Citrus Sinensis ID: 031009

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVPSCFIGL
Secondary Structure (PSIPRED)
cccccccccEEEEEcccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHHcccEEEccccHHHHHHHHHHccccEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEEcccccEEEEccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHccccEEEEcccccccccccEEEEEEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
masnaaincsiidfssknhqliftslpiphcrygsstvrfRRNCFSlrasksyhspiiradssssssssssvkrepmlppynvlitgsTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFgeqhvwvppsrlvsapyniIYKYSWLLVNIYvpscfigl
Flexible Loop (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLrasksyhspiiradssssssssssvkrepmlppyNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEfgeqhvwvppsrlvsAPYNIIYKYSWLLVNIYVPSCFIGL
Low Complexity Region (SEG)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADssssssssssVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVPSCFIGL
Disordered region (IsUnstruct)
*****AINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRA******************************PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVPSCFI**
Disordered Region (DISOPRED)
******I*CSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHS*************************YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVPSCFIGL
Disordered Region (DISEMBL)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPI******************PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVPSCFIGL
Disordered Region (DISPRO)
**SNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYH***********************LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVPSCFIGL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNAAINCSIIDFSSKNHQLIFTSLPIPHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVPSCFIGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
Q8LEU3	348	Chlorophyll(ide) b reduct	yes	no	0.628	0.301	0.584	1e-27
Q84ST4	343	Chlorophyll(ide) b reduct	yes	no	0.449	0.218	0.714	2e-26
Q93ZA0	496	Probable chlorophyll(ide)	no	no	0.305	0.102	0.568	8e-10
Q5N800	504	Probable chlorophyll(ide)	no	no	0.305	0.101	0.549	4e-08
P0A9P9	254	Gluconate 5-dehydrogenase	N/A	no	0.395	0.259	0.373	2e-06
P0A9Q0	254	Gluconate 5-dehydrogenase	yes	no	0.395	0.259	0.373	2e-06
Q13268	258	Dehydrogenase/reductase S	yes	no	0.359	0.232	0.383	1e-05
Q9BTZ2	278	Dehydrogenase/reductase S	no	no	0.407	0.244	0.391	2e-05
Q5RCF8	278	Dehydrogenase/reductase S	no	no	0.407	0.244	0.391	2e-05
P39577	252	Uncharacterized oxidoredu	yes	no	0.251	0.166	0.547	3e-05

>sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 76/113 (67%), Gaps = 8/113 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HVW
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVW 132

Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4

>sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 118 DSAVQSLREEFGEQHVW 134
           +SAV  L++EFGEQHVW
Sbjct: 111 ESAVTDLKKEFGEQHVW 127

Required for chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           P NV+ITGST+G+G ALA+EFL +GD VI+ SRS+E VD  V+ L +   E
Sbjct: 161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKE 211

Involved in chlorophyll b degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E
Sbjct: 170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQE 220

Required for proper chloroplast degradation. Involved in chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|P0A9P9|IDNO_ECOLI Gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnO PE=3 SV=1

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 9/75 (12%)

Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPP 137
           L   N+LITGS +GIG+ LA    K G  +II   +AER + AV+ L +E          
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQE---------G 57

Query: 138 SRLVSAPYNIIYKYS 152
            + V+AP+N+ +K+ 
Sbjct: 58  IQAVAAPFNVTHKHE 72

Catalyzes a reversible reduction of 5-ketoglutanate to form D-gluconate. Dependent on NADP, almost inactive with NAD.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 9

>sp|P0A9Q0|IDNO_ECOL6 Gluconate 5-dehydrogenase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=idnO PE=3 SV=1

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 9/75 (12%)

Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPP 137
           L   N+LITGS +GIG+ LA    K G  +II   +AER + AV+ L +E          
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQE---------G 57

Query: 138 SRLVSAPYNIIYKYS 152
            + V+AP+N+ +K+ 
Sbjct: 58  IQAVAAPFNVTHKHE 72

Catalyzes a reversible reduction of 5-ketoglutanate to form D-gluconate. Dependent on NADP, almost inactive with NAD.

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 9

>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           SS+ + R+ +L     ++TGST GIG+A+A+   + G +V+I SR  + VD A+  L+ E
Sbjct: 2   SSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGE 61

Displays NADPH-dependent dicarbonyl reductase activity in vitro with 3,4-Hexanedione, 2,3-Heptanedione and 1-Phenyl-1,2-propanedione as substrates. No reductase activity is displayed in vitro with steroids, retinoids and sugars as substrates. May inhibit cell replication.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 119 SAVQSLREE 127
            AV +L+ E
Sbjct: 71  QAVATLQGE 79

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 59  RADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
           RA +S   +SS   +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD
Sbjct: 12  RAWNSVRMASSGMTRRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVD 70

Query: 119 SAVQSLREE 127
            AV +L+ E
Sbjct: 71  QAVATLQGE 79

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P39577|DLTE_BACSU Uncharacterized oxidoreductase DltE OS=Bacillus subtilis (strain 168) GN=dltE PE=3 SV=2

