Query 030997
Match_columns 167
No_of_seqs 92 out of 94
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 12:00:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030997.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030997hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1texa_ c.37.1.5 (A:) Stf0 sul 65.7 1.6 0.00012 29.6 2.3 55 68-123 210-264 (265)
2 d2acva1 c.87.1.10 (A:3-463) Tr 63.5 8.8 0.00064 28.5 6.4 52 74-137 410-461 (461)
3 d1k78a1 a.4.1.5 (A:19-81) Pax- 55.0 0.85 6.2E-05 29.5 -0.7 26 132-160 2-27 (63)
4 d1e8ga1 d.58.32.1 (A:274-560) 44.6 2.1 0.00015 32.2 -0.1 31 45-75 253-285 (287)
5 d1hcia1 a.7.1.1 (A:272-396) al 43.2 1.8 0.00013 30.3 -0.6 82 66-150 11-92 (125)
6 d1i5na_ a.24.10.3 (A:) Chemota 40.2 44 0.0032 21.8 11.5 96 68-163 7-123 (128)
7 d2gmfa_ a.26.1.2 (A:) Granuloc 38.6 6 0.00043 28.5 1.6 25 123-147 65-89 (121)
8 d2j0na1 a.250.1.1 (A:144-314) 36.1 23 0.0017 26.2 4.8 70 69-161 19-88 (171)
9 d2pq6a1 c.87.1.10 (A:8-480) (I 33.4 36 0.0027 24.9 5.5 49 75-135 420-470 (473)
10 d1yvia1 a.24.10.2 (A:2-143) Hi 28.3 49 0.0036 22.4 5.2 39 65-103 44-82 (142)
11 d1mtyb_ a.25.1.2 (B:) Methane 26.9 89 0.0065 25.5 7.4 65 69-152 282-346 (384)
12 d2liga_ a.24.2.1 (A:) Aspartat 26.7 60 0.0043 23.2 5.6 17 123-139 101-117 (157)
13 d1juqa_ a.118.9.2 (A:) ADP-rib 26.6 66 0.0048 22.4 5.7 66 76-151 82-147 (151)
14 d2vcha1 c.87.1.10 (A:6-476) Hy 26.3 35 0.0025 25.1 4.2 10 106-115 455-464 (471)
15 d1qx2a_ a.39.1.1 (A:) Calbindi 25.6 42 0.003 20.1 3.9 36 103-138 4-39 (76)
16 d1sata2 d.92.1.6 (A:4-246) Met 24.5 14 0.00099 27.5 1.6 32 104-136 4-37 (243)
17 d1f44a1 a.60.9.1 (A:20-129) Cr 24.5 83 0.0061 20.1 5.6 66 68-148 24-89 (110)
18 d1u00a1 a.8.4.1 (A:504-615) Ch 23.9 91 0.0067 20.4 6.3 47 63-111 48-94 (112)
19 d2etda1 a.29.9.1 (A:35-183) Hy 23.8 47 0.0034 22.9 4.4 67 70-137 39-105 (149)
20 d1x6oa2 b.40.4.5 (A:87-165) C- 23.5 17 0.0012 24.2 1.7 34 49-87 21-54 (79)
21 d1mhqa_ a.118.9.2 (A:) ADP-rib 23.3 68 0.005 22.0 5.2 52 76-133 81-132 (143)
22 d2gfna2 a.121.1.1 (A:81-199) P 22.7 5.7 0.00041 28.2 -0.9 18 98-115 37-54 (119)
23 d2g0ua1 a.2.20.1 (A:1-84) BsaL 22.3 92 0.0067 20.7 5.4 51 43-110 14-64 (84)
24 d2oola1 d.110.2.1 (A:140-333) 22.1 42 0.003 23.7 3.9 39 66-112 2-40 (194)
25 d3ci0k2 a.60.16.1 (K:94-203) P 21.8 1E+02 0.0074 20.1 5.8 35 73-114 18-52 (110)
26 d1kapp2 d.92.1.6 (P:1-246) Met 20.6 23 0.0016 26.2 2.1 33 102-135 5-39 (246)
No 1
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=65.70 E-value=1.6 Score=29.56 Aligned_cols=55 Identities=18% Similarity=0.267 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcc
Q 030997 68 KAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEE 123 (167)
Q Consensus 68 gdY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~ 123 (167)
.+.+.|-.++++.|-+-|.+++..... ...........++|..+||.+..-.|.+
T Consensus 210 EdL~~dP~~~~~~I~~fLgl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (265)
T d1texa_ 210 PYLWRNLTEVVGTVLEALGQDPRLAPK-PVLERQADQRSDEWVERYRRDAQRDGLP 264 (265)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTCC---------------CCSTTTC-C-CCSCCC
T ss_pred HHHHhCHHHHHHHHHHHhCcCcccccc-hhhhhhcccchHHHHHHHHHHHHHcCCC
Confidence 677788889999999999997654322 2233334455567899999887766653
No 2
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=63.49 E-value=8.8 Score=28.51 Aligned_cols=52 Identities=25% Similarity=0.397 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHh
Q 030997 74 ARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLAS 137 (167)
Q Consensus 74 T~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsLAG 137 (167)
+.+|.+.|++.|+. |+ .+++.+.+.++.+++ -...|-.|++++...|++|.|
T Consensus 410 ~~~l~~a~~~vl~~---d~-~~r~~a~~l~~~~r~--------a~~~gg~s~~~~~~~~~~~~~ 461 (461)
T d2acva1 410 AEEIEKGLKDLMDK---DS-IVHKKVQEMKEMSRN--------AVVDGGSSLISVGKLIDDITG 461 (461)
T ss_dssp HHHHHHHHHHHTCT---TC-THHHHHHHHHHHHHH--------HTSTTSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC---CH-HHHHHHHHHHHHHHH--------HhcCCCchHHHHHHHHHHhcC
Confidence 45778888888853 23 345555555554442 234588899999999999876
No 3
>d1k78a1 a.4.1.5 (A:19-81) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.01 E-value=0.85 Score=29.51 Aligned_cols=26 Identities=23% Similarity=0.500 Sum_probs=20.7
Q ss_pred HHHHHhhHhhcCCCCCCChHHHHHHHHHH
Q 030997 132 IRSLASFYSKAGPSAPLPGEVKSEILNDL 160 (167)
Q Consensus 132 LNsLAGhYssyGp~~PLPek~K~Rll~EL 160 (167)
+|.|+|.|.+ -+|||-++|+||.+-.
T Consensus 2 ~n~~gg~~~~---GrPls~DLR~Riv~~~ 27 (63)
T d1k78a1 2 VNQLGGVFVN---GRPLPDVVRQRIVELA 27 (63)
T ss_dssp BCTTSCBCCT---TSCCCHHHHHHHHHHH
T ss_pred cCCCCccccC---CCcCCHHHHHHHHHHH
Confidence 4677887764 4999999999999643
No 4
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=44.58 E-value=2.1 Score=32.22 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=25.4
Q ss_pred chhhhhhhccCCCCCCcCCCC--CcHHHHHHHH
Q 030997 45 GVVGAIKSLFDPNEKTKSGKV--LPKAYLKSAR 75 (167)
Q Consensus 45 ~~~~~~~~~fdp~~~t~sg~~--L~gdY~kdT~ 75 (167)
.+..+||..||||--.--||. -|..|..++-
T Consensus 253 ~l~~~iK~a~DP~gIlNPGK~gi~p~~~~~~~~ 285 (287)
T d1e8ga1 253 RFNEVLKNAVDPNGIIAPGKSGVWPSQYSHVTW 285 (287)
T ss_dssp HHHHHHHHHHCTTCCBCTTGGGCCCTTSCHHHH
T ss_pred HHHHHHHHHhCCCcCCCCCCCCCCCcccchhhc
Confidence 477899999999999999993 5999866553
No 5
>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.21 E-value=1.8 Score=30.27 Aligned_cols=82 Identities=16% Similarity=0.261 Sum_probs=56.1
Q ss_pred CcHHHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHhhHhhcCCC
Q 030997 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPS 145 (167)
Q Consensus 66 L~gdY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsLAGhYssyGp~ 145 (167)
|-.+|.+-|.++.+-++.+++. -.|. .|-.....+++++.+|.. ||....-....-...+..-++.|-....+++-.
