Query 031001
Match_columns 167
No_of_seqs 114 out of 1075
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 12:06:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031001.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031001hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gm2_A ATP-dependent CLP prote 100.0 8.4E-51 2.9E-55 323.5 13.7 153 1-154 50-204 (205)
2 3p2l_A ATP-dependent CLP prote 100.0 2.9E-44 1E-48 285.4 12.7 149 2-160 53-201 (201)
3 3qwd_A ATP-dependent CLP prote 100.0 3.1E-43 1.1E-47 279.8 13.2 146 2-157 50-195 (203)
4 1tg6_A Putative ATP-dependent 100.0 3.3E-41 1.1E-45 278.8 14.8 150 2-161 105-254 (277)
5 1yg6_A ATP-dependent CLP prote 100.0 2.1E-39 7.1E-44 255.4 13.7 144 2-155 49-192 (193)
6 2f6i_A ATP-dependent CLP prote 100.0 1.2E-39 4E-44 261.2 11.4 145 2-157 62-206 (215)
7 2cby_A ATP-dependent CLP prote 100.0 9E-39 3.1E-43 254.6 13.1 150 3-162 51-200 (208)
8 1y7o_A ATP-dependent CLP prote 100.0 2.3E-37 8E-42 248.2 12.2 145 2-156 68-214 (218)
9 3viv_A 441AA long hypothetical 100.0 1.1E-28 3.7E-33 199.4 13.0 146 7-166 37-186 (230)
10 3bf0_A Protease 4; bacterial, 99.8 1.2E-19 4.1E-24 163.4 12.1 138 6-154 85-263 (593)
11 3rst_A Signal peptide peptidas 99.7 4E-16 1.4E-20 126.0 13.3 135 8-154 46-213 (240)
12 3bf0_A Protease 4; bacterial, 99.6 3.2E-15 1.1E-19 134.5 11.9 140 8-160 339-509 (593)
13 2f9i_A Acetyl-coenzyme A carbo 98.5 3.7E-07 1.3E-11 76.7 8.5 116 9-154 160-276 (327)
14 3lke_A Enoyl-COA hydratase; ny 98.5 6.7E-07 2.3E-11 72.6 9.4 102 36-159 91-194 (263)
15 2f9y_A Acetyl-COA carboxylase, 98.5 2.9E-07 1E-11 77.7 7.1 116 9-154 174-290 (339)
16 2pbp_A Enoyl-COA hydratase sub 98.5 2.4E-06 8.2E-11 69.0 12.3 96 37-154 86-183 (258)
17 1hzd_A AUH, AU-binding protein 98.4 1.9E-06 6.3E-11 70.2 10.8 101 36-156 95-195 (272)
18 1dci_A Dienoyl-COA isomerase; 98.4 1.1E-06 3.8E-11 71.5 9.4 104 37-159 98-201 (275)
19 1uiy_A Enoyl-COA hydratase; ly 98.4 2.5E-06 8.6E-11 68.6 10.5 99 36-155 84-182 (253)
20 2a7k_A CARB; crotonase, antibi 98.4 3E-06 1E-10 68.1 10.9 98 36-154 84-181 (250)
21 2ej5_A Enoyl-COA hydratase sub 98.4 2.2E-06 7.5E-11 69.1 10.1 100 36-155 84-183 (257)
22 2ppy_A Enoyl-COA hydratase; be 98.4 3.2E-06 1.1E-10 68.4 11.0 99 36-154 91-190 (265)
23 3kqf_A Enoyl-COA hydratase/iso 98.4 2.7E-06 9.1E-11 69.1 10.2 98 35-154 91-190 (265)
24 1sg4_A 3,2-trans-enoyl-COA iso 98.3 4E-06 1.4E-10 67.8 10.7 99 36-154 87-187 (260)
25 3p5m_A Enoyl-COA hydratase/iso 98.3 5.6E-06 1.9E-10 66.8 11.0 99 35-155 81-181 (255)
26 3gow_A PAAG, probable enoyl-CO 98.3 4.2E-06 1.5E-10 67.4 10.3 101 35-155 80-180 (254)
27 3r6h_A Enoyl-COA hydratase, EC 98.3 6.8E-06 2.3E-10 65.4 11.3 100 35-154 84-183 (233)
28 3qmj_A Enoyl-COA hydratase, EC 98.3 8.7E-06 3E-10 65.6 11.9 97 36-154 89-187 (256)
29 4di1_A Enoyl-COA hydratase ECH 98.3 6.9E-06 2.4E-10 67.2 11.3 98 36-155 105-204 (277)
30 3fdu_A Putative enoyl-COA hydr 98.3 6.8E-06 2.3E-10 66.7 11.0 99 35-153 88-186 (266)
31 3pea_A Enoyl-COA hydratase/iso 98.3 4.9E-06 1.7E-10 67.3 9.7 97 36-154 88-186 (261)
32 1pjh_A Enoyl-COA isomerase; EC 98.3 6.9E-06 2.4E-10 67.1 10.7 99 37-155 103-202 (280)
33 3ot6_A Enoyl-COA hydratase/iso 98.3 1.1E-05 3.7E-10 64.2 11.6 99 36-155 84-184 (232)
34 2vx2_A Enoyl-COA hydratase dom 98.2 4.7E-06 1.6E-10 68.5 9.1 98 36-154 116-213 (287)
35 3moy_A Probable enoyl-COA hydr 98.2 3.5E-06 1.2E-10 68.3 8.2 97 37-155 91-189 (263)
36 3hin_A Putative 3-hydroxybutyr 98.2 9.6E-06 3.3E-10 66.3 10.6 99 35-155 95-195 (275)
37 3hrx_A Probable enoyl-COA hydr 98.2 1.2E-05 4E-10 64.7 10.8 102 34-155 79-180 (254)
38 2uzf_A Naphthoate synthase; ly 98.2 8.6E-06 3E-10 66.3 10.2 97 36-154 97-195 (273)
39 2q35_A CURF; crotonase, lyase; 98.2 8.7E-06 3E-10 65.2 10.0 97 38-154 82-178 (243)
40 2gtr_A CDY-like, chromodomain 98.2 9.9E-06 3.4E-10 65.4 10.1 99 37-155 92-190 (261)
41 3isa_A Putative enoyl-COA hydr 98.2 1.7E-05 5.9E-10 63.8 11.4 97 36-155 88-184 (254)
42 3g64_A Putative enoyl-COA hydr 98.2 6.9E-06 2.4E-10 67.0 9.2 98 36-155 103-203 (279)
43 1wz8_A Enoyl-COA hydratase; ly 98.2 9E-06 3.1E-10 65.8 9.7 97 37-155 95-193 (264)
44 3i47_A Enoyl COA hydratase/iso 98.2 2E-05 6.8E-10 64.1 11.7 98 36-154 89-186 (268)
45 2f6q_A Peroxisomal 3,2-trans-e 98.2 2.1E-05 7.2E-10 64.2 11.8 99 37-155 112-210 (280)
46 3sll_A Probable enoyl-COA hydr 98.2 1.4E-05 4.7E-10 65.7 10.6 103 34-155 111-213 (290)
47 3he2_A Enoyl-COA hydratase ECH 98.1 8.3E-06 2.8E-10 66.4 8.8 101 33-153 94-194 (264)
48 3myb_A Enoyl-COA hydratase; ss 98.1 9.2E-06 3.2E-10 66.7 9.1 98 36-154 109-206 (286)
49 2fbm_A Y chromosome chromodoma 98.1 1.4E-05 4.6E-10 65.9 10.1 99 37-155 110-208 (291)
50 3l3s_A Enoyl-COA hydratase/iso 98.1 1.1E-05 3.9E-10 65.2 9.4 99 35-154 93-191 (263)
51 3hp0_A Putative polyketide bio 98.1 1.4E-05 4.8E-10 65.0 9.9 102 35-157 89-190 (267)
52 1ef8_A Methylmalonyl COA decar 98.1 8.7E-06 3E-10 65.7 8.5 100 35-154 85-184 (261)
53 3oc7_A Enoyl-COA hydratase; se 98.1 1.3E-05 4.4E-10 64.9 9.5 96 35-151 97-192 (267)
54 3qk8_A Enoyl-COA hydratase ECH 98.1 1E-05 3.5E-10 65.9 8.9 97 37-155 98-196 (272)
55 4fzw_A 2,3-dehydroadipyl-COA h 98.1 1.8E-05 6E-10 64.0 10.2 100 36-155 85-184 (258)
56 4fzw_C 1,2-epoxyphenylacetyl-C 98.1 1.9E-05 6.4E-10 64.4 10.4 99 37-155 102-200 (274)
57 3njd_A Enoyl-COA hydratase; ss 98.1 1.1E-05 3.8E-10 67.5 9.2 96 36-154 147-242 (333)
58 1szo_A 6-oxocamphor hydrolase; 98.1 2.3E-05 7.8E-10 63.3 10.5 98 36-154 98-196 (257)
59 3h81_A Enoyl-COA hydratase ECH 98.1 1.3E-05 4.3E-10 65.7 8.9 95 39-155 108-204 (278)
60 1nzy_A Dehalogenase, 4-chlorob 98.1 2.3E-05 7.7E-10 63.6 10.0 97 36-154 90-188 (269)
61 3gkb_A Putative enoyl-COA hydr 98.1 1.9E-05 6.6E-10 64.8 9.6 97 36-154 96-195 (287)
62 1mj3_A Enoyl-COA hydratase, mi 98.1 1.1E-05 3.6E-10 65.3 7.7 95 39-155 90-186 (260)
63 3rsi_A Putative enoyl-COA hydr 98.0 1.5E-05 5.2E-10 64.5 8.5 96 38-155 91-191 (265)
64 3rrv_A Enoyl-COA hydratase/iso 98.0 1.7E-05 5.8E-10 64.8 8.7 95 36-152 112-208 (276)
65 3t89_A 1,4-dihydroxy-2-naphtho 98.0 1.5E-05 5.2E-10 65.5 8.5 98 36-155 113-212 (289)
66 3pe8_A Enoyl-COA hydratase; em 98.0 4E-06 1.4E-10 67.8 4.4 95 39-155 85-181 (256)
67 4eml_A Naphthoate synthase; 1, 98.0 1.5E-05 5.2E-10 65.0 7.5 98 36-155 99-198 (275)
68 3t8b_A 1,4-dihydroxy-2-naphtho 98.0 3.8E-05 1.3E-09 64.6 9.8 97 37-155 158-257 (334)
69 2j5i_A P-hydroxycinnamoyl COA 98.0 1.1E-05 3.8E-10 65.8 6.3 96 39-154 99-194 (276)
70 3qxz_A Enoyl-COA hydratase/iso 97.9 3.5E-05 1.2E-09 62.4 8.8 97 36-154 88-186 (265)
71 3m6n_A RPFF protein; enoyl-COA 97.9 6E-05 2.1E-09 62.3 10.3 91 45-155 139-229 (305)
72 3qre_A Enoyl-COA hydratase, EC 97.9 1.5E-05 5E-10 65.9 6.0 96 38-155 122-219 (298)
73 3swx_A Probable enoyl-COA hydr 97.9 4.9E-05 1.7E-09 61.5 9.0 97 39-155 94-191 (265)
74 3h0u_A Putative enoyl-COA hydr 97.9 2.8E-05 9.5E-10 63.9 7.6 97 36-154 93-192 (289)
75 3lao_A Enoyl-COA hydratase/iso 97.9 5.3E-05 1.8E-09 61.1 8.9 95 39-155 97-194 (258)
76 3t3w_A Enoyl-COA hydratase; ss 97.9 3.2E-05 1.1E-09 63.2 7.4 97 37-155 108-204 (279)
77 3bpt_A 3-hydroxyisobutyryl-COA 97.9 5.1E-05 1.8E-09 64.2 8.8 98 37-155 93-190 (363)
78 4hdt_A 3-hydroxyisobutyryl-COA 97.9 7.9E-05 2.7E-09 62.9 9.8 99 36-155 95-193 (353)
79 4f47_A Enoyl-COA hydratase ECH 97.8 5E-05 1.7E-09 61.8 8.1 95 39-155 105-204 (278)
80 2w3p_A Benzoyl-COA-dihydrodiol 97.8 0.00011 3.7E-09 65.5 10.7 98 37-154 116-222 (556)
81 3trr_A Probable enoyl-COA hydr 97.8 6.6E-05 2.3E-09 60.5 8.4 92 44-155 91-182 (256)
82 2j5g_A ALR4455 protein; enzyme 97.8 4E-05 1.4E-09 62.2 7.1 96 36-154 107-205 (263)
83 1wdk_A Fatty oxidation complex 97.8 0.00016 5.5E-09 66.2 11.6 97 36-154 93-191 (715)
84 3qxi_A Enoyl-COA hydratase ECH 97.8 9.6E-05 3.3E-09 59.9 8.7 88 46-155 102-191 (265)
85 3ju1_A Enoyl-COA hydratase/iso 97.8 6.4E-05 2.2E-09 64.7 7.7 98 37-155 133-230 (407)
86 2bzr_A Propionyl-COA carboxyla 97.8 3.7E-05 1.3E-09 68.6 6.4 79 9-87 382-463 (548)
87 3r9t_A ECHA1_1; ssgcid, seattl 97.7 0.0001 3.4E-09 59.8 8.3 92 44-155 99-190 (267)
88 3r9q_A Enoyl-COA hydratase/iso 97.7 5.8E-05 2E-09 61.1 6.8 93 41-155 96-190 (262)
89 1pix_A Glutaconyl-COA decarbox 97.7 7.2E-05 2.5E-09 67.3 8.0 131 9-155 406-546 (587)
90 3tlf_A Enoyl-COA hydratase/iso 97.7 5.8E-05 2E-09 61.3 6.6 97 38-155 102-200 (274)
91 1vrg_A Propionyl-COA carboxyla 97.7 5.8E-05 2E-09 67.1 6.9 127 9-155 365-497 (527)
92 1on3_A Methylmalonyl-COA carbo 97.7 5.1E-05 1.7E-09 67.4 5.8 127 9-155 361-493 (523)
93 3zwc_A Peroxisomal bifunctiona 97.6 0.0004 1.4E-08 64.0 10.4 102 34-155 94-195 (742)
94 2f9y_B Acetyl-coenzyme A carbo 97.5 0.00028 9.7E-09 58.6 7.6 105 9-160 153-268 (304)
95 3n6r_B Propionyl-COA carboxyla 97.3 0.00041 1.4E-08 61.7 7.0 79 9-87 373-454 (531)
96 3iav_A Propionyl-COA carboxyla 97.3 0.00012 4E-09 65.2 3.2 78 9-87 367-448 (530)
97 2wtb_A MFP2, fatty acid multif 97.3 0.00063 2.2E-08 62.4 7.9 96 38-155 94-191 (725)
98 2np9_A DPGC; protein inhibitor 97.1 0.00026 8.8E-09 61.6 3.9 90 44-154 282-371 (440)
99 3u9r_B MCC beta, methylcrotony 97.1 0.0024 8.3E-08 57.0 9.4 78 9-86 387-467 (555)
100 3gf3_A Glutaconyl-COA decarbox 97.0 0.0015 5.1E-08 58.7 7.9 134 9-156 408-549 (588)
101 1x0u_A Hypothetical methylmalo 96.9 0.00014 4.6E-09 64.7 -0.2 77 9-87 360-441 (522)
102 2f9i_B Acetyl-coenzyme A carbo 96.7 0.0043 1.5E-07 51.0 7.4 102 9-155 156-267 (285)
103 2x24_A Acetyl-COA carboxylase; 96.3 0.003 1E-07 58.5 4.2 79 8-87 482-567 (793)
104 3k8x_A Acetyl-COA carboxylase; 93.9 0.026 8.8E-07 52.0 2.5 78 9-87 469-553 (758)
105 3n6r_B Propionyl-COA carboxyla 90.2 1.9 6.4E-05 38.2 9.9 64 9-83 140-213 (531)
106 1pix_A Glutaconyl-COA decarbox 75.2 4.3 0.00015 36.3 5.6 67 9-87 140-220 (587)
107 1vrg_A Propionyl-COA carboxyla 72.3 4.5 0.00015 35.7 5.0 68 9-87 133-210 (527)
108 3gf3_A Glutaconyl-COA decarbox 64.6 23 0.00079 31.6 7.9 68 9-87 141-221 (588)
109 3iav_A Propionyl-COA carboxyla 60.7 12 0.00042 33.0 5.4 68 9-87 132-209 (530)
110 3u9r_B MCC beta, methylcrotony 57.3 32 0.0011 30.5 7.5 77 9-87 156-237 (555)
111 1on3_A Methylmalonyl-COA carbo 50.2 13 0.00045 32.7 3.8 68 9-87 130-206 (523)
112 2bzr_A Propionyl-COA carboxyla 50.0 20 0.00069 31.7 5.0 68 9-87 143-220 (548)
113 1x0u_A Hypothetical methylmalo 48.9 24 0.0008 31.0 5.2 68 9-87 126-204 (522)
114 2r1j_L Repressor protein C2; p 46.8 29 0.001 20.1 4.1 32 113-144 21-52 (68)
115 2k9q_A Uncharacterized protein 46.1 29 0.00099 21.2 4.1 32 113-144 18-49 (77)
116 1adr_A P22 C2 repressor; trans 44.7 31 0.0011 20.6 4.0 32 113-144 21-52 (76)
117 1y7y_A C.AHDI; helix-turn-heli 43.4 41 0.0014 19.9 4.5 32 113-144 29-60 (74)
118 3b7h_A Prophage LP1 protein 11 41.8 42 0.0015 20.1 4.4 32 113-144 23-55 (78)
119 3f6w_A XRE-family like protein 41.5 51 0.0018 20.1 4.8 32 113-144 30-61 (83)
120 3kz3_A Repressor protein CI; f 40.1 57 0.002 19.9 4.8 32 113-144 28-59 (80)
121 2b5a_A C.BCLI; helix-turn-heli 37.8 56 0.0019 19.5 4.5 32 113-144 26-57 (77)
122 3s8q_A R-M controller protein; 37.6 55 0.0019 20.0 4.5 32 113-144 27-58 (82)
123 2wiu_B HTH-type transcriptiona 36.0 45 0.0015 20.6 3.9 48 97-144 12-59 (88)
124 2ewt_A BLDD, putative DNA-bind 34.1 56 0.0019 19.2 3.9 32 113-144 24-57 (71)
125 2ict_A Antitoxin HIGA; helix-t 33.8 44 0.0015 21.2 3.6 32 113-144 24-55 (94)
126 3g5g_A Regulatory protein; tra 33.3 65 0.0022 21.0 4.5 32 113-144 44-75 (99)
127 1oi7_A Succinyl-COA synthetase 33.0 48 0.0016 26.4 4.3 46 2-58 193-238 (288)
128 3ksx_A Nitrate transport prote 32.8 1.1E+02 0.0038 23.6 6.5 45 109-153 246-305 (324)
129 2i6e_A Hypothetical protein; N 32.4 55 0.0019 25.9 4.7 46 106-152 231-287 (301)
130 1lmb_3 Protein (lambda repress 31.8 91 0.0031 19.3 4.9 32 113-144 33-64 (92)
131 2nu8_A Succinyl-COA ligase [AD 31.1 53 0.0018 26.0 4.3 46 2-58 193-238 (288)
132 2f5x_A BUGD; periplasmic bindi 30.4 1.7E+02 0.0059 23.3 7.3 43 4-55 11-56 (312)
133 3omt_A Uncharacterized protein 29.8 72 0.0025 19.0 3.9 32 113-144 24-55 (73)
134 2xi8_A Putative transcription 28.0 87 0.003 17.8 4.0 32 113-144 17-48 (66)
135 3vk0_A NHTF, transcriptional r 27.1 92 0.0031 20.5 4.4 32 113-144 37-68 (114)
136 2fp4_A Succinyl-COA ligase [GD 26.0 59 0.002 26.1 3.7 48 2-58 201-250 (305)
137 2kpj_A SOS-response transcript 25.7 56 0.0019 20.7 3.0 32 113-144 25-56 (94)
138 3dve_B Voltage-dependent N-typ 25.4 49 0.0017 16.6 2.0 19 29-47 2-20 (23)
139 3cec_A Putative antidote prote 25.2 89 0.003 20.1 4.0 32 113-144 34-65 (104)
140 1y9q_A Transcriptional regulat 24.9 89 0.003 22.5 4.3 31 113-143 27-57 (192)
141 3bs3_A Putative DNA-binding pr 24.1 1.1E+02 0.0038 18.0 4.1 32 113-144 26-57 (76)
142 2ef8_A C.ECOT38IS, putative tr 23.6 1.3E+02 0.0043 18.1 4.4 28 113-140 26-53 (84)
143 2nxo_A Hypothetical protein SC 23.5 50 0.0017 25.6 2.8 24 110-133 223-246 (291)
144 3f52_A CLP gene regulator (CLG 23.3 1.4E+02 0.0049 19.4 4.8 43 102-144 33-75 (117)
145 2a6c_A Helix-turn-helix motif; 22.9 1E+02 0.0036 18.9 3.9 31 113-143 34-65 (83)
146 3eus_A DNA-binding protein; st 22.6 1.4E+02 0.0047 18.5 4.5 32 113-144 30-61 (86)
147 2x5n_A SPRPN10, 26S proteasome 22.0 1.1E+02 0.0038 22.5 4.4 42 9-58 106-147 (192)
148 3v7d_A Suppressor of kinetocho 21.9 2.3E+02 0.0078 20.5 6.1 31 113-143 126-157 (169)
149 2qpq_A Protein BUG27; alpha/be 21.8 2.9E+02 0.01 21.6 7.2 40 7-55 5-47 (301)
150 2yv2_A Succinyl-COA synthetase 21.3 79 0.0027 25.2 3.6 47 2-58 200-246 (297)
151 1dw9_A Cyanate lyase; cyanate 21.2 94 0.0032 22.9 3.7 33 113-145 29-61 (156)
152 1x57_A Endothelial differentia 21.1 89 0.0031 19.5 3.3 31 113-143 29-59 (91)
153 3op9_A PLI0006 protein; struct 20.5 1.3E+02 0.0044 19.6 4.1 40 103-142 15-54 (114)
No 1
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=100.00 E-value=8.4e-51 Score=323.55 Aligned_cols=153 Identities=35% Similarity=0.513 Sum_probs=147.6
Q ss_pred CCcCCCCCCCCeEEEEcCCCCC-CCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCC
Q 031001 1 MWLDFDNASKPIYLYINSSGTQ-NEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNS 79 (167)
Q Consensus 1 ~~L~~~~~~~~I~l~INS~G~~-~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s 79 (167)
|||+.++|.++|+|||||||++ +.+++.+|+|++|++|||+|+++++||+|+|.|+|+|||++|+++|++++|+++|||
T Consensus 50 l~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v~aglaIyd~m~~~~~~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a 129 (205)
T 4gm2_A 50 LYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNS 129 (205)
T ss_dssp HHHHHHCTTCCEEEEEEECTTEETTEESCTTHHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTC
T ss_pred HHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCCCEEEEEEeeehhHHHHHHhcCCCCCEEecCCC
Confidence 5788999999999999999977 568999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecccccCC-cCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 80 STKLYLPVVGRS-SGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 80 ~~miH~p~~~~~-~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
++|||||+ +++ .|+++|+++++++|.++++.+.++|+++||++.++|.++|+||+||+|+||++|||||+|+++
T Consensus 130 ~iMIHqP~-~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~m~rd~~msa~EA~eyGlID~V~~~ 204 (205)
T 4gm2_A 130 SFCLNQSY-SIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNVLERDKYFNADEAVDFKLIDHILEK 204 (205)
T ss_dssp EEEECCCC-CCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTTSCEEEEHHHHHHTTSCSEECCC
T ss_pred EEEEecCc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCcccCHHHHHHcCCccEeecC
Confidence 99999999 677 999999999999999999999999999999999999999999999999999999999999875
No 2
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=100.00 E-value=2.9e-44 Score=285.39 Aligned_cols=149 Identities=36% Similarity=0.544 Sum_probs=141.3
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCce
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSST 81 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~ 81 (167)
||+.+++.++|.|+||||| |+++++++||++|+.++.||+|+|.|.|+|+|++|+++|++++|++.|||++
T Consensus 53 ~l~~~~~~~~I~l~INSpG---------G~v~~~~~I~~~i~~~~~~v~t~~~G~AaS~g~~i~~ag~~g~r~~~p~a~i 123 (201)
T 3p2l_A 53 FLESEDPDKDIYFYINSPG---------GMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQI 123 (201)
T ss_dssp HHHHHCSSSCEEEEEEECC---------BCHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHHTSSTTCEEECTTCEE
T ss_pred HHHhcCCCCCEEEEEECCC---------CCHHHHHHHHHHHHHhCCCeEEEEcCEehhHHHHHHHcCccCCEEEcCCCeE
Confidence 5667788899999999999 9999999999999999999999999999999999999999889999999999
Q ss_pred eeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchHHHh
Q 031001 82 KLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYE 160 (167)
Q Consensus 82 miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~~~~ 160 (167)
|+|||+ ++..|+++|++++++++.++++.+.++|+++||++.+++.++|++++||||+||++|||||+|+++.+++++
T Consensus 124 miH~p~-~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~~~~ll~ 201 (201)
T 3p2l_A 124 MIHQPL-GGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREAIIK 201 (201)
T ss_dssp EECCCE-EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHHHHHTSCSEECCCSCC---
T ss_pred EEeccc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcCeeecHHHHHHcCCccEecCCHHHhhC
Confidence 999998 778999999999999999999999999999999999999999999999999999999999999999888764
No 3
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=100.00 E-value=3.1e-43 Score=279.82 Aligned_cols=146 Identities=35% Similarity=0.546 Sum_probs=139.4
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCce
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSST 81 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~ 81 (167)
||+.+++.++|.|+||||| |++++|++||++|+.++.||+|+|.|.|+|+|++|+++|++++|++.|||++
T Consensus 50 ~l~~~~~~~~I~l~InSPG---------G~v~~~~~I~~~i~~~~~~V~t~~~G~AaSag~~i~~ag~~g~r~~~p~a~i 120 (203)
T 3qwd_A 50 FLQAQDSEKDIYLYINSPG---------GSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120 (203)
T ss_dssp HHHHHCSSSCEEEEEEECC---------BCHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEE
T ss_pred HHHhcCCCCCEEEEEeCCC---------CCHHHHHHHHHHHHHhcCCcEEEEeeeehhHHHHHHHcCCcCeEEEcCCceE
Confidence 4666778899999999999 9999999999999999999999999999999999999999889999999999
Q ss_pred eeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchH
Q 031001 82 KLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 157 (167)
Q Consensus 82 miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~ 157 (167)
|+|||+ ++..|++.|++++++++.++++.+.++|+++||++.+++.++|++|+||||+||++|||||+|+++..+
T Consensus 121 miHqP~-~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d~~lta~EA~e~GliD~I~~~~~~ 195 (203)
T 3qwd_A 121 MIHQPL-GGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK 195 (203)
T ss_dssp ECCCCS-SSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSCCCEEHHHHHHHTSCSEECCCCC-
T ss_pred EEeccc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcCceecHHHHHHcCCcCEecCCccc
Confidence 999998 778999999999999999999999999999999999999999999999999999999999999988653
No 4
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=100.00 E-value=3.3e-41 Score=278.81 Aligned_cols=150 Identities=31% Similarity=0.459 Sum_probs=139.9
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCce
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSST 81 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~ 81 (167)
||+.+++.++|.|+||||| |++++|++|||+|++++.||+|+|.|+|||+|++|+++|++++|++.|||++
T Consensus 105 ~l~~ed~~k~I~L~INSPG---------GsV~ag~aIyd~I~~~k~pV~t~v~G~AASaG~~Ia~Agd~gkr~a~P~S~I 175 (277)
T 1tg6_A 105 FLQSESNKKPIHMYINSPG---------GVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRI 175 (277)
T ss_dssp HHHHHCSSSCEEEEEEECC---------BCHHHHHHHHHHHHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEE
T ss_pred HHHhcCCCCCEEEEEECCC---------CCHHHHHHHHHHHHhcCCCEEEEEccEeHHHHHHHHHCCCcCCEEEecCCEE
Confidence 4566778899999999999 9999999999999999999999999999999999999999989999999999
Q ss_pred eeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchHHHhh
Q 031001 82 KLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEK 161 (167)
Q Consensus 82 miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~~~~~ 161 (167)
|+|+|+ ++..|++.|+.+.++++.++++.+.++|+++||++.+++++++++|+|||++||++|||||+|++..+++++.
