BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030996
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 134/187 (71%), Gaps = 22/187 (11%)
Query: 1 MSSPCKRREMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYP 60
MSSP KRREMD+MKLMMSDY VE INDG+ E VEF GPKDS+YEGG+WKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPL 100
YKSPS+GF+ KI+HPNVDE+SGSVCLDVINQTWSPMF DPL
Sbjct: 61 YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 101 NGDAASLMMKDRKQYEQRVKEYCERYAKKENISSINSEETDEDISNEDISDGQSTSSDDN 160
NG+AA+LMM+DR YEQRVKEYCE+YAK + +D+++S ++ + D
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR--ADTEEMSSDDEMSEDEYASDGDDEDDVA 178
Query: 161 IAGVADP 167
IAG DP
Sbjct: 179 IAGKLDP 185
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/148 (72%), Positives = 119/148 (80%), Gaps = 20/148 (13%)
Query: 1 MSSPCKRREMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYP 60
MSSP KRREMD+MKLMMSDY VE INDG+ E VEF+GPKDSLY+GG+WKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPL 100
YKSPS+GF+ KI+HPNVDELSGSVCLDVINQTWSPMF DPL
Sbjct: 61 YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 101 NGDAASLMMKDRKQYEQRVKEYCERYAK 128
NG+AA+LMM+DR YEQRVKEYCE+YAK
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAK 148
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4
PE=1 SV=1
Length = 184
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 138/188 (73%), Gaps = 25/188 (13%)
Query: 1 MSSPCKRREMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYP 60
MSSP KRREMD+MKLMMSDY V+ INDG+ E V FHGPKDS+Y+GG+WK+RVEL +AYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60
Query: 61 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPL 100
YKSPSIGF NKI+HPNVDE+SGSVCLDVINQTWSPMF DPL
Sbjct: 61 YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120
Query: 101 NGDAASLMMKDRKQYEQRVKEYCERYAKKENISSINSEETDEDISNEDISDGQST-SSDD 159
NG+AASLMM+D+ YE +VKEYCERYAK E+IS EE S+E++SD + S D+
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEE----SDEELSDAEGYDSGDE 176
Query: 160 NIAGVADP 167
I G ADP
Sbjct: 177 AIMGHADP 184
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 115/152 (75%), Gaps = 20/152 (13%)
Query: 1 MSSPCKRREMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYP 60
M+SP KRREMD+MKLMMSDY V+ +ND + V FHGP DSLY+GG+WKI+VELP+AYP
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60
Query: 61 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPL 100
YKSPS+GFVNKI+HPNVDE SG+VCLDVINQTWSPMF DP
Sbjct: 61 YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120
Query: 101 NGDAASLMMKDRKQYEQRVKEYCERYAKKENI 132
NG+AASL+M+DR YE +VKEYCE+YAK E I
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEI 152
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 121/186 (65%), Gaps = 25/186 (13%)
Query: 1 MSSPCKRREMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYP 60
MSSP +R E DVMKL+MSDY V +ND + E V FHGP ++ Y GGIWK+ VELP YP
Sbjct: 1 MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60
Query: 61 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPL 100
+KSPSIGFVN+IFHPN+DELSGSVCLDVINQTWSPMF DPL
Sbjct: 61 WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120
Query: 101 NGDAASLMMKDRKQYEQRVKEYCERYAKKENISSINSEETDEDISNEDISDGQSTSSDDN 160
NG+AA+L++++ Y +V++Y RYA KE +++ T D S++D T S D
Sbjct: 121 NGEAAALLLREPNTYYAKVRDYIARYANKE-----DADITLNDSSDDDTMSSIDTESGDE 175
Query: 161 IAGVAD 166
IAG D
Sbjct: 176 IAGPMD 181
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC8 PE=1 SV=2
Length = 218
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 107/150 (71%), Gaps = 20/150 (13%)
Query: 1 MSSPCKRREMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYP 60
MSS +R E DVMKL+MSD+ V+ IND + E V+F GPKD+ YE G+W++ VELPD YP
Sbjct: 1 MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYP 60
Query: 61 YKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPL 100
YKSPSIGFVNKIFHPN+D SGS+CLDVIN TWSP++ DPL
Sbjct: 61 YKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPL 120
Query: 101 NGDAASLMMKDRKQYEQRVKEYCERYAKKE 130
N +AA+L ++D+K YE+++KEY ++YA KE
Sbjct: 121 NNEAATLQLRDKKLYEEKIKEYIDKYATKE 150
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 107/151 (70%), Gaps = 22/151 (14%)
Query: 3 SPCKRR-EMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPY 61
SP KRR + DV+KL+ S + V I G++E V+F+GP+ + YEGG+WK+RV+LPD YP+
Sbjct: 5 SPGKRRMDTDVVKLIESKHEVT-ILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 63