T Consensus 11 l~~eY~~~As~Ll~Wi~~~~~~-L~dr-~f~~t~~~iq~~l~~f~~-yr~~ekp~~~~Ek~~l~~l~~~lqt~~~~~n~~ 87 (125)
T d1hcia1 11 LMEEYERLASELLEWIRRTIPW-LENR-TPEKTMQAMQKKLEDFRD-YRRKHKPPKVQEKCQLEINFNTLQTKLRISNRP 87 (125)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHH-TTCC-CCCSSSTTTTHHHHHHHH-HHHHTHHHHHHHHHHTTTHHHHTTTTTTTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCC-CCCCCHHHHHHHHHHHHH-HhcccCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5579999999999999999984 2333 234456678888888874 555433334444556666777777788888645
Q ss_pred CCCCh
Q 030997 146 APLPG 150 (167)
Q Consensus 146 ~PLPe 150 (167)
.++|+
T Consensus 88 ~~~P~ 92 (125)
T d1hcia1 88 AFMPS 92 (125)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 55665
No 6
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=40.19 E-value=44 Score=21.83 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHh---cCCCcchHHHH---HhH---------------HHHHHHHHHHHHhccCCCCccCcchHH
Q 030997 68 KAYLKSARELVKTLRESL---KEDPKDIANFR---RNA---------------DSAKESIRDYLSNWRGQKTVAGEESYV 126 (167)
Q Consensus 68 gdY~kdT~~VV~tLReaL---~ld~~D~~k~~---~aa---------------~~Ake~IndyvsrYRr~~~V~G~~SFt 126 (167)
..|++++.+.+..|...| +-+|.|.+... ++. ...-..+-+++...|..+..-...-+.
T Consensus 7 ~~F~~Ea~e~l~~l~~~l~~le~~~~~~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l~~lr~~~~~~~~~~~~ 86 (128)
T d1i5na_ 7 QTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLMENLLDEARRGEMQLNTDIIN 86 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTSCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhhHHhhcChHHHHHHHHHHHHHHHHHHhCCCCCCHHHHH
Confidence 456667777777776665 22333432211 111 112225567888888777666667788
Q ss_pred HHHHHHHHHHhhHhhcCCCCCCChHHHHHHHHHHHHH
Q 030997 127 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 163 (167)
Q Consensus 127 tm~tALNsLAGhYssyGp~~PLPek~K~Rll~EL~~A 163 (167)
.|..++..|..+-...-...+.+...-+.|.+.|.+.
T Consensus 87 ~l~~~~d~l~~~l~~~~~~~~~~~~~~~~l~~~L~~l 123 (128)
T d1i5na_ 87 LFLETKDIMQEQLDAYKNSEEPDAASFEYICNALRQL 123 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHH
Confidence 8888888887766554222333344444566666543
No 7
>d2gmfa_ a.26.1.2 (A:) Granulocyte-macrophage colony-stimulating factor (GM-CSF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.62 E-value=6 Score=28.53 Aligned_cols=25 Identities=28% Similarity=0.511 Sum_probs=21.8
Q ss_pred chHHHHHHHHHHHHhhHhhcCCCCC
Q 030997 123 ESYVELEKAIRSLASFYSKAGPSAP 147 (167)
Q Consensus 123 ~SFttm~tALNsLAGhYssyGp~~P 147 (167)
-|++-+..+|.-+|.||..+-|-.|
T Consensus 65 Gslt~L~g~LtmmA~hYk~~CPpTp 89 (121)
T d2gmfa_ 65 GSLTKLKGPLTMMASHYKQHCPPTP 89 (121)
T ss_dssp GGGGGGHHHHHHHHHHHHHHSCCCC
T ss_pred ccHHHhccHHHHHHHHHHhcCCCCC
Confidence 3889999999999999999976555
No 8
>d2j0na1 a.250.1.1 (A:144-314) Invasin IpaD {Shigella flexneri [TaxId: 623]}
Probab=36.06 E-value=23 Score=26.21 Aligned_cols=70 Identities=10% Similarity=0.185 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHhhHhhcCCCCCC
Q 030997 69 AYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148 (167)
Q Consensus 69 dY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsLAGhYssyGp~~PL 148 (167)
+|++|..+++.+|-..|...-+|.....=-....+..|.+++.+|-+.. -|.++.+.
T Consensus 19 ~y~Q~~~~~lskls~~i~~~GkDGn~Ikfd~~~~~~~l~~~~~ky~~~~-----------------------l~~~~~~~ 75 (171)
T d2j0na1 19 QMYQDFSAVLSSLAGWISPGGNDGNSVKLQVNSLKKALEELKEKYKDKP-----------------------LYPANNTV 75 (171)
T ss_dssp HHHHHHHHHHHHHGGGEEECCSSSSEEEEEHHHHHHHHHHHHHHHTTCC-----------------------SBCSSSCB
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCeeeecHHHHHHHHHHHHHHccCCc-----------------------cCCCCCcc
Confidence 6889999999999999974334553222234666777888888884321 12234466
Q ss_pred ChHHHHHHHHHHH
Q 030997 149 PGEVKSEILNDLD 161 (167)
Q Consensus 149 Pek~K~Rll~EL~ 161 (167)
+++..+.-++||.
T Consensus 76 s~ee~~~W~k~L~ 88 (171)
T d2j0na1 76 SQEQANKWLTELG 88 (171)
T ss_dssp CHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhC
Confidence 7777777777664
No 9
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=33.45 E-value=36 Score=24.93 Aligned_cols=49 Identities=27% Similarity=0.407 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhcCCCcch--HHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHH
Q 030997 75 RELVKTLRESLKEDPKDI--ANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 135 (167)
Q Consensus 75 ~~VV~tLReaL~ld~~D~--~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsL 135 (167)
.++.++|++.|+ |+ .++++.+.+.++.++ .....|-.|++.+...||+|
T Consensus 420 ~~l~~ai~~vl~----d~~~~~~r~~a~~l~~~~~--------~a~~~gg~s~~~~~~~i~~~ 470 (473)
T d2pq6a1 420 EELAKLINEVIA----GDKGKKMKQKAMELKKKAE--------ENTRPGGCSYMNLNKVIKDV 470 (473)
T ss_dssp HHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHH--------HHTSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc----CChHHHHHHHHHHHHHHHH--------HHHhCCCCHHHHHHHHHHHH
Confidence 468888888886 43 233444444444433 11234668899999988876
No 10
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=28.29 E-value=49 Score=22.43 Aligned_cols=39 Identities=8% Similarity=0.152 Sum_probs=31.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHH
Q 030997 65 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAK 103 (167)
Q Consensus 65 ~L~gdY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ak 103 (167)
.|-..|.+++...+..|+.+++....|-..+++.+-..|
T Consensus 44 eli~~Fl~~~~~~l~~l~~al~~~~~D~~~~~~~aH~LK 82 (142)
