AT1G49420 protein (Arabidopsis thaliana)

STRING 9.05

AT1G49420 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	AT1G49420	metal ion binding; metal ion binding; FUNCTIONS IN- metal ion binding; INVOLVED IN- metal ion transport; LOCATED IN- cellular_component unknown; CONTAINS InterPro DOMAIN/s- Heavy metal transport/detoxification protein (InterPro-IPR006121); BEST Arabidopsis thaliana protein match is- metal ion binding (TAIR-AT4G16380.1); Has 85 Blast hits to 83 proteins in 26 species- Archae - 2; Bacteria - 15; Metazoa - 7; Fungi - 11; Plants - 47; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink). (189 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	RAB18	RAB18 (RESPONSIVE TO ABA 18); Belongs to the dehydrin protein family, which contains highly con [...] (186 aa)	•	0.623
	ACT8	ACT8 (ACTIN 8); copper ion binding / structural constituent of cytoskeleton; Member of a subcla [...] (377 aa)	•	0.599
	ABI1	ABI1 (ABA INSENSITIVE 1); calcium ion binding / protein serine/threonine phosphatase; Involved [...] (434 aa)	•	0.567
	HAB1	HAB1 (HOMOLOGY TO ABI1); catalytic/ protein serine/threonine phosphatase; mutant has ABA hypers [...] (511 aa)	•	0.567
	LTI65	LTI65 (LOW-TEMPERATURE-INDUCED 65); encodes a protein that is induced in expression in response [...] (619 aa)	•	0.467
	ATPANK2	ATPANK2 (PANTOTHENATE KINASE 2); pantothenate kinase; Encodes a protein with pantothenate kinas [...] (901 aa)	•	0.465
	ACT2	ACT2 (ACTIN 2); structural constituent of cytoskeleton; Encodes an actin that is constitutively [...] (377 aa)	•	0.435
	PP2CA	PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA); protein binding / protein serine/threonin [...] (399 aa)	•	0.409
	ATCOAD	ATCOAD (4-phosphopantetheine adenylyltransferase); nucleotidyltransferase/ pantetheine-phosphat [...] (176 aa)	•	0.409

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink