BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030997
(167 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225432660|ref|XP_002282406.1| PREDICTED: uncharacterized protein LOC100259756 isoform 1 [Vitis
vinifera]
gi|297737050|emb|CBI26251.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/143 (81%), Positives = 128/143 (89%)
Query: 25 LTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 84
PLPV AED SNGQ++ E+GVVGAIKSLFDPNEK KSGKVLPKAYL SARE+VKTLRES
Sbjct: 67 FLPLPVWAEDESNGQEDDEKGVVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRES 126
Query: 85 LKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGP 144
LKEDPKDIA FRR AD+AKESIR+YLS+WRG++TV EESY LEKAIRSLASFYSKAGP
Sbjct: 127 LKEDPKDIAKFRRTADAAKESIREYLSSWRGKQTVVSEESYAMLEKAIRSLASFYSKAGP 186
Query: 145 SAPLPGEVKSEILNDLDTAEKFL 167
SA LP EVKSEIL+DL+TAE+FL
Sbjct: 187 SAALPEEVKSEILDDLNTAEEFL 209
>gi|255552187|ref|XP_002517138.1| conserved hypothetical protein [Ricinus communis]
gi|223543773|gb|EEF45301.1| conserved hypothetical protein [Ricinus communis]
Length = 204
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/142 (79%), Positives = 128/142 (90%), Gaps = 1/142 (0%)
Query: 26 TPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESL 85
TPLPV+AED SN Q+EK+ GV+G IKSLFDPNEKTKSGK+LPKAYLKSAR++VKTLR+SL
Sbjct: 64 TPLPVRAEDESNAQEEKD-GVIGTIKSLFDPNEKTKSGKLLPKAYLKSARDVVKTLRDSL 122
Query: 86 KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPS 145
KEDPKD+ FRR AD+AKESIR+YL +WRGQ+ V EESY+ELEKAIRSLASFYSKAGPS
Sbjct: 123 KEDPKDVTQFRRTADAAKESIREYLGSWRGQEKVVREESYIELEKAIRSLASFYSKAGPS 182
Query: 146 APLPGEVKSEILNDLDTAEKFL 167
APLP EVKSEILNDL AE+FL
Sbjct: 183 APLPEEVKSEILNDLSAAEEFL 204
>gi|147790522|emb|CAN69770.1| hypothetical protein VITISV_022066 [Vitis vinifera]
Length = 230
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 128/164 (78%), Gaps = 21/164 (12%)
Query: 25 LTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 84
PLPV AED SNGQ++ E+GVVGAIKSLFDPNEK KSGKVLPKAYL SARE+VKTLRES
Sbjct: 67 FLPLPVWAEDESNGQEDDEKGVVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRES 126
Query: 85 LKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE---------------------E 123
LKEDPKDIA FRR AD+AKESIR+YLS+WRG++TV E E
Sbjct: 127 LKEDPKDIAKFRRTADAAKESIREYLSSWRGKQTVVSEVCILQKHFWFLRWIPVVTVXHE 186
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
SY LEKAIRSLASFYSKAGPSA LP EVKSEIL+DL+TAE+FL
Sbjct: 187 SYAMLEKAIRSLASFYSKAGPSAALPEEVKSEILDDLNTAEEFL 230
>gi|359477522|ref|XP_003631991.1| PREDICTED: uncharacterized protein LOC100259756 isoform 2 [Vitis
vinifera]
Length = 235
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/169 (68%), Positives = 128/169 (75%), Gaps = 26/169 (15%)
Query: 25 LTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 84
PLPV AED SNGQ++ E+GVVGAIKSLFDPNEK KSGKVLPKAYL SARE+VKTLRES
Sbjct: 67 FLPLPVWAEDESNGQEDDEKGVVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRES 126
Query: 85 LKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTV------------------------- 119
LKEDPKDIA FRR AD+AKESIR+YLS+WRG++TV
Sbjct: 127 LKEDPKDIAKFRRTADAAKESIREYLSSWRGKQTVVSEYKGSLQLSSTAYHTRTEHFAER 186
Query: 120 -AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
EESY LEKAIRSLASFYSKAGPSA LP EVKSEIL+DL+TAE+FL
Sbjct: 187 LGNEESYAMLEKAIRSLASFYSKAGPSAALPEEVKSEILDDLNTAEEFL 235
>gi|224102063|ref|XP_002312530.1| predicted protein [Populus trichocarpa]
gi|118485936|gb|ABK94813.1| unknown [Populus trichocarpa]
gi|222852350|gb|EEE89897.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/143 (75%), Positives = 125/143 (87%), Gaps = 5/143 (3%)
Query: 25 LTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 84
LTPL +A+ ++EK++GV GAIKSLFDPNEKTKSGK+LPKAYLK+ARE+VK LRES
Sbjct: 67 LTPLQARAK-----EEEKDDGVAGAIKSLFDPNEKTKSGKLLPKAYLKAAREVVKNLRES 121
Query: 85 LKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGP 144
LKED KDIA FRR AD+AKESIR+YL +WRGQ+ V EESYVELEKAIRSLASFYS+AGP
Sbjct: 122 LKEDTKDIAKFRRTADAAKESIREYLGSWRGQEKVVREESYVELEKAIRSLASFYSRAGP 181
Query: 145 SAPLPGEVKSEILNDLDTAEKFL 167
SA LP EV+SEILNDL+TAE+FL
Sbjct: 182 SAQLPEEVRSEILNDLNTAEEFL 204
>gi|18390518|ref|NP_563737.1| LOW PSII accumulation 19 protein [Arabidopsis thaliana]
gi|8778732|gb|AAF79740.1|AC005106_21 T25N20.4 [Arabidopsis thaliana]
gi|13877959|gb|AAK44057.1|AF370242_1 unknown protein [Arabidopsis thaliana]
gi|23296694|gb|AAN13149.1| unknown protein [Arabidopsis thaliana]
gi|332189712|gb|AEE27833.1| LOW PSII accumulation 19 protein [Arabidopsis thaliana]
Length = 199
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/124 (83%), Positives = 115/124 (92%)
Query: 44 EGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAK 103
EGVVGA K+LFDPNE+TKSGK LPKAYLKSARE+VKT+RESLKE+PKD A FRR+AD+AK
Sbjct: 76 EGVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENPKDNAKFRRSADAAK 135
Query: 104 ESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 163
ESIRDYLSNWRGQKTVAGEESYVELE IR+LA FYSKAGPSAPLP EVK+EIL+DL+ A
Sbjct: 136 ESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLPDEVKTEILDDLNKA 195
Query: 164 EKFL 167
E+FL
Sbjct: 196 EEFL 199
>gi|297848810|ref|XP_002892286.1| hypothetical protein ARALYDRAFT_470540 [Arabidopsis lyrata subsp.
lyrata]
gi|297338128|gb|EFH68545.1| hypothetical protein ARALYDRAFT_470540 [Arabidopsis lyrata subsp.
lyrata]
Length = 199
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 117/127 (92%)
Query: 41 EKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNAD 100
E+ EGVVGA K+LFDPNE+TKSGK LPKAYLKSARE+VKT+RESLKE+PKD A FRR+AD
Sbjct: 73 EEGEGVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENPKDNAKFRRSAD 132
Query: 101 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 160
+AKESIRDYLSNWRGQKTVAGEESYVELE IR+LA FYSKAGPSAPLP EVK++IL+DL
Sbjct: 133 AAKESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLPDEVKTQILDDL 192
Query: 161 DTAEKFL 167
+ AE+FL
Sbjct: 193 NKAEEFL 199
>gi|26451618|dbj|BAC42906.1| unknown protein [Arabidopsis thaliana]
Length = 199
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/124 (82%), Positives = 115/124 (92%)
Query: 44 EGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAK 103
EGVVGA K+LFDPNE+TKSGK LPKAYLKSARE+VKT+RESLKE+P+D A FRR+AD+AK
Sbjct: 76 EGVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENPRDNAKFRRSADAAK 135
Query: 104 ESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 163
ESIRDYLSNWRGQKTVAGEESYVELE IR+LA FYSKAGPSAPLP EVK+EIL+DL+ A
Sbjct: 136 ESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLPDEVKTEILDDLNKA 195
Query: 164 EKFL 167
E+FL
Sbjct: 196 EEFL 199
>gi|388498828|gb|AFK37480.1| unknown [Lotus japonicus]
Length = 208
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 123/151 (81%)
Query: 17 LSRLSWQTLTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARE 76
L ++ L+PL AE+ S +++ ++GVVGAIKSLFDPNEK+KSGKVLPKAYLKSARE
Sbjct: 58 LVTMTCGGLSPLMASAEENSADKEDDDKGVVGAIKSLFDPNEKSKSGKVLPKAYLKSARE 117
Query: 77 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 136
+VKTLRESL E P D A FRR AD+AKESIRDYL WRG + VA EESY LEKAIRSLA
Sbjct: 118 VVKTLRESLNEVPDDNAKFRRTADAAKESIRDYLGGWRGNQDVAQEESYDMLEKAIRSLA 177
Query: 137 SFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
FYS+AGPSAPLP EVK+EIL+ L+TAE+FL
Sbjct: 178 KFYSRAGPSAPLPEEVKTEILDYLNTAEEFL 208
>gi|449444118|ref|XP_004139822.1| PREDICTED: uncharacterized protein LOC101211891 [Cucumis sativus]
gi|449492573|ref|XP_004159036.1| PREDICTED: uncharacterized LOC101211891 [Cucumis sativus]
Length = 206
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/143 (74%), Positives = 122/143 (85%)
Query: 25 LTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 84
LTP QAE+M N +E++ GV+G IKS+FDPNEKTKSGK+LPKAYLKSARE+VKTLRES
Sbjct: 64 LTPSSAQAEEMPNNMEEEDNGVIGTIKSIFDPNEKTKSGKILPKAYLKSAREVVKTLRES 123
Query: 85 LKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGP 144
L+EDPKD A FRR AD+AKESIRDYLSNW G++TV EESYV LEKAIRSLA FY+KAGP
Sbjct: 124 LQEDPKDGAKFRRTADAAKESIRDYLSNWLGKQTVVQEESYVVLEKAIRSLAGFYAKAGP 183
Query: 145 SAPLPGEVKSEILNDLDTAEKFL 167
SAPLP VKS+IL+DLD E+ L
Sbjct: 184 SAPLPEAVKSDILDDLDKVEESL 206
>gi|356526109|ref|XP_003531662.1| PREDICTED: uncharacterized protein LOC100805317 [Glycine max]
Length = 207
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 121/143 (84%)
Query: 25 LTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 84
L+P V AE+ S ++E+++GV+GAIKSLFDPNEKTKSGKVLPKAYL+SARE+VKTLRES
Sbjct: 65 LSPPTVWAEEKSGDKEEEDKGVIGAIKSLFDPNEKTKSGKVLPKAYLRSAREVVKTLRES 124
Query: 85 LKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGP 144
L E D A FRR ADSAKESIR+YL +WRG + VA EESYV LEK IRSLA++YSKAGP
Sbjct: 125 LNEGTDDNAKFRRTADSAKESIREYLGSWRGNQIVAQEESYVILEKVIRSLANYYSKAGP 184
Query: 145 SAPLPGEVKSEILNDLDTAEKFL 167
SAPL EVKSEIL+ L+TAE+FL
Sbjct: 185 SAPLSHEVKSEILDYLNTAEEFL 207
>gi|413933081|gb|AFW67632.1| hypothetical protein ZEAMMB73_336647 [Zea mays]
Length = 208
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 118/145 (81%), Gaps = 7/145 (4%)
Query: 26 TPLPVQA--EDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRE 83
P PV+A +D S+G EGV+GAIKS+FDPNE TK+GKVLPKAYLK+ARE+V+TLRE
Sbjct: 68 VPAPVRAAEDDGSSGG----EGVLGAIKSIFDPNETTKAGKVLPKAYLKAAREVVRTLRE 123
Query: 84 SLKEDPK-DIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKA 142
SL+ED D+A FRRNAD+AKESIR +L WRGQ+ VA EESYV LEKAIRSLA FYSKA
Sbjct: 124 SLEEDDGGDMARFRRNADAAKESIRAFLGGWRGQQAVADEESYVALEKAIRSLAEFYSKA 183
Query: 143 GPSAPLPGEVKSEILNDLDTAEKFL 167
GPSA LP +VK++IL+DL A+ +L
Sbjct: 184 GPSASLPQDVKNKILDDLSAADAYL 208
>gi|242032969|ref|XP_002463879.1| hypothetical protein SORBIDRAFT_01g008190 [Sorghum bicolor]
gi|241917733|gb|EER90877.1| hypothetical protein SORBIDRAFT_01g008190 [Sorghum bicolor]
Length = 205
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 46 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPK-DIANFRRNADSAKE 104
V+GAIKS+FDPNEKTK+GK LPKAYLK+ARE+V+TLRESL+ED D+A FRRNAD+AKE
Sbjct: 83 VLGAIKSIFDPNEKTKAGKTLPKAYLKAAREVVRTLRESLEEDDGGDMARFRRNADAAKE 142
Query: 105 SIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
SIR++L WRGQ+TVA EESYV LEKAIRSLA FYSKAGP APLP +VK++IL+DL A+
Sbjct: 143 SIREFLGGWRGQQTVAAEESYVALEKAIRSLAEFYSKAGPFAPLPQDVKNKILDDLSAAD 202
Query: 165 KFL 167
L