T d1yvia1 44 EVVTLFCDDADRIINEIATLLEQPVVNFDKVDAYVHQLK 82 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 367899999999999999999876678766666665555
No 11
>d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]}
Probab=26.92 E-value=89 Score=25.47 Aligned_cols=65 Identities=15% Similarity=0.304 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHhhHhhcCCCCCC
Q 030997 69 AYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 148 (167)
Q Consensus 69 dY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsLAGhYssyGp~~PL 148 (167)
+|...-+-+...++.+|+.+ |+. .+.=|..|+.||.+|+. .-..||.+|.+=|+.+ |..+-
T Consensus 282 D~~Rh~~~~~alvk~~l~~d---pe~----~~~Nr~llq~Wi~~W~~-----------~a~~Al~~~~pi~s~~-p~~~~ 342 (384)
T d1mtyb_ 282 YFQIAKQGVQDLYYNCLGDD---PEF----SDYNRTVMRNWTGKWLE-----------PTIAALRDFMGLFAKL-PAGTT 342 (384)
T ss_dssp HHHHHHHHHHHHHCCCCCTC---TTT----HHHHHHHHHHHHHHHHH-----------HHHHHHHHHGGGGGGS-CTTSC
T ss_pred HHHHHHHHHHHHHHHHHhcC---ccc----chhHHHHHHHHHHHHHH-----------HHHHHHHHHhHHhhhc-CCCCC
Confidence 34333334444445566553 321 12335699999999965 4478999999999999 66655
Q ss_pred ChHH
Q 030997 149 PGEV 152 (167)
Q Consensus 149 Pek~ 152 (167)
+.+-
T Consensus 343 ~~~~ 346 (384)
T d1mtyb_ 343 DKEE 346 (384)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 5443
No 12
>d2liga_ a.24.2.1 (A:) Aspartate receptor, ligand-binding domain {Salmonella typhimurium [TaxId: 90371]}
Probab=26.70 E-value=60 Score=23.20 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=14.1
Q ss_pred chHHHHHHHHHHHHhhH
Q 030997 123 ESYVELEKAIRSLASFY 139 (167)
Q Consensus 123 ~SFttm~tALNsLAGhY 139 (167)
.||..++.||.+|+.|-
T Consensus 101 ~sY~~~~~aL~el~~~L 117 (157)
T d2liga_ 101 EKYQRYQAALAELIQFL 117 (157)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 68888899999988864
No 13
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.57 E-value=66 Score=22.36 Aligned_cols=66 Identities=9% Similarity=0.058 Sum_probs=32.7
Q ss_pred HHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHhhHhhcCCCCCCChH
Q 030997 76 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGE 151 (167)
Q Consensus 76 ~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsLAGhYssyGp~~PLPek 151 (167)
++.+.|...+.--...+.-.....+.+.+.|..|-..++ ++..|..+.+.|-...-.| |.-|.|.+
T Consensus 82 ~Fl~~l~kli~~k~~~~~~~~~Vk~kil~ll~~Wa~~f~---------~~~~~~~~Y~~Lk~~Gv~f-p~p~~p~~ 147 (151)
T d1juqa_ 82 RFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMALP---------EEAKIKDAYHMLKRQGIVQ-SDPPIPVD 147 (151)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHTTSCS-SCCCBCCC
T ss_pred HHHHHHHHHHcccCCCCcccHHHHHHHHHHHHHHHHHcc---------ccHHHHHHHHHHHHcCCCC-CCCCCCcc
Confidence 444555555542111121223456667777777766652 3333444455554444446 66666654
No 14
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.33 E-value=35 Score=25.12 Aligned_cols=10 Identities=10% Similarity=0.415 Sum_probs=5.2
Q ss_pred HHHHHHhccC
Q 030997 106 IRDYLSNWRG 115 (167)
Q Consensus 106 IndyvsrYRr 115 (167)
|.++|.+||+
T Consensus 455 ~~~~~~~~~~ 464 (471)
T d2vcha1 455 LSLVALKWKA 464 (471)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4455555554
No 15
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}
Probab=25.62 E-value=42 Score=20.11 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=26.7
Q ss_pred HHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHhh
Q 030997 103 KESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASF 138 (167)
Q Consensus 103 ke~IndyvsrYRr~~~V~G~~SFttm~tALNsLAGh 138 (167)
.+.|++....|-.+..=+|.-|...|..+|+.|+..
