucine carboxyl methyl 54.6 31 0.001 29.2 6.6 39 122-160 107-153 (695)
310 3mag_A VP39; methylated adenin 53.1 7.4 0.00025 29.8 2.3 32 123-154 61-96 (307)
311 1u6z_A Exopolyphosphatase; alp 52.3 13 0.00043 30.6 3.8 24 112-136 128-151 (513)
312 3mdq_A Exopolyphosphatase; str 51.8 14 0.00049 28.1 3.8 22 112-134 121-143 (315)
313 1m6i_A Programmed cell death p 49.0 15 0.00053 29.6 3.8 33 122-154 10-44 (493)
314 3he8_A Ribose-5-phosphate isom 48.7 7.4 0.00025 26.6 1.5 37 129-165 63-99 (149)
315 2vvp_A Ribose-5-phosphate isom 48.7 8.9 0.00031 26.6 2.0 37 129-165 67-103 (162)
316 3s5p_A Ribose 5-phosphate isom 47.4 8.2 0.00028 26.9 1.6 37 129-165 84-120 (166)
317 1o1x_A Ribose-5-phosphate isom 46.7 9.1 0.00031 26.4 1.7 37 129-165 75-111 (155)
318 3ph3_A Ribose-5-phosphate isom 46.2 7.7 0.00026 27.1 1.3 37 129-165 83-119 (169)
319 3cb2_A Gamma-1-tubulin, tubuli 45.2 63 0.0022 26.3 6.8 37 112-148 124-165 (475)
320 2ppw_A Conserved domain protei 42.9 8 0.00027 28.2 1.0 36 129-164 73-108 (216)
321 3ics_A Coenzyme A-disulfide re 42.8 23 0.00078 29.2 3.9 33 123-155 36-70 (588)
322 3ono_A Ribose/galactose isomer 42.8 8.9 0.0003 27.9 1.3 36 129-164 72-107 (214)
323 3ufb_A Type I restriction-modi 42.6 33 0.0011 28.2 4.8 31 112-143 208-238 (530)
324 3lfh_A Manxa, phosphotransfera 41.5 15 0.00053 24.7 2.3 49 113-162 53-104 (144)
325 3k7p_A Ribose 5-phosphate isom 41.4 11 0.00038 26.6 1.5 37 129-165 87-123 (179)
326 2xdo_A TETX2 protein; tetracyc 41.1 28 0.00095 26.9 4.0 32 124-155 27-58 (398)
327 3c5y_A Ribose/galactose isomer 40.6 10 0.00035 27.9 1.3 36 129-164 89-124 (231)
328 3ab1_A Ferredoxin--NADP reduct 40.5 19 0.00066 27.2 3.0 31 124-154 15-45 (360)
329 2e4g_A Tryptophan halogenase; 40.2 20 0.00067 29.4 3.1 34 123-156 25-61 (550)
330 2vvr_A Ribose-5-phosphate isom 39.5 16 0.00056 24.9 2.1 35 129-163 64-98 (149)
331 3sgw_A Ribose 5-phosphate isom 39.0 13 0.00044 26.4 1.5 37 129-165 95-131 (184)
332 3mtq_A Putative phosphoenolpyr 38.8 17 0.00059 24.9 2.2 51 112-162 69-120 (159)
333 4g6h_A Rotenone-insensitive NA 38.4 25 0.00086 28.5 3.5 32 123-154 42-73 (502)
334 2hqm_A GR, grase, glutathione 37.5 21 0.00073 28.6 2.9 30 125-154 13-42 (479)
335 3ryc_A Tubulin alpha chain; al 37.1 28 0.00095 28.2 3.5 44 112-155 124-175 (451)
336 2wk1_A NOVP; transferase, O-me 36.7 34 0.0012 25.7 3.7 32 122-153 106-142 (282)
337 3hi0_A Putative exopolyphospha 36.4 27 0.00092 28.6 3.4 21 112-134 132-152 (508)
338 1r7j_A Conserved hypothetical 35.4 5 0.00017 25.0 -1.0 28 2-38 41-68 (95)
339 1t0c_A Insulin; type I beta-tu 35.1 5.4 0.00018 18.8 -0.6 9 127-135 10-18 (31)
340 3f8d_A Thioredoxin reductase ( 34.9 27 0.00091 25.6 2.9 31 124-154 16-46 (323)
341 3ryc_B Tubulin beta chain; alp 34.9 31 0.0011 27.9 3.4 45 112-156 122-174 (445)
342 3rp8_A Flavoprotein monooxygen 34.3 29 0.001 26.8 3.2 32 124-155 24-55 (407)
343 2bto_A Tubulin btuba; bacteria 34.1 55 0.0019 26.6 4.8 36 112-147 126-166 (473)
344 3alj_A 2-methyl-3-hydroxypyrid 34.0 31 0.0011 26.4 3.2 31 124-154 12-42 (379)
345 3itj_A Thioredoxin reductase 1 33.7 23 0.00079 26.2 2.4 32 123-154 22-53 (338)
346 3jsk_A Cypbp37 protein; octame 33.3 36 0.0012 26.4 3.4 31 125-155 81-113 (344)
347 1t6c_A Exopolyphosphatase; alp 33.2 32 0.0011 26.2 3.1 15 122-136 138-152 (315)
348 3cty_A Thioredoxin reductase; 32.8 30 0.001 25.6 2.9 32 124-155 17-48 (319)
349 1vpt_A VP39; RNA CAP, poly(A) 32.6 24 0.00081 27.4 2.2 30 124-153 77-110 (348)
350 2bcg_G Secretory pathway GDP d 32.3 35 0.0012 27.1 3.3 31 124-154 12-42 (453)
351 2btq_B Tubulin btubb; structur 32.2 44 0.0015 26.7 3.9 45 112-156 123-175 (426)
352 4ebb_A Dipeptidyl peptidase 2; 32.0 82 0.0028 25.3 5.5 35 112-148 118-153 (472)
353 3cgb_A Pyridine nucleotide-dis 31.3 48 0.0016 26.5 4.0 31 124-154 37-69 (480)
354 2kvo_A Photosystem II reaction 31.2 15 0.00052 24.0 0.8 20 88-107 83-102 (120)
355 3k13_A 5-methyltetrahydrofolat 31.2 42 0.0014 25.6 3.4 15 121-135 48-62 (300)
356 4em8_A Ribose 5-phosphate isom 31.1 25 0.00084 24.0 1.9 36 129-164 69-104 (148)
357 3ihm_A Styrene monooxygenase A 30.9 28 0.00097 27.4 2.6 31 124-154 23-53 (430)
358 3cer_A Possible exopolyphospha 30.8 30 0.001 26.7 2.6 16 122-137 146-161 (343)
359 1boo_A Protein (N-4 cytosine-s 30.8 1.1E+02 0.0038 23.1 5.9 41 112-156 244-284 (323)
360 3o0h_A Glutathione reductase; 30.7 30 0.001 27.6 2.8 30 125-154 28-57 (484)
361 3urh_A Dihydrolipoyl dehydroge 30.7 30 0.001 27.7 2.8 30 125-154 27-56 (491)
362 1ps9_A 2,4-dienoyl-COA reducta 30.5 53 0.0018 27.6 4.3 31 124-154 374-404 (671)
363 1ryi_A Glycine oxidase; flavop 30.4 33 0.0011 26.0 2.8 32 124-155 18-49 (382)
364 1rp0_A ARA6, thiazole biosynth 30.1 46 0.0016 24.5 3.5 31 125-155 41-72 (284)
365 4b1b_A TRXR, thioredoxin reduc 29.2 44 0.0015 27.5 3.5 28 126-153 45-72 (542)
366 2dkh_A 3-hydroxybenzoate hydro 28.5 42 0.0014 28.1 3.3 31 124-154 33-64 (639)
367 3qfa_A Thioredoxin reductase 1 28.4 36 0.0012 27.6 2.8 31 124-154 33-63 (519)
368 2qa1_A PGAE, polyketide oxygen 27.3 46 0.0016 26.9 3.3 34 121-154 9-42 (500)
369 3b48_A Uncharacterized protein 27.2 11 0.00039 25.0 -0.3 43 113-157 57-103 (135)
370 2fsj_A Hypothetical protein TA 26.8 22 0.00075 27.3 1.2 11 124-134 192-202 (346)
371 1f6y_A 5-methyltetrahydrofolat 26.6 47 0.0016 24.6 3.0 12 123-134 38-49 (262)
372 2qa2_A CABE, polyketide oxygen 26.6 43 0.0015 27.0 3.0 33 122-154 11-43 (499)
373 2gjc_A Thiazole biosynthetic e 26.6 56 0.0019 25.1 3.5 30 125-154 67-98 (326)
374 1sez_A Protoporphyrinogen oxid 26.5 64 0.0022 25.6 4.0 33 123-155 13-45 (504)
375 2ivd_A PPO, PPOX, protoporphyr 26.4 53 0.0018 25.8 3.5 35 121-155 14-48 (478)
376 1w5f_A Cell division protein F 26.2 28 0.00095 27.2 1.7 36 123-158 109-148 (353)
377 3b73_A PHIH1 repressor-like pr 26.0 11 0.00039 24.2 -0.5 30 2-39 50-79 (111)
378 3v3t_A Cell division GTPase FT 25.5 1.1E+02 0.0036 24.1 4.8 44 112-155 81-130 (360)
379 2r75_1 Cell division protein F 25.3 29 0.001 26.9 1.7 34 124-157 96-133 (338)
380 3dk9_A Grase, GR, glutathione 25.3 43 0.0015 26.6 2.8 32 124-155 21-52 (478)
381 2bry_A NEDD9 interacting prote 25.1 53 0.0018 26.5 3.3 32 123-154 92-123 (497)
382 3cvo_A Methyltransferase-like 25.0 81 0.0028 22.4 3.9 38 121-161 29-67 (202)
383 4dxd_A Cell division protein F 24.9 30 0.001 27.5 1.7 35 123-157 105-143 (396)
384 4ap3_A Steroid monooxygenase; 24.7 48 0.0017 27.2 3.0 31 124-154 22-52 (549)
385 3ps9_A TRNA 5-methylaminomethy 24.6 69 0.0023 26.9 4.0 31 124-154 273-303 (676)
386 3v76_A Flavoprotein; structura 24.1 49 0.0017 26.1 2.8 30 125-154 29-58 (417)
387 4dvj_A Putative zinc-dependent 24.1 32 0.0011 26.4 1.7 41 122-162 171-214 (363)
388 2vxy_A FTSZ, cell division pro 24.0 34 0.0012 27.1 1.8 35 123-157 99-137 (382)
389 3aap_A Ectonucleoside triphosp 23.9 25 0.00085 27.4 1.0 15 124-138 142-156 (353)
390 3ces_A MNMG, tRNA uridine 5-ca 23.8 47 0.0016 28.2 2.8 31 124-154 29-59 (651)
391 2r0c_A REBC; flavin adenine di 23.5 51 0.0017 26.9 2.9 31 124-154 27-57 (549)
392 3pvc_A TRNA 5-methylaminomethy 23.4 62 0.0021 27.3 3.5 31 124-154 265-295 (689)
393 2bc0_A NADH oxidase; flavoprot 23.4 47 0.0016 26.6 2.6 32 124-155 36-70 (490)
394 1pqw_A Polyketide synthase; ro 23.3 1.4E+02 0.0049 20.1 5.0 35 120-155 36-72 (198)
395 4a5n_A Uncharacterized HTH-typ 23.3 29 0.00098 22.9 1.1 35 2-38 61-95 (131)
396 2c0c_A Zinc binding alcohol de 23.3 1.4E+02 0.0047 22.7 5.2 41 120-161 161-204 (362)
397 3i3l_A Alkylhalidase CMLS; fla 23.1 61 0.0021 27.0 3.3 32 124-155 24-55 (591)
398 2dph_A Formaldehyde dismutase; 23.0 1.5E+02 0.005 22.9 5.4 47 115-163 179-228 (398)
399 3da1_A Glycerol-3-phosphate de 22.9 66 0.0023 26.4 3.5 31 125-155 20-50 (561)
400 2x8g_A Thioredoxin glutathione 22.6 56 0.0019 26.9 3.0 32 123-154 107-138 (598)
401 3gx1_A LIN1832 protein; APC633 22.5 63 0.0022 21.1 2.7 49 112-161 53-103 (130)
402 2vdc_G Glutamate synthase [NAD 22.4 52 0.0018 26.3 2.7 32 123-154 122-153 (456)
403 4at0_A 3-ketosteroid-delta4-5a 22.3 55 0.0019 26.4 2.8 33 124-156 42-74 (510)
404 2h6e_A ADH-4, D-arabinose 1-de 22.3 60 0.0021 24.5 2.9 41 120-161 169-212 (344)
405 2g1u_A Hypothetical protein TM 21.8 1.7E+02 0.0058 18.9 5.2 38 124-162 20-59 (155)
406 1ofu_A FTSZ, cell division pro 21.8 38 0.0013 26.0 1.7 36 123-158 99-138 (320)
407 1eg2_A Modification methylase 21.6 1.8E+02 0.0062 21.9 5.5 41 112-156 234-274 (319)
408 3s2e_A Zinc-containing alcohol 21.3 1.6E+02 0.0056 21.9 5.3 42 120-162 164-207 (340)
409 2zxi_A TRNA uridine 5-carboxym 21.2 57 0.002 27.6 2.8 31 124-154 28-58 (637)
410 2gmh_A Electron transfer flavo 21.1 47 0.0016 27.5 2.2 31 125-155 37-73 (584)
411 2i0z_A NAD(FAD)-utilizing dehy 20.9 61 0.0021 25.5 2.8 30 125-154 28-57 (447)
412 3mt1_A Putative carboxynorsper 20.7 33 0.0011 26.6 1.1 12 124-135 191-202 (365)
413 2z30_B TK-subtilisin; thermoco 20.5 16 0.00055 20.8 -0.5 28 140-167 25-53 (65)
414 1y0p_A Fumarate reductase flav 20.3 62 0.0021 26.5 2.8 32 124-155 127-158 (571)
415 1o94_A Tmadh, trimethylamine d 20.3 84 0.0029 26.8 3.7 32 123-154 389-420 (729)
416 2jae_A L-amino acid oxidase; o 20.3 92 0.0031 24.6 3.8 33 122-154 10-42 (489)
417 3fmw_A Oxygenase; mithramycin, 20.3 66 0.0023 26.5 3.0 30 125-154 51-80 (570)
418 3h1q_A Ethanolamine utilizatio 20.2 39 0.0013 24.5 1.4 11 124-134 141-151 (272)
419 3i33_A Heat shock-related 70 k 20.1 35 0.0012 26.4 1.2 11 124-134 216-226 (404)
420 2a87_A TRXR, TR, thioredoxin r 20.0 44 0.0015 24.9 1.7 32 123-154 14-45 (335)
421 1z6n_A Hypothetical protein PA 20.0 2.1E+02 0.0071 19.2 6.3 80 82-163 12-102 (167)
No 1
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.95 E-value=3.6e-28 Score=194.47 Aligned_cols=166 Identities=47% Similarity=0.900 Sum_probs=142.2
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhcC
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAHN 80 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~g 80 (168)
+||+|+++|+|++....+++|..+++|++|+.++.|+.++.+.++.+++.+...+.+++.|.+|.+++|+|+++|+..+|
T Consensus 81 lLr~L~~~g~l~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~~~~~~~~g 160 (364)
T 3p9c_A 81 ILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYG 160 (364)
T ss_dssp HHHHHHHTTSEEEEEEECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCSCHHHHHHS
T ss_pred HHHHHHhCCCEEEeccccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCCChHHHhcC
Confidence 58999999999985210001111378999999999887654458999887765667789999999999999999999999
Q ss_pred CCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhh
Q 030988 81 AKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKD 160 (168)
Q Consensus 81 ~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~ 160 (168)
.++|+|+.++|+..+.|+++|...+....+.+++.++.++...+|||||||+|.++..+++++|+++++++|+|++++.
T Consensus 161 -~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 239 (364)
T 3p9c_A 161 -MSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISE 239 (364)
T ss_dssp -SCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTT
T ss_pred -CCHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHh
Confidence 8999999999999999999999988887788999997688889999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 030988 161 APSYQGI 167 (168)
Q Consensus 161 a~~~~~~ 167 (168)
++..++|
T Consensus 240 a~~~~~v 246 (364)
T 3p9c_A 240 APQFPGV 246 (364)
T ss_dssp CCCCTTE
T ss_pred hhhcCCe
Confidence 9876544
No 2
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.95 E-value=1.9e-28 Score=195.38 Aligned_cols=154 Identities=19% Similarity=0.298 Sum_probs=134.9
Q ss_pred CccccccCCcccceeecCCCCccccceecchhcccc-CCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhc
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYL-LPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAH 79 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~ 79 (168)
+||+|+++|+|++....+ +++|++|+.++.| .++++ .++.+++.+. .+..++.|.+|.+++++|+++|...+
T Consensus 63 lLr~L~~~gll~~~~~~~-----~~~y~~t~~s~~~l~~~~~-~~~~~~~~~~-~~~~~~~~~~L~~~vr~g~~~~~~~~ 135 (353)
T 4a6d_A 63 LLDICVSLKLLKVETRGG-----KAFYRNTELSSDYLTTVSP-TSQCSMLKYM-GRTSYRCWGHLADAVREGRNQYLETF 135 (353)
T ss_dssp HHHHHHHTTSEEEEEETT-----EEEEEECHHHHHHHSTTST-TCCHHHHHHH-HHTHHHHHTTHHHHHHHTSCCHHHHH
T ss_pred HHHHHHHCCCEEEeccCc-----cceeeCCHHHHHHhhcCCc-hHHHHHHHHh-CHHHHHHHHHHHHHHhcCCChhHHhc
Confidence 589999999998752111 5689999999875 44444 5888888765 45678899999999999999999988
Q ss_pred C--CCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHH
Q 030988 80 N--AKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 80 g--~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~v 157 (168)
| ..++|+++.++|+....|+++|...+...++.+++.|+ |+...+|||||||+|.++++++++||+++++++|+|+|
T Consensus 136 g~~~~~~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v 214 (353)
T 4a6d_A 136 GVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD-LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEV 214 (353)
T ss_dssp SCCCSSHHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHHSSC-GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHH
T ss_pred CCChHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHH
Confidence 8 46899999999999999999999998888889999999 99999999999999999999999999999999999999
Q ss_pred HhhCC
Q 030988 158 IKDAP 162 (168)
Q Consensus 158 i~~a~ 162 (168)
++.++
T Consensus 215 ~~~a~ 219 (353)
T 4a6d_A 215 VWTAK 219 (353)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.95 E-value=8.4e-28 Score=192.57 Aligned_cols=166 Identities=51% Similarity=0.884 Sum_probs=141.4
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhcC
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAHN 80 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~g 80 (168)
+||+|+++|+|++....+++|..+++|++|+.++.|+.+..+.++++++.+..++.++..|.+|.+++|+|+++|+..+|
T Consensus 83 lLr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~~~~~~~~g 162 (368)
T 3reo_A 83 VLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGGIPFNKAYG 162 (368)
T ss_dssp HHHHHHHTTSEEEEEEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCSCHHHHHSS
T ss_pred HHHHHHhCCCeEEecccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCCCHHHHHhC
Confidence 58999999999985110001111378999999999886654458999887765667788999999999999999999999
Q ss_pred CCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhh
Q 030988 81 AKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKD 160 (168)
Q Consensus 81 ~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~ 160 (168)
.++|+|+.++|+..+.|+++|...+....+.+++.++.|+...+|||||||+|.++..+++++|+++++++|+|++++.
T Consensus 163 -~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 241 (368)
T 3reo_A 163 -MNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQD 241 (368)
T ss_dssp -SCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTT
T ss_pred -CCHHHHHhhCHHHHHHHHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHh
Confidence 9999999999999999999999988887788888887678889999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 030988 161 APSYQGI 167 (168)
Q Consensus 161 a~~~~~~ 167 (168)
++..++|
T Consensus 242 a~~~~~v 248 (368)
T 3reo_A 242 APAFSGV 248 (368)
T ss_dssp CCCCTTE
T ss_pred hhhcCCC
Confidence 9876544
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.93 E-value=5.3e-26 Score=180.69 Aligned_cols=148 Identities=18% Similarity=0.198 Sum_probs=134.1
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhcC
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAHN 80 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~g 80 (168)
+||+|+++|+|++. +++|++|+.++.|+++++ .++.+++.+..++..++.|.+|++++|+|+++|+..+|
T Consensus 75 lLr~l~~~g~l~~~---------~~~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~g 144 (348)
T 3lst_A 75 VLRLLAVRDVVRES---------DGRFALTDKGAALRSDSP-VPARAGILMFTDTMFWTMSHRVASALGPERPAFADIFG 144 (348)
T ss_dssp HHHHHHHTTSEEEE---------TTEEEECTTTGGGSTTSS-SCSHHHHHHHTSHHHHHHHHTHHHHTCTTCCCHHHHHS
T ss_pred HHHHHHhCCCEEec---------CCEEecCHHHHHHhcCCC-ccHHHHHHHhcCHHHHHHHHHHHHHHhcCCChhhHHhC
Confidence 58999999999994 789999999999977654 47888887654555678999999999999999999999
Q ss_pred CCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhh
Q 030988 81 AKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKD 160 (168)
Q Consensus 81 ~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~ 160 (168)
.++|+|+.++|+..+.|.++|...+....+.+++.++ |+...+|||||||+|.++..+++++|+++++++|+|+++..
T Consensus 145 -~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 222 (348)
T 3lst_A 145 -SSLDAYFDGDAEVEALYYEGMETVSAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVAR 222 (348)
T ss_dssp -SCHHHHHTTCHHHHHHHHHHHHHHHHTTHHHHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTT
T ss_pred -CCHHHHHHhCHHHHHHHHHHHHHhhhhhHHHHHHhCC-ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhc
Confidence 7899999999999999999999988877788999999 99999999999999999999999999999999999999883
No 5
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.92 E-value=2.1e-25 Score=177.44 Aligned_cols=156 Identities=21% Similarity=0.383 Sum_probs=136.2
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHh-cCCchhHhhc
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLL-EGTLPFMKAH 79 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~-~g~~~~~~~~ 79 (168)
+||+|+++|+|++.+ .+ +++|++|+.++.|+++.+ .++.+++.+..++..++.|.+|+++++ +|+++|+..+
T Consensus 74 lLr~L~~~gll~~~~-~~-----~~~y~~t~~s~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~~~~~~~~ 146 (352)
T 1fp2_A 74 LMRYLAHNGFFEIIT-KE-----EESYALTVASELLVRGSD-LCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTL 146 (352)
T ss_dssp HHHHHHHTTSEEEEE-SS-----SEEEEECHHHHTTSTTSS-SCCHHHHHHHTCHHHHHGGGGHHHHHTCSSCCHHHHHH
T ss_pred HHHHHHhCCeEEEec-CC-----CCeEeCCHHHHHHhCCCC-ccHHHHHHHhcCchHHHHHHHHHHHHHhcCCChHHHHc
Confidence 489999999999851 01 589999999998887655 478898877655566789999999999 8999999989
Q ss_pred CCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHc--CCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHH
Q 030988 80 NAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIY--KGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 80 g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~--~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~v 157 (168)
| .++|+++.++|+..+.|+++|...+....+. ++.| + ++...+|||||||+|.++..+++++|+++++++|+|.+
T Consensus 147 g-~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~-~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~ 223 (352)
T 1fp2_A 147 G-SGFWDFLDKNPEYNTSFNDAMASDSKLINLA-LRDCDFV-FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQV 223 (352)
T ss_dssp S-SCHHHHHHHCHHHHHHHHHHHHHTHHHHHHH-HHTCHHH-HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHH
T ss_pred C-CCHHHHHHhChHHHHHHHHHHHhcchhhhhH-HHhcccc-cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHH
Confidence 8 8999999999999999999999988776667 8888 5 88889999999999999999999999999999999999
Q ss_pred HhhCCCCCC
Q 030988 158 IKDAPSYQG 166 (168)
Q Consensus 158 i~~a~~~~~ 166 (168)
++.++..++
T Consensus 224 ~~~a~~~~~ 232 (352)
T 1fp2_A 224 VENLSGSNN 232 (352)
T ss_dssp HTTCCCBTT
T ss_pred HhhcccCCC
Confidence 999887554
No 6
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.92 E-value=1.6e-25 Score=179.26 Aligned_cols=151 Identities=21% Similarity=0.373 Sum_probs=135.9
Q ss_pred CccccccCCcccceeecCCCCccccc-eecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhc
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRV-YGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAH 79 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~-y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~ 79 (168)
+||+|+++|+|++. + +++ |++|+.++.|.++.+ .++.+++.+...+..++.|.+|.+++++|+++|...+
T Consensus 91 lLr~L~~~g~l~~~----~----~~~~y~~t~~s~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~ 161 (369)
T 3gwz_A 91 LLRLLATVGVFDDL----G----HDDLFAQNALSAVLLPDPA-SPVATDARFQAAPWHWRAWEQLTHSVRTGEASFDVAN 161 (369)
T ss_dssp HHHHHHHTTSSEEC----S----STTEEECCHHHHTTSCCTT-CHHHHHHHHHHSHHHHHHHHTHHHHHHHSSCSHHHHH
T ss_pred HHHHHHhCCCEEEe----C----CCceEecCHHHHHHhcCCc-hhHHHHHHHcCCHHHHHHHHhHHHHHhCCCChhHhhc
Confidence 58999999999995 2 678 999999999876654 4788888776454567899999999999999999999
Q ss_pred CCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHh
Q 030988 80 NAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIK 159 (168)
Q Consensus 80 g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~ 159 (168)
| .++|+|+.++|+..+.|+++|...+....+.+++.++ ++...+|||||||+|.++..+++++|+++++++|+|.+++
T Consensus 162 g-~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~ 239 (369)
T 3gwz_A 162 G-TSFWQLTHEDPKARELFNRAMGSVSLTEAGQVAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAE 239 (369)
T ss_dssp S-SCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHH
T ss_pred C-CCHHHHHHhCHHHHHHHHHHHHHHHhhhHHHHHHhCC-CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHH
Confidence 8 7899999999999999999999998888889999999 9999999999999999999999999999999999999998
Q ss_pred hCC
Q 030988 160 DAP 162 (168)
Q Consensus 160 ~a~ 162 (168)
.++
T Consensus 240 ~a~ 242 (369)
T 3gwz_A 240 EAR 242 (369)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.92 E-value=1.3e-25 Score=177.20 Aligned_cols=151 Identities=20% Similarity=0.256 Sum_probs=133.7
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCcccc-ccCCcchHHHhcCCchhHhhc
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNV-DPWYHLKDCLLEGTLPFMKAH 79 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~~l~~g~~~~~~~~ 79 (168)
+||+|+++|++++. + +++|++|+.++.|..+.+ .++.+++.+...+..+ +.|.+|.+++++|+++|+..+
T Consensus 58 lLr~l~~~gl~~~~----~----~~~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 128 (332)
T 3i53_A 58 LLRHLVAVGLFTRD----G----QGVYGLTEFGEQLRDDHA-AGKRKWLDMNSAVGRGDLGFVELAHSIRTGQPAYPVRY 128 (332)
T ss_dssp HHHHHHHTTSEEEC----T----TSBEEECTTGGGGSTTCT-TCCHHHHCTTSHHHHHGGGGGGHHHHHHHSSCSHHHHH
T ss_pred HHHHHHhCCcEEec----C----CCeEEcCHhHHHHhcCCc-hhHHHHHHHcCCHhHHHHHHHHhHHHHhcCCCHHHHhh
Confidence 58999999999986 2 789999999999976654 4788888765333445 789999999999999999999
Q ss_pred CCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHh
Q 030988 80 NAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIK 159 (168)
Q Consensus 80 g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~ 159 (168)
| .++|+++.++|+..+.|.++|...+....+.+++.++ |+...+|||||||+|.++..+++++|+++++++|+|.+++
T Consensus 129 g-~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~ 206 (332)
T 3i53_A 129 G-TSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYD-WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPAS 206 (332)
T ss_dssp S-SCHHHHHHHCHHHHHHHHHHHHHHHHHHHTTGGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHH
T ss_pred C-CCHHHHHHhCHHHHHHHHHHHHHhHHhhHHHHHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHH
Confidence 8 7899999999999999999999988877778888898 9888999999999999999999999999999999999998
Q ss_pred hCC
Q 030988 160 DAP 162 (168)
Q Consensus 160 ~a~ 162 (168)
.++
T Consensus 207 ~a~ 209 (332)
T 3i53_A 207 AAH 209 (332)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 8
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.92 E-value=2.2e-25 Score=177.70 Aligned_cols=163 Identities=22% Similarity=0.401 Sum_probs=136.4
Q ss_pred CccccccCCcccceeec-CC-CCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcC--CchhH
Q 030988 1 MLQLLASCSFLTCNLVT-NK-DGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEG--TLPFM 76 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~-~~-~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g--~~~~~ 76 (168)
+||+|+++|+|++.... ++ +|..+++|++|+.++.|+++++ .++.+++.+..++.+++.|.+|++++|+| .++|+
T Consensus 68 lLr~L~~~gll~~~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~ 146 (358)
T 1zg3_A 68 FLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKP-TCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFE 146 (358)
T ss_dssp HHHHHHHTTSEEEEEECCSSSSCCCEEEEEECHHHHTTCTTST-TCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHH
T ss_pred HHHHHhhCCcEEEecccccccCCCCCCEEeCCHHHHHHhCCCC-ccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHH
Confidence 48999999999985100 00 0101379999999998887765 47899988765566788999999999999 78899
Q ss_pred hhcCCCchhHHhHhcHHHHH--HHHHHHHHhhHHHHHHHHHHc--CCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEc
Q 030988 77 KAHNAKNPFEYAMKAARRRN--LFNQSMHNHAALVMKKILEIY--KGFEEINQLVDVAGGLGANISLLVSKYPQIRGINF 152 (168)
Q Consensus 77 ~~~g~~~~~e~~~~~p~~~~--~f~~~m~~~~~~~~~~~~~~~--~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~ 152 (168)
..+| .++|+++.++|+..+ .|+++|...+.... .+++.| + |+...+|||||||+|.++..+++++|+++++++
T Consensus 147 ~~~g-~~~~~~~~~~p~~~~~~~f~~~m~~~~~~~~-~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~ 223 (358)
T 1zg3_A 147 CATG-ESFWDFLNKDSESSTLSMFQDAMASDSRMFK-LVLQENKRV-FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVF 223 (358)
T ss_dssp HHHS-SCHHHHHTSGGGHHHHHHHHHHHHHHHHTHH-HHHHHTHHH-HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEE
T ss_pred HHhC-CCHHHHHhcChhhhhHHHHHHHHhcccHHHH-HHHHhcchh-ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEe
Confidence 8888 889999999999999 99999999877666 788888 5 788899999999999999999999999999999
Q ss_pred cchHHHhhCCCCCCC
Q 030988 153 DLPHVIKDAPSYQGI 167 (168)
Q Consensus 153 DlP~vi~~a~~~~~~ 167 (168)
|+|.+++.++..++|
T Consensus 224 D~~~~~~~a~~~~~v 238 (358)
T 1zg3_A 224 DQPQVVGNLTGNENL 238 (358)
T ss_dssp ECHHHHSSCCCCSSE
T ss_pred ccHHHHhhcccCCCc
Confidence 999999998875543
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.92 E-value=3.9e-25 Score=177.12 Aligned_cols=166 Identities=44% Similarity=0.723 Sum_probs=125.9
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcC-CchhHhhc
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEG-TLPFMKAH 79 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g-~~~~~~~~ 79 (168)
+||+|+++|+|++....+++|..+++|++|+.++.|+++++..++++++.+..++.+++.|.+|++++++| +++|+..+
T Consensus 88 lLr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~ 167 (372)
T 1fp1_D 88 MLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVH 167 (372)
T ss_dssp HHHHHHHTTSEEEEEEECTTSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC--------
T ss_pred HHHHHhhCCceEecccccCCCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHh
Confidence 58999999999985100000100259999999998887654237888887765556678999999999999 88999888
Q ss_pred CCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHh
Q 030988 80 NAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIK 159 (168)
Q Consensus 80 g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~ 159 (168)
| .++|+++.++|+..+.|+++|...+....+.+++.++.++...+|||||||+|.++..+++++|+++++++|+|.+++
T Consensus 168 g-~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~ 246 (372)
T 1fp1_D 168 G-VTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIE 246 (372)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHT
T ss_pred C-CCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHH
Confidence 8 889999999999999999999998887778899999658888999999999999999999999999999999999999
Q ss_pred hCCCCCCC
Q 030988 160 DAPSYQGI 167 (168)
Q Consensus 160 ~a~~~~~~ 167 (168)
.++..++|
T Consensus 247 ~a~~~~~v 254 (372)
T 1fp1_D 247 NAPPLSGI 254 (372)
T ss_dssp TCCCCTTE
T ss_pred hhhhcCCC
Confidence 99876543
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.91 E-value=2.8e-24 Score=169.50 Aligned_cols=147 Identities=21% Similarity=0.341 Sum_probs=130.5
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhcC
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAHN 80 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~g 80 (168)
+||+|+++|+|++. + +++|++|+.++.|+ +++ .++.+++.+..++. ++.|.+|++++++|+++|+..+|
T Consensus 61 ~Lr~L~~~g~l~~~----~----~~~y~~t~~s~~l~-~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~g 129 (334)
T 2ip2_A 61 LMRLLVAFEIFQGD----T----RDGYANTPTSHLLR-DVE-GSFRDMVLFYGEEF-HAAWTPACEALLSGTPGFELAFG 129 (334)
T ss_dssp HHHHHHHTTSEEEE----T----TTEEEECHHHHTTS-SST-TCSHHHHHHHTTHH-HHHTTTHHHHHHHCCCHHHHHHS
T ss_pred HHHHHHhCCceEec----C----CCeEecCHHHHHHh-CCC-ccHHHHHHHhcCch-hhHHHHHHHHHhcCCChhhhhcC
Confidence 48999999999986 2 68999999999888 544 47888887764443 38999999999999999998888
Q ss_pred CCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhh
Q 030988 81 AKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKD 160 (168)
Q Consensus 81 ~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~ 160 (168)
.++|+++.++|+..+.|+++| ..+....+.+++.++ +++ .+|||||||+|.++..+++++|+++++++|+|.+++.