Sbjct: 203 ACL 205
>gi|326499962|dbj|BAJ90816.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 39 QDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED--PKDIANFR 96
+D K EGVVGA KSLFDPNE+TK+GKVLPKAYLK+ARE+V+TLRESL+E D A FR
Sbjct: 75 EDGKGEGVVGAFKSLFDPNEETKAGKVLPKAYLKAAREVVRTLRESLEEGDAAGDSARFR 134
Query: 97 RNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
R ADSAK SIR++L WRGQ VA EESYV LEKAI+SLA FYSKAGP A LPG+VKS+I
Sbjct: 135 RGADSAKTSIREFLGGWRGQPAVAKEESYVALEKAIKSLAEFYSKAGPFASLPGDVKSKI 194
Query: 157 LNDLDTAEKFL 167
L+DL+ AE +L
Sbjct: 195 LDDLNAAEAYL 205
>gi|326513898|dbj|BAJ92099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 39 QDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED--PKDIANFR 96
+D K EGVVGA KSLFDPNE+TK+GKVLPKAYLK+ARE+V+TLRESL+E D A FR
Sbjct: 100 EDGKGEGVVGAFKSLFDPNEETKAGKVLPKAYLKAAREVVRTLRESLEEGDAAGDSARFR 159
Query: 97 RNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
R ADSAK SIR++L WRGQ VA EESYV LEKAI+SLA FYSKAGP A LPG+VKS+I
Sbjct: 160 RGADSAKTSIREFLGGWRGQPAVAKEESYVALEKAIKSLAEFYSKAGPFASLPGDVKSKI 219
Query: 157 LNDLDTAEKFL 167
L+DL+ AE +L
Sbjct: 220 LDDLNAAEAYL 230
>gi|222625794|gb|EEE59926.1| hypothetical protein OsJ_12563 [Oryza sativa Japonica Group]
Length = 200
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 49 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 107
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 81 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 140
Query: 108 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 141 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 200
>gi|125545715|gb|EAY91854.1| hypothetical protein OsI_13500 [Oryza sativa Indica Group]
Length = 213
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 49 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 107
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 94 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 153
Query: 108 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 154 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 213
>gi|14626275|gb|AAK71543.1|AC087852_3 unknown protein [Oryza sativa Japonica Group]
Length = 213
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 49 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 107
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 94 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 153
Query: 108 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 154 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 213
>gi|115455321|ref|NP_001051261.1| Os03g0747700 [Oryza sativa Japonica Group]
gi|108711066|gb|ABF98861.1| expressed protein [Oryza sativa Japonica Group]
gi|113549732|dbj|BAF13175.1| Os03g0747700 [Oryza sativa Japonica Group]
gi|215765104|dbj|BAG86801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 212
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 49 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 107
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 93 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 152
Query: 108 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 153 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 212
>gi|357115294|ref|XP_003559425.1| PREDICTED: uncharacterized protein LOC100826702 [Brachypodium
distachyon]
Length = 204
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 102/121 (84%), Gaps = 2/121 (1%)
Query: 49 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLK-EDPK-DIANFRRNADSAKESI 106
AI SLFDPNE+TK GKVLPKAYLK+ARE+V+TLRESL+ ED D+A FRR ADSAK SI
Sbjct: 84 AITSLFDPNEETKGGKVLPKAYLKAAREVVRTLRESLEGEDAGGDVAKFRRGADSAKASI 143
Query: 107 RDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKF 166
R+++ WRGQ+ VA EESYV LE AI+SLA FYSKAGP A LPG+V+++IL+DL+TA+ +
Sbjct: 144 REFIGGWRGQQAVAKEESYVALESAIKSLAEFYSKAGPFASLPGDVRNKILDDLNTADAY 203
Query: 167 L 167
L
Sbjct: 204 L 204
>gi|116783894|gb|ABK23129.1| unknown [Picea sitchensis]
Length = 210
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 109/144 (75%), Gaps = 1/144 (0%)
Query: 25 LTPLPVQ-AEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRE 83
+ PL Q A E +EG++G + SLFDPNEKTKSG++LPK YLK+ARE+VK LRE
Sbjct: 67 MVPLSFQRAHAEEKASSENDEGLLGGLLSLFDPNEKTKSGRILPKIYLKNAREVVKNLRE 126
Query: 84 SLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAG 143
SLKED KD A FRR+ADSAKESI+D++ NW GQ++V E+SY L K IR LA FYSK G
Sbjct: 127 SLKEDSKDTAKFRRSADSAKESIKDFMRNWTGQQSVTSEDSYAALVKVIRVLADFYSKKG 186
Query: 144 PSAPLPGEVKSEILNDLDTAEKFL 167
P+A LP ++KS++++DL++AE L
Sbjct: 187 PTAALPEDIKSKVMDDLNSAEAAL 210
>gi|168048832|ref|XP_001776869.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671725|gb|EDQ58272.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
Query: 41 EKEEG--VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRN 98
+KEEG VV A+ LFDP++ TKSGK LPK Y+KS RE+VK LRES +D D A FRRN
Sbjct: 27 KKEEGGNVVDAVLELFDPDQLTKSGKKLPKKYVKSVREVVKNLRESFTQDSNDGAKFRRN 86
Query: 99 ADSAKESIRDYLSNWRGQKTVAGEESYVELE-KAIRSLASFYSKAGPSAPLPGEVKSEIL 157
ADSAKE+IR+YL NWRG K V E SY L +A L FYS GP APLP ++K+ +L
Sbjct: 87 ADSAKEAIREYLQNWRGSKVVETEASYFFLNARAFLELGKFYSSKGPQAPLPEDIKNRVL 146
Query: 158 NDLDTAE 164
DL+ A+
Sbjct: 147 EDLNKAD 153
>gi|302792975|ref|XP_002978253.1| hypothetical protein SELMODRAFT_37127 [Selaginella moellendorffii]
gi|300154274|gb|EFJ20910.1| hypothetical protein SELMODRAFT_37127 [Selaginella moellendorffii]
Length = 137
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Query: 42 KEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDP-KDIANFRRNAD 100
KEE ++ I S+FDPNE TKSGK LPK+YLK+AR++VK LRE+L++DP K+ FR A+
Sbjct: 11 KEESLLDGILSVFDPNETTKSGKKLPKSYLKAARDVVKNLREALQKDPAKEEQKFREAAN 70
Query: 101 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 160
+AK+SIR+YL+ W+ K V + SY LEKA+R L SFY K+GP+A +P ++KSEIL +L
Sbjct: 71 TAKDSIREYLTKWKNSKEVQEQSSYQVLEKALRQLGSFYLKSGPTAVMPDDIKSEILQNL 130
Query: 161 DTAE 164
AE
Sbjct: 131 SNAE 134
>gi|302765789|ref|XP_002966315.1| hypothetical protein SELMODRAFT_37126 [Selaginella moellendorffii]
gi|300165735|gb|EFJ32342.1| hypothetical protein SELMODRAFT_37126 [Selaginella moellendorffii]
Length = 137
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
Query: 42 KEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDP-KDIANFRRNAD 100
KEE ++ I S+FDPNE TKSGK LPK+YLK+AR++VK LRE+L++DP K+ FR A+
Sbjct: 11 KEESLLDGILSVFDPNETTKSGKKLPKSYLKAARDVVKNLREALQKDPAKEEQKFREAAN 70
Query: 101 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 160
+AK+SIR+YL+ W+ K V + SY L KA+R L SFY K+GP+A +P ++KSEIL +L
Sbjct: 71 TAKDSIREYLTKWKNSKEVQEQSSYQVLGKALRQLGSFYLKSGPTAVMPDDIKSEILQNL 130
Query: 161 DTAE 164
AE
Sbjct: 131 SNAE 134
>gi|356523010|ref|XP_003530135.1| PREDICTED: uncharacterized protein LOC100797323 [Glycine max]
Length = 167
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 82/98 (83%)
Query: 25 LTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 84
L+P V AE+ S ++E+++GV+GAIKSLFDPNEKTKSGKVLPKAYLKSARE+VKT+RES
Sbjct: 65 LSPSMVWAEEKSGEKEEEDKGVIGAIKSLFDPNEKTKSGKVLPKAYLKSAREVVKTMRES 124
Query: 85 LKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
L E D A FRR ADSAKESIR+YL +WRG +TVA E
Sbjct: 125 LNEVTDDNAKFRRTADSAKESIREYLGSWRGNQTVAQE 162
>gi|195636404|gb|ACG37670.1| hypothetical protein [Zea mays]
Length = 76
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 62/76 (81%)
Query: 92 IANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGE 151
+A FRRNAD+AKESIR +L WRGQ+ V EESYV LEKAIRSLA FYSKAGPSA LP +
Sbjct: 1 MARFRRNADAAKESIRAFLGGWRGQQAVTDEESYVALEKAIRSLAEFYSKAGPSASLPQD 60
Query: 152 VKSEILNDLDTAEKFL 167
VK++IL+DL A+ +L
Sbjct: 61 VKNKILDDLSAADAYL 76
>gi|326489223|dbj|BAK01595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 188
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 39 QDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKE 87
+D K EGVVGA KSLFDPNE+TK+GKVLPKAYLK+ARE+V+TLRESL+E
Sbjct: 71 EDGKGEGVVGAFKSLFDPNEETKAGKVLPKAYLKAAREVVRTLRESLEE 119
>gi|307110465|gb|EFN58701.1| hypothetical protein CHLNCDRAFT_140330 [Chlorella variabilis]
Length = 131
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 69 AYLKSARELVKTLRESLKEDPKDIA--NFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 126
AY +A+ LV LRE++ D D RR AD AK +R +L+ W+G V GEESY
Sbjct: 18 AYEDTAQRLVDALREAISTDLSDAEERQVRRAADPAKSLVRQFLTRWKGNGLVEGEESYR 77
Query: 127 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+L AI+ L +FY + G L GEV +L+ LD AE L
Sbjct: 78 QLSAAIQLLGTFYQQNGQRTRLTGEVGQAVLDRLDAAEAAL 118
>gi|384252190|gb|EIE25666.1| hypothetical protein COCSUDRAFT_52532 [Coccomyxa subellipsoidea
C-169]
Length = 214
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 64 KVLPKAYLKSARELVKTLRESLKEDPKDIA--NFRRNADSAKESIRDYLSNWRGQKTVAG 121
+ LP+ Y + A +L LRE+++ D D R+ AD AK ++ +LS W+ + V G
Sbjct: 97 RTLPQGYEEFAGKLAAALREAIETDLSDAEERQVRKKADPAKNLVKGWLSEWKDAQGVQG 156
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
E SY +L I+ L FY K G A LP + +E+L L AE L
Sbjct: 157 EASYTQLSGTIKELGEFYRKKGQRARLPRSLGNELLAKLAAAENAL 202
>gi|255083615|ref|XP_002508382.1| predicted protein [Micromonas sp. RCC299]
gi|226523659|gb|ACO69640.1| predicted protein [Micromonas sp. RCC299]
Length = 180
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 63 GKVLPKAYLKSARELVKTLRESLK---EDPKDIANFRRNADSAKESIRDYLSNWRGQKTV 119
G LP Y K AR+ VKTL SL+ +P D FR+ A+ AKE+++ ++ +W
Sbjct: 60 GLDLPDDYFKKARDAVKTLVASLEFEATNPSDADRFRK-AEPAKEAVKAFIKDWASAPAA 118
Query: 120 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
GE ++ ++ A+R L FY + G + L E + IL L A + L
Sbjct: 119 QGERAHDDIVLAVRELGEFYKENGSRSRLSPEARESILAKLYDAREAL 166
>gi|449438078|ref|XP_004136817.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Cucumis sativus]
gi|449493075|ref|XP_004159186.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Cucumis sativus]
Length = 169
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+K E++ +R ++ D D N +ES +++ +R +K + G S+ ++
Sbjct: 69 YVKDTNEVIGKVRTTITMDRND-PNVAAAVADLRESSNFWVAKYRKEKALLGRASFRDMY 127
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ +++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 128 SALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL 165