T Consensus 176 mihqP~-~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~lta~EAle~GLID~I~~~~~~~~~~ 254 (277)
T 1tg6_A 176 MIHQPS-GGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGED 254 (277)
T ss_dssp EECCCC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEECHHHHHHHTSCSEECSSCC-----
T ss_pred EEeccc-ccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcccCHHHHHHCCCCCEecCcchhhccc
Confidence 999998 7788999999999999999999999999999999999999999999999999999999999999988777654
No 5
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=100.00 E-value=2.1e-39 Score=255.42 Aligned_cols=144 Identities=38% Similarity=0.575 Sum_probs=136.6
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCce
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSST 81 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~ 81 (167)
+|+.+++.++|.|+||||| |++.++++||++|+.++.||+|+|.|+|+|+|++|+++|++++|++.|+|++
T Consensus 49 ~l~~~~~~~~I~l~InSPG---------G~v~a~~~I~~~i~~~~~pV~~~v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i 119 (193)
T 1yg6_A 49 FLEAENPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 119 (193)
T ss_dssp HHHHHCSSSCEEEEEEECC---------BCHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEE
T ss_pred HHHhcCCCCCEEEEEECcC---------CCHHHHHHHHHHHHhcCCCEEEEEeeeHHHHHHHHHHCCCcCcEEEecCcEE
Confidence 3455677899999999999 9999999999999999999999999999999999999999888999999999
Q ss_pred eeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 82 KLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 82 miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
|+|+|+ ++..|+++|+...++++.+.++.+.+.|+++||++++++++++++++|||++||+++||||+|+++.
T Consensus 120 ~ih~p~-~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA~~~GliD~i~~~~ 192 (193)
T 1yg6_A 120 MIHQPL-GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 192 (193)
T ss_dssp EECCCE-EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHHHHHTSSSEECCCC
T ss_pred EEEecc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCeEEcHHHHHHcCCCCEecCCC
Confidence 999998 6678999999999999999999999999999999999999999999999999999999999998764
No 6
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=100.00 E-value=1.2e-39 Score=261.22 Aligned_cols=145 Identities=32% Similarity=0.470 Sum_probs=130.0
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCce
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSST 81 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~ 81 (167)
+|+.+++ ++|.|+||||| |+++++++||++|+.++.||+|+|.|+|||+|++|+++|++++|++.|+|++
T Consensus 62 ~l~~~~~-k~I~l~INSPG---------Gsv~a~~~I~~~i~~~~~pV~t~v~g~AAS~g~~Ia~agd~g~i~a~p~s~i 131 (215)
T 2f6i_A 62 YLDNINH-NDIKIYINSPG---------GSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRI 131 (215)
T ss_dssp HHHHHCC-SCEEEEEEECC---------BCHHHHHHHHHHHHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEE
T ss_pred HHHhCCC-CcEEEEEECCC---------CCHHHHHHHHHHHHhcCCCEEEEEeeEhHhHHHHHHHcCCcccEEEcCCCEE
Confidence 4556677 99999999999 9999999999999999999999999999999999999999888999999999
Q ss_pred eeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchH
Q 031001 82 KLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 157 (167)
Q Consensus 82 miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~ 157 (167)
|+|+|+ +...|++.|+...++++.++++.+.++|+++||++++++++++++++|||++||+++||||+|+++..+
T Consensus 132 ~ih~p~-~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~~lta~eA~e~GLiD~I~~~~~~ 206 (215)
T 2f6i_A 132 MIHQPL-GNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIETKLP 206 (215)
T ss_dssp ESSCTT-CSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEECHHHHHHHTSCSEECCCSSC
T ss_pred EEeccc-cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCeecCHHHHHHCCCCCEecCCccc
Confidence 999998 677899999999999999999999999999999999999999999999999999999999999987654
No 7
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=100.00 E-value=9e-39 Score=254.61 Aligned_cols=150 Identities=33% Similarity=0.484 Sum_probs=128.4
Q ss_pred cCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCcee
Q 031001 3 LDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTK 82 (167)
Q Consensus 3 L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~m 82 (167)
++.+++.++|.|+||||| |++.++++||++|+.++.||+|+|.|.|+|+|++|+++|++++|++.|+|++|
T Consensus 51 ~~~~~~~k~I~l~InSPG---------G~v~a~~~I~~~i~~~~~pV~~~v~g~AaS~g~~Ia~agd~~~~~a~p~a~ig 121 (208)
T 2cby_A 51 LAAEDASKDISLYINSPG---------GSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARIL 121 (208)
T ss_dssp HHHHCSSSCEEEEEEECC---------BCHHHHHHHHHHHHHCSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEE
T ss_pred HHhCCCCCCEEEEEECCC---------CCHHHHHHHHHHHHhcCCCEEEEECcEeHHHHHHHHhCCCcCCEEEcCCcEEE
Confidence 455567899999999999 99999999999999999999999999999999999999988889999999999
Q ss_pred eecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchHHHhhh
Q 031001 83 LYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEKR 162 (167)
Q Consensus 83 iH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~~~~~~ 162 (167)
+|+|+ ++..|+++|+...++++.++++.+.+.|++++|++.+++.+++.+++|||++||+++||||+|++...+++++.
T Consensus 122 ih~p~-~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA~e~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 122 MHQPL-GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp CCCC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEEHHHHHHHTSCSEECSCC-------
T ss_pred Eeccc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCcEEcHHHHHHcCCCcEecCchHHHHHHH
Confidence 99998 67789999999999999999999999999999999999999999999999999999999999999999888753
No 8
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=100.00 E-value=2.3e-37 Score=248.17 Aligned_cols=145 Identities=32% Similarity=0.556 Sum_probs=126.8
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCce
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSST 81 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~ 81 (167)
+|+.+++.++|.|+||||| |++.++++||++|+.++.||+|+|.|.|+|+|++|+++|++++|++.|+|++
T Consensus 68 ~l~~~~~~k~I~l~InSPG---------G~v~ag~~I~~~i~~~~~pV~t~v~G~AaS~G~~Ia~a~d~g~r~a~p~a~i 138 (218)
T 1y7o_A 68 FLDAQDSTKDIYLYVNTPG---------GSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEY 138 (218)
T ss_dssp HHHHHCTTSCEEEEEEECC---------BCHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEE
T ss_pred HHHhcCCCCCEEEEEECcC---------CCHHHHHHHHHHHHhcCCCEEEEEccEeHHHHHHHHHcCCcCcEEEcCCcEE
Confidence 4566677899999999999 9999999999999999999999999999999999999999888999999999
Q ss_pred eeecccccCC--cCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCch
Q 031001 82 KLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156 (167)
Q Consensus 82 miH~p~~~~~--~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~ 156 (167)
|+|+|+ ++. .|+++|+...+++++++++.+.+.|++++|++.+++.+++++++||||+||+++||||+|+++.+
T Consensus 139 gih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 139 MIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp ECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCCC-
T ss_pred EEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCCEEcHHHHHHCCCCcEEcCcCC
Confidence 999998 666 89999999999999999999999999999999999999999999999999999999999998754
No 9
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.96 E-value=1.1e-28 Score=199.41 Aligned_cols=146 Identities=15% Similarity=0.210 Sum_probs=126.0
Q ss_pred CCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEE---ccccccHHHHHHhcCCCCceeeecCCceee
Q 031001 7 NASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVN---CGMAYGQAAMLLSVGAKGYRGLQPNSSTKL 83 (167)
Q Consensus 7 ~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~---~G~aaS~a~~i~~ag~~~~R~~~p~s~~mi 83 (167)
++.+.|.|+||||| |++.++.+||+.|+.++.||.++| .|.|+|+|++|+++|+ +|++.|+++|++
T Consensus 37 ~~~~~Ivl~inspG---------G~v~~~~~i~~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d--~~~a~p~a~ig~ 105 (230)
T 3viv_A 37 DNAEAIIIELDTPG---------GRADAMMNIVQRIQQSKIPVIIYVYPPGASAASAGTYIALGSH--LIAMAPGTSIGA 105 (230)
T ss_dssp TTCSEEEEEEEBSC---------EEHHHHHHHHHHHHTCSSCEEEEECSTTCEEETHHHHHHHTSS--EEEECTTCEEEC
T ss_pred CCCCEEEEEEeCCC---------cCHHHHHHHHHHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcC--ceeECCCCEEEe
Confidence 34789999999999 999999999999999999999999 9999999999999995 799999999999
Q ss_pred ecccc-cCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchHHHhhh
Q 031001 84 YLPVV-GRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEKR 162 (167)
Q Consensus 84 H~p~~-~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~~~~~~ 162 (167)
|+|.. .+..|+..++. .+.+..++ .+.+.|++++|++.+.+++++.+++||||+||+++||||+|.++.++++++.
T Consensus 106 ~~p~~~~~~~G~~~~~~--~k~~~~~~-~~~~~la~~~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~~~~ll~~~ 182 (230)
T 3viv_A 106 CRPILGYSQNGSIIEAP--PAITNYFI-AYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINELLKKS 182 (230)
T ss_dssp CCEEEEECTTSCEEECC--HHHHHHHH-HHHHHHHHHTTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSSHHHHHHHH
T ss_pred ccceecCCCCCCchHHH--HHHHHHHH-HHHHHHHHHhCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCCHHHHHHHh
Confidence 99983 13456643221 22333334 3447899999999999999999999999999999999999999999999998
Q ss_pred cccC
Q 031001 163 VMIT 166 (167)
Q Consensus 163 ~~~~ 166 (167)
+|.+
T Consensus 183 ~g~~ 186 (230)
T 3viv_A 183 NGMK 186 (230)
T ss_dssp TTCB
T ss_pred cCCE
Confidence 8754
No 10
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.81 E-value=1.2e-19 Score=163.39 Aligned_cols=138 Identities=18% Similarity=0.121 Sum_probs=112.0
Q ss_pred CCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcC---CCeEEEEccccccHHHHHHhcCCCCceeeecCCcee
Q 031001 6 DNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCK---SKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTK 82 (167)
Q Consensus 6 ~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~---~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~m 82 (167)
+++.+.|.|+|||||+ |++.++.+|+++|+.++ .||++++. .++|++++|++++ +++++.|++.+|
T Consensus 85 d~~ik~I~L~inspGg--------G~v~~~~~I~~~i~~~k~~gkpvva~~~-~aas~~y~lAsaa--d~i~~~P~~~vg 153 (593)
T 3bf0_A 85 DRNITGIVMDLKNFAG--------GDQPSMQYIGKALKEFRDSGKPVYAVGE-NYSQGQYYLASFA--NKIWLSPQGVVD 153 (593)
T ss_dssp CTTCCCEEEECTEEEE--------CCHHHHHHHHHHHHHHHHTTCCEEEEES-CEEHHHHHHHTTS--SEEEECTTCCEE
T ss_pred CCCceEEEEEeCCCCC--------CcHHHHHHHHHHHHHHHhcCCeEEEEEc-cchhHHHHHHHhC--CEEEECCCceEE
Confidence 4556899999999983 69999999999999885 78888865 4788888888887 689999999999
Q ss_pred eecccccC--C---------------cCChh--------------HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhh
Q 031001 83 LYLPVVGR--S---------------SGPVT--------------DMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDI 131 (167)
Q Consensus 83 iH~p~~~~--~---------------~G~~~--------------dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~ 131 (167)
+|+|.... + .|+.+ +-+...+.|+.+.+.+.+.+++++|++.+++.+++
T Consensus 154 ~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~~~~~~~va~~Rg~~~e~l~~~~ 233 (593)
T 3bf0_A 154 LHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGA 233 (593)
T ss_dssp CCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHCCHH
T ss_pred EecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99997321 0 12211 11223356677778888889999999999999999
Q ss_pred CC-------CccccHHHHHHcCcceEEeCC
Q 031001 132 QR-------PKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 132 ~~-------~~~lsa~EA~e~GliD~I~~~ 154 (167)
++ ++||+++||+++||||+|...
T Consensus 234 d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~ 263 (593)
T 3bf0_A 234 QGLLEGLTKTGGDTAKYALENKLVDALASS 263 (593)
T ss_dssp HHHHHHHHTTTTCHHHHHHHTTSSSEECCH
T ss_pred hhhhhhhhhcCCccHHHHHHCCCCCCCCCH
Confidence 88 999999999999999999843
No 11
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.68 E-value=4e-16 Score=125.97 Aligned_cols=135 Identities=20% Similarity=0.227 Sum_probs=108.9
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhh----cCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceee
Q 031001 8 ASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAY----CKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL 83 (167)
Q Consensus 8 ~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~----~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~mi 83 (167)
..+.|.|.+|||| |++..+..|++.|+. ++.||.+.+.|.|+|+|+.|+++| +.|++.|++.+++
T Consensus 46 ~v~~ivL~~~s~G---------g~~~~~~~i~~~l~~~~~~~~kPVia~v~g~a~~gG~~lA~a~--D~i~a~~~a~~g~ 114 (240)
T 3rst_A 46 TVKGIVLKVNSPG---------GGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAA--DKIFATPETLTGS 114 (240)
T ss_dssp TEEEEEEEEEECC---------BCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEETHHHHHHTTS--SEEEECTTCEEEC
T ss_pred CcEEEEEEecCCC---------CCHHHHHHHHHHHHHHHHhCCCeEEEEECCeehHhHHHHHHhC--CeeEECCCCeEec
Confidence 3467999999999 999999999999887 578999999999999999999999 5799999999888
Q ss_pred ecccc-----------------cCCcC------------ChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCC
Q 031001 84 YLPVV-----------------GRSSG------------PVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRP 134 (167)
Q Consensus 84 H~p~~-----------------~~~~G------------~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~ 134 (167)
+-... ....| +..+-+...+.++.+.+.+.+.+++..+++.+++.++++..
T Consensus 115 ~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~~~~g~ 194 (240)
T 3rst_A 115 LGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKKIADGR 194 (240)
T ss_dssp CCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHCSSC
T ss_pred cceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhcCC
Confidence 72210 00011 12233334457788888999999999999999999977765
Q ss_pred ccccHHHHHHcCcceEEeCC
Q 031001 135 KYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 135 ~~lsa~EA~e~GliD~I~~~ 154 (167)
.++++||+++||||+|...
T Consensus 195 -~~~a~~A~~~GLVD~i~~~ 213 (240)
T 3rst_A 195 -VYDGRQAKKLNLVDELGFY 213 (240)
T ss_dssp -EEEHHHHHHTTSSSEECCH
T ss_pred -cccHHHHHHcCCCcccCCH
Confidence 5699999999999999863
No 12
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.61 E-value=3.2e-15 Score=134.54 Aligned_cols=140 Identities=24% Similarity=0.243 Sum_probs=108.0
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhh---cCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeee
Q 031001 8 ASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAY---CKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 84 (167)
Q Consensus 8 ~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~---~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH 84 (167)
..+.|.|.+|||| |++.++..|++.++. .+.||++.+.|.|+|+|++|+++| +.|++.|++.++..
T Consensus 339 ~vkaVVL~i~spG---------G~~~~~~~i~~~i~~l~~~~kPVia~v~g~AasgG~~iA~aa--D~iva~p~a~~Gsi 407 (593)
T 3bf0_A 339 KVKAIVLRVNSPG---------GSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPA--NYIVANPSTLTGSI 407 (593)
T ss_dssp TEEEEEEEEEEEE---------ECHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHTTTTC--SEEEECTTCEEECC
T ss_pred CCCEEEEEecCCC---------CCHHHHHHHHHHHHHHHhCCCCEEEEECCChHHHHHHHHHhC--CEEEECCCCEeecc
Confidence 4578999999999 999999888887765 568999999999999999999999 58999999988654
Q ss_pred ccc------------ccC-----CcC-----------ChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCcc
Q 031001 85 LPV------------VGR-----SSG-----------PVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKY 136 (167)
Q Consensus 85 ~p~------------~~~-----~~G-----------~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~ 136 (167)
.+. ++- ..| +..+.+...+.++.....+.+.+++..|++.+.++.++... .
T Consensus 408 gv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~-~ 486 (593)
T 3bf0_A 408 GIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGH-V 486 (593)
T ss_dssp CEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTC-E
T ss_pred eeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCC-C
Confidence 321 110 111 22233334456666677888999999999999988777654 5
Q ss_pred ccHHHHHHcCcceEEeCCchHHHh
Q 031001 137 MQAKEAIVYGLADKIIDSQDAAYE 160 (167)
Q Consensus 137 lsa~EA~e~GliD~I~~~~~~~~~ 160 (167)
++++||+++||||+|. +.+++++
T Consensus 487 ~ta~eA~~~GLVD~v~-~~~~~~~ 509 (593)
T 3bf0_A 487 WTGQDAKANGLVDSLG-DFDDAVA 509 (593)
T ss_dssp EEHHHHHHHTSCSEEC-CHHHHHH
T ss_pred cCHHHHHHCCCCcCcc-CHHHHHH
Confidence 6999999999999998 4444444
No 13
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=98.49 E-value=3.7e-07 Score=76.73 Aligned_cols=116 Identities=21% Similarity=0.254 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCCCCCCC-CCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeeccc
Q 031001 9 SKPIYLYINSSGTQNEK-KESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPV 87 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~-~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~ 87 (167)
.-||...+||||.-.+. .|..|....+..+...+...+.|+.+++.|.|.|.|+.++++| +.+++.|++.|.+-.|.
T Consensus 160 ~~PlI~lvdt~Ga~~g~~ae~~g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~--D~via~~~A~~~v~~pe 237 (327)
T 2f9i_A 160 NRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIA--NKVLMLENSTYSVISPE 237 (327)
T ss_dssp TCCEEEEEEESCSCCCHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCC--SEEEEETTCBCBSSCHH
T ss_pred CCCEEEEEeCCCCCcchhhhhhhhHHHHHHHHHHHHhCCCCEEEEEECCcChHHHHHHHCC--CEEEEcCCceEeecCch
Confidence 46999999999954332 1333555555667788899999999999999999999988887 57999999998764332
Q ss_pred ccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 88 VGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 88 ~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+ -+.-+ ....... .+..+. ..++|++|++.|+||+|++.
T Consensus 238 -g----~a~il---~~~~~~a----------------~~A~e~----~~itA~~a~~~GlVd~VV~e 276 (327)
T 2f9i_A 238 -G----AAALL---WKDSNLA----------------KIAAET----MKITAHDIKQLGIIDDVISE 276 (327)
T ss_dssp -H----HHHHH---SSCGGGH----------------HHHHHH----HTCBHHHHHHTTSSSEEECC
T ss_pred -H----HHHHH---HHHhcch----------------HHHHHH----cCCCHHHHHHcCCceEEecC
Confidence 1 00000 0000000 000111 56999999999999999984
No 14
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=98.47 E-value=6.7e-07 Score=72.56 Aligned_cols=102 Identities=15% Similarity=0.098 Sum_probs=72.1
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+ -
T Consensus 91 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L-------~------- 154 (263)
T 3lke_A 91 NHCVLEIFTSPKVTVALINGYAYGGGFNMMLAC--DRRIALRRAKFLENFHKMGISPDLGASYFL-------P------- 154 (263)
T ss_dssp HHHHHHHHTCSSEEEEEECSEEETHHHHGGGGS--SEEEEETTCEEECCHHHHTCCCCTTHHHHH-------H-------
T ss_pred HHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHC--CEEEEcCCCEEeCchHhhCCCCCccHHHHH-------H-------
Confidence 346778889999999999999999999999999 5799999998876443322221 111111 1
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchHHH
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAY 159 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~~~ 159 (167)
+.. ....-.+++-....++|+||+++||||+|+++.+++.
T Consensus 155 ----~~v--G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~ 194 (263)
T 3lke_A 155 ----RII--GYEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQ 194 (263)
T ss_dssp ----HHH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHH
T ss_pred ----HHh--CHHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhHHH
Confidence 111 2233345555677899999999999999997455444
No 15
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=98.46 E-value=2.9e-07 Score=77.75 Aligned_cols=116 Identities=18% Similarity=0.133 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCCCCCC-CCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeeccc
Q 031001 9 SKPIYLYINSSGTQNEK-KESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPV 87 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~-~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~ 87 (167)
.-||...+||||.-.+. .|..|....+..+...+...+.|+.+++.|.|.|.|+.++++| +.+++.|++.+.+-.|.
T Consensus 174 ~lPlI~lvDt~Ga~~g~~aE~~g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~--D~via~p~A~~~v~~Pe 251 (339)
T 2f9y_A 174 KMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVG--DKVNMLQYSTYSVISPE 251 (339)
T ss_dssp TCCEEEEEEESCSCCSHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTCCC--SEEEECTTCEEESSCHH
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCcCcHHHHHHhcc--CeeeecCCCEEEeeccc
Confidence 46999999999944331 1333555556677888899999999999999999999988887 57999999998763332
Q ss_pred ccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 88 VGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 88 ~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+. ++- ....... ..+..++ ..++|++|+++|+||+|++.
T Consensus 252 -g~----asi---l~~~~~~----------------~~~Aae~----~~itA~~a~~~GlVd~VV~e 290 (339)
T 2f9y_A 252 -GC----ASI---LWKSADK----------------APLAAEA----MGIIRPRLKELKLIDSIIPE 290 (339)
T ss_dssp -HH----HHH---HSSCSTT----------------HHHHHHH----HTCSHHHHHTTTSCSCCCCC
T ss_pred -hH----HHH---HHHhhcc----------------HHHHHHH----cCCCHHHHHHcCCeeEEecC
Confidence 10 000 0000000 0111122 56999999999999999984
No 16
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=98.46 E-value=2.4e-06 Score=68.96 Aligned_cols=96 Identities=19% Similarity=0.151 Sum_probs=69.8
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-
T Consensus 86 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~----------------- 146 (258)
T 2pbp_A 86 ADWDRLSIVKTPMIAAVNGLALGGGFELALSC--DLIVASSAAEFGFPEVNLGVMPGAGGTQR----------------- 146 (258)
T ss_dssp HHHHHHHTCCSCEEEEECSEEETHHHHHHHTS--SEEEEETTCEEECGGGGGTCCCCSSHHHH-----------------
T ss_pred HHHHHHHhCCCCEEEEEcCEEEhHHHHHHHhC--CEEEEcCCCEEECcccccCCCCcccHHHH-----------------
Confidence 45778889999999999999999999999999 5799999998877554433221 11111
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+.+..| .....+++-....++|+||+++||||+|+++
T Consensus 147 -l~~~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 183 (258)
T 2pbp_A 147 -LTKLIG--PKRALEWLWTGARMSAKEAEQLGIVNRVVSP 183 (258)
T ss_dssp -HHHHHC--HHHHHHHHHHCCCEEHHHHHHTTSCSEEECG
T ss_pred -HHHHhC--HHHHHHHHHcCCccCHHHHHHcCCcceeeCh
Confidence 111122 2333445555778899999999999999865
No 17
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=98.42 E-value=1.9e-06 Score=70.25 Aligned_cols=101 Identities=17% Similarity=0.155 Sum_probs=71.9
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-.. .. .
T Consensus 95 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~-~~----~----------- 156 (272)
T 1hzd_A 95 RAVINDIANLPVPTIAAIDGLALGGGLELALAC--DIRVAASSAKMGLVETKLAIIPGGGG-TQ----R----------- 156 (272)
T ss_dssp HHHHHHHHTCSSCEEEEESEEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSSH-HH----H-----------
T ss_pred HHHHHHHHhCCCCEEEEeCceEEecHHHHHHhC--CEEEEcCCCEEeCchhccCCCCCchH-HH----H-----------
Confidence 456778889999999999999999999999999 57999999998875554332211110 00 0
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCch
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~ 156 (167)
+.+..| ...-.+++-....++|+||+++||||+|.++.+
T Consensus 157 l~r~vG--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 195 (272)
T 1hzd_A 157 LPRAIG--MSLAKELIFSARVLDGKEAKAVGLISHVLEQNQ 195 (272)
T ss_dssp HHHHHC--HHHHHHHHHHTCEEEHHHHHHHTSCSEEECCCT
T ss_pred HHHHhC--HHHHHHHHHcCCcCCHHHHHHCCCcceecChhh
Confidence 111122 223345555677889999999999999997653
No 18
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=98.42 E-value=1.1e-06 Score=71.50 Aligned_cols=104 Identities=18% Similarity=0.194 Sum_probs=72.7
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|+-++++| +-|++.++++|.+-...++..-+-. - ...+
T Consensus 98 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g-~---------------~~~l 159 (275)
T 1dci_A 98 KTFTVIEKCPKPVIAAIHGGCIGGGVDLISAC--DIRYCTQDAFFQVKEVDVGLAADVG-T---------------LQRL 159 (275)
T ss_dssp HHHHHHHHSSSCEEEEECSEEETHHHHHHTTS--SEEEEETTCEEECCGGGGTSCCCSS-H---------------HHHG
T ss_pred HHHHHHHhCCCCEEEEECCeeeHHHHHHHHhC--CEEEEeCCCEEeCcccccCCCCCcc-H---------------HHHH
Confidence 35667888999999999999999999999999 5799999998877554433221111 0 0012
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchHHH
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAY 159 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~~~ 159 (167)
.+..|. ...-.+++-....++|+||+++||||+|+++.+++.
T Consensus 160 ~r~vG~-~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~ 201 (275)
T 1dci_A 160 PKVIGN-RSLVNELTFTARKMMADEALDSGLVSRVFPDKDVML 201 (275)
T ss_dssp GGTCSC-HHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHH
T ss_pred HHHhCc-HHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHH
Confidence 233332 133445555677899999999999999997634433
No 19
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.38 E-value=2.5e-06 Score=68.59 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=71.2
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...+ |-..+.. .. .
