Query 030989
Match_columns 168
No_of_seqs 37 out of 39
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 11:50:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030989.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030989hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cc8a_ d.58.17.1 (A:) ATX1 me 60.9 5.9 0.00043 24.5 4.2 39 3-43 32-70 (72)
2 d1qupa2 d.58.17.1 (A:2-73) Cop 38.1 14 0.001 22.4 3.2 36 3-39 33-68 (72)
3 d2c7fa1 b.71.1.2 (A:2-16,A:387 35.7 10 0.00073 25.7 2.3 42 7-48 44-88 (131)
4 d1b8ta1 g.39.1.3 (A:1-35) Cyst 35.1 6.1 0.00044 23.5 1.0 19 139-161 3-22 (35)
5 d1qw9a1 b.71.1.2 (A:5-17,A:385 28.8 22 0.0016 23.9 3.2 43 7-49 42-87 (130)
6 d2vxfa1 b.38.1.5 (A:6-85) LSM1 22.9 22 0.0016 23.8 2.2 41 9-50 25-78 (80)
7 d2ctfa1 d.51.1.1 (A:7-96) Vigi 22.3 7.4 0.00054 25.0 -0.4 37 5-43 11-47 (90)
8 d1fe0a_ d.58.17.1 (A:) ATX1 me 20.0 74 0.0054 18.7 4.2 35 6-42 30-64 (66)
9 d1urra_ d.58.10.1 (A:) Acylpho 17.0 76 0.0056 19.8 3.9 43 3-46 34-81 (97)
10 d1eeja1 c.47.1.9 (A:61-216) Di 15.9 33 0.0024 22.6 1.8 20 6-26 19-38 (156)
No 1
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.86 E-value=5.9 Score=24.51 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=31.1
Q ss_pred cccceecccCCeEEEEEeecChhhhhhhhcccCCCceeeEE
Q 030989 3 IQDQLFDEKTNTVTIKVVSCSPENIRDKLSCKGEGSIKSIE 43 (168)
Q Consensus 3 Irdq~yDEK~NtVtIkVVcc~PEKI~~KL~CKG~~~IK~IE 43 (168)
+.+...|-.+++|+|.+- -++++|.+.|. |.|..+++=|
T Consensus 32 V~~v~v~~~~~~v~V~~~-~~~~~i~~~i~-~~G~~~~~~~ 70 (72)
T d1cc8a_ 32 VSKIDISLEKQLVDVYTT-LPYDFILEKIK-KTGKEVRSGK 70 (72)
T ss_dssp EEEEEEETTTTEEEEEES-SCHHHHHHHHH-TTSSCEEEEE
T ss_pred eEEEEEECCCCEEEEeec-CCHHHHHHHHH-HHCCccCCce
Confidence 456678889999999995 69999999996 6676666543
No 2
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.11 E-value=14 Score=22.45 Aligned_cols=36 Identities=22% Similarity=0.388 Sum_probs=28.9
Q ss_pred cccceecccCCeEEEEEeecChhhhhhhhcccCCCce
Q 030989 3 IQDQLFDEKTNTVTIKVVSCSPENIRDKLSCKGEGSI 39 (168)
Q Consensus 3 Irdq~yDEK~NtVtIkVVcc~PEKI~~KL~CKG~~~I 39 (168)
|.+...|-..++|+|.+- .+++.|.++|.=-|-+++
T Consensus 33 V~~v~vdl~~~~v~V~~~-~~~~~i~~~I~~~G~~A~ 68 (72)
T d1qupa2 33 INSLNFDIEQQIMSVESS-VAPSTIINTLRNCGKDAI 68 (72)
T ss_dssp EEEEEEETTTTEEEEEES-SCHHHHHHHHHHTTCCCE
T ss_pred eeEEEEECCCCEEEEEee-CCHHHHHHHHHHhCCCEE
Confidence 456677889999999984 699999999977666554
No 3
>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]}
Probab=35.66 E-value=10 Score=25.66 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=26.0
Q ss_pred eecccCCeEEEEEeecChhh-hhhhhccc--CCCceeeEEEeCCC