Query: 62 KSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPLN 101
KSPSIGF+NKIFHPN+DE SG+VCLDVINQTW+ ++ DPLN
Sbjct: 64 KSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLN 123
Query: 102 GDAASLMMKDRKQYEQRVKEYCERYAKKENI 132
GDAA++ + ++Y+Q++KEY ++YA +E +
Sbjct: 124 GDAAAMYLHRPEEYKQKIKEYIQKYATEEAL 154
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 107/151 (70%), Gaps = 22/151 (14%)
Query: 3 SPCKRR-EMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPY 61
SP KRR + DV+KL+ S + V I G++E V+F+GP+ + YEGG+WK+RV+LPD YP+
Sbjct: 5 SPGKRRMDTDVVKLIESKHEVT-ILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 63
Query: 62 KSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPLN 101
KSPSIGF+NKIFHPN+DE SG+VCLDVINQTW+ ++ DPLN
Sbjct: 64 KSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLN 123
Query: 102 GDAASLMMKDRKQYEQRVKEYCERYAKKENI 132
GDAA++ + ++Y+Q++KEY ++YA +E +
Sbjct: 124 GDAAAMYLHRPEEYKQKIKEYIQKYATEEAL 154
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 107/151 (70%), Gaps = 22/151 (14%)
Query: 3 SPCKRR-EMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPY 61
SP KRR + DV+KL+ S + V I G++E V+F+GP+ + YEGG+WK+RV+LPD YP+
Sbjct: 5 SPGKRRMDTDVVKLIESKHEVT-ILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 63
Query: 62 KSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF--------------------DPLN 101
KSPSIGF+NKIFHPN+DE SG+VCLDVINQTW+ ++ DPLN
Sbjct: 64 KSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLN 123
Query: 102 GDAASLMMKDRKQYEQRVKEYCERYAKKENI 132
GDAA++ + ++Y+Q++KEY ++YA +E +
Sbjct: 124 GDAAAMYLHRPEEYKQKIKEYIQKYATEEAL 154
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
M++P +RR M K + D S P D I + GP+++ +E G +K+ +E
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ F++K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVKFISKMFHPNV-YADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L ++R++YE+RV++ E+
Sbjct: 120 SPANSLAAQLYQENRREYEKRVQQIVEQ 147
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D S P ++ I GP D+ +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ FV+K+FHPNV G +CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFVSKVFHPNV-YADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L ++R++YE+RVK E+
Sbjct: 120 SPANSTAAQLYKENRREYEKRVKACVEQ 147
>sp|O74810|UBC1_SCHPO Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc1 PE=3 SV=2
Length = 217
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 11 DVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVN 70
DV + + V IND IS LK F GP+ + YEGG + + +E+P YP++ P + F
Sbjct: 15 DVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDT 74
Query: 71 KIFHPNVDELSGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKD 111
KI+HPNV +G++CLD++ WSP++ +P + A + +++
Sbjct: 75 KIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQN 134
Query: 112 RKQYEQRVKEYCERYAKKENISSINSEETD 141
+Q+ + +E+ YA +++E T+
Sbjct: 135 YQQFVRTAREWTSSYAAAPAGVDLDAENTE 164
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + V P YP+K P I F KI+HPN++
Sbjct: 22 SAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL D A + D+++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + V P YP+K P I F KI+HPN++
Sbjct: 22 SAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL D A + D+++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + V P YP+K P I F KI+HPN++
Sbjct: 22 SAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL D A + D+++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + V P YP+K P I F KI+HPN++
Sbjct: 22 SAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL D A + D+++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+ +RR M K + SD S P+ + I + GP DS++EG +K+ ++
Sbjct: 1 MSTAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP +P++ F++K+FHPNV GS+CLD++ WSP++D
Sbjct: 61 EEYPNDAPTVKFLSKMFHPNV-YADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N ++A L +++++Y ++VKE E+
Sbjct: 120 SPANSESARLFRENKREYNRKVKEIVEQ 147
>sp|Q6BU36|UBC2_DEBHA Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=UBC2 PE=3 SV=1
Length = 168
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 24/147 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P KRR M K M D S P+ D + GP D+ +E G +++ ++
Sbjct: 1 MSTPAKRRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFD 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K PS+ F++++FHPNV SG +CLD++ WSP +D