T Consensus 84 ~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~c--D~~ia~~~a~f~~pe~~~----Gl~p~~g--~~-----------~ 144 (253)
T 1uiy_A 84 MRLFHRVYTYPKPTVAAVNGPAVAGGAGLALAC--DLVVMDEEARLGYTEVKI----GFVAALV--SV-----------I 144 (253)
T ss_dssp HHHHHHHHHCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECCHHHH----TCCCHHH--HH-----------H
T ss_pred HHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhC--CEEEEcCCcEEeCccccc----CcCCchH--HH-----------H
Confidence 345667888999999999999999999999999 579999999887643332 2222221 01 1
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.+..| .....+++-....++++||+++||||+|.++.
T Consensus 145 l~r~vG--~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 182 (253)
T 1uiy_A 145 LVRAVG--EKAAKDLLLTGRLVEAREAKALGLVNRIAPPG 182 (253)
T ss_dssp HHHHSC--HHHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred HHHHhC--HHHHHHHHHhCCccCHHHHHHCCCcceecChh
Confidence 222222 34445556667899999999999999998753
No 20
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=98.38 E-value=3e-06 Score=68.05 Aligned_cols=98 Identities=13% Similarity=0.080 Sum_probs=70.3
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...+ |-..+.... .
T Consensus 84 ~~~~~~i~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~----Gl~p~~g~~--~----------- 144 (250)
T 2a7k_A 84 IDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMF--DQRLMASTANFVMPELKH----GIGCSVGAA--I----------- 144 (250)
T ss_dssp HHHHHHHHTCCSCEEEEECSEEETHHHHHHTTS--SEEEEETTCEEECCGGGG----TCCCHHHHH--H-----------
T ss_pred HHHHHHHHcCCCCEEEEECCeEeHHHHHHHHhC--CEEEEcCCCEEeCccccc----CCCCCcHHH--H-----------
Confidence 456778889999999999999999999999999 579999999887744332 322222110 1
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+.+..| ...-.+++-....++++||+++||||+|.++
T Consensus 145 l~~~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 181 (250)
T 2a7k_A 145 LGFTHG--FSTMQEIIYQCQSLDAPRCVDYRLVNQVVES 181 (250)
T ss_dssp HHHHHC--HHHHHHHHHHCCCBCHHHHHHHTCCSEEECH
T ss_pred HHHHhH--HHHHHHHHHcCCcccHHHHHHcCCcceecCH
Confidence 111222 2334455556778999999999999999864
No 21
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=98.37 E-value=2.2e-06 Score=69.13 Aligned_cols=100 Identities=21% Similarity=0.141 Sum_probs=70.5
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-..- ..
T Consensus 84 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~-----~~----------- 145 (257)
T 2ej5_A 84 APMMKALHHLEKPVVAAVNGAAAGAGMSLALAC--DFRLLSEKASFAPAFIHVGLVPDAGHL-----YY----------- 145 (257)
T ss_dssp HHHHHHHHHCCSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCTTHH-----HH-----------
T ss_pred HHHHHHHHhCCCCEEEEECccccchhHHHHHhC--CEEEEcCCCEEeCcccccCCCCcchHH-----HH-----------
Confidence 456778889999999999999999999999999 579999999887754443322111100 00
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.+..| ...-.+++-....++++||+++||||+|.++.
T Consensus 146 l~~~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 183 (257)
T 2ej5_A 146 LPRLVG--RAKALELAVLGEKVTAEEAAALGLATKVIPLS 183 (257)
T ss_dssp HHHHHC--HHHHHHHHHHCCCEEHHHHHHHTCCSEEECGG
T ss_pred HHHHhC--HHHHHHHHHhCCccCHHHHHHcCCcceecChh
Confidence 111112 23334455557789999999999999998653
No 22
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=98.37 E-value=3.2e-06 Score=68.44 Aligned_cols=99 Identities=15% Similarity=0.115 Sum_probs=69.9
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCC-ceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNS-STKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s-~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.+++ +|.+-...++..-+-. -. ..
T Consensus 91 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~ag~f~~pe~~~Gl~p~~g-~~----~~---------- 153 (265)
T 2ppy_A 91 NETLDKIARSPQVYIACLEGHTVGGGLEMALAC--DLRFMGDEAGKIGLPEVSLGVLAGTG-GT----QR---------- 153 (265)
T ss_dssp HHHHHHHHHSSSEEEEEECSEEETHHHHHHHTS--SEEEEETTCCCEECCGGGGTCCCTTT-HH----HH----------
T ss_pred HHHHHHHHcCCCCEEEEECCEEeeHHHHHHHhC--CEEEEeCCCCEEECcccccCCCCCch-HH----HH----------
Confidence 466788899999999999999999999999999 579999999 8877444432221111 00 00
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+.+..| ...-.+++-....++++||+++||||+|.+.
T Consensus 154 -l~~~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 190 (265)
T 2ppy_A 154 -LARLIG--YSRALDMNITGETITPQEALEIGLVNRVFPQ 190 (265)
T ss_dssp -HHHHHC--HHHHHHHHHHCCCBCHHHHHHHTSSSEEECG
T ss_pred -HHHHhC--HHHHHHHHHhCCccCHHHHHHCCCcceecCH
Confidence 111122 2333444555677999999999999999864
No 23
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=98.35 E-value=2.7e-06 Score=69.06 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=70.7
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~ 112 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-+ -
T Consensus 91 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L-------~------ 155 (265)
T 3kqf_A 91 IRTTMEMVEQLPQPVIAAINGIALGGGTELSLAC--DFRIAAESASLGLTETTLAIIPGAGGTQRL-------P------ 155 (265)
T ss_dssp HHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSSHHHHH-------H------
T ss_pred HHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCcEEECcccccCcCCCccHHHHH-------H------
Confidence 4567888999999999999999999999999999 5799999999887554433221 111111 1
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+..| ...-.+++-....++++||+++||||+|++.
T Consensus 156 -----r~vG--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 190 (265)
T 3kqf_A 156 -----RLIG--VGRAKELIYTGRRISAQEAKEYGLVEFVVPV 190 (265)
T ss_dssp -----HHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred -----HHhC--HHHHHHHHHcCCCCCHHHHHHCCCccEEeCH
Confidence 1111 2223344555678999999999999999974
No 24
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=98.33 E-value=4e-06 Score=67.77 Aligned_cols=99 Identities=16% Similarity=0.245 Sum_probs=69.6
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeee--cCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQ--PNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~--p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++. ++++|.+-...+ |-..+....
T Consensus 87 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~~~a~f~~pe~~~----Gl~p~~g~~------------ 148 (260)
T 1sg4_A 87 QELWLRLYQSNLVLVSAINGACPAGGCLVALTC--DYRILADNPRYCIGLNETQL----GIIAPFWLK------------ 148 (260)
T ss_dssp HHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTS--SEEEEECCTTCCBSCCGGGG----TCCCCHHHH------------
T ss_pred HHHHHHHHcCCCCEEEEECCeeehHHHHHHHhC--CEEEEecCCCCEEeCchhhh----CCCCchhHH------------
Confidence 456778889999999999999999999999999 579999 899887643332 221111100
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
..+.+..| .....+++-....++++||+++||||+|.+.
T Consensus 149 ~~l~~~vG--~~~a~~llltg~~~~a~eA~~~GLv~~vv~~ 187 (260)
T 1sg4_A 149 DTLENTIG--HRAAERALQLGLLFPPAEALQVGIVDQVVPE 187 (260)
T ss_dssp HHHHHHHC--HHHHHHHHHHTCCBCHHHHHHHTSSSEEECG
T ss_pred HHHHHHhC--HHHHHHHHHcCCcCCHHHHHHcCCCCEecCH
Confidence 01112222 2234455556778999999999999999854
No 25
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=98.31 E-value=5.6e-06 Score=66.78 Aligned_cols=99 Identities=18% Similarity=0.174 Sum_probs=71.0
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~ 112 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+
T Consensus 81 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l-------------- 144 (255)
T 3p5m_A 81 ANRVVRAITSLPKPVIAGVHGAAVGFGCSLALAC--DLVVAAPASYFQLAFTRVGLMPDGGASALL-------------- 144 (255)
T ss_dssp HHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECGGGGGTCCCCTTHHHHT--------------
T ss_pred HHHHHHHHHhCCCCEEEEeCCeehhhHHHHHHHC--CEEEEcCCcEEeCcccccCcCCCccHHHHH--------------
Confidence 4578889999999999999999999999999999 5799999998877444332221 111111
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++++||+++||||+|.++.
T Consensus 145 ----~r~vG--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 181 (255)
T 3p5m_A 145 ----PLLIG--RARTSRMAMTAEKISAATAFEWGMISHITSAD 181 (255)
T ss_dssp ----HHHHC--HHHHHHHHHHCCCEEHHHHHHTTSCSEECCTT
T ss_pred ----HHHhC--HHHHHHHHHcCCCcCHHHHHHCCCCCEeeCHH
Confidence 11111 22223445556789999999999999998764
No 26
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=98.30 E-value=4.2e-06 Score=67.40 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=71.4
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+...- .
T Consensus 80 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~-----~----------- 141 (254)
T 3gow_A 80 YNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWG--DLRLAAVGASFTTAFVRIGLVPDSGLS-----F----------- 141 (254)
T ss_dssp HHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTC--SEEEEETTCEEECCGGGGTCCCCTTHH-----H-----------
T ss_pred HHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHC--CEEEEcCCCEEeCcccccCCCCCccHH-----H-----------
Confidence 4567888999999999999999999999999999 579999999887644443322111100 0
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+.+..| ...-.+++-....++++||+++||||+|.++.
T Consensus 142 ~l~r~vG--~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 180 (254)
T 3gow_A 142 LLPRLVG--LAKAQELLLLSPRLSAEEALALGLVHRVVPAE 180 (254)
T ss_dssp HHHHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred HHHHHhC--HHHHHHHHHcCCccCHHHHHHcCCCCEecCHH
Confidence 1111112 22234455567789999999999999998753
No 27
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=98.30 E-value=6.8e-06 Score=65.42 Aligned_cols=100 Identities=15% Similarity=0.125 Sum_probs=71.4
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. +..... .
T Consensus 84 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~---~~~~g~--~----------- 145 (233)
T 3r6h_A 84 GFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSG--DHRVAAHAYNVQANEVAIGMT---IPYAAM--E----------- 145 (233)
T ss_dssp HHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTS--SEEEECTTCCEECCGGGGTCC---CCHHHH--H-----------
T ss_pred HHHHHHHHHhCCCCEEEEECCcchHHHHHHHHhC--CEEEEeCCcEEECchhhhCCC---CCccHH--H-----------
Confidence 3567788999999999999999999999999999 579999999887643332211 112110 0
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+.++.| ...-.+++-....++|+||+++||||+|.++
T Consensus 146 ~l~~~~g--~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~ 183 (233)
T 3r6h_A 146 VLKLRLT--PSAYQQAAGLAKTFFGETALAAGFIDEISLP 183 (233)
T ss_dssp HHHHHSC--HHHHHHHHHSCCEECHHHHHHHTSCSEECCG
T ss_pred HHHHHhC--HHHHHHHHHcCCcCCHHHHHHcCCCcEeeCH
Confidence 1111222 2334555666788999999999999999865
No 28
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=98.30 E-value=8.7e-06 Score=65.56 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=69.0
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+ -+ .+
T Consensus 89 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l-------~r---~v- 155 (256)
T 3qmj_A 89 RGLIKALAGFPKPLICAVNGLGVGIGATILGYA--DLAFMSSTARLKCPFTSLGVAPEAASSYLL-------PQ---LV- 155 (256)
T ss_dssp HHHHHHHHHCCSCEEEEECSEEETHHHHGGGGC--SEEEEETTCEEECCGGGC---CCTTHHHHH-------HH---HH-
T ss_pred HHHHHHHHhCCCCEEEEECCeehhHHHHHHHhC--CEEEEeCCCEEECcccccCCCCCccHHHHH-------HH---Hh-
Confidence 457788999999999999999999999999999 5799999998877544432221 111111 10 01
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
....-.+++-....++|+||+++||||+|+++
T Consensus 156 ---------G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 187 (256)
T 3qmj_A 156 ---------GRQNAAWLLMSSEWIDAEEALRMGLVWRICSP 187 (256)
T ss_dssp ---------HHHHHHHHHHSCCCEEHHHHHHHTSSSEEECG
T ss_pred ---------CHHHHHHHHHcCCCCCHHHHHHCCCccEEeCH
Confidence 11222444556778899999999999999865
No 29
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=98.28 E-value=6.9e-06 Score=67.23 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=70.5
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+
T Consensus 105 ~~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~~~L--------------- 167 (277)
T 4di1_A 105 LEAIDAVAAIPKPTVAAVTGYALGAGLTLALAA--DWRVSGDNVKFGATEILAGLIPGGGGMGRL--------------- 167 (277)
T ss_dssp HHHHHHHHHCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCTTHHHHH---------------
T ss_pred HHHHHHHHhCCCCEEEEECCeEehhHHHHHHhC--CEEEEcCCCEEECcccccCCCCCchHHHHH---------------
Confidence 457788899999999999999999999999999 5799999998877444433221 111111
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++|+||+++||||+|++..
T Consensus 168 ---~r~vG--~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~ 204 (277)
T 4di1_A 168 ---TRVVG--SSRAKELVFSGRFFDAEEALALGLIDDMVAPD 204 (277)
T ss_dssp ---HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred ---HHHhC--HHHHHHHHHcCCCCCHHHHHHCCCccEEeChh
Confidence 11111 22334455557789999999999999999753
No 30
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=98.28 E-value=6.8e-06 Score=66.71 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=69.8
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-..- ..|
T Consensus 88 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~-----~~l--------- 151 (266)
T 3fdu_A 88 PFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQA--DLVFADNTALFQIPFVSLGLSPEGGAS-----QLL--------- 151 (266)
T ss_dssp HHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGC--SEEEECTTCEEECCTTTTTCCCCTTHH-----HHH---------
T ss_pred HHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhC--CEEEEcCCCEEECchhhhCCCCcchHH-----HHH---------
Confidence 3467788999999999999999999999999999 579999999887744443322111100 001
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeC
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 153 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~ 153 (167)
.+..| ...-.+++-....++|+||+++||||+|.+
T Consensus 152 --~r~vG--~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~ 186 (266)
T 3fdu_A 152 --VKQAG--YHKAAELLFTAKKFNAETALQAGLVNEIVE 186 (266)
T ss_dssp --HHHHC--HHHHHHHHHHCCEECHHHHHHTTSCSEECS
T ss_pred --HHHhC--HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH
Confidence 11112 223344455567799999999999999987
No 31
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=98.26 E-value=4.9e-06 Score=67.34 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=70.2
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+.
T Consensus 88 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~-------------- 151 (261)
T 3pea_A 88 QVTFERVEKCSKPVIAAIHGAALGGGLEFAMSC--HMRFATESAKLGLPELTLGLIPGFAGTQRLP-------------- 151 (261)
T ss_dssp HHHHHHHHTCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSSHHHHHH--------------
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECcccccCcCCCccHHHHHH--------------
Confidence 357788999999999999999999999999999 5799999998877544433221 2111111
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+.. ....-.+++-....++|+||+++||||+|.+.
T Consensus 152 ----r~v--G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 186 (261)
T 3pea_A 152 ----RYV--GKAKACEMMLTSTPITGAEALKWGLVNGVFAE 186 (261)
T ss_dssp ----HHH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred ----HHh--CHHHHHHHHHcCCCCCHHHHHHCCCccEecCH
Confidence 111 12333444555677999999999999999875
No 32
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=98.26 E-value=6.9e-06 Score=67.06 Aligned_cols=99 Identities=13% Similarity=-0.001 Sum_probs=70.0
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeee-cCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQ-PNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~-p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
.++..|..++.||.+.+.|.|.+.|+-++++| +-|++. ++++|.+-...++..-+-. -.. .
T Consensus 103 ~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~~ia~~~~a~f~~pe~~lGl~p~~g-~~~---------------~ 164 (280)
T 1pjh_A 103 YVTDAFIKHSKVLICCLNGPAIGLSAALVALC--DIVYSINDKVYLLYPFANLGLITEGG-TTV---------------S 164 (280)
T ss_dssp HHHHHHHHCCSEEEEEECSCEEHHHHHHHHHS--SEEEESSTTCEEECCHHHHTCCCCTT-HHH---------------H
T ss_pred HHHHHHHhCCCCEEEEECCeeeeHHHHHHHHC--CEEEEeCCCCEEeCchhhcCCCCCcc-HHH---------------H
Confidence 55678889999999999999999999999999 579999 9998776433322211111 000 1
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.+..| ...-.+++-....++|+||+++||||+|++..
T Consensus 165 l~r~vG--~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~ 202 (280)
T 1pjh_A 165 LPLKFG--TNTTYECLMFNKPFKYDIMCENGFISKNFNMP 202 (280)
T ss_dssp HHHHHC--HHHHHHHHHTTCCEEHHHHHHTTCCSEECCCC
T ss_pred HHHHhC--HHHHHHHHHhCCCCCHHHHHHCCCcceeeCCc
Confidence 111122 23345556667789999999999999999775
No 33
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=98.26 E-value=1.1e-05 Score=64.21 Aligned_cols=99 Identities=17% Similarity=0.155 Sum_probs=72.1
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecC-CceeeecccccCCcCC-hhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN-SSTKLYLPVVGRSSGP-VTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~-s~~miH~p~~~~~~G~-~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++ ++|.+-...+ |- +.+... ..
T Consensus 84 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~~a~f~~pe~~~----Gl~p~~~g~--~~--------- 146 (232)
T 3ot6_A 84 STLARRMLSHPFPIIVACPGHAVAKGAFLLLSA--DYRIGVAGPFSIGLNEVQI----GMTMHHAGI--EL--------- 146 (232)
T ss_dssp HHHHHHHHTCSSCEEEECCEEEETHHHHHHTTS--SEEEEECSSCCEECCTTTT----TCCCCHHHH--HH---------
T ss_pred HHHHHHHHcCCCCEEEEECCEeehHHHHHHHHC--CEEEEeCCCcEEECccccc----CCCCchhHH--HH---------
Confidence 467788999999999999999999999999999 57999998 7777633332 22 122110 00
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+..+. ......+++-....++|+||+++||||+|.++.
T Consensus 147 --l~~~i--g~~~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 184 (232)
T 3ot6_A 147 --ARDRL--RKSAFNRSVINAEMFDPEGAMAAGFLDKVVSVE 184 (232)
T ss_dssp --HHHHS--CHHHHHHHHTSCCEECHHHHHHHTSCSEEECTT
T ss_pred --HHHHh--CHHHHHHHHHcCCccCHHHHHHCCCCCEecCHH
Confidence 11122 234456677778899999999999999999753
No 34
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=98.23 E-value=4.7e-06 Score=68.49 Aligned_cols=98 Identities=16% Similarity=0.097 Sum_probs=71.7
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...+ |-..+.... .
T Consensus 116 ~~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~l----Gl~p~~g~~------------~- 176 (287)
T 2vx2_A 116 SKVMMHIRNHPVPVIAMVNGLATAAGCQLVASC--DIAVASDKSSFATPGVNV----GLFCSTPGV------------A- 176 (287)
T ss_dssp HHHHHHHHTCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGG----TCCCHHHHH------------H-
T ss_pred HHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhC--CEEEEcCCCEEECchhhh----CCCCchHHH------------H-
Confidence 456778899999999999999999999999999 579999999887744432 322222110 1
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+.+..| ...-.+++-....++|+||+++||||+|+++
T Consensus 177 L~r~vG--~~~A~~llltg~~i~A~eA~~~GLv~~vv~~ 213 (287)
T 2vx2_A 177 LARAVP--RKVALEMLFTGEPISAQEALLHGLLSKVVPE 213 (287)
T ss_dssp HHTTSC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred HHHHhh--HHHHHHHHHhCCCCCHHHHHHCCCcceecCH
Confidence 222223 3344555666778999999999999999865
No 35
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=98.23 E-value=3.5e-06 Score=68.32 Aligned_cols=97 Identities=15% Similarity=0.129 Sum_probs=70.1
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCC--cCChhHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~--~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. .|-..-+.
T Consensus 91 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~--------------- 153 (263)
T 3moy_A 91 SGWDSLTQVRKPIVAAVAGYALGGGCELAMLC--DLVIAADTARFGQPEITLGILPGLGGTQRLT--------------- 153 (263)
T ss_dssp HHHHHHTTCCSCEEEEECBEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCSSSTTTHHH---------------
T ss_pred HHHHHHHhCCCCEEEEECCEeehHHHHHHHHC--CEEEecCCCEEeCcccccCCCCchhHHHHHH---------------
Confidence 46788999999999999999999999999999 479999999887754443322 12221111
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+..| ...-.+++-....++++||+++||||+|.++.
T Consensus 154 ---~~vG--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 189 (263)
T 3moy_A 154 ---RAVG--KAKAMDLCLTGRSLTAEEAERVGLVSRIVPAA 189 (263)
T ss_dssp ---HHHC--HHHHHHHHHHCCEEEHHHHHHTTSCSEEECGG
T ss_pred ---HHhC--HHHHHHHHHcCCCCCHHHHHHCCCccEecCch
Confidence 1111 12233445557789999999999999998753
No 36
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=98.21 E-value=9.6e-06 Score=66.28 Aligned_cols=99 Identities=18% Similarity=0.216 Sum_probs=71.6
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~ 112 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-+
T Consensus 95 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L-------------- 158 (275)
T 3hin_A 95 WHRVFDKIQYCRVPVIAALKGAVIGGGLELACAA--HIRVAEASAYYALPEGSRGIFVGGGGSVRL-------------- 158 (275)
T ss_dssp HHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSHHHHH--------------
T ss_pred HHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECchhccCCCCCccHHHHH--------------
Confidence 3567788999999999999999999999999999 5799999998877544433221 111111
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++|+||+++||||+|+++.
T Consensus 159 ----~r~vG--~~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 195 (275)
T 3hin_A 159 ----PRLIG--VARMADMMLTGRVYSAAEGVVHGFSQYLIENG 195 (275)
T ss_dssp ----HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEESSS
T ss_pred ----HHHhC--HHHHHHHHHcCCCCCHHHHHHCCCCCEEeChh
Confidence 11112 23334455567789999999999999999764
No 37
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=98.21 E-value=1.2e-05 Score=64.70 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=70.7
Q ss_pred HHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHH
Q 031001 34 DAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 34 ~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~ 113 (167)
....++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++-.-+-..- ..|-+.
T Consensus 79 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~-----~~L~r~----- 146 (254)
T 3hrx_A 79 RYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWG--DLRLAAVGASFTTAFVRIGLVPDSGLS-----FLLPRL----- 146 (254)
T ss_dssp HHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTC--SEEEEETTCEEECCGGGGTCCCCTTHH-----HHHHHH-----
T ss_pred HHHHHHHHHHhCCCCEEEEECCEeeehhhhhhhcc--ceeeEcCCCEEEchhhCcCcCCcccHH-----HHHHHH-----
Confidence 44567889999999999999999999999999999 579999999887644433322111100 011110
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
. ....-.+++-....++|+||+++||||+|+++.
T Consensus 147 ------v--G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 180 (254)
T 3hrx_A 147 ------V--GLAKAQELLLLSPRLSAEEALALGLVHRVVPAE 180 (254)
T ss_dssp ------H--CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred ------h--CcchHHHHhhcCcccCHHHHHHCCCeEEecCcH
Confidence 1 122223334445678999999999999998764
No 38
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=98.21 E-value=8.6e-06 Score=66.29 Aligned_cols=97 Identities=18% Similarity=0.112 Sum_probs=71.2
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-+
T Consensus 97 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l--------------- 159 (273)
T 2uzf_A 97 LDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVC--DLTIAADNAIFGQTGPKVGSFDAGYGSGYL--------------- 159 (273)
T ss_dssp HHHHHHHHHSSSCEEEEECEEEETHHHHHHHHS--SEEEEETTCEEECCGGGTTCCCCSTTTHHH---------------
T ss_pred HHHHHHHHhCCCCEEEEECCEEeehhHHHHHhC--CEEEEcCCCEEECchhhhCCCCchhHHHHH---------------
Confidence 366788899999999999999999999999999 5799999998877554433221 222111
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+..| ...-.+++-....++|+||+++||||+|++.
T Consensus 160 ---~~~vG--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 195 (273)
T 2uzf_A 160 ---ARIVG--HKKAREIWYLCRQYNAQEALDMGLVNTVVPL 195 (273)
T ss_dssp ---HHHHC--HHHHHHHHHTCCCEEHHHHHHHTSSSEEECG
T ss_pred ---HHHhC--HHHHHHHHHhCCCCCHHHHHHcCCCccccCH
Confidence 11112 2333455666789999999999999999864
No 39
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=98.21 E-value=8.7e-06 Score=65.20 Aligned_cols=97 Identities=14% Similarity=0.165 Sum_probs=67.6
Q ss_pred HHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHH
Q 031001 38 IADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLA 117 (167)
Q Consensus 38 I~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a 117 (167)
++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-..- . .+.
T Consensus 82 ~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~-----~-----------~l~ 143 (243)
T 2q35_A 82 LSGLILDCEIPIIAAMQGHSFGGGLLLGLYA--DFVVFSQESVYATNFMKYGFTPVGATS-----L-----------ILR 143 (243)
T ss_dssp CHHHHHTCCSCEEEEECSEEETHHHHHHHTS--SEEEEESSSEEECCHHHHTSCCCSSHH-----H-----------HHH
T ss_pred HHHHHHhCCCCEEEEEcCccccchHHHHHhC--CEEEEeCCCEEECCccccCCCCcchHH-----H-----------HHH
Confidence 5678889999999999999999999999999 579999999877643332221111100 0 011
Q ss_pred HHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 118 KGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 118 ~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+..| ...-.+++-....++++||+++||||+|.++
T Consensus 144 ~~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 178 (243)
T 2q35_A 144 EKLG--SELAQEMIYTGENYRGKELAERGIPFPVVSR 178 (243)
T ss_dssp HHHC--HHHHHHHHHHCCCEEHHHHHHTTCSSCEECH
T ss_pred HHhC--HHHHHHHHHcCCCCCHHHHHHcCCCCEecCh
Confidence 1112 2233444555677999999999999999854
No 40
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=98.19 E-value=9.9e-06 Score=65.42 Aligned_cols=99 Identities=15% Similarity=0.113 Sum_probs=68.3
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-. -. ..|
T Consensus 92 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g-~~----~~l----------- 153 (261)
T 2gtr_A 92 NFVNTFIQFKKPIIVAVNGPAIGLGASILPLC--DVVWANEKAWFQTPYTTFGQSPDGC-ST----VMF----------- 153 (261)
T ss_dssp HHHHHHHHCCSCEEEEECSCEETHHHHTGGGS--SEEEEETTCEEECCTTTTTCCCCTT-HH----HHH-----------
T ss_pred HHHHHHHhCCCCEEEEECCeEeeHHHHHHHhC--CEEEEcCCCEEeCchhccCCCccch-HH----HHH-----------
Confidence 45667888999999999999999999999999 5799999998877444332211110 00 001
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| .....+++-....++++||+++||||+|+++.