Q 030989 7 LFDEKTNTVTIKVVSCSPEN-IRDKLSCK--GEGSIKSIEILEPA 48 (168)
Q Consensus 7 ~yDEK~NtVtIkVVcc~PEK-I~~KL~CK--G~~~IK~IEI~~Pp 48 (168)
+||++++.|+|++|-.+++. +.=.|--. +...+-+..++.-+
T Consensus 44 ~~d~~~g~l~i~vVNrs~~e~~~v~i~l~g~~~~~~~e~~~L~~~ 88 (131)
T d2c7fa1 44 IYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKDYRLLEHIVLEHQ 88 (131)
T ss_dssp EEETTTTEEEEEEECCCTTSCEEEEEEESCC---CEEEEEEECCS
T ss_pred EEcCCCCEEEEEEEECCCCcCEEEEEEecCCCcccEEEEEEEeCC
Confidence 68999999999999998754 33344333 33344445566543
No 4
>d1b8ta1 g.39.1.3 (A:1-35) Cysteine-rich (intestinal) protein, CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=35.10 E-value=6.1 Score=23.46 Aligned_cols=19 Identities=32% Similarity=0.613 Sum_probs=11.8
Q ss_pred hcCCCCCCceeeeecCCC-ccccC
Q 030989 139 SWGGSCDNRVYCRGRSSD-CTCEE 161 (168)
Q Consensus 139 s~gg~c~~~~~c~~~~~d-~~~ee 161 (168)
.|||| ..|-.-... ||.||
T Consensus 3 n~ggg----~kcg~c~ktvy~aee 22 (35)
T d1b8ta1 3 NWGGG----KKCGVCQKAVYFAEE 22 (35)
T ss_dssp CCCCC----EECTTTCCEECSSCC
T ss_pred ccCCC----ceeccccceEeeeee
Confidence 59998 566443333 77776
No 5
>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=28.77 E-value=22 Score=23.90 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=28.6
Q ss_pred eecccCCeEEEEEeecChh-hhhhhhcccC--CCceeeEEEeCCCC
Q 030989 7 LFDEKTNTVTIKVVSCSPE-NIRDKLSCKG--EGSIKSIEILEPAG 49 (168)
Q Consensus 7 ~yDEK~NtVtIkVVcc~PE-KI~~KL~CKG--~~~IK~IEI~~Ppk 49 (168)
.||+++++|+|+||-.+++ .+.=.|--.| ...+-++.++.-+.
T Consensus 42 t~d~~~~~l~v~vVNr~~~e~~~v~i~l~g~~~~~~~~~~~L~~~d 87 (130)
T d1qw9a1 42 VYNEEKEEVTIFAVNRDMEDALLLECDVRSFEDYRVIEHIVLEHDN 87 (130)
T ss_dssp EEETTTTEEEEEEEECCSSCCEEEEEECTTSCSCEEEEEEEECCSC
T ss_pred EEeCCCCEEEEEEEECCCCcCeEEEEEccCCCccceEEEEEEeCCC
Confidence 6889999999999998876 3443444444 33444566666543
No 6
>d2vxfa1 b.38.1.5 (A:6-85) LSM14 homolog A (Lsm14a) {Zebrafish (Danio rerio) [TaxId: 7955]}
Probab=22.87 E-value=22 Score=23.76 Aligned_cols=41 Identities=24% Similarity=0.423 Sum_probs=25.0
Q ss_pred cccCCeEEEEEee-cChhh------------hhhhhcccCCCceeeEEEeCCCCC
Q 030989 9 DEKTNTVTIKVVS-CSPEN------------IRDKLSCKGEGSIKSIEILEPAGK 50 (168)
Q Consensus 9 DEK~NtVtIkVVc-c~PEK------------I~~KL~CKG~~~IK~IEI~~PpkP 50 (168)
|..+.||+++=|- +--|- +-+-+.=+|. -||+++|.++|+|
T Consensus 25 d~~~sTi~L~nVrsfGTEgR~~~~~ipp~~~vy~~IvFrgs-DIKdL~v~e~p~p 78 (80)
T d2vxfa1 25 DTENSTVALAKVRSFGTEDRPTDRPIAPRDETFEYIIFRGS-DIKDLTVCEPPKP 78 (80)
T ss_dssp ETTTTEEEEEEEEECCSTTSCCSSCCCCCCCCEEEEEEETT-TEEEEEESSCCCC
T ss_pred ccccCEEEeeeeeEeecCCCCCCCccCCCCcceeEEEEcCc-CcceEEeccCCCC
Confidence 5677888887543 33232 2223334444 6999999997655