>gi|356543813|ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Glycine max]
Length = 173
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+K E++ +R ++ D D N +E+ +++ +R +K + G S+ ++
Sbjct: 73 YMKETEEVINKVRTTIVMDKND-PNVATAVAELRETSNSWVAKYRREKALLGRVSFRDMY 131
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 132 SALNAVSGHYISFGPTAPIPAKRRARILEEVDTAEKAL 169
>gi|224066547|ref|XP_002302130.1| predicted protein [Populus trichocarpa]
gi|222843856|gb|EEE81403.1| predicted protein [Populus trichocarpa]
Length = 176
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 70 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123
Y+K +++ +R ++ D D +AN R ++S +++ +R +K + G
Sbjct: 76 YVKDTEDVINKVRTTVNMDKNDPNVADAVANLRETSNS-------WVAKYRREKALLGRA 128
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ ++ A+ ++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 129 SFRDMYSALNAVTGHYVSFGPTAPIPSKRRARILEEMDTAEKAL 172
>gi|224082594|ref|XP_002306756.1| predicted protein [Populus trichocarpa]
gi|118489928|gb|ABK96761.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222856205|gb|EEE93752.1| predicted protein [Populus trichocarpa]
Length = 175
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+K E++ +R ++ D D N +E+ +++ +R +K + G S+ ++
Sbjct: 75 YVKDTEEVIGKVRTTMNMDKSD-PNVADAVAVLRETSNSWVAKYRREKALLGRASFRDIY 133
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 134 SALNAVTGHYISFGPTAPIPSKRKARILEEMDTAEKAL 171
>gi|255543290|ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
communis]
gi|223548669|gb|EEF50160.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
communis]
Length = 173
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+K E++ +R ++ + D N +E+ +++ +R +KT+ G S+ ++
Sbjct: 73 YVKETGEVIDKIRSTINMEKND-PNVATAVAELRETSNSWVAKYRREKTLLGRTSFRDIY 131
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ +++ Y GP+AP+P + K+ IL ++D+AEK L
Sbjct: 132 SALNAVSGHYISFGPTAPIPAKRKARILEEMDSAEKAL 169
>gi|356549934|ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Glycine max]
Length = 169
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+K E++ +R ++ D D N +E+ +++ +R +K + G S+ ++
Sbjct: 69 YVKETEEVINKVRTTIVMDKND-PNVATAVAELRETSNSWVAKYRREKALLGRASFRDIY 127
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 128 SALNAVSGHYISFGPTAPIPAKRRARILEEVDTAEKAL 165
>gi|257471708|pdb|2KMF|A Chain A, Solution Structure Of Psb27 From Cyanobacterial
Photosystem Ii
Length = 115
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 56 PNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRG 115
P SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R
Sbjct: 2 PLGSCDSGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRR 60
Query: 116 QKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+ G +S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+
Sbjct: 61 KGDAGGLKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAER 109
>gi|257097067|pdb|2KND|A Chain A, Psb27 Structure From Synechocystis
Length = 110
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 62 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 121
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 3 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 61
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+
Sbjct: 62 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAER 104
>gi|16331054|ref|NP_441782.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|383322796|ref|YP_005383649.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325965|ref|YP_005386818.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491849|ref|YP_005409525.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384437117|ref|YP_005651841.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|451815211|ref|YP_007451663.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|1653549|dbj|BAA18462.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|339274149|dbj|BAK50636.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|359272115|dbj|BAL29634.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359275285|dbj|BAL32803.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359278455|dbj|BAL35972.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407961579|dbj|BAM54819.1| photosystem II 11 kD protein [Bacillus subtilis BEST7613]
gi|451781180|gb|AGF52149.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
Length = 135
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 62 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 121
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 28 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 86
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+
Sbjct: 87 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAER 129
>gi|6919945|sp|P74367.2|PS11_SYNY3 RecName: Full=Photosystem II 11 kDa protein; Flags: Precursor
gi|1183848|dbj|BAA11640.1| 11 kDa protein of photosystem II [Synechocystis sp. PCC 6803]
Length = 134
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 62 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 121
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 27 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 85
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+
Sbjct: 86 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAER 128
>gi|308803258|ref|XP_003078942.1| unnamed protein product [Ostreococcus tauri]
gi|116057395|emb|CAL51822.1| unnamed protein product [Ostreococcus tauri]
Length = 226
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDI---ANFR-RNADSAKESIRDYLSNWRGQKTVAG 121
+P+ Y + AR++V LR SL+ + D+ A+ R + A+ AK++++ YLS + G
Sbjct: 106 VPERYARLARDVVDALRTSLEHEAVDVSASASERFKYAEPAKKAVKAYLS-YEGSADARE 164
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
SY ++ +A+R L++FY + G + PL E +++IL L A L
Sbjct: 165 SASYADIAEALRELSAFYKRNGATTPLTEETRTKILKLLTEASASL 210
>gi|159487195|ref|XP_001701619.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280838|gb|EDP06594.1| predicted protein [Chlamydomonas reinhardtii]
Length = 209
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDIAN------FRRNADSAKESIRDYLSNWRGQKTV 119
LPK Y R+LVK L E L E + A+ RR AD AKE +R+++ WR V
Sbjct: 92 LPKEY----RQLVKRLSEGLSESIETEASGASEAEVRRAADPAKEVVREFVRKWRDNPRV 147
Query: 120 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ + ++ E+++A+ L FY G L V+ +L L A L
Sbjct: 148 SSDITHAEIKEALAELGEFYLAYGQRTKLTPPVRESVLRHLKAARSAL 195
>gi|297739253|emb|CBI28904.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 70 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123
Y+K +++ +R ++ D D +A+ R ++S +++ +R +K + G
Sbjct: 103 YVKETADVINKVRTTINMDKTDPDVATAVADLRDASNS-------WVAKYRREKALLGRP 155
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ ++ A+ +++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 156 SFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL 199
>gi|225447221|ref|XP_002277789.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Vitis vinifera]
Length = 171
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 70 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123
Y+K +++ +R ++ D D +A+ R ++S +++ +R +K + G
Sbjct: 71 YVKETADVINKVRTTINMDKTDPDVATAVADLRDASNS-------WVAKYRREKALLGRP 123
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ ++ A+ +++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 124 SFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL 167
>gi|226491700|ref|NP_001147626.1| photosystem II 11 kD protein [Zea mays]
gi|194701306|gb|ACF84737.1| unknown [Zea mays]
gi|195612648|gb|ACG28154.1| photosystem II 11 kD protein [Zea mays]
gi|413955818|gb|AFW88467.1| photosystem II protein [Zea mays]
Length = 167
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESY 125
Y+ +E++ +R ++ D D + AD+ E +RD ++W R +K++ G S+
Sbjct: 67 YVSETKEVIGKVRSTIGLDKSDPSV----ADAVAE-LRDLSNSWVAKYRREKSLLGRPSF 121
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 122 REMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 163
>gi|223949701|gb|ACN28934.1| unknown [Zea mays]
gi|414866662|tpg|DAA45219.1| TPA: photosystem II protein [Zea mays]
Length = 170
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 70 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123
Y+ +E++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 70 YVSETKEVIGKVRSTINLDKSDPSVADAVAELRELSNS-------WVAKYRREKSLLGRP 122
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 123 SFREMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 166
>gi|226508326|ref|NP_001148428.1| photosystem II 11 kD protein [Zea mays]
gi|195619212|gb|ACG31436.1| photosystem II 11 kD protein [Zea mays]
Length = 170
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 70 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123
Y+ +E++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 70 YVSETKEVIGKVRSTINLDKSDPSVADAVAELRELSNS-------WVAKYRREKSLLGRP 122
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 123 SFREMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 166
>gi|242041037|ref|XP_002467913.1| hypothetical protein SORBIDRAFT_01g036240 [Sorghum bicolor]
gi|241921767|gb|EER94911.1| hypothetical protein SORBIDRAFT_01g036240 [Sorghum bicolor]
Length = 172
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 70 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123
Y+ +E++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 72 YVSETKEVIGKVRSTISLDKSDPSVADAVAELRELSNS-------WVAKYRREKSLLGRP 124
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 125 SFREMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 168
>gi|255639881|gb|ACU20233.1| unknown [Glycine max]
Length = 110
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 64 KVLPKAYLKSAR--ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 121
+VLPK + A E++ +R ++ D D N +E+ +++ +R +K + G
Sbjct: 2 QVLPKNNIVDAVTVEVINKVRTTIVMDKND-PNVATAVAELRETSNSWVAKYRREKALLG 60
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ ++ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 61 RVSFRDMYSALNAVSGHYISFGPTAPIPAKRRARILEEVDTAEKAL 106
>gi|302833718|ref|XP_002948422.1| hypothetical protein VOLCADRAFT_116830 [Volvox carteri f.
nagariensis]
gi|300266109|gb|EFJ50297.1| hypothetical protein VOLCADRAFT_116830 [Volvox carteri f.