T Consensus 154 ~~~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 190 (261)
T 2gtr_A 154 PKIMG--GASANEMLLSGRKLTAQEACGKGLVSQVFWPG 190 (261)
T ss_dssp HHHHC--HHHHHHHHHHCCCEEHHHHHHTTSCSEEECGG
T ss_pred HHHcC--HHHHHHHHHcCCCCCHHHHHHCCCcccccChh
Confidence 11112 23334445556779999999999999998653
No 41
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=98.19 E-value=1.7e-05 Score=63.84 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=72.2
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-| . ..
T Consensus 88 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~pg----~---------------~~ 146 (254)
T 3isa_A 88 EMLLQRVAGSPSLTLALAHGRNFGAGVDLFAAC--KWRYCTPEAGFRMPGLKFGLVLG----T---------------RR 146 (254)
T ss_dssp HHHHHHHHTCSSEEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECCGGGGTCCCS----H---------------HH
T ss_pred HHHHHHHHhCCCCEEEEECCeEeecchhHHHhC--CEEEEcCCCEEECchhccCccHH----H---------------HH
Confidence 456788899999999999999999999999999 57999999988775444332211 0 01
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.+..| ...-.+++-....++|+||+++||||+|+++.
T Consensus 147 l~~~vG--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 184 (254)
T 3isa_A 147 FRDIVG--ADQALSILGSARAFDADEARRIGFVRDCAAQA 184 (254)
T ss_dssp HHHHHC--HHHHHHHHTTTCEEEHHHHHHTTSSSEECCGG
T ss_pred HHHHcC--HHHHHHHHHhCCCCcHHHHHHCCCccEEeChh
Confidence 122222 23345666677889999999999999998753
No 42
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=98.19 E-value=6.9e-06 Score=67.01 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=70.1
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCC-cC--ChhHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS-SG--PVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~-~G--~~~dl~~~~~~l~~~~~~~ 112 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. -+ -..-+ -
T Consensus 103 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l-------~------ 167 (279)
T 3g64_A 103 GQVVRAVRECPFPVIAALHGVAAGAGAVLALAA--DFRVADPSTRFAFLFTRVGLSGGDMGAAYLL-------P------ 167 (279)
T ss_dssp HHHHHHHHHSSSCEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECCGGGGTCCSCCTTHHHHH-------H------
T ss_pred HHHHHHHHhCCCCEEEEEcCeeccccHHHHHhC--CEEEEeCCCEEeCchhhcCCCCCchhHHHHH-------H------
Confidence 457778899999999999999999999999999 579999999887754443322 11 11111 1
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.. ....-.+++-....++++||+++||||+|++..
T Consensus 168 -----r~v--G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 203 (279)
T 3g64_A 168 -----RVV--GLGHATRLLMLGDTVRAPEAERIGLISELTEEG 203 (279)
T ss_dssp -----HHH--CHHHHHHHHHHCCCEEHHHHHHHTCCSEECCTT
T ss_pred -----HHh--CHHHHHHHHHcCCCcCHHHHHHCCCCCEecCch
Confidence 111 122234445556779999999999999998754
No 43
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.18 E-value=9e-06 Score=65.82 Aligned_cols=97 Identities=11% Similarity=-0.007 Sum_probs=68.7
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-
T Consensus 95 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~----------------- 155 (264)
T 1wz8_A 95 DLVLGPLNFPRPVVAAVEKVAVGAGLALALAA--DIAVVGKGTRLLDGHLRLGVAAGDHAVLL----------------- 155 (264)
T ss_dssp HHHHHHHHSSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTSCCTTTHHHH-----------------
T ss_pred HHHHHHHcCCCCEEEEECCeeechhHHHHHhC--CEEEecCCCEEeCchhhcCcCCCccHHHH-----------------
Confidence 45667888999999999999999999999999 5799999998877443322211 11111
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.+..| ...-.+++-....++|+||+++||||+|+++.
T Consensus 156 -l~r~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 193 (264)
T 1wz8_A 156 -WPLLVG--MAKAKYHLLLNEPLTGEEAERLGLVALAVEDE 193 (264)
T ss_dssp -THHHHC--HHHHHHHHHHTCCEEHHHHHHHTSSSEEECGG
T ss_pred -HHHHhC--HHHHHHHHHcCCCCCHHHHHHCCCceeecChh
Confidence 111112 23334455556779999999999999998643
No 44
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=98.18 E-value=2e-05 Score=64.07 Aligned_cols=98 Identities=9% Similarity=0.032 Sum_probs=69.7
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. .+... ..|.
T Consensus 89 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~----p~~g~--~~l~--------- 151 (268)
T 3i47_A 89 GNLMYSISQSPKPTIAMVQGAAFGGGAGLAAAC--DIAIASTSARFCFSEVKLGLI----PAVIS--PYVV--------- 151 (268)
T ss_dssp HHHHHHHHHCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCC----CTTTH--HHHH---------
T ss_pred HHHHHHHHhCCCCEEEEECCEEEhHhHHHHHhC--CEEEEcCCCEEECcccccCCC----cccHH--HHHH---------
Confidence 356778889999999999999999999999999 579999999887643332221 11100 0111
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+.. ....-.+++-....++|+||+++||||+|++.
T Consensus 152 --~~v--G~~~A~~llltg~~i~A~eA~~~GLV~~vv~~ 186 (268)
T 3i47_A 152 --RAI--GERAAKMLFMSAEVFDATRAYSLNLVQHCVPD 186 (268)
T ss_dssp --HHH--CHHHHHHHHHHCCEEEHHHHHHTTSCSEEECG
T ss_pred --HHh--CHHHHHHHHHcCCccCHHHHHHcCCCcEeeCh
Confidence 111 12333455556788999999999999999876
No 45
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=98.17 E-value=2.1e-05 Score=64.24 Aligned_cols=99 Identities=15% Similarity=0.101 Sum_probs=70.8
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-. -. .. +
T Consensus 112 ~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g-~~----~~-----------L 173 (280)
T 2f6q_A 112 EFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF--DAVYASDRATFHTPFSHLGQSPEGC-SS----YT-----------F 173 (280)
T ss_dssp HHHHHHHSCCSCEEEEECSCEETHHHHGGGGC--SEEEEETTCEEECCTGGGTCCCCTT-HH----HH-----------H
T ss_pred HHHHHHHcCCCCEEEEECCeeehHHHHHHHhC--CEEEECCCcEEECchHhhCCCCccc-HH----HH-----------H
Confidence 56778889999999999999999999999999 5799999998877444332221111 00 00 1
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++|+||+++||||+|+++.
T Consensus 174 ~r~vG--~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~ 210 (280)
T 2f6q_A 174 PKIMS--PAKATEMLIFGKKLTAGEACAQGLVTEVFPDS 210 (280)
T ss_dssp HHHHC--HHHHHHHHTTCCCEEHHHHHHTTSCSEEECTT
T ss_pred HHHhC--HHHHHHHHHcCCCCCHHHHHHCCCcceEECHH
Confidence 11122 23345566678889999999999999998754
No 46
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=98.16 E-value=1.4e-05 Score=65.72 Aligned_cols=103 Identities=15% Similarity=0.077 Sum_probs=70.5
Q ss_pred HHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHH
Q 031001 34 DAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 34 ~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~ 113 (167)
....++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+..--.. .|
T Consensus 111 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~~g~~~----~L-------- 176 (290)
T 3sll_A 111 LLDEVILTLRRMHQPVIAAINGAAIGGGLCLALAC--DVRVASQDAYFRAAGINNGLTASELGLSY----LL-------- 176 (290)
T ss_dssp HHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECTTTTTTSCSCCTTHHH----HH--------
T ss_pred HHHHHHHHHHhCCCCEEEEECCeehHHHHHHHHHC--CEEEEeCCCEEECchhccCcCCCcccHHH----HH--------
Confidence 34567888899999999999999999999999999 57999999988763333222211010000 01
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++|+||+++||||+|++..
T Consensus 177 ---~r~vG--~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~ 213 (290)
T 3sll_A 177 ---PRAIG--TSRASDIMLTGRDVDADEAERIGLVSRKVASE 213 (290)
T ss_dssp ---HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGG
T ss_pred ---HHHhC--HHHHHHHHHcCCCCCHHHHHHCCCccEEeChh
Confidence 11111 22234445556779999999999999998653
No 47
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=98.15 E-value=8.3e-06 Score=66.36 Aligned_cols=101 Identities=19% Similarity=0.193 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHH
Q 031001 33 TDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 33 ~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~ 112 (167)
.....++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++ -..+... ..
T Consensus 94 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~G----l~p~~g~----~~------ 157 (264)
T 3he2_A 94 DRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQC--DLRVVAPDAFFQFPTSKYG----LALDNWS----IR------ 157 (264)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHHS--SEEEECTTCEEECTHHHHT----CCCCHHH----HH------
T ss_pred HHHHHHHHHHHhCCCCEEEEECCcEEcchhHHHHhC--CEEEEcCCCEEECcccccC----cCCcchH----HH------
Confidence 445678889999999999999999999999999999 5799999998776333322 1111100 00
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeC
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 153 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~ 153 (167)
.+.+..| ...-.+++-....++++||+++||||+|.+
T Consensus 158 --~L~r~vG--~~~A~~llltG~~i~A~eA~~~GLV~~v~~ 194 (264)
T 3he2_A 158 --RLSSLVG--HGRARAMLLSAEKLTAEIALHTGMANRIGT 194 (264)
T ss_dssp --HHHHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEECC
T ss_pred --HHHHHhC--HHHHHHHHHcCCCccHHHHHHCCCeEEEec
Confidence 1111112 233345555678899999999999999975
No 48
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=98.14 E-value=9.2e-06 Score=66.68 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=70.9
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. +.. -. + .
T Consensus 109 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~lGl~-~~g-~~--~--~----------- 169 (286)
T 3myb_A 109 TDVMLAIQRLPAPVIARVHGIATAAGCQLVAMC--DLAVATRDARFAVSGINVGLF-CST-PG--V--A----------- 169 (286)
T ss_dssp HHHHHHHHHSSSCEEEEECSCEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCC-CHH-HH--H--H-----------
T ss_pred HHHHHHHHcCCCCEEEEECCeehHHHHHHHHhC--CEEEEcCCCEEECcccccCCC-Cch-HH--H--H-----------
Confidence 467778889999999999999999999999999 579999999887744443322 111 10 0 1
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+.+. .......+++-....++|+||+++||||+|.+.
T Consensus 170 L~r~--vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~ 206 (286)
T 3myb_A 170 LSRN--VGRKAAFEMLVTGEFVSADDAKGLGLVNRVVAP 206 (286)
T ss_dssp HTTT--SCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred HHHH--cCHHHHHHHHHcCCCCCHHHHHHCCCCcEecCH
Confidence 1111 123344555656777999999999999999874
No 49
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=98.14 E-value=1.4e-05 Score=65.88 Aligned_cols=99 Identities=16% Similarity=0.166 Sum_probs=69.9
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|+-++++| +-|++.++++|.+-...++..-+-..- .. +
T Consensus 110 ~~~~~l~~~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~-----~~-----------L 171 (291)
T 2fbm_A 110 NFVNTFIQFKKPIVVSVNGPAIGLGASILPLC--DLVWANEKAWFQTPYTTFGQSPDGCSS-----IT-----------F 171 (291)
T ss_dssp HHHHHHHHCCSCEEEEECSCEETHHHHTGGGS--SEEEEETTCEEECCHHHHTCCCCTTHH-----HH-----------H
T ss_pred HHHHHHHhCCCCEEEEECCeeecHHHHHHHhC--CEEEEeCCCEEECcHHhcCCCCcccHH-----HH-----------H
Confidence 45667888999999999999999999999999 579999999887644332221111000 00 1
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| .....+++-....++|+||+++||||+|+++.
T Consensus 172 ~r~vG--~~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~ 208 (291)
T 2fbm_A 172 PKMMG--KASANEMLIAGRKLTAREACAKGLVSQVFLTG 208 (291)
T ss_dssp HHHHC--HHHHHHHHTSCCEEEHHHHHHTTSCSEEECST
T ss_pred HHHHh--HHHHHHHHHcCCccCHHHHHHCCCcceecChh
Confidence 11122 23445566677889999999999999998653
No 50
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=98.14 E-value=1.1e-05 Score=65.22 Aligned_cols=99 Identities=15% Similarity=0.097 Sum_probs=71.6
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. + ... ..
T Consensus 93 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~-~---~g~--~~----------- 153 (263)
T 3l3s_A 93 CSALMLDLAHCPKPTIALVEGIATAAGLQLMAAC--DLAYASPAARFCLPGVQNGGF-C---TTP--AV----------- 153 (263)
T ss_dssp HHHHHHHHHTCSSCEEEEESSEEETHHHHHHHHS--SEEEECTTCEEECCTTTTTSC-C---HHH--HH-----------
T ss_pred HHHHHHHHHhCCCCEEEEECCEEEHHHHHHHHHC--CEEEecCCCEEeCchhccCCC-C---ccH--HH-----------
Confidence 3567788999999999999999999999999999 579999999887743332222 1 111 00
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+.+.. ....-.+++-....++|+||+++||||+|+++
T Consensus 154 ~l~r~v--G~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 191 (263)
T 3l3s_A 154 AVSRVI--GRRAVTEMALTGATYDADWALAAGLINRILPE 191 (263)
T ss_dssp HHHTTS--CHHHHHHHHHHCCEEEHHHHHHHTSSSEECCH
T ss_pred HHHHHc--CHHHHHHHHHcCCCCCHHHHHHCCCccEEeCH
Confidence 111222 33444555666778999999999999999864
No 51
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=98.13 E-value=1.4e-05 Score=64.97 Aligned_cols=102 Identities=15% Similarity=0.048 Sum_probs=72.6
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-. . ..|-
T Consensus 89 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g--~----~~l~-------- 152 (267)
T 3hp0_A 89 LYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSAT--DIAIADQTASFSLSELLFGLYPACV--L----PFLI-------- 152 (267)
T ss_dssp HHHHHHHHHHSSSEEEEEECSEEETTHHHHHHHS--SEEEECTTCEEECCGGGGTCCCTTT--H----HHHH--------
T ss_pred HHHHHHHHHcCCCCEEEEECCEEeehHHHHHHhC--CEEEEcCCCEEECchhccCcCchhH--H----HHHH--------
Confidence 4567888999999999999999999999999999 5799999998877444433221111 1 0111
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchH
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 157 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~ 157 (167)
+.. ....-.+++-....++|+||+++||||+|.++.++
T Consensus 153 ---r~v--G~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~~ 190 (267)
T 3hp0_A 153 ---RRI--GRQKAHYMTLMTKPISVQEASEWGLIDAFDAESDV 190 (267)
T ss_dssp ---HHH--CHHHHHHHHHHCCCBCHHHHHHHTSSSCBCSCTTH
T ss_pred ---HHh--CHHHHHHHHHcCCCCCHHHHHHCCCcceecCCHHH
Confidence 111 22333445555678999999999999999976544
No 52
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.13 E-value=8.7e-06 Score=65.73 Aligned_cols=100 Identities=11% Similarity=0.113 Sum_probs=70.2
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++ -..+.... .
T Consensus 85 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~G----l~p~~g~~------------~ 146 (261)
T 1ef8_A 85 LRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSS--DLIIAASTSTFSMTPVNLG----VPYNLVGI------------H 146 (261)
T ss_dssp HHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHT----CCCCHHHH------------H
T ss_pred HHHHHHHHHhCCCCEEEEECCEEEeHhHHHHHhC--CEEEecCCCEEeCchhccC----CCCCccHH------------H
Confidence 4577888999999999999999999999999999 5799999998766333222 11111000 0
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+.+.. ....-.+++-....++++||+++||||+|+++
T Consensus 147 ~l~r~v--G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 184 (261)
T 1ef8_A 147 NLTRDA--GFHIVKELIFTASPITAQRALAVGILNHVVEV 184 (261)
T ss_dssp TTSSSS--CHHHHHHHHHHCCCEEHHHHHHTTSCSEEECH
T ss_pred HHHHHh--CHHHHHHHHHcCCccCHHHHHHCCCcccccCH
Confidence 011111 23334455555778999999999999999854
No 53
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=98.12 E-value=1.3e-05 Score=64.94 Aligned_cols=96 Identities=18% Similarity=0.093 Sum_probs=68.5
Q ss_pred HHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 35 AYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 35 g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
...++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-..- .
T Consensus 97 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~------~---------- 158 (267)
T 3oc7_A 97 MAALMRAIVESRLPVIAAIDGHVRAGGFGLVGAC--DIAVAGPRSSFALTEARIGVAPAIISL------T---------- 158 (267)
T ss_dssp HHHHHHHHHHCSSCEEEEECSEEETTHHHHHHHS--SEEEECTTCEEECCGGGGTCCCTTTHH------H----------
T ss_pred HHHHHHHHHhCCCCEEEEEcCeecccchHHHHHC--CEEEEcCCCEEeCcccccCCCcchhHH------H----------
Confidence 3457778889999999999999999999999999 579999999887644332221111100 0
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEE
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKI 151 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I 151 (167)
.+. + .....-.+++-....++|+||+++||||+|
T Consensus 159 ~l~-~--vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v 192 (267)
T 3oc7_A 159 LLP-K--LSARAAARYYLTGEKFDARRAEEIGLITMA 192 (267)
T ss_dssp HTT-T--SCHHHHHHHHHHCCCBCHHHHHHHTSSSEE
T ss_pred HHH-H--hCHHHHHHHHHcCCccCHHHHHHCCChhhh
Confidence 011 1 233344555556778999999999999999
No 54
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=98.12 E-value=1e-05 Score=65.86 Aligned_cols=97 Identities=10% Similarity=0.017 Sum_probs=69.1
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-+ -+
T Consensus 98 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L-------~r------- 161 (272)
T 3qk8_A 98 DLVLNLVNLDKPVVSAIRGPAVGAGLVVALLA--DISVASATAKIIDGHTKLGVAAGDHAAICW-------PL------- 161 (272)
T ss_dssp HHHHHHHTCCSCEEEEECSEEEHHHHHHHHHS--SEEEEETTCEEECCHHHHTSCSCSSHHHHT-------HH-------
T ss_pred HHHHHHHhCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECchhccCCCCCccHHHHH-------HH-------
Confidence 46777889999999999999999999999999 5799999998877443332221 111111 00
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.. ....-.+++-....++|+||+++||||+|.+..
T Consensus 162 ----~v--G~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~ 196 (272)
T 3qk8_A 162 ----LV--GMAKAKYYLLTCETLSGEEAERIGLVSTCVDDD 196 (272)
T ss_dssp ----HH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGG
T ss_pred ----Hh--CHHHHHHHHHcCCCCCHHHHHHCCCCcEeeCHh
Confidence 11 122233445557789999999999999998753
No 55
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.12 E-value=1.8e-05 Score=64.00 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=70.7
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-. -.. .|-
T Consensus 85 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g-~~~----~l~--------- 148 (258)
T 4fzw_A 85 PQLWARLQAFNKPLIAAVNGYALGAGCELALLC--DVVVAGENARFGLPEITLGIMPGAG-GTQ----RLI--------- 148 (258)
T ss_dssp HHHHHHHHTCCSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCGGGGTCCCCSS-HHH----HHH---------
T ss_pred HHHHHHHHHCCCCEEEEEcCcceeeeeEeeccc--ceEEECCCCEEECcccCCCcCCCch-HHH----HHH---------
Confidence 467888999999999999999999999999999 5799999999877444433221111 100 010
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.. ....-.+++-....++++||+++||||+|+++.
T Consensus 149 --r~v--G~~~A~~llltg~~i~a~eA~~~GLv~~vv~~~ 184 (258)
T 4fzw_A 149 --RSV--GKSLASKMVLSGESITAQQAQQAGLVSDVFPSD 184 (258)
T ss_dssp --HHH--CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred --HHh--CHHHHHHHHHcCCcCcHHHHHHCCCeeEEeCch
Confidence 111 122234445557789999999999999999764
No 56
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.12 E-value=1.9e-05 Score=64.42 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=69.6
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|.-|+++| +-|++.++++|.+-...++..-+-. -. ..|-+
T Consensus 102 ~l~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g-~~----~~L~r--------- 165 (274)
T 4fzw_C 102 PLVRRLAKLPKPVICAVNGVAAGAGATLALGG--DIVIAARSAKFVMAFSKLGLIPDCG-GT----WLLPR--------- 165 (274)
T ss_dssp HHHHHHHHCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECCGGGTTCCCTTT-HH----HHHHH---------
T ss_pred HHHHHHHHCCCCEEEEECCceeecCceeeecc--ceEEECCCCEEECcccCcccCCCcc-HH----HHHHH---------
Confidence 57778889999999999999999999999999 5799999999877544433221111 00 01111
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.. ....-.+++-....++|+||+++||||+|.++.
T Consensus 166 --~v--G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 200 (274)
T 4fzw_C 166 --VA--GRARAMGLALLGNQLSAEQAHEWGMIWQVVDDE 200 (274)
T ss_dssp --HT--CHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGG
T ss_pred --Hh--hHHHHHHHHHhCCcCCHHHHHHCCCceEEeChH
Confidence 11 122233444456789999999999999998753
No 57
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=98.12 E-value=1.1e-05 Score=67.54 Aligned_cols=96 Identities=9% Similarity=-0.008 Sum_probs=70.5
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|+-|+++| +-|++.++++|.+-...++..-+.. . +
T Consensus 147 ~~~~~~l~~~~kPvIAaV~G~a~GgG~~Lalac--D~rias~~a~f~~pe~~lG~~P~~g--~------l---------- 206 (333)
T 3njd_A 147 VRGFASLMHCDKPTVVKIHGYCVAGGTDIALHA--DQVIAAADAKIGYPPMRVWGVPAAG--L------W---------- 206 (333)
T ss_dssp HHHHTHHHHSSSCEEEEECSEEETHHHHHHTTS--SEEEECTTCEEECGGGGTTCCCTTC--C------H----------
T ss_pred HHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhC--CEEEECCCCeeechhhceeccCHHH--H------H----------
Confidence 345677888999999999999999999999999 5799999998877443322221111 0 1
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+.. ......+++-....++|+||+++||||+|++.
T Consensus 207 -~~~v--G~~~A~ellltG~~i~A~eA~~~GLV~~vv~~ 242 (333)
T 3njd_A 207 -AHRL--GDQRAKRLLFTGDCITGAQAAEWGLAVEAPDP 242 (333)
T ss_dssp -HHHH--CHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCG
T ss_pred -HHHH--HHHHHHHHHhcCCCCCHHHHHHCCCccEecCh
Confidence 1112 23445566777888999999999999999865
No 58
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=98.10 E-value=2.3e-05 Score=63.34 Aligned_cols=98 Identities=10% Similarity=0.049 Sum_probs=67.6
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceee-ecccccCCcCChhHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL-YLPVVGRSSGPVTDMWRKAKDLEANAESYIE 114 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~mi-H~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~ 114 (167)
..++..|..++.||.+.+.|.|.+ |.-++++| +-|++.++++|.+ -...++..-+-..- .
T Consensus 98 ~~~~~~l~~~~kPvIAav~G~a~G-G~~Lalac--D~ria~~~a~f~~~pe~~lGl~p~~g~~-----~----------- 158 (257)
T 1szo_A 98 QRLLNNLLSIEVPVIAAVNGPVTN-APEIPVMS--DIVLAAESATFQDGPHFPSGIVPGDGAH-----V----------- 158 (257)
T ss_dssp HHHHHHHHHCCSCEEEEECSCBCS-STHHHHTS--SEEEEETTCEEECTTSGGGTCCCTTTHH-----H-----------
T ss_pred HHHHHHHHcCCCcEEEEECCchHH-HHHHHHHC--CEEEEeCCCEEecCcccccccCCCccHH-----H-----------
Confidence 456778889999999999999994 88888888 5899999998876 33332221111100 0
Q ss_pred HHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 115 LLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 115 ~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+.+..| ...-.+++-....++++||+++||||+|+++
T Consensus 159 ~l~r~vG--~~~A~~llltG~~~~A~eA~~~GLv~~vv~~ 196 (257)
T 1szo_A 159 VWPHVLG--SNRGRYFLLTGQELDARTALDYGAVNEVLSE 196 (257)
T ss_dssp HHHHHHC--HHHHHHHHHTTCEEEHHHHHHHTSCSEEECH
T ss_pred HHHHHcC--HHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 0111122 2334556666788999999999999999854
No 59
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=98.09 E-value=1.3e-05 Score=65.66 Aligned_cols=95 Identities=17% Similarity=0.149 Sum_probs=68.2
Q ss_pred HHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHHHH
Q 031001 39 ADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 39 ~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
+..|..++.||.+.+.|.|.+.|.-|+++| +-|++.++++|.+-...++..- |-..-+
T Consensus 108 ~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~p~~g~~~~L------------------ 167 (278)
T 3h81_A 108 WGKLAAVRTPTIAAVAGYALGGGCELAMMC--DVLIAADTAKFGQPEIKLGVLPGMGGSQRL------------------ 167 (278)
T ss_dssp GHHHHTCCSCEEEEECBEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSHHHHH------------------
T ss_pred HHHHHhCCCCEEEEECCeeehHHHHHHHHC--CEEEEcCCCEEECchhhcCcCCCccHHHHH------------------
Confidence 567888999999999999999999999999 5799999998877544433221 211111
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++|+||+++||||+|++..
T Consensus 168 ~r~vG--~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~ 204 (278)
T 3h81_A 168 TRAIG--KAKAMDLILTGRTMDAAEAERSGLVSRVVPAD 204 (278)
T ss_dssp HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred HHHhC--HHHHHHHHHhCCCcCHHHHHHCCCccEEeChh
Confidence 11111 22334445556779999999999999998754
No 60
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=98.07 E-value=2.3e-05 Score=63.56 Aligned_cols=97 Identities=11% Similarity=0.098 Sum_probs=67.5
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+ .+ .