T Consensus 130 -~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~~~~~-~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 205 (334)
T 2ip2_A 130 -EDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIPRLLD-FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGV 205 (334)
T ss_dssp -SCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHHHHSC-CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHH
T ss_pred -CCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHHHhCC-CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHH
Confidence 889999999999999999999 888777788999998 988 9999999999999999999999999999999988876
Q ss_pred CC
Q 030988 161 AP 162 (168)
Q Consensus 161 a~ 162 (168)
++
T Consensus 206 a~ 207 (334)
T 2ip2_A 206 AR 207 (334)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 11
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.87 E-value=6.5e-23 Score=163.83 Aligned_cols=151 Identities=15% Similarity=0.222 Sum_probs=131.4
Q ss_pred CccccccCCcccceeecCCCCcccc--ceecchhccccCCCCCCCChHHHHHhhcCcccc-ccCCcchHHHhcCCchhHh
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFR--VYGLASVGRYLLPNEDGVSLAPIFLLSQENVNV-DPWYHLKDCLLEGTLPFMK 77 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~--~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~~l~~g~~~~~~ 77 (168)
+||+|++.|+|++. + ++ +|++|+.++.|+.+.+ .++..++.+...+..+ ..|.+|.+++++|+++|+.
T Consensus 69 ~Lr~L~~~Gll~~~----~----~~~~~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 139 (374)
T 1qzz_A 69 LVRHLTVVGVLEGG----E----KQGRPLRPTRLGMLLADGHP-AQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPAYAG 139 (374)
T ss_dssp HHHHHHHTTSEECC----C----C-CCCCEECTTGGGGSTTCT-TCHHHHHCTTSHHHHHHGGGGGHHHHHHHSCCSHHH
T ss_pred HHHHHhhCCCEEEe----C----CCCeEEEEChHHHhhcCCCc-ccHHHHHHHcCChhhHHHHHHHHHHHHhcCCChhhh
Confidence 48999999999985 1 56 9999999988887655 4788888765333456 7999999999999999998
Q ss_pred hcCCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHH
Q 030988 78 AHNAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 78 ~~g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~v 157 (168)
.+| .++|+++.++|+..+.|+++|........+.+++.++ ++...+|||||||+|.++..+++++|+++++.+|+|.+
T Consensus 140 ~~g-~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~ 217 (374)
T 1qzz_A 140 RYG-RPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGP 217 (374)
T ss_dssp HHS-SCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHH
T ss_pred hhC-CCHHHHHhhChHHHHHHHHHHHHhhHhHHHHHHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHH
Confidence 888 8999999999999999999999877666678899998 88889999999999999999999999999999999988
Q ss_pred HhhCC
Q 030988 158 IKDAP 162 (168)
Q Consensus 158 i~~a~ 162 (168)
++.++
T Consensus 218 ~~~a~ 222 (374)
T 1qzz_A 218 AERAR 222 (374)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 12
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.87 E-value=1.2e-22 Score=161.67 Aligned_cols=151 Identities=15% Similarity=0.237 Sum_probs=132.2
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCcc-ccccCCcchHHHhcCCchhHhhc
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENV-NVDPWYHLKDCLLEGTLPFMKAH 79 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~~~l~~g~~~~~~~~ 79 (168)
+||+|++.|+|++. + +++|++|+.++.|+.+.+ .++..++.+...+. .+..|.+|.+++++|+++|+..+
T Consensus 72 ~L~~L~~~g~~~~~----~----~g~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~ 142 (360)
T 1tw3_A 72 LIRHLVAIGLLEED----A----PGEFVPTEVGELLADDHP-AAQRAWHDLTQAVARADISFTRLPDAIRTGRPTYESIY 142 (360)
T ss_dssp HHHHHHHTTSEEEE----E----TTEEEECTTGGGGSTTST-TCHHHHTCTTSHHHHHGGGGGGHHHHHHHCCCCHHHHH
T ss_pred HHHHHHHCCCEEec----C----CCeEEeCHHHHHHhcCCc-hhHHHHHHHhcCchhHHHHHHHHHHHHHcCCCHHHHhc
Confidence 48999999999985 1 789999999998887755 47888887653332 57899999999999999998888
Q ss_pred CCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHh
Q 030988 80 NAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIK 159 (168)
Q Consensus 80 g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~ 159 (168)
| .++|+++..+|+....|.++|...+....+.+++.++ ++...+|||||||+|.++..+++++|+++++.+|+|.+++
T Consensus 143 g-~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~ 220 (360)
T 1tw3_A 143 G-KPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVD 220 (360)
T ss_dssp S-SCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHH
T ss_pred C-CCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHHHhCC-CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHH
Confidence 8 8999999999999999999999877766678899998 8888999999999999999999999999999999998888
Q ss_pred hCC
Q 030988 160 DAP 162 (168)
Q Consensus 160 ~a~ 162 (168)
.++
T Consensus 221 ~a~ 223 (360)
T 1tw3_A 221 TAR 223 (360)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 13
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.86 E-value=7.3e-23 Score=163.51 Aligned_cols=145 Identities=20% Similarity=0.240 Sum_probs=117.3
Q ss_pred CccccccCCcccceeecCCCCccccceecchhccccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhcC
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAHN 80 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~g 80 (168)
+||+|+++|+|++. +++|++|+.++.|+++.+ ...++.+. .+..++.|.+|++++|+|++++...+|
T Consensus 70 lLr~l~~~g~l~~~---------~~~y~~t~~s~~L~~~~~---~~~~~~~~-~~~~~~~~~~L~~~lr~g~~~~~~~~g 136 (363)
T 3dp7_A 70 LLEASLTIGTILLE---------EDRYVLAKAGWFLLNDKM---ARVNMEFN-HDVNYQGLFHLEEALLNGRPEGLKVFG 136 (363)
T ss_dssp HHHHHHHHTSEEEE---------TTEEEECHHHHHHHHCHH---HHHHHHHH-HHTTHHHHTTHHHHHHHSSCGGGGGTC
T ss_pred HHHHHhhCCCeEec---------CCEEecccchHHhhCCCc---ccchheee-cHHhhhhHHHHHHHHhcCCCccccccC
Confidence 58999999999884 789999999988886542 23333333 456788999999999999998888888
Q ss_pred -CCchhHHhHhcHHHHH----HHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 81 -AKNPFEYAMKAARRRN----LFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 81 -~~~~~e~~~~~p~~~~----~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
+.++|+++.++|+..+ .|+++|..... ..+++.+. ..+..+|||||||+|.++..+++++|+++++++|+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~---~~~l~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~ 212 (363)
T 3dp7_A 137 EWPTIYEGLSQLPEQVQKSWFGFDHFYSDQSF---GKALEIVF-SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLP 212 (363)
T ss_dssp CCSSHHHHGGGSCHHHHHHHHHHHHHTTCCCC---HHHHHHHG-GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECH
T ss_pred chHhHHHHHhhCHHHHHHHHHHHHHHhhhhhH---HHHHHHhc-ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCH
Confidence 6799999999998776 37777765432 23445544 467789999999999999999999999999999999
Q ss_pred HHHhhCC
Q 030988 156 HVIKDAP 162 (168)
Q Consensus 156 ~vi~~a~ 162 (168)
.+++.++
T Consensus 213 ~~~~~a~ 219 (363)
T 3dp7_A 213 QQLEMMR 219 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998776
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.82 E-value=9.1e-21 Score=149.11 Aligned_cols=144 Identities=15% Similarity=0.112 Sum_probs=123.8
Q ss_pred CccccccCCcccceeecCCCCccccceecchhc-cccCCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCchhHhhc
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVG-RYLLPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMKAH 79 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~ 79 (168)
+||+|++.|+|++. +++|++|+.+ +.|..+++ .++.+++.+...+..++.|.+|.+++++|+++|+
T Consensus 59 ~L~~L~~~g~l~~~---------~~~y~~t~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--- 125 (335)
T 2r3s_A 59 LCDYLVIIGFMTKQ---------AEGYRLTSDSAMFLDRQSK-FYVGDAIEFLLSPMITNGFNDLTAAVLKGGTAIS--- 125 (335)
T ss_dssp HHHHHHHTTSEEEE---------TTEEEECHHHHHHTCTTST-TCCGGGHHHHTCHHHHGGGTTHHHHHHHTSCCST---
T ss_pred HHHHHHhcCCeEec---------CCEEecCHHHHHHhccCCc-HHHHHHHHHhcchhhHHHHHhHHHHHhcCCCCCC---
Confidence 48999999999874 7899999999 56776554 4788888776444678899999999999887653
Q ss_pred CCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCC--CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHH
Q 030988 80 NAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGF--EEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 80 g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~--~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~v 157 (168)
+ |+++.++|+....|.+.|..........+++.++ + ....+|||||||+|.++..+++++|+.+++.+|++.+
T Consensus 126 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~ 200 (335)
T 2r3s_A 126 ---S-EGTLSPEHPVWVQFAKAMSPMMANPAQLIAQLVN-ENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASV 200 (335)
T ss_dssp ---T-TGGGSTTCTHHHHHHHHSGGGGHHHHHHHHHHHT-C--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHH
T ss_pred ---C-cccccCCHHHHHHHHHHHHHHHhhhHHHHHHhcc-cccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHH
Confidence 3 8888889999999999999988887788999998 8 8889999999999999999999999999999999988
Q ss_pred HhhCC
Q 030988 158 IKDAP 162 (168)
Q Consensus 158 i~~a~ 162 (168)
++.++
T Consensus 201 ~~~a~ 205 (335)
T 2r3s_A 201 LEVAK 205 (335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 15
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.82 E-value=4.4e-21 Score=152.73 Aligned_cols=140 Identities=17% Similarity=0.329 Sum_probs=118.0
Q ss_pred CccccccCCcccceeecCCCCccccceecchhcc-ccCCCCCC--CChHHHHHhhcCccccccCCcchHHHhcCCchhHh
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGR-YLLPNEDG--VSLAPIFLLSQENVNVDPWYHLKDCLLEGTLPFMK 77 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~-~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~ 77 (168)
+||+|++.|+|++. +++|++|+.+. .|.++.+. .++.+++.+. .+..++.|.+|++++++|++
T Consensus 84 lLr~L~~~gll~~~---------~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~~---- 149 (359)
T 1x19_A 84 LLETLRQMRVINLE---------DGKWSLTEFADYMFSPTPKEPNLHQTPVAKAM-AFLADDFYMGLSQAVRGQKN---- 149 (359)
T ss_dssp HHHHHHHTTSEEEE---------TTEEEECHHHHHHSSSSCSBTTBCCHHHHHHH-HHHHHHTGGGHHHHHTTSCC----
T ss_pred HHHHHHhCCCeEee---------CCeEecCHHHHHHhcCCCCCccccHHHHHHHH-HHHHHHHHHHHHHHHhcCCC----
Confidence 48999999999995 56999999755 56555430 3788887765 35668899999999987654
Q ss_pred hcCCCchhHHhHhcHH---HHHHHHHHHHHhhH-HHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEcc
Q 030988 78 AHNAKNPFEYAMKAAR---RRNLFNQSMHNHAA-LVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFD 153 (168)
Q Consensus 78 ~~g~~~~~e~~~~~p~---~~~~f~~~m~~~~~-~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~D 153 (168)
|+++.++|+ ..+.|.++|...+. ...+.+++.++ ++...+|||||||+|.++..+++++|+++++++|
T Consensus 150 -------~~~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D 221 (359)
T 1x19_A 150 -------FKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILN 221 (359)
T ss_dssp -------CCCSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEE
T ss_pred -------CcccccCchhhHHHHHHHHHHHHhccchhHHHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEe
Confidence 566777888 88999999999887 77788999999 9888999999999999999999999999999999
Q ss_pred chHHHhhCC
Q 030988 154 LPHVIKDAP 162 (168)
Q Consensus 154 lP~vi~~a~ 162 (168)
+|.+++.++
T Consensus 222 ~~~~~~~a~ 230 (359)
T 1x19_A 222 LPGAIDLVN 230 (359)
T ss_dssp CGGGHHHHH
T ss_pred cHHHHHHHH
Confidence 999988765
No 16
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.82 E-value=2.6e-20 Score=147.68 Aligned_cols=141 Identities=21% Similarity=0.307 Sum_probs=113.9
Q ss_pred CccccccCCcccceeecCCCCccccceecchhcccc-CCCCCCCChHHHHHhhcCccccccCCcchHHHhcCCch-hHhh
Q 030988 1 MLQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYL-LPNEDGVSLAPIFLLSQENVNVDPWYHLKDCLLEGTLP-FMKA 78 (168)
Q Consensus 1 lLr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~-~~~~ 78 (168)
+||+|+++|+|++. +++|++|+.++.+ .++.+ .++..++.+. ...++.|.+|++++++|++. |+.
T Consensus 76 lLr~L~~~gll~~~---------~~~y~~t~~s~~~l~~~~~-~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~- 142 (352)
T 3mcz_A 76 LLHALAALGLLTKE---------GDAFRNTALTERYLTTTSA-DYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQ- 142 (352)
T ss_dssp HHHHHHHTTSEEEE---------TTEEEECHHHHHHHSTTCT-TCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSH-
T ss_pred HHHHHHHCCCeEec---------CCeeecCHHHHhhccCCCh-hhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCccc-
Confidence 58999999999995 6789999999864 44443 5788877654 35688999999999998764 221
Q ss_pred cCCCchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCC-CCeEEEecCCccHHHHHHHHHCCCCeEEEccchHH
Q 030988 79 HNAKNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEE-INQLVDVAGGLGANISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 79 ~g~~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~-~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~v 157 (168)
..++.++|+..+.|.++|...... ...+++.++ ++. ..+|||||||+|.++..+++++|+++++++|+|.+
T Consensus 143 ------~~~~~~~~~~~~~f~~~m~~~~~~-~~~~l~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~ 214 (352)
T 3mcz_A 143 ------ESRFAHDTRARDAFNDAMVRLSQP-MVDVVSELG-VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTT 214 (352)
T ss_dssp ------HHHTTTCHHHHHHHHHHHHHHHHH-HHHHHHTCG-GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGG
T ss_pred ------ccccccCHHHHHHHHHHHHhhhhh-HHHHHHhCC-CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHH
Confidence 122357899999999999884332 237888898 887 89999999999999999999999999999999998
Q ss_pred HhhCC
Q 030988 158 IKDAP 162 (168)
Q Consensus 158 i~~a~ 162 (168)
++.++
T Consensus 215 ~~~a~ 219 (352)
T 3mcz_A 215 RDAAR 219 (352)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87665
No 17
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.16 E-value=8.1e-06 Score=62.39 Aligned_cols=42 Identities=26% Similarity=0.438 Sum_probs=37.2
Q ss_pred CCCCeEEEecCCc---cHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGL---GANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~---G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+ |.++..+.+.+|+.+++.+|+ |.+++.++
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar 121 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGR 121 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHH
Confidence 3557999999999 999888889999999999999 88888765
No 18
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.08 E-value=2.3e-06 Score=62.66 Aligned_cols=38 Identities=24% Similarity=0.290 Sum_probs=32.7
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||||||+|.++..+++..| +++.+|. |..++.++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~ 77 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAR 77 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHH
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHH
Confidence 57999999999999999999988 8888898 77776554
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.98 E-value=1.6e-05 Score=58.50 Aligned_cols=51 Identities=22% Similarity=0.276 Sum_probs=40.8
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++......+|||||||+|.++..+++.+|..+++.+|. |..++.++
T Consensus 34 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 85 (234)
T 3dtn_A 34 VSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAK 85 (234)
T ss_dssp HHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 4455444234558999999999999999999999999999999 77766554
No 20
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.92 E-value=2.2e-05 Score=56.78 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=42.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.++..++ .....+|||||||+|.++..+++..|..+++.+|. |..++.++
T Consensus 31 ~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~ 81 (204)
T 3e05_A 31 VTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIR 81 (204)
T ss_dssp HHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHH
T ss_pred HHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 4556666 67778999999999999999999999999999998 77766554
No 21
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.87 E-value=2.2e-05 Score=56.63 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=36.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
.+++.++......+|+|+|||+|.++..+++.+|+.+++.+|. |..++.++.
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~ 72 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARR 72 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHH
Confidence 4555555225668999999999999999999999999999998 777777663
No 22
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.84 E-value=2e-05 Score=57.73 Aligned_cols=41 Identities=29% Similarity=0.350 Sum_probs=35.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++.+|+.+++.+|. |..++.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~ 79 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAV 79 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHH
Confidence 446899999999999999999999999999998 56665543
No 23
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.83 E-value=1.7e-05 Score=55.76 Aligned_cols=50 Identities=16% Similarity=0.209 Sum_probs=41.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|+|||||+|.++..+++.+|..+++.+|. |..++.++
T Consensus 16 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~ 66 (178)
T 3hm2_A 16 LAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERIL 66 (178)
T ss_dssp HHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHH
T ss_pred HHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 4555566 66667999999999999999999999999999998 65666554
No 24
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.81 E-value=2.4e-05 Score=57.12 Aligned_cols=41 Identities=29% Similarity=0.363 Sum_probs=35.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++.+|+.+++.+|. |..++.++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~ 82 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYAL 82 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHH
Confidence 457899999999999999999999999999998 66666543
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.77 E-value=2.4e-05 Score=56.60 Aligned_cols=50 Identities=18% Similarity=0.227 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 110 MKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 110 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+++.++ .+.. +|||||||+|.++..++++ |..+++.+|. |..++.++
T Consensus 33 ~~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~ 83 (219)
T 3dlc_A 33 AENIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIAL 83 (219)
T ss_dssp HHHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHH
T ss_pred HHHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHH
Confidence 345666666 5554 9999999999999999998 8899999998 76666554
No 26
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.77 E-value=2.8e-05 Score=56.73 Aligned_cols=49 Identities=14% Similarity=0.195 Sum_probs=38.9
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+.+.++ .....+|||||||+|.++..+++++|..+++.+|. |..++.++
T Consensus 21 l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~ 70 (217)
T 3jwh_A 21 VVAALK-QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQ 70 (217)
T ss_dssp HHHHHH-HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHH
T ss_pred HHHHHH-hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHH
Confidence 333343 34457999999999999999999999999999998 66666554
No 27
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.77 E-value=1.8e-05 Score=57.24 Aligned_cols=40 Identities=18% Similarity=0.081 Sum_probs=34.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|+|||||+|.++..+++.+|..+++.+|. |..++.++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 106 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLR 106 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 47999999999999999999999999999998 66665543
No 28
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.76 E-value=3.3e-05 Score=57.01 Aligned_cols=40 Identities=13% Similarity=0.272 Sum_probs=34.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
...+|||||||+|.++..+++++|+.+++.+|. |..++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a 74 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGAC 74 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHH
Confidence 457999999999999999999999999999998 5555543
No 29
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.75 E-value=0.00012 Score=55.56 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=39.3
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC--CCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKY--PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~--P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.+ .+...+|+|||||+|.++..+++++ |+++++.+|. |..++.|+
T Consensus 62 ~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~ 113 (261)
T 4gek_A 62 MLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCR 113 (261)
T ss_dssp HHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHH
T ss_pred HHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHH
Confidence 345555 3566799999999999999999985 6789999998 77777654
No 30
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.75 E-value=6e-05 Score=56.70 Aligned_cols=51 Identities=12% Similarity=0.146 Sum_probs=41.7
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPSY 164 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~~ 164 (168)
..+.+.++ .....+|||||||+|.++..+++ |+.+++.+|+ |..++.++..