nagariensis]
Length = 142
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 75 RELVKTLRESLKEDPK------DIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVEL 128
R+LVK L E L + + A RR AD AK+++R+++ WR V+G+ ++ E+
Sbjct: 26 RQLVKRLSEGLSDSIEAEASGASEAEVRRKADPAKDTVREFVRKWRDNPRVSGDITHAEV 85
Query: 129 EKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++A+ L FY G L V+ +L L A++ L
Sbjct: 86 KEALSELGEFYMAYGQRTKLTPPVRESVLKHLAAAKEAL 124
>gi|18379115|ref|NP_563687.1| photosystem II Psb27 protein [Arabidopsis thaliana]
gi|75180295|sp|Q9LR64.1|Y1360_ARATH RecName: Full=Thylakoid lumenal protein At1g03610, chloroplastic;
Flags: Precursor
gi|9280647|gb|AAF86516.1|AC002560_9 F21B7.21 [Arabidopsis thaliana]
gi|13899089|gb|AAK48966.1|AF370539_1 Unknown protein [Arabidopsis thaliana]
gi|14994277|gb|AAK73273.1| Unknown protein [Arabidopsis thaliana]
gi|21386971|gb|AAM47889.1| unknown protein [Arabidopsis thaliana]
gi|21536786|gb|AAM61118.1| unknown [Arabidopsis thaliana]
gi|332189467|gb|AEE27588.1| photosystem II Psb27 protein [Arabidopsis thaliana]
Length = 174
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 70 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 126
Y+K ++ +R +L K DP N +E+ +++ +R +K + G+ S+
Sbjct: 74 YIKDTSAVISKVRSTLSMQKTDP----NVADAVAELREASNSWVAKYRKEKALLGKASFR 129
Query: 127 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++ A+ +++ Y GP+AP+P + K+ IL +++TAEK L
Sbjct: 130 DIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKAL 170
>gi|297843164|ref|XP_002889463.1| photosystem II family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335305|gb|EFH65722.1| photosystem II family protein [Arabidopsis lyrata subsp. lyrata]
Length = 174
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 70 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 126
Y+K ++ +R +L K DP N +E+ +++ +R +K + G+ S+
Sbjct: 74 YIKDTSAVISKVRSTLSMQKTDP----NVADAVAELREASNSWVAKYRKEKALLGKASFR 129
Query: 127 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++ A+ +++ Y GP+AP+P + K+ IL +++TAEK L
Sbjct: 130 DIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKAL 170
>gi|116786137|gb|ABK23991.1| unknown [Picea sitchensis]
Length = 184
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESY 125
Y K +E++ ++ ++ D+ N +A ++R+ +NW R +K +AG+ S+
Sbjct: 84 YSKETKEVINQVKSTI-----DMEKSNPNTSAAVAALRETSNNWVAKYRREKQLAGKPSF 138
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ + +++ Y GP++P+P + K+ IL ++D AEK L
Sbjct: 139 SNMYSVLNAISGHYISFGPTSPIPAKRKARILEEMDVAEKAL 180
>gi|115452847|ref|NP_001050024.1| Os03g0333400 [Oryza sativa Japonica Group]
gi|108707991|gb|ABF95786.1| possible Photosystem II reaction center Psb27 protein, putative,
expressed [Oryza sativa Japonica Group]
gi|113548495|dbj|BAF11938.1| Os03g0333400 [Oryza sativa Japonica Group]
gi|125586152|gb|EAZ26816.1| hypothetical protein OsJ_10733 [Oryza sativa Japonica Group]
gi|218192770|gb|EEC75197.1| hypothetical protein OsI_11442 [Oryza sativa Indica Group]
Length = 165
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 70 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123
Y+ ++++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 65 YVSETKDVIGKVRSTINMDRADPGVADAVAELRELSNS-------WVAKYRREKSLLGRP 117
Query: 124 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 118 SFREMYSALNAVSGHYISFGPTAPIPNKRRARILEEMDTAEKAL 161
>gi|113953932|ref|YP_731225.1| photosystem II Psb27 protein [Synechococcus sp. CC9311]
gi|113881283|gb|ABI46241.1| possible photosystem II Psb27 protein [Synechococcus sp. CC9311]
Length = 140
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADS-AKESIRDYLSNWRGQKTVAGEESYVEL 128
Y++ + T+ ++L P+D AN RR AD A++ I DY+S +R + V G S+ +
Sbjct: 41 YVQDTVAVAHTIHDTLAL-PQDAAN-RREADGEARDLITDYVSRYRARPKVNGLSSFTTM 98
Query: 129 EKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+ A+ SLA Y+ + P+P +++ I +L AEK
Sbjct: 99 QTALNSLAGHYNNY-TNRPVPEALRARIDKELGKAEK 134
>gi|303287346|ref|XP_003062962.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455598|gb|EEH52901.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 130
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 66 LPKAYLKSARELVKTLRESLK---EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
LPK Y +AR + + L ESL+ +P + F+R A+ AKE+++ ++ +W G+
Sbjct: 13 LPKDYYAAARAVTRALTESLEFEASNPTNAERFKR-AEPAKEAVKTFIKDWASSPLARGD 71
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ ++ A++ L++FY G L E + +L L A + L
Sbjct: 72 RARDDIVLAVQELSAFYKANGSRVALSDETRRSVLEKLYDASEAL 116
>gi|357112354|ref|XP_003557974.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Brachypodium distachyon]
Length = 173
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESY 125
Y +E++ +R ++ D D + AD+ E +R+ ++W R +K++ G +S+
Sbjct: 73 YTSETKEVIGKVRSTISMDKADP----KVADAVTE-LRELSNSWVAKYRREKSLLGRQSF 127
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++ A+ +++ Y GP+AP+P + ++ IL ++D EK L
Sbjct: 128 RDMYSALNAVSGHYISFGPTAPIPNKRRTRILEEMDAVEKSL 169
>gi|388498200|gb|AFK37166.1| unknown [Medicago truncatula]
Length = 170
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESY 125
Y+K E++ +R ++ D D N +A +RD ++W R +K + S+
Sbjct: 70 YVKETEEVISKVRTTITLDKND-----PNVATAVVELRDTSNSWVAKYRREKALLARASF 124
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++ A+ +++ Y GP+AP+P + + IL +++ AEK L
Sbjct: 125 RDMYSALNAVSGHYISFGPTAPIPAKRRVRILEEIEVAEKSL 166
>gi|299471735|emb|CBN76956.1| photosystem II 11 kDa protein [Ectocarpus siliculosus]
Length = 206
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDP--KDIANFRRNADSAKESIRDYLSNWRGQKTVA 120
L K Y A ++V+ +R K DP DIAN + K+ + +++SN+R +
Sbjct: 102 LTKQYYPDASKMVRHMRYCTNMEKGDPYMADIAN------NCKKEMVEFVSNYRRSSNIN 155
Query: 121 GEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
G+ SY L +I LA Y+ GP P+P + + +L + E+
Sbjct: 156 GKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIER 200
>gi|428776922|ref|YP_007168709.1| photosystem II protein Psb27 [Halothece sp. PCC 7418]
gi|428691201|gb|AFZ44495.1| photosystem II protein Psb27 [Halothece sp. PCC 7418]
Length = 139
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 125
L Y + +++TLR +L E D N A+E + DY + +R + VAG S+
Sbjct: 34 LTGNYRQDTLTVLETLRTTL-EISVDDPNREEIRAKAREQLNDYAARYRRDEEVAGLRSF 92
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
++ A+ +LA++Y+ A + P+P VK + + E+ L
Sbjct: 93 TTMQTALNALANYYTSAYATRPIPQRVKDRVSQEFAQVERAL 134
>gi|352094747|ref|ZP_08955918.1| photosystem II protein Psb27 [Synechococcus sp. WH 8016]
gi|351681087|gb|EHA64219.1| photosystem II protein Psb27 [Synechococcus sp. WH 8016]
Length = 140
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y++ + T+ ++L P+D AN + A++ I DY+S +R + V G S+ ++
Sbjct: 41 YVQDTVAVAHTIHDTLAL-PQDAANRQEAEGEARDLITDYVSRYRARPKVNGLSSFTTMQ 99
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
A+ SLA Y+ + P+P +++ I +L AEK
Sbjct: 100 TALNSLAGHYNNY-TNRPVPDALRARIDKELGKAEK 134
>gi|145346186|ref|XP_001417574.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577801|gb|ABO95867.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 230
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDI----ANFRRNADSAKESIRDYLS--NWRGQKTV 119
+P+ Y + ARELV L SL+ + ++ + A AKE+++ Y+S G +
Sbjct: 109 VPRDYARVARELVDALSTSLEHEARNANKSPGERYKFAKPAKEAVKAYISYDGGGGSASA 168
Query: 120 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ SY ++ +A+R L++FY K G +A + EV+ IL+ L A L
Sbjct: 169 SSSASYADIAEALRELSAFYKKNGATAEMSAEVRDRILSRLYEARDLL 216
>gi|33866304|ref|NP_897863.1| photosystem II Psb27 protein [Synechococcus sp. WH 8102]
gi|33639279|emb|CAE08287.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 8102]
Length = 141
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y++ + LRE + + P+D AN A+ I DY+S +R Q V G S+ ++
Sbjct: 42 YVEDTIAVAHNLREVI-DLPQDAANRGEAESEARALINDYMSRYRPQPRVNGLSSFTTMQ 100
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
A+ SLA Y+ + PLP + I +L AEK
Sbjct: 101 TALNSLAGHYASYA-NRPLPEALHDRIAKELGKAEK 135
>gi|390440128|ref|ZP_10228480.1| Photosystem II 11 kDa protein [Microcystis sp. T1-4]
gi|389836494|emb|CCI32604.1| Photosystem II 11 kDa protein [Microcystis sp. T1-4]
Length = 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADS-AKESIRDYLSNWRGQKTVAG 121
L Y K +++TL +L K+DP A A+S AKE I DY+S +R K G
Sbjct: 39 LTGNYGKDTLTVIETLTTALDLVKDDPNKAA-----AESQAKEQINDYISLYRRDKKSGG 93
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 94 LRSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 127
>gi|326495336|dbj|BAJ85764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507340|dbj|BAJ95747.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516368|dbj|BAJ92339.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 70 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGE 122
Y+ E++ +R ++ K DPK AD+ E +R+ ++W R +K + G
Sbjct: 72 YVTETTEVIGKVRSTISMDKTDPK-------VADAVTE-LREMSNSWVAKYRREKALLGR 123
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+S+ ++ A+ +++ Y GP+AP+P + + IL ++D EK L
Sbjct: 124 QSFRDMYSALNAVSGHYISFGPTAPIPNKRRIRILEEMDAVEKSL 168
>gi|254525977|ref|ZP_05138029.1| photosystem II protein Psb27 [Prochlorococcus marinus str. MIT
9202]
gi|221537401|gb|EEE39854.1| photosystem II protein Psb27 [Prochlorococcus marinus str. MIT
9202]
Length = 145
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQTAV-DTPKDSPNKDEVRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|422303605|ref|ZP_16390956.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9806]
gi|389791361|emb|CCI12787.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9806]
Length = 133
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
L Y K +++TL +L K+DP A AKE I DY+S +R K G
Sbjct: 30 LTGNYGKDTLTVIETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 85
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 86 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 118
>gi|218247959|ref|YP_002373330.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8801]
gi|257060719|ref|YP_003138607.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8802]
gi|218168437|gb|ACK67174.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8801]
gi|256590885|gb|ACV01772.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8802]
Length = 135
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 125
L Y + +++TL +++ + P D A+ A+E I DY+S +R Q G S+
Sbjct: 32 LTGNYTQDTLAVIETLTKAI-DLPDDAADKTDVQTLAREQINDYISRYRRQSNSGGLRSF 90
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
++ A+ +LA +Y+ G S PLP ++K + +L A+
Sbjct: 91 TTMQTALNALAGYYTAYG-SRPLPEKLKKRLEQELKQAK 128
>gi|157412924|ref|YP_001483790.1| putative photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9215]
gi|157387499|gb|ABV50204.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9215]
Length = 145
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQTAV-DTPKDSPNKDEVRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|224108039|ref|XP_002314699.1| predicted protein [Populus trichocarpa]
gi|222863739|gb|EEF00870.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 39/100 (39%)