T Consensus 90 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~c--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l-------~~---~-- 155 (269)
T 1nzy_A 90 HQMIHKIIRVKRPVLAAINGVAAGGGLGISLAS--DMAICADSAKFVCAWHTIGIGNDTATSYSL-------AR---I-- 155 (269)
T ss_dssp HHHHHHHHHCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCTTHHHHH-------HH---H--
T ss_pred HHHHHHHHhCCCCEEEEECCeeecHHHHHHHhC--CEEEecCCCEEeCcccccCCCCCccHHHHH-------HH---H--
Confidence 456677889999999999999999999999999 5799999998876443322211 111111 11 0
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.| ...-.+++-....++++||+++||||+|.++
T Consensus 156 ------vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 188 (269)
T 1nzy_A 156 ------VG--MRRAMELMLTNRTLYPEEAKDWGLVSRVYPK 188 (269)
T ss_dssp ------HH--HHHHHHHHHHCCCBCHHHHHHHTSCSCEECH
T ss_pred ------hh--HHHHHHHHHcCCCCCHHHHHHCCCccEeeCH
Confidence 01 1122334445667999999999999999864
No 61
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=98.07 E-value=1.9e-05 Score=64.84 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=69.4
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeec-CCceeeecccccCCc--CChhHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQP-NSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p-~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~ 112 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.+ +++|.+-...++..- |-..-+
T Consensus 96 ~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalac--D~ria~~~~a~f~~pe~~lGl~p~~g~~~~L-------------- 159 (287)
T 3gkb_A 96 QAVGELIRHQPQVTIVKLAGKARGGGAEFVAAA--DMAFAAAETAGLGQIEALMGIIPGGGGTQYL-------------- 159 (287)
T ss_dssp HHHHHHHHHCSSEEEEEECSEEETHHHHHHHHS--SEEEEETTTCEEECGGGGGTSCCCSSHHHHH--------------
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHHHHHHHHC--CEEEEeCCCcEEECcccccCCCCCchHHHHH--------------
Confidence 357788999999999999999999999999999 5799999 998877443332221 111111
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+..| ...-.+++-....++|+||+++||||+|+++
T Consensus 160 ----~r~vG--~~~A~ellltG~~i~A~eA~~~GLV~~vv~~ 195 (287)
T 3gkb_A 160 ----RGRVG--RNRALEVVLTADLFDAETAASYGWINRALPA 195 (287)
T ss_dssp ----HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECH
T ss_pred ----HHHhC--HHHHHHHHHcCCCCCHHHHHHCCCCcEEeCh
Confidence 11111 2223444555677999999999999999865
No 62
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=98.06 E-value=1.1e-05 Score=65.27 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=67.8
Q ss_pred HHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCC--cCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 39 ADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 39 ~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~--~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
+..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+....++.. .|-..-+
T Consensus 90 ~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------ 149 (260)
T 1mj3_A 90 WDHITRIKKPVIAAVNGYALGGGCELAMMC--DIIYAGEKAQFGQPEILLGTIPGAGGTQRL------------------ 149 (260)
T ss_dssp GGGGGGCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSTTTHH------------------
T ss_pred HHHHHhCCCCEEEEECCEEEeHHHHHHHhC--CEEEEcCCCEEeCcccccCCCCCccHHHHH------------------
Confidence 456677889999999999999999999999 579999999988765543322 1222111
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++|+||+++||||+|.+..
T Consensus 150 ~r~vG--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 186 (260)
T 1mj3_A 150 TRAVG--KSLAMEMVLTGDRISAQDAKQAGLVSKIFPVE 186 (260)
T ss_dssp HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred HHHhC--HHHHHHHHHcCCcCCHHHHHHcCCccEEeChH
Confidence 11111 22334445556788999999999999998763
No 63
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=98.05 E-value=1.5e-05 Score=64.50 Aligned_cols=96 Identities=16% Similarity=0.189 Sum_probs=69.2
Q ss_pred HHHHH-h--hcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHH
Q 031001 38 IADAM-A--YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 38 I~~~i-~--~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~ 112 (167)
++..| . .++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+
T Consensus 91 ~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l-------------- 154 (265)
T 3rsi_A 91 IGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQT--DIRVSDEHATFGLPEVQRGLVPGAGSMVRL-------------- 154 (265)
T ss_dssp HHHHTTSSCCCSSCEEEEECSCEETHHHHHHTTC--SEEEEETTCEEECGGGGGTCCCTTTHHHHH--------------
T ss_pred HHHHHHHhcCCCCCEEEEECCeeeHHHHHHHHHC--CEEEecCCCEEECchhccCCCCCccHHHHH--------------
Confidence 77778 7 8899999999999999999999999 5799999998876444332221 111111
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+.. ....-.+++-....++|+||+++||||+|++..
T Consensus 155 ----~~~v--G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3rsi_A 155 ----KRQI--PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAG 191 (265)
T ss_dssp ----HHHS--CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTT
T ss_pred ----HHHh--CHHHHHHHHHcCCCCCHHHHHHCCCccEecChh
Confidence 1111 223334455567789999999999999999764
No 64
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=98.04 E-value=1.7e-05 Score=64.79 Aligned_cols=95 Identities=19% Similarity=0.129 Sum_probs=68.4
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-
T Consensus 112 ~~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~---------------- 173 (276)
T 3rrv_A 112 REIVLGMARCRIPVVAAVNGPAVGLGCSLVALS--DIVYIAENAYLADPHVQVGLVAADGGPLT---------------- 173 (276)
T ss_dssp HHHHHHHHHCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECCHHHHTCCCCSSHHHH----------------
T ss_pred HHHHHHHHhCCCCEEEEECceeeHHHHHHHHHC--CEEEEeCCCEEECchhccCcCCCccHHHH----------------
Confidence 456778889999999999999999999999999 5799999998776333322111 11110
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEe
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~ 152 (167)
+.+.. ....-.+++-....++|+||+++||||+|.
T Consensus 174 --L~r~v--G~~~A~ellltG~~i~A~eA~~~GLv~~vv 208 (276)
T 3rrv_A 174 --WPLHI--SLLLAKEYALTGTRISAQRAVELGLANHVA 208 (276)
T ss_dssp --GGGTS--CHHHHHHHHHHCCCEEHHHHHHHTSCSEEE
T ss_pred --HHHHh--CHHHHHHHHHcCCCCCHHHHHHcCCHHHHH
Confidence 11111 233344555567889999999999999998
No 65
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=98.04 E-value=1.5e-05 Score=65.50 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=69.8
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc-C-ChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS-G-PVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~-G-~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-.+.++... + -..-+.
T Consensus 113 ~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~-------------- 176 (289)
T 3t89_A 113 LDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMC--DLTIAADNAIFGQTGPKVGSFDGGWGASYMA-------------- 176 (289)
T ss_dssp HHHHHHHHHCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCSTTTHHHH--------------
T ss_pred HHHHHHHHcCCCCEEEEECCEeehHHHHHHHhC--CEEEEeCCCEEeccccccCCCCCchHHHHHH--------------
Confidence 457788999999999999999999999999999 5799999999877544433111 1 111111
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.. ....-.+++-....++|+||+++||||+|++..
T Consensus 177 ----r~v--G~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~ 212 (289)
T 3t89_A 177 ----RIV--GQKKAREIWFLCRQYDAKQALDMGLVNTVVPLA 212 (289)
T ss_dssp ----HHH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGG
T ss_pred ----Hhc--CHHHHHHHHHcCCcccHHHHHHCCCceEeeCHH
Confidence 111 122233444456679999999999999998753
No 66
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=98.01 E-value=4e-06 Score=67.84 Aligned_cols=95 Identities=15% Similarity=0.078 Sum_probs=66.4
Q ss_pred HHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHHHH
Q 031001 39 ADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 39 ~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
...+..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+....++..- |-..-+
T Consensus 85 ~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L------------------ 144 (256)
T 3pe8_A 85 SPKWPDMTKPVIGAINGAAVTGGLELALYC--DILIASENAKFADTHARVGLMPTWGLSVRL------------------ 144 (256)
T ss_dssp CCCCCCCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCSSHHHHH------------------
T ss_pred HHHHHhCCCCEEEEECCeeechHHHHHHhC--CEEEEcCCCEEECchhhhCCCCcccHHHHH------------------
Confidence 345667889999999999999999999999 5799999999877443332221 211111
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++++||+++||||+|++..
T Consensus 145 ~r~vG--~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 181 (256)
T 3pe8_A 145 PQKVG--VGLARRMSLTGDYLSAQDALRAGLVTEVVAHD 181 (256)
T ss_dssp HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSCEECGG
T ss_pred HHhcC--HHHHHHHHHcCCCCCHHHHHHCCCCeEEeCHh
Confidence 11111 22333445556779999999999999998753
No 67
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=97.99 E-value=1.5e-05 Score=65.01 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=69.6
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-.+.++... |-..-+ -+
T Consensus 99 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L-------~r------ 163 (275)
T 4eml_A 99 LDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVC--DLTIAADNAIFGQTGPKVGSFDGGFGSSYL-------AR------ 163 (275)
T ss_dssp HHHHHHHHHSSSEEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECCHHHHTCCCCSTTTHHH-------HH------
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECcccccCCCCCccHHHHH-------HH------
Confidence 467788999999999999999999999999999 5799999998877443333111 111111 11
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
..| ...-.+++-....++|+||+++||||+|.+..
T Consensus 164 -----~vG--~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 198 (275)
T 4eml_A 164 -----IVG--QKKAREIWYLCRQYSAQEAERMGMVNTVVPVD 198 (275)
T ss_dssp -----HHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred -----HhH--HHHHHHHHHhCCCcCHHHHHHcCCccEeeCHH
Confidence 111 12223444456679999999999999998753
No 68
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=97.97 E-value=3.8e-05 Score=64.55 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=69.5
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeee-cCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQ-PNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~-p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
.++..|+.++.||.+.+.|.|.+.|.-|+++| +-|++. ++++|.+-...++..- |-..-+. +.+-
T Consensus 158 ~~~~~i~~~~kPvIAaV~G~A~GgG~~Lalac--D~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~---r~vG------- 225 (334)
T 3t8b_A 158 EVQRLIRFMPKVVICLVNGWAAGGGHSLHVVC--DLTLASREYARFKQTDADVGSFDGGYGSAYLA---RQVG------- 225 (334)
T ss_dssp HHHHHHHHSSSEEEEEECSEEETHHHHHHHHS--SEEEEETTTCEEECCCTTCSSSSCCSCHHHHH---HHHH-------
T ss_pred HHHHHHHhCCCCEEEEECCccccCcchhHhhC--CEEEEeCCCcEEECcccccCCCCcccHHHHHH---HHhh-------
Confidence 56778999999999999999999999999999 579999 9999887555443221 2222221 1010
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.....+++-....++|+||+++||||+|++..
T Consensus 226 ----------~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~ 257 (334)
T 3t8b_A 226 ----------QKFAREIFFLGRTYTAEQMHQMGAVNAVAEHA 257 (334)
T ss_dssp ----------HHHHHHHHHHCCEEEHHHHHHHTSCSEEECGG
T ss_pred ----------HHHHHHHHHhCCcCCHHHHHHCCCCcEecCHH
Confidence 11223344446779999999999999998753
No 69
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=97.97 E-value=1.1e-05 Score=65.76 Aligned_cols=96 Identities=15% Similarity=0.093 Sum_probs=66.2
Q ss_pred HHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHH
Q 031001 39 ADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAK 118 (167)
Q Consensus 39 ~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~ 118 (167)
+..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-. -. . .+.+
T Consensus 99 ~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g-~~----~-----------~l~r 160 (276)
T 2j5i_A 99 WKLLRMYAKPTIAMVNGWCFGGGFSPLVAC--DLAICADEATFGLSEINWGIPPGNL-VS----K-----------AMAD 160 (276)
T ss_dssp TTTTTTCSSCEEEEECSCEEGGGHHHHHHS--SEEEEETTCEEECGGGGGTCCCCTT-HH----H-----------HHHH
T ss_pred HHHHHhCCCCEEEEECCeeehhHHHHHHhC--CEEEEcCCCEEeCcccccCCCCcch-HH----H-----------HHHH
Confidence 344567789999999999999999999999 5799999998876444332211110 00 0 0111
Q ss_pred HhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 119 GTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 119 ~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
..| ...-.+++-....++|+||+++||||+|.+.
T Consensus 161 ~vG--~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 194 (276)
T 2j5i_A 161 TVG--HRQSLMYIMTGKTFGGQKAAEMGLVNESVPL 194 (276)
T ss_dssp HSC--HHHHHHHHHHCCEEEHHHHHHHTSSSEEECH
T ss_pred HhC--HHHHHHHHHhCCcccHHHHHHcCCccEeeCH
Confidence 222 2334455556778999999999999999864
No 70
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=97.94 E-value=3.5e-05 Score=62.39 Aligned_cols=97 Identities=16% Similarity=0.099 Sum_probs=67.1
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-+. +.+
T Consensus 88 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~---r~v-------- 154 (265)
T 3qxz_A 88 SPVQPAAFELRTPVIAAVNGHAIGIGMTLALHA--DIRILAEEGRYAIPQVRFGVAPDALAHWTLP---RLV-------- 154 (265)
T ss_dssp CCSSSCGGGSSSCEEEEECSEEETHHHHHHTTS--SEEEEETTCCEECCGGGGTSCCCTTHHHHTH---HHH--------
T ss_pred HHHHHHHHhCCCCEEEEECCEEehHhHHHHHHC--CEEEEcCCCEEECcccccCcCCCccHHHHHH---HHh--------
Confidence 345667889999999999999999999999999 5799999998877444433221 1111111 000
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
| ...-.+++-....++|+||+++||||+|++.
T Consensus 155 -------G--~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~ 186 (265)
T 3qxz_A 155 -------G--TAVAAELLLTGASFSAQRAVETGLANRCLPA 186 (265)
T ss_dssp -------H--HHHHHHHHHHCCCBCHHHHHHHTSCSEEECH
T ss_pred -------C--HHHHHHHHHcCCCcCHHHHHHCCCccEeeCH
Confidence 0 1112333444567899999999999999865
No 71
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=97.94 E-value=6e-05 Score=62.34 Aligned_cols=91 Identities=11% Similarity=0.042 Sum_probs=62.8
Q ss_pred cCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 031001 45 CKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPK 124 (167)
Q Consensus 45 ~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~ 124 (167)
++.||.+.+.|.|.+.|+-++++| +-|++.++++|.+-...++..-+-.. . . .+.+.. ..
T Consensus 139 ~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~-~----~-----------~L~r~v--G~ 198 (305)
T 3m6n_A 139 ARAHSIALVQGNALGGGFEAALSC--HTIIAEEGVMMGLPEVLFDLFPGMGA-Y----S-----------FMCQRI--SA 198 (305)
T ss_dssp TTCEEEEEECSCEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSH-H----H-----------HHTTTS--CH
T ss_pred CCCCEEEEECCEeehHHHHHHHhC--CEEEEcCCCEEECchhccCcCCCccH-H----H-----------HHHHHh--cH
Confidence 589999999999999999999999 57999999988774433322111100 0 0 111111 22
Q ss_pred HHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 125 EEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 125 ~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
..-.+++-....++|+||+++||||+|+++.
T Consensus 199 ~~A~~llltG~~i~A~eA~~~GLv~~vv~~~ 229 (305)
T 3m6n_A 199 HLAQKIMLEGNLYSAEQLLGMGLVDRVVPRG 229 (305)
T ss_dssp HHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCCEecChh
Confidence 3334455556789999999999999999763
No 72
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=97.91 E-value=1.5e-05 Score=65.92 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=67.2
Q ss_pred HHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCC--cCChhHHHHHHHHHHHHHHHHHHH
Q 031001 38 IADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 38 I~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~--~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. .|-..-
T Consensus 122 ~~~~l~~~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~------------------ 181 (298)
T 3qre_A 122 PPHFVTMLRKPVIAAINGPCVGIGLTQALMC--DVRFAAAGAKFAAVFARRGLIAEFGISWI------------------ 181 (298)
T ss_dssp CTTGGGGSSSCEEEEECSCEETHHHHHHHHS--SEEEEETTCEEECCCCHHHHHCTTSHHHH------------------
T ss_pred HHHHHHhCCCCEEEEECCceeecchHHHhhC--CEEEEcCCCEEECcccccCCCcchhHHHH------------------
Confidence 3456778899999999999999999999999 579999999887633322211 111111
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.+..| ...-.+++-....++|+||+++||||+|++..
T Consensus 182 L~r~vG--~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~ 219 (298)
T 3qre_A 182 LPRLTS--WAVALDLLLSGRTFLAEEAAQLGLVKEVVTPE 219 (298)
T ss_dssp HHHHSC--HHHHHHHHHHCCEEEHHHHHHTTSCSEEECGG
T ss_pred HHHhcC--HHHHHHHHHcCCCCCHHHHHHcCCCeEecCHH
Confidence 111122 23344555567789999999999999998653
No 73
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=97.90 E-value=4.9e-05 Score=61.47 Aligned_cols=97 Identities=8% Similarity=-0.055 Sum_probs=68.2
Q ss_pred HHHH-hhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHH
Q 031001 39 ADAM-AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLA 117 (167)
Q Consensus 39 ~~~i-~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a 117 (167)
+..| ..++.||.+.+.|.|.+.|+-++++| +-|++.++++|.+-...++..-+-..-. .| .
T Consensus 94 ~~~l~~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~-----~l-----------~ 155 (265)
T 3swx_A 94 WQVDGRQLSKPLLVAVHGKVLTLGIELALAA--DIVIADETATFAQLEVNRGIYPFGGATI-----RF-----------P 155 (265)
T ss_dssp TCCSSCCCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTSCCCSSHHH-----HH-----------H
T ss_pred HHHHHHhCCCCEEEEEcCeeehHHHHHHHHC--CEEEEcCCCEEECcccccccCCCccHHH-----HH-----------H
Confidence 3445 67789999999999999999999999 5799999998877444433221111000 01 1
Q ss_pred HHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 118 KGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 118 ~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.. ....-.+++-....++|+||+++||||+|+++.
T Consensus 156 r~v--G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3swx_A 156 RTA--GWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVG 191 (265)
T ss_dssp HHH--CHHHHHHHHTTCCCEEHHHHHHTTSCSEEESTT
T ss_pred HHh--hHHHHHHHHHcCCcCCHHHHHHcCCCCEecChh
Confidence 111 223345566778899999999999999999764
No 74
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=97.90 E-value=2.8e-05 Score=63.94 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=68.5
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecC-CceeeecccccCCc--CChhHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN-SSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~-s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~ 112 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++ ++|.+-...++..- |-..-+
T Consensus 93 ~~~~~~l~~~~kPvIAaV~G~a~GgG~~Lalac--D~ria~~~~a~f~~pe~~lGl~p~~g~~~~L-------------- 156 (289)
T 3h0u_A 93 GMLFRKLSQLPAVTIAKLRGRARGAGSEFLLAC--DMRFASRENAILGQPEVGIGAPPGAGAIQHL-------------- 156 (289)
T ss_dssp HHHHHHHHTCSSEEEEEECSEEETHHHHHHHHS--SEEEEETTTCEEECTHHHHTSCCCSSHHHHH--------------
T ss_pred HHHHHHHHhCCCCEEEEECCEeehhhHHHHHhC--CEEEEeCCCcEEeCchhhcCCCCCccHHHHH--------------
Confidence 457788999999999999999999999999999 57999998 98776333322211 111111
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+..| ...-.+++-....++|+||+++||||+|+++
T Consensus 157 ----~r~vG--~~~A~ellltG~~i~A~eA~~~GLV~~vv~~ 192 (289)
T 3h0u_A 157 ----TRLLG--RGRALEAVLTSSDFDADLAERYGWVNRAVPD 192 (289)
T ss_dssp ----HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSSSEEECH
T ss_pred ----HHHhC--HHHHHHHHHcCCCCCHHHHHHCCCccEecCH
Confidence 11111 2223444545677999999999999999864
No 75
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=97.89 E-value=5.3e-05 Score=61.06 Aligned_cols=95 Identities=9% Similarity=0.057 Sum_probs=67.8
Q ss_pred HHHH-hhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCC--cCChhHHHHHHHHHHHHHHHHHHH
Q 031001 39 ADAM-AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRS--SGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 39 ~~~i-~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~--~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
+..| ..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++.. .|-..-+.
T Consensus 97 ~~~l~~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~---------------- 158 (258)
T 3lao_A 97 WGVVQPRRSKPLVVAVQGTCWTAGIELMLNA--DIAVAARGTRFAHLEVLRGIPPLGGSTVRFP---------------- 158 (258)
T ss_dssp TSCSSSCCCSCEEEEECSEEETHHHHHHHTS--SEEEEETTCEEECGGGGTCCCSSCCCCSHHH----------------
T ss_pred HHHHHHhCCCCEEEEECCEeEhHHHHHHHhC--CEEEEcCCCEEeCcccccCCCCCccHHHHHH----------------
Confidence 4556 77889999999999999999999999 579999999887744433221 12222111
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+.. ....-.+++-....++|+||+++||||+|.++.
T Consensus 159 --r~v--G~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 194 (258)
T 3lao_A 159 --RAA--GWTDAMRYILTGDEFDADEALRMRLLTEVVEPG 194 (258)
T ss_dssp --HHH--CHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTT
T ss_pred --HHh--CHHHHHHHHHcCCCCCHHHHHHcCCCcEeeChh
Confidence 111 122334556667789999999999999999764
No 76
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=97.87 E-value=3.2e-05 Score=63.16 Aligned_cols=97 Identities=7% Similarity=-0.042 Sum_probs=67.5
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++. .|...-.. .+
T Consensus 108 ~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl-~~~~~~~~--~~------------- 169 (279)
T 3t3w_A 108 EYSLRWRNVPKPSIAAVQGRCISGGLLLCWPC--DLIIAAEDALFSDPVVLMDI-GGVEYHGH--TW------------- 169 (279)
T ss_dssp HHHHHHHHCSSCEEEEECSEEEGGGHHHHTTS--SEEEEETTCEEECCGGGGTC-SSCSSCCH--HH-------------
T ss_pred HHHHHHHhCCCCEEEEECCeEhHHHHHHHHhC--CEEEecCCCEEeCcHHhcCC-CCchHHHH--Hh-------------
Confidence 45677889999999999999999999999999 57999999988764433322 11100000 00
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.. ....-.+++-....++|+||+++||||+|.++.
T Consensus 170 --~v--G~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~ 204 (279)
T 3t3w_A 170 --EL--GPRKAKEILFTGRAMTAEEVAQTGMVNRVVPRD 204 (279)
T ss_dssp --HH--CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred --hc--CHHHHHHHHHcCCccCHHHHHHCCCCcEeeChH
Confidence 01 122233444456689999999999999998653
No 77
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=97.87 E-value=5.1e-05 Score=64.24 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=68.8
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|.-|+++| +-|++.++++|.+-...++..-+-..- .. +
T Consensus 93 ~~~~~l~~~~kPvIAav~G~a~GgG~~Lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~-----~~-----------L 154 (363)
T 3bpt_A 93 MLNNAVGSCQKPYVALIHGITMGGGVGLSVHG--QFRVATEKCLFAMPETAIGLFPDVGGG-----YF-----------L 154 (363)
T ss_dssp HHHHHHHTCSSCEEEEECSEEETHHHHTTTTS--SEEEECTTCEEECCGGGTTSCCCTTHH-----HH-----------H
T ss_pred HHHHHHHhCCCCEEEEECCEEehHHHHHHHhC--CEEEEcCCeEEeCCccccCCCCCchHH-----HH-----------H
Confidence 45567889999999999999999999999999 579999999887754443322111100 00 1
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+.-|. .-.+++-....++|+||+++||||+|+++.
T Consensus 155 ~r~~g~---~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 190 (363)
T 3bpt_A 155 PRLQGK---LGYFLALTGFRLKGRDVYRAGIATHFVDSE 190 (363)
T ss_dssp HHSSTT---HHHHHHHHCCCEETHHHHHTTSCSEECCGG
T ss_pred HHhhHH---HHHHHHHcCCCCCHHHHHHCCCcceecCHH
Confidence 111231 233445557789999999999999998654
No 78
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=97.85 E-value=7.9e-05 Score=62.92 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=67.7
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-..- ..|.+
T Consensus 95 ~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~c--D~ria~~~a~f~~pe~~iGl~p~~g~~-----~~l~r-------- 159 (353)
T 4hdt_A 95 YRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHG--NVRVVTDTTKMAMPEVGIGFIPDVGGT-----YLLSR-------- 159 (353)
T ss_dssp HHHHHHHHHCSSCEEEEECBEEETHHHHHHTTS--SEEEECTTCEEECCGGGGTCCCCTTHH-----HHHHT--------
T ss_pred HHHHHHHHHCCCCEEEEeECceeecCccccCCc--CeeccchhccccCcccccccCCCccce-----ehhhh--------
Confidence 457778899999999999999999999999999 579999999887743332221111100 00111
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.-| . .-.+++-....++|+||+++||||+|+++.
T Consensus 160 ---l~g-~--~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 193 (353)
T 4hdt_A 160 ---APG-K--LGLHAALTGAPFSGADAIVMGFADHYVPHD 193 (353)
T ss_dssp ---SST-T--HHHHHHHHCCCBCHHHHHHHTSCSEECCGG
T ss_pred ---hhh-H--HHHHHHhcCCCCCHHHHHHcCCCcEEeCHH
Confidence 111 1 112233345679999999999999998764
No 79
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=97.84 E-value=5e-05 Score=61.84 Aligned_cols=95 Identities=15% Similarity=0.117 Sum_probs=66.7
Q ss_pred HHHHh---hcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 39 ADAMA---YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 39 ~~~i~---~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
++.|. .++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |...-+
T Consensus 105 ~~~l~~~~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L--------------- 167 (278)
T 4f47_A 105 IDALLKGRRLKKPLIAAVEGPAIAGGTEILQGT--DIRVAAESAKFGISEAKWSLYPMGGSAVRL--------------- 167 (278)
T ss_dssp BTTTTBSCCCSSCEEEEECSEEETHHHHHHTTC--SEEEEETTCEEECCGGGGTCCCTTSHHHHH---------------
T ss_pred HHHHHHhcCCCCCEEEEECCEEehHHHHHHHhC--CEEEEcCCCEEECcccccCCCCCccHHHHH---------------
Confidence 34455 7889999999999999999999999 5799999998876444332221 111111
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+.. ....-.+++-....++++||+++||||+|.+..
T Consensus 168 ---~r~v--G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 204 (278)
T 4f47_A 168 ---VRQI--PYTVACDLLLTGRHITAAEAKEMGLVGHVVPDG 204 (278)
T ss_dssp ---HHHS--CHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred ---HHHh--CHHHHHHHHHcCCcCCHHHHHHCCCceEeeChh
Confidence 1111 223334455556788999999999999999764
No 80
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=97.84 E-value=0.00011 Score=65.53 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=69.9
Q ss_pred HHHHHH----hhcCCCeEEEEccccccHHHHHHhcCCCCceeeecC--Cceeeeccc-ccCCc--CChhHHHHHHHHHHH
Q 031001 37 AIADAM----AYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN--SSTKLYLPV-VGRSS--GPVTDMWRKAKDLEA 107 (167)
Q Consensus 37 aI~~~i----~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~--s~~miH~p~-~~~~~--G~~~dl~~~~~~l~~ 107 (167)
.++..| ..++.||.+.+.|.|.+.|.-++++| +.|++.++ +.|.+-... ++-.- |-..-
T Consensus 116 ~l~~~L~~a~~~~pKPVIAAVnG~AlGGGleLALAC--D~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~r---------- 183 (556)
T 2w3p_A 116 ETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALAC--DEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTR---------- 183 (556)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHHHS--SEEEEECSSSCEEECCHHHHHSSCCTTTHHHH----------
T ss_pred HHHHHHHHHHhcCCCCEEEEECCeechhhHHHHHhC--CEEEEcCCCCcEEecccccccCCCCCccHHHH----------
Confidence 456677 88899999999999999999999999 57999999 887763322 22111 11111
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 108 NAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 108 ~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+..+.-.....-.+++-....++++||+++||||+|+++
T Consensus 184 --------Lp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~ 222 (556)
T 2w3p_A 184 --------VTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKP 222 (556)
T ss_dssp --------HHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECH
T ss_pred --------HHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 110011234555667777888999999999999999853
No 81
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=97.82 E-value=6.6e-05 Score=60.51 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=64.5
Q ss_pred hcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 031001 44 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 123 (167)
Q Consensus 44 ~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~ 123 (167)
.++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-..- ..| .+.. .