T Consensus 24 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~ 75 (261)
T 3ege_A 24 NAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH 75 (261)
T ss_dssp HHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC
T ss_pred HHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc
Confidence 35666666 66778999999999999999998 7889999998 6677766543
No 31
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.75 E-value=2.6e-05 Score=56.87 Aligned_cols=49 Identities=20% Similarity=0.296 Sum_probs=39.0
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+.+.+. .....+|||||||+|.++..++++.|..+++.+|. |..++.++
T Consensus 21 l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~ 70 (219)
T 3jwg_A 21 VVAVLK-SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAK 70 (219)
T ss_dssp HHHHHH-HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHH
T ss_pred HHHHHh-hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence 333343 34457999999999999999999999999999998 66666554
No 32
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.74 E-value=2.2e-05 Score=58.74 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=43.3
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..++...+ .....+|||+|||+|.++..+++. .|..+++.+|. |..++.|+
T Consensus 83 ~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~ 135 (255)
T 3mb5_A 83 ALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAW 135 (255)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHH
T ss_pred HHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHH
Confidence 35666677 777789999999999999999999 89999999999 67776654
No 33
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.71 E-value=3.5e-05 Score=58.58 Aligned_cols=50 Identities=14% Similarity=0.038 Sum_probs=38.9
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ +....+|||+|||+|.++..+++. +|..+++.+|. |..++.++
T Consensus 101 ~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~ 152 (275)
T 1yb2_A 101 YIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAM 152 (275)
T ss_dssp -----CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHH
T ss_pred HHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence 4556666 777789999999999999999998 89999999998 77766543
No 34
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.71 E-value=8.4e-05 Score=57.37 Aligned_cols=64 Identities=13% Similarity=0.162 Sum_probs=45.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 97 LFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 97 ~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.|.+ +..........+++.++.+....+|||||||+|.++..+++++ ..+++.+|. |..++.++
T Consensus 93 ~f~~-~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~ 157 (312)
T 3vc1_A 93 VIAE-LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGN 157 (312)
T ss_dssp HHHH-HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHH
T ss_pred HHhh-hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence 4444 3333333334555555435566899999999999999999986 678999998 66666554
No 35
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.69 E-value=5e-05 Score=56.58 Aligned_cols=49 Identities=12% Similarity=0.232 Sum_probs=38.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+.+.++ .....+|||||||+|.++..+++..+. +++.+|. |..++.++
T Consensus 35 ~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~ 84 (253)
T 3g5l_A 35 ELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAK 84 (253)
T ss_dssp HHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHH
T ss_pred HHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHH
Confidence 4455555 445689999999999999999999766 8999998 66666553
No 36
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.68 E-value=3.6e-05 Score=56.03 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=41.7
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||||||+|.++..+++.. |..+++.+|. |..++.++
T Consensus 28 ~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 79 (219)
T 3dh0_A 28 KVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAW 79 (219)
T ss_dssp HHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH
Confidence 4666666 7777899999999999999999997 8899999998 66666543
No 37
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.67 E-value=6.8e-05 Score=57.54 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=41.7
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++.++ .....+|||||||+|.++..++++++ .+++.+|+ |..++.++
T Consensus 62 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~ 112 (302)
T 3hem_A 62 KLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDK 112 (302)
T ss_dssp HHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHH
T ss_pred HHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHH
Confidence 35667676 77778999999999999999999988 89999998 66666554
No 38
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.65 E-value=4.4e-05 Score=55.68 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=34.5
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHh
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIK 159 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~ 159 (168)
.....+|||||||+|.++..+++.+|..+++.+|. |..++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~ 65 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRME 65 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGH
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 45567999999999999999999999999999998 44333
No 39
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.65 E-value=4e-05 Score=58.84 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=36.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++++|..+++.+|. |..++.|+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~ 87 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSAR 87 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 458999999999999999999999999999998 77777665
No 40
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.64 E-value=3.8e-05 Score=57.24 Aligned_cols=50 Identities=20% Similarity=0.266 Sum_probs=41.3
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||||||+|.++..+++.+|..+++.+|. |..++.++
T Consensus 24 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~ 74 (259)
T 2p35_A 24 DLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAA 74 (259)
T ss_dssp HHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 4566666 66668999999999999999999999999999998 66666543
No 41
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.64 E-value=9.4e-05 Score=56.65 Aligned_cols=42 Identities=33% Similarity=0.359 Sum_probs=36.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++++ |..+++.+|. |..++.++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~ 78 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAE 78 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Confidence 566899999999999999999997 8999999998 66776654
No 42
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.63 E-value=0.00013 Score=54.86 Aligned_cols=49 Identities=14% Similarity=0.326 Sum_probs=40.5
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+++.++ .....+|||||||+|.++..+++++ ..+++.+|+ |..++.+
T Consensus 51 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a 100 (273)
T 3bus_A 51 DEMIALLD-VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQA 100 (273)
T ss_dssp HHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHH
Confidence 45677777 7777899999999999999999987 689999998 6665544
No 43
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.63 E-value=0.0001 Score=54.84 Aligned_cols=50 Identities=14% Similarity=0.282 Sum_probs=40.6
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++.++ .....+|||||||+|.++..+++.+ ..+++.+|. |..++.++
T Consensus 26 ~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~ 76 (256)
T 1nkv_A 26 ATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAK 76 (256)
T ss_dssp HHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHH
Confidence 35666666 7777899999999999999999988 678999998 66666553
No 44
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.62 E-value=3.2e-05 Score=57.71 Aligned_cols=41 Identities=15% Similarity=0.277 Sum_probs=34.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|||||||+|.++..+++.+|+..++.+|. +..++.|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A 86 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYV 86 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence 3457899999999999999999999999999998 6666543
No 45
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.61 E-value=9.5e-05 Score=53.06 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=37.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCC--CCeEEEccchH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYP--QIRGINFDLPH 156 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P--~l~~~v~DlP~ 156 (168)
.+.+.|..+....+|+|||||+|.++..+++++| ..+++.+|+.+
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 12 ELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp HHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 4566666245567999999999999999999998 68899999854
No 46
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.61 E-value=3.7e-05 Score=60.06 Aligned_cols=40 Identities=18% Similarity=0.322 Sum_probs=36.9
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
.+|||||||.|.++..+++.+|+.+++++|+ |.+++.++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~ 131 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSRE 131 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHH
Confidence 4999999999999999999999999999998 888888763
No 47
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.60 E-value=9.9e-05 Score=60.76 Aligned_cols=50 Identities=14% Similarity=0.043 Sum_probs=39.3
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~ 162 (168)
..+++.++ .....+|+|||||+|.+++.+++ .|..+++.+|..+.++.|+
T Consensus 148 ~~il~~l~-~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~ 197 (480)
T 3b3j_A 148 RAILQNHT-DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAE 197 (480)
T ss_dssp HHHHHTGG-GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHH
T ss_pred HHHHHhhh-hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHH
Confidence 35666665 55567999999999999998887 6888999999977655543
No 48
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.59 E-value=6e-05 Score=56.89 Aligned_cols=43 Identities=19% Similarity=0.427 Sum_probs=37.7
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+....+|||||||+|.++..+++.+|..+++.+|. |..++.++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 78 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAR 78 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 56678999999999999999999999999999998 66666543
No 49
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.59 E-value=3.2e-05 Score=57.62 Aligned_cols=40 Identities=10% Similarity=0.044 Sum_probs=34.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|..+..+++..|. +++++|. |.+++.|+
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~ 100 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLR 100 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHH
T ss_pred CCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHH
Confidence 4469999999999999999998775 7888898 88888775
No 50
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.56 E-value=5.8e-05 Score=56.38 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=35.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|||||||+|.++..+++.+|+.+++.+|. |..++.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a 89 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYV 89 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHH
Confidence 4557999999999999999999999999999996 6666544
No 51
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.55 E-value=0.00024 Score=50.60 Aligned_cols=45 Identities=20% Similarity=0.109 Sum_probs=36.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC---------CeEEEccchH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ---------IRGINFDLPH 156 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~---------l~~~v~DlP~ 156 (168)
.+.+.+..+....+|||||||+|.++..+++++|. .+++.+|+-+
T Consensus 12 ~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~ 65 (196)
T 2nyu_A 12 EVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLH 65 (196)
T ss_dssp HHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSC
T ss_pred HHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechh
Confidence 45555653456689999999999999999999875 7899999854
No 52
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.54 E-value=0.00015 Score=52.48 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=39.0
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
.+++.+.......+|||||||+|.++..++++ ..+++.+|. |..++.++.
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh
Confidence 45555543455579999999999999999998 678999998 777776553
No 53
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.53 E-value=9.9e-05 Score=56.20 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=38.7
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHHhhC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ-IRGINFDL-PHVIKDA 161 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-P~vi~~a 161 (168)
+++.+.......+|||||||+|.++..+++.+|. .+++.+|+ |..++.+
T Consensus 13 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a 63 (284)
T 3gu3_A 13 LVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEA 63 (284)
T ss_dssp HHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHH
T ss_pred HHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 4444422566789999999999999999999995 89999998 6566543
No 54
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.50 E-value=0.00017 Score=50.48 Aligned_cols=48 Identities=15% Similarity=0.079 Sum_probs=38.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|+|||||+|.++..+++ +..+++.+|. |..++.++
T Consensus 26 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~ 74 (183)
T 2yxd_A 26 VSIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTK 74 (183)
T ss_dssp HHHHHHC-CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHH
T ss_pred HHHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHH
Confidence 4555556 66667999999999999999999 8899999997 66665543
No 55
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.50 E-value=0.00014 Score=58.07 Aligned_cols=50 Identities=20% Similarity=0.219 Sum_probs=40.8
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|+|+|||+|.+++.+++++|..+++.+|. |..++.++
T Consensus 213 ~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar 263 (375)
T 4dcm_A 213 FFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 263 (375)
T ss_dssp HHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHH
Confidence 3566666 44447999999999999999999999999999998 66665543
No 56
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.50 E-value=0.00012 Score=54.17 Aligned_cols=48 Identities=21% Similarity=0.147 Sum_probs=37.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch-H-HHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP-H-VIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP-~-vi~~a 161 (168)
.+.+.+. ....+|||||||+|.++..+++++|+.+++.+|+- + +++.|
T Consensus 16 ~~~~~~~--~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A 65 (225)
T 3p2e_A 16 ELTEIIG--QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDIS 65 (225)
T ss_dssp HHHHHHT--TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHH
T ss_pred HHHHHhC--CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 3444443 34579999999999999999999999999999983 4 44443
No 57
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.49 E-value=4e-05 Score=55.71 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=35.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|+|+|||+|.++..++...|+.+.+..|. +.-++.++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar 90 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLS 90 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHH
Confidence 4467999999999999999999999999999998 45555443
No 58
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.49 E-value=6.1e-05 Score=55.96 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=39.2
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++.++ .....+|||||||+|.++..++++. ..+++.+|. |..++.++
T Consensus 83 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~ 133 (254)
T 1xtp_A 83 RNFIASLP-GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAK 133 (254)
T ss_dssp HHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHH
T ss_pred HHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHH
Confidence 35666666 5667899999999999999999887 557899997 66666543
No 59
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.48 E-value=0.00018 Score=53.53 Aligned_cols=51 Identities=12% Similarity=0.193 Sum_probs=42.7
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..++..++ +....+|||+|||+|.++..+++. .|..+++.+|. |..++.++
T Consensus 86 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~ 138 (258)
T 2pwy_A 86 SAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAE 138 (258)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred HHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 35667777 777789999999999999999999 78999999997 76666553
No 60
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.48 E-value=6.7e-05 Score=57.96 Aligned_cols=42 Identities=12% Similarity=0.111 Sum_probs=36.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.+++.+++..|..+++.+|+ |.+++.++
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar 124 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCR 124 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHH
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3568999999999999999999878889999998 77887665
No 61
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.48 E-value=8e-05 Score=54.62 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=36.1
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||||||+|..++.+++..| +.+++.+|. |..++.++
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 111 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGR 111 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHH
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 34557999999999999999999988 789999998 76666554
No 62
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.48 E-value=9.7e-05 Score=56.65 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=35.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|.+++.+++. |+.+++.+|. |..++.|+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~ 163 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIAR 163 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHH
Confidence 3468999999999999999999 9999999998 77776654
No 63
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.48 E-value=0.00019 Score=54.46 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=42.7
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..++..++ +....+|||+|||+|.++..++++ .|..+++.+|. |..++.++
T Consensus 102 ~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~ 154 (277)
T 1o54_A 102 SFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAE 154 (277)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHH
T ss_pred HHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH
Confidence 35667777 777789999999999999999999 78999999998 76666554
No 64
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.48 E-value=0.00031 Score=52.78 Aligned_cols=44 Identities=14% Similarity=0.249 Sum_probs=37.9
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccch
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDLP 155 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~DlP 155 (168)
..+++.++ .....+|||||||+|.++..+++++ |+.+++.+|+-
T Consensus 33 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s 77 (275)
T 3bkx_A 33 LAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIA 77 (275)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSS
T ss_pred HHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECC
Confidence 35667777 7777899999999999999999996 88999999984
No 65
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.48 E-value=8.3e-05 Score=55.94 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=35.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|+|||||+|..++.++..+|+.+++.+|. |..++.+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a 120 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFV 120 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHH
Confidence 4567999999999999999999999999999996 5555544
No 66
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.48 E-value=0.00015 Score=53.59 Aligned_cols=48 Identities=21% Similarity=0.322 Sum_probs=35.5
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+....+.++...+|||||||+|.++..+++. +.+++.+|+ |..++.++
T Consensus 32 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~ 80 (240)
T 3dli_A 32 LRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCE 80 (240)
T ss_dssp HGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHH
T ss_pred HHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHH
Confidence 3333442455689999999999999999998 557889998 66665543
No 67
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.48 E-value=0.00019 Score=54.66 Aligned_cols=49 Identities=16% Similarity=0.247 Sum_probs=38.8
Q ss_pred HHHHHHc----CCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIY----KGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~----~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+++.+ + +....+|||||||+|.++..+++++ ..+++.+|+ |..++.+
T Consensus 68 ~~l~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a 121 (297)
T 2o57_A 68 EWLASELAMTGV-LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRN 121 (297)
T ss_dssp HHHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHH
T ss_pred HHHHHHhhhccC-CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHH
Confidence 3556666 5 6777899999999999999999987 458999998 5555544
No 68
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.47 E-value=0.00015 Score=54.00 Aligned_cols=48 Identities=17% Similarity=0.270 Sum_probs=38.1
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
+++.+.......+|||||||+|.++..+++.+|. +++.+|. |..++.+
T Consensus 37 ~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a 85 (257)
T 3f4k_A 37 AVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIF 85 (257)
T ss_dssp HHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHH
Confidence 4444432556679999999999999999999987 9999998 6666654
No 69
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.46 E-value=0.00021 Score=50.19 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=37.4
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+++.+.......+|+|+|||+|.++..++++ +..+++.+|. |..++.++
T Consensus 22 ~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~ 71 (177)
T 2esr_A 22 IFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQ 71 (177)
T ss_dssp HHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHH
T ss_pred HHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHH
Confidence 3444432345579999999999999999987 7789999998 66766554
No 70
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.45 E-value=0.00017 Score=53.45 Aligned_cols=49 Identities=12% Similarity=0.231 Sum_probs=40.2
Q ss_pred HHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 110 MKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 110 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
...+++..+ .....+|||||||+|.++..+++..+ +++.+|. |..++.+
T Consensus 10 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a 59 (239)
T 1xxl_A 10 LGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVA 59 (239)
T ss_dssp HHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHH
T ss_pred cchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHH
Confidence 346777787 78889999999999999999999876 7888897 6566544
No 71
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.45 E-value=0.00012 Score=54.41 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=35.8
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
+....+|+|||||+|.++..+++..|+.+++.+|. |..++.+
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a 110 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFL 110 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHH
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHH
Confidence 34567999999999999999999999999999998 6555544
No 72
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.45 E-value=0.00014 Score=54.38 Aligned_cols=48 Identities=25% Similarity=0.382 Sum_probs=38.9
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||||||+|.++..+++..+ +++.+|+ |..++.++
T Consensus 28 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~ 76 (260)
T 1vl5_A 28 KLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVAR 76 (260)
T ss_dssp HHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHH
T ss_pred HHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHH
Confidence 5666666 66778999999999999999999986 8899997 66665543
No 73
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.44 E-value=0.00018 Score=54.63 Aligned_cols=49 Identities=22% Similarity=0.256 Sum_probs=39.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||||||+|.++..++++++. +++.+|+ |..++.++
T Consensus 55 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~ 104 (287)
T 1kpg_A 55 LALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQ 104 (287)
T ss_dssp HHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHH
T ss_pred HHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHH
Confidence 4566666 666789999999999999999977764 9999998 66666543
No 74
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.44 E-value=0.00019 Score=55.69 Aligned_cols=50 Identities=24% Similarity=0.397 Sum_probs=41.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....++||+|||+|.++..+++++|+.+++.+|. |..++.|+
T Consensus 17 e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~ 67 (301)
T 1m6y_A 17 EVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAE 67 (301)
T ss_dssp HHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 4556666 66668999999999999999999999999999998 66666554
No 75
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.43 E-value=0.00014 Score=54.59 Aligned_cols=49 Identities=16% Similarity=0.216 Sum_probs=38.2
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+++.++......+|||||||+|.++..+++. |..+++.+|+ |..++.++
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~ 86 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFN 86 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHH
T ss_pred HHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHH
Confidence 3333332456689999999999999999998 8899999998 66665543
No 76
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.43 E-value=9e-05 Score=55.27 Aligned_cols=50 Identities=26% Similarity=0.458 Sum_probs=40.1
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++.++ .....+|||||||+|.++..+++++ ..+++.+|. |..++.++
T Consensus 45 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~ 95 (266)
T 3ujc_A 45 KKILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMAN 95 (266)
T ss_dssp HHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence 34555565 6677899999999999999999988 789999998 66665544
No 77
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.43 E-value=0.0001 Score=55.72 Aligned_cols=43 Identities=12% Similarity=0.150 Sum_probs=36.9
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||+|||+|.+++.+++++|..+++.+|. |..++.++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~ 77 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFAR 77 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 55567999999999999999999999999999998 66665543
No 78
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.42 E-value=0.00029 Score=53.42 Aligned_cols=49 Identities=27% Similarity=0.320 Sum_probs=38.9
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ ....+|+|||||+|.++..+++.+|+.+++.+|. |..++.++
T Consensus 101 ~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~ 150 (276)
T 2b3t_A 101 QALARLP--EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQ 150 (276)
T ss_dssp HHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHH
T ss_pred HHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 3444443 3446999999999999999999999999999998 66665543
No 79
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.42 E-value=0.00017 Score=53.28 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=41.1
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++.++ .....+|||||||+|.++..+++..| .+++.+|. |..++.++
T Consensus 81 ~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~ 131 (235)
T 1jg1_A 81 AIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAK 131 (235)
T ss_dssp HHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHH
Confidence 45666666 77778999999999999999999998 88999996 66666554
No 80
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.42 E-value=0.00019 Score=54.31 Aligned_cols=44 Identities=18% Similarity=0.110 Sum_probs=36.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCCCCCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPSYQGI 167 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~~~~~ 167 (168)
...+|||||||+|.++..+++.+ .+++.+|. |..++.|+..++|
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v 83 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRV 83 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTE
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCc
Confidence 34689999999999999999986 46888898 6788888876654
No 81
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.42 E-value=0.00021 Score=53.50 Aligned_cols=40 Identities=23% Similarity=0.341 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..++++.+ +++.+|. |..++.++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~ 89 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIAR 89 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHH
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHH
Confidence 3457999999999999999999854 7888998 77776654
No 82
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.41 E-value=0.00011 Score=54.48 Aligned_cols=43 Identities=12% Similarity=0.235 Sum_probs=37.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||||||+|..+..+++.+|..+++.+|. |..++.++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~ 112 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAK 112 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHH
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 34557999999999999999999999999999998 77776654
No 83
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.41 E-value=0.00021 Score=51.78 Aligned_cols=47 Identities=9% Similarity=0.031 Sum_probs=37.3
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+++.+. .....+|+|||||+|..+..++++ ..+++.+|+ |..++.|+
T Consensus 14 ~~~~l~-~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~ 61 (203)
T 1pjz_A 14 YWSSLN-VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYF 61 (203)
T ss_dssp HHHHHC-CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHH
T ss_pred HHHhcc-cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHH
Confidence 444455 566689999999999999999997 668999998 66666554
No 84
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.41 E-value=0.00027 Score=51.36 Aligned_cols=47 Identities=19% Similarity=0.160 Sum_probs=38.4
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
++..++ .....+|+|||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 47 ~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~ 94 (204)
T 3njr_A 47 TLAALA-PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQ 94 (204)
T ss_dssp HHHHHC-CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHhcC-CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHH
Confidence 455566 666789999999999999999998 789999998 66666544
No 85
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.39 E-value=9.8e-05 Score=57.99 Aligned_cols=50 Identities=18% Similarity=0.239 Sum_probs=40.5
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|+|||||+|.++..+++.+|+.+++.+|. |..++.++
T Consensus 187 ~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~ 237 (343)
T 2pjd_A 187 LLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASR 237 (343)
T ss_dssp HHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHH
T ss_pred HHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 4666675 44456899999999999999999999999999998 55565543
No 86
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.39 E-value=0.00012 Score=53.96 Aligned_cols=40 Identities=8% Similarity=0.155 Sum_probs=34.5
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHh
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIK 159 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~ 159 (168)
+....+|+|||||+|.++..+++.+|..+++.+|. |..++
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~ 112 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMR 112 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHH
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHH
Confidence 55668999999999999999999999888999998 55554
No 87
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.39 E-value=0.00014 Score=53.53 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=37.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+...++ .....+|||||||+|.++..+++..+ .+++.+|. |..++.++
T Consensus 34 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~ 83 (243)
T 3bkw_A 34 ALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARAR 83 (243)
T ss_dssp HHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHH
T ss_pred HHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHH
Confidence 4556666 55668999999999999999998733 38899998 66666554
No 88
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.38 E-value=0.00022 Score=54.95 Aligned_cols=50 Identities=16% Similarity=0.270 Sum_probs=40.1
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++.++ .....+|||||||+|.++..+++.+ +.+++.+|. |..++.++
T Consensus 80 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~ 130 (318)
T 2fk8_A 80 DLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCE 130 (318)
T ss_dssp HHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence 35566666 6667899999999999999999987 569999998 66666554
No 89
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.36 E-value=0.0001 Score=56.21 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=36.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|.+++++++..|..+++.+|+ |.+++.++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar 116 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSK 116 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHH
Confidence 457999999999999999999878889999998 88888765
No 90
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.36 E-value=0.00019 Score=52.94 Aligned_cols=42 Identities=7% Similarity=0.215 Sum_probs=36.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|..+..+++.+|..+++.+|. |..++.++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~ 95 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAH 95 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 3456999999999999999999999999999998 66666554
No 91
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.36 E-value=0.00049 Score=49.84 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=37.7
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.+. .....+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 43 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 91 (227)
T 3e8s_A 43 AILLAIL-GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAAR 91 (227)
T ss_dssp HHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 4555555 445589999999999999999998 668999998 66666554
No 92
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.35 E-value=0.00029 Score=50.17 Aligned_cols=48 Identities=21% Similarity=0.232 Sum_probs=37.9
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 23 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 71 (199)
T 2xvm_A 23 EVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVE 71 (199)
T ss_dssp HHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHH
Confidence 3555566 555679999999999999999987 678999998 66666543
No 93
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.35 E-value=0.00033 Score=52.89 Aligned_cols=51 Identities=16% Similarity=0.145 Sum_probs=42.0
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..++..++ .....+|||||||+|.++..+++. .|..+++.+|. |..++.++
T Consensus 89 ~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~ 141 (280)
T 1i9g_A 89 AQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHAR 141 (280)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHH
T ss_pred HHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 35666677 777789999999999999999996 68899999998 77766543
No 94
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.34 E-value=0.00037 Score=49.11 Aligned_cols=42 Identities=17% Similarity=0.063 Sum_probs=34.1
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||+|||+|.++..+++ .+..+++.+|. |..++.++
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~ 84 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIK 84 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHH
Confidence 44557999999999999999888 56778999998 66766554
No 95
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.33 E-value=9.5e-05 Score=55.00 Aligned_cols=41 Identities=17% Similarity=0.000 Sum_probs=35.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|.+++.+++..|..+++..|. |..++.|+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~ 56 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAV 56 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 446999999999999999999999999999997 55665554
No 96
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.33 E-value=0.00026 Score=53.59 Aligned_cols=48 Identities=15% Similarity=0.210 Sum_probs=38.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||||||+|.++..+++ |..+++.+|. |..++.++
T Consensus 48 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~ 96 (279)
T 3ccf_A 48 DLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKAR 96 (279)
T ss_dssp HHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHH
T ss_pred HHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHH
Confidence 4556666 66668999999999999999998 7889999998 66555443
No 97
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.32 E-value=0.00033 Score=56.91 Aligned_cols=49 Identities=6% Similarity=0.159 Sum_probs=38.8
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
.+++.++ .....+|||||||+|.+++.+++.+|..+++.+|+ |..++.|
T Consensus 233 ~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 233 DVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLT 282 (433)
T ss_dssp HHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 4455555 66678999999999999999999999889999998 4444433
No 98
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.32 E-value=0.00087 Score=51.81 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=37.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|+|||||+|.++..++.+.|+.+++.+|. |+.++.|+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar 163 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSR 163 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHH
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHH
Confidence 66779999999999988777777789999999998 78887765
No 99
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.32 E-value=0.00032 Score=50.82 Aligned_cols=50 Identities=10% Similarity=0.201 Sum_probs=39.7
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.+. .....+|||||||+|.++..+++.. |+.+++.+|. |..++.++
T Consensus 68 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~ 119 (215)
T 2yxe_A 68 MMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAE 119 (215)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred HHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 4555555 6666899999999999999999988 7789999997 66665543
No 100
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.31 E-value=0.00036 Score=56.40 Aligned_cols=50 Identities=14% Similarity=0.181 Sum_probs=39.6
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+++.+. .....+|+|||||+|.+++.+++.++.-+++.+|+ |..++.|
T Consensus 163 ~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelA 213 (438)
T 3uwp_A 163 AQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYA 213 (438)
T ss_dssp HHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 34566666 66778999999999999999999988778999998 4444433
No 101
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.30 E-value=0.00011 Score=54.86 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=35.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++++|+.+++.+|. |..++.|+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~ 106 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAK 106 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 456999999999999999999999999999998 66666544
No 102
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.29 E-value=0.00018 Score=50.97 Aligned_cols=41 Identities=17% Similarity=0.341 Sum_probs=34.2
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|+|||||+|.++..++++ ..+++.+|. |..++.|+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~ 61 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTS 61 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHH
Confidence 455679999999999999999998 788999997 66666553
No 103
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.29 E-value=0.00018 Score=53.64 Aligned_cols=49 Identities=20% Similarity=0.079 Sum_probs=38.8
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHH--CCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSK--YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~--~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+++.+. -....+|+|+|||+|.+++.+++. +|..+++.+|. |..++.|+
T Consensus 43 ~l~~~~-~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~ 94 (250)
T 1o9g_A 43 ALARLP-GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAA 94 (250)
T ss_dssp HHHTSS-CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHH
T ss_pred HHHhcc-cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHH
Confidence 344343 234579999999999999999998 88889999998 77777654
No 104
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.28 E-value=0.00053 Score=50.96 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
.....+|||||||+|.++..+++. ..+++.+|. |..++.+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a 77 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVF 77 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHH
Confidence 566789999999999999999987 568899997 5555544
No 105
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.28 E-value=0.00011 Score=53.56 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=36.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ ....+|+|||||+|.++..+++. + .+++.+|. |..++.++
T Consensus 24 ~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~ 71 (230)
T 3cc8_A 24 NLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAK 71 (230)
T ss_dssp HHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHH
T ss_pred HHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHH
Confidence 4555444 45579999999999999999998 5 88999998 55655443
No 106