T Consensus 4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~ 39 (76)
T d1qx2a_ 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPS 39 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCc
Confidence 345667677775544347999999999999998643
No 16
>d1sata2 d.92.1.6 (A:4-246) Metalloprotease {Serratia marcescens [TaxId: 615]}
Probab=24.55 E-value=14 Score=27.54 Aligned_cols=32 Identities=13% Similarity=0.314 Sum_probs=23.1
Q ss_pred HHHHHHHHhccCCC--CccCcchHHHHHHHHHHHH
Q 030997 104 ESIRDYLSNWRGQK--TVAGEESYVELEKAIRSLA 136 (167)
Q Consensus 104 e~IndyvsrYRr~~--~V~G~~SFttm~tALNsLA 136 (167)
+.|.+++..|.|.. .|.|++||+.=+.| +.|-
T Consensus 4 ~~~~~~l~~~~r~~~~~v~gk~s~t~d~~~-~~l~ 37 (243)
T d1sata2 4 DAVDDLLHYHERGNGIQINGKDSFSNEQAG-LFIT 37 (243)
T ss_dssp HHHHHHHTTTCCCTTCEETTEECCCHHHHH-HHHT
T ss_pred HHHHHHHHHhcccCCccccCccccChhHHH-Hhcc
Confidence 57889999997654 78999999654444 4443
No 17
>d1f44a1 a.60.9.1 (A:20-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
Probab=24.47 E-value=83 Score=20.15 Aligned_cols=66 Identities=17% Similarity=0.213 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHhhHhhcCCCCC
Q 030997 68 KAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAP 147 (167)
Q Consensus 68 gdY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsLAGhYssyGp~~P 147 (167)
..|..|-.....-+.+- ..++-+. -.+.|.+|+..-+.. --+.+|+..-|-+|..||.-.|-..|
T Consensus 24 ~aY~~dl~~f~~w~~~~-~~~~l~~---------~~~~v~~yl~~l~~~-----g~s~sTi~R~lsair~f~r~~g~~~p 88 (110)
T d1f44a1 24 KMLLSVCRSWAAWCKLN-NRKWFPA---------EPEDVRDYLLYLQAR-----GLAVKTIQQHLGQLNMLHRRSGLPRP 88 (110)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCTTTT---------CHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHHHHHHTTCCCG
T ss_pred HHHHHHHHHHHHHHhhh-cccccch---------hhhHHHHHHHHHHhc-----CCCccHHHHHHHHHHHHHHHcCCCCC
Confidence 35777777776665432 2222221 123678888876542 25688999999999999999885444
Q ss_pred C
Q 030997 148 L 148 (167)
Q Consensus 148 L 148 (167)
.
T Consensus 89 ~ 89 (110)
T d1f44a1 89 S 89 (110)
T ss_dssp G
T ss_pred c
Confidence 4
No 18
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}
Probab=23.93 E-value=91 Score=20.38 Aligned_cols=47 Identities=13% Similarity=0.237 Sum_probs=31.7
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHH
Q 030997 63 GKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLS 111 (167)
Q Consensus 63 g~~L~gdY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~Indyvs 111 (167)
|..|+.+-.+.....|..|+.+|.- +|........+...+....|..