T Consensus 91 ~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p~~g~~-----~~l-----------~r~v--G 150 (256)
T 3trr_A 91 PPRKPIIAAVEGFALAGGTELVLSC--DLVVAGRSAKFGIPEVKRGLVAGAGGL-----LRL-----------PNRI--P 150 (256)
T ss_dssp CCSSCEEEEECSBCCTHHHHHHHTS--SEEEEETTCEECCCGGGGTCCCCSSHH-----HHH-----------HHHS--C
T ss_pred cCCCCEEEEECCeeeechhHHHHhC--CEEEECCCCEEEehhhccCCCCCccHH-----HHH-----------HHHh--C
Confidence 5678999999999999999999999 479999999887643332222111100 001 1112 2
Q ss_pred HHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 124 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 124 ~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.....+++-....++++||+++||||+|.+..
T Consensus 151 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 182 (256)
T 3trr_A 151 YQVAMELALTGESFTAEDAAKYGFINRLVDDG 182 (256)
T ss_dssp HHHHHHHHHHCCCEEHHHHGGGTCCSEEECTT
T ss_pred HHHHHHHHHhCCCcCHHHHHHCCCeeEecChH
Confidence 34445556667889999999999999998764
No 82
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=97.81 E-value=4e-05 Score=62.15 Aligned_cols=96 Identities=9% Similarity=-0.039 Sum_probs=65.7
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceee-ecccccCC--cCChhHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL-YLPVVGRS--SGPVTDMWRKAKDLEANAESY 112 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~mi-H~p~~~~~--~G~~~dl~~~~~~l~~~~~~~ 112 (167)
..++..|..++.||.+.+.|.|. .|.-++++| +-|++.++++|.+ -...++.. .|-..-+ .
T Consensus 107 ~~~~~~l~~~~kPvIAav~G~a~-GG~~Lalac--D~ria~~~a~f~~~pe~~lGl~p~~g~~~~L-------~------ 170 (263)
T 2j5g_A 107 KKVLQNLLDIEVPVISAVNGAAL-LHSEYILTT--DIILASENTVFQDMPHLNAGIVPGDGVHILW-------P------ 170 (263)
T ss_dssp HHHHHHHHTCCSCEEEEECSEEC-SCGGGGGGC--SEEEEETTCEECCCHHHHHTCCCCSSHHHHH-------H------
T ss_pred HHHHHHHHhCCCCEEEEECCcch-HHHHHHHhC--CEEEEcCCCEEecCcccccccCCCccHHHHH-------H------
Confidence 35677888999999999999999 588888888 5899999998865 22222211 1111111 1
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
+..| ...-.+++-....++|+||+++||||+|+++
T Consensus 171 -----r~vG--~~~A~~llltG~~~~A~eA~~~GLv~~vv~~ 205 (263)
T 2j5g_A 171 -----LALG--LYRGRYFLFTQEKLTAQQAYELNVVHEVLPQ 205 (263)
T ss_dssp -----HHHH--HHHHHHHHHTTCCEEHHHHHHTTSCSEEECG
T ss_pred -----HHcC--HHHHHHHHHcCCCCCHHHHHHCCCccEecCh
Confidence 0011 1233455556778999999999999999865
No 83
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=97.80 E-value=0.00016 Score=66.23 Aligned_cols=97 Identities=14% Similarity=0.155 Sum_probs=69.2
Q ss_pred HHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHH
Q 031001 36 YAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 36 ~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~ 113 (167)
..++..|..++.||.+.+.|.|.+.|.-++++| +.|++.++++|.+-...++-.- |-..-+
T Consensus 93 ~~~~~~l~~~~kPvIAav~G~a~GgG~elalac--D~ria~~~a~fglpev~lGl~P~~ggt~~L--------------- 155 (715)
T 1wdk_A 93 NKIFSDFEDLNVPTVAAINGIALGGGLEMCLAA--DFRVMADSAKIGLPEVKLGIYPGFGGTVRL--------------- 155 (715)
T ss_dssp HHHHHHHHTCSSCEEEEECSCEETHHHHHHHTS--SEEEEETTCEEECGGGGGTCCCCSSHHHHH---------------
T ss_pred HHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHC--CEEEEeCCCEEeChhhccCCCCCccHHHHH---------------
Confidence 456778889999999999999999999999999 5899999998776443332221 211111
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
.+..| ...-.+++-....++|+||+++||||+|.+.
T Consensus 156 ---~r~vG--~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~ 191 (715)
T 1wdk_A 156 ---PRLIG--VDNAVEWIASGKENRAEDALKVSAVDAVVTA 191 (715)
T ss_dssp ---HHHHC--HHHHHHHHHHCCCEEHHHHHHTTSSSEEECG
T ss_pred ---HHHhC--HHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence 11111 2223344555778999999999999999864
No 84
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=97.77 E-value=9.6e-05 Score=59.85 Aligned_cols=88 Identities=11% Similarity=0.062 Sum_probs=62.8
Q ss_pred CCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 031001 46 KSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAKGTGKP 123 (167)
Q Consensus 46 ~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~ 123 (167)
+.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-+ .+.. .
T Consensus 102 ~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l------------------~~~v--G 159 (265)
T 3qxi_A 102 AKPLIAAVEGYALAGGTELALAT--DLIVAARDSAFGIPEVKRGLVAGGGGLLRL------------------PERI--P 159 (265)
T ss_dssp SSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECGGGGGTCCCCSSHHHHH------------------HHHS--C
T ss_pred CCCEEEEECCceeHHHHHHHHhC--CEEEEcCCCEEECcccccCcCCcccHHHHH------------------HHHh--C
Confidence 78999999999999999999999 5799999998876444332221 111111 1111 2
Q ss_pred HHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 124 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 124 ~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
...-.+++-....++++||+++||||+|.+..
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 191 (265)
T 3qxi_A 160 YAIAMELALTGDNLSAERAHALGMVNVLAEPG 191 (265)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred HHHHHHHHHcCCCcCHHHHHHCCCccEeeChh
Confidence 33334555567889999999999999998764
No 85
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=97.75 E-value=6.4e-05 Score=64.71 Aligned_cols=98 Identities=15% Similarity=0.078 Sum_probs=68.8
Q ss_pred HHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHH
Q 031001 37 AIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELL 116 (167)
Q Consensus 37 aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~ 116 (167)
.++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-..- ..+
T Consensus 133 ~l~~~i~~~~kPvIAaVnG~a~GgG~~Lalac--D~ria~~~a~f~~pe~~lGl~P~~G~t----------------~~L 194 (407)
T 3ju1_A 133 RLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGA--SHKVVTETSRIAMPEVTIGLYPDVGGS----------------YFL 194 (407)
T ss_dssp HHHHHHHTCSSCEEEECCSEEETHHHHHHHHC--SEEEECTTCEEECGGGGGTCCSCTTHH----------------HHT
T ss_pred HHHHHHHHCCCCEEEEECCccccCcchHHhcC--CEEEEcCCCEEeChHhhcCCCCCchHH----------------HHH
Confidence 35677889999999999999999999999999 579999999887744433221111000 001
Q ss_pred HHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 117 AKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 117 a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ..-.+++-....++|+||+++||||+|+++.
T Consensus 195 ~rl~g---~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 230 (407)
T 3ju1_A 195 NRMPG---KMGLFLGLTAYHMNAADACYVGLADHYLNRD 230 (407)
T ss_dssp TTSST---THHHHHHHHCCCBCHHHHHHHTSCSEECCGG
T ss_pred hhhhH---HHHHHHHHcCCcCcHHHHHHCCCccEEcCHH
Confidence 11122 2234455567789999999999999998653
No 86
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=97.75 E-value=3.7e-05 Score=68.61 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=63.5
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcC--CCCceeeecCCceeeec
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYL 85 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag--~~~~R~~~p~s~~miH~ 85 (167)
+-||..++|+||-..+ ..|--|.+.++-.+++++.....|+.|++.|.|+|.|.+.+++. ..+..++.|++.+.+..
T Consensus 382 ~iPlv~lvDt~Gf~~G~~~E~~Gi~~~ga~~l~a~~~~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~Vmg 461 (548)
T 2bzr_A 382 NIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMG 461 (548)
T ss_dssp TCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSC
T ss_pred CCCEEEEeeccCCCCChHHHHhhHHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEEecC
Confidence 5699999999994432 33444788899999999999999999999999999988876541 13578899999988876
Q ss_pred cc
Q 031001 86 PV 87 (167)
Q Consensus 86 p~ 87 (167)
|.
T Consensus 462 pe 463 (548)
T 2bzr_A 462 AS 463 (548)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 87
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=97.74 E-value=0.0001 Score=59.80 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=64.3
Q ss_pred hcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 031001 44 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 123 (167)
Q Consensus 44 ~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~ 123 (167)
.++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..-+-.. . ..+.+.. .
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~-~---------------~~L~r~v--G 158 (267)
T 3r9t_A 99 FIDKPTIAAVNGTALGGGTELALAS--DLVVADERAQFGLPEVKRGLIAAAGG-V---------------FRIAEQL--P 158 (267)
T ss_dssp CCSSCEEEEECSEECTHHHHHHHHS--SEEEEETTCEECCGGGGTTCCCTTTH-H---------------HHHHHHS--C
T ss_pred hCCCCEEEEECCEEEhHHHHHHHhC--CEEEEcCCCEEECcccccCCCCCccH-H---------------HHHHHHc--C
Confidence 6789999999999999999999999 57999999988764433222111110 0 0111111 2
Q ss_pred HHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 124 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 124 ~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
...-.+++-....++++||+++||||+|+++.
T Consensus 159 ~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 190 (267)
T 3r9t_A 159 RKVAMRLLLTGEPLSAAAARDWGLINEVVEAG 190 (267)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEECTT
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEcChh
Confidence 23344555567889999999999999999764
No 88
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=97.74 E-value=5.8e-05 Score=61.12 Aligned_cols=93 Identities=14% Similarity=0.119 Sum_probs=64.9
Q ss_pred HHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHHHHHH
Q 031001 41 AMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIELLAK 118 (167)
Q Consensus 41 ~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~~~a~ 118 (167)
.+..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- |-..-+ - +
T Consensus 96 ~~~~~~kPvIAav~G~a~GgG~~lalac--D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L-------~-----------r 155 (262)
T 3r9q_A 96 SRLRLSKPVIAAISGHAVAGGIELALWC--DLRVVEEDAVLGVFCRRWGVPLIDGGTIRL-------P-----------R 155 (262)
T ss_dssp TTCCCSSCEEEEECSEEETHHHHHHHHS--SEEEEETTCEEECTHHHHTCCCCSSHHHHH-------H-----------H
T ss_pred HHHhCCCCEEEEECCeeehhhhHHHHhC--CEEEEeCCCEEecchhccCCCCCccHHHHH-------H-----------H
Confidence 4457889999999999999999999999 5799999998776333322211 111111 0 1
Q ss_pred HhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 119 GTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 119 ~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.. ....-.+++-....++|+||+++||||+|.+..
T Consensus 156 ~v--G~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~ 190 (262)
T 3r9q_A 156 LI--GHSRAMDLILTGRPVHANEALDIGLVNRVVARG 190 (262)
T ss_dssp HH--CHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT
T ss_pred Hh--CHHHHHHHHHcCCcCCHHHHHHcCCccEecChh
Confidence 11 122334455557789999999999999999764
No 89
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=97.73 E-value=7.2e-05 Score=67.28 Aligned_cols=131 Identities=11% Similarity=0.108 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcC--CC--CceeeecCCceee
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVG--AK--GYRGLQPNSSTKL 83 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag--~~--~~R~~~p~s~~mi 83 (167)
+-||...+|+||-..+ ..|.-|....+-.+..++...+.|+.|++.|.+.|.|.+.+++. .. +..++.|++.+.+
T Consensus 406 ~iPlv~lvDtpGf~~G~~~E~~Gi~~~gA~~~~a~a~a~vP~itvI~g~~~Ggg~~am~~~~~~~~~d~~~a~p~A~~~V 485 (587)
T 1pix_A 406 RLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAV 485 (587)
T ss_dssp TCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHTCCCCEEEEECSEEETTHHHHTTCTTCTTTEEEEEECTTCEEES
T ss_pred CCCeEEEecCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCCccHHHHHhcCcccCcccceeeeccCCeEec
Confidence 5699999999995533 44555888899999999999999999999999999998776641 11 4567888888766
Q ss_pred ecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhC-----CCccccHHHHHHcCcceEEeCCc
Q 031001 84 YLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQ-----RPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 84 H~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~-----~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
-.|. + +..+. +..++.+. ++.|.+.++..+.++ -....+|..|.+.|+||.|+++.
T Consensus 486 m~pe-g-----aa~Il-~r~~~~~~---------~~~g~~~~~~~~~~~~~~~~y~~~~~p~~aa~~g~iD~VI~p~ 546 (587)
T 1pix_A 486 MNGE-T-----AATAM-YSRRLAKD---------RKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVDMN 546 (587)
T ss_dssp SCHH-H-----HHHHH-HHHHHHHH---------HHTTCCCHHHHHHHHHHHHHHHHTTSHHHHHHHTSSSEECCTT
T ss_pred CCHH-H-----HHHHH-Hhhhhhhh---------hhcCCChHHHHHHHHHHHHHHHHhCCHHHHHhcCCCccccCHH
Confidence 5443 1 22221 11122111 111222222111111 00148899999999999999864
No 90
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=97.72 E-value=5.8e-05 Score=61.29 Aligned_cols=97 Identities=12% Similarity=0.038 Sum_probs=66.3
Q ss_pred HHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHH
Q 031001 38 IADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLA 117 (167)
Q Consensus 38 I~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a 117 (167)
++..|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++..- . -. ...+.
T Consensus 102 ~~~~l~~~~kPvIAav~G~a~GgG~~lalac--D~~ia~~~a~f~~pe~~~Gl~p--~-g~--------------~~~L~ 162 (274)
T 3tlf_A 102 GTPPFRTMAKPVLTAVNGICCGAGMDWVTTT--DIVIASEQATFFDPHVSIGLVA--G-RE--------------LVRVS 162 (274)
T ss_dssp TCCCTTSCCSCEEEEECSEEEGGGHHHHHHS--SEEEEETTCEEECCGGGGTCCC--C-HH--------------HHHHT
T ss_pred HHHHHHhCCCCEEEEECCeeehHHHHHHHhC--CEEEEcCCCEEECcccccCccc--c-hH--------------HHHHH
Confidence 3445777889999999999999999999999 5799999998877443322111 1 10 00111
Q ss_pred HHhCCCHHHHHhhhCCCc--cccHHHHHHcCcceEEeCCc
Q 031001 118 KGTGKPKEEIAKDIQRPK--YMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 118 ~~tg~~~~~i~~~~~~~~--~lsa~EA~e~GliD~I~~~~ 155 (167)
+..| ...-.+++-... .++|+||+++||||+|++..
T Consensus 163 r~vG--~~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~ 200 (274)
T 3tlf_A 163 RVLP--RSIALRMALMGKHERMSAQRAYELGLISEIVEHD 200 (274)
T ss_dssp TTSC--HHHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGG
T ss_pred HHhC--HHHHHHHHHcCCCCccCHHHHHHCCCCCeecCHH
Confidence 2222 223334444455 89999999999999998753
No 91
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=97.71 E-value=5.8e-05 Score=67.08 Aligned_cols=127 Identities=20% Similarity=0.259 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcC--CCCceeeecCCceeeec
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYL 85 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag--~~~~R~~~p~s~~miH~ 85 (167)
.-||...+|+||-..+ ..|-.|....+-.++..+...+.|+.+++.|.|+|.|.+.+.+. ..+..++.|++.+.+-.
T Consensus 365 ~~Plv~lvDtpG~~~G~~~E~~g~~~~~A~~~~a~~~~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~Vm~ 444 (527)
T 1vrg_A 365 NIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVMG 444 (527)
T ss_dssp TCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSC
T ss_pred CCCeEEEecCCCCcCchhhHHhHHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEEecC
Confidence 5699999999995432 33455778888889999999999999999999999888776541 12567888998877655
Q ss_pred ccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHh-hhC--CCccccHHHHHHcCcceEEeCCc
Q 031001 86 PVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAK-DIQ--RPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 86 p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~-~~~--~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
|. + +..+. +.+++.+. .++++..+ +.. ++...+|..+.+.|+||.|+++.
T Consensus 445 pe-g-----aa~Il-~r~~~~~~-------------~d~~~~~~~~~~~y~~~~~~p~~~~~~g~iD~II~p~ 497 (527)
T 1vrg_A 445 PE-G-----AANII-FKREIEAS-------------SNPEETRRKLIEEYKQQFANPYIAASRGYVDMVIDPR 497 (527)
T ss_dssp HH-H-----HHHHH-THHHHHHS-------------SCHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEECCGG
T ss_pred HH-H-----HHHHH-hhhhhhcc-------------cCHHHHHHHHHHHHHHhhCCHHHHHHcCCCCeeeCHH
Confidence 53 1 11211 11111110 01222211 111 13346788899999999999863
No 92
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=97.66 E-value=5.1e-05 Score=67.41 Aligned_cols=127 Identities=16% Similarity=0.179 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcC--CCCceeeecCCceeeec
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYL 85 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag--~~~~R~~~p~s~~miH~ 85 (167)
+-||...+|+||-..+ ..|--|.+..+-.+..++...+.|+.|++.|.++|.|.+.+.+. ..+..++.|++.+.+-.
T Consensus 361 ~iPlv~lvDtpGf~~G~~~E~~Gi~~~~A~~l~a~a~~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~Vm~ 440 (523)
T 1on3_A 361 NIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIAVMG 440 (523)
T ss_dssp TCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEESSC
T ss_pred CCCeEEEEeCCCcCcchHHHHhhHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEEecC
Confidence 5699999999995533 34555888889999999999999999999999999988776551 12567888898877655
Q ss_pred ccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHh-hhC--CCccccHHHHHHcCcceEEeCCc
Q 031001 86 PVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAK-DIQ--RPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 86 p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~-~~~--~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
|. + +..+. +.+++.+. .++++..+ +.. ++...+|..+.+.|+||.|+++.
T Consensus 441 pe-g-----aa~Il-~r~~~~~~-------------~d~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II~p~ 493 (523)
T 1on3_A 441 AE-G-----AANVI-FRKEIKAA-------------DDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDPA 493 (523)
T ss_dssp HH-H-----HHHHH-THHHHHHS-------------SCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCGG
T ss_pred HH-H-----HHHHH-hhhhhhcc-------------cCHHHHHHHHHHHHHHhhCCHHHHHhcCCCCEeeCHH
Confidence 53 1 11211 11111111 01122111 111 12346788899999999999863
No 93
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.56 E-value=0.0004 Score=64.02 Aligned_cols=102 Identities=22% Similarity=0.230 Sum_probs=71.8
Q ss_pred HHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHH
Q 031001 34 DAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYI 113 (167)
Q Consensus 34 ~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~ 113 (167)
....+++.|..++.||.+.+.|.|.+.|.-++++| +-|++.++++|.+-...++-.-|-..- ..|
T Consensus 94 ~~~~~~~~i~~~~kPvIAai~G~a~GGG~elalac--D~ria~~~a~fg~pev~lGl~Pg~ggt-----~rL-------- 158 (742)
T 3zwc_A 94 ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGC--HYRIANAKARVGLPEVTLGILPGARGT-----QLL-------- 158 (742)
T ss_dssp HHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHTS--SEEEEETTCEEECGGGGGTCCCTTTHH-----HHH--------
T ss_pred HHHHHHHHHHhCCCCEEEEECccchHHHHHHHHhc--CEEEEcCCCEEECcccCcccCCCccHH-----HHH--------
Confidence 45578899999999999999999999999999999 589999999877633332221111100 001
Q ss_pred HHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 114 ELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 114 ~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
.+..| ...-.+++-....++|+||+++||||+|.+..
T Consensus 159 ---~rlvG--~~~A~~l~ltG~~i~a~eA~~~GLv~~vv~~d 195 (742)
T 3zwc_A 159 ---PRVVG--VPVALDLITSGKYLSADEALRLGILDAVVKSD 195 (742)
T ss_dssp ---HHHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEESSC
T ss_pred ---HHhhh--HHHHHHHHHcCCchhHHHHHHcCCccEecCch
Confidence 11111 22333445567889999999999999998764
No 94
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=97.48 E-value=0.00028 Score=58.55 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHH-------HHHHHHHHhhc---CCCeEEEEccccccHHHHHH-hcCCCCceeeec
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETD-------AYAIADAMAYC---KSKVYTVNCGMAYGQAAMLL-SVGAKGYRGLQP 77 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~-------g~aI~~~i~~~---~~~V~t~~~G~aaS~a~~i~-~ag~~~~R~~~p 77 (167)
.-|+.+..+|+| +++.+ +-.|...+..+ +.|+.+++.|-|++.|++.+ ++| +.+++.|
T Consensus 153 ~~PvI~l~~sGG---------arlqeg~~~l~~~~~i~~al~~~~~~~vP~IavV~G~~~GGg~a~~a~~~--D~via~~ 221 (304)
T 2f9y_B 153 NCPLICFSASGG---------ARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLG--DLNIAEP 221 (304)
T ss_dssp TCCEEEEEEESS---------BCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCC--SEEEECT
T ss_pred CCCEEEEECCCC---------cCHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCccHHHHHHHhcC--CEEEEeC
Confidence 458999999999 55533 23456666544 89999999999999886664 455 5789999
Q ss_pred CCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCchH
Q 031001 78 NSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 157 (167)
Q Consensus 78 ~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~~ 157 (167)
+|++.+--|. -+ ...+|.. +. +-..+++++.+.|+||.|++. ++
T Consensus 222 ~A~i~v~Gp~---------~i------------------~~~ig~~-------l~-~~~~~Ae~~~~~Glvd~Vv~~-~e 265 (304)
T 2f9y_B 222 KALIGFAGPR---------VI------------------EQTVREK-------LP-PGFQRSEFLIEKGAIDMIVRR-PE 265 (304)
T ss_dssp TCBEESSCHH---------HH------------------HHHHTSC-------CC-TTTTBHHHHGGGTCCSEECCH-HH
T ss_pred CcEEEeecHH---------HH------------------HHHhCcc-------CC-cccCCHHHHHhcCCccEEeCc-HH
Confidence 9988763222 11 1112221 22 345799999999999999865 34
Q ss_pred HHh
Q 031001 158 AYE 160 (167)
Q Consensus 158 ~~~ 160 (167)
+.+
T Consensus 266 l~~ 268 (304)
T 2f9y_B 266 MRL 268 (304)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 95
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.32 E-value=0.00041 Score=61.70 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=63.2
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhc--CCCCceeeecCCceeeec
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSV--GAKGYRGLQPNSSTKLYL 85 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~a--g~~~~R~~~p~s~~miH~ 85 (167)
+-||...+|+||-... ..|-.|.+..+-.+..++...+.|+.|++.|.+.|.|.+.+++ -..+..++.|++.+.+-.
T Consensus 373 ~iPlv~lvDtpGf~~G~~~E~~Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~Vm~ 452 (531)
T 3n6r_B 373 EIPLLTLIDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMG 452 (531)
T ss_dssp TCCEEEEEEECSBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSC
T ss_pred CCCEEEEeCCCCCCCCHHHHHhhHHHHHHHHHHHHHhCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEecCC
Confidence 4699999999995533 4444578889999999999999999999999999999887664 113567889999887755
Q ss_pred cc
Q 031001 86 PV 87 (167)
Q Consensus 86 p~ 87 (167)
|.
T Consensus 453 pe 454 (531)
T 3n6r_B 453 AK 454 (531)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 96
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.29 E-value=0.00012 Score=65.18 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcC---CCCceeeecCCceeee
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVG---AKGYRGLQPNSSTKLY 84 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag---~~~~R~~~p~s~~miH 84 (167)
+-||...+|+||-..+ ..|--|.+..+-.+..++...+.|+.|++.|.+.|.|.+. +++ ..+..++.|++.+.+-
T Consensus 367 ~iPlv~lvDtpGf~~G~~~E~~gi~~~~Ak~l~a~a~a~vP~itvI~g~~~GGa~~a-m~~~~~~~d~~~awp~a~~~Vm 445 (530)
T 3iav_A 367 NVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYVV-MGSKHLGADLNLAWPTAQIAVM 445 (530)
T ss_dssp TCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH-TTCGGGTCSEEEECTTCEEESS
T ss_pred CCCEEEEeeCCCCCccHHHHHhhHHHHHHHHHHHHHhCCCCEEEEEeCCcchHHHHH-hcCCCCCCCEEEEcCCceEecC
Confidence 4699999999995533 3344578888999999999999999999999999966654 443 1367788999988775
Q ss_pred ccc
Q 031001 85 LPV 87 (167)
Q Consensus 85 ~p~ 87 (167)
.|.
T Consensus 446 ~~e 448 (530)
T 3iav_A 446 GAQ 448 (530)
T ss_dssp CHH
T ss_pred CHH
Confidence 554
No 97
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=97.26 E-value=0.00063 Score=62.40 Aligned_cols=96 Identities=20% Similarity=0.194 Sum_probs=65.7
Q ss_pred HHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCc--CChhHHHHHHHHHHHHHHHHHHH
Q 031001 38 IADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSS--GPVTDMWRKAKDLEANAESYIEL 115 (167)
Q Consensus 38 I~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~--G~~~dl~~~~~~l~~~~~~~~~~ 115 (167)
++..|..++.||.+.+.|.|.+.|.-++++| +.|++.++++|.+-...++-.- |-..-+ -
T Consensus 94 ~~~~l~~~~kPvIAav~G~a~GgG~elalac--D~ria~~~a~fglpev~lGl~P~~Ggt~~L-------~--------- 155 (725)
T 2wtb_A 94 ITDLLEAARKPSVAAIDGLALGGGLELAMAC--HARISAPAAQLGLPELQLGVIPGFGGTQRL-------P--------- 155 (725)
T ss_dssp CCCCCCTSSSCEEEEECSEEETHHHHHHHHS--SEEEECTTCEEECCGGGGTCCCCSSHHHHH-------H---------
T ss_pred HHHHHHhCcCcEEEEECCccCcccHHHHHhC--CEEEEcCCCEEeCchhccCCCCCccHHHHH-------H---------
Confidence 3445667789999999999999999999999 5899999998766433322221 111111 1
Q ss_pred HHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 116 LAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 116 ~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
+..| ...-.+++-....++|+||+++||||+|+++.