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.28 E-value=0.00037 Score=49.15 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=38.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.+. .....+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 43 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~ 91 (194)
T 1dus_A 43 ILVENVV-VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAK 91 (194)
T ss_dssp HHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHH
T ss_pred HHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHH
Confidence 4566666 666789999999999999999998 778999998 66665543
No 107
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.28 E-value=0.0002 Score=52.28 Aligned_cols=42 Identities=10% Similarity=0.050 Sum_probs=36.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|..+..+++++| +.+++.+|. |..++.++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 100 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIAR 100 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999999999 789999998 77776554
No 108
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.28 E-value=0.00018 Score=55.67 Aligned_cols=42 Identities=12% Similarity=0.164 Sum_probs=36.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++..|..+++.+|+ |.+++.++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~ 136 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSK 136 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 4557999999999999999999888889999998 77877654
No 109
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.27 E-value=0.00033 Score=53.17 Aligned_cols=49 Identities=8% Similarity=0.038 Sum_probs=38.4
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++..+ .....+|||||||+|.++..++++ ..+++.+|. |..++.++
T Consensus 35 ~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar 84 (261)
T 3iv6_A 35 ENDIFLEN-IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLA 84 (261)
T ss_dssp HHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHH
Confidence 34566666 677789999999999999999987 568899998 55665543
No 110
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.26 E-value=0.00021 Score=53.46 Aligned_cols=43 Identities=9% Similarity=0.186 Sum_probs=36.9
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||||||+|..+..+++++| +.+++.+|. |..++.++
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~ 105 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVAR 105 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHH
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 34557999999999999999999999 899999998 77776554
No 111
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.26 E-value=0.00043 Score=51.19 Aligned_cols=41 Identities=29% Similarity=0.455 Sum_probs=33.7
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||||||+|.++..+++..+ +++.+|. |..++.++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~ 95 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAA 95 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHH
Confidence 34557899999999999999999988 7888887 66666553
No 112
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.24 E-value=0.00022 Score=50.95 Aligned_cols=43 Identities=26% Similarity=0.376 Sum_probs=35.6
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||+|||+|.++..+++++ |..+++.+|. |..++.++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 64 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTT 64 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 4555799999999999999999986 7789999998 66666543
No 113
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.24 E-value=0.0002 Score=54.41 Aligned_cols=47 Identities=23% Similarity=0.324 Sum_probs=35.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
.+.+.++ .....+|||||||+|.++..++++. .+++.+|. |..++.+
T Consensus 48 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a 95 (293)
T 3thr_A 48 WLLGLLR-QHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYA 95 (293)
T ss_dssp HHHHHHH-HTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHH
T ss_pred HHHHHhc-ccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHH
Confidence 3444444 4455799999999999999999984 48899998 5566554
No 114
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.24 E-value=0.00018 Score=56.54 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=37.5
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||||||+|.+++.+++..|..+++.+|+ |.+++.|+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar 161 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSK 161 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence 34568999999999999999999888899999998 77877665
No 115
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.23 E-value=0.00032 Score=55.19 Aligned_cols=52 Identities=17% Similarity=0.066 Sum_probs=43.3
Q ss_pred HHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 110 MKKILEIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 110 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
+..++.... |.....|+|+|||+|.++++++... |+.+++.+|. |..++.|+
T Consensus 192 a~~l~~~~~-~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~ 245 (354)
T 3tma_A 192 AQALLRLAD-ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAR 245 (354)
T ss_dssp HHHHHHHTT-CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHH
T ss_pred HHHHHHHhC-CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHH
Confidence 345566666 8878899999999999999999998 9999999998 66776554
No 116
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.22 E-value=0.00018 Score=56.21 Aligned_cols=41 Identities=22% Similarity=0.140 Sum_probs=36.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|.+++.+++..|..+++.+|. |.+++.++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar 157 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSK 157 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence 457999999999999999999888899999998 78887665
No 117
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.21 E-value=0.00015 Score=54.49 Aligned_cols=41 Identities=10% Similarity=0.055 Sum_probs=35.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|.+++.+++..|..+++..|. |..++.|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~ 62 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQ 62 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 447999999999999999999999999999997 55665554
No 118
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.21 E-value=0.00054 Score=48.19 Aligned_cols=48 Identities=23% Similarity=0.220 Sum_probs=38.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||+|||+|.++..+++.. .+++.+|. |..++.++
T Consensus 24 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~ 72 (192)
T 1l3i_A 24 LIMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTE 72 (192)
T ss_dssp HHHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHH
Confidence 3455556 6667899999999999999999987 78899998 66666543
No 119
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.20 E-value=0.0002 Score=54.85 Aligned_cols=42 Identities=21% Similarity=0.147 Sum_probs=37.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|+|||||.|..+..+++..|..+++.+|+ |.+++.++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~ 119 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSK 119 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence 4558999999999999999999888899999998 77887665
No 120
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.20 E-value=0.00036 Score=52.36 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=35.5
Q ss_pred CC-CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FE-EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~-~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.. ...+|||||||+|.++..++++.+. +++.+|. |..++.++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~ 89 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAK 89 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHH
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHH
Confidence 66 6789999999999999999999877 8999998 66666543
No 121
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.19 E-value=0.0002 Score=55.23 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=36.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|.++..+++..|..+++.+|+ |.+++.++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~ 131 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAAR 131 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence 347999999999999999999888899999998 77877654
No 122
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.19 E-value=0.00057 Score=49.21 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=36.1
Q ss_pred HHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 109 VMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
....+.+.|.-+....+|||+|||+|.++..++++ ..+++.+|+-
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~ 56 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQ 56 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESS
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecc
Confidence 33466777763456689999999999999999988 7788888974
No 123
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.19 E-value=0.00029 Score=51.45 Aligned_cols=41 Identities=15% Similarity=0.106 Sum_probs=35.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|..+..+++++| +.+++.+|. |..++.++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 106 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAK 106 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Confidence 446999999999999999999998 789999998 66665544
No 124
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.19 E-value=0.00021 Score=55.55 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=36.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++..|..+++.+|+ |.+++.++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar 118 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAK 118 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999999888889999998 77877665
No 125
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.19 E-value=0.00021 Score=55.42 Aligned_cols=43 Identities=14% Similarity=0.213 Sum_probs=37.5
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||||||+|.+++.++++.|..+++.+|+ |.+++.++
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar 136 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSK 136 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence 34568999999999999999999888899999998 77877665
No 126
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.18 E-value=0.00011 Score=51.40 Aligned_cols=48 Identities=17% Similarity=0.096 Sum_probs=37.9
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|||||||+|.++..+++... +++.+|. |..++.++
T Consensus 8 ~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~ 56 (170)
T 3i9f_A 8 EYLPNIF-EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVK 56 (170)
T ss_dssp TTHHHHH-SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHH
T ss_pred HHHHhcC-cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHH
Confidence 3455555 66678999999999999999999884 8899998 66666543
No 127
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.18 E-value=0.00031 Score=50.97 Aligned_cols=47 Identities=15% Similarity=0.063 Sum_probs=36.0
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+++.+. .....+|||||||+|.++..++++ +.+++.+|. |..++.++
T Consensus 37 ~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 84 (220)
T 3hnr_A 37 ILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAK 84 (220)
T ss_dssp HHHHHH-HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHH
T ss_pred HHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHH
Confidence 444444 445579999999999999999998 678999998 65665443
No 128
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.18 E-value=0.00047 Score=51.87 Aligned_cols=50 Identities=30% Similarity=0.442 Sum_probs=39.7
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++..+ .....+|+|||||+|.++..++++ +..+++.+|. |..++.++
T Consensus 21 ~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~ 71 (249)
T 3ftd_A 21 KKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLK 71 (249)
T ss_dssp HHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHT
T ss_pred HHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHH
Confidence 45677777 666789999999999999999987 5678899998 55555554
No 129
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.18 E-value=0.00027 Score=49.04 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=32.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.++..++++.+. ++.+|. |..++.++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~ 80 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLK 80 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHH
Confidence 4469999999999999999999776 899998 66666544
No 130
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.17 E-value=0.00018 Score=53.62 Aligned_cols=42 Identities=14% Similarity=-0.059 Sum_probs=35.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|+|||||+|.+++.+++..|..+++..|. |..++.|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~ 62 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSAL 62 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 3447999999999999999999999999999997 55665554
No 131
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.17 E-value=0.00021 Score=54.61 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=35.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|.+++.+++. |..+++.+|+ |.+++.++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar 115 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSK 115 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHH
Confidence 4579999999999999999998 8889999998 78887665
No 132
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.17 E-value=0.0013 Score=45.43 Aligned_cols=45 Identities=24% Similarity=0.184 Sum_probs=35.7
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccchH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDLPH 156 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~DlP~ 156 (168)
.+++.+.......+|||||||+|.++..+++.+ |+.+++.+|..+
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~ 57 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP 57 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc
Confidence 455555523456799999999999999999995 778999998754
No 133
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.17 E-value=0.00024 Score=55.36 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=36.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|||||+|..++.+++..|..+++.+|+ |.+++.|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar 149 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAK 149 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence 457999999999999999999888899999998 78887765
No 134
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.16 E-value=0.00066 Score=50.30 Aligned_cols=48 Identities=21% Similarity=0.317 Sum_probs=37.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++... .....+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 32 ~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~ 80 (252)
T 1wzn_A 32 EIFKEDA-KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVAR 80 (252)
T ss_dssp HHHHHTC-SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHH
Confidence 4455554 455679999999999999999987 678999998 66666543
No 135
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.15 E-value=0.00083 Score=48.40 Aligned_cols=48 Identities=10% Similarity=0.196 Sum_probs=38.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .....+|+|||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 68 ~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~ 116 (210)
T 3lbf_A 68 RMTELLE-LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQAR 116 (210)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHH
Confidence 4555666 677789999999999999999998 678899998 66666544
No 136
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.14 E-value=0.00031 Score=52.06 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=35.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|..+..+++..| ..+++.+|. |..++.++
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 102 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVAR 102 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999999998 689999998 66666554
No 137
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.14 E-value=0.00044 Score=51.94 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=32.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|+|||||+|.+++.+++..+ +++.+|. |..++.++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~ 159 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAE 159 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHH
Confidence 4457999999999999999999876 8999998 66665544
No 138
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.14 E-value=0.00031 Score=50.90 Aligned_cols=41 Identities=17% Similarity=0.162 Sum_probs=35.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|..+..+++..| +.+++.+|. |..++.++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 98 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHAR 98 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 446999999999999999999998 789999998 66666544
No 139
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.14 E-value=0.00041 Score=52.58 Aligned_cols=42 Identities=12% Similarity=-0.001 Sum_probs=36.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPSY 164 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~~ 164 (168)
....+|+|||||+|..+.++++. + .+++.+|+ |.+++.++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~ 113 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISF 113 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTT
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHH
Confidence 45579999999999999999998 8 89999998 8899988753
No 140
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.13 E-value=0.00054 Score=53.86 Aligned_cols=48 Identities=15% Similarity=0.042 Sum_probs=36.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a 161 (168)
.+.+.+. .....+|||||||+|.++..++++ +..+++.+|..+.++.+
T Consensus 41 ~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a 88 (348)
T 2y1w_A 41 AILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHA 88 (348)
T ss_dssp HHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHH
T ss_pred HHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHH
Confidence 4556565 555679999999999999998885 66789999986554443
No 141
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.12 E-value=0.00015 Score=55.71 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=36.7
Q ss_pred CCCCCeEEEecCCccHHHHHHH-HHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLV-SKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~-~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+....+|||||||+|.++..++ +.+|+.+++.+|. |..++.++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~ 160 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGAT 160 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHH
Confidence 4566899999999999999996 7799999999998 77776554
No 142
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.12 E-value=0.00064 Score=50.84 Aligned_cols=48 Identities=17% Similarity=0.267 Sum_probs=37.5
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+++..+ .....+|||||||+|.++..++++. .+++.+|. |..++.+
T Consensus 20 ~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a 68 (244)
T 1qam_A 20 DKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTT 68 (244)
T ss_dssp HHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHH
T ss_pred HHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHH
Confidence 45666666 6666899999999999999999986 67888887 5555443
No 143
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.11 E-value=0.00032 Score=51.52 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=30.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
...+|||||||+|.++..+++..+ +++.+|. |..++.+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a 80 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHA 80 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHH
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHH
Confidence 446899999999999999999887 5777887 5555544
No 144
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.10 E-value=0.00044 Score=52.88 Aligned_cols=49 Identities=10% Similarity=0.114 Sum_probs=38.0
Q ss_pred HHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 110 MKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 110 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+++.++ ... .+|||||||+|.++..++++ ..+++.+|. |..++.++
T Consensus 72 ~~~~~~~~~-~~~-~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~ 121 (299)
T 3g2m_A 72 AREFATRTG-PVS-GPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFR 121 (299)
T ss_dssp HHHHHHHHC-CCC-SCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHH
T ss_pred HHHHHHhhC-CCC-CcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHH
Confidence 345666666 333 49999999999999999998 578999998 66766554
No 145
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.10 E-value=0.00069 Score=48.90 Aligned_cols=41 Identities=12% Similarity=0.199 Sum_probs=33.3
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+....+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 82 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEAS 82 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHH
Confidence 445679999999999999999987 668999998 66665543
No 146
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.09 E-value=0.00041 Score=53.18 Aligned_cols=48 Identities=19% Similarity=0.278 Sum_probs=37.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC--CeEEEccc-hHHHhh
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ--IRGINFDL-PHVIKD 160 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~--l~~~v~Dl-P~vi~~ 160 (168)
.+++..+ .....+|||||||+|.++..++++.+. .+++.+|. |..++.
T Consensus 33 ~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~ 83 (279)
T 3uzu_A 33 AIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGR 83 (279)
T ss_dssp HHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHH
T ss_pred HHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHH
Confidence 4666676 666789999999999999999998765 45788887 444443
No 147
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.08 E-value=0.00085 Score=52.29 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=40.5
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.++..++ .....+|||||||+|.++..+++. .|+.+++.+|. |..++.|+
T Consensus 96 ~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~ 147 (336)
T 2b25_A 96 MILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAK 147 (336)
T ss_dssp HHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 4556666 667789999999999999999998 58899999998 66665543
No 148
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.07 E-value=0.00082 Score=52.05 Aligned_cols=50 Identities=12% Similarity=0.207 Sum_probs=40.0
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ-IRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-P~vi~~a~ 162 (168)
.+++..+ .....+|+|||||+|.++..+++..+. .+++.+|+ |..++.++
T Consensus 66 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~ 117 (317)
T 1dl5_A 66 LFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK 117 (317)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence 4555566 666789999999999999999999884 78999997 66666544
No 149
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.07 E-value=0.00086 Score=49.38 Aligned_cols=40 Identities=8% Similarity=0.009 Sum_probs=33.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||||||+|..++.++++.| +.+++.+|. |..++.|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 98 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAK 98 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 35999999999999999999986 789999998 66665543
No 150
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.07 E-value=0.00036 Score=51.89 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=33.8
Q ss_pred CeEEEecCCccHHHHHHHHH----CCCCeEEEccc-hHHHhhCC
Q 030988 124 NQLVDVAGGLGANISLLVSK----YPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~----~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+|||||||+|..+..+++. +|+.+++.+|. |..++.++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA 126 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh
Confidence 69999999999999999998 79999999998 66666554
No 151
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.06 E-value=0.00041 Score=51.53 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=35.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
.+..+|||||||+|..++.++++.| +.+++.+|. |..++.++
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 112 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGL 112 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 4557999999999999999999988 789999998 66666554
No 152
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.05 E-value=0.0016 Score=49.66 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=27.9
Q ss_pred CCeEEEecCCccHHHH----HHHHHCCCCeE--EEccc-hHHHhh
Q 030988 123 INQLVDVAGGLGANIS----LLVSKYPQIRG--INFDL-PHVIKD 160 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~----~l~~~~P~l~~--~v~Dl-P~vi~~ 160 (168)
..+|||||||+|.++. .++.++|+.++ +.+|. |+.++.
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~ 97 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAK 97 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHH
Confidence 4689999999997554 45667798865 89996 444443
No 153
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.05 E-value=0.00048 Score=50.39 Aligned_cols=42 Identities=7% Similarity=0.096 Sum_probs=35.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|..++.++++.| +.+++.+|. |..++.|+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 100 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQ 100 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHH
Confidence 3457999999999999999999875 889999998 66666554
No 154
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.04 E-value=0.00084 Score=49.00 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=31.9
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
.....+|||||||+|.++..+++..|.-+++.+|.-
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s 90 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYS 90 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECC
Confidence 556679999999999999999999987789999984
No 155
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.03 E-value=0.00064 Score=48.88 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=33.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++ +|..+++.+|. |..++.++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~ 100 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAE 100 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999776 67789999998 66666554
No 156
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.03 E-value=0.00014 Score=52.78 Aligned_cols=44 Identities=18% Similarity=0.165 Sum_probs=34.3
Q ss_pred HcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 116 IYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 116 ~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
... .....+|||||||+|.++..+++.. .+++.+|. |..++.++
T Consensus 46 ~~~-~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~ 90 (216)
T 3ofk_A 46 SLS-SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRAC 90 (216)
T ss_dssp HTT-TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHH
T ss_pred Hcc-cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHH
Confidence 344 5566899999999999999999985 47888998 66665543
No 157
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.02 E-value=0.0011 Score=48.39 Aligned_cols=48 Identities=10% Similarity=0.263 Sum_probs=37.5
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.+. .....+|||||||+|.++..+++.. .+++.+|. |..++.++
T Consensus 61 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~ 109 (231)
T 1vbf_A 61 FMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYAS 109 (231)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHH
Confidence 4555566 6667899999999999999999986 67888887 55555443
No 158
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.00 E-value=0.00096 Score=48.95 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=31.2
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||||||+|.++..+++. .+++.+|. |..++.++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~ 71 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQ 71 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHH
Confidence 479999999999999999887 78999998 66666543
No 159
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.00 E-value=0.00075 Score=47.43 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=29.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhh
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKD 160 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~ 160 (168)
..+|+|||||+|.++..++++. +++.+|. |..++.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES 59 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc
Confidence 4599999999999999999987 8999998 555543
No 160
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.00 E-value=0.00086 Score=53.69 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 110 MKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 110 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
+..+++.+. .....+|||||||+|.++..++++ ..+++.+|. |..++.++.
T Consensus 96 ~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~ 147 (416)
T 4e2x_A 96 ARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKARE 147 (416)
T ss_dssp HHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHT
T ss_pred HHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHH
Confidence 446677777 777789999999999999999987 458999998 556665543
No 161
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.98 E-value=0.00049 Score=50.43 Aligned_cols=40 Identities=23% Similarity=0.439 Sum_probs=33.5
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++..+ +++.+|. |..++.++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~ 79 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHAR 79 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHH
Confidence 3457999999999999999999987 7888998 76766554
No 162
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.97 E-value=0.0011 Score=48.61 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=32.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~ 76 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAE 76 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHH
Confidence 4579999999999999999998 567899998 66665543
No 163
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.97 E-value=0.0021 Score=48.56 Aligned_cols=47 Identities=21% Similarity=0.288 Sum_probs=37.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++.++ .. ..+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 60 ~~l~~~~-~~-~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~ 107 (285)
T 4htf_A 60 RVLAEMG-PQ-KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAK 107 (285)
T ss_dssp HHHHHTC-SS-CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CC-CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 4555565 33 479999999999999999998 778999998 66666554
No 164
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.96 E-value=0.00052 Score=50.65 Aligned_cols=41 Identities=10% Similarity=0.045 Sum_probs=31.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++..+. +++.+|. |..++.++
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~l~~a~ 100 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLR 100 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEE-EEEEEECCHHHHHHHH
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCC-eEEEEcCCHHHHHHHH
Confidence 34469999999999999999765443 7899998 66666554
No 165
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.96 E-value=0.00069 Score=49.35 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=33.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..++++ ..+++.+|. |..++.++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 69 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAE 69 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 34579999999999999999998 678999998 66666544
No 166
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.95 E-value=0.00055 Score=49.20 Aligned_cols=41 Identities=12% Similarity=-0.013 Sum_probs=33.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++..+. +++.+|. |..++.++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~ 82 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQ 82 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHH
Confidence 45579999999999999999998776 8899998 66665543
No 167
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.94 E-value=0.0011 Score=50.82 Aligned_cols=48 Identities=17% Similarity=0.353 Sum_probs=37.5
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+++.++ .....+|||||||+|.++..+++... +++.+|. |..++.+
T Consensus 18 ~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a 66 (285)
T 1zq9_A 18 NSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAEL 66 (285)
T ss_dssp HHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHH
Confidence 45677777 77778999999999999999999854 7788887 5555443
No 168
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=96.94 E-value=0.0005 Score=54.72 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=35.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++.+ |..+++.+|+ |..++.++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~ 125 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVAR 125 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHH
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 45799999999999999999997 8999999998 66666554
No 169
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.93 E-value=0.00058 Score=51.23 Aligned_cols=41 Identities=22% Similarity=0.400 Sum_probs=34.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|+|||||+|.++..+++.+|..+++.+|. |..++.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a 125 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAA 125 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHH
Confidence 3457999999999999999999999999999998 5555544
No 170
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.93 E-value=0.00047 Score=48.66 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=35.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
.++..+. ....+|+|||||+|.++..+++. +.+++.+|. |..++.+
T Consensus 38 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a 84 (195)
T 3cgg_A 38 RLIDAMA--PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYA 84 (195)
T ss_dssp HHHHHHS--CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred HHHHHhc--cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHH
Confidence 3555553 45679999999999999999987 568889997 5555544
No 171
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.93 E-value=0.00067 Score=50.80 Aligned_cols=42 Identities=7% Similarity=0.029 Sum_probs=35.5
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|..++.++++.| +.+++.+|. |..++.++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~ 121 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGL 121 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHH
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999999998 789999998 66666554
No 172
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.92 E-value=0.0017 Score=47.37 Aligned_cols=43 Identities=14% Similarity=0.144 Sum_probs=35.2
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHC-----CCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKY-----PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~-----P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|||||||+|.++..+++.. |+.+++.+|. |..++.++
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~ 126 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSL 126 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHH
Confidence 4556799999999999999999986 6789999998 65665543
No 173
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.92 E-value=0.00061 Score=51.73 Aligned_cols=43 Identities=16% Similarity=0.053 Sum_probs=37.2
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+....+|+|+|||+|.+++.+++..+..+++.+|. |..++.++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~ 160 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLC 160 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHH
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 45667999999999999999999999889999998 77776554
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=96.91 E-value=0.0011 Score=51.61 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhhC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKDA 161 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a 161 (168)
...+|+|||||+|.++..++++ +..+++.+|..+.++.+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a 76 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMA 76 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHH
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHH
Confidence 3469999999999999998886 55689999986555544
No 175
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.91 E-value=0.00075 Score=51.11 Aligned_cols=47 Identities=17% Similarity=0.143 Sum_probs=36.0
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+++.++ .....+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 112 ~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~ 159 (286)
T 3m70_A 112 VVDAAK-IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLN 159 (286)
T ss_dssp HHHHHH-HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHhh-ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHH
Confidence 444444 345679999999999999999998 668999998 66665543
No 176
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.90 E-value=0.001 Score=48.99 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=32.1
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccch
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDLP 155 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~DlP 155 (168)
+....+|||||||+|.++..+++.+ |..+++.+|.-
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s 111 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFS 111 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECC
Confidence 5566899999999999999999997 78899999983
No 177
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.89 E-value=0.00044 Score=51.66 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=33.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDA 161 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a 161 (168)
...+|||||||+|..++.++++.| +.+++.+|. |..++.|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a 101 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHA 101 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCS
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 457999999999999999999987 789999997 5555444
No 178
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=96.89 E-value=0.0027 Score=48.80 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=31.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|||||||+|.++..+++ .+..+++.+|. |..++.+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a 73 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQC 73 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHH
Confidence 3567999999999999999988 46778999998 5555543
No 179
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.88 E-value=0.0012 Score=50.23 Aligned_cols=42 Identities=10% Similarity=0.122 Sum_probs=32.8
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc--hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL--PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl--P~vi~~a~ 162 (168)
.....+|||||||+|.+++.+++.. ..+++.+|. |..++.++
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~ 120 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLE 120 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHH
Confidence 3445799999999999999888863 348999999 56666543
No 180
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=96.88 E-value=0.0012 Score=51.69 Aligned_cols=49 Identities=14% Similarity=0.097 Sum_probs=36.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~ 162 (168)
.+.+... .....+|||||||+|.++..++++ +..+++.+|..+.++.++
T Consensus 55 ~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~ 103 (340)
T 2fyt_A 55 FIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAM 103 (340)
T ss_dssp HHHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHH
T ss_pred HHHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHH
Confidence 3444444 555679999999999999999987 556899999865555543
No 181
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.86 E-value=0.00092 Score=47.51 Aligned_cols=40 Identities=13% Similarity=-0.066 Sum_probs=32.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.++..+++ .+..+++.+|. |..++.++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~ 84 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQRSAAVIA 84 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHH
Confidence 447999999999999998877 46668999998 66766554
No 182
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=96.85 E-value=0.0026 Score=48.65 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=33.3
Q ss_pred CCCCeEEEecCCc---cHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGL---GANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~---G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+..+|||||||+ |....-+.+.+|+.+++.+|. |.+++.++
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar 122 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQ 122 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTH
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHH
Confidence 3568999999997 334444455789999999998 89998876
No 183
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.84 E-value=0.0019 Score=47.64 Aligned_cols=48 Identities=17% Similarity=0.197 Sum_probs=38.7
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.++...+ .....+|+|+|||+|.++..++++ ..+++.+|. |..++.++
T Consensus 82 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~ 130 (248)
T 2yvl_A 82 YIALKLN-LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQ 130 (248)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHH
Confidence 4566666 667789999999999999999998 778999996 66655543
No 184
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.84 E-value=0.0012 Score=47.20 Aligned_cols=42 Identities=19% Similarity=0.106 Sum_probs=33.8
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|+|+|||+|.++..+++. +..+++.+|. |..++.++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~ 91 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAK 91 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHH
Confidence 345579999999999999999987 5567999998 66666543
No 185
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.84 E-value=0.0028 Score=47.08 Aligned_cols=41 Identities=15% Similarity=0.253 Sum_probs=31.7
Q ss_pred HHHHHcCCCC-CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 112 KILEIYKGFE-EINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 112 ~~~~~~~~~~-~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.+++.++ .. ...+|||||||+|.++..++++ ...+++.+|.
