Your job contains 1 sequence.
>030997
MSLSSITGSRQSSTLPLSRLSWQTLTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKT
KSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVA
GEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030997
(167 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006101 - symbol:LPA19 "AT1G05385" species:3... 531 4.0e-51 1
UNIPROTKB|P74367 - symbol:slr1645 "Photosystem II 11 kDa ... 137 2.2e-09 1
TAIR|locus:2020788 - symbol:PSB27 "AT1G03600" species:370... 133 5.9e-09 1
>TAIR|locus:505006101 [details] [associations]
symbol:LPA19 "AT1G05385" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009543 "chloroplast thylakoid
lumen" evidence=IDA] [GO:0010207 "photosystem II assembly"
evidence=IMP] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
EMBL:CP002684 EMBL:AC005106 GO:GO:0009543 GO:GO:0010207
InterPro:IPR025585 Pfam:PF13326 EMBL:AF370242 EMBL:AY142580
IPI:IPI00527638 PIR:G86188 RefSeq:NP_563737.1 UniGene:At.15340
ProteinModelPortal:Q9ZVZ9 SMR:Q9ZVZ9 STRING:Q9ZVZ9 PRIDE:Q9ZVZ9
EnsemblPlants:AT1G05385.1 GeneID:837040 KEGG:ath:AT1G05385
TAIR:At1g05385 InParanoid:Q9ZVZ9 OMA:AKFRRSA PhylomeDB:Q9ZVZ9
ProtClustDB:PLN00061 ArrayExpress:Q9ZVZ9 Genevestigator:Q9ZVZ9
Uniprot:Q9ZVZ9
Length = 199
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 107/138 (77%), Positives = 121/138 (87%)
Query: 30 VQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDP 89
+QA+ DE E GVVGA K+LFDPNE+TKSGK LPKAYLKSARE+VKT+RESLKE+P
Sbjct: 63 LQAQASEEKLDEGE-GVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENP 121
Query: 90 KDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLP 149
KD A FRR+AD+AKESIRDYLSNWRGQKTVAGEESYVELE IR+LA FYSKAGPSAPLP
Sbjct: 122 KDNAKFRRSADAAKESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLP 181
Query: 150 GEVKSEILNDLDTAEKFL 167
EVK+EIL+DL+ AE+FL
Sbjct: 182 DEVKTEILDDLNKAEEFL 199
>UNIPROTKB|P74367 [details] [associations]
symbol:slr1645 "Photosystem II 11 kDa protein"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0030096 "plasma membrane-derived thylakoid photosystem II"
evidence=IDA] EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0015979
GO:GO:0030096 EMBL:D82936 PIR:S76203 RefSeq:NP_441782.1
RefSeq:YP_005651841.1 PDB:2KMF PDB:2KND PDBsum:2KMF PDBsum:2KND
IntAct:P74367 STRING:P74367 GeneID:12254497 GeneID:952144
KEGG:syn:slr1645 KEGG:syy:SYNGTS_1888 PATRIC:23841050
eggNOG:NOG09648 HOGENOM:HOG000232641 KO:K08902 OMA:AGHYKNF
ProtClustDB:CLSK893279 EvolutionaryTrace:P74367 InterPro:IPR025585
InterPro:IPR017488 Pfam:PF13326 TIGRFAMs:TIGR03044 Uniprot:P74367
Length = 134
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 31/104 (29%), Positives = 58/104 (55%)
Query: 62 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 121
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 27 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 85
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+
Sbjct: 86 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAER 128
>TAIR|locus:2020788 [details] [associations]
symbol:PSB27 "AT1G03600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0030095 "chloroplast
photosystem II" evidence=ISS] [GO:0009543 "chloroplast thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0010206
"photosystem II repair" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC002560 GO:GO:0009535
GO:GO:0009543 GO:GO:0010206 eggNOG:NOG09648 KO:K08902
InterPro:IPR025585 Pfam:PF13326 UniGene:At.15585 EMBL:AF370539
EMBL:AY044332 EMBL:AY114570 EMBL:AF324690 EMBL:AY084551
IPI:IPI00531916 PIR:T00900 RefSeq:NP_563687.1 UniGene:At.74159
ProteinModelPortal:Q9LR64 SMR:Q9LR64 IntAct:Q9LR64 STRING:Q9LR64
PaxDb:Q9LR64 PRIDE:Q9LR64 ProMEX:Q9LR64 EnsemblPlants:AT1G03600.1
GeneID:839449 KEGG:ath:AT1G03600 TAIR:At1g03600
HOGENOM:HOG000012510 InParanoid:Q9LR64 OMA:IPAKRKA PhylomeDB:Q9LR64
ProtClustDB:PLN00064 Genevestigator:Q9LR64 Uniprot:Q9LR64
Length = 174
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 26/98 (26%), Positives = 54/98 (55%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+K ++ +R +L D N +E+ +++ +R +K + G+ S+ ++
Sbjct: 74 YIKDTSAVISKVRSTLSMQKTD-PNVADAVAELREASNSWVAKYRKEKALLGKASFRDIY 132
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ +++ Y GP+AP+P + K+ IL +++TAEK L
Sbjct: 133 SALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKAL 170
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.307 0.125 0.338 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 167 167 0.00075 108 3 11 23 0.37 33
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 559 (59 KB)
Total size of DFA: 130 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.50u 0.08s 18.58t Elapsed: 00:00:00
Total cpu time: 18.50u 0.08s 18.58t Elapsed: 00:00:00
Start: Fri May 10 07:08:48 2013 End: Fri May 10 07:08:48 2013