T Consensus 156 --rlvG--~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~ 191 (725)
T 2wtb_A 156 --RLVG--LTKALEMILTSKPVKAEEGHSLGLIDAVVPPA 191 (725)
T ss_dssp --HHHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEECCTT
T ss_pred --HhcC--HHHHHHHHHcCCCCCHHHHHHCCccceEcChh
Confidence 1111 22233444456789999999999999998643
No 98
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=97.15 E-value=0.00026 Score=61.63 Aligned_cols=90 Identities=19% Similarity=0.057 Sum_probs=62.1
Q ss_pred hcCCCeEEEEccccccHHHHHHhcCCCCceeeecCCceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 031001 44 YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKP 123 (167)
Q Consensus 44 ~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~ 123 (167)
.++.||.+.+.|.|.+.|+-++++| +-|++.++++|.+-...++.. .+...+ .|-+ ..|
T Consensus 282 ~~pkPvIAAVnG~A~GGG~eLALaC--DirIAae~A~Fglpev~lGl~----P~~g~~--~L~r-----------lvG-- 340 (440)
T 2np9_A 282 RIEKPWVAAVDGFAIGGGAQLLLVF--DRVLASSDAYFSLPAAKEGII----PGAANL--RLGR-----------FAG-- 340 (440)
T ss_dssp EECCCEEEEECSEEETHHHHHGGGC--SEEEEETTCEEECCCTTTCCC----CTTHHH--HHHH-----------HHH--
T ss_pred cCCCCEEEEECCcccccchHHHhhC--CEEEEcCCCEEECchhccCcC----cchHHH--HHHH-----------Hhh--
Confidence 5779999999999999999999999 579999999887754443322 121100 1111 111
Q ss_pred HHHHHhhhCCCccccHHHHHHcCcceEEeCC
Q 031001 124 KEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154 (167)
Q Consensus 124 ~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~ 154 (167)
...-.+++-....++++||+++||||+|++.
T Consensus 341 ~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~ 371 (440)
T 2np9_A 341 PRVSRQVILEGRRIWAKEPEARLLVDEVVEP 371 (440)
T ss_dssp HHHHHHHHHHCCCEETTSGGGGGTCSEEECH
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCCcEecCh
Confidence 1222334445667999999999999999864
No 99
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=97.07 E-value=0.0024 Score=57.03 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcC--CCCceeeecCCceeeec
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVG--AKGYRGLQPNSSTKLYL 85 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag--~~~~R~~~p~s~~miH~ 85 (167)
+-||...+|+||-..+ ..|--|.+..+-.+..++...+.|+.|++.|.+.+.|++.+++. ..+..++.|++.+.+-.
T Consensus 387 ~iPlv~lvDtpGf~~G~~~E~~Gi~~~gAk~~~a~~~a~vP~itvi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~Vmg 466 (555)
T 3u9r_B 387 GIPLLFLQNITGFMVGQKYEAGGIAKHGAKLVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMG 466 (555)
T ss_dssp TCCEEEEEEECCBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEETTHHHHTTCGGGCCSEEEECTTCEEESSC
T ss_pred CCCEEEEecCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCccchhhHhhcCccCCCCeEEEcCCcEEEcCC
Confidence 4699999999995432 33444888889999999999999999999999999988876531 22567888888776644
Q ss_pred c
Q 031001 86 P 86 (167)
Q Consensus 86 p 86 (167)
|
T Consensus 467 p 467 (555)
T 3u9r_B 467 G 467 (555)
T ss_dssp H
T ss_pred H
Confidence 4
No 100
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=97.05 E-value=0.0015 Score=58.72 Aligned_cols=134 Identities=10% Similarity=0.093 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhc---CC-CCceeeecCCceee
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSV---GA-KGYRGLQPNSSTKL 83 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~a---g~-~~~R~~~p~s~~mi 83 (167)
+-||...+|+||-..+ ..|--|.+..+-.+..++...+.|+.|++.|.+.|.|.+.+++ ++ ....++.|+|.+.+
T Consensus 408 ~iPlv~lvDtpGf~~G~~aE~~Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~~am~~~~~~~~~~~~~awp~A~~sV 487 (588)
T 3gf3_A 408 RIPLIWLQDTTGIDVGDEAEKAELLGLGQSLIYSIENSKLPSLEITIRKASAAAHYVLGGPQGNNTNVFSIGTGACEYYV 487 (588)
T ss_dssp TCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHHHCSCEEEEESSEEETTHHHHTTCTTCTTTEEEEEECTTCEEES
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCccHHHHHHhcccccCCccceEEECCCceEEe
Confidence 4699999999995533 3344488888999999999999999999999999988766554 11 01446678887766
Q ss_pred ecccccCCcCChhHHHHHHHHHHHHHHH---HHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCch
Q 031001 84 YLPVVGRSSGPVTDMWRKAKDLEANAES---YIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156 (167)
Q Consensus 84 H~p~~~~~~G~~~dl~~~~~~l~~~~~~---~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~~ 156 (167)
-.|. + +..+ .+.+++.+.++. .....++ .+++.+...+. .+|--|.+.|++|.||++.+
T Consensus 488 m~pE-g-----aa~I-l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~y~~~--~~p~~aA~r~~vD~VIdP~~ 549 (588)
T 3gf3_A 488 MPGE-T-----AANA-MYSRKLVKAKKAGEDLQPIIGK-----MNDMIQMYTDK--SRPKYCTEKGMVDEIVDMTE 549 (588)
T ss_dssp SCHH-H-----HHHH-HHHHHHHHC-------CHHHHH-----HHHHHHHHHHT--TSHHHHHHTTSSSEECCGGG
T ss_pred CCHH-H-----HHHH-HhhhHHhhhhccccccchHHHH-----HHHHHHHHHHh--CCHHHHHhcCCCCeeeCHHH
Confidence 5443 1 2222 122333322110 0000000 01122222222 58999999999999998753
No 101
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.90 E-value=0.00014 Score=64.66 Aligned_cols=77 Identities=18% Similarity=0.191 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhc----CCCCceeeecCCceee
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSV----GAKGYRGLQPNSSTKL 83 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~a----g~~~~R~~~p~s~~mi 83 (167)
.-||...+||||-..+ ..|--|.+..+-.++..+...+.|+.+++.|.++|.|++.+++ + +..++.|+|.+.+
T Consensus 360 ~~Plv~l~ds~G~~~G~~~E~~G~~~~~Ak~l~~~~~~~vP~Isvi~g~~~GGg~~~~a~~a~~~--D~v~a~p~A~i~v 437 (522)
T 1x0u_A 360 NIPLISLVDTPGYVPGTDQEYKGIIRHGAKMLYAFAEATVPKITVIVRKSYGGAHIAMSIKSLGA--DLVYAWPTAEIAV 437 (522)
T ss_dssp TCCEEEEEEECCBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTCCGGGTC--SEEEECTTCEEES
T ss_pred CCCEEEEecCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCcccHHHHHhcccccCC--CEEEEeCCCEEEe
Confidence 5699999999993321 2333477788888999999999999999999999999988766 4 5678889988877
Q ss_pred eccc
Q 031001 84 YLPV 87 (167)
Q Consensus 84 H~p~ 87 (167)
-.|.
T Consensus 438 ~gpe 441 (522)
T 1x0u_A 438 TGPE 441 (522)
T ss_dssp SCHH
T ss_pred cCHH
Confidence 6664
No 102
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=96.70 E-value=0.0043 Score=51.01 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=65.4
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHH-------H---HHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeeecC
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAY-------A---IADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN 78 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~-------a---I~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~ 78 (167)
.-|+..+++|+| ....+|. . ....+.....|..+++.|-+.+.++..++... +..++.|+
T Consensus 156 ~lPlI~l~dsgG---------ar~qEGi~sl~q~aki~~~l~~~s~~~vP~Isvv~g~~~GG~~as~a~~~-D~i~a~p~ 225 (285)
T 2f9i_B 156 RLPFILFSASGG---------ARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVG-DINLSEPK 225 (285)
T ss_dssp TCCEEEEEEECS---------CCGGGHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCC-SEEEECTT
T ss_pred CCCEEEEEeCCC---------cchhhhhhhHhHHHHHHHHHHHHHcCCCCEEEEEeCCccHHHHHHhhhCC-CEEEEeCC
Confidence 469999999999 4444432 2 33334445689999999999887766643332 45678889
Q ss_pred CceeeecccccCCcCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHHcCcceEEeCCc
Q 031001 79 SSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155 (167)
Q Consensus 79 s~~miH~p~~~~~~G~~~dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~I~~~~ 155 (167)
|.+.+--|.. ++ .. ++.+. . +-+=+|+-..+.|+||.|+++.
T Consensus 226 A~i~~aGP~v---------i~----~~--------------~~~~~-------~-e~~~~Ae~~~~~G~iD~Iv~~~ 267 (285)
T 2f9i_B 226 ALIGFAGRRV---------IE----QT--------------INEKL-------P-DDFQTAEFLLEHGQLDKVVHRN 267 (285)
T ss_dssp CBEESSCHHH---------HH----HH--------------HTSCC-------C-TTTTBHHHHHHTTCCSEECCGG
T ss_pred cEEEEcCHHH---------HH----HH--------------hcccc-------h-HhHhhHHHHHhcCCccEEeChH
Confidence 8877654431 10 00 11111 1 2234688889999999999855
No 103
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=96.28 E-value=0.003 Score=58.53 Aligned_cols=79 Identities=13% Similarity=0.063 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEE--ccccccHHHHHHhcCCCC-c---eeeecCCc
Q 031001 8 ASKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVN--CGMAYGQAAMLLSVGAKG-Y---RGLQPNSS 80 (167)
Q Consensus 8 ~~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~--~G~aaS~a~~i~~ag~~~-~---R~~~p~s~ 80 (167)
.+-||...+|+||-..+ ..|--|-+..+-.+..++...+.|+.|++ .|.+.+ |++.+++..-+ + .++.|+|.
T Consensus 482 f~iPlv~LvDtpGf~~G~~aE~~Gi~~~gAkll~A~a~a~VP~itvI~r~Ge~~G-Ga~~~~~~~~~~d~~ev~Awp~A~ 560 (793)
T 2x24_A 482 EKLPLMIFANWRGFSGGMKDMYDQVLKFGAYIVDGLRKYRQPVLIYIPPYAEVRG-GSWAVMDTSINPLCIEMYADRESR 560 (793)
T ss_dssp TTCCEEEECCBCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTCEEEH-HHHHTTCGGGSTTTEEEEEETTCE
T ss_pred CCCCEEEEecCCCCCCCHHHHHhhHHHHHHHHHHHHHhcCCCEEEEEecCCcccc-hhHHhhhcccCccHHHHhhhccCE
Confidence 35799999999996544 44555888899999999999999999999 888765 66666643222 2 37888888
Q ss_pred eeeeccc
Q 031001 81 TKLYLPV 87 (167)
Q Consensus 81 ~miH~p~ 87 (167)
+.+-.|.
T Consensus 561 ~~VM~pE 567 (793)
T 2x24_A 561 ASVLEPE 567 (793)
T ss_dssp EESSCHH
T ss_pred EEecCHH
Confidence 8765554
No 104
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=93.87 E-value=0.026 Score=52.05 Aligned_cols=78 Identities=14% Similarity=0.054 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCCCCCC-CCCCCCCHHHHHHHHHHHhhcCCCeEEEEc--cccccHHHHHHhcCC--CCc--eeeecCCce
Q 031001 9 SKPIYLYINSSGTQNE-KKESVGAETDAYAIADAMAYCKSKVYTVNC--GMAYGQAAMLLSVGA--KGY--RGLQPNSST 81 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~-~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~--G~aaS~a~~i~~ag~--~~~--R~~~p~s~~ 81 (167)
+-||...+|+||-..+ ..|--|....+-.+..++...+.|+.|++. |.+.|.|. +.++++ .+. .++.|+|.+
T Consensus 469 ~iPLv~LvDtpGf~~G~~aE~~Gi~k~gAkll~A~a~a~VP~itVI~RkGe~~GGA~-~am~~~~~ad~~~v~Awp~A~i 547 (758)
T 3k8x_A 469 QLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSW-VVVDPTINADQMEMYADVNARA 547 (758)
T ss_dssp CCCEEECCCCCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTCEEETHHH-HTTCGGGSTTTEEEEEETTCEE
T ss_pred CCCEEEEecCCCCCCCHHHHHccHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHH-HHhCcccCCCHHHHhcCCCCEE
Confidence 5799999999996544 444558889999999999999999999999 99877554 555421 233 788899988
Q ss_pred eeeccc
Q 031001 82 KLYLPV 87 (167)
Q Consensus 82 miH~p~ 87 (167)
.+-.|.
T Consensus 548 sVM~pE 553 (758)
T 3k8x_A 548 GVLEPQ 553 (758)
T ss_dssp ESSCHH
T ss_pred EccCHH
Confidence 776554
No 105
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=90.19 E-value=1.9 Score=38.21 Aligned_cols=64 Identities=11% Similarity=0.070 Sum_probs=43.7
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHH--------HHHHHHhhc-CCCeEEEEccccccHHHHHHhcCCCCceeeecC-
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAY--------AIADAMAYC-KSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN- 78 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~--------aI~~~i~~~-~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~- 78 (167)
.-|+..+..|.| ..+.+|. ..+...+.+ ..|+.+++.|-|++.+++.++.+ +..++.|+
T Consensus 140 ~lPvI~l~dSGG---------ARmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~Gp~~GG~a~s~a~~--D~vi~~~~~ 208 (531)
T 3n6r_B 140 GAPVIGINDSGG---------ARIQEGVDSLAGYGEVFQRNIMASGVVPQISMIMGPCAGGAVYSPAMT--DFIFMVKDS 208 (531)
T ss_dssp TCCEEEEECCCC---------BCGGGTHHHHHHHHHHHHHHHHTTTTSCEEEEECSCCBGGGGHHHHHS--SEEEEETTT
T ss_pred CCCEEEEeCCCc---------cccCcccchhhhHHHHHHHHHHHhCCCCEEEEEeCCcchHHHHHhhhC--CEEEEecCC
Confidence 458888889988 5543332 233333332 36999999999999998888877 46677775
Q ss_pred Cceee
Q 031001 79 SSTKL 83 (167)
Q Consensus 79 s~~mi 83 (167)
+.+.+
T Consensus 209 a~i~~ 213 (531)
T 3n6r_B 209 SYMFV 213 (531)
T ss_dssp CBCBS
T ss_pred ceEee
Confidence 65544
No 106
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=75.20 E-value=4.3 Score=36.31 Aligned_cols=67 Identities=10% Similarity=-0.005 Sum_probs=46.8
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHHHH-------------HHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceee
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAYAI-------------ADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGL 75 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~aI-------------~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~ 75 (167)
.-|+...++|+| ..+.++... ...+...+.|+.+++.|-|++.+++. +.+ +..++
T Consensus 140 ~lPvI~l~dSgG---------Arlqe~~~~l~~~~~~g~i~~~~~~ls~~giP~Isvv~G~~~GGga~~-a~~--d~vim 207 (587)
T 1pix_A 140 HVPLVYVLNCSG---------VKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGGGYH-SIS--PTVII 207 (587)
T ss_dssp TCCEEEEECCCE---------ECGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHH-HHS--SSEEE
T ss_pred CCCEEEEEeCCC---------CCccccchhccccccHHHHHHHHHHHhCCCCCEEEEEecCCcHHHHHH-Hhc--CceEE
Confidence 358889999999 444333221 23445566899999999999999998 666 45666
Q ss_pred ec-CCceeeeccc
Q 031001 76 QP-NSSTKLYLPV 87 (167)
Q Consensus 76 ~p-~s~~miH~p~ 87 (167)
.+ +|.+.+--|.
T Consensus 208 ~e~~a~i~~~GP~ 220 (587)
T 1pix_A 208 AHEKANMAVGGAG 220 (587)
T ss_dssp EETTCEEESCCCT
T ss_pred ecCCcEEEecCHH
Confidence 65 5877776664
No 107
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=72.35 E-value=4.5 Score=35.69 Aligned_cols=68 Identities=13% Similarity=0.051 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHHH--------HHHHHh-hcCCCeEEEEccccccHHHHHHhcCCCCceeeecC-
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAYA--------IADAMA-YCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN- 78 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~a--------I~~~i~-~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~- 78 (167)
.-|+..++.|+| ..+.++.. ++...+ +-..|+.+++.|-|++.+++.++.| +..++.|+
T Consensus 133 ~lPvI~l~dSgG---------AR~qeg~~~l~g~~~~~~~~~~~s~~iP~Isvv~Gp~~GG~a~s~al~--D~vi~~~~~ 201 (527)
T 1vrg_A 133 GIPVIGINDSGG---------ARIQEGVDALAGYGEIFLRNTLASGVVPQITVIAGPCAGGAVYSPALT--DFIVMVDQT 201 (527)
T ss_dssp TCCEEEEEEECS---------BCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEEBGGGGHHHHHS--SEEEEETTT
T ss_pred CCCEEEEECCCC---------CCccchhHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCchHHHHHHHcC--CeEEEecCc
Confidence 468988899998 44432222 222222 2337999999999999999998877 46788898
Q ss_pred Cceeeeccc
Q 031001 79 SSTKLYLPV 87 (167)
Q Consensus 79 s~~miH~p~ 87 (167)
+.+.+--|.
T Consensus 202 a~i~~aGP~ 210 (527)
T 1vrg_A 202 ARMFITGPN 210 (527)
T ss_dssp CBCBSSCHH
T ss_pred eEEEecCHH
Confidence 766665444
No 108
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=64.56 E-value=23 Score=31.63 Aligned_cols=68 Identities=10% Similarity=-0.047 Sum_probs=44.6
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCH--HHH---------HHHHH--HHhhcCCCeEEEEccccccHHHHHHhcCCCCceee
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAE--TDA---------YAIAD--AMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGL 75 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v--~~g---------~aI~~--~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~ 75 (167)
.-|+...++|+| ..+ .++ .-.++ .+.....|+.+++.|-|++.+++..++++ --.+
T Consensus 141 ~lPvI~l~dSgG---------Arl~~qe~~~~~l~~~g~if~~~~~ls~~~iP~Isvv~Gp~~gGgAy~a~~~~--vim~ 209 (588)
T 3gf3_A 141 HLPLIYLLNCSG---------VEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTNPAGGGYHSISPT--ILIA 209 (588)
T ss_dssp TCCEEEEECCCC---------BCGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHHHHSSS--EEEE
T ss_pred CCCEEEEEcCCC---------cCcccccccccchhhHHHHHHHHHHHhcCCCCEEEEEeCCCCchhhhHhhCCe--EEEE
Confidence 358889999999 444 111 11222 23344689999999999998887755553 3345
Q ss_pred ecCCceeeeccc
Q 031001 76 QPNSSTKLYLPV 87 (167)
Q Consensus 76 ~p~s~~miH~p~ 87 (167)
.|++.+.+--|.
T Consensus 210 ~~~a~i~~aGP~ 221 (588)
T 3gf3_A 210 HQDANMAVGGAG 221 (588)
T ss_dssp ETTCEEESSCCC
T ss_pred ECCcEEEecChh
Confidence 678877776664
No 109
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=60.74 E-value=12 Score=33.00 Aligned_cols=68 Identities=15% Similarity=0.081 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHHH-------HHHHHhhc--CCCeEEEEccccccHHHHHHhcCCCCceeeecC-
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAYA-------IADAMAYC--KSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN- 78 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~a-------I~~~i~~~--~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~- 78 (167)
.-|+..+..|+| ..+.+|.. ++..+..+ ..|..+++.|-|++.+++.++.+ +..++.++
T Consensus 132 ~lP~I~l~dSgG---------aRmqEg~~~l~~~~~i~~~~~~~s~~iP~Isvv~G~~~GG~a~~~al~--D~~im~~~~ 200 (530)
T 3iav_A 132 GCPVVGINDSGG---------ARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAIT--DFTVMVDQT 200 (530)
T ss_dssp TCCEEEEECCCS---------BCGGGTHHHHHHHHHHHHHHHHTTTTSCEEEEECSEEEGGGGHHHHHS--SEEEEETTT
T ss_pred CCCEEEEEcCCC---------cchhhhhhhHHHHHHHHHHHHHHcCCCCEEEEEecCcchHHHHHHHhC--CEEEEecCC
Confidence 458888889988 55544322 22222222 27999999999999999888877 45676665
Q ss_pred Cceeeeccc
Q 031001 79 SSTKLYLPV 87 (167)
Q Consensus 79 s~~miH~p~ 87 (167)
+.+.+--|.
T Consensus 201 a~i~~aGP~ 209 (530)
T 3iav_A 201 SHMFITGPD 209 (530)
T ss_dssp CEEESSCHH
T ss_pred cEEEecCHH
Confidence 877665554
No 110
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=57.34 E-value=32 Score=30.53 Aligned_cols=77 Identities=13% Similarity=0.062 Sum_probs=46.1
Q ss_pred CCCeEEEEcCCCCCC-CCCCCCC---CHHHHHHHHHHHhhcCCCeEEEEccccccHHHHHHhcCCCCceeee-cCCceee
Q 031001 9 SKPIYLYINSSGTQN-EKKESVG---AETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQ-PNSSTKL 83 (167)
Q Consensus 9 ~~~I~l~INS~G~~~-~~~~~~G---~v~~g~aI~~~i~~~~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~-p~s~~mi 83 (167)
.-|+...++|+|.-- ...+.+. ..-..+.-...+.....|+.+++.|-|++.+++.++.++ ..++. |++.+.+
T Consensus 156 ~lPvI~l~dSgGARl~~q~~~~~~~~~~~~i~~~~~~ls~~giP~Isvv~G~~~GGga~~~a~~d--~vim~e~~a~i~~ 233 (555)
T 3u9r_B 156 RLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSARGIPQIAVVMGSCTAGGAYVPAMSD--ETVMVREQATIFL 233 (555)
T ss_dssp TCCEEEEECCCCBCGGGGGGTSSSTTSTTHHHHHHHHHHHTTCCEEEEECSCCBGGGGHHHHTSS--EEEEETTTCBCBS
T ss_pred CCCEEEEECCCCCCCCCcceeecccccHHHHHHHHHHHhcCCCCEEEEEecCCCccHHHHHHhCC--ceEEecCCceEEE
Confidence 468888889988320 1122221 111112222234445689999999999999998888773 44544 5676655
Q ss_pred eccc
Q 031001 84 YLPV 87 (167)
Q Consensus 84 H~p~ 87 (167)
--|.
T Consensus 234 aGP~ 237 (555)
T 3u9r_B 234 AGPP 237 (555)
T ss_dssp SCHH
T ss_pred ccHH
Confidence 5443
No 111
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=50.24 E-value=13 Score=32.66 Aligned_cols=68 Identities=12% Similarity=0.121 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHHH-------HHHHHhhc--CCCeEEEEccccccHHHHHHhcCCCCceeeecCC
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAYA-------IADAMAYC--KSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNS 79 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~a-------I~~~i~~~--~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~s 79 (167)
.-|+..+..|.| ..+.+|.. ++..+... ..|..+++.|-|++.+++.++.| +..++.|++
T Consensus 130 ~lP~I~l~~SGG---------ARmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~gp~~GG~a~s~~l~--D~ii~~~~a 198 (523)
T 1on3_A 130 GTPFLFFYDSGG---------ARIQEGIDSLSGYGKMFFANVKLSGVVPQIAIIAGPCAGGASYSPALT--DFIIMTKKA 198 (523)
T ss_dssp TCCEEEEEEECS---------BCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEEESGGGHHHHHS--SEEEEETTC
T ss_pred CCCEEEEEcCCC---------CChhhHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCchHHHHHHhhC--CeEEEeCCC
Confidence 358888888888 55443332 22222222 27999999999998888888777 467888998
Q ss_pred ceeeeccc
Q 031001 80 STKLYLPV 87 (167)
Q Consensus 80 ~~miH~p~ 87 (167)
.+.+--|.
T Consensus 199 ~i~~aGP~ 206 (523)
T 1on3_A 199 HMFITGPQ 206 (523)
T ss_dssp EEESSCHH
T ss_pred EEEecCHH
Confidence 87776665
No 112
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=50.03 E-value=20 Score=31.71 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHH-------HHHHHHhhcC--CCeEEEEccccccHHHHHHhcCCCCceeeecC-
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAY-------AIADAMAYCK--SKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN- 78 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~-------aI~~~i~~~~--~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~- 78 (167)
.-|+..+..|.| ..+.++. .|+..+...+ .|..+++.|-|++.+++.++.+ +..++.|+
T Consensus 143 ~lP~I~l~dSGG---------ARmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~gp~~GG~a~s~al~--D~ii~~~~~ 211 (548)
T 2bzr_A 143 GRPLIGINDGAG---------ARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALT--DFVIMVDQT 211 (548)
T ss_dssp TCCEEEEECCCS---------CCGGGTTHHHHHHHHHHHHHHHTTTTSCEEEEECSEEESGGGHHHHHS--SEEEEETTT
T ss_pred CCCEEEEEcCCC---------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCchHHHHHHHhC--CeEEeccCc
Confidence 358877788888 4433222 1333333333 7999999999999999888877 46788887
Q ss_pred Cceeeeccc
Q 031001 79 SSTKLYLPV 87 (167)
Q Consensus 79 s~~miH~p~ 87 (167)
|.+.+--|.
T Consensus 212 a~i~~aGP~ 220 (548)
T 2bzr_A 212 SQMFITGPD 220 (548)
T ss_dssp CEEESSCHH
T ss_pred eeEEeccHH
Confidence 777666554
No 113
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=48.92 E-value=24 Score=31.01 Aligned_cols=68 Identities=13% Similarity=0.060 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHHH-------HHHHHhhc--CCCeEEEEccccccHHHHHHhcCCCCceeeecC-
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAYA-------IADAMAYC--KSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPN- 78 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~a-------I~~~i~~~--~~~V~t~~~G~aaS~a~~i~~ag~~~~R~~~p~- 78 (167)
.-|+..+..|.| ..+.++.. ++..+... ..|..+++.|-|++.+++.++.| +..++.|+
T Consensus 126 ~~P~I~l~~SGG---------aRmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~gp~~GG~a~s~~l~--D~~i~~~~~ 194 (522)
T 1x0u_A 126 GAPVVGINDSGG---------ARIQEGALSLEGYGAVFKMNVMASGVIPQITIMAGPAAGGAVYSPALT--DFIIMIKGD 194 (522)
T ss_dssp TCCEEEEECCCS---------BCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEECSEEEGGGGHHHHHS--SEEEEECST
T ss_pred CCCEEEEEcCCC---------CChhHHHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHhcC--CeEEEecCC
Confidence 358877788888 55433322 22222222 27999999999999888888877 46788898
Q ss_pred C-ceeeeccc
Q 031001 79 S-STKLYLPV 87 (167)
Q Consensus 79 s-~~miH~p~ 87 (167)
+ .+.+--|.