Sbjct: 61 EQYPNKPPSVKFISEMFHPNV-YASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNIS 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCE 124
P N +AA+L R QY +RV+E E
Sbjct: 120 SPANVEAANLYKDHRSQYIKRVRETVE 146
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 23/152 (15%)
Query: 1 MSSPCKRREMDVMKLM---MSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPD 57
M+S KR + KL+ + + EP +D + +V GP+ S YE GI+++ + LPD
Sbjct: 1 MASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPD 60
Query: 58 AYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMF-------------------D 98
YP ++P + F+ KI+HPN+D L G +CLDV+ WSP D
Sbjct: 61 DYPMEAPKVRFLTKIYHPNIDRL-GRICLDVLKTNWSPALQIRTVLLSIQALLASPNPND 119
Query: 99 PLNGDAASLMMKDRKQYEQRVKEYCERYAKKE 130
PL D A +K+ + + + +E+ + YAKK+
Sbjct: 120 PLANDVAEDWIKNEQGAKAKAREWTKLYAKKK 151
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSDYSV----EPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D V P + I + GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ F++K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L +++++YE+RV E+
Sbjct: 120 SPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSDYSV----EPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D V P + I + GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ F++K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L +++++YE+RV E+
Sbjct: 120 SPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSDYSV----EPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D V P + I + GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ F++K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L +++++YE+RV E+
Sbjct: 120 SPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSDYSV----EPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D V P + I + GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ F++K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L +++++YE+RV E+
Sbjct: 120 SPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSDYSV----EPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D V P + I + GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ F++K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L +++++YE+RV E+
Sbjct: 120 SPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P06104|UBC2_YEAST Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD6 PE=1 SV=1
Length = 172
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K M D S P+ D + GP D+ YE G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFD 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P + F++++FHPNV +G +CLD++ W+P +D
Sbjct: 61 EEYPNKPPHVKFLSEMFHPNV-YANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPA 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +AA+L + QY +RVKE E+
Sbjct: 120 SPANVEAATLFKDHKSQYVKRVKETVEK 147
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC5 PE=1 SV=1
Length = 148
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y GG++ + + P YP+K P + F KI+HPN++
Sbjct: 23 SAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINS- 81
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
SG++CLD++ WSP DPL + A + D+ +YE KE
Sbjct: 82 SGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKE 141
Query: 122 YCERYA 127
+ ++YA
Sbjct: 142 WTKKYA 147
>sp|Q6CUD9|UBC2_KLULA Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=UBC2 PE=3 SV=1
Length = 164
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K M D S P+ D + GP D+ YE G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFD 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P + F++++FHPNV +G +CLD++ W+P +D
Sbjct: 61 EEYPNKPPHVKFLSEMFHPNV-YANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPA 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +AA+L + QY +RVKE E+
Sbjct: 120 SPANVEAATLFQDHKSQYVKRVKETVEK 147
>sp|Q75EB8|UBC2_ASHGO Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC2
PE=3 SV=1
Length = 170
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K M D S P+ D + GP D+ YE G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFD 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P + F++++FHPNV +G +CLD++ W+P +D
Sbjct: 61 EEYPNKPPHVKFLSEMFHPNV-YANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPA 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +AA+L + QY +RVKE E+
Sbjct: 120 SPANVEAATLFKDHKSQYVKRVKETVEK 147
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D S P + I GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ FV+K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L +++++YE+RV E+