T Consensus 48 ~~~L~~~e~~~i~~~i~~l~~~l~~--~d~~~I~~~~~~L~~~~~~~a~ 94 (112)
T d1u00a1 48 AALLSAAERQVIDDAAAHLSEVAQG--DDVDAIEQAIKNVDKQTQDFAA 94 (112)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHTTS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 3458888888888888888888863 5666655555555555555543
No 19
>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga maritima [TaxId: 2336]}
Probab=23.83 E-value=47 Score=22.94 Aligned_cols=67 Identities=10% Similarity=0.098 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHHHHHh
Q 030997 70 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLAS 137 (167)
Q Consensus 70 Y~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALNsLAG 137 (167)
+.+++.+-|-.+|..+. ...++..+..+....-..++.+..---+-|..-....|..++..|..+-.
T Consensus 39 ~Ek~~l~~v~~~R~~~~-~a~~~~~~~~~~~~l~~al~~l~~~~E~yP~Lka~~~~~~l~~~l~~~E~ 105 (149)
T d2etda1 39 HEKEILEEIANARAKLI-GAKTPQESAQADAELSSALSRLLAIAENYPNLKADANFRQLMDELAGTEN 105 (149)
T ss_dssp TCHHHHHHHHHHHHHHH-HCCSHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-cccchHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 44566666777777664 23455555555555555555554444455778888888888887766543
No 20
>d1x6oa2 b.40.4.5 (A:87-165) C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a) {Leishmania infantum [TaxId: 5671]}
Probab=23.51 E-value=17 Score=24.22 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=27.5
Q ss_pred hhhhccCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHhcC
Q 030997 49 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKE 87 (167)
Q Consensus 49 ~~~~~fdp~~~t~sg~~L~gdY~kdT~~VV~tLReaL~l 87 (167)
++.||.|.|-.|+.+-.||.+ -++.+.+++..+.
T Consensus 21 GflsLm~d~G~treDlkLP~d-----~elg~~I~~~f~~ 54 (79)
T d1x6oa2 21 AHLSLMDDEGESREDLDMPPD-----PALATQIKEQFDS 54 (79)
T ss_dssp CEEEEECTTSCEECCCBCCSC-----HHHHHHHHHHHHT
T ss_pred cEEEEEcCCCCcccccCCCCc-----hHHHHHHHHHHhC
Confidence 588999999999999999843 3577778777754
No 21
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.28 E-value=68 Score=22.04 Aligned_cols=52 Identities=6% Similarity=-0.002 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhccCCCCccCcchHHHHHHHHH
Q 030997 76 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIR 133 (167)
Q Consensus 76 ~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYRr~~~V~G~~SFttm~tALN 133 (167)
++++.|...+......+....++.+.+.+.|.+|...|+. .+.|.++|.-|.
T Consensus 81 ~Fl~~l~~li~~k~~~~~~~~~Vk~kil~li~~Wa~~f~~------~~~~~~~y~~Lk 132 (143)
T d1mhqa_ 81 RFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE------DIKIRDAYQMLK 132 (143)
T ss_dssp HHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHcCC------CchHHHHHHHHH
Confidence 4445555555421111112234677788888888888854 456777777664
No 22
>d2gfna2 a.121.1.1 (A:81-199) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=22.72 E-value=5.7 Score=28.23 Aligned_cols=18 Identities=33% Similarity=0.879 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHHHhccC
Q 030997 98 NADSAKESIRDYLSNWRG 115 (167)
Q Consensus 98 aa~~Ake~IndyvsrYRr 115 (167)
+.+.||..|-.|++|||+
T Consensus 37 ~ee~ar~eia~flarwr~ 54 (119)
T d2gfna2 37 AEETARGEIAAFLARWRG 54 (119)