Query: 61 KSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVA 120
K+ V + +KSAR++VK LRESL+EDPKD+ L N
Sbjct: 7 KAKSVCGRKGIKSARDVVKNLRESLEEDPKDV-----------------LPNH------- 42
Query: 121 GEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 160
++ KAG S+PLP EVKSEILNDL
Sbjct: 43 --------------MSKTPPKAG-SSPLPEEVKSEILNDL 67
>gi|123968099|ref|YP_001008957.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. AS9601]
gi|123198209|gb|ABM69850.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. AS9601]
Length = 145
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQTAV-DTPKDSPNKDEVRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|428771198|ref|YP_007162988.1| photosystem II protein Psb27 [Cyanobacterium aponinum PCC 10605]
gi|428685477|gb|AFZ54944.1| photosystem II protein Psb27 [Cyanobacterium aponinum PCC 10605]
Length = 135
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 96 RRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSE 155
R N A++ I DY+S +R +G +S+ ++ A+ SLA +Y+ G + P+P ++K
Sbjct: 61 RENQTLARKQINDYVSRYRKNNKYSGLKSFTTMQTALNSLAGYYTSYG-NRPMPEKLKKR 119
Query: 156 ILNDLDTAE 164
+L + E
Sbjct: 120 LLQEFKQVE 128
>gi|172038546|ref|YP_001805047.1| photosystem II 11 kD protein [Cyanothece sp. ATCC 51142]
gi|354554113|ref|ZP_08973418.1| photosystem II protein Psb27 [Cyanothece sp. ATCC 51472]
gi|171700000|gb|ACB52981.1| photosystem II 11 kD protein [Cyanothece sp. ATCC 51142]
gi|353553792|gb|EHC23183.1| photosystem II protein Psb27 [Cyanothece sp. ATCC 51472]
Length = 134
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 125
L Y + ++++TL ++ + P D N ++ A+E I DY+S +R + G S+
Sbjct: 31 LSGNYSQDTLKVIETLTTAI-DLPNDADNKQQIQTLAREQINDYISRYRREDKSGGLRSF 89
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
++ A+ +LA +Y+ G S P+P ++K + + AE
Sbjct: 90 TTMQTALNALAGYYTSYG-SRPIPEKLKQRLKQEFKQAE 127
>gi|126659116|ref|ZP_01730256.1| photosystem II 11 kD protein [Cyanothece sp. CCY0110]
gi|126619644|gb|EAZ90373.1| photosystem II 11 kD protein [Cyanothece sp. CCY0110]
Length = 134
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 125
L Y + ++++TL ++ + P D N + A+E I DY+S +R + G S+
Sbjct: 31 LSGNYSQDTLKVIETLTTAI-DLPNDAENKQDIQTLAREQINDYISRYRREDQSGGLRSF 89
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
++ A+ SLA +Y+ G S P+P ++K + + AE
Sbjct: 90 TTMQTALNSLAGYYTSYG-SRPIPEKLKKRLKQEFKQAE 127
>gi|33861064|ref|NP_892625.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33639796|emb|CAE18966.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 145
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y K +VKTL+ ++ E PKD + + D + I DY+S +R + V +S+ ++
Sbjct: 46 YAKDTISVVKTLQIAV-ETPKDSPDKDKVRDESLALITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K + PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFATRPLPDKLKERLTKEFTLAEKMV 141
>gi|67920837|ref|ZP_00514356.1| photosystem II 11 kD protein [Crocosphaera watsonii WH 8501]
gi|416379910|ref|ZP_11683992.1| Photosystem II protein Psb27 [Crocosphaera watsonii WH 0003]
gi|67856954|gb|EAM52194.1| photosystem II 11 kD protein [Crocosphaera watsonii WH 8501]
gi|357265766|gb|EHJ14486.1| Photosystem II protein Psb27 [Crocosphaera watsonii WH 0003]
Length = 134
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 77 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 136
+++TL +L + P D N + AKE I DY+S +R G S+ ++ A+ SLA
Sbjct: 42 VIETLTTAL-DLPNDAENKQEIKSLAKEQINDYISRYRRNGESGGLRSFTTMQTALNSLA 100
Query: 137 SFYSKAGPSAPLPGEVKSEILNDLDTAE 164
+Y+ G + PLP ++K + + AE
Sbjct: 101 GYYTSYG-NRPLPEKLKKRLKQEFKQAE 127
>gi|425439813|ref|ZP_18820128.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9717]
gi|389719876|emb|CCH96353.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9717]
Length = 142
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 76 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 135
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 52 ETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 107
Query: 136 ASFYSKAGPSAPLPGEVKSEI 156
A +Y+ G S P+P ++K +
Sbjct: 108 AGYYTAYG-SRPIPDKLKQRL 127
>gi|443646822|ref|ZP_21129500.1| photosystem II protein Psb27 [Microcystis aeruginosa DIANCHI905]
gi|159028849|emb|CAO90654.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335651|gb|ELS50115.1| photosystem II protein Psb27 [Microcystis aeruginosa DIANCHI905]
Length = 133
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 76 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 135
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 43 ETLTTALDVVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 98
Query: 136 ASFYSKAGPSAPLPGEVKSEI 156
A +Y+ G S P+P ++K +
Sbjct: 99 AGYYTAYG-SRPVPDKLKQRL 118
>gi|126695872|ref|YP_001090758.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9301]
gi|126542915|gb|ABO17157.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9301]
Length = 145
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQSAV-DTPKDSPNKDEIRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLSKEFSLAEKMV 141
>gi|425450194|ref|ZP_18830026.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 7941]
gi|440751991|ref|ZP_20931194.1| photosystem II protein Psb27 [Microcystis aeruginosa TAIHU98]
gi|389769050|emb|CCI05978.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 7941]
gi|440176484|gb|ELP55757.1| photosystem II protein Psb27 [Microcystis aeruginosa TAIHU98]
Length = 133
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 76 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 135
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 43 ETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 98
Query: 136 ASFYSKAGPSAPLPGEVKSEI 156
A +Y+ G S P+P ++K +
Sbjct: 99 AGYYTAYG-SRPIPDKLKQRL 118
>gi|425434477|ref|ZP_18814946.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9432]
gi|425460156|ref|ZP_18839638.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9808]
gi|389676021|emb|CCH94893.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9432]
gi|389827151|emb|CCI21726.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9808]
Length = 142
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
L Y + +++TL +L K+DP A AKE I DY+S +R K G
Sbjct: 39 LTGNYGQDTLTVIETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 94
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 95 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 127
>gi|123965806|ref|YP_001010887.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9515]
gi|123200172|gb|ABM71780.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9515]
Length = 145
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +VKTL+ ++ + PKD N D + I DY+S +R + V +S+ ++
Sbjct: 46 YTQDTISVVKTLQIAV-DTPKDSPNKNEVRDESLALITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K + PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFATRPLPDKLKERLTKEFSLAEKMV 141
>gi|326512754|dbj|BAK03284.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Query: 76 ELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESYVEL 128
E++ +R ++ K DPK AD+ E +R+ ++W R +K + G +S+ ++
Sbjct: 78 EVIGKVRSTISMDKTDPK-------VADAVTE-LREMSNSWVAKYRREKALLGRQSFRDM 129
Query: 129 EKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ +++ Y GP+AP+P + + IL ++D EK L
Sbjct: 130 YSALNAVSGHYISFGPTAPIPNKRRIRILEEMDAVEKSL 168
>gi|218438286|ref|YP_002376615.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7424]
gi|218171014|gb|ACK69747.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7424]
Length = 133
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 125
L Y + +++ TL ++ + PKD N AK+ I DY+S +R G S+
Sbjct: 30 LTGNYSQDTLKVINTLSAAI-DLPKDAPNQSEIQSQAKDEINDYISRYRRDSKSGGLRSF 88
Query: 126 VELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
++ A+ +LA +Y+ G S PLP ++K+ +
Sbjct: 89 TTMQTALNALAGYYTTYG-SRPLPEKLKNRL 118
>gi|425465433|ref|ZP_18844742.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9809]
gi|389832332|emb|CCI24144.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9809]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
L Y K ++++L +L K+DP A AKE I DY+S +R K G
Sbjct: 39 LTGNYGKDTLTVIESLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 94
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 95 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 127
>gi|166365090|ref|YP_001657363.1| photosystem II 11 kDa protein [Microcystis aeruginosa NIES-843]
gi|166087463|dbj|BAG02171.1| photosystem II 11 kDa protein [Microcystis aeruginosa NIES-843]
Length = 133
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
L Y K ++++L +L K+DP A AKE I DY+S +R K G
Sbjct: 30 LTGNYGKDTLTVIESLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 85
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 86 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 118
>gi|425469688|ref|ZP_18848603.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9701]
gi|389880427|emb|CCI38808.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9701]
Length = 142
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 76 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 135
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 52 ESLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 107
Query: 136 ASFYSKAGPSAPLPGEVKSEI 156
A +Y+ G S P+P ++K +
Sbjct: 108 AGYYTAYG-SRPIPDKLKQRL 127
>gi|428780501|ref|YP_007172287.1| photosystem II protein Psb27 [Dactylococcopsis salina PCC 8305]
gi|428694780|gb|AFZ50930.1| photosystem II protein Psb27 [Dactylococcopsis salina PCC 8305]
Length = 134
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 40/68 (58%)
Query: 100 DSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILND 159
+ A++ + +Y + +R + VAG S+ ++ A+ +LA++Y+ A + P+P +VK + +
Sbjct: 62 EKARKQLNEYAARYRRDEQVAGLRSFTTMQTALNALANYYTSAYATRPIPDKVKDRVSQE 121
Query: 160 LDTAEKFL 167
E+ L
Sbjct: 122 FAQVERAL 129
>gi|78778893|ref|YP_397005.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9312]
gi|78712392|gb|ABB49569.1| photosystem II reaction center Psb27 protein-like protein
[Prochlorococcus marinus str. MIT 9312]
Length = 145
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y K +VKTL+ ++ + PKD N + I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQIAV-DTPKDSPNKDEVRSESLTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|425448219|ref|ZP_18828198.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9443]
gi|425456966|ref|ZP_18836672.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9807]
gi|389731056|emb|CCI04849.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9443]
gi|389801825|emb|CCI19075.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9807]
Length = 142
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
L Y + +++TL +L K+DP A AKE I DY+S +R K G
Sbjct: 39 LTGNYGQDTLTVIETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 94
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
S+ ++ A+ S+A +Y+ G S P+P ++K +
Sbjct: 95 RSFTTMQTALNSVAGYYTAYG-SRPIPDKLKQRL 127
