BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030998
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1
Length = 731
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 3 PGLVYDIEIQDYLNYLCAMNYTSQQIRVVTGTSDFT-CEHGN----LDLNYPSFIIILNN 57
PGLVYD DY+ +LC Y +Q +R +TG D++ C GN DLNYPSF + ++
Sbjct: 586 PGLVYDANESDYVKFLCGQGYNTQAVRRITG--DYSACTSGNTGRVWDLNYPSFGLSVSP 643
Query: 58 SNTASFTFKRVLTNVADTRSTYTAAVKAPVGMTVTVEPATLSFAGKFSKAEFSLTVNINL 117
S T + F R LT+VA STY A + AP G+T++V P LSF G + F+LTV ++
Sbjct: 644 SQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI 703
Query: 118 GNAFSPKSNFLGNFGYLTWYEVKRKHTVRSPI 149
S L W + H VRSPI
Sbjct: 704 KGFVVSAS--------LVWSD--GVHYVRSPI 725
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1
Length = 749
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 20/157 (12%)
Query: 3 PGLVYDIEIQDYLNYLCAMNYTSQQIRVVTGTSDFTCEH-----GNLDLNYPSFIIILNN 57
PGLVYD++ Y+ +LC Y + + + GT +C G+ LNYP+ + L +
Sbjct: 597 PGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRS 656
Query: 58 SNTASFT-FKRVLTNVADTRSTYTAAVKAPVGMTVTVEPATLSFAGKFSKAEFSLTV--- 113
+ T++ F+R +TNV S YTA V+AP G+ +TVEP +LSF+ K F + V
Sbjct: 657 AKTSTLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFSKASQKRSFKVVVKAK 716
Query: 114 NINLGNAFSPKSNFLGNFGYLTWYEVKRKHTVRSPIV 150
+ G S G L W +H+VRSPIV
Sbjct: 717 QMTPGKIVS---------GLLVWKSP--RHSVRSPIV 742
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1
Length = 757
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 16/157 (10%)
Query: 2 DPGLVYDIEIQDYLNYLCAMNYTSQQIRVVTGTSDFTCEHGN----LDLNYPSFIIILNN 57
+PGL+YD+ +DYL +LCA+NYTS QIR V+ ++TC+ DLNYPSF + N
Sbjct: 611 NPGLIYDLTTEDYLGFLCALNYTSPQIRSVS-RRNYTCDPSKSYSVADLNYPSFAV--NV 667
Query: 58 SNTASFTFKRVLTNVADTRSTYTAAVKAP-VGMTVTVEPATLSFAGKFSKAEFSLTVNIN 116
++ + R +T+V TY+ V + G+ ++VEPA L+F K +++T ++
Sbjct: 668 DGVGAYKYTRTVTSVGGA-GTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVD 726
Query: 117 LGNAFSPKSNFLGNFGYLTWYEVKRKHTVRSPIVAAF 153
S K + +FG + W + KH V SP+ ++
Sbjct: 727 -----SSKPSGSNSFGSIEWSD--GKHVVGSPVAISW 756
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2
SV=1
Length = 775
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 1 MDPGLVYDIEIQDYLNYLCAMNYTSQQIRVVTGTSDFTC-----EHGNLDLNYPSFIIIL 55
++PGLVY+I+ DY+ YLC + +T I +T + +C ++ LNYPS +I
Sbjct: 618 INPGLVYNIQPVDYITYLCTLGFTRSDILAIT-HKNVSCNGILRKNPGFSLNYPSIAVIF 676
Query: 56 NNSNTASFTFKRVLTNVADTRSTYTAAVKAPVGMTVTVEPATLSFAGKFSKAEFSLTVNI 115
T +RV TNV S Y+ VKAP G+ V V P L F + + +
Sbjct: 677 KRGKTTEMITRRV-TNVGSPNSIYSVNVKAPEGIKVIVNPKRLVFKHVDQTLSYRVWFVL 735