T ss_dssp ---CCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 345688999999999986
No 23
>d2g0ua1 a.2.20.1 (A:1-84) BsaL needle protein {Burkholderia pseudomallei [TaxId: 28450]}
Probab=22.26 E-value=92 Score=20.69 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=37.2
Q ss_pred ccchhhhhhhccCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHH
Q 030997 43 EEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYL 110 (167)
Q Consensus 43 ~~~~~~~~~~~fdp~~~t~sg~~L~gdY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~Indyv 110 (167)
..|-+..|..-||.- +++..+-|++-.++|+..|+||...++ -...|++|-
T Consensus 14 ~~gyl~~v~~~f~~~-------------~~~~~~~v~~Al~aL~~~psdPa~LA~----yQ~~lseys 64 (84)
T d2g0ua1 14 WSGYLTGIGRAFDDG-------------VKDLNKQLQDAQANLTKNPSDPTALAN----YQMIMSEYN 64 (84)
T ss_dssp STHHHHHHHGGGCTT-------------THHHHHHHHHHHHHHHHSTTCHHHHHH----HHHHHHHHH
T ss_pred ccchHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHhCCCCHHHHHH----HHHHHHHHH
Confidence 447889999999864 455666777888888889999976544 444666664
No 24
>d2oola1 d.110.2.1 (A:140-333) Sensor protein PhyB2 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=22.14 E-value=42 Score=23.68 Aligned_cols=39 Identities=13% Similarity=0.177 Sum_probs=30.3
Q ss_pred CcHHHHHHHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHh
Q 030997 66 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSN 112 (167)
Q Consensus 66 L~gdY~kdT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~Indyvsr 112 (167)
+|-+|.+-...+++.+|.++++ .+.-..|-+.|++++.-
T Consensus 2 ~~~~~~r~l~~i~~~Ir~sldl--------~~Il~tav~eir~~L~~ 40 (194)
T d2oola1 2 YTNEFFRSVRVAIRRLQTAADL--------PTACWIAASEVRRITGF 40 (194)
T ss_dssp CHHHHHHHHHHHHHHHHTCCSH--------HHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHHHhcCCH--------HHHHHHHHHHHHHHHCC
Confidence 5789999999999999999976 24556666777776653
No 25
>d3ci0k2 a.60.16.1 (K:94-203) Pseudopilin GspK {Escherichia coli [TaxId: 562]}
Probab=21.82 E-value=1e+02 Score=20.12 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhcCCCcchHHHHHhHHHHHHHHHHHHHhcc
Q 030997 73 SARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWR 114 (167)
Q Consensus 73 dT~~VV~tLReaL~ld~~D~~k~~~aa~~Ake~IndyvsrYR 114 (167)
.++++.+.|-+.+.+++.++ +..-+.|.||+..-.
T Consensus 18 ~~~~~f~~Ll~~lgi~~~~a-------~~la~~l~DWiD~D~ 52 (110)
T d3ci0k2 18 LAVQQLIALISRLDVPAYRA-------ELIAESLWEFIDEDR 52 (110)
T ss_dssp HHHHHHHHHHHTTTCCHHHH-------HHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHHcCCCHHHH-------HHHHHHHHHHhCccc
Confidence 45777888888887743332 334557888887653
No 26
>d1kapp2 d.92.1.6 (P:1-246) Metalloprotease {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.56 E-value=23 Score=26.23 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhccCC--CCccCcchHHHHHHHHHHH
Q 030997 102 AKESIRDYLSNWRGQ--KTVAGEESYVELEKAIRSL 135 (167)
Q Consensus 102 Ake~IndyvsrYRr~--~~V~G~~SFttm~tALNsL 135 (167)
+.+.++.|+..|-|. ..|.|++||+.=+.+ ..|
T Consensus 5 ~~~~~~~~~~~~~r~~~~~v~gkps~~~d~a~-~ql 39 (246)
T d1kapp2 5 AYTQVDNFLHAYARGGDELVNGHPSYTVDQAA-EQI 39 (246)
T ss_dssp HHHHHHHHHTTTCCCSSSEETTEECCCHHHHH-HHH
T ss_pred hHHHHHHHHHHHhccCCcccCCCcccchhHHH-HHh
Confidence 455688899999654 378999998544433 443
Done!