>gi|170079127|ref|YP_001735765.1| photosystem II 11 kD protein [Synechococcus sp. PCC 7002]
gi|169886796|gb|ACB00510.1| photosystem II 11 kD protein [Synechococcus sp. PCC 7002]
Length = 137
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+ +V+ L E++ + P D N +A+ + +Y+S +R +G S+ ++
Sbjct: 38 YVDDTLLVVENLTEAI-QLPADAPNRSEVQAAARLQMNEYMSRYRRDPKTSGLRSFTTMQ 96
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 163
A+ +LA +YS G S PLP ++K+ + + +TA
Sbjct: 97 TALNALAGYYSSFG-SRPLPEKLKTRLATEFETA 129
>gi|307151847|ref|YP_003887231.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7822]
gi|306982075|gb|ADN13956.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7822]
Length = 134
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +L+ TL ++ E PK+ N A++ I DY+S +R + G S+ ++
Sbjct: 35 YTQDTLKLIDTL-SAVIELPKEAENKAEIQSQARDEINDYISRYRRDQNSGGLRSFTTMQ 93
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEI 156
A+ ++A +Y+ G + PLP ++K+ +
Sbjct: 94 TALNAIAGYYTSYG-TRPLPEKLKNRL 119
>gi|159903049|ref|YP_001550393.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9211]
gi|159888225|gb|ABX08439.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9211]
Length = 144
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
+++ + +TL+E++ P D N D A E I Y+S +R + G S+ ++
Sbjct: 45 FVEDTVSVAQTLKETIA-IPDDSENRSEAKDEALELITQYISRYRNRPQFNGTNSFTTMQ 103
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ ++A Y K + PLP ++K + +L AEK +
Sbjct: 104 TALNAMAGHY-KTFANRPLPEKLKERLKKELSRAEKIV 140
>gi|443477525|ref|ZP_21067366.1| hypothetical protein Pse7429DRAFT_3149 [Pseudanabaena biceps PCC
7429]
gi|443017340|gb|ELS31805.1| hypothetical protein Pse7429DRAFT_3149 [Pseudanabaena biceps PCC
7429]
Length = 172
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y+ + +KTLRE++ P++ N +A+ I Y+S +R G SY +
Sbjct: 73 YIADTTDTIKTLREAINL-PENAENRAAVKTAARYKINAYVSRYRADHDKGGLYSYTTMS 131
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ +LA +Y+ + A +P + + +L + D AE L
Sbjct: 132 TALNTLAGYYNGSMKRA-VPAKTRDRLLQEFDRAETAL 168
>gi|307103708|gb|EFN51966.1| hypothetical protein CHLNCDRAFT_59045 [Chlorella variabilis]
Length = 176
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 100 DSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILND 159
+S ++ I D+++ +R +G SY A+ ++A + G +AP+P + ++ +
Sbjct: 105 ESVRKEINDWVARYRRDTAFSGRPSYGNTYSAVNAMAGHLNSFGATAPIPKKRLERLVKE 164
Query: 160 LDTAEKFL 167
LD AE+FL
Sbjct: 165 LDDAERFL 172
>gi|302756747|ref|XP_002961797.1| hypothetical protein SELMODRAFT_77713 [Selaginella moellendorffii]
gi|302762899|ref|XP_002964871.1| hypothetical protein SELMODRAFT_83711 [Selaginella moellendorffii]
gi|300167104|gb|EFJ33709.1| hypothetical protein SELMODRAFT_83711 [Selaginella moellendorffii]
gi|300170456|gb|EFJ37057.1| hypothetical protein SELMODRAFT_77713 [Selaginella moellendorffii]
Length = 147
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 89 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148
P +A+ R++++S +++ +R +K+VAG+ S+ + + +++ Y GPS+ +
Sbjct: 72 PNAVASLRQSSNS-------WVAKYRREKSVAGKPSFSNMYSVLNAISGHYISFGPSSTI 124
Query: 149 PGEVKSEILNDLDTAEKFL 167
P + + IL ++ AEK L
Sbjct: 125 PAKRQQRILEEVKDAEKAL 143
>gi|260435978|ref|ZP_05789948.1| photosystem II protein Psb27 [Synechococcus sp. WH 8109]
gi|260413852|gb|EEX07148.1| photosystem II protein Psb27 [Synechococcus sp. WH 8109]
Length = 147
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PLP + I +L+
Sbjct: 79 ARALINDYMSRYRPQPRVNGLSSFTTMQTALNSLAGHYASYA-NRPLPEALHDRIAKELN 137
Query: 162 TAEK 165
AEK
Sbjct: 138 KAEK 141
>gi|168036851|ref|XP_001770919.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677783|gb|EDQ64249.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 104
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 70 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 126
Y ++++ +R +L K DP A + ++S ++++ +R K VAG+ S+
Sbjct: 4 YKSETQDMIGQVRSTLAMEKTDPNKAAAVAK----LRQSGNEWVAKYRKAKKVAGKPSFS 59
Query: 127 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ I +++ Y G + P+P + K IL+++ AEK L
Sbjct: 60 NMYSVINAISGHYVSFGATYPIPAKRKDRILDEVKDAEKAL 100
>gi|298489765|ref|YP_003719942.1| photosystem II protein Psb27 ['Nostoc azollae' 0708]
gi|298231683|gb|ADI62819.1| photosystem II protein Psb27 ['Nostoc azollae' 0708]
Length = 134
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +V TLR++++ P+D A+ A++ I D+ + ++ +V+G S+ +
Sbjct: 35 YRQDTLAVVNTLRQAIEVSPEDPNKAALQAE-ARQKINDFSARYQRVNSVSGLNSFTTMR 93
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
A+ SLA YS + P+ P+P ++K+ + + D E
Sbjct: 94 TALNSLAGHYS-SYPNRPIPEKLKNRLELEFDRVE 127
>gi|78212242|ref|YP_381021.1| photosystem II Psb27 protein [Synechococcus sp. CC9605]
gi|78196701|gb|ABB34466.1| possible photosystem II Psb27 protein [Synechococcus sp. CC9605]
Length = 141
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PLP + I +L+
Sbjct: 73 ARALINDYMSRYRPQPRVNGLSSFTTMQTALNSLAGHYASYA-NRPLPEALHDRIAKELN 131
Query: 162 TAEK 165
AEK
Sbjct: 132 KAEK 135
>gi|332705970|ref|ZP_08426043.1| photosystem II protein Psb27 [Moorea producens 3L]
gi|332355230|gb|EGJ34697.1| photosystem II protein Psb27 [Moorea producens 3L]
Length = 134
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 62 SGKVLPKAYLKSARELVKTLRESLK--EDPKDIANFRRNADSAKESIRDYLSNWRGQKTV 119
SG L Y + ++ LR++L+ ED D R + A + DY S +R ++V
Sbjct: 27 SGTGLTGDYRQDTITALQELRQALELPEDSPDKTAIR---EKATLLMNDYASRYRRDRSV 83
Query: 120 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ S+ + A+ SLA +YS + P+ PLP +VK + + E+ L
Sbjct: 84 STLNSFTTMRTAVNSLAGYYS-SYPNRPLPKKVKDRLEQEFSQVERSL 130
>gi|412988356|emb|CCO17692.1| predicted protein [Bathycoccus prasinos]
Length = 235
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 66 LPKAY---LKSARELVKTLRESLKEDPKDIANFR-RNADSAKESIRDYLSNWRGQKTVAG 121
+PK Y L+SA EL+ E + P + R AD AK+++++Y+ W+G+
Sbjct: 106 VPKEYAEKLRSACELLLKSIEYERAHPSASVSERFAAADPAKQAVKEYIQTWQGRPETRD 165
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEIL 157
E+ V + +R LA +Y K G L E++ +++
Sbjct: 166 LETSVITGEVLRELARYYKKNGSQVALDAELRDDVV 201
>gi|449017142|dbj|BAM80544.1| photosystem II protein Psb27 [Cyanidioschyzon merolae strain 10D]
Length = 196
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 63 GKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
G L Y + A ++V+++R + + + + D+ ++ + D+++ +R VAG
Sbjct: 89 GYELHGDYHEDATQVVQSMRTVTRLE-RGTPGMKEKVDATRKQMNDFVALYRRNPNVAGA 147
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
S+ L AI +LA ++ G + P+P + K + L+ E+ L
Sbjct: 148 VSFSTLYTAINTLAGHFASYGSTYPVPEKRKKRLEQQLNDVERAL 192
>gi|428221289|ref|YP_007105459.1| hypothetical protein Syn7502_01221 [Synechococcus sp. PCC 7502]
gi|427994629|gb|AFY73324.1| hypothetical protein Syn7502_01221 [Synechococcus sp. PCC 7502]
Length = 160
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 58 EKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQK 117
EK +G + Y++ + +VK+LR ++ DPKD D A+ I Y S +R
Sbjct: 51 EKANAG--MTGNYVEDTKAVVKSLRYAVGLDPKDPNKIAAQTD-ARYKINAYASRYRRDS 107
Query: 118 TVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
G S+ L A+ +LAS+Y+ + +P +V+ ++ +LD
Sbjct: 108 EKLGLTSFTTLRTALNALASYYNGTTKRS-VPPKVRDRVILELD 150
>gi|116075298|ref|ZP_01472558.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9916]
gi|116067495|gb|EAU73249.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9916]
Length = 141
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSA-KESIRDYLSNWRGQKTVAGEESYVEL 128
Y++ +V TL+ ++ D R A++A + I DY+S +R + V G S+ +
Sbjct: 42 YVEDTVAVVHTLQSTIAMGQDD--EGRAEAETAATDLINDYMSRYRPRPQVNGLSSFTTM 99
Query: 129 EKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+ A+ SLA Y K + PLP +++ + +L AEK
Sbjct: 100 QTALNSLAGHY-KTYANRPLPDTLRARVDKELGKAEK 135
>gi|254414522|ref|ZP_05028288.1| photosystem II protein Psb27 [Coleofasciculus chthonoplastes PCC
7420]
gi|196178752|gb|EDX73750.1| photosystem II protein Psb27 [Coleofasciculus chthonoplastes PCC
7420]
Length = 132
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A++SI +Y+S +R +VA S+ + A+ SLA +YS + P+ PLP ++K + +
Sbjct: 64 ARQSINEYISRYRRDGSVANLSSFSTMRTALNSLAGYYS-SYPNRPLPQKLKERLEQEFR 122
Query: 162 TAEK 165
E+
Sbjct: 123 QVER 126
>gi|194477322|ref|YP_002049501.1| possible Photosystem II Psb27 protein [Paulinella chromatophora]
gi|171192329|gb|ACB43291.1| possible Photosystem II Psb27 protein [Paulinella chromatophora]
Length = 138
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADS-AKESIRDYLSNWRGQKTVAGEES 124
L Y+ + +TL ++ D+A R A++ ++ I DY++ +R Q V G S
Sbjct: 35 LTGVYIDDTITVSQTLLNTITLAQDDMA--RSQAETESRALINDYMARYRPQSQVNGLSS 92
Query: 125 YVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 163
+ ++ A+ SLA Y+ + PLP E+K + +L A
Sbjct: 93 FTTMQTAVNSLAGHYASYA-NRPLPEELKERLTKELKKA 130
>gi|88807668|ref|ZP_01123180.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 7805]
gi|88788882|gb|EAR20037.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 7805]
Length = 141
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 65 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEES 124
+L Y++ +V L+ +L P D + + A + I DY+S +R + V G S
Sbjct: 37 LLSGDYVEDTVAVVHMLQNTLAL-PSDSEGLQDSEHEAHDLINDYMSRYRPRPQVNGLSS 95
Query: 125 YVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+ ++ A+ SL Y+ + P+P +K+ + +L AEK
Sbjct: 96 FTTMQTALNSLQGHYNTY-TNRPVPDALKTRVEKELSKAEK 135
>gi|318041156|ref|ZP_07973112.1| putative photosystem II reaction center Psb27 protein
[Synechococcus sp. CB0101]
Length = 135
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 101 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 160
SA+ I DY++ +R Q V G S+ ++ A+ SLA Y+ P+ P+P ++ + +L
Sbjct: 66 SARALINDYMARYRPQPKVNGLASFTTMQTALNSLAGHYANY-PNRPVPDALRDRVSKEL 124
Query: 161 DTAE 164
AE
Sbjct: 125 KKAE 128
>gi|148238957|ref|YP_001224344.1| photosystem II protein Psb27 [Synechococcus sp. WH 7803]
gi|147847496|emb|CAK23047.1| Photosystem II protein Psb27 [Synechococcus sp. WH 7803]
Length = 141
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 65 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEES 124
+L Y++ +V L+ +L P D + + + A + I DY+S +R + V G S
Sbjct: 37 LLSGDYVEDTVAVVHMLQNTLAL-PADAESLQDSEHEAHDLINDYMSRYRPRPQVNGLSS 95
Query: 125 YVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
+ ++ A+ SL Y+ + P+P +K+ + +L AEK
Sbjct: 96 FTTMQTALNSLQGHYNTY-TNRPVPEALKTRVEKELSKAEK 135
>gi|116072889|ref|ZP_01470154.1| possible photosystem II Psb27 protein [Synechococcus sp. BL107]
gi|116064415|gb|EAU70176.1| possible photosystem II Psb27 protein [Synechococcus sp. BL107]
Length = 141
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 89 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148
P+D + + + A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PL
Sbjct: 60 PQDDPSHAQAENDARSLITDYVSRYRPQPRVNGLSSFTTMQTALNSLAGHYANYA-NRPL 118
Query: 149 PGEVKSEILNDLDTAEK 165
P + + +L A+K
Sbjct: 119 PEALHDRLAKELTKAQK 135
>gi|78185233|ref|YP_377668.1| photosystem II Psb27 protein [Synechococcus sp. CC9902]