 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 27/42 (64%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           VLITG + GIG  LAK  L+ G+ VIIC RS  R+  A Q L
Sbjct: 8   VLITGGSAGIGLELAKRLLELGNEVIICGRSEARLAEAKQQL 49

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
255546781	325	short-chain dehydrogenase, putative [Ric	0.413	0.212	0.898	4e-29
224097534	370	predicted protein [Populus trichocarpa]	0.431	0.194	0.762	6e-27
356556680	349	PREDICTED: chlorophyll(ide) b reductase	0.502	0.240	0.688	3e-26
10178029	341	unnamed protein product [Arabidopsis tha	0.628	0.307	0.584	6e-26
18414726	348	chlorophyll(ide) b reductase NOL [Arabid	0.628	0.301	0.584	7e-26
357115706	554	PREDICTED: chlorophyll(ide) b reductase	0.485	0.146	0.666	2e-25
449446317	352	PREDICTED: chlorophyll(ide) b reductase	0.371	0.176	0.838	5e-25
297806477	349	short-chain dehydrogenase/reductase fami	0.622	0.297	0.608	8e-25
75298085	343	RecName: Full=Chlorophyll(ide) b reducta	0.449	0.218	0.714	1e-24
238013532	341	unknown [Zea mays] gi|413933565|gb|AFW68	0.580	0.284	0.555	5e-24

>gi|255546781|ref|XP_002514449.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223546445|gb|EEF47945.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 66/69 (95%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           S SSSSV REPM+ PYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV+SAVQ+LR
Sbjct: 58  SQSSSSVNREPMVSPYNVLITGSTKGIGYALAKEFLKAGDNVMICSRSAERVESAVQNLR 117

Query: 126 EEFGEQHVW 134
           EEFGEQHVW
Sbjct: 118 EEFGEQHVW 126

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097534|ref|XP_002310976.1| predicted protein [Populus trichocarpa] gi|222850796|gb|EEE88343.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/80 (76%), Positives = 69/80 (86%), Gaps = 8/80 (10%)

Query: 64  SSSSSSSSVKREPMLPPYNVLITGSTK--------GIGYALAKEFLKAGDNVIICSRSAE 115
           + +SSSS++ REPMLPP+N+LITGSTK        GIGYALAKEFLKAGDNVIICSRSAE
Sbjct: 73  AQTSSSSALSREPMLPPFNILITGSTKELVDAFNPGIGYALAKEFLKAGDNVIICSRSAE 132

Query: 116 RVDSAVQSLREEFGEQHVWV 135
           RV+SAVQSLREEFGEQ VW+
Sbjct: 133 RVESAVQSLREEFGEQRVWL 152

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556680|ref|XP_003546651.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Glycine max]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 71/93 (76%), Gaps = 9/93 (9%)

Query: 43  NCFSLRAS-KSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFL 101
           N  S+ AS K+  SPI  A +S         K EPMLPP+NVLITGSTKGIGYALAKEFL
Sbjct: 49  NTLSVSASRKNSTSPIFLATASG--------KSEPMLPPFNVLITGSTKGIGYALAKEFL 100

Query: 102 KAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           KAGDNV+ICSRS ERV +AVQ+LR EFGEQHVW
Sbjct: 101 KAGDNVLICSRSDERVKTAVQNLRVEFGEQHVW 133

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10178029|dbj|BAB11512.1| unnamed protein product [Arabidopsis thaliana]

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 76/113 (67%), Gaps = 8/113 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HVW
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVW 132

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414726|ref|NP_568145.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana] gi|75301367|sp|Q8LEU3.1|NOL_ARATH RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=AtNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|21553369|gb|AAM62462.1| unknown [Arabidopsis thaliana] gi|94442407|gb|ABF18991.1| At5g04900 [Arabidopsis thaliana] gi|134254417|dbj|BAF49742.1| short-chain dehydrogenase/reductase AtNOL1 [Arabidopsis thaliana] gi|332003419|gb|AED90802.1| chlorophyll(ide) b reductase NOL [Arabidopsis thaliana]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 76/113 (67%), Gaps = 8/113 (7%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPY 81
           T LP   P CR      R     F L         +    SS++  +  S KREPM PPY
Sbjct: 26  TKLPFLSPICRR-----RLLAERFGLATVVVTRQNLTVTPSSAAVEARISGKREPMTPPY 80

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           N+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE HVW
Sbjct: 81  NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-HVW 132

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357115706|ref|XP_003559627.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Brachypodium distachyon]

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/81 (66%), Positives = 64/81 (79%)

Query: 54  HSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
           H  + R  + + S      +R+PM+PPYNVLITGSTKGIGYALAK+FL AGDNVIICSRS
Sbjct: 46  HRELARIQAEAISGGGGVARRDPMVPPYNVLITGSTKGIGYALAKKFLMAGDNVIICSRS 105