T Consensus 27 ~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDi 68 (232)
T 3opn_A 27 KALKEFH-LEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDV 68 (232)
T ss_dssp HHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECS
T ss_pred HHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcC
Confidence 4555565 33 3469999999999999999987 3348999997
No 186
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.83 E-value=0.00096 Score=50.41 Aligned_cols=48 Identities=17% Similarity=0.232 Sum_probs=37.2
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+++..+ .....+|+|||||+|.++..++++. .+++.+|. |..++.+
T Consensus 19 ~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~ 67 (255)
T 3tqs_A 19 QKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFL 67 (255)
T ss_dssp HHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHH
Confidence 45677777 6777899999999999999999985 57888887 4444433
No 187
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.81 E-value=0.00079 Score=48.22 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=31.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||||||+|.++..++++ +.+++.+|. |..++.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~ 80 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELAR 80 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHH
Confidence 479999999999999999998 568899998 66666544
No 188
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.81 E-value=0.00077 Score=53.50 Aligned_cols=40 Identities=13% Similarity=-0.032 Sum_probs=35.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+||| |+|.+++.+++..|+.+++.+|+ |..++.++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~ 212 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIE 212 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 347999999 99999999999999999999999 88888765
No 189
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.80 E-value=0.00068 Score=50.55 Aligned_cols=49 Identities=14% Similarity=0.283 Sum_probs=39.0
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++..+ .....+|||||||+|.++..+++.. .+++.+|. |..++.++
T Consensus 19 ~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~ 68 (245)
T 1yub_A 19 NQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSS 68 (245)
T ss_dssp HHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSS
T ss_pred HHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHH
Confidence 35666676 6666799999999999999999985 78899998 55665554
No 190
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=96.79 E-value=0.0012 Score=48.46 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=33.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
....+|||||||+|.++..+++. +.+++.+|. |..++.++.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~ 93 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKE 93 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHh
Confidence 34579999999999999999998 668999998 666665543
No 191
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.79 E-value=0.001 Score=49.06 Aligned_cols=41 Identities=17% Similarity=0.144 Sum_probs=34.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|..++.+++..| +.+++.+|. |..++.++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 114 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAK 114 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 346999999999999999999988 789999998 66665544
No 192
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.79 E-value=0.0032 Score=47.03 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=32.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~ 93 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAR 93 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 5579999999999999999987 568999998 66665443
No 193
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.78 E-value=0.00095 Score=48.93 Aligned_cols=40 Identities=18% Similarity=0.340 Sum_probs=33.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 87 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLAR 87 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHH
Confidence 34579999999999999999998 678999998 66666543
No 194
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.77 E-value=0.0007 Score=49.98 Aligned_cols=40 Identities=15% Similarity=0.118 Sum_probs=33.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..++++. ..+++.+|. |..++.++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~ 119 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAK 119 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHH
Confidence 46799999999999999999887 568899998 66666543
No 195
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.77 E-value=0.0021 Score=49.62 Aligned_cols=46 Identities=11% Similarity=0.135 Sum_probs=35.9
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHh
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIK 159 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~ 159 (168)
..+++..+ .....+|||||||+|.++..++++ ..+++.+|. |..++
T Consensus 40 ~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~ 86 (295)
T 3gru_A 40 NKAVESAN-LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEP 86 (295)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHH
T ss_pred HHHHHhcC-CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHH
Confidence 35667776 666789999999999999999998 567788886 44443
No 196
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.76 E-value=0.00098 Score=48.13 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=30.6
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+|||+|||+|.++..++++.+ .+++.+|. |..++.++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~ 93 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLK 93 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHH
T ss_pred CeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHH
Confidence 6899999999999999887643 57899998 56666554
No 197
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.74 E-value=0.00091 Score=49.13 Aligned_cols=46 Identities=13% Similarity=0.243 Sum_probs=34.7
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
++.... ++. .+|||||||+|.++..+++ +..+++.+|. |..++.++
T Consensus 59 ~~~~~~-~~~-~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~ 105 (235)
T 3lcc_A 59 LVDTSS-LPL-GRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKAN 105 (235)
T ss_dssp HHHTTC-SCC-EEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHH
T ss_pred HHHhcC-CCC-CCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHH
Confidence 344344 444 4999999999999999976 6778999998 66666543
No 198
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=96.73 E-value=0.0017 Score=48.87 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=35.9
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++..+ .....+|||||||+|.++. +. +.+..+++.+|+ |..++.++
T Consensus 11 ~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~ 60 (252)
T 1qyr_A 11 DSIVSAIN-PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQ 60 (252)
T ss_dssp HHHHHHHC-CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHH
Confidence 45666666 6666799999999999999 54 555545888887 55555544
No 199
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.72 E-value=0.0024 Score=45.86 Aligned_cols=42 Identities=12% Similarity=-0.054 Sum_probs=32.8
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|+|+|||+|.++..+++..+ -+++.+|. |..++.++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~ 89 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLI 89 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHH
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHH
Confidence 34457999999999999999998743 37899998 66666543
No 200
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.71 E-value=0.0011 Score=47.83 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=30.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+|||+|||+|.+++.++++.. -+++.+|. |..++.++
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~ 94 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLI 94 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHH
Confidence 6999999999999999887753 38899998 66666554
No 201
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.71 E-value=0.00094 Score=55.96 Aligned_cols=39 Identities=18% Similarity=0.104 Sum_probs=33.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||.|.++..+++. +.+++.+|+ |..|+.|+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~ 105 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCR 105 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHH
Confidence 4469999999999999999998 788999998 66676654
No 202
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.70 E-value=0.0013 Score=47.89 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=34.5
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a 161 (168)
.....+|||||||+|.++..+++.. |..+++.+|. |..++.+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a 118 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS 118 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHH
Confidence 3455799999999999999999885 7789999998 6666554
No 203
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.70 E-value=0.0016 Score=47.64 Aligned_cols=36 Identities=6% Similarity=-0.012 Sum_probs=31.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccch
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDLP 155 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~DlP 155 (168)
+....+|+|+|||+|.++..+++.. |..+++.+|.-
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s 107 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFS 107 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECC
Confidence 5556799999999999999999885 67889999983
No 204
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.70 E-value=0.0013 Score=48.07 Aligned_cols=42 Identities=5% Similarity=0.044 Sum_probs=35.0
Q ss_pred CCCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGG-LGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg-~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.....+|+||||| +|.++..+++.. ..+++.+|. |..++.++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~ 96 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYAR 96 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHH
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHH
Confidence 4566899999999 999999999987 788999998 66666543
No 205
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.68 E-value=0.0031 Score=47.60 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=32.5
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++. +..+++.+|. |..++.++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~ 104 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDAR 104 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHH
Confidence 45579999999999999998776 5668999998 56665443
No 206
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.66 E-value=0.0015 Score=50.33 Aligned_cols=48 Identities=19% Similarity=0.317 Sum_probs=37.3
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+++..+ .....+|||||||+|.++..++++ ..+++.+|. |..++.+
T Consensus 32 ~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a 80 (299)
T 2h1r_A 32 DKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEV 80 (299)
T ss_dssp HHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHH
Confidence 35666666 666789999999999999999987 457888887 5555443
No 207
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=96.66 E-value=0.0012 Score=49.58 Aligned_cols=39 Identities=5% Similarity=0.038 Sum_probs=32.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|||||||+|..+..+++. ..+++.+|+ |..++.|
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a 106 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREF 106 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHH
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHH
Confidence 35579999999999999999987 679999998 6666655
No 208
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.66 E-value=0.0013 Score=50.09 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=34.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+...+|+|+|||+|.+++.+++..+. +++.+|. |..++.++
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~ 165 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLV 165 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHH
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHH
Confidence 44579999999999999999999887 8999998 66666543
No 209
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=96.65 E-value=0.0011 Score=52.23 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=32.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~ 162 (168)
...+|||||||+|.++..++++ +..+++.+|..+.++.|+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~ 105 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAV 105 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHH
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHH
Confidence 4479999999999999999997 777999999876555543
No 210
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.61 E-value=0.0031 Score=48.04 Aligned_cols=45 Identities=18% Similarity=0.144 Sum_probs=34.4
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHh
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIK 159 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~ 159 (168)
..+++..+ .... +|||||||+|.++..++++. .+++.+|. |..++
T Consensus 37 ~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~ 82 (271)
T 3fut_A 37 RRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRP 82 (271)
T ss_dssp HHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHH
T ss_pred HHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHH
Confidence 35667776 6666 99999999999999999985 56777776 44443
No 211
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.60 E-value=0.0013 Score=48.41 Aligned_cols=39 Identities=28% Similarity=0.335 Sum_probs=32.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||||||+|.++..+++.. .+++.+|. |..++.++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~ 117 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALAR 117 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHH
Confidence 44799999999999999999974 88999998 66666543
No 212
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.60 E-value=0.0028 Score=50.64 Aligned_cols=49 Identities=8% Similarity=0.138 Sum_probs=37.0
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a 161 (168)
.+++.++ .....+|+|+|||+|.++.++++++ +..+++.+|. |..++.|
T Consensus 30 ~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a 80 (421)
T 2ih2_A 30 FMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 80 (421)
T ss_dssp HHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC
T ss_pred HHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC
Confidence 4455555 4445699999999999999999987 7788999997 4444443
No 213
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.59 E-value=0.0015 Score=51.82 Aligned_cols=43 Identities=14% Similarity=0.009 Sum_probs=36.4
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
|....+|+|+|||+|.+++.+++..+..+++.+|. |..++.|+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~ 258 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAE 258 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHH
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHH
Confidence 45667999999999999999999998778999998 66666554
No 214
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=96.57 E-value=0.0016 Score=51.59 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=36.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
...++|+|||||.|.+++++++..| .+++++|+ |.|++.++.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~ 229 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKK 229 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHH
Confidence 3568999999999999999998765 78999998 889888763
No 215
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=96.57 E-value=0.0014 Score=46.82 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=30.1
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+|||||||+|.++..+++. ..+++.+|. |..++.++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 68 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAK 68 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHH
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 9999999999999999987 568999998 55655443
No 216
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=96.54 E-value=0.0029 Score=48.27 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=31.8
Q ss_pred CCeEEEecCCccH----HHHHHHHHCC----CCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGA----NISLLVSKYP----QIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~----~~~~l~~~~P----~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|+|+|||+|. +++.+++..| +.+++..|+ |.+++.|+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar 154 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKAR 154 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHH
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHH
Confidence 4689999999998 5666777756 468899998 77887765
No 217
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.46 E-value=0.0025 Score=46.62 Aligned_cols=42 Identities=12% Similarity=0.241 Sum_probs=33.3
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCC------CCeEEEccc-hHHHhhC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYP------QIRGINFDL-PHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P------~l~~~v~Dl-P~vi~~a 161 (168)
.....+|+|||||+|.++..+++..+ ..+++.+|. |..++.+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a 130 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRS 130 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHH
Confidence 45557999999999999999998765 368899997 5555544
No 218
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.36 E-value=0.0065 Score=44.05 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=25.4
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+|||||||+|.++..+++. +.+|. |..++.+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a 81 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIA 81 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHH
Confidence 579999999999999988765 77776 4454443
No 219
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.36 E-value=0.0028 Score=49.09 Aligned_cols=48 Identities=15% Similarity=0.100 Sum_probs=37.6
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHhhC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIKDA 161 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~~a 161 (168)
++...+ .....+|+|+|||+|..+..+++..+ ..+++.+|. |..++.+
T Consensus 110 ~~~~l~-~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a 159 (315)
T 1ixk_A 110 PPVALD-PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRET 159 (315)
T ss_dssp HHHHHC-CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHH
T ss_pred HHHHhC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHH
Confidence 445556 66668999999999999999999975 478999997 5545443
No 220
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.36 E-value=0.0026 Score=55.60 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=35.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||||||+|.++..+++.. |..+++.+|+ |..++.|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AR 763 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAA 763 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHH
Confidence 355799999999999999999998 5679999998 66666653
No 221
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.34 E-value=0.0082 Score=46.20 Aligned_cols=41 Identities=15% Similarity=0.250 Sum_probs=32.5
Q ss_pred HHHHHcCCCC-CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 112 KILEIYKGFE-EINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 112 ~~~~~~~~~~-~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.+++.+. .. ...+++|||||+|.++..+++. +.-+++.+|.
T Consensus 75 ~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDv 116 (291)
T 3hp7_A 75 KALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDV 116 (291)
T ss_dssp HHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECS
T ss_pred HHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEEC
Confidence 4566666 44 3469999999999999988886 5568899997
No 222
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.33 E-value=0.0049 Score=44.43 Aligned_cols=38 Identities=18% Similarity=-0.011 Sum_probs=26.8
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
+++.+.......+|||||||+|.++..+. .+++.+|..
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s 95 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR-----NPVHCFDLA 95 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESS
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCC
Confidence 44444323455799999999999988873 567777753
No 223
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.25 E-value=0.0007 Score=51.52 Aligned_cols=40 Identities=20% Similarity=0.139 Sum_probs=34.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhh
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKD 160 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~ 160 (168)
....+|+|||||.|.++..+...+|..+.+.+|. +.-++.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~ 171 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGF 171 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHH
Confidence 4478999999999999999999999999999998 444443
No 224
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=96.24 E-value=0.0025 Score=45.65 Aligned_cols=40 Identities=10% Similarity=0.095 Sum_probs=29.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|||||||+|.++..++.. +..+++.+|. |..++.+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a 62 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKA 62 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHH
Confidence 34579999999999986655543 6779999998 5555544
No 225
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.23 E-value=0.0082 Score=46.23 Aligned_cols=39 Identities=13% Similarity=0.090 Sum_probs=29.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||||||+|..+..+++. ...+++.+|+ |..++.|+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~ 88 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGN 88 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHH
T ss_pred CCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHH
Confidence 479999999999877776654 3468999998 56666654
No 226
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.21 E-value=0.0044 Score=46.56 Aligned_cols=93 Identities=11% Similarity=0.041 Sum_probs=54.7
Q ss_pred ccCCcchHHHhcCCchhHhhcC-CCc--hhH-HhHh----cHHHHHHHHHHHHHhh--HHHHHHHHHH----cCCCCCCC
Q 030988 59 DPWYHLKDCLLEGTLPFMKAHN-AKN--PFE-YAMK----AARRRNLFNQSMHNHA--ALVMKKILEI----YKGFEEIN 124 (168)
Q Consensus 59 ~~~~~L~~~l~~g~~~~~~~~g-~~~--~~e-~~~~----~p~~~~~f~~~m~~~~--~~~~~~~~~~----~~~~~~~~ 124 (168)
......+++++.-+....+.+| -.+ -|+ ++.+ ++ .+.|+... +...+.+-.. ++ +....
T Consensus 35 ~~~~~~~~a~k~~k~~LH~i~ga~~~~~~~~~~l~~~~~~d~------~~~l~~H~STrerLp~ld~fY~~i~~-~~~p~ 107 (253)
T 3frh_A 35 GRHKSPKQTVEAARTRLHGICGAYVTPESLKAAAAALSAGDV------KKALSLHASTKERLAELDTLYDFIFS-AETPR 107 (253)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHTTCH------HHHHTTSHHHHHHGGGHHHHHHHHTS-SCCCS
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHhccCCH------HHHHhhCCCHHHHhhhHHHHHHHHhc-CCCCC
Confidence 3456777777655555555665 111 111 1111 22 24454432 2223333333 34 44578
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
+|+|||||.|.++..+. |..+.+.+|. +..++.+
T Consensus 108 ~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~a 142 (253)
T 3frh_A 108 RVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVI 142 (253)
T ss_dssp EEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHH
T ss_pred eEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHH
Confidence 99999999999999988 9999999998 4455443
No 227
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=96.21 E-value=0.0053 Score=48.74 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=32.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhhC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a 161 (168)
.....+|||||||+|.++..++++. ..+++.+|....++.+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a 101 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHA 101 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHH
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHH
Confidence 4556899999999999999999973 3488888886544443
No 228
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.19 E-value=0.0061 Score=46.14 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=36.2
Q ss_pred HHcCCCCCCCeEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHHhh
Q 030988 115 EIYKGFEEINQLVDVAGGLGANISLLVSKYPQ-IRGINFDL-PHVIKD 160 (168)
Q Consensus 115 ~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-P~vi~~ 160 (168)
...+ .....+|+|+|||+|..+..+++..++ .+++.+|. |..++.
T Consensus 77 ~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~ 123 (274)
T 3ajd_A 77 IVLN-PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKA 123 (274)
T ss_dssp HHHC-CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHH
T ss_pred HHhC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHH
Confidence 3445 556679999999999999999999887 78999998 444544
No 229
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=96.13 E-value=0.0022 Score=48.68 Aligned_cols=39 Identities=15% Similarity=0.016 Sum_probs=28.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
...+|||||||+|.++ .++...+..+++.+|+ |..++.+
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a 110 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQEL 110 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHH
Confidence 4479999999999944 3444445669999998 5566543
No 230
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.12 E-value=0.008 Score=44.77 Aligned_cols=49 Identities=18% Similarity=0.272 Sum_probs=37.8
Q ss_pred HHHHHcCC--CCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhh
Q 030988 112 KILEIYKG--FEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKD 160 (168)
Q Consensus 112 ~~~~~~~~--~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~ 160 (168)
.++..++. ++.-.+|+|+|||+|.++..+++.- |+=+++.+|. |..++.
T Consensus 65 ~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~ 117 (233)
T 4df3_A 65 ALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRD 117 (233)
T ss_dssp HHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHH
T ss_pred HHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHH
Confidence 34444432 6677899999999999999999874 8889999997 555543
No 231
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.11 E-value=0.0067 Score=45.95 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=29.1
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHH
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~v 157 (168)
+....+|||||||+|.++..+++. -+++.+|+-+.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m 106 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTL 106 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchh
Confidence 556679999999999999999887 57888888443
No 232
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.09 E-value=0.0077 Score=48.71 Aligned_cols=48 Identities=15% Similarity=0.294 Sum_probs=37.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++..+ .....+|+|+|||+|.++..+++. ..+++.+|. |..++.|+
T Consensus 277 ~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~ 325 (433)
T 1uwv_A 277 RALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQ 325 (433)
T ss_dssp HHHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHH
T ss_pred HHHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHH
Confidence 3445555 556679999999999999999987 678899998 66666543
No 233
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.07 E-value=0.0064 Score=46.36 Aligned_cols=35 Identities=17% Similarity=0.074 Sum_probs=29.1
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHH
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~v 157 (168)
+....+|||||||+|.++..++++ -+++.+|+-+.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m 114 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTL 114 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchh
Confidence 556679999999999999999987 57888888443
No 234
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=95.92 E-value=0.0073 Score=48.19 Aligned_cols=32 Identities=16% Similarity=0.078 Sum_probs=26.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKY 144 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~ 144 (168)
.++.... |.....|+|++||+|.++++.+..-
T Consensus 186 ~ll~~~~-~~~~~~vlDp~CGSGt~lieaa~~~ 217 (385)
T 3ldu_A 186 GLIYLTP-WKAGRVLVDPMCGSGTILIEAAMIG 217 (385)
T ss_dssp HHHHTSC-CCTTSCEEETTCTTCHHHHHHHHHH
T ss_pred HHHHhhC-CCCCCeEEEcCCCCCHHHHHHHHHH
Confidence 4556566 8877899999999999999988764
No 235
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.91 E-value=0.0066 Score=46.79 Aligned_cols=43 Identities=12% Similarity=0.110 Sum_probs=37.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
...++|+=||||.|..++++++..|.-+++++|+ |.|++.++.
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~ 125 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQ 125 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHh
Confidence 4568999999999999999999777778999998 889987764
No 236
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.90 E-value=0.0085 Score=47.97 Aligned_cols=35 Identities=9% Similarity=-0.030 Sum_probs=28.2
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ 146 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~ 146 (168)
..++.... |.....|+|.+||+|.++++.+....+
T Consensus 191 a~ll~l~~-~~~~~~vlDp~CGSGt~~ieaa~~~~~ 225 (393)
T 3k0b_A 191 AALVLLTS-WHPDRPFYDPVCGSGTIPIEAALIGQN 225 (393)
T ss_dssp HHHHHHSC-CCTTSCEEETTCTTSHHHHHHHHHHTT
T ss_pred HHHHHHhC-CCCCCeEEEcCCCCCHHHHHHHHHhcC
Confidence 35666666 888889999999999999998876554
No 237
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=95.85 E-value=0.0046 Score=49.32 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=28.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhhCC
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKDAP 162 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~ 162 (168)
++|||||||+|.+++..+++-. -+++.+|.-+.++.|+
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~~~~~a~ 122 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGA-RRVYAVEASAIWQQAR 122 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-SEEEEEECSTTHHHHH
T ss_pred CEEEEeCCCccHHHHHHHHhCC-CEEEEEeChHHHHHHH
Confidence 6899999999999988777633 3688888755555443
No 238
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=95.84 E-value=0.0013 Score=48.84 Aligned_cols=40 Identities=15% Similarity=0.024 Sum_probs=32.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|||||||+|.++..+++..+ .+++.+|. |..++.+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a 95 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWEL 95 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHH
Confidence 4457999999999999999988876 57899998 5555554
No 239
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=95.79 E-value=0.013 Score=44.91 Aligned_cols=50 Identities=18% Similarity=0.227 Sum_probs=41.5
Q ss_pred HHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 110 MKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 110 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+++.++ ......+||.++|.|.++.+++++ +.+++.+|. |..++.++
T Consensus 11 l~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~ 61 (285)
T 1wg8_A 11 YQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAK 61 (285)
T ss_dssp HHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 346777777 777789999999999999999998 789999998 66766553
No 240
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.77 E-value=0.0071 Score=47.30 Aligned_cols=39 Identities=13% Similarity=0.037 Sum_probs=31.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|||+|||+|.+++.+++... +++.+|. |..++.++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~ 192 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAK 192 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHH
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHH
Confidence 346999999999999999999744 8999998 66666543
No 241
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=95.71 E-value=0.0058 Score=48.75 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=32.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.++..+++. +.+++.+|. |..++.++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~ 272 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQ 272 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHH
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHH
Confidence 3469999999999999999998 568999997 66666544
No 242
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=95.70 E-value=0.0035 Score=47.05 Aligned_cols=40 Identities=13% Similarity=0.002 Sum_probs=27.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
....+|||||||+|.++..+++..- -+++.+|. |..++.+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a 94 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREEL 94 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHH
Confidence 3447899999999988766554421 25888998 5555543
No 243
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=95.64 E-value=0.0088 Score=45.10 Aligned_cols=41 Identities=20% Similarity=0.231 Sum_probs=31.9
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchH
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPH 156 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~ 156 (168)
+..... .....+|||+|||+|.+++.+++. ..+++.+|.-+
T Consensus 75 l~~a~~-~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~ 115 (258)
T 2r6z_A 75 IAKAVN-HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHP 115 (258)
T ss_dssp HHHHTT-GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCH
T ss_pred HHHHhC-cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECCh
Confidence 333344 455579999999999999999986 56899999844
No 244
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=95.61 E-value=0.0095 Score=48.41 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=36.8
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHHh
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ-IRGINFDL-PHVIK 159 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-P~vi~ 159 (168)
++...+ .....+|+|+|||+|..+..+++..++ .+++.+|. |..++
T Consensus 251 ~~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~ 298 (450)
T 2yxl_A 251 ASIVLD-PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMK 298 (450)
T ss_dssp HHHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHH
T ss_pred HHHhcC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHH
Confidence 344555 566679999999999999999999987 78999997 44443
No 245
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=95.53 E-value=0.007 Score=43.39 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=30.6
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCC-eEEEccc-hHHHhhC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQI-RGINFDL-PHVIKDA 161 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l-~~~v~Dl-P~vi~~a 161 (168)
++..+. ....+|+|||||+|.++..+ .. +++.+|. |..++.+
T Consensus 29 ~l~~~~--~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a 72 (211)
T 2gs9_A 29 ALKGLL--PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVG 72 (211)
T ss_dssp HHHTTC--CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHH
T ss_pred HHHHhc--CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHH
Confidence 444444 25579999999999998887 45 8899997 5555543
No 246
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=95.48 E-value=0.015 Score=46.49 Aligned_cols=35 Identities=14% Similarity=0.006 Sum_probs=28.0
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ 146 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~ 146 (168)
..++.... |.....|+|.+||+|.++++.+....+
T Consensus 184 aall~l~~-~~~~~~llDp~CGSGt~lIEAa~~a~~ 218 (384)
T 3ldg_A 184 AAIILLSN-WFPDKPFVDPTCGSGTFCIEAAMIGMN 218 (384)
T ss_dssp HHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTT
T ss_pred HHHHHHhC-CCCCCeEEEeCCcCCHHHHHHHHHhcC
Confidence 34566666 888889999999999999998876554
No 247
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.34 E-value=0.025 Score=41.98 Aligned_cols=44 Identities=14% Similarity=0.146 Sum_probs=34.0
Q ss_pred HHHHHcCC--CCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccch
Q 030988 112 KILEIYKG--FEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDLP 155 (168)
Q Consensus 112 ~~~~~~~~--~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~DlP 155 (168)
.++..++. +....+|+|+|||+|.++..+++. -|+-+++.+|.-
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s 110 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFS 110 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECC
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECc
Confidence 34444432 566789999999999999999876 467889999983
No 248
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=95.23 E-value=0.014 Score=46.40 Aligned_cols=39 Identities=10% Similarity=-0.021 Sum_probs=33.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+|+|+|+|+|..++.++++.|..+++..|. |..++.+
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a 87 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELM 87 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 36899999999999999999999889999998 6555544
No 249
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.18 E-value=0.036 Score=43.36 Aligned_cols=61 Identities=13% Similarity=0.193 Sum_probs=44.6
Q ss_pred HHHHHHHhhHHHHHHHHHHc-CCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHHhh
Q 030988 98 FNQSMHNHAALVMKKILEIY-KGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVIKD 160 (168)
Q Consensus 98 f~~~m~~~~~~~~~~~~~~~-~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~ 160 (168)
+++++...+... +.+++.| . -.+..+||.+|||.......+...+|+++.+=+|+|+|++.
T Consensus 74 in~g~~~Rt~~i-D~~v~~fl~-~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~ 135 (334)
T 1rjd_A 74 MNYGTYLRTVGI-DAAILEFLV-ANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVEL 135 (334)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHH-HCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHH-HCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHH
Confidence 445544444433 3333333 2 13568999999999999999999999999999999999874
No 250
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.10 E-value=0.0075 Score=47.11 Aligned_cols=41 Identities=15% Similarity=0.224 Sum_probs=33.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCC-----CeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQ-----IRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~-----l~~~v~Dl-P~vi~~a 161 (168)
....+|+|+|||+|.++..+++..|. .+++.+|+ |..++.|
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a 175 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLA 175 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHH
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHH
Confidence 34579999999999999999998875 67899998 6555544
No 251
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.10 E-value=0.013 Score=45.25 Aligned_cols=32 Identities=13% Similarity=-0.037 Sum_probs=26.7
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
+....+|||||||+|.++..++++ -+++.+|.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~ 111 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKG 111 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEec
Confidence 455579999999999999999987 36777777
No 252
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=95.01 E-value=0.026 Score=43.09 Aligned_cols=47 Identities=17% Similarity=0.095 Sum_probs=34.9
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 107 ALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.+....+.+.|- +....+|||+|||+|.++.-+++..|-.+++-+|+
T Consensus 76 AfKL~ei~eK~~-Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~Gvdv 122 (282)
T 3gcz_A 76 SAKLRWMEERGY-VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTL 122 (282)
T ss_dssp HHHHHHHHHTTS-CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred HHHHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEe
Confidence 344456667775 77777999999999999998887776555555554
No 253
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=94.97 E-value=0.043 Score=44.21 Aligned_cols=46 Identities=9% Similarity=0.238 Sum_probs=36.9
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHh
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIK 159 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~ 159 (168)
++...+ .....+|+|+|||+|..+..+++..|+.+++.+|. |..++
T Consensus 238 ~~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~ 284 (429)
T 1sqg_A 238 CMTWLA-PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLS 284 (429)
T ss_dssp HHHHHC-CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHH
T ss_pred HHHHcC-CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 444555 55667999999999999999999999988999997 43333
No 254
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=94.87 E-value=0.025 Score=45.04 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=27.4
Q ss_pred CCeEEEecCCccHHHHHH--------HHHC-------CCCeEEEccchH
Q 030988 123 INQLVDVAGGLGANISLL--------VSKY-------PQIRGINFDLPH 156 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l--------~~~~-------P~l~~~v~DlP~ 156 (168)
.-+|+|+|||+|..+..+ .+++ |++++..-|||.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ 101 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPS 101 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTT
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCc
Confidence 478999999999876665 4444 889999999984
No 255
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=94.64 E-value=0.033 Score=44.89 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=27.2
Q ss_pred CCCeEEEecCC------ccHHHHHHHHH-CCCCeEEEccch
Q 030988 122 EINQLVDVAGG------LGANISLLVSK-YPQIRGINFDLP 155 (168)
Q Consensus 122 ~~~~vvDvGGg------~G~~~~~l~~~-~P~l~~~v~DlP 155 (168)
...+||||||| +|..++.++++ +|+.+++.+|+-
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiS 256 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIM 256 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECC
Confidence 34799999999 66666676665 699999999983
No 256
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=94.61 E-value=0.021 Score=43.55 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|||+|||+|.+++.++++ ...+++.+|+ |..++.++
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~ 165 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLV 165 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHH
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHH
Confidence 44579999999999999999886 4568999998 66666543
No 257
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=94.61 E-value=0.02 Score=45.78 Aligned_cols=38 Identities=13% Similarity=0.008 Sum_probs=30.7
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||+|||+|.+++.+++.. .+++.+|+ |..++.++
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~ 253 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLD 253 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHH
Confidence 5799999999999999999974 44899998 55555443
No 258
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=94.56 E-value=0.022 Score=45.88 Aligned_cols=37 Identities=32% Similarity=0.483 Sum_probs=30.3
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
..+|+|+|||+|..++.+++. ..+++.+|. |..++.+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~A 131 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAA 131 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHH
Confidence 479999999999999999887 468899997 5555544
No 259
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=94.50 E-value=0.063 Score=40.48 Aligned_cols=43 Identities=19% Similarity=0.207 Sum_probs=34.8
Q ss_pred HHHHHHcCCCCCC--CeEEEecCCccHHHHHHHHHCCCCeEEEccchH
Q 030988 111 KKILEIYKGFEEI--NQLVDVAGGLGANISLLVSKYPQIRGINFDLPH 156 (168)
Q Consensus 111 ~~~~~~~~~~~~~--~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~ 156 (168)
..+++... .... .+|||++||+|..+..++++ ..+++.+|.-+
T Consensus 76 e~l~~al~-l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~ 120 (258)
T 2oyr_A 76 EAVAKAVG-IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNP 120 (258)
T ss_dssp SHHHHHTT-CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCH
T ss_pred HHHHHHhc-ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCH
Confidence 35666665 6555 79999999999999999998 56899999844
No 260
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=94.46 E-value=0.049 Score=44.54 Aligned_cols=46 Identities=9% Similarity=0.080 Sum_probs=36.0
Q ss_pred HHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHHhh
Q 030988 114 LEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ-IRGINFDL-PHVIKD 160 (168)
Q Consensus 114 ~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-P~vi~~ 160 (168)
+...+ .....+|||+|||+|..+..+++..++ .+++.+|. |.-++.