Query: 116 NLGNAFSPKSNFLGNFGYLTWYEVKR-KHTVRSPIVAAFANN 156
N ++F G LTW VRSPI N
Sbjct: 736 KKKNRGGKVASFAQ--GQLTWVNSHNLMQRVRSPISVTLKTN 775
>sp|A2RTF1|CTSRB_MOUSE Cation channel sperm-associated protein subunit beta OS=Mus
musculus GN=Catsperb PE=1 SV=1
Length = 1109
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 49 PSFIIILNNSNTASFTFKRVLTNVADTRSTYTAAVKAPVGMTVTVEPATLSFAGKFSKAE 108
P I L + T S + L NV DT+ TY V M +P+ KF
Sbjct: 355 PRVITFLIDQETDSGIY---LFNVQDTKETYVT-----VAMLKDGKPSP---RPKFPSFH 403
Query: 109 FSLTVNINLGNAFSPKSNFLGNFGYLTW 136
F T + LG F P+S+FL +G W
Sbjct: 404 FPSTFTLPLGMIFHPRSHFLYVYGSQIW 431
>sp|Q9ESY9|GILT_MOUSE Gamma-interferon-inducible lysosomal thiol reductase OS=Mus
musculus GN=Ifi30 PE=1 SV=3
Length = 248
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 21/154 (13%)
Query: 23 YTSQQIRVVTGTSDFTCEHGNLD--LNYPSFIIILNNSNTASFTFKRVLTNVADTRSTYT 80
Y + Q R V+GT +FTC+HG L+ LN ++ A+F + + D
Sbjct: 98 YGNAQERNVSGTWEFTCQHGELECRLNMVEACLLDKLEKEAAFLTIVCMEEMDDMEKKLG 157
Query: 81 AAVK--APVGMTVTVEPATLSFAGKFSKAEFSLTVNINLGNAFSPKSNFLGNFGYLTWYE 138
++ AP V P ++ + + N L +A P Y+ W
Sbjct: 158 PCLQVYAP-----EVSPESIMECATGKRGTQLMHENAQLTDALHPPHE------YVPWVL 206
Query: 139 VKRKHTVRSP-----IVAAFANNSRGVTIVENIA 167
V K ++ P IV + I +IA
Sbjct: 207 VNEK-PLKDPSELLSIVCQLYQGTEKPDICSSIA 239
>sp|O43345|ZN208_HUMAN Zinc finger protein 208 OS=Homo sapiens GN=ZNF208 PE=2 SV=1
Length = 1167
Score = 33.5 bits (75), Expect = 0.65, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 30/58 (51%)
Query: 9 IEIQDYLNYLCAMNYTSQQIRVVTGTSDFTCEHGNLDLNYPSFIIILNNSNTASFTFK 66
++ ++Y+ C +++ SQ R+ T + + CE G N+ S + +++T ++
Sbjct: 173 LQCKEYVRSFCMLSHLSQHKRIYTRENSYKCEEGGKAFNWSSTLTYYKSAHTGEKPYR 230
>sp|Q499T2|GILT_RAT Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus
norvegicus GN=Ifi30 PE=2 SV=1
Length = 248
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 11/122 (9%)
Query: 23 YTSQQIRVVTGTSDFTCEHGNLD--LNYPSFIIILNNSNTASFTFKRVLTNVADTRSTYT 80
Y + Q R V+GT +FTC+HG L+ LN ++ A+F + + D
Sbjct: 98 YGNAQERNVSGTWEFTCQHGELECKLNKVEACLLDKLEKEAAFLTIVCMEEMEDMEKKLG 157
Query: 81 AAVKAPVGMTVTVEPATLSFAGKFSKAEFSLTVNINLGNAFSPKSNFLGNFGYLTWYEVK 140
++ V V P ++ + + N L +A P Y+ W V
Sbjct: 158 PCLQLYVP---EVSPESIMECATGKRGTELMHENAQLTDALQPPHE------YVPWVLVN 208
Query: 141 RK 142
K
Sbjct: 209 EK 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,402,241
Number of Sequences: 539616
Number of extensions: 2128242
Number of successful extensions: 4231
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4217
Number of HSP's gapped (non-prelim): 14
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)