Sbjct: 120 SPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K + D S P + I GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ FV+K+FHPNV GS+CLD++ WSP +D
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N AA L +++++YE+RV E+
Sbjct: 120 SPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=UBC2 PE=3 SV=1
Length = 169
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 24/147 (16%)
Query: 1 MSSPCKRREMDVMKLMMSDYSV----EPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+ KRR + K + SD + P D I GP ++ +E G +++ +
Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFT 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
DAYP K P++ F++K+FHPN+ +G +CLD++ WSP +D
Sbjct: 61 DAYPNKPPTVRFISKMFHPNI-YANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPA 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCE 124
P N DAA L ++ K+YE+RVK+ E
Sbjct: 120 SPANVDAAQLFKENLKEYERRVKKTVE 146
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 24/147 (16%)
Query: 1 MSSPCKRREMDVMKLMMSDYSV----EPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+ KRR + K + SD + P D I GP ++ +E G +++ +
Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFT 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
DAYP K P++ F++K+FHPN+ +G +CLD++ WSP +D
Sbjct: 61 DAYPNKPPTVRFISKMFHPNI-YANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPA 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCE 124
P N DAA L ++ K+YE+RVK+ E
Sbjct: 120 SPANVDAAQLFKENLKEYERRVKKTVE 146
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P ++R M K + D S P ++ I GP D+ ++GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ FV+++FHPN+ GS+CLD++ WSP++D
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +AA + +++++Y +RV+E E+
Sbjct: 120 SPANSEAARMFSENKREYNRRVREVVEQ 147
>sp|Q9VTY6|UBE2C_DROME Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih
PE=1 SV=1
Length = 178
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 24/143 (16%)
Query: 6 KRREMDVMKLMMSD---YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYK 62
KR ++M LMM++ S P + I + GP++++Y G +++ ++ P++YPY
Sbjct: 35 KRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYA 94
Query: 63 SPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD-------------------PLNGD 103
+P + F+ FHPNVD L G++CLD++ WS ++D PLN
Sbjct: 95 APVVKFLTSCFHPNVD-LQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQ 153
Query: 104 AASLMMKDRKQYEQRVKEYCERY 126
AA +M D+K+Y++ + + E++
Sbjct: 154 AA-MMWNDQKEYKKYLDAFYEKH 175
>sp|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC4 PE=1 SV=1
Length = 148
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y GG++ + + P YP+K P I F KI+HPN++
Sbjct: 23 SAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINA- 81
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+G++CLD++ WSP DPL + A + DR +YE +E
Sbjct: 82 NGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATARE 141
Query: 122 YCERYA 127
+ ++YA
Sbjct: 142 WTKKYA 147
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + + P YP+K P + F KI+HPN++
Sbjct: 22 SAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL + A DR++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P ++R M K + D S P ++ I+ GP D+ ++GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ FV+++FHPN+ GS+CLD++ WSP++D
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +AA + +++++Y ++V+E E+
Sbjct: 120 SPANSEAARMYSENKREYNRKVREVVEQ 147
>sp|P43102|UBC4_CANAX Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2
SV=1
Length = 147
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 20/129 (15%)
Query: 18 SDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNV 77
S S P+ D + + GP DS Y GG++ + + P YP K P I KI+HPN+
Sbjct: 19 SSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNI 78
Query: 78 DELSGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQR 118
+ +G++CLD++ WSP DPL + A + +DRK+YE
Sbjct: 79 NS-NGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEAT 137
Query: 119 VKEYCERYA 127
KE+ ++YA
Sbjct: 138 AKEWTKKYA 146
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P +RR M K M D S P+ D + GP D+ YE G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFD 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P + F++++FHPNV +G +CLD++ W+P +D
Sbjct: 61 EDYPNKPPHVKFLSEMFHPNV-YANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPA 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +AA+L + QY +RVKE E+