T Consensus 94 a~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~ 141 (464)
T 3m6w_A 94 GVLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRG 141 (464)
T ss_dssp HHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHH
T ss_pred HHhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHH
Confidence 34445 556679999999999999999999876 68899997 444443
No 261
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=94.32 E-value=0.03 Score=44.58 Aligned_cols=40 Identities=20% Similarity=0.108 Sum_probs=32.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.++..+++. +..+++.+|. |..++.++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~ 257 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAK 257 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHH
Confidence 4579999999999999999986 4458899998 66665543
No 262
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.28 E-value=0.027 Score=43.95 Aligned_cols=39 Identities=21% Similarity=0.242 Sum_probs=31.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
....+|+|+|||+|.+++. ++ ...+++.+|. |..++.++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~ 233 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLK 233 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999 77 4778999998 76766554
No 263
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=94.27 E-value=0.023 Score=45.06 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=32.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.+++.+++. ..+++.+|. |..++.++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~ 248 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAE 248 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHH
Confidence 4569999999999999999998 567899998 66666554
No 264
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=94.25 E-value=0.04 Score=43.92 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=35.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAPS 163 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~~ 163 (168)
..++|+=||||.|..++++++ ||.-+++++|+ |.|++.++.
T Consensus 205 ~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~ 246 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKK 246 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHh
Confidence 457899999999999999998 56678999998 889988764
No 265
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=94.22 E-value=0.028 Score=44.73 Aligned_cols=40 Identities=8% Similarity=-0.117 Sum_probs=31.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.+++.+++.. .-+++.+|. |..++.|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~ 252 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSL 252 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHH
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHH
Confidence 34799999999999999999863 237899997 66666543
No 266
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=94.19 E-value=0.054 Score=41.23 Aligned_cols=38 Identities=11% Similarity=-0.022 Sum_probs=28.0
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeE
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRG 149 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~ 149 (168)
..+.+..- +....+|||+|||+|.++.-+++..+.-++
T Consensus 64 ~ei~ek~~-l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v 101 (277)
T 3evf_A 64 RWFHERGY-VKLEGRVIDLGCGRGGWCYYAAAQKEVSGV 101 (277)
T ss_dssp HHHHHTTS-SCCCEEEEEETCTTCHHHHHHHTSTTEEEE
T ss_pred HHHHHhCC-CCCCCEEEEecCCCCHHHHHHHHhcCCCcc
Confidence 34555544 666679999999999999988877654443
No 267
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.17 E-value=0.041 Score=44.47 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=31.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.+++.+++. ..+++.+|. |..++.|+
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~ 329 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMAR 329 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHH
Confidence 4469999999999999999986 457888887 56665543
No 268
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=94.15 E-value=0.032 Score=44.45 Aligned_cols=40 Identities=10% Similarity=-0.008 Sum_probs=31.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...+|+|+|||+|.+++.+++.. ..+++.+|. |..++.++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~ 260 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIAR 260 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHH
Confidence 34699999999999999999874 457899998 66665543
No 269
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.14 E-value=0.032 Score=45.18 Aligned_cols=50 Identities=16% Similarity=0.087 Sum_probs=36.5
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-------------CCCeEEEccc-hHHHhhC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKY-------------PQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-------------P~l~~~v~Dl-P~vi~~a 161 (168)
..+++... .....+|+|.|||+|.++..+++.. +..+++.+|+ |..++.|
T Consensus 161 ~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA 224 (445)
T 2okc_A 161 QAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLA 224 (445)
T ss_dssp HHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHH
T ss_pred HHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHH
Confidence 34555555 4455799999999999999988763 4567888887 6665544
No 270
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=94.08 E-value=0.096 Score=41.26 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=33.2
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
+++..+ ..+ .+|+|+|||+|.+++.+++.. -+++.+|. |..++.|+
T Consensus 206 ~~~~~~-~~~-~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~ 252 (369)
T 3bt7_A 206 ALDVTK-GSK-GDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQ 252 (369)
T ss_dssp HHHHTT-TCC-SEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHH
T ss_pred HHHHhh-cCC-CEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHH
Confidence 444444 433 679999999999999988853 47888887 55665543
No 271
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.83 E-value=0.064 Score=46.08 Aligned_cols=32 Identities=16% Similarity=0.070 Sum_probs=26.0
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHH
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSK 143 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~ 143 (168)
..++.... |.....|+|.+||+|.++++.+..
T Consensus 180 a~ll~~~~-~~~~~~llDP~CGSGt~lIeAa~~ 211 (703)
T 3v97_A 180 AAIVMRSG-WQPGTPLLDPMCGSGTLLIEAAML 211 (703)
T ss_dssp HHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHH
T ss_pred HHHHHhhC-CCCCCeEEecCCCCcHHHHHHHHH
Confidence 34566666 887789999999999999987765
No 272
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.69 E-value=0.046 Score=43.62 Aligned_cols=33 Identities=24% Similarity=0.137 Sum_probs=28.0
Q ss_pred CCeEEEecCCccHHHHHHHHH-----------------CCCCeEEEccch
Q 030988 123 INQLVDVAGGLGANISLLVSK-----------------YPQIRGINFDLP 155 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~-----------------~P~l~~~v~DlP 155 (168)
.-+|+|+||++|..+..+... .|+++++.-|||
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 578999999999888777665 588999999999
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=93.46 E-value=0.17 Score=43.51 Aligned_cols=51 Identities=6% Similarity=0.090 Sum_probs=35.1
Q ss_pred CchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHH
Q 030988 82 KNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISL 139 (168)
Q Consensus 82 ~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~ 139 (168)
...||.+.+|+-+-..|.+++..- +.+....-.....|+|||||+|.++..
T Consensus 376 s~tYe~fekD~vRy~~Y~~AI~~a-------l~d~~~~~~~~~VVldVGaGtGpLs~~ 426 (745)
T 3ua3_A 376 SGVYNTFEQDQIKYDVYGEAVVGA-------LKDLGADGRKTVVIYLLGGGRGPIGTK 426 (745)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHH-------HHHHHTTCCSEEEEEEESCTTCHHHHH
T ss_pred hHHHHHHcCChhhHHHHHHHHHHH-------HHHhhcccCCCcEEEEECCCCCHHHHH
Confidence 467888899998888888876442 222222112346899999999998643
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=93.37 E-value=0.095 Score=44.51 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=41.4
Q ss_pred CchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHcCC---CCCCCeEEEecCCccHHHHHHHHHCCC----CeEEEccc
Q 030988 82 KNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIYKG---FEEINQLVDVAGGLGANISLLVSKYPQ----IRGINFDL 154 (168)
Q Consensus 82 ~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~---~~~~~~vvDvGGg~G~~~~~l~~~~P~----l~~~v~Dl 154 (168)
...||.+++||-.-..|++|+.. .+.+..+. -.....|+|||+|+|.++...+++--. +++..++-
T Consensus 321 s~tYevFEkD~vKy~~Ye~AI~~-------Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEk 393 (637)
T 4gqb_A 321 SQTYEVFEKDPIKYSQYQQAIYK-------CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEK 393 (637)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH-------HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred hhhhhhhcCChhhHHHHHHHHHH-------HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 46789999999877788887633 23333221 223468999999999884444433222 35555554
No 275
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.34 E-value=0.16 Score=39.81 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=43.1
Q ss_pred HHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHhhCC
Q 030988 111 KKILEIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 111 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+++.+. ......+||...|.|..+.+++++. |+.+++.+|. |..++.++
T Consensus 47 ~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 47 DEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp HHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred HHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 46777777 6667899999999999999999985 8899999998 67777664
No 276
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.12 E-value=0.13 Score=39.21 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=34.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch-HHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP-HVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP-~vi~~a 161 (168)
.+++.+. .....|+|++||+|..++++++. +-+++.+|+. ..++.|
T Consensus 227 ~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a 273 (297)
T 2zig_A 227 RLVRMFS--FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLA 273 (297)
T ss_dssp HHHHHHC--CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred HHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHH
Confidence 4555554 23469999999999999999886 5689999984 444443
No 277
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=93.05 E-value=0.096 Score=42.74 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=35.2
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHHh
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ-IRGINFDL-PHVIK 159 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-P~vi~ 159 (168)
++...+ .....+|||+|+|+|..+..+++..++ -+++.+|. |.-++
T Consensus 97 ~~~~L~-~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~ 144 (456)
T 3m4x_A 97 VGTAAA-AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAK 144 (456)
T ss_dssp HHHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHH
T ss_pred HHHHcC-CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 344455 556679999999999999999988765 68899997 44444
No 278
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=92.29 E-value=0.2 Score=38.68 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=34.2
Q ss_pred HHcCCCCCCCeEEEecCCccHHHHHHHHHC-CCCeEEEccc-hHHHh
Q 030988 115 EIYKGFEEINQLVDVAGGLGANISLLVSKY-PQIRGINFDL-PHVIK 159 (168)
Q Consensus 115 ~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~ 159 (168)
...+ .....+|+|+|+|+|..+..+++.. +.-+++.+|. |..++
T Consensus 96 ~~l~-~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~ 141 (309)
T 2b9e_A 96 MLLD-PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLA 141 (309)
T ss_dssp HHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred HHhC-CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHH
Confidence 3445 5566799999999999999999874 5678999997 44444
No 279
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=91.95 E-value=0.2 Score=37.50 Aligned_cols=46 Identities=9% Similarity=-0.004 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 109 VMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
....+.+.+- +.....|||+||++|.++.-++....--++..+|+-
T Consensus 66 KL~ei~ek~~-l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG 111 (267)
T 3p8z_A 66 KLQWFVERNM-VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKG 111 (267)
T ss_dssp HHHHHHHTTS-SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCC
T ss_pred HHHHHHHhcC-CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecC
Confidence 3446666675 777779999999999999977776655578888873
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=91.45 E-value=0.14 Score=43.91 Aligned_cols=39 Identities=8% Similarity=-0.061 Sum_probs=30.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||+|||+|.+++.+++... -+++.+|+ |..++.++
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~ 579 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAE 579 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHH
T ss_pred CCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHH
Confidence 46999999999999999998533 36899998 55665543
No 281
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=90.97 E-value=0.47 Score=38.87 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=31.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEccc-hHHHh
Q 030988 122 EINQLVDVAGGLGANISLLVSKYP-QIRGINFDL-PHVIK 159 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-P~vi~ 159 (168)
...+|+|+|||+|..+..+++..+ .-+++.+|. |.-++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~ 156 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVK 156 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHH
Confidence 567999999999999999999876 478899997 44443
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=90.86 E-value=0.11 Score=41.29 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=29.5
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
+..-.++||+|+++|.++.-++++ +.+++.+|.-
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~ 242 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNG 242 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhh
Confidence 345689999999999999999988 7899999963
No 283
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=90.85 E-value=0.32 Score=37.37 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 108 LVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
+....+.+. .-+....++||+||++|.++.-+++..+-.+++.+|+
T Consensus 68 ~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdl 113 (300)
T 3eld_A 68 AKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTL 113 (300)
T ss_dssp HHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred HHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEe
Confidence 333344455 3256678999999999999999998765545555555
No 284
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=90.83 E-value=0.23 Score=38.32 Aligned_cols=45 Identities=11% Similarity=0.176 Sum_probs=33.8
Q ss_pred HHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 109 VMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 109 ~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
....+.+.+. +.....||||||++|.++.-++....--++..+|+
T Consensus 82 KL~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdv 126 (321)
T 3lkz_A 82 KLRWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTK 126 (321)
T ss_dssp HHHHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECC
T ss_pred HHHHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEc
Confidence 3345666665 66667999999999999997776655556788886
No 285
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=90.78 E-value=0.1 Score=41.24 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=26.2
Q ss_pred CCCCeEEEecCCccHHHHH--------HHH--------HCCCCeEEEccchH
Q 030988 121 EEINQLVDVAGGLGANISL--------LVS--------KYPQIRGINFDLPH 156 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~--------l~~--------~~P~l~~~v~DlP~ 156 (168)
++.-+|+|+||++|..+.. +.+ ..|+++++.-|||.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~ 101 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPG 101 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTT
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCc
Confidence 3457899999999964443 322 26788899999984
No 286
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=90.00 E-value=2.7 Score=29.31 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 94 RRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 94 ~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
+.++|.+.|.+.... ....++...+.+ .-|+|+|=|+|..=-.+.+.+|+-+..|||+
T Consensus 15 RLDsfirRltaQR~~-L~~a~~~v~~~~--GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 15 RLDLFIDRMVSQRAC-LEHAIAQTAGLS--GPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHTTTCC--SCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhcCCC--CceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 356888888664332 334455554233 5799999999999999999999999999997
No 287
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=89.50 E-value=0.82 Score=35.21 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=39.2
Q ss_pred HHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCC-CCeEEEccchHHHhhC
Q 030988 98 FNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYP-QIRGINFDLPHVIKDA 161 (168)
Q Consensus 98 f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~DlP~vi~~a 161 (168)
+.+.+...+.+. ..+++.+- -.+..+||++|+|.=..+..+. +| +++++-+|+|.|++..
T Consensus 80 ~~~~~~~Rt~~~-d~~v~~~~-~~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k 140 (310)
T 2uyo_A 80 MRSYQAVRTNFF-DTYFNNAV-IDGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYK 140 (310)
T ss_dssp HHHHHHHHHHHH-HHHHHHHH-HTTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHH-HhCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHH
Confidence 444554444443 34444332 2456799999999887755554 35 4889999999998753
No 288
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=88.89 E-value=0.3 Score=39.04 Aligned_cols=40 Identities=10% Similarity=0.040 Sum_probs=32.7
Q ss_pred CCeEEEecCCccHHHHHHHHHCCC-CeEEEccc-hHHHhhCC
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQ-IRGINFDL-PHVIKDAP 162 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-P~vi~~a~ 162 (168)
..+|||+++|+|.+++.++++.++ -+++..|. |..++.++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~ 94 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMK 94 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHH
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 468999999999999999998776 46899998 66665543
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=88.80 E-value=0.36 Score=33.36 Aligned_cols=31 Identities=13% Similarity=0.126 Sum_probs=24.3
Q ss_pred CCeEEEecCCccH-HHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGA-NISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~-~~~~l~~~~P~l~~~v~Dl 154 (168)
..++|+||+|+|. .+..|++. -+..++..|+
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDI 67 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDI 67 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCCEEEEECS
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCCeEEEEEC
Confidence 4699999999995 77777652 4677888886
No 290
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=88.06 E-value=0.22 Score=41.37 Aligned_cols=49 Identities=18% Similarity=0.125 Sum_probs=33.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCC------------------CCeEEEccc-hHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYP------------------QIRGINFDL-PHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P------------------~l~~~v~Dl-P~vi~~a 161 (168)
.+++..+ .....+|+|.+||+|.++..+.+... ..+++.+|+ |..++.|
T Consensus 160 ~mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 160 TIIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp HHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred HHHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 3455555 44457999999999999988876532 236788887 5555443
No 291
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=88.05 E-value=1.2 Score=35.41 Aligned_cols=63 Identities=8% Similarity=0.129 Sum_probs=41.0
Q ss_pred hcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHH---C----CCCeEEEccchHH
Q 030988 90 KAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSK---Y----PQIRGINFDLPHV 157 (168)
Q Consensus 90 ~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~---~----P~l~~~v~DlP~v 157 (168)
..|+....|-+..... ... +..... ....-+||++|.|+|.++..+++. . ..++..+++.-+.
T Consensus 53 Tapeis~~FGe~la~~---~~~-~w~~~g-~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~ 122 (387)
T 1zkd_A 53 TSPEISQMFGELLGLW---SAS-VWKAAD-EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPV 122 (387)
T ss_dssp SHHHHCHHHHHHHHHH---HHH-HHHHTT-CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHH
T ss_pred CCCchHHHHHHHHHHH---HHH-HHHHcC-CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHH
Confidence 4588777887776443 222 222233 334468999999999999988875 2 3456788877443
No 292
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=87.89 E-value=0.77 Score=36.13 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=24.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
...||+||.|.|.+...|+++...-++++++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~ 90 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEK 90 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEec
Confidence 47899999999999999998743345555554
No 293
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=87.89 E-value=0.37 Score=42.16 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=33.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHHCCC---CeEEEccc-hHHHhhC
Q 030988 120 FEEINQLVDVAGGLGANISLLVSKYPQ---IRGINFDL-PHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvGGg~G~~~~~l~~~~P~---l~~~v~Dl-P~vi~~a 161 (168)
+....+|+|.|||+|.++++++++.+. .+.+.+|. |..++.|
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 334579999999999999999998873 46788887 5555544
No 294
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=87.63 E-value=0.6 Score=35.69 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=25.7
Q ss_pred CCCCCeEEEecC------CccHHHHHHHHHCC-CCeEEEccch
Q 030988 120 FEEINQLVDVAG------GLGANISLLVSKYP-QIRGINFDLP 155 (168)
Q Consensus 120 ~~~~~~vvDvGG------g~G~~~~~l~~~~P-~l~~~v~DlP 155 (168)
+....+|||||| |+|. ..+++..| +.+++.+|+-
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis 101 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLN 101 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECC
Confidence 566679999999 5577 44566666 6889999973
No 295
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=86.93 E-value=0.86 Score=36.42 Aligned_cols=39 Identities=13% Similarity=0.213 Sum_probs=31.0
Q ss_pred CCCCeEEEecCCccHHHHHHH-HHCCC-CeEEEccc-hHHHh
Q 030988 121 EEINQLVDVAGGLGANISLLV-SKYPQ-IRGINFDL-PHVIK 159 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~-~~~P~-l~~~v~Dl-P~vi~ 159 (168)
+....++|||++.|.++..++ +..|. .+++.|+- |...+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~ 266 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQ 266 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHH
Confidence 455899999999999999988 67776 78988884 54443
No 296
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=84.67 E-value=0.69 Score=38.50 Aligned_cols=48 Identities=23% Similarity=0.107 Sum_probs=32.5
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCC---------------CCeEEEccc-hHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYP---------------QIRGINFDL-PHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P---------------~l~~~v~Dl-P~vi~~a 161 (168)
-+++..+ -.. .+|+|.+||+|.+++++++..+ ..+...+|+ |..+..|
T Consensus 236 lmv~ll~-p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA 299 (544)
T 3khk_A 236 LIVEMLE-PYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLA 299 (544)
T ss_dssp HHHHHHC-CCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHH
T ss_pred HHHHHHh-cCC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHH
Confidence 4455444 222 3999999999999988765433 456788887 5555544
No 297
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=83.16 E-value=1.7 Score=33.93 Aligned_cols=63 Identities=14% Similarity=0.270 Sum_probs=42.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHc-CCCCCCCeEEEecCCccHHHHHHHHH-CCCCeEEEccchHHHhh
Q 030988 97 LFNQSMHNHAALVMKKILEIY-KGFEEINQLVDVAGGLGANISLLVSK-YPQIRGINFDLPHVIKD 160 (168)
Q Consensus 97 ~f~~~m~~~~~~~~~~~~~~~-~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~DlP~vi~~ 160 (168)
..++++...+... +.++..| ....+..+||-+|||.=.....+... .++++..=+|+|+|++.
T Consensus 65 ~inrG~~~Rt~~i-D~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~ 129 (334)
T 3iei_A 65 EINRGYFARVHGV-SQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTR 129 (334)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHH
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHH
Confidence 4456655555543 2333333 20124679999999998888888765 36889999999999873
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=82.71 E-value=2.1 Score=31.69 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=34.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
.+++.+. .....|+|..||+|..+.+..+. +-+++.+|+ |..++.+
T Consensus 204 ~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~ 250 (260)
T 1g60_A 204 RIIRASS--NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQA 250 (260)
T ss_dssp HHHHHHC--CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred HHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHH
Confidence 4555553 34469999999999999999887 678999998 4444443
No 299
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=82.54 E-value=1.1 Score=33.87 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=26.5
Q ss_pred HHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHH
Q 030988 110 MKKILEIYKGFEEINQLVDVAGGLGANISLLVSK 143 (168)
Q Consensus 110 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~ 143 (168)
...+-+.+ -++.-.+|||+||++|.++.-.++.
T Consensus 62 L~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~ 94 (269)
T 2px2_A 62 LRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATM 94 (269)
T ss_dssp HHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTS
T ss_pred HHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhh
Confidence 34565665 3777889999999999999988885
No 300
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=80.78 E-value=1.2 Score=33.21 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=26.1
Q ss_pred CCCeEEEecCCccHHHHHHHHH-------CCC-----CeEEEccc
Q 030988 122 EINQLVDVAGGLGANISLLVSK-------YPQ-----IRGINFDL 154 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~-------~P~-----l~~~v~Dl 154 (168)
...+|++||.|+|..++.+++. +|+ ++++.++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~ 104 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 104 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEEC
Confidence 4479999999999988887665 784 57787775
No 301
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=79.79 E-value=0.76 Score=38.24 Aligned_cols=40 Identities=15% Similarity=-0.002 Sum_probs=30.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHC---CCCeEEEccc-hHHHhhC
Q 030988 122 EINQLVDVAGGLGANISLLVSKY---PQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~---P~l~~~v~Dl-P~vi~~a 161 (168)
...+|+|.+||+|.++.++++.. +..+...+|. |..+..|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA 264 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLA 264 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHH
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHH
Confidence 34699999999999999998885 3567888887 4444443
No 302
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=75.23 E-value=2.7 Score=34.01 Aligned_cols=57 Identities=18% Similarity=0.198 Sum_probs=37.0
Q ss_pred hcHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCC-----CeEEEccc
Q 030988 90 KAARRRNLFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQ-----IRGINFDL 154 (168)
Q Consensus 90 ~~p~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-----l~~~v~Dl 154 (168)
..|+....|-+..... .+..|.. . +..+||++|.|+|.++..+++.... .+..+++.
T Consensus 113 TAPeiS~~FGe~la~~---~~~~~~~-~----g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~ 174 (432)
T 4f3n_A 113 TAPELSPLFAQTLARP---VAQALDA-S----GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDL 174 (432)
T ss_dssp SCGGGHHHHHHHHHHH---HHHHHHH-H----TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECT
T ss_pred CchhhhHHHHHHHHHH---HHHHHHh-c----CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEc
Confidence 5688888888766443 2222222 1 1369999999999999888765432 25666665
No 303
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=62.96 E-value=3.9 Score=27.48 Aligned_cols=50 Identities=26% Similarity=0.330 Sum_probs=34.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCc-cHHHHHHHHHCCCCeE-EEccchHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGL-GANISLLVSKYPQIRG-INFDLPHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~-G~~~~~l~~~~P~l~~-~v~DlP~vi~~a~ 162 (168)
..++.++. .+.-.++|+-||+ =..+..++...+++++ +..++|-+++.+.
T Consensus 54 ~~i~~~~~-~gvliLtDl~GGSp~n~a~~~~~~~~~v~vi~GvNlpmlle~~~ 105 (142)
T 3bed_A 54 AILKEAGN-VPTLVLADLXGGTPCNVAMMAMGTYPQLRVVAGLNLAMAIEAAV 105 (142)
T ss_dssp HHHHHHCS-CCEEEEESSTTSHHHHHHHHHTTTCTTEEEEESCCHHHHHHHHH
T ss_pred HHHHhcCC-CCEEEEEECCCCHHHHHHHHHhccCCCEEEEeCCCHHHHHHHHH
Confidence 45556674 6778999995555 4566666666666664 6679999988653
No 304
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=60.30 E-value=4.5 Score=26.98 Aligned_cols=43 Identities=9% Similarity=0.016 Sum_probs=26.3
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchHHH
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPHVI 158 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~vi 158 (168)
.++.++ -.+.-.++|+||++=....++....| ++.++|+|-|+
T Consensus 52 ai~~~~-~dgVlvltDLGgsp~N~~~al~~~~~--~v~viNlPmve 94 (131)
T 3ct6_A 52 AIEENE-ADNLLTFFDLGSARMNLDLVSEMTDK--ELTIFNVPLIE 94 (131)
T ss_dssp HHHHSS-CSEEEEEESSGGGHHHHHHHHHTCSS--EEEECCSCHHH
T ss_pred HHHhCC-CCCEEEEEeCCCChHHHHHHHHhcCC--CEEEEEhhHHH
Confidence 344455 35677899997666333344443333 66666999884
No 305
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=59.69 E-value=7.8 Score=29.29 Aligned_cols=30 Identities=10% Similarity=0.194 Sum_probs=24.5
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISL--LVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 154 (168)
-|+=||||++-++.+ ++++.++++++|+|.
T Consensus 67 DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 366699999987777 566789999999985
No 306
>4dyq_A Gene 1 protein; GP1, octamer, DNA-binding, viral protein; 1.50A {Shigella phage SF6} PDB: 4dyc_A 4dyr_A 3hef_A 4dzj_A 4dzp_A
Probab=59.23 E-value=12 Score=24.89 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=27.2
Q ss_pred CchhHHhHhcHHHHHHHHHHHHHhhHHHHHHHHHHc
Q 030988 82 KNPFEYAMKAARRRNLFNQSMHNHAALVMKKILEIY 117 (168)
Q Consensus 82 ~~~~e~~~~~p~~~~~f~~~m~~~~~~~~~~~~~~~ 117 (168)
.++|.|+.++|++.+.+.++........+..+.+..
T Consensus 44 ~T~~~W~~~~~ef~e~~~~Ar~~~~~~~~~~~~~ia 79 (140)
T 4dyq_A 44 STVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIA 79 (140)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999987776555555554443
No 307
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=56.11 E-value=6.1 Score=26.22 Aligned_cols=49 Identities=18% Similarity=0.170 Sum_probs=32.2
Q ss_pred HHHHcCCCCCCCeEEEecCCc-cHHHHHHHHHCCCCeE-EEccchHHHhhC
Q 030988 113 ILEIYKGFEEINQLVDVAGGL-GANISLLVSKYPQIRG-INFDLPHVIKDA 161 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~-G~~~~~l~~~~P~l~~-~v~DlP~vi~~a 161 (168)
.++.++.-.+.-.++|+=||+ =..+..++..++++++ +..++|-+++.+
T Consensus 51 ~i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~~~~v~vi~GvNlpmlle~~ 101 (135)
T 1pdo_A 51 QLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL 101 (135)
T ss_dssp HHTTSCCTTCEEEEESSTTSHHHHHHHHHHTTCTTEEEEESCCHHHHHHHH
T ss_pred HHHhcCCCCCEEEEEECCCCCHHHHHHHHHhccCCEEEEeCCCHHHHHHHH
Confidence 444455224668899995555 5566677766666664 667999887743
No 308
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=55.49 E-value=9.7 Score=29.75 Aligned_cols=32 Identities=13% Similarity=-0.030 Sum_probs=24.9
Q ss_pred CeEEEecCCccH--HHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGA--NISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~--~~~~l~~~~P~l~~~v~DlP 155 (168)
..||=||||..- .+..+++++|+++++|+|..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 357779999864 45557788899999999964
No 309
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=54.61 E-value=31 Score=29.25 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=33.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC--------CCeEEEccchHHHhh
Q 030988 122 EINQLVDVAGGLGANISLLVSKYP--------QIRGINFDLPHVIKD 160 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P--------~l~~~v~DlP~vi~~ 160 (168)
+..+||-+|||.=.....+...+| +++..=+|+|+|++.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~ 153 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKI 153 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHH
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHH
Confidence 468999999999999999988866 778899999999863
No 310
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=53.11 E-value=7.4 Score=29.82 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=27.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCC----CeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQ----IRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~----l~~~v~Dl 154 (168)
...||=||+|.|....-|.+.+|+ ++.+++|=
T Consensus 61 ~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 61 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp TCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 469999999999999888888887 58899993
No 311
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=52.32 E-value=13 Score=30.59 Aligned_cols=24 Identities=13% Similarity=0.144 Sum_probs=16.4
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGAN 136 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~ 136 (168)
.+...++ ......|+|||||+=.+
T Consensus 128 gv~~~~~-~~~~~lviDIGGGStEl 151 (513)
T 1u6z_A 128 GVEHTQP-EKGRKLVIDIGGGSTEL 151 (513)
T ss_dssp HHHHHSC-CCSCEEEEEECSSCEEE
T ss_pred HHHhhcc-CCCCEEEEEECCCcEEE
Confidence 4455565 44457999999997543
No 312
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=51.77 E-value=14 Score=28.15 Aligned_cols=22 Identities=23% Similarity=0.380 Sum_probs=15.3
Q ss_pred HHHHHcCCCC-CCCeEEEecCCcc
Q 030988 112 KILEIYKGFE-EINQLVDVAGGLG 134 (168)
Q Consensus 112 ~~~~~~~~~~-~~~~vvDvGGg~G 134 (168)
.+...++ ++ ....++|||||+=
T Consensus 121 gv~~~~~-~~~~~~lviDIGGGSt 143 (315)
T 3mdq_A 121 GVQQAVP-MEDHISLAMDIGGGSV 143 (315)
T ss_dssp HHHHHSC-CTTCCEEEEEECSSCE
T ss_pred HHHhcCC-CCCCCEEEEEeCCCce
Confidence 4455566 53 4568999999974
No 313
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=49.05 E-value=15 Score=29.62 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=27.1
Q ss_pred CCCeEEEecCCccHHHHH--HHHHCCCCeEEEccc
Q 030988 122 EINQLVDVAGGLGANISL--LVSKYPQIRGINFDL 154 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 154 (168)
....||=||||.+.++.+ +.++.++.+++++|.