gi|78169527|gb|ABB26624.1| possible photosystem II Psb27 protein [Synechococcus sp. CC9902]
Length = 141
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 89 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148
P+D + + A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PL
Sbjct: 60 PQDDPSHAQAESDARSLITDYVSRYRPQPRVNGLSSFTTMQTALNSLAGHYANYA-NRPL 118
Query: 149 PGEVKSEILNDLDTAEK 165
P + + +L+ A+K
Sbjct: 119 PEALHDRLAKELNKAQK 135
>gi|434396698|ref|YP_007130702.1| photosystem II protein Psb27 [Stanieria cyanosphaera PCC 7437]
gi|428267795|gb|AFZ33736.1| photosystem II protein Psb27 [Stanieria cyanosphaera PCC 7437]
Length = 134
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A++ I DY S +R AG S+ ++ A+ +LA +YS G PLP ++K + +
Sbjct: 66 ARQQISDYASRYRRDAKTAGLRSFTTMQTALNALAGYYSSYGIR-PLPDKLKQRLQQEFK 124
Query: 162 TAE 164
E
Sbjct: 125 QVE 127
>gi|428772403|ref|YP_007164191.1| photosystem II protein Psb27 [Cyanobacterium stanieri PCC 7202]
gi|428686682|gb|AFZ46542.1| photosystem II protein Psb27 [Cyanobacterium stanieri PCC 7202]
Length = 134
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 100 DSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILND 159
D ++ I DY+S +R G +S+ ++ A+ SLA +Y+ G + P+P ++K + +
Sbjct: 64 DETRKQINDYISRYRKNSNYGGLKSFTTMQTALNSLAGYYTSYG-NRPIPEKLKKRLNQE 122
Query: 160 LDTAE 164
E
Sbjct: 123 FKQVE 127
>gi|75906801|ref|YP_321097.1| photosystem II 11 kD protein [Anabaena variabilis ATCC 29413]
gi|75700526|gb|ABA20202.1| photosystem II 11 kD protein [Anabaena variabilis ATCC 29413]
Length = 159
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 70 YLKSARELVKTLRESLK--EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVE 127
Y + +V TLR++L+ ED D A + A++ I D+ + ++ +V+G S+
Sbjct: 60 YRQDTLAVVNTLRQALEITEDSPDKAALQ---AEARQKINDFSARYQRVNSVSGLNSFTT 116
Query: 128 LEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ A+ SLA YS + P+ P+P ++KS + + E L
Sbjct: 117 MRTALNSLAGHYS-SYPNRPVPQKLKSRLEQEFKQVESAL 155
>gi|428202648|ref|YP_007081237.1| photosystem II protein Psb27 [Pleurocapsa sp. PCC 7327]
gi|427980080|gb|AFY77680.1| photosystem II protein Psb27 [Pleurocapsa sp. PCC 7327]
Length = 134
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A++ I DY++ +R + G S+ ++ A+ SLA +Y+ G + PLP ++KS + + +
Sbjct: 66 ARKQINDYIARYRRKDKSDGLRSFTTMQTALNSLAGYYTAYG-NRPLPEKLKSRLKQEFN 124
Query: 162 TAE 164
A+
Sbjct: 125 QAK 127
>gi|254431371|ref|ZP_05045074.1| photosystem II protein Psb27 [Cyanobium sp. PCC 7001]
gi|197625824|gb|EDY38383.1| photosystem II protein Psb27 [Cyanobium sp. PCC 7001]
Length = 143
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A+ I DY++ +R + V G S+ ++ A+ SLA Y+ P+ P+P ++ + +L
Sbjct: 75 ARGLINDYMARYRPRTAVHGLASFTTMQTALNSLAGHYANY-PNRPVPEALRDRVTKELQ 133
Query: 162 TAEK 165
AE+
Sbjct: 134 KAER 137
>gi|428309367|ref|YP_007120344.1| photosystem II protein Psb27 [Microcoleus sp. PCC 7113]
gi|428250979|gb|AFZ16938.1| photosystem II protein Psb27 [Microcoleus sp. PCC 7113]
Length = 136
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + L++ LR ++ E P+ + +A++SI ++ S +R +VA S+ +
Sbjct: 37 YRQDTLTLLQNLRTAI-ELPEGTPDKAEAQSNARQSINEFASRYRRDSSVANLSSFTTMR 95
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ SLA YS + P+ PLP ++K+ + + E L
Sbjct: 96 TALNSLAGHYS-SYPNRPLPQKLKNRLEQEFRQVESAL 132
>gi|323450849|gb|EGB06728.1| hypothetical protein AURANDRAFT_7494, partial [Aureococcus
anophagefferens]
Length = 102
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y A+++V +R + D K + + A + K+ + D+++ +R V+G++S+ L
Sbjct: 2 YYTDAQKVVAHMRLATSLD-KGAPDMEKIALNTKKEMIDFVAFYRRFTNVSGKQSFSTLY 60
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
AI LA Y+ GP P+P + + + + EK
Sbjct: 61 TAINVLAGHYTSYGPKFPVPEKRRKRLYQEYAEIEK 96
>gi|17228753|ref|NP_485301.1| photosystem II 11 kD protein [Nostoc sp. PCC 7120]
gi|17130605|dbj|BAB73215.1| photosystem II 11 kD protein [Nostoc sp. PCC 7120]
Length = 133
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 70 YLKSARELVKTLRESLK--EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVE 127
Y + +V TLR++L+ ED D + A++ I D+ + ++ +V+G S+
Sbjct: 34 YRQDTLAVVNTLRQALEITEDSPDKTALQ---AEARQKINDFSARYQRVNSVSGLNSFTT 90
Query: 128 LEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ A+ SLA YS + P+ P+P ++KS + + E L
Sbjct: 91 MRTALNSLAGHYS-SYPNRPVPQKLKSRLEQEFKQVESAL 129
>gi|255081690|ref|XP_002508067.1| predicted protein [Micromonas sp. RCC299]
gi|226523343|gb|ACO69325.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 108 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
D+++ +R K + G SY + A+ +++ Y+ G PLP + K +L + +TAE
Sbjct: 120 DWVARYRRDKGITGRPSYGNVYSALNAVSGHYNNFGTKYPLPQKRKDRVLQEFETAE 176
>gi|317969640|ref|ZP_07971030.1| putative photosystem II reaction center Psb27 protein
[Synechococcus sp. CB0205]
Length = 136
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 101 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 160
SA+ I DY++ +R Q G S+ ++ A+ SLA Y+ P+ P+P +K + +L
Sbjct: 67 SARALINDYMARYRPQAKFNGLASFTTMQTALNSLAGHYANY-PNRPVPDALKERLNKEL 125
Query: 161 DTAE 164
AE
Sbjct: 126 KKAE 129
>gi|428207653|ref|YP_007092006.1| photosystem II protein Psb27 [Chroococcidiopsis thermalis PCC 7203]
gi|428009574|gb|AFY88137.1| photosystem II protein Psb27 [Chroococcidiopsis thermalis PCC 7203]
Length = 151
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +++ LR ++ E P+D N A++ I D+ + ++ ++ G S+ +
Sbjct: 52 YRQDTLDVIGVLRNAI-ELPQDAPNKGEIQAEARKKINDFAARYQRNGSLTGLSSFTTMR 110
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEI 156
A+ SLA YS P+ PLP ++K +
Sbjct: 111 TALNSLAGHYSSY-PNRPLPAKLKQRL 136
>gi|427734755|ref|YP_007054299.1| photosystem II protein Psb27 [Rivularia sp. PCC 7116]
gi|427369796|gb|AFY53752.1| photosystem II protein Psb27 [Rivularia sp. PCC 7116]
Length = 145
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +V LRE+L P D A+ A++ I ++ + ++ +V+G S+ +
Sbjct: 46 YRQDTLNIVNVLREALAS-PDDAADKAAVQAEARKKINEFAARYQRNTSVSGLSSFTTMR 104
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ SLA YS + P+ P+P ++K+ + + E L
Sbjct: 105 TALNSLAGHYS-SYPNRPVPEKLKNRLEKEFKQVEAAL 141
>gi|308501939|ref|XP_003113154.1| hypothetical protein CRE_25529 [Caenorhabditis remanei]
gi|308265455|gb|EFP09408.1| hypothetical protein CRE_25529 [Caenorhabditis remanei]
Length = 1375
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 58 EKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW-RGQ 116
E T + PK+ + S EL++ +RES KED K + RR +++ + ++YL N +
Sbjct: 48 EDTMCSETPPKSRIPSREELLEMIRESEKEDHKYSEHARRKRQTSRITYQEYLDNLGKAD 107
Query: 117 KTVAGEESYVEL 128
V EE ++E+
Sbjct: 108 YDVRIEEGWLEI 119
>gi|443321947|ref|ZP_21050984.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 73106]
gi|442788339|gb|ELR98035.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 73106]
Length = 133
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A+ I DY+S +R + +G S+ ++ A+ +LA +Y+ G S PLP ++K+ + +
Sbjct: 65 ARLQINDYISRYRREPKSSGLRSFTTMQTAMNALAGYYTSYG-SRPLPEKLKNRLEQEFQ 123
Query: 162 TAE 164
E
Sbjct: 124 QVE 126
>gi|428300966|ref|YP_007139272.1| photosystem II protein Psb27 [Calothrix sp. PCC 6303]
gi|428237510|gb|AFZ03300.1| photosystem II protein Psb27 [Calothrix sp. PCC 6303]
Length = 132
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + ++ TLR +L E P D N A++ I D+ S ++ +V S+ +
Sbjct: 33 YSQDTLTVISTLRNAL-ELPNDAENKIAIQSEARQKINDFYSRYQRSNSVGTLSSFTTMR 91
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ SLA YS + P+ P+P ++K + + E L
Sbjct: 92 TALNSLAGHYS-SYPNRPVPQKLKDRLEQEFAQVEAAL 128
>gi|452821958|gb|EME28982.1| photosystem II Psb27 protein [Galdieria sulphuraria]
Length = 193
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 66 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 122
L Y + R +V++LR + ++ P+ + +R ++ + D++S +R VAG
Sbjct: 89 LTGQYEQDVRNMVESLRMACDLQRDTPEHDSTVQR----IRKQMSDFVSFYRRNPNVAGS 144
Query: 123 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 165
S+ + AI ++A Y+ G P+P + K+ + E+
Sbjct: 145 PSFSTIYTAINTVAGHYTTFGTEYPIPEKRKARLEQQFKDIER 187
>gi|348501984|ref|XP_003438549.1| PREDICTED: hypothetical protein LOC100712247 [Oreochromis
niloticus]
Length = 2910
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 18 SRLSWQTLTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSAREL 77
S LS+ + + PV D+S +++K + + D N++ SG V K Y REL
Sbjct: 315 SGLSFLSASDFPVLGADLSLTKEQKTK--------VRDANQREGSGPVFNKGYHAQLREL 366
Query: 78 V-KTLR--ESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRS 134
+ + +R E+++ D +D RRN D +++I + + + +AGE V +K I
Sbjct: 367 LGENMRAVEAMEADQEDFNGRRRNRDMDQDTINSLMESVI--REIAGEGELVTTKKVISR 424
Query: 135 LASFYSKAGP 144
+ P
Sbjct: 425 VCRLVPSLDP 434
>gi|87123889|ref|ZP_01079739.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9917]
gi|86168458|gb|EAQ69715.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9917]
Length = 145
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 89 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148
P+D A+ A+ I DY+S +R + V G S+ ++ A+ SLA Y+ + PL
Sbjct: 64 PQDDADRPEAEAEARTLINDYMSRYRPRPQVNGLASFTTMQTALNSLAGHYNTYA-NRPL 122
Query: 149 PGEVKSEILNDLDTAEK 165
P +K + +L AE+
Sbjct: 123 PEGLKERVDKELTKAER 139
>gi|290760258|gb|ADD54622.1| chloroplast photosystem II Z-like precursor [Galdieria sulphuraria]
Length = 118
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 65 VLPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 121
+ P R +V++LR + ++ P+ + +R ++ + D++S +R VAG
Sbjct: 13 MCPYDIFADVRNMVESLRMACDLQRDTPEHDSTVQR----IRKQMSDFVSFYRRNPNVAG 68
Query: 122 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
S+ + AI ++A Y+ G P+P + K+ +
Sbjct: 69 SPSFSTIYTAINTVAGHYTTFGTEYPIPEKRKARL 103
>gi|113475412|ref|YP_721473.1| photosystem II 11 kD protein [Trichodesmium erythraeum IMS101]
gi|110166460|gb|ABG51000.1| photosystem II 11 kD protein [Trichodesmium erythraeum IMS101]
Length = 131
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 46 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKES 105
+V AI + N T SG Y + L+ +L+ ++ E P++ A+++
Sbjct: 13 LVCAIGLMGCSNPSTLSGN-----YSEDTLSLINSLKTAI-ELPENTEAKSEAQAIARQA 66
Query: 106 IRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
I DY S +R +V+ S+ + A+ SLA YS + P+ P+P ++K + + E
Sbjct: 67 INDYASRYRRDNSVSSLPSFTTMRTALDSLAGHYS-SYPNRPVPDKLKKRLAQEFKQVE 124
>gi|427708983|ref|YP_007051360.1| photosystem II protein Psb27 [Nostoc sp. PCC 7107]
gi|427361488|gb|AFY44210.1| photosystem II protein Psb27 [Nostoc sp. PCC 7107]
Length = 131
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +V TLR++L+ AD A++ I D+ + ++ ++G S+ +
Sbjct: 32 YRQDTLTVVSTLRKALEVSESSPDRVELQAD-ARQKINDFSARYQRAGAISGLSSFTTMR 90
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ SLA YS + P+ P+P ++K+ + + E L
Sbjct: 91 TALNSLAGHYS-SYPNRPVPQKLKTRLEQEFQQVESAL 127
>gi|158337545|ref|YP_001518720.1| photosystem II protein Psb27 [Acaryochloris marina MBIC11017]
gi|158307786|gb|ABW29403.1| photosystem II protein Psb27 [Acaryochloris marina MBIC11017]
Length = 136