Sbjct: 120 SPANVEAATLFKDHKSQYIKRVKETVEK 147
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP +S Y+GG++ + + P YP+K P + F +I+HPN++
Sbjct: 22 SAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL + A + DR++Y Q +E
Sbjct: 81 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+P ++R M K + D S P ++ I GP D+ ++GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P++ FV+++FHPN+ GS+CLD++ WSP++D
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +AA + + +++Y +RV+E E+
Sbjct: 120 SPANSEAARMFSESKREYNRRVREVVEQ 147
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica
GN=UBC5A PE=2 SV=1
Length = 147
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ + + + GP DS Y GG++ + + P YP+K P + F K+FHPN++
Sbjct: 22 SAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL + A + DR +YE +
Sbjct: 81 NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYENTART 140
Query: 122 YCERYA 127
+ +RYA
Sbjct: 141 WTQRYA 146
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 7 RREMDVMKLMMSDYSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSI 66
R D+ K S S P+ D + + GP DS Y GG++ + + P YP+K P +
Sbjct: 8 RELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKV 67
Query: 67 GFVNKIFHPNVDELSGSVCLDVINQTWSPMF-------------------DPLNGDAASL 107
F +I+HPN++ +GS+CLD++ WSP DPL + A +
Sbjct: 68 NFTTRIYHPNINS-NGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHV 126
Query: 108 MMKDRKQYEQRVKEYCERYA 127
DR +YE +E+ +YA
Sbjct: 127 YKTDRSRYELSAREWTRKYA 146
>sp|Q58FS2|UBC2_TRIHA Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2
PE=2 SV=1
Length = 151
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+ +RR M K M +D S PI D + GP D+ +E G +++ ++
Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFE 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P + F++++FHPNV +G +CLD++ WSP +D
Sbjct: 61 EQYPNKPPQVKFISQMFHPNV-YANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTG 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +A++L +R++Y +RV+E ER
Sbjct: 120 SPANVEASNLYKDNRREYIKRVRETVER 147
>sp|P78717|UBC2_NECHA Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2
PE=3 SV=1
Length = 151
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 24/148 (16%)
Query: 1 MSSPCKRREMDVMKLMMSD----YSVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELP 56
MS+ +RR M K M +D S P+ D + GP D+ +E G +++ ++
Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFE 60
Query: 57 DAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQTWSPMFD------------------ 98
+ YP K P + F++++FHPNV +G +CLD++ WSP +D
Sbjct: 61 EQYPNKPPQVKFISEMFHPNV-YATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTG 119
Query: 99 -PLNGDAASLMMKDRKQYEQRVKEYCER 125
P N +A++L +RK+Y +RV+E E+
Sbjct: 120 SPANVEASNLYKDNRKEYTKRVRETVEK 147
>sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28
PE=2 SV=1
Length = 148
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ + + + GP DS Y GG++ + + P YP+K P + F K+FHPNV+
Sbjct: 22 SAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ + WSP DPL + A + DR +YE +
Sbjct: 81 NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARS 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + + P YP+K P + F +I+HPN++
Sbjct: 22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL + A + DR++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + + P YP+K P + F +I+HPN++
Sbjct: 22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL + A + DR++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + + P YP+K P + F +I+HPN++
Sbjct: 22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL + A + DR++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 21 SVEPINDGISELKVEFHGPKDSLYEGGIWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEL 80
S P+ D + + GP DS Y+GG++ + + P YP+K P + F +I+HPN++
Sbjct: 22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 80
Query: 81 SGSVCLDVINQTWSPMF-------------------DPLNGDAASLMMKDRKQYEQRVKE 121
+GS+CLD++ WSP DPL + A + DR++Y + +E
Sbjct: 81 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIARE 140
Query: 122 YCERYA 127
+ ++YA
Sbjct: 141 WTQKYA 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,277,467
Number of Sequences: 539616
Number of extensions: 2703666
Number of successful extensions: 9036
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 8358
Number of HSP's gapped (non-prelim): 445
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)