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~ 44 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSE 44 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 335688899999987777 778889999999985
No 314
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=48.67 E-value=7.4 Score=26.63 Aligned_cols=37 Identities=24% Similarity=0.265 Sum_probs=30.0
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSYQ 165 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~~ 165 (168)
+.||+|.=..-.+.++|++++.+.--|.....++..+
T Consensus 63 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hN 99 (149)
T 3he8_A 63 VICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHN 99 (149)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTT
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhC
Confidence 6678998777888999999998887788777776554
No 315
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=48.66 E-value=8.9 Score=26.61 Aligned_cols=37 Identities=22% Similarity=0.108 Sum_probs=30.1
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSYQ 165 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~~ 165 (168)
+.||+|.=..-.+.++|++++.+.--|.....++..+
T Consensus 67 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hN 103 (162)
T 2vvp_A 67 VLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHN 103 (162)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTT
T ss_pred EEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhC
Confidence 6788998888889999999998877777777776554
No 316
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=47.37 E-value=8.2 Score=26.92 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=30.0
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSYQ 165 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~~ 165 (168)
+.||+|.=..-.+.++|.+++.+.--|.....++..+
T Consensus 84 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~hN 120 (166)
T 3s5p_A 84 LVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHN 120 (166)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTT
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhC
Confidence 6678998778888999999998887787777776554
No 317
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=46.66 E-value=9.1 Score=26.36 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=30.2
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSYQ 165 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~~ 165 (168)
+.||+|.=..-.+.++|.+++.+.--|.....++..+
T Consensus 75 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hN 111 (155)
T 1o1x_A 75 LLCGTGLGMSIAANRYRGIRAALCLFPDMARLARSHN 111 (155)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTT
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHcC
Confidence 6788998888889999999998887787777776554
No 318
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=46.18 E-value=7.7 Score=27.13 Aligned_cols=37 Identities=24% Similarity=0.265 Sum_probs=30.2
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSYQ 165 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~~ 165 (168)
+.||+|.=..-.+.++|.+++.+.--|.....++..+
T Consensus 83 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR~hN 119 (169)
T 3ph3_A 83 VICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHN 119 (169)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTT
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhC
Confidence 6788998888889999999998887788777776554
No 319
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=45.16 E-value=63 Score=26.30 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=26.8
Q ss_pred HHHHHcCCCCCCCeEEEecCCccH-----HHHHHHHHCCCCe
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGA-----NISLLVSKYPQIR 148 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~ 148 (168)
..++.+|.+..+..+-++|||+|. ++..+...||+..
T Consensus 124 ~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~ 165 (475)
T 3cb2_A 124 READGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKL 165 (475)
T ss_dssp HHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSE
T ss_pred HHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCc
Confidence 456667756778899999999973 4445566798754
No 320
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=42.90 E-value=8 Score=28.16 Aligned_cols=36 Identities=14% Similarity=0.036 Sum_probs=29.2
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSY 164 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~ 164 (168)
+.||+|.=..-.+.++|++++.+.--|.....++.+
T Consensus 73 liCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~H 108 (216)
T 2ppw_A 73 TGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQI 108 (216)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHH
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHh
Confidence 778999888888999999999877777777666544
No 321
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=42.79 E-value=23 Score=29.18 Aligned_cols=33 Identities=18% Similarity=0.054 Sum_probs=26.4
Q ss_pred CCeEEEecCCccHHH--HHHHHHCCCCeEEEccch
Q 030988 123 INQLVDVAGGLGANI--SLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~--~~l~~~~P~l~~~v~DlP 155 (168)
..+||=||||.+-++ ..++++.|+.+++++|.-
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~ 70 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERG 70 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 468999999998654 447777889999999863
No 322
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=42.78 E-value=8.9 Score=27.88 Aligned_cols=36 Identities=11% Similarity=-0.091 Sum_probs=29.1
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSY 164 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~ 164 (168)
+.||+|.=..-.+.++|++++.+.--|.....++.+
T Consensus 72 liCGTGiG~siaANKv~GIRAAlc~d~~sA~laR~h 107 (214)
T 3ono_A 72 TGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQI 107 (214)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHH
T ss_pred EEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHH
Confidence 778999888888999999999777777777666544
No 323
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=42.60 E-value=33 Score=28.22 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=22.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSK 143 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~ 143 (168)
-+++..+ -....+|+|-.||+|.++.+..+.
T Consensus 208 lmv~l~~-p~~~~~I~DPacGsGgfL~~a~~~ 238 (530)
T 3ufb_A 208 FMVEVMD-PQLGESVLDPACGTGGFLVEAFEH 238 (530)
T ss_dssp HHHHHHC-CCTTCCEEETTCTTTHHHHHHHHH
T ss_pred HHHHhhc-cCCCCEEEeCCCCcchHHHHHHHH
Confidence 3445554 344469999999999998876653
No 324
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=41.54 E-value=15 Score=24.65 Aligned_cols=49 Identities=18% Similarity=0.190 Sum_probs=33.0
Q ss_pred HHHHc-CCCCCCCeEEEecCCccH-HHHHHHHHCCCCeE-EEccchHHHhhCC
Q 030988 113 ILEIY-KGFEEINQLVDVAGGLGA-NISLLVSKYPQIRG-INFDLPHVIKDAP 162 (168)
Q Consensus 113 ~~~~~-~~~~~~~~vvDvGGg~G~-~~~~l~~~~P~l~~-~v~DlP~vi~~a~ 162 (168)
.++.+ +.-.+.-.++|+-||+-. .+..+ ...+++++ +...+|-+++.+.
T Consensus 53 ~i~~~~~~~~gvliLtDl~GGSp~n~a~~l-~~~~~v~vItGvNLpMlle~~~ 104 (144)
T 3lfh_A 53 IIKEKLQEDKEIIIVVDLFGGSPFNIALSM-MKEYDVKVITGINMPMLVELLT 104 (144)
T ss_dssp HHHHHHTTTCEEEEEESSSSSHHHHHHHHH-HHHHCCEEEESCCHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEEEeCCCCCHHHHHHHH-hcCCCEEEEeCCCHHHHHHHHH
Confidence 34445 423456789999777775 44445 45677875 8999999888553
No 325
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=41.41 E-value=11 Score=26.56 Aligned_cols=37 Identities=19% Similarity=0.190 Sum_probs=29.8
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSYQ 165 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~~ 165 (168)
+.||+|.=..-.+.++|.+++.+.--|.....++..+
T Consensus 87 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HN 123 (179)
T 3k7p_A 87 LAAGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHN 123 (179)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTT
T ss_pred EEccCcHHHhhHhhcCCCeEEEEeCCHHHHHHHHHhC
Confidence 6678998777888999999998887787777776554
No 326
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=41.09 E-value=28 Score=26.89 Aligned_cols=32 Identities=9% Similarity=0.022 Sum_probs=26.6
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
..|+=||||.+-++.++.-+..+++++|+|.-
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 46888999999888877766679999999973
No 327
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=40.55 E-value=10 Score=27.90 Aligned_cols=36 Identities=14% Similarity=-0.078 Sum_probs=28.9
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSY 164 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~ 164 (168)
+.||+|.=..-.+.++|++++.+.--|.....++..
T Consensus 89 liCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~H 124 (231)
T 3c5y_A 89 TGCGTGMGSMLAANAMPGVFCGLVIDPTDAFLFGQI 124 (231)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHH
T ss_pred EEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHh
Confidence 678899888888999999999877777777666544
No 328
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=40.48 E-value=19 Score=27.23 Aligned_cols=31 Identities=13% Similarity=0.117 Sum_probs=24.3
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||.+-++.++.-+..+++++++|.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 45 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIES 45 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 4677799999987777655556889999986
No 329
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=40.21 E-value=20 Score=29.42 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=25.2
Q ss_pred CCeEEEecCCccHHHHH--HHHHC-CCCeEEEccchH
Q 030988 123 INQLVDVAGGLGANISL--LVSKY-PQIRGINFDLPH 156 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~--l~~~~-P~l~~~v~DlP~ 156 (168)
...||=||||..-++.+ |++.+ ++++++|+|.+.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 45788899999865555 44444 899999999753
No 330
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=39.49 E-value=16 Score=24.88 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=28.0
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPS 163 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~ 163 (168)
+.||+|.=..-.+.++|.+++.+.--|.....++.
T Consensus 64 liCGTGiG~siaANKv~GIRAal~~d~~sA~~ar~ 98 (149)
T 2vvr_A 64 LICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQ 98 (149)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHH
T ss_pred EEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHH
Confidence 67889988888899999999977777776666553
No 331
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=39.01 E-value=13 Score=26.38 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=29.6
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSYQ 165 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~~ 165 (168)
+-||+|.=..-.+.++|.+++.+.--|.....++..+
T Consensus 95 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HN 131 (184)
T 3sgw_A 95 MICGTGLGVAISANKVPGIRAVTAHDTFSVERAILSN 131 (184)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTT
T ss_pred EEcCCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhC
Confidence 5678998777788999999998877787777776554
No 332
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=38.76 E-value=17 Score=24.93 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=34.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeE-EEccchHHHhhCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRG-INFDLPHVIKDAP 162 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~-~v~DlP~vi~~a~ 162 (168)
..++.++.-.+.-.++|+-||+-......+...+++++ +.+.+|-+++.+.
T Consensus 69 ~~i~~~~~~~gVLiLtDl~GGSP~n~a~~~~~~~~v~vItGvNLpMlle~~~ 120 (159)
T 3mtq_A 69 ALVARFPAQDELIVITDIFAGSVNNEFVRFLSRPHFHLLSGLNLPLIIDLLI 120 (159)
T ss_dssp HHHHTSCTTSEEEEEESCTTSHHHHHHHGGGGSTTEEEEECCCHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEEEeCCCCCHHHHHHHHhcCCCeEEEeCCCHHHHHHHHH
Confidence 44555552344568899999988655433335677775 8899999888653
No 333
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=38.40 E-value=25 Score=28.53 Aligned_cols=32 Identities=13% Similarity=-0.037 Sum_probs=24.8
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
-++||=||||.|.+..+..-+..+.++|++|.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~ 73 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISP 73 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEES
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECC
Confidence 46899999999987766554556789999983
No 334
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=37.46 E-value=21 Score=28.55 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=23.8
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.||=||||.+-++.+..-+..+++++++|.
T Consensus 13 dVvVIGgG~aGl~aA~~l~~~g~~V~liE~ 42 (479)
T 2hqm_A 13 DYLVIGGGSGGVASARRAASYGAKTLLVEA 42 (479)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEES
T ss_pred CEEEEcCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 577799999987777555556899999995
No 335
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=37.10 E-value=28 Score=28.22 Aligned_cols=44 Identities=18% Similarity=0.323 Sum_probs=30.9
Q ss_pred HHHHHcCCCCCCCeEEEecCCccH-----HHHHHHHHCCCCeE---EEccch
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGA-----NISLLVSKYPQIRG---INFDLP 155 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~~---~v~DlP 155 (168)
..++.+|.+.++..+-.+|||+|. ++..|...||+... .|+--|
T Consensus 124 k~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~~v~P~~ 175 (451)
T 3ryc_A 124 KLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAP 175 (451)
T ss_dssp HHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCT
T ss_pred HHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEEEEEecCC
Confidence 456777767788899999999983 44457778998543 444444
No 336
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=36.69 E-value=34 Score=25.75 Aligned_cols=32 Identities=16% Similarity=-0.024 Sum_probs=25.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHC-----CCCeEEEcc
Q 030988 122 EINQLVDVAGGLGANISLLVSKY-----PQIRGINFD 153 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~-----P~l~~~v~D 153 (168)
....||.+|...|.-++.+++.. |+-+++.+|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~D 142 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVAD 142 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEE
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEE
Confidence 45799999999998777766554 577888888
No 337
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=36.43 E-value=27 Score=28.60 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=13.8
Q ss_pred HHHHHcCCCCCCCeEEEecCCcc
Q 030988 112 KILEIYKGFEEINQLVDVAGGLG 134 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G 134 (168)
.+...++ ... ..|+|||||+=
T Consensus 132 gv~~~~~-~~~-~lvvDIGGGSt 152 (508)
T 3hi0_A 132 GVISGFY-QPD-GIAGDLGGGSL 152 (508)
T ss_dssp HHHHHSS-SCE-EEEEEECSSCE
T ss_pred HHHhcCC-CCC-eEEEEeCCCce
Confidence 3445555 332 48999999973
No 338
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=35.43 E-value=5 Score=25.04 Aligned_cols=28 Identities=21% Similarity=0.320 Sum_probs=23.2
Q ss_pred ccccccCCcccceeecCCCCccccceecchhccccCC
Q 030988 2 LQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLP 38 (168)
Q Consensus 2 Lr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~ 38 (168)
++.|...|+++.. .+.|.+|+.|..++.
T Consensus 41 l~~L~~~GLI~~~---------~~~~~LT~kG~~~l~ 68 (95)
T 1r7j_A 41 IKMLMDLEIIRQE---------GKQYMLTKKGEELLE 68 (95)
T ss_dssp HHHHHHTTSEEEE---------TTEEEECHHHHHHHH
T ss_pred HHHHHHCCCeEEE---------CCeeEEChhHHHHHH
Confidence 5678899999996 567999999998764
No 339
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=35.10 E-value=5.4 Score=18.84 Aligned_cols=9 Identities=56% Similarity=1.047 Sum_probs=7.0
Q ss_pred EEecCCccH
Q 030988 127 VDVAGGLGA 135 (168)
Q Consensus 127 vDvGGg~G~ 135 (168)
|.+|||+|.
T Consensus 10 velgggpga 18 (31)
T 1t0c_A 10 VELGGGPGA 18 (31)
T ss_dssp TSCCCSTTS
T ss_pred EEecCCCCc
Confidence 568998885
No 340
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=34.91 E-value=27 Score=25.60 Aligned_cols=31 Identities=16% Similarity=0.021 Sum_probs=23.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||.+-++.+..-+.-+.+++++|.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 4688899999977666554444788999986
No 341
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=34.86 E-value=31 Score=27.92 Aligned_cols=45 Identities=22% Similarity=0.245 Sum_probs=31.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccH-----HHHHHHHHCCCCe---EEEccchH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGA-----NISLLVSKYPQIR---GINFDLPH 156 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~---~~v~DlP~ 156 (168)
..++.+|.+.++..+-.+|||+|. ++..|...||+.. ..|+=-|.
T Consensus 122 k~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~sV~Psp~ 174 (445)
T 3ryc_B 122 KESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPK 174 (445)
T ss_dssp HHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEEEEEECCGG
T ss_pred HHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccceEEEEeCCc
Confidence 456677756778889999999984 4445778899853 24444454
No 342
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=34.30 E-value=29 Score=26.76 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=23.8
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
..|+=||||..-++.++.-+.-+++++|+|.-
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 46777999998766665444458999999963
No 343
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=34.15 E-value=55 Score=26.63 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=27.5
Q ss_pred HHHHHcCCCCCCCeEEEecCCccH-----HHHHHHHHCCCC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGA-----NISLLVSKYPQI 147 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l 147 (168)
..++.+|.+..+..+-.+|||+|. ++..+...||+.
T Consensus 126 ~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~ 166 (473)
T 2bto_A 126 YEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEI 166 (473)
T ss_dssp HHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCC
Confidence 456777756678899999999983 566677789875
No 344
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=34.03 E-value=31 Score=26.38 Aligned_cols=31 Identities=10% Similarity=-0.008 Sum_probs=23.8
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..|+=||||.+-++.++.-+.-+++++|+|.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 4677799999877666555555899999996
No 345
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=33.74 E-value=23 Score=26.21 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=24.2
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
...||=||||.+-++.+..-+.-+++++++|.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 46788899999876666544444889999987
No 346
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=33.29 E-value=36 Score=26.45 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=22.9
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEccch
Q 030988 125 QLVDVAGGLGANISL--LVSKYPQIRGINFDLP 155 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~--l~~~~P~l~~~v~DlP 155 (168)
.|+=||||..-++.+ ++++.|+++++++|.-
T Consensus 81 DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~ 113 (344)
T 3jsk_A 81 DIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAG 113 (344)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEEESS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 466699998865444 5555689999999863
No 347
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=33.18 E-value=32 Score=26.21 Aligned_cols=15 Identities=27% Similarity=0.211 Sum_probs=11.4
Q ss_pred CCCeEEEecCCccHH
Q 030988 122 EINQLVDVAGGLGAN 136 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~ 136 (168)
....++|||||+=.+
T Consensus 138 ~~~lvvDIGGGStEl 152 (315)
T 1t6c_A 138 GEVCVVDQGGGSTEY 152 (315)
T ss_dssp SEEEEEEEETTEEEE
T ss_pred CCEEEEEeCCCcEEE
Confidence 347999999997543
No 348
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=32.83 E-value=30 Score=25.56 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=23.9
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
..|+=||||.+-++.++.-+...++++++|..
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 46788999998766665444457899999863
No 349
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=32.62 E-value=24 Score=27.45 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=26.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCC----CeEEEcc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQ----IRGINFD 153 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~----l~~~v~D 153 (168)
..||=+|.++|....-|.+.||+ ++.+++|
T Consensus 77 ~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiD 110 (348)
T 1vpt_A 77 ATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLID 110 (348)
T ss_dssp CEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CeEEEeCcCCcchHHHHHHHhhhcCCceEEEEEC
Confidence 49999999999998888887776 7999999
No 350
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=32.29 E-value=35 Score=27.09 Aligned_cols=31 Identities=10% Similarity=0.072 Sum_probs=24.5
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..|+=||+|.+.++.+..-+..+.+++++|.
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~ 42 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDK 42 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4577799999987777665556899999985
No 351
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=32.16 E-value=44 Score=26.72 Aligned_cols=45 Identities=24% Similarity=0.321 Sum_probs=29.8
Q ss_pred HHHHHcCCCCCCCeEEEecCCccH-----HHHHHHHHCCCCe---EEEccchH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGA-----NISLLVSKYPQIR---GINFDLPH 156 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~---~~v~DlP~ 156 (168)
..++..|.+..+..+-++|||+|. ++..+...||+.. ..|+--|.
T Consensus 123 ~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~p~p~ 175 (426)
T 2btq_B 123 SAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVVPSPL 175 (426)
T ss_dssp HHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEECCGG
T ss_pred HHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEEEEecCCc
Confidence 445556645668899999999983 5555667788753 34544453
No 352
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=31.97 E-value=82 Score=25.35 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=22.8
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHH-HHHHCCCCe
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISL-LVSKYPQIR 148 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~-l~~~~P~l~ 148 (168)
.+-..+. .+. ..+|=+||+.|-.+.+ +...||++=
T Consensus 118 ~~k~~~~-~~~-~pwI~~GGSY~G~LaAW~R~kYP~lv 153 (472)
T 4ebb_A 118 ALRRDLG-AQD-APAIAFGGSYGGMLSAYLRMKYPHLV 153 (472)
T ss_dssp HHHHHTT-CTT-CCEEEEEETHHHHHHHHHHHHCTTTC
T ss_pred HHHhhcC-CCC-CCEEEEccCccchhhHHHHhhCCCeE
Confidence 3334454 333 3566699999865555 778999973
No 353
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=31.28 E-value=48 Score=26.46 Aligned_cols=31 Identities=10% Similarity=0.117 Sum_probs=23.9
Q ss_pred CeEEEecCCccHHHHH--HHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISL--LVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 154 (168)
..||=||||.+-++.+ +++..++.+++++|.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~ 69 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEK 69 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC
Confidence 4688899999865444 556568999999985
No 354
>2kvo_A Photosystem II reaction center PSB28 protein; membrane, photosynthesis, thylakoid, structural genom 2, protein structure initiative; NMR {Synechocystis SP}
Probab=31.17 E-value=15 Score=24.04 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=15.9
Q ss_pred hHhcHHHHHHHHHHHHHhhH
Q 030988 88 AMKAARRRNLFNQSMHNHAA 107 (168)
Q Consensus 88 ~~~~p~~~~~f~~~m~~~~~ 107 (168)
..++++.+++|+|.|..++.
T Consensus 83 ~m~s~~~WdRFMRFMeRYA~ 102 (120)
T 2kvo_A 83 ILNSQPEWDRFMRFMERYGA 102 (120)
T ss_dssp EECSSHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHHHH
Confidence 34667789999999988864
No 355
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.16 E-value=42 Score=25.58 Aligned_cols=15 Identities=27% Similarity=0.237 Sum_probs=11.8
Q ss_pred CCCCeEEEecCCccH
Q 030988 121 EEINQLVDVAGGLGA 135 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~ 135 (168)
+.-..++|||||...
T Consensus 48 ~~GAdiIDIg~g~~~ 62 (300)
T 3k13_A 48 EDGALVIDVNMDDGL 62 (300)
T ss_dssp HTTCSEEEEECCCTT
T ss_pred HCCCCEEEECCCCCC
Confidence 445789999998774
No 356
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=31.13 E-value=25 Score=23.98 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=28.2
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEccchHHHhhCCCC
Q 030988 129 VAGGLGANISLLVSKYPQIRGINFDLPHVIKDAPSY 164 (168)
Q Consensus 129 vGGg~G~~~~~l~~~~P~l~~~v~DlP~vi~~a~~~ 164 (168)
+.||+|.=..-.+.++|.+++.+.--|.....++..
T Consensus 69 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~h 104 (148)
T 4em8_A 69 LICGTGIGMSIAANRHKNIRAALCSSTMLAKLSREH 104 (148)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHH
T ss_pred EEccCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHh
Confidence 667899878888999999999777767776666543
No 357
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=30.89 E-value=28 Score=27.37 Aligned_cols=31 Identities=10% Similarity=-0.023 Sum_probs=24.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..|+=||||..-++.++.-+--+++++|+|.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 4688899999987777665556899999985
No 358
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=30.82 E-value=30 Score=26.75 Aligned_cols=16 Identities=25% Similarity=0.349 Sum_probs=12.2
Q ss_pred CCCeEEEecCCccHHH
Q 030988 122 EINQLVDVAGGLGANI 137 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~ 137 (168)
....++|||||+=.++
T Consensus 146 ~~~lviDIGGGStel~ 161 (343)
T 3cer_A 146 APYLVVDLGGGSTELV 161 (343)
T ss_dssp SSEEEEEECSSCEEEE
T ss_pred CCEEEEEeCCCceEEE
Confidence 3469999999986554
No 359
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=30.81 E-value=1.1e+02 Score=23.06 Aligned_cols=41 Identities=17% Similarity=0.262 Sum_probs=32.2
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPH 156 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~ 156 (168)
.+++.+. .....|+|-=||+|..+.+..+. +-+++.+|+++
T Consensus 244 ~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~ 284 (323)
T 1boo_A 244 FFIRMLT--EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKP 284 (323)
T ss_dssp HHHHHHC--CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCH
T ss_pred HHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCH
Confidence 4455443 33469999999999999998887 68899999965
No 360
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=30.71 E-value=30 Score=27.65 Aligned_cols=30 Identities=13% Similarity=0.007 Sum_probs=24.0
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.|+=||||.+-++.++.-+--+++++++|.
T Consensus 28 DVvVIGgG~aGl~aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 28 DLFVIGSGSGGVRAARLAGALGKRVAIAEE 57 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHhCcCEEEEEeC
Confidence 577799999987777655555899999996
No 361
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=30.68 E-value=30 Score=27.67 Aligned_cols=30 Identities=10% Similarity=0.196 Sum_probs=23.2
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.|+=||||.+-++.+..-+--+.+++++|.
T Consensus 27 dVvVIGgG~aGl~aA~~la~~G~~V~liEk 56 (491)
T 3urh_A 27 DLIVIGSGPGGYVCAIKAAQLGMKVAVVEK 56 (491)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 477799999987776555545889999995
No 362
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=30.47 E-value=53 Score=27.57 Aligned_cols=31 Identities=16% Similarity=0.053 Sum_probs=25.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||.+.+..+..-+-.+.+++++|.
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~ 404 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQVTLFDA 404 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5789999999988777666666889999985
No 363
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=30.39 E-value=33 Score=26.03 Aligned_cols=32 Identities=13% Similarity=0.066 Sum_probs=23.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
..||=||||..-++.++.-+-.+++++|+|..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 46777999988766665444468999999974
No 364
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=30.06 E-value=46 Score=24.46 Aligned_cols=31 Identities=13% Similarity=0.120 Sum_probs=22.9
Q ss_pred eEEEecCCccHHHHHHHHHC-CCCeEEEccch
Q 030988 125 QLVDVAGGLGANISLLVSKY-PQIRGINFDLP 155 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~-P~l~~~v~DlP 155 (168)
.||=||||..-+..++.-+. |+++++++|.-
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~ 72 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS 72 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTSCEEEEESS
T ss_pred CEEEECccHHHHHHHHHHHHcCCCeEEEEECC
Confidence 46779999876666654444 79999999864
No 365
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=29.23 E-value=44 Score=27.53 Aligned_cols=28 Identities=29% Similarity=0.294 Sum_probs=24.4
Q ss_pred EEEecCCccHHHHHHHHHCCCCeEEEcc
Q 030988 126 LVDVAGGLGANISLLVSKYPQIRGINFD 153 (168)
Q Consensus 126 vvDvGGg~G~~~~~l~~~~P~l~~~v~D 153 (168)
|+=||+|+|-+..++..+--+++++++|
T Consensus 45 viVIG~GpaG~~aA~~aa~~G~kValIE 72 (542)
T 4b1b_A 45 YVVIGGGPGGMASAKEAAAHGARVLLFD 72 (542)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 5669999999998888877799999988
No 366
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=28.53 E-value=42 Score=28.08 Aligned_cols=31 Identities=16% Similarity=0.054 Sum_probs=26.2
Q ss_pred CeEEEecCCccHHHHHHHHHC-CCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKY-PQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl 154 (168)
..||=||||..-++.++.-+. .+++++|+|.
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr 64 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQ 64 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeC
Confidence 357779999998888877777 8999999996
No 367
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=28.38 E-value=36 Score=27.63 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=24.0
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..|+=||||.+-+..++.-+--+++++++|.