No 7
>d2ctfa1 d.51.1.1 (A:7-96) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.32 E-value=7.4 Score=24.97 Aligned_cols=37 Identities=11% Similarity=0.202 Sum_probs=29.2
Q ss_pred cceecccCCeEEEEEeecChhhhhhhhcccCCCceeeEE
Q 030989 5 DQLFDEKTNTVTIKVVSCSPENIRDKLSCKGEGSIKSIE 43 (168)
Q Consensus 5 dq~yDEK~NtVtIkVVcc~PEKI~~KL~CKG~~~IK~IE 43 (168)
..++++.++.+|++| .=|.+....|.=+||.+|+.|+
T Consensus 11 ~~~~~~~~~~~t~~v--~VP~~~h~~iIG~~G~~I~~i~ 47 (90)
T d2ctfa1 11 TEVYAKANSFTVSSV--AAPSWLHRFIIGKKGQNLAKIT 47 (90)
T ss_dssp CCCCCCCCCCEEEEE--ECCSTTHHHHHTTTTCHHHHHH
T ss_pred HHHHHHcCCcEEEEE--EcCHHHHhhcCCCCchhHHHHH
Confidence 345777888888887 3588888889999999988764
No 8
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=19.97 E-value=74 Score=18.74 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=26.8
Q ss_pred ceecccCCeEEEEEeecChhhhhhhhcccCCCceeeE
Q 030989 6 QLFDEKTNTVTIKVVSCSPENIRDKLSCKGEGSIKSI 42 (168)
Q Consensus 6 q~yDEK~NtVtIkVVcc~PEKI~~KL~CKG~~~IK~I 42 (168)
...|-.+++|+|.+- .+++.|.++|. ++|...+-|
T Consensus 30 v~v~~~~~~v~V~~~-~~~~~i~~~I~-~~Gy~a~li 64 (66)
T d1fe0a_ 30 YDIDLPNKKVCIESE-HSMDTLLATLK-KTGKTVSYL 64 (66)
T ss_dssp EEEETTTTEEEEEES-SCHHHHHHHHH-TTTSCEEEE
T ss_pred EEEEcCCCEEEEEee-CCHHHHHHHHH-HhCCeEEEe
Confidence 456788999999984 69999999996 566555433
No 9
>d1urra_ d.58.10.1 (A:) Acylphosphatase 2 (Cg18505) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=16.99 E-value=76 Score=19.79 Aligned_cols=43 Identities=9% Similarity=0.142 Sum_probs=29.6
Q ss_pred cccceecccCCeEEEEEeecChhhhhh--hhcccCC---CceeeEEEeC
Q 030989 3 IQDQLFDEKTNTVTIKVVSCSPENIRD--KLSCKGE---GSIKSIEILE 46 (168)
Q Consensus 3 Irdq~yDEK~NtVtIkVVcc~PEKI~~--KL~CKG~---~~IK~IEI~~ 46 (168)
|.-+.-+..+++|.|.+- .+.+.|.+ +.+.+++ -.|++|++.+
T Consensus 34 l~G~V~N~~dG~Vei~~q-G~~~~i~~f~~~l~~~~p~~a~V~~i~~~~ 81 (97)
T d1urra_ 34 VRGWCMNTRDGTVKGQLE-APMMNLMEMKHWLENNRIPNAKVSKAEFSQ 81 (97)
T ss_dssp CEEEEEECTTSCEEEEEE-ECHHHHHHHHHHHHHCCSTTCEEEEEEECC
T ss_pred CEEEEEECCCCCEEEEEE-cCHHHHHHHHHHHhhCCCCCcEEEEEEEEE
Confidence 556677888999999985 48888754 2233443 3588888754
No 10
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=15.93 E-value=33 Score=22.60 Aligned_cols=20 Identities=10% Similarity=0.071 Sum_probs=16.3
Q ss_pred ceecccCCeEEEEEeecChhh
Q 030989 6 QLFDEKTNTVTIKVVSCSPEN 26 (168)
Q Consensus 6 q~yDEK~NtVtIkVVcc~PEK 26 (168)
++|..++.++||.+ |+|+++
T Consensus 19 iv~g~~~ak~tIv~-FsD~~C 38 (156)
T d1eeja1 19 IVYKAPQEKHVITV-FTDITC 38 (156)
T ss_dssp EEECCTTCCEEEEE-EECTTC
T ss_pred eeecCCCCCEEEEE-EeCCCC
Confidence 56899999999988 678763
Done!