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 89 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148
P D N N +A I +Y+S +R + +AG S++ + A+ LA Y+ + P+ PL
Sbjct: 53 PDDDPNKAENQAAAGALISEYVSRYRRKPKLAGSASFMTMATALNGLAGHYN-SYPNRPL 111
Query: 149 PGEVKSEI 156
P +K +
Sbjct: 112 PQRLKDRL 119
>gi|359460982|ref|ZP_09249545.1| putative photosystem II reaction center Psb27 protein
[Acaryochloris sp. CCMEE 5410]
Length = 120
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 89 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148
P D N N +A I +Y+S +R + +AG S++ + A+ LA Y+ + P+ PL
Sbjct: 37 PDDDPNKAENQAAAGALISEYVSRYRRKPKLAGSASFMTMATALNGLAGHYN-SYPNRPL 95
Query: 149 PGEVKSEI 156
P +K +
Sbjct: 96 PQRLKDRL 103
>gi|434392457|ref|YP_007127404.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 7428]
gi|428264298|gb|AFZ30244.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 7428]
Length = 134
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +V TLR +L + P D A++ I ++ + ++ +VAG S+ +
Sbjct: 35 YRQDTLAVVNTLRNAL-DLPDDAPEKAEAQTEARQKINEFAARYQRDGSVAGLSSFTTMR 93
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ SLA YS + P+ P+P ++K + + E L
Sbjct: 94 TALNSLAGHYS-SYPNRPVPKKLKQRLEQEFKQVEMAL 130
>gi|383863465|ref|XP_003707201.1| PREDICTED: charged multivesicular body protein 7-like [Megachile
rotundata]
Length = 438
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 41 EKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESL--KEDPKDIANFRRN 98
EK ++ I++L + T + + AY K+ +++K L ES + D +D+ +
Sbjct: 289 EKRSQILENIQNLISTIQNTHTNTAVLSAY-KTGSDVLKKLNESCLSESDVRDVMDDLSE 347
Query: 99 ADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAP 147
A ++ I LS +T+ G++SY +LEK + L PSAP
Sbjct: 348 ALDEQKEIESILS-----ETMKGDDSYTDLEKELAELIELDENVLPSAP 391
>gi|303278756|ref|XP_003058671.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459831|gb|EEH57126.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 116
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 109 YLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 164
+++ +R K + G SY + A+ +++ Y+ G PLP + K ++ + TAE
Sbjct: 54 WVAKYRRDKGITGRPSYGNVYSALNAVSGHYNNFGTKYPLPAKRKDRVMQEFGTAE 109
>gi|22300006|ref|NP_683253.1| photosystem II 11 kD protein [Thermosynechococcus elongatus BP-1]
gi|22296191|dbj|BAC10015.1| photosystem II 11 kD protein [Thermosynechococcus elongatus BP-1]
Length = 134
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 77 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 136
L+ +LRE++ P++ N + A++ + D+ + +R ++ S++ ++ A+ SLA
Sbjct: 40 LISSLREAIAL-PENDPNKKAAQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLA 98
Query: 137 SFYSKAGPSAPLPGEVKSEI 156
YS + P+ PLP ++K+ +
Sbjct: 99 GHYS-SYPNRPLPEKLKARL 117
>gi|371927280|pdb|2Y6X|A Chain A, Structure Of Psb27 From Thermosynechococcus Elongatus
Length = 113
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 77 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 136
L+ +LRE++ P++ N + A++ + D+ + +R ++ S++ ++ A+ SLA
Sbjct: 19 LISSLREAIAL-PENDPNKKAAQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLA 77
Query: 137 SFYSKAGPSAPLPGEVKSEI 156
YS + P+ PLP ++K+ +
Sbjct: 78 GHYS-SYPNRPLPEKLKARL 96
>gi|119512513|ref|ZP_01631592.1| photosystem II 11 kD protein [Nodularia spumigena CCY9414]
gi|119462820|gb|EAW43778.1| photosystem II 11 kD protein [Nodularia spumigena CCY9414]
Length = 132
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A++ I D+ + ++ +V+G S+ + A+ SLA YS + P+ P+P ++++ + +L
Sbjct: 64 ARQKINDFSARYQRDNSVSGLNSFTTMRTALNSLAGHYS-SYPNRPVPQKLRTRLEQELA 122
Query: 162 TAEKFL 167
E L
Sbjct: 123 RVETAL 128
>gi|427724512|ref|YP_007071789.1| photosystem II protein Psb27 [Leptolyngbya sp. PCC 7376]
gi|427356232|gb|AFY38955.1| photosystem II protein Psb27 [Leptolyngbya sp. PCC 7376]
Length = 137
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 87 EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSA 146
E P D N A++ + +Y+S +R V+G S+ ++ A+ +LA +YS G +
Sbjct: 54 ELPADAENRGEVQAEARQQMNEYMSRYRRDSKVSGLRSFTTMQTALNALAGYYSSYG-NR 112
Query: 147 PLPGEVKSEI 156
P+ ++K+ +
Sbjct: 113 PISKKLKTRL 122
>gi|322511284|gb|ADX06594.1| hypothetical protein 162286290 [Organic Lake phycodnavirus]
Length = 159
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 67 PKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 126
K + K E K + L++D K+ N+RRN +S WR Q+ E +
Sbjct: 26 AKKWAKKREEEAKKWAKKLRKDIKNCDNYRRNVNS-----------WRRQR-----EDWR 69
Query: 127 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
+ A+RS + Y K V SE +DL+T EK++
Sbjct: 70 RKKNAVRSGSKIYFK-------NNHVYSEFKDDLNTLEKYI 103
>gi|220906511|ref|YP_002481822.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7425]
gi|219863122|gb|ACL43461.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7425]
Length = 136
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
A+ I D+++ +R ++ SY + A+ SLA+ Y+ + P+ PLP ++K+ +
Sbjct: 64 ARAKINDFIALYRRDDSLTSLASYTTMRTALNSLAAHYT-SSPNRPLPQKLKNRL 117
>gi|195393920|ref|XP_002055600.1| GJ19448 [Drosophila virilis]
gi|194150110|gb|EDW65801.1| GJ19448 [Drosophila virilis]
Length = 888
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 22 WQTLTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTL 81
W+ L P P Q D+ +++E +V + + PN + ++ K L K + REL+K
Sbjct: 524 WR-LRPAPAQENDV-ELHEQQESKLVSSATAAPPPNTR-RTTKYLTKILASNLRELLKRE 580
Query: 82 RESLKEDPK----DIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
RE+ ++ P DI+ + N D E + LS+ T+ G ++ E
Sbjct: 581 RETKRQRPAHFGVDISKLQHNIDGWTEQEYNSLSHRPSTPTIRGRSKHIPTE 632
>gi|84997029|ref|XP_953236.1| Tpr-related protein family member [Theileria annulata strain
Ankara]
gi|65304232|emb|CAI76611.1| Tpr-related protein family member, putative [Theileria annulata]
Length = 978
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 34 DMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIA 93
D S+G +K EG+VGAIK+ D N TK+G+V+ + E+V+ E+L +
Sbjct: 428 DNSSGLAQKAEGLVGAIKTTGDTN-GTKAGEVITQ-----FNEVVQQRYETLANKTE--- 478
Query: 94 NFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVK 153
+++ +A E++++ + + KT+ E + K + + A + PG+V
Sbjct: 479 -YKQKLAAADENVQNVETAYNNLKTLY--EKILNFTKLEKKAGELENAANQLSNNPGKVN 535
Query: 154 SEILN 158
I N
Sbjct: 536 EVITN 540
>gi|300866236|ref|ZP_07110948.1| photosystem II 11 kD protein [Oscillatoria sp. PCC 6506]
gi|300335755|emb|CBN56108.1| photosystem II 11 kD protein [Oscillatoria sp. PCC 6506]
Length = 132
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A++ I D+ + +R T+ S+ + A+ SLA YS + P+ PLP ++K + ++
Sbjct: 64 ARQKINDFAATYRRDGTLTKLTSFTTMRTALNSLAGHYS-SYPNRPLPDKLKKRLESEFQ 122
Query: 162 TAEKFL 167
E L
Sbjct: 123 QVEAAL 128
>gi|126661887|ref|ZP_01732886.1| phytoene synthase [Flavobacteria bacterium BAL38]
gi|126625266|gb|EAZ95955.1| phytoene synthase [Flavobacteria bacterium BAL38]
Length = 279
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 50 IKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDY 109
+K+LFD S KV KAY S VK L S+++D +I F R AD +S DY
Sbjct: 1 MKALFDKVSNDCSVKV-TKAYSTSFSSAVKMLAPSIRQDIYNIYGFVRFADEIVDSFHDY 59
>gi|393761863|ref|ZP_10350495.1| protease [Alishewanella agri BL06]
gi|392607188|gb|EIW90067.1| protease [Alishewanella agri BL06]
Length = 593
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 23 QTLTPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLR 82
+ L P P A +S Q + + S FD KSG++ +AYL + +LV +
Sbjct: 289 KRLKPAPFHAYQLSQEQYTPQLWLYEGFTSYFDDLALIKSGRISQQAYLTALEQLVTRV- 347
Query: 83 ESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKA 142
RN +++S+ D N A + Y++ E A S+ S+Y+K
Sbjct: 348 -------------TRNPSDSRQSLSDSSFN-------AWTKYYLQDENAPNSIVSYYAKG 387
Query: 143 G 143
Sbjct: 388 A 388
>gi|434405664|ref|YP_007148549.1| photosystem II protein Psb27 [Cylindrospermum stagnale PCC 7417]
gi|428259919|gb|AFZ25869.1| photosystem II protein Psb27 [Cylindrospermum stagnale PCC 7417]
Length = 132
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A++ I D+ + ++ +V+G S+ + A+ +LA YS P+ P+P ++K+ + +L+
Sbjct: 64 ARQKITDFSARYQRVNSVSGLSSFTTMRTALNALAGHYSSY-PNRPIPEKLKNRLDKELN 122
Query: 162 TAEKFL 167
E L
Sbjct: 123 QVEAAL 128
>gi|186686231|ref|YP_001869427.1| photosystem II 11 kD protein [Nostoc punctiforme PCC 73102]
gi|186468683|gb|ACC84484.1| photosystem II 11 kD protein [Nostoc punctiforme PCC 73102]
Length = 134
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 161
A++ I D+ + ++ +V+G S+ + A+ SLA YS P+ P+P ++K+ + +L
Sbjct: 66 ARQKINDFSARYQRVNSVSGLGSFTTMRTALNSLAGHYSSY-PNRPVPEKLKNRLEKELQ 124
Query: 162 TAEKFL 167
E L
Sbjct: 125 QVEAAL 130
>gi|56751179|ref|YP_171880.1| photosystem II 11 kD protein [Synechococcus elongatus PCC 6301]
gi|56686138|dbj|BAD79360.1| photosystem II 11 kD protein [Synechococcus elongatus PCC 6301]
Length = 135
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
A++ I D+ + +R V+G S+ ++ A+ SLA YS + P+ P+P ++K +
Sbjct: 67 ARQLINDFAARYRRDSRVSGLSSFTTMQTALNSLAGHYS-SYPNRPVPEKLKKRL 120
>gi|346321798|gb|EGX91397.1| 60S ribosomal protein L19 [Cordyceps militaris CM01]
Length = 1052
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 73 SARELVKTLRESLKEDP--KDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEK 130
S + L TL E L+E P KDIAN ++ +ES+RD LS + ++ A +E Y +E
Sbjct: 431 SMKSLAYTLIEILRESPFGKDIANDVAMSEQLRESLRDALSLYNSARSRALQEVYKSMEL 490
Query: 131 A-IRS 134
IRS
Sbjct: 491 GRIRS 495
>gi|427727805|ref|YP_007074042.1| photosystem II protein Psb27 [Nostoc sp. PCC 7524]
gi|427363724|gb|AFY46445.1| photosystem II protein Psb27 [Nostoc sp. PCC 7524]
Length = 133
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 129
Y + +V LR ++ E P+D A++ I D+ + ++ +V+G S+ +
Sbjct: 34 YRQDTLAVVNILRTAI-ELPQDSPEKAAIQAEARQKINDFSARYQRVNSVSGLSSFTTMR 92
Query: 130 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 167
A+ SLA YS + P+ P+P ++K+ + + + E L
Sbjct: 93 TALNSLAGHYS-SYPNRPVPEKLKNRLEQEFNQVEAAL 129
>gi|81299154|ref|YP_399362.1| photosystem II 11 kD protein [Synechococcus elongatus PCC 7942]
gi|81168035|gb|ABB56375.1| photosystem II 11 kD protein [Synechococcus elongatus PCC 7942]
Length = 133
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 102 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 156
A++ I D+ + +R V+G S+ ++ A+ SLA YS + P+ P+P ++K +
Sbjct: 65 ARQLINDFAARYRRDSRVSGLSSFTTMQTALNSLAGHYS-SYPNRPVPEKLKKRL 118
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.307 0.125 0.338
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,476,390,656
Number of Sequences: 23463169
Number of extensions: 94717101
Number of successful extensions: 280491
Number of sequences better than 100.0: 298
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 189
Number of HSP's that attempted gapping in prelim test: 280314
Number of HSP's gapped (non-prelim): 316
length of query: 167
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 39
effective length of database: 9,355,909,735
effective search space: 364880479665
effective search space used: 364880479665
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 71 (32.0 bits)