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~V~liEk 63 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDF 63 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEec
Confidence 3577799999987776555545899999985
No 368
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=27.34 E-value=46 Score=26.85 Aligned_cols=34 Identities=6% Similarity=0.024 Sum_probs=26.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.....||=||||..-++.++.-+..+++++|+|.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 42 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLER 42 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 3345677799999987777665556899999995
No 369
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=27.24 E-value=11 Score=24.97 Aligned_cols=43 Identities=12% Similarity=0.053 Sum_probs=24.0
Q ss_pred HHHHcCCCCCCCeEEEecCCccHHHHH--HHHH--CCCCeEEEccchHH
Q 030988 113 ILEIYKGFEEINQLVDVAGGLGANISL--LVSK--YPQIRGINFDLPHV 157 (168)
Q Consensus 113 ~~~~~~~~~~~~~vvDvGGg~G~~~~~--l~~~--~P~l~~~v~DlP~v 157 (168)
.++.++.-.+.-.++|+||++=....+ ++.. .++ +.++++|-+
T Consensus 57 ai~~~~~~dgVlvltDLGgsp~N~~~~~~~~~~~~~~~--v~vvNlPmv 103 (135)
T 3b48_A 57 TINEADSDREFLIFADLGSAVLSSELAFDMLEEDQQKH--YHLVDAPLV 103 (135)
T ss_dssp HHHHSCSSCEEEEEECSHHHHHHHHHHHHHSCHHHHTT--EEECCSCHH
T ss_pred HHHhcCCCCCEEEEEeCCCChhHHHHHHHHhcccccCC--EEEEEHHHH
Confidence 444455234567899996666332222 3322 344 444599988
No 370
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=26.78 E-value=22 Score=27.34 Aligned_cols=11 Identities=18% Similarity=0.287 Sum_probs=9.2
Q ss_pred CeEEEecCCcc
Q 030988 124 NQLVDVAGGLG 134 (168)
Q Consensus 124 ~~vvDvGGg~G 134 (168)
..|+|||||+=
T Consensus 192 vlVvDIGgGTt 202 (346)
T 2fsj_A 192 GVVIDVGSRTT 202 (346)
T ss_dssp EEEEEECSSCE
T ss_pred EEEEECCCCcE
Confidence 38999999973
No 371
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=26.60 E-value=47 Score=24.65 Aligned_cols=12 Identities=17% Similarity=0.141 Sum_probs=8.5
Q ss_pred CCeEEEecCCcc
Q 030988 123 INQLVDVAGGLG 134 (168)
Q Consensus 123 ~~~vvDvGGg~G 134 (168)
-..++|||||..
T Consensus 38 GAdiIDIg~g~~ 49 (262)
T 1f6y_A 38 GARALDLNVGPA 49 (262)
T ss_dssp TCSEEEEBCC--
T ss_pred CCcEEEECCCCC
Confidence 368999999754
No 372
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=26.59 E-value=43 Score=27.02 Aligned_cols=33 Identities=6% Similarity=-0.010 Sum_probs=25.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
....|+=||||..-++.++.-+..+++++|+|.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 43 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQ 43 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 335677899999987777666666899999996
No 373
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=26.56 E-value=56 Score=25.07 Aligned_cols=30 Identities=10% Similarity=0.194 Sum_probs=22.7
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISL--LVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 154 (168)
.|+=||||..-++.+ ++++.|.++++++|.
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~ 98 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEec
Confidence 466699998865444 566678999999986
No 374
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=26.49 E-value=64 Score=25.61 Aligned_cols=33 Identities=9% Similarity=0.119 Sum_probs=25.7
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
...|+=||||.+-++.+..-+..+.+++|+|.-
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~ 45 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE 45 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeC
Confidence 357888999999887776655568899999863
No 375
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=26.42 E-value=53 Score=25.85 Aligned_cols=35 Identities=9% Similarity=0.033 Sum_probs=25.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
.....|+=||||.+-++.+..-+.-+.+++|+|.-
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~ 48 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESS 48 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 33456778999999877776655568899999863
No 376
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=26.23 E-value=28 Score=27.22 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=26.4
Q ss_pred CCeEEEecCCccH----HHHHHHHHCCCCeEEEccchHHH
Q 030988 123 INQLVDVAGGLGA----NISLLVSKYPQIRGINFDLPHVI 158 (168)
Q Consensus 123 ~~~vvDvGGg~G~----~~~~l~~~~P~l~~~v~DlP~vi 158 (168)
+-.+--+|||+|. +...+++.++-+.+.|+=.|.+-
T Consensus 109 ~~i~as~GGGTGSG~ap~la~~~ke~g~lt~~Vvt~Pf~~ 148 (353)
T 1w5f_A 109 VFITAGFGGGTGTGASPVIAKIAKEMGILTVAIVTTPFYF 148 (353)
T ss_dssp EEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGG
T ss_pred EEEEeccCCCccccHHHHHHHHHHHhCCcEEEEEeCCccc
Confidence 4566778999985 56778888987777777666543
No 377
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=25.98 E-value=11 Score=24.23 Aligned_cols=30 Identities=27% Similarity=0.256 Sum_probs=23.7
Q ss_pred ccccccCCcccceeecCCCCccccceecchhccccCCC
Q 030988 2 LQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLPN 39 (168)
Q Consensus 2 Lr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~~ 39 (168)
|+.|...|+++.. + .+.|++|+.++.++..
T Consensus 50 L~~Le~~GLV~~~---~-----rg~Y~LT~~G~~~l~~ 79 (111)
T 3b73_A 50 LKKLADHDLLQPL---A-----NGVYVITEEGEAYLNG 79 (111)
T ss_dssp HHHHHHTTSEEEC---S-----TTCEEECHHHHHHHTT
T ss_pred HHHHHHCCCEEec---C-----CceEEECchHHHHHHH
Confidence 5678899999985 2 4589999999887654
No 378
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=25.50 E-value=1.1e+02 Score=24.08 Aligned_cols=44 Identities=25% Similarity=0.394 Sum_probs=29.1
Q ss_pred HHHHHcCCCCCCCeEEEecCCccH-----HHHHHHHHCCCCeEEEcc-ch
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGA-----NISLLVSKYPQIRGINFD-LP 155 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~~~v~D-lP 155 (168)
..++.++....+-.+.-+|||+|. ++..+...||.....++= +|
T Consensus 81 ~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~~vtV~P 130 (360)
T 3v3t_A 81 QIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLP 130 (360)
T ss_dssp HHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEEC
T ss_pred HHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEEEEEEeC
Confidence 455555546666778899999985 455567789985543333 44
No 379
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=25.35 E-value=29 Score=26.85 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=25.5
Q ss_pred CeEEEecCCccH----HHHHHHHHCCCCeEEEccchHH
Q 030988 124 NQLVDVAGGLGA----NISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 124 ~~vvDvGGg~G~----~~~~l~~~~P~l~~~v~DlP~v 157 (168)
-.+--+|||+|. +...+++.+|-+.+.|+=.|.+
T Consensus 96 ~i~~s~GGGTGSG~~~~ia~l~~e~g~lt~~Vv~~P~~ 133 (338)
T 2r75_1 96 FISAGLGGGTGTGAAPVIAKTAKEMGILTVAVATLPFR 133 (338)
T ss_dssp EEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCG
T ss_pred EEecccCCCcCCCchHHHHHHHHhcCCCEEEEeCCCcc
Confidence 567789999985 5667889999777766666644
No 380
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=25.31 E-value=43 Score=26.61 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=23.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
..|+=||||.+-+..++.-+--+++++++|..
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 45777999999876665444448999999853
No 381
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=25.09 E-value=53 Score=26.49 Aligned_cols=32 Identities=9% Similarity=-0.062 Sum_probs=24.5
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
...|+=||||..-+..++.-+..+++++|+|.
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk 123 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEK 123 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEe
Confidence 46788899999876666555445899999985
No 382
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=25.02 E-value=81 Score=22.38 Aligned_cols=38 Identities=11% Similarity=0.198 Sum_probs=23.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 121 EEINQLVDVAGGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 121 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
.+.++|++||+| ++..++.+.|+-+++-+|. |+-.+.+
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~~~~g~VvtvE~d~~~~~~a 67 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAELPGKHVTSVESDRAWARMM 67 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHTSTTCEEEEEESCHHHHHHH
T ss_pred hCCCEEEEECch---HHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 345799999975 3444444456778877775 4444443
No 383
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=24.95 E-value=30 Score=27.52 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=26.1
Q ss_pred CCeEEEecCCccH----HHHHHHHHCCCCeEEEccchHH
Q 030988 123 INQLVDVAGGLGA----NISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 123 ~~~vvDvGGg~G~----~~~~l~~~~P~l~~~v~DlP~v 157 (168)
+-.+--+|||+|. +...+++.++-+.+.|+=.|..
T Consensus 105 ffItagmGGGTGSGaapvIaeiake~g~LtvsVVt~Pf~ 143 (396)
T 4dxd_A 105 VFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFS 143 (396)
T ss_dssp EEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCG
T ss_pred EEEEeccCCCccccHHHHHHHHHHhcCCceEEEEeCCcc
Confidence 5567789999985 5567888999887777666643
No 384
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=24.67 E-value=48 Score=27.21 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=24.1
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||.+.++.+..-+.++++++|+|.
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~ 52 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEA 52 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeC
Confidence 4678899999877666544447889999996
No 385
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=24.58 E-value=69 Score=26.86 Aligned_cols=31 Identities=10% Similarity=0.070 Sum_probs=25.3
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||..-++.++.-+--+.+++|+|.
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk 303 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCA 303 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4688899999887777666666899999997
No 386
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=24.14 E-value=49 Score=26.11 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=22.2
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.|+=||||..-++.++.-+--+.+++|+|.
T Consensus 29 dViIIGgG~AGl~aA~~La~~G~~V~llEk 58 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKRGRRVLVIDH 58 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 466699999876666544444889999996
No 387
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=24.09 E-value=32 Score=26.43 Aligned_cols=41 Identities=15% Similarity=0.187 Sum_probs=30.0
Q ss_pred CCCeEEEec--CCccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 122 EINQLVDVA--GGLGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 122 ~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.-.+|+=+| |+.|.+++.+++..-..++++.|. ++-.+.++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~ 214 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK 214 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH
Confidence 335677676 677899999999877789988887 55555443
No 388
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=23.99 E-value=34 Score=27.08 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=26.0
Q ss_pred CCeEEEecCCccH----HHHHHHHHCCCCeEEEccchHH
Q 030988 123 INQLVDVAGGLGA----NISLLVSKYPQIRGINFDLPHV 157 (168)
Q Consensus 123 ~~~vvDvGGg~G~----~~~~l~~~~P~l~~~v~DlP~v 157 (168)
+-.+--+|||+|. +...+++.|+-+.+.|+=.|.+
T Consensus 99 ffI~asmGGGTGSG~apvla~~ake~g~ltvsVvt~Pf~ 137 (382)
T 2vxy_A 99 VFVTAGMGGGTGTGAAPVIAQIAKDLGALTVGVVTRPFT 137 (382)
T ss_dssp EEEEEESSSSHHHHHHHHHHHHHHHTTCEEEEEEEECCG
T ss_pred EEEEeccCCCCCCcHHHHHHHHHHHhCCCeEEEEeCCcc
Confidence 5566789999985 5677888898777766666654
No 389
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=23.92 E-value=25 Score=27.37 Aligned_cols=15 Identities=13% Similarity=0.135 Sum_probs=11.7
Q ss_pred CeEEEecCCccHHHH
Q 030988 124 NQLVDVAGGLGANIS 138 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~ 138 (168)
..++|||||+=.++.
T Consensus 142 ~~v~DiGGGStei~~ 156 (353)
T 3aap_A 142 VGVMDMGGASVQIVF 156 (353)
T ss_dssp EEEEEECSSEEEEEE
T ss_pred EEEEEeCCCceEEEE
Confidence 689999999865543
No 390
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=23.79 E-value=47 Score=28.22 Aligned_cols=31 Identities=6% Similarity=0.102 Sum_probs=25.4
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||.+-+..++.-+..+++++++|.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk 59 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTH 59 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEee
Confidence 3577799999988777776667899999986
No 391
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=23.49 E-value=51 Score=26.92 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=24.5
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||..-++.++.-+..+++++|+|.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr 57 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQ 57 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 3577799999877777665556899999996
No 392
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=23.41 E-value=62 Score=27.27 Aligned_cols=31 Identities=10% Similarity=0.144 Sum_probs=25.1
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
..||=||||..-++.++.-+--+.+++|+|.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk 295 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCA 295 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeC
Confidence 4688899999987777666666899999997
No 393
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=23.37 E-value=47 Score=26.59 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=23.9
Q ss_pred CeEEEecCCccHHHHH--HHHHC-CCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISL--LVSKY-PQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~--l~~~~-P~l~~~v~DlP 155 (168)
..||=||||.+.++.+ +++.. |+.+++++|..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~ 70 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQN 70 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECC
Confidence 4688899999875544 55554 77999999863
No 394
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=23.35 E-value=1.4e+02 Score=20.08 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=25.0
Q ss_pred CCCCCeEEEec--CCccHHHHHHHHHCCCCeEEEccch
Q 030988 120 FEEINQLVDVA--GGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 120 ~~~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
.....+++.+| ||.|..+..+++.. +.++++.|..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~ 72 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGS 72 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESS
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCC
Confidence 55668899998 46677777777654 4688887763
No 395
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=23.33 E-value=29 Score=22.91 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=23.8
Q ss_pred ccccccCCcccceeecCCCCccccceecchhccccCC
Q 030988 2 LQLLASCSFLTCNLVTNKDGNVFRVYGLASVGRYLLP 38 (168)
Q Consensus 2 Lr~L~~~gll~~~~~~~~~~~~~~~y~lt~~s~~l~~ 38 (168)
|+.|...||+++..... +. -.-.|++|+.|+.|..
T Consensus 61 L~~Le~~GLV~R~~~~~-d~-r~v~y~LT~~G~~l~~ 95 (131)
T 4a5n_A 61 LRELEADGIVHREVYHQ-VP-PKVEYSLTEFGRTLEP 95 (131)
T ss_dssp HHHHHHTTSEEEEEECS-SS-CEEEEEECTTGGGGHH
T ss_pred HHHHHHCCCEEEEecCC-CC-CeEEEEECHhHHHHHH
Confidence 67788999999864211 00 0235999999988764
No 396
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=23.32 E-value=1.4e+02 Score=22.74 Aligned_cols=41 Identities=20% Similarity=0.058 Sum_probs=30.9
Q ss_pred CCCCCeEEEec--CCccHHHHHHHHHCCCCeEEEccc-hHHHhhC
Q 030988 120 FEEINQLVDVA--GGLGANISLLVSKYPQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a 161 (168)
.+...+|+-+| ||.|..++.+++.. +.++++.|. ++-.+.+
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~ 204 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFL 204 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHH
Confidence 56667888898 78899999999987 568888886 4444433
No 397
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=23.12 E-value=61 Score=26.95 Aligned_cols=32 Identities=9% Similarity=0.113 Sum_probs=24.2
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
..||=||||..-++.++.-+.-+++++|+|..
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHcCCCCEEEEcCC
Confidence 46888999998766665444448999999975
No 398
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=22.96 E-value=1.5e+02 Score=22.88 Aligned_cols=47 Identities=13% Similarity=-0.065 Sum_probs=33.3
Q ss_pred HHcCCCCCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEccc-hHHHhhCCC
Q 030988 115 EIYKGFEEINQLVDVAGGL-GANISLLVSKYPQI-RGINFDL-PHVIKDAPS 163 (168)
Q Consensus 115 ~~~~~~~~~~~vvDvGGg~-G~~~~~l~~~~P~l-~~~v~Dl-P~vi~~a~~ 163 (168)
+... ++.-.+|+-+|+|. |.+++.+++.. .. ++++.|. ++-.+.++.
T Consensus 179 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 179 VSAG-VKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHTT-CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHT
T ss_pred HHcC-CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHH
Confidence 3444 66667888898765 88999999876 45 8888884 555555543
No 399
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=22.92 E-value=66 Score=26.43 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=25.0
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
-||=||||..-.++++.-+--+++++++|.-
T Consensus 20 DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~ 50 (561)
T 3da1_A 20 DLLVIGGGITGAGIALDAQVRGIQTGLVEMN 50 (561)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4666999998887777666679999999874
No 400
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=22.61 E-value=56 Score=26.90 Aligned_cols=32 Identities=16% Similarity=0.102 Sum_probs=24.3
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
...|+=||||++-++.+..-+--+++++++|.
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 35688899999987777554444789999984
No 401
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=22.52 E-value=63 Score=21.10 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=34.3
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHH-CCCCeE-EEccchHHHhhC
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSK-YPQIRG-INFDLPHVIKDA 161 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~-~v~DlP~vi~~a 161 (168)
..++.++.-++.-.++|+ |..=.++..+.+. .+++++ ....+|-+++.+
T Consensus 53 ~~i~~~d~~~GVLiL~Dm-GSp~n~a~~l~~~~~~~v~vI~gvnlpmllea~ 103 (130)
T 3gx1_A 53 QTVVKLNPVKGVLILSDM-GSLTSFGNILTEELGIRTKTVTMVSTPVVLEAM 103 (130)
T ss_dssp HHHHTSCCTTCEEEEECS-GGGGTHHHHHHHHHCCCEEEECSCCHHHHHHHH
T ss_pred HHHHhhCCCCCEEEEEeC-CCHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHH
Confidence 445556634567899999 5555667777766 567775 788899888764
No 402
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=22.43 E-value=52 Score=26.32 Aligned_cols=32 Identities=6% Similarity=-0.148 Sum_probs=22.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
...|+=||||.+.++.+..-+.-+.+++++|.
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~ 153 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDR 153 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 46788899999876655433323678999986
No 403
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=22.27 E-value=55 Score=26.39 Aligned_cols=33 Identities=6% Similarity=0.039 Sum_probs=24.8
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccchH
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLPH 156 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~ 156 (168)
.-||=||+|.+-++.++.-+--.++++|+|.-.
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 357779999987777766555589999998643
No 404
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=22.25 E-value=60 Score=24.52 Aligned_cols=41 Identities=12% Similarity=0.035 Sum_probs=29.0
Q ss_pred CCCCCeEEEecCC-ccHHHHHHHHHC-CCCeEEEccc-hHHHhhC
Q 030988 120 FEEINQLVDVAGG-LGANISLLVSKY-PQIRGINFDL-PHVIKDA 161 (168)
Q Consensus 120 ~~~~~~vvDvGGg-~G~~~~~l~~~~-P~l~~~v~Dl-P~vi~~a 161 (168)
. .-.+|+-+|+| .|.+++.+++.. |+.++++.|. ++-.+.+
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~ 212 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFA 212 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence 5 55678888865 378888888874 6789888885 5554443
No 405
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.85 E-value=1.7e+02 Score=18.93 Aligned_cols=38 Identities=18% Similarity=0.084 Sum_probs=22.9
Q ss_pred CeEEEecCCc-cHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 124 NQLVDVAGGL-GANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 124 ~~vvDvGGg~-G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
.+++=+|+|. |......+++. +.+++++|. |+.++.++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHH
Confidence 5777787644 44333444433 458889987 66666554
No 406
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=21.80 E-value=38 Score=25.97 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=25.5
Q ss_pred CCeEEEecCCccH----HHHHHHHHCCCCeEEEccchHHH
Q 030988 123 INQLVDVAGGLGA----NISLLVSKYPQIRGINFDLPHVI 158 (168)
Q Consensus 123 ~~~vvDvGGg~G~----~~~~l~~~~P~l~~~v~DlP~vi 158 (168)
+-.+--+|||+|. +...+++.+.-+.+.++=.|..-
T Consensus 99 ~~i~as~GGGTGSG~~~~la~~a~e~g~lt~~vv~~P~~~ 138 (320)
T 1ofu_A 99 VFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPF 138 (320)
T ss_dssp EEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGG
T ss_pred EEEEeecCCCccccHHHHHHHHHHhcCCcEEEEEeCCccc
Confidence 4455689999985 45678888877777676666543
No 407
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=21.56 E-value=1.8e+02 Score=21.94 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=32.6
Q ss_pred HHHHHcCCCCCCCeEEEecCCccHHHHHHHHHCCCCeEEEccchH
Q 030988 112 KILEIYKGFEEINQLVDVAGGLGANISLLVSKYPQIRGINFDLPH 156 (168)
Q Consensus 112 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP~ 156 (168)
.++..+. .....|+|-=+|+|..+.+..+. +-+++.+|+++
T Consensus 234 ~~i~~~~--~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~ 274 (319)
T 1eg2_A 234 RLVRALS--HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAP 274 (319)
T ss_dssp HHHHHHS--CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESST
T ss_pred HHHHHhC--CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCc
Confidence 4555553 33468999999999999999988 68899999965
No 408
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=21.30 E-value=1.6e+02 Score=21.94 Aligned_cols=42 Identities=17% Similarity=0.044 Sum_probs=29.8
Q ss_pred CCCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEccc-hHHHhhCC
Q 030988 120 FEEINQLVDVAGG-LGANISLLVSKYPQIRGINFDL-PHVIKDAP 162 (168)
Q Consensus 120 ~~~~~~vvDvGGg-~G~~~~~l~~~~P~l~~~v~Dl-P~vi~~a~ 162 (168)
...-.+|+-+|+| .|.+++.+++.. ..++++.|. ++-.+.++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~ 207 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLAR 207 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHH
Confidence 5555667767755 589999999987 569988886 55555444
No 409
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=21.21 E-value=57 Score=27.64 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=25.0
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.-||=||||.+-+..++.-+.-+++++++|.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk 58 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVL 58 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEe
Confidence 3577799999987777766667899999986
No 410
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=21.10 E-value=47 Score=27.49 Aligned_cols=31 Identities=16% Similarity=0.069 Sum_probs=22.2
Q ss_pred eEEEecCCccHHHHH--HHHH----CCCCeEEEccch
Q 030988 125 QLVDVAGGLGANISL--LVSK----YPQIRGINFDLP 155 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~--l~~~----~P~l~~~v~DlP 155 (168)
.||=||||.+-++.+ +++. .|+++++|+|.-
T Consensus 37 DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~ 73 (584)
T 2gmh_A 37 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 73 (584)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence 466799999865554 4444 458999999963
No 411
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=20.91 E-value=61 Score=25.54 Aligned_cols=30 Identities=10% Similarity=0.161 Sum_probs=22.2
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.|+=||||..-++.++.-+-.+++++|+|.
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G~~V~llEk 57 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEGANVLLLDK 57 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHHHHHHHHHHHCCCCEEEEEC
Confidence 466699998776666554445789999996
No 412
>3mt1_A Putative carboxynorspermidine decarboxylase prote; PSI2, MCSG, structural genomics; 2.50A {Sinorhizobium meliloti}
Probab=20.71 E-value=33 Score=26.61 Aligned_cols=12 Identities=25% Similarity=0.459 Sum_probs=10.4
Q ss_pred CeEEEecCCccH
Q 030988 124 NQLVDVAGGLGA 135 (168)
Q Consensus 124 ~~vvDvGGg~G~ 135 (168)
..++|||||-|.
T Consensus 191 ~~~ldiGGG~~i 202 (365)
T 3mt1_A 191 VDWVSLGGGIHF 202 (365)
T ss_dssp SSEEECCSCCCT
T ss_pred CCEEEeCCCcCC
Confidence 579999999985
No 413
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=20.48 E-value=16 Score=20.82 Aligned_cols=28 Identities=18% Similarity=0.412 Sum_probs=17.0
Q ss_pred HHHHCCCCeEEEccchHH-HhhCCCCCCC
Q 030988 140 LVSKYPQIRGINFDLPHV-IKDAPSYQGI 167 (168)
Q Consensus 140 l~~~~P~l~~~v~DlP~v-i~~a~~~~~~ 167 (168)
+...+|.++++...+|+. ++..+..|||
T Consensus 25 i~~~~~~I~a~~~~lp~~~~~~L~~~p~V 53 (65)
T 2z30_B 25 IVYQFKLIPAVVVDVPANAVGKLKKMPGV 53 (65)
T ss_dssp EEEECSSSSEEEEEECGGGHHHHHTSTTE
T ss_pred EEEEecCCcEEEEEeCHHHHHHHhcCCCc
Confidence 345677778877777754 4444444544
No 414
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=20.34 E-value=62 Score=26.47 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=24.7
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEccch
Q 030988 124 NQLVDVAGGLGANISLLVSKYPQIRGINFDLP 155 (168)
Q Consensus 124 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~DlP 155 (168)
..||=||||..-++.++.-+-..++++|+|.-
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~ 158 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKE 158 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 35677999998877776666568999999863
No 415
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=20.29 E-value=84 Score=26.76 Aligned_cols=32 Identities=13% Similarity=-0.060 Sum_probs=24.0
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
...||=||||.+-+..+..-+--+.+++++|.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~ 420 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDT 420 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 36799999999876666444334789999986
No 416
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=20.27 E-value=92 Score=24.57 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=24.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 122 EINQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 122 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
....|+=||||..-++.+..-+..+.+++|++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~ 42 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEA 42 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 345788899999877776554445789999985
No 417
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=20.26 E-value=66 Score=26.52 Aligned_cols=30 Identities=13% Similarity=0.077 Sum_probs=22.4
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 125 QLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 125 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
.|+=||||..-++.++.-+.-+++++|+|.
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G~~V~VlEr 80 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGGVGALVLEK 80 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEBS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEcC
Confidence 466799999866666544445899999996
No 418
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=20.16 E-value=39 Score=24.51 Aligned_cols=11 Identities=36% Similarity=0.691 Sum_probs=9.3
Q ss_pred CeEEEecCCcc
Q 030988 124 NQLVDVAGGLG 134 (168)
Q Consensus 124 ~~vvDvGGg~G 134 (168)
..|+|+|||+=
T Consensus 141 ~~viDiGggst 151 (272)
T 3h1q_A 141 GIVVDIGGGTT 151 (272)
T ss_dssp EEEEEECSSCE
T ss_pred EEEEEECCCcE
Confidence 59999999864
No 419
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=20.15 E-value=35 Score=26.42 Aligned_cols=11 Identities=27% Similarity=0.389 Sum_probs=9.1
Q ss_pred CeEEEecCCcc
Q 030988 124 NQLVDVAGGLG 134 (168)
Q Consensus 124 ~~vvDvGGg~G 134 (168)
..|+|+|||+=
T Consensus 216 vlV~D~GgGT~ 226 (404)
T 3i33_A 216 VLIFDLGGGTF 226 (404)
T ss_dssp EEEEEECSSCE
T ss_pred EEEEECCCCcE
Confidence 48999999873
No 420
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=20.04 E-value=44 Score=24.90 Aligned_cols=32 Identities=13% Similarity=0.260 Sum_probs=22.8
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEccc
Q 030988 123 INQLVDVAGGLGANISLLVSKYPQIRGINFDL 154 (168)
Q Consensus 123 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 154 (168)
...|+=||||.+-++.+..-+.-+++++++|.
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 45 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEG 45 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEec
Confidence 35688899999876666443334788888884
No 421
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=20.02 E-value=2.1e+02 Score=19.21 Aligned_cols=80 Identities=11% Similarity=0.076 Sum_probs=46.0
Q ss_pred CchhHHhHhcHH-HHH---HHHHHHHHhhHHHHHHHHHHcCCCCCCCeEEEecCCc-c------HHHHHHHHHCCCCeEE
Q 030988 82 KNPFEYAMKAAR-RRN---LFNQSMHNHAALVMKKILEIYKGFEEINQLVDVAGGL-G------ANISLLVSKYPQIRGI 150 (168)
Q Consensus 82 ~~~~e~~~~~p~-~~~---~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~-G------~~~~~l~~~~P~l~~~ 150 (168)
.+|.+|+....+ ..+ ++.+.|...... +.....+..+.+...|||....- | -....+.+.+|++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~ 89 (167)
T 1z6n_A 12 EDFAAFVGHGLATEQGAVARFRQKLESNGLP--SALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELA 89 (167)
T ss_dssp BCHHHHHHTSCHHHHHHHHHHHHHHHHHCCC--HHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCHHHHHHHhHHHHHHHHHHHHHHHHccCCC--HHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEE
Confidence 677777765443 334 677766543211 12222222255556889987542 1 2445677889999888
Q ss_pred EccchHHHhhCCC
Q 030988 151 NFDLPHVIKDAPS 163 (168)
Q Consensus 151 v~DlP~vi~~a~~ 163 (168)
.+|...--+.+..
T Consensus 90 ~v~~d~~~~~~~~ 102 (167)
T 1z6n_A 90 IISKGRAEDDLRQ 102 (167)
T ss_dssp EECHHHHHHHTTT
T ss_pred EEECCCCHHHHHH
Confidence 8887655444443
Done!