BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031006
MLLALALAFLSISGDDDDMGIIKRGRFISSSSDGGSFPFLHGPHRKLLLRSAKTKAAKKK
EPERWGERCTKEDIVITQGPTGIMPNGIPTYTVEIMNACETGCNISEIHLNCGWFSSAHL
INHKILKRLSYNDCLVNEGKPLVSGGTLKFQYANTFLYPLTVSSVVC

High Scoring Gene Products

Symbol, full name Information P value
TPD1
AT4G24972
protein from Arabidopsis thaliana 4.1e-33
AT1G32583 protein from Arabidopsis thaliana 1.1e-32
AT4G32090 protein from Arabidopsis thaliana 1.1e-05
AT4G32110 protein from Arabidopsis thaliana 1.9e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031006
        (167 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1006230300 - symbol:TPD1 "AT4G24972" species:3...   361  4.1e-33   1
TAIR|locus:1009023131 - symbol:AT1G32583 "AT1G32583" spec...   357  1.1e-32   1
TAIR|locus:2116702 - symbol:AT4G32090 species:3702 "Arabi...   102  1.1e-05   1
TAIR|locus:2116612 - symbol:AT4G32110 species:3702 "Arabi...   100  1.9e-05   1


>TAIR|locus:1006230300 [details] [associations]
            symbol:TPD1 "AT4G24972" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0001709 "cell fate determination"
            evidence=IMP] [GO:0048653 "anther development" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0048653 GO:GO:0001709 EMBL:AY394846
            IPI:IPI00526307 RefSeq:NP_974612.1 UniGene:At.47965 DIP:DIP-29700N
            IntAct:Q6TLJ2 EnsemblPlants:AT4G24972.1 GeneID:2745725
            KEGG:ath:AT4G24972 TAIR:At4g24972 eggNOG:NOG325440
            HOGENOM:HOG000077765 InParanoid:Q6TLJ2 OMA:RIHINCG
            ProtClustDB:CLSN2915210 Genevestigator:Q6TLJ2 Uniprot:Q6TLJ2
        Length = 176

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 67/107 (62%), Positives = 77/107 (71%)

Query:    61 EPERWGERCTKEDIVITQGPTGIMPNGIPTYTVEIMNACETGCNISEIHLNCGWFSSAHL 120
             EPER GE+C   DIV+ Q  T  MPNGIP Y VEI N C +GC IS IH+NCGWFSSA L
Sbjct:    69 EPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKL 128

Query:   121 INHKILKRLSYNDCLVNEGKPLVSGGTLKFQYANTFLYPLTVSSVVC 167
             IN ++ KR+ Y+DCLVN GKPL  G TL F YANTF Y L+V+ V C
Sbjct:   129 INPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175


>TAIR|locus:1009023131 [details] [associations]
            symbol:AT1G32583 "AT1G32583" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009408 "response to heat"
            evidence=IEP] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009408
            EMBL:DQ487503 IPI:IPI00656613 RefSeq:NP_001031128.1
            UniGene:At.49435 EnsemblPlants:AT1G32583.1 GeneID:3766880
            KEGG:ath:AT1G32583 TAIR:At1g32583 OMA:VEIFNSC PhylomeDB:Q1G3T1
            Genevestigator:Q2V4J6 Uniprot:Q1G3T1
        Length = 179

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 60/104 (57%), Positives = 84/104 (80%)

Query:    64 RWGERCTKEDIVITQGPTGIMPNGIPTYTVEIMNACETGCNISEIHLNCGWFSSAHLINH 123
             R G+ C+K+DIV+ QG T  +P+G+P+YTVEI N+C + CNI+EIH++CGWFSS  L+N 
Sbjct:    75 RIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNP 134

Query:   124 KILKRLSYNDCLVNEGKPLVSGGTLKFQYANTFLYPLTVSSVVC 167
             ++ +RL Y+DCLVN+G+PL  G +L FQYAN+F YPL+V+SV C
Sbjct:   135 RVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178


>TAIR|locus:2116702 [details] [associations]
            symbol:AT4G32090 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] InterPro:IPR002659 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006486 GO:GO:0008378
            EMBL:AL021636 EMBL:AL161580 PANTHER:PTHR11214 IPI:IPI00538727
            PIR:T04636 RefSeq:NP_194937.1 UniGene:At.63745
            EnsemblPlants:AT4G32090.1 GeneID:829340 KEGG:ath:AT4G32090
            TAIR:At4g32090 eggNOG:NOG262319 HOGENOM:HOG000243728
            InParanoid:O49383 OMA:ATAQFTY PhylomeDB:O49383
            ProtClustDB:CLSN2686018 Genevestigator:O49383 Uniprot:O49383
        Length = 124

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 28/85 (32%), Positives = 41/85 (48%)

Query:    69 CTKEDIVITQGPTGIMPNGIPTYTVEIMNACETGCNISEIHLNCGWFSSAHLINHKILKR 128
             CT   I I    TG    G P + V ++N C   C    + L+CG F+ A  +   +L+ 
Sbjct:    24 CTFGKIQIGAVRTGREIGGQPEWKVTVINTCN--CFQKHVTLSCGGFAPAKPVKPLLLQP 81

Query:   129 LSYNDCLVNEGKPLVSGGTLKFQYA 153
                N CL+ +G  L +G T +F YA
Sbjct:    82 QG-NTCLMIKGAALPAGATAQFTYA 105


>TAIR|locus:2116612 [details] [associations]
            symbol:AT4G32110 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISS] InterPro:IPR002659
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006486
            GO:GO:0008378 PANTHER:PTHR11214 HOGENOM:HOG000243728 EMBL:BT014801
            EMBL:BT015698 IPI:IPI00518123 RefSeq:NP_680754.1 UniGene:At.49722
            EnsemblPlants:AT4G32110.1 GeneID:829343 KEGG:ath:AT4G32110
            TAIR:At4g32110 eggNOG:NOG324125 InParanoid:Q6ID72 PhylomeDB:Q6ID72
            ProtClustDB:CLSN2689712 Genevestigator:Q6ID72 Uniprot:Q6ID72
        Length = 124

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 30/105 (28%), Positives = 48/105 (45%)

Query:    65 WGERCTKEDIVITQGPTGIMPNGIPTYTVEIMNACETGCNISEIHLNCGWFSSAHLINHK 124
             +G+ C+   + + Q  TG +    P + V + N C   C      L C  F+S   I+  
Sbjct:    22 YGD-CSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNN-CKFQNTELLCVGFNSVTPIDTS 79

Query:   125 ILKRLSYNDCLVNEGKPLVSGGTLKFQYANTFLYPLTVSS--VVC 167
             +L + S + CLVN GK +V    + F+Y     + L V    +VC
Sbjct:    80 LLLK-SGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.442    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      167       139   0.00091  102 3  11 22  0.43    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  152 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.17u 0.09s 12.26t   Elapsed:  00:00:01
  Total cpu time:  12.17u 0.09s 12.26t   Elapsed:  00:00:01
  Start:  Fri May 10 07:44:23 2013   End:  Fri May 10 07:44:24 2013

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