T Consensus 195 a~~i~~aGP~ 204 (522)
T 1x0u_A 195 AYYMFVTGPE 204 (522)
T ss_dssp TCEEESSCHH
T ss_pred ccEEEecCHH
Confidence 7 66665554
No 114
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=46.82 E-value=29 Score=20.15 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=25.3
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
..-+|+.+|.+...+.++.......+.+.+..
T Consensus 21 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 52 (68)
T 2r1j_L 21 QAALGKMVGVSNVAISQWERSETEPNGENLLA 52 (68)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHH
Confidence 45689999999999999988777667766543
No 115
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=46.11 E-value=29 Score=21.18 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...|.++.......+.+.+..
T Consensus 18 q~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ 49 (77)
T 2k9q_A 18 AKSVAEEMGISRQQLCNIEQSETAPVVVKYIA 49 (77)
T ss_dssp HHHHHHHHTSCHHHHHHHHTCCSCCHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHH
Confidence 45689999999999999888776666665543
No 116
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=44.66 E-value=31 Score=20.61 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...+.++.......+.+.+..
T Consensus 21 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 52 (76)
T 1adr_A 21 QAALGKMVGVSNVAISQWERSETEPNGENLLA 52 (76)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45689999999999999988777777776544
No 117
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=43.41 E-value=41 Score=19.87 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...+.++.......+.+.+..
T Consensus 29 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 60 (74)
T 1y7y_A 29 QETLAFLSGLDRSYVGGVERGQRNVSLVNILK 60 (74)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 45689999999999999988777777776543
No 118
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=41.76 E-value=42 Score=20.10 Aligned_cols=32 Identities=9% Similarity=-0.010 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCc-cccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPK-YMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~-~lsa~EA~e 144 (167)
.+-+|+.+|.+...|.++..... ..+.+....
T Consensus 23 q~~lA~~~gis~~~i~~~e~g~~~~~~~~~l~~ 55 (78)
T 3b7h_A 23 INRVATLAGLNQSTVNAMFEGRSKRPTITTIRK 55 (78)
T ss_dssp HHHHHHHHTCCHHHHHHHHCTTCCCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHH
Confidence 46689999999999999998777 777776544
No 119
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=41.46 E-value=51 Score=20.13 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...+.++.......+.+....
T Consensus 30 q~elA~~~gis~~~is~~e~g~~~~~~~~l~~ 61 (83)
T 3f6w_A 30 QKELAARLGRPQSFVSKTENAERRLDVIEFMD 61 (83)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 45689999999999999998777777776654
No 120
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=40.07 E-value=57 Score=19.94 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
..-+|+.+|.+...+.++.....-.+.+.+..
T Consensus 28 q~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ 59 (80)
T 3kz3_A 28 YESVADKMGMGQSAVAALFNGINALNAYNAAL 59 (80)
T ss_dssp HHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45689999999999999998877777766544
No 121
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=37.85 E-value=56 Score=19.46 Aligned_cols=32 Identities=16% Similarity=0.031 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...+.++.......+.+.+..
T Consensus 26 q~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 57 (77)
T 2b5a_A 26 QEELADLAGLHRTYISEVERGDRNISLINIHK 57 (77)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHH
Confidence 45689999999999999988777777766544
No 122
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=37.60 E-value=55 Score=19.99 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...+.++.......+.+.+..
T Consensus 27 q~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 58 (82)
T 3s8q_A 27 QEDLAYKSNLDRTYISGIERNSRNLTIKSLEL 58 (82)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCCCCBHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 45689999999999999988777777776544
No 123
>2wiu_B HTH-type transcriptional regulator HIPB; transferase transcription complex, serine kinase, DNA-bindin mercury derivative, repressor; 2.35A {Escherichia coli} PDB: 3dnv_B* 3dnw_B* 3hzi_B*
Probab=35.99 E-value=45 Score=20.56 Aligned_cols=48 Identities=15% Similarity=0.039 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 97 DMWRKAKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 97 dl~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
++....+.+.+.+..=.+-+|+.+|.+...|.++.......+.+.+..
T Consensus 12 ~~~~~l~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 59 (88)
T 2wiu_B 12 QLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFK 59 (88)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHCGGGCBHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHH
Confidence 343333344333322345689999999999999988767777766543
No 124
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=34.05 E-value=56 Score=19.16 Aligned_cols=32 Identities=0% Similarity=-0.090 Sum_probs=24.6
Q ss_pred HHHHHHHhC--CCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTG--KPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg--~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+| .+...+.++.......+.+.+..
T Consensus 24 q~~lA~~~g~~is~~~i~~~e~g~~~~~~~~l~~ 57 (71)
T 2ewt_A 24 LHGVEEKSQGRWKAVVVGSYERGDRAVTVQRLAE 57 (71)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHTCSCCCHHHHHH
T ss_pred HHHHHHHHCCcCCHHHHHHHHCCCCCCCHHHHHH
Confidence 456899999 99999988887766677666543
No 125
>2ict_A Antitoxin HIGA; helix-turn-helix, structural genomics, PSI-2, protein struct initiative, northeast structural genomics consortium, NESG; 1.63A {Escherichia coli} SCOP: a.35.1.3 PDB: 2icp_A
Probab=33.79 E-value=44 Score=21.18 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
..-+|+.+|.+...|.++.......+.+.+..
T Consensus 24 q~~lA~~~gis~~~is~~e~g~~~~~~~~~~~ 55 (94)
T 2ict_A 24 LREFARAMEIAPSTASRLLTGKAALTPEMAIK 55 (94)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSSCCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHH
Confidence 45688999999999988888777777766543
No 126
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=33.26 E-value=65 Score=21.01 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=26.2
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...|.++.......+.+.+..
T Consensus 44 q~elA~~~gis~~~is~iE~G~~~ps~~~l~~ 75 (99)
T 3g5g_A 44 QEDLAYKSNLDRTYISGIERNSRNLTIKSLEL 75 (99)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 46789999999999999998877777776554
No 127
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=33.04 E-value=48 Score=26.40 Aligned_cols=46 Identities=20% Similarity=0.151 Sum_probs=30.9
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccc
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAY 58 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aa 58 (167)
||...+.++-|.||+-+.| -.-..+...... ..++||..+..|..+
T Consensus 193 ~~~~D~~t~~I~l~~E~~~---------~~~~~~~~~~~~--~~~KPVv~~k~G~~~ 238 (288)
T 1oi7_A 193 LFNEDPETEAVVLIGEIGG---------SDEEEAAAWVKD--HMKKPVVGFIGGRSA 238 (288)
T ss_dssp HHHTCTTCCEEEEEECSSS---------SHHHHHHHHHHH--HCCSCEEEEESCC--
T ss_pred HHhcCCCCCEEEEEEeeCC---------CHHHHHHHHHHh--cCCCCEEEEEecCCC
Confidence 5667777899999999987 222223333333 568999999998776
No 128
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=32.82 E-value=1.1e+02 Score=23.61 Aligned_cols=45 Identities=22% Similarity=0.260 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhC-CCcc----ccH----------HHHHHcCcceEEeC
Q 031001 109 AESYIELLAKGTGKPKEEIAKDIQ-RPKY----MQA----------KEAIVYGLADKIID 153 (167)
Q Consensus 109 ~~~~~~~~a~~tg~~~~~i~~~~~-~~~~----lsa----------~EA~e~GliD~I~~ 153 (167)
.+...+++++.+|.+.+.+.+.+. +..| ++. +...+.|+|++-+.
T Consensus 246 p~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gli~~~~~ 305 (324)
T 3ksx_A 246 RAGSIKTLAQVSGLPPAVVERTLAHRPPASVQPLSAQVIKAQQATADLFYAQRLLPKRVL 305 (324)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHTCCCCCCBCCCHHHHHHHHHHHHHHHHTTSSSSCCC
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHhhcCcCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCc
Confidence 345667888889999999998887 4322 333 44578899986554
No 129
>2i6e_A Hypothetical protein; NYSGXRC,10093B, structural genomics, PSI-2, protein structure initiative; 2.50A {Deinococcus radiodurans} SCOP: c.94.1.1
Probab=32.45 E-value=55 Score=25.94 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHhhhCCCcc-cc----------HHHHHHcCcceEEe
Q 031001 106 EANAESYIELLAKGTGKPKEEIAKDIQRPKY-MQ----------AKEAIVYGLADKII 152 (167)
Q Consensus 106 ~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~-ls----------a~EA~e~GliD~I~ 152 (167)
....+...+.+++++|++++.+.+.+.+-+| ++ ++.+ +.|+|..-+
T Consensus 231 ~~~~~e~~~~~a~~~gl~~~~i~~yl~~~~~~l~~~~~~~l~~~~~~~-~~glip~~~ 287 (301)
T 2i6e_A 231 IGHLAEVSQRHAEKLGLPERVVQHYLWNFRYHLEAPDRLGLREFADLA-VPGHAELTF 287 (301)
T ss_dssp HHTHHHHHHHHHHTTTCCHHHHHHHHHTCBCSCCHHHHHHHHHHHHHH-STTCCCCCC
T ss_pred HHCHHHHHHHHHHHcCCCHHHHHHHHHhCeeCCCHHHHHHHHHHHHHH-hcCCCCCCC
Confidence 3334567788999999999999888865444 22 2235 678887654
No 130
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A*
Probab=31.82 E-value=91 Score=19.33 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...|.++.......+.+.+..
T Consensus 33 q~~lA~~~gis~~~is~~e~g~~~~~~~~l~~ 64 (92)
T 1lmb_3 33 QESVADKMGMGQSGVGALFNGINALNAYNAAL 64 (92)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45689999999999999988776677665543
No 131
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=31.09 E-value=53 Score=26.05 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=33.8
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccc
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAY 58 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aa 58 (167)
||...+.++-|.||+-+.| -.-..+...... ..+.||..+..|..+
T Consensus 193 ~l~~D~~t~~I~l~~E~~~---------~~~~~~~~~~~~--~~~KPVv~~k~G~~~ 238 (288)
T 2nu8_A 193 MFEKDPQTEAIVMIGEIGG---------SAEEEAAAYIKE--HVTKPVVGYIAGVTA 238 (288)
T ss_dssp HHHTCTTCCEEEEEEESSS---------SHHHHHHHHHHH--HCCSCEEEEEECTTC
T ss_pred HHhcCCCCCEEEEEEeeCC---------CHHHHHHHHHHh--cCCCCEEEEEeCCCC
Confidence 5666777889999999888 443444444554 568999999988776
No 132
>2f5x_A BUGD; periplasmic binding protein, transport protein; 1.72A {Bordetella pertussis tohama I}
Probab=30.44 E-value=1.7e+02 Score=23.28 Aligned_cols=43 Identities=21% Similarity=0.348 Sum_probs=30.5
Q ss_pred CCCCCCCCeEEEEc-CCCCCCCCCCCCCCHH-HHHHHHHHHhh-cCCCeEEEEcc
Q 031001 4 DFDNASKPIYLYIN-SSGTQNEKKESVGAET-DAYAIADAMAY-CKSKVYTVNCG 55 (167)
Q Consensus 4 ~~~~~~~~I~l~IN-S~G~~~~~~~~~G~v~-~g~aI~~~i~~-~~~~V~t~~~G 55 (167)
.++-|.+||+|.+- +|| |..+ -+..|.+.|.. ++.+|...+..
T Consensus 11 ~~~~P~kpi~liVp~~~G---------G~~D~~aR~la~~l~~~lg~~vvV~N~p 56 (312)
T 2f5x_A 11 GSEYPERPVNMVVPFAAG---------GPTDNVARSLAESMRPTLGETVVVENKG 56 (312)
T ss_dssp ---CCSSCEEEEESSCTT---------SHHHHHHHHHHHHHHHHHSSCEEEEECC
T ss_pred CCcCCCCCEEEEEeeCCc---------cHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 35678999999995 557 6666 47778888874 56788888863
No 133
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=29.82 E-value=72 Score=18.96 Aligned_cols=32 Identities=13% Similarity=-0.056 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
..-+|+.+|.+...+.++.......+.+.+..
T Consensus 24 q~~lA~~~gis~~~is~~e~g~~~~~~~~l~~ 55 (73)
T 3omt_A 24 NLWLTETLDKNKTTVSKWCTNDVQPSLETLFD 55 (73)
T ss_dssp HHHHHHHTTCCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45689999999999999998777777776654
No 134
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=27.99 E-value=87 Score=17.75 Aligned_cols=32 Identities=13% Similarity=-0.095 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...+.++.......+.+.+..
T Consensus 17 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 48 (66)
T 2xi8_A 17 QSELAALLEVSRQTINGIEKNKYNPSLQLALK 48 (66)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSCCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 35688899999999999888776667665543
No 135
>3vk0_A NHTF, transcriptional regulator; HTH motif, XRE transcription factor, DNA binding protein; 1.88A {Neisseria meningitidis}
Probab=27.08 E-value=92 Score=20.54 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...|.++.......+.+.+..
T Consensus 37 q~elA~~~gis~~~is~~E~G~~~p~~~~l~~ 68 (114)
T 3vk0_A 37 QEELARQCGLDRTYVSAVERKRWNIALSNIEK 68 (114)
T ss_dssp HHHHHHHHTCCHHHHHHHTTTCCCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 46789999999999999988776677665543
No 136
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=25.97 E-value=59 Score=26.15 Aligned_cols=48 Identities=21% Similarity=0.142 Sum_probs=36.6
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhh--cCCCeEEEEccccc
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAY--CKSKVYTVNCGMAY 58 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~--~~~~V~t~~~G~aa 58 (167)
||..++.++-|.||+-+.| -...++.......+. .+.||..+..|..+
T Consensus 201 ~~~~Dp~T~~I~l~~E~~g---------~~e~~~~~f~~~~~~~~~~KPVv~~k~G~s~ 250 (305)
T 2fp4_A 201 IFLNDPATEGIILIGEIGG---------NAEENAAEFLKQHNSGPKSKPVVSFIAGLTA 250 (305)
T ss_dssp HHHHCTTCCEEEEEEESSS---------SHHHHHHHHHHHHSCSTTCCCEEEEEECTTC
T ss_pred HHhcCCCCcEEEEEEecCC---------chhhHHHHHHHHHHHhcCCCCEEEEEecCCc
Confidence 5566667889999999888 555677777777653 36899999988776
No 137
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=25.69 E-value=56 Score=20.72 Aligned_cols=32 Identities=9% Similarity=-0.048 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...|.++.......+.+.+..
T Consensus 25 q~~lA~~~gis~~~is~~e~G~~~p~~~~l~~ 56 (94)
T 2kpj_A 25 QLEIAKSIGVSPQTFNTWCKGIAIPRMGKVQA 56 (94)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSCCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHhCCCCCCHHHHHH
Confidence 45689999999999999888776666665543
No 138
>3dve_B Voltage-dependent N-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.35A {Oryctolagus cuniculus} PDB: 3dvj_B
Probab=25.38 E-value=49 Score=16.59 Aligned_cols=19 Identities=26% Similarity=0.179 Sum_probs=16.2
Q ss_pred CCCHHHHHHHHHHHhhcCC
Q 031001 29 VGAETDAYAIADAMAYCKS 47 (167)
Q Consensus 29 ~G~v~~g~aI~~~i~~~~~ 47 (167)
+|-+++++-|.|-.+..+.
T Consensus 2 VGKiYAallI~d~~r~~k~ 20 (23)
T 3dve_B 2 MGKVYAALMIFDFYKQNKT 20 (26)
T ss_dssp CHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHHhh
Confidence 5889999999999988754
No 139
>3cec_A Putative antidote protein of plasmid maintenance; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.60A {Nostoc punctiforme}
Probab=25.16 E-value=89 Score=20.09 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
..-+|+.+|.+...|.++.......+.+.+..
T Consensus 34 q~~lA~~~gis~~~is~~e~g~~~~~~~~l~~ 65 (104)
T 3cec_A 34 TANFAEILGVSNQTIQEVINGQRSITVDIAIR 65 (104)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCcCCCHHHHHH
Confidence 45689999999999999988777777766543
No 140
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=24.89 E-value=89 Score=22.48 Aligned_cols=31 Identities=13% Similarity=0.017 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 143 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~ 143 (167)
.+-+|+++|.+...+.++.......+.+.+.
T Consensus 27 q~~lA~~~gis~~~is~~e~g~~~p~~~~l~ 57 (192)
T 1y9q_A 27 LDATAQLTGVSKAMLGQIERGESSPTIATLW 57 (192)
T ss_dssp HHHHHHHHSSCHHHHHHHHTTCSCCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 4678999999999999888776666665543
No 141
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=24.14 E-value=1.1e+02 Score=17.96 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+|+.+|.+...+.++.......+.+.+..
T Consensus 26 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 57 (76)
T 3bs3_A 26 NRWLAEQMGKSENTISRWCSNKSQPSLDMLVK 57 (76)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45688999999999999988777777766543
No 142
>2ef8_A C.ECOT38IS, putative transcription factor; helix-turn-helix, DNA binding protein, transcription regulator; HET: CME; 1.95A {Enterobacteria phage P2}
Probab=23.63 E-value=1.3e+02 Score=18.08 Aligned_cols=28 Identities=21% Similarity=0.071 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAK 140 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~ 140 (167)
..-+|+.+|.+...|.++.......+.+
T Consensus 26 q~~lA~~~gis~~~i~~~e~g~~~~~~~ 53 (84)
T 2ef8_A 26 QSELAIFLGLSQSDISKIESFERRLDAL 53 (84)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSSCCBHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHH
Confidence 4568999999999999998877666654
No 143
>2nxo_A Hypothetical protein SCO4506; PFAM, DUF178, NYSGXRC, 10093F, PSI-2, structural genomics, protein structure initiative; 2.04A {Streptomyces coelicolor} SCOP: c.94.1.1
Probab=23.55 E-value=50 Score=25.58 Aligned_cols=24 Identities=21% Similarity=0.145 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCHHHHHhhhCC
Q 031001 110 ESYIELLAKGTGKPKEEIAKDIQR 133 (167)
Q Consensus 110 ~~~~~~~a~~tg~~~~~i~~~~~~ 133 (167)
+...+.+++.+|.+.+.+.+.+.+
T Consensus 223 ~ea~~~~a~~~~~~~~~~~~~~~~ 246 (291)
T 2nxo_A 223 EKVAEQAARWEAFDEDTLAKYFTT 246 (291)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHh
Confidence 455678889999999999887753
No 144
>3f52_A CLP gene regulator (CLGR); helix-turn-helix motif, transcriptional ACTI human pathogen, transcription activator; 1.75A {Corynebacterium glutamicum} PDB: 3f51_A
Probab=23.26 E-value=1.4e+02 Score=19.44 Aligned_cols=43 Identities=9% Similarity=0.044 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 102 AKDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 102 ~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+++.+.+..=..-+|+.+|.+...|.++.......+.+.+..
T Consensus 33 l~~~R~~~glsq~~lA~~~gis~~~is~~E~g~~~~~~~~l~~ 75 (117)
T 3f52_A 33 LRSFRADKGVTLRELAEASRVSPGYLSELERGRKEVSSELLAS 75 (117)
T ss_dssp HHHHHHHHTCCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 3333333333345689999999999999888766666665543
No 145
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=22.87 E-value=1e+02 Score=18.92 Aligned_cols=31 Identities=10% Similarity=0.013 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCc-cccHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPK-YMQAKEAI 143 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~-~lsa~EA~ 143 (167)
.+-+|+.+|.+...|.++..... -.+.+.+.
T Consensus 34 q~elA~~~gis~~~is~~e~g~~~~~~~~~l~ 65 (83)
T 2a6c_A 34 QFKAAELLGVTQPRVSDLMRGKIDLFSLESLI 65 (83)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTCGGGCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHH
Confidence 46789999999999999988776 46766554
No 146
>3eus_A DNA-binding protein; structural genomics, PSI2,MCSG, protein structure initiative, midwest center for structural genomic binding; 1.80A {Silicibacter pomeroyi}
Probab=22.60 E-value=1.4e+02 Score=18.51 Aligned_cols=32 Identities=25% Similarity=0.177 Sum_probs=26.0
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIV 144 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e 144 (167)
.+-+++.+|.+...|.++.......+.+....
T Consensus 30 q~elA~~~gis~~~is~~E~G~~~p~~~~l~~ 61 (86)
T 3eus_A 30 QADLAERLDKPQSFVAKVETRERRLDVIEFAK 61 (86)
T ss_dssp HHHHHHHTTCCHHHHHHHHTTSSCCBHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHH
Confidence 45789999999999999988777777776543
No 147
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=21.95 E-value=1.1e+02 Score=22.54 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccc
Q 031001 9 SKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAY 58 (167)
Q Consensus 9 ~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aa 58 (167)
.++|.|.+.+++. .+..+...+...++..+.+|+++..|.-.
T Consensus 106 ~~riiil~~~~~~--------~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~ 147 (192)
T 2x5n_A 106 RQRIVAFVGSPIV--------EDEKNLIRLAKRMKKNNVAIDIIHIGELQ 147 (192)
T ss_dssp EEEEEEEECSCCS--------SCHHHHHHHHHHHHHTTEEEEEEEESCC-
T ss_pred CceEEEEEECCCC--------CCchhHHHHHHHHHHCCCEEEEEEeCCCC
Confidence 3467777777661 34666778888899999999999888643
No 148
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=21.89 E-value=2.3e+02 Score=20.51 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=21.8
Q ss_pred HHHHHHH-hCCCHHHHHhhhCCCccccHHHHH
Q 031001 113 IELLAKG-TGKPKEEIAKDIQRPKYMQAKEAI 143 (167)
Q Consensus 113 ~~~~a~~-tg~~~~~i~~~~~~~~~lsa~EA~ 143 (167)
.+.+|.. .|+++++|++.+.=..-||++|--
T Consensus 126 c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~ 157 (169)
T 3v7d_A 126 CKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEA 157 (169)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHH
Confidence 3444444 489999999998755558887643
No 149
>2qpq_A Protein BUG27; alpha/beta domain, venus flytrap, transport protein; HET: CIT; 1.92A {Bordetella pertussis}
Probab=21.84 E-value=2.9e+02 Score=21.64 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=28.6
Q ss_pred CCCCCeEEEEc-CCCCCCCCCCCCCCHH-HHHHHHHHHhh-cCCCeEEEEcc
Q 031001 7 NASKPIYLYIN-SSGTQNEKKESVGAET-DAYAIADAMAY-CKSKVYTVNCG 55 (167)
Q Consensus 7 ~~~~~I~l~IN-S~G~~~~~~~~~G~v~-~g~aI~~~i~~-~~~~V~t~~~G 55 (167)
-|.+||+|.+- +|| |..+ -+..|.+.|.. ++.+|...+..
T Consensus 5 ~P~~pi~~ivp~~~G---------G~~D~~aR~la~~l~~~lg~~vvV~n~~ 47 (301)
T 2qpq_A 5 FPNKPLDIIVTFPPG---------GGTDMLARLIGNYLTESLGQTAVVENRP 47 (301)
T ss_dssp -CCSCEEEEESSCTT---------SHHHHHHHHHHHHHHHGGGSCEEEEECC
T ss_pred CCCCCEEEEEccCCC---------cHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 37899999995 567 6555 66777777774 56788888763
No 150
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=21.29 E-value=79 Score=25.20 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=31.2
Q ss_pred CcCCCCCCCCeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhhcCCCeEEEEccccc
Q 031001 2 WLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAY 58 (167)
Q Consensus 2 ~L~~~~~~~~I~l~INS~G~~~~~~~~~G~v~~g~aI~~~i~~~~~~V~t~~~G~aa 58 (167)
||...+.++-|.||+-+.| -.-..+.+.... ...++||..+..|..+
T Consensus 200 ~~~~D~~T~~I~l~~E~~~---------~~~~~~~~~~~~-~~~~KPVv~~k~G~s~ 246 (297)
T 2yv2_A 200 LFQEDPQTEALVLIGEIGG---------DMEERAAEMIKK-GEFTKPVIAYIAGRTA 246 (297)
T ss_dssp HHHTCTTCSEEEEEECSSS---------SHHHHHHHHHHT-TSCCSCEEEEESCCC-
T ss_pred HHhcCCCCCEEEEEEeeCC---------CHHHHHHHHHHh-ccCCCCEEEEEeCCCC
Confidence 5667777889999999876 222233333332 1457899999999776
No 151
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=21.23 E-value=94 Score=22.88 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHHHc
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAIVY 145 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~ 145 (167)
.+-+|+.+|+|+.-+....-.-..+++++|...
T Consensus 29 we~IAe~iG~S~v~vtaa~lGQ~~ls~e~A~kL 61 (156)
T 1dw9_A 29 FAEIADGTGLAEAFVTAALLGQQALPADAARLV 61 (156)
T ss_dssp HHHHHTTSSSCHHHHHHHHTTSSCCCHHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHH
Confidence 466899999999999999999999999998764
No 152
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=21.11 E-value=89 Score=19.47 Aligned_cols=31 Identities=13% Similarity=-0.096 Sum_probs=23.8
Q ss_pred HHHHHHHhCCCHHHHHhhhCCCccccHHHHH
Q 031001 113 IELLAKGTGKPKEEIAKDIQRPKYMQAKEAI 143 (167)
Q Consensus 113 ~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~ 143 (167)
.+-+|+.+|.+...|.++.......+.+.+.
T Consensus 29 q~~lA~~~gis~~~is~~e~g~~~p~~~~l~ 59 (91)
T 1x57_A 29 QKDLATKINEKPQVIADYESGRAIPNNQVLG 59 (91)
T ss_dssp HHHHHHHHTSCHHHHHHHHHTCSCCCHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHH
Confidence 4568999999999999888766666666543
No 153
>3op9_A PLI0006 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, transcription regulat; HET: MSE; 1.90A {Listeria innocua}
Probab=20.47 E-value=1.3e+02 Score=19.59 Aligned_cols=40 Identities=8% Similarity=-0.047 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHhhhCCCccccHHHH
Q 031001 103 KDLEANAESYIELLAKGTGKPKEEIAKDIQRPKYMQAKEA 142 (167)
Q Consensus 103 ~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA 142 (167)
+.+.+.+..=.+-+|+.+|.+...+.++....+..+.+..
T Consensus 15 ~~~r~~~glsq~~lA~~~gis~~~i~~~e~g~~~p~~~~l 54 (114)
T 3op9_A 15 SRLKKEHGLKNHQIAELLNVQTRTVAYYMSGETKPDIEKL 54 (114)
T ss_dssp HHHHHHHTCCHHHHHHHHTSCHHHHHHHHHTSSCCCHHHH
T ss_pred HHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHH
Confidence 3333333333456788888888888887776655665544
Done!