Query: 114 AERVDSAVQSLREEFGEQHVW 134
           AERV+SA   L++EFGEQHVW
Sbjct: 106 AERVESATNDLKKEFGEQHVW 126

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446317|ref|XP_004140918.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus] gi|449494121|ref|XP_004159455.1| PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Cucumis sativus]

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 60/62 (96%)

Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           ++EPM+PPYNVLITGSTKGIGYALA++FLK GDNV+ICSRSAERV+S+VQSLREEFGEQ 
Sbjct: 75  QKEPMVPPYNVLITGSTKGIGYALARQFLKEGDNVVICSRSAERVESSVQSLREEFGEQR 134

Query: 133 VW 134
           VW
Sbjct: 135 VW 136

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806477|ref|XP_002871122.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316959|gb|EFH47381.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 79/115 (68%), Gaps = 11/115 (9%)

Query: 24  TSLPI--PHCRYGSSTVRFRRNCFSL-RASKSYHSPIIRADSSSSSSSSSSVKREPMLPP 80
           T LP   P CR    T RF      + R + S   P      S++  +  S KREPM PP
Sbjct: 26  TQLPFLSPLCRRRLLTERFGLATIVVTRQNLSVTPP------SAAMEARISGKREPMTPP 79

Query: 81  YNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           YNVLITGSTKG IGYALA+EFLKAGDNV+ICSRSAERV+SAVQSL+EEFGE HVW
Sbjct: 80  YNVLITGSTKGFIGYALAREFLKAGDNVVICSRSAERVESAVQSLKEEFGE-HVW 133

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75298085|sp|Q84ST4.1|NOL_ORYSJ RecName: Full=Chlorophyll(ide) b reductase NOL, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1-LIKE; Short=OsNOL; Short=Protein NYC1-LIKE; AltName: Full=Short-chain dehydrogenase/reductase NOL; Flags: Precursor gi|29244639|gb|AAO73232.1| putative oxidoreductase protein [Oryza sativa Japonica Group] gi|50582763|gb|AAT78833.1| putative short chain dehydrogenase (having alternative splicing products) [Oryza sativa Japonica Group] gi|134254415|dbj|BAF49741.1| short-chain dehydrogenase/reductase NOL1 [Oryza sativa Japonica Group] gi|218193420|gb|EEC75847.1| hypothetical protein OsI_12846 [Oryza sativa Indica Group] gi|222625482|gb|EEE59614.1| hypothetical protein OsJ_11943 [Oryza sativa Japonica Group]

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%)

Query: 58  IRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           IRA++       +  +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV
Sbjct: 53  IRAEAVPGGGGVA--RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERV 110

Query: 118 DSAVQSLREEFGEQHVW 134
           +SAV  L++EFGEQHVW
Sbjct: 111 ESAVTDLKKEFGEQHVW 127

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238013532|gb|ACR37801.1| unknown [Zea mays] gi|413933565|gb|AFW68116.1| short-chain dehydrogenase/reductase SDR [Zea mays]

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 72/99 (72%), Gaps = 2/99 (2%)

Query: 36  STVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYA 95
           + +R R+    L A+       +RA++ S        +R+PM PPYNVLITGSTKGIGYA
Sbjct: 29  TRLRSRQERRGLAATGGRGPARVRAETFSGGGGVG--RRDPMAPPYNVLITGSTKGIGYA 86

Query: 96  LAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           LA++FL+AGDNVIICSRSA++V+S V  L+EE+GEQHVW
Sbjct: 87  LARKFLEAGDNVIICSRSAQKVESVVGDLKEEYGEQHVW 125

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
TAIR|locus:2175254	348	NOL "NYC1-like" [Arabidopsis t	0.365	0.175	0.870	3.6e-25
UNIPROTKB|Q84ST4	343	NOL "Chlorophyll(ide) b reduct	0.371	0.180	0.838	2.6e-24
TAIR|locus:2119330	496	NYC1 "NON-YELLOW COLORING 1" [	0.305	0.102	0.568	2.9e-09
UNIPROTKB|Q5N800	504	NYC1 "Probable chlorophyll(ide	0.305	0.101	0.549	2.7e-08
WB|WBGene00000976	257	dhs-13 [Caenorhabditis elegans	0.293	0.190	0.530	3.9e-08
UNIPROTKB|J3QST2	140	DHRS4 "Dehydrogenase/reductase	0.323	0.385	0.381	9e-06
UNIPROTKB|P0A9P9	254	idnO "5-keto-D-gluconate 5-red	0.365	0.240	0.414	2.4e-05
UNIPROTKB|F5GWZ1	155	DHRS4 "Dehydrogenase/reductase	0.323	0.348	0.381	6.9e-05
UNIPROTKB|B4DJS2	157	PECR "Peroxisomal trans-2-enoy	0.251	0.267	0.476	7.8e-05
UNIPROTKB|H7BYG2	170	DHRS4 "Dehydrogenase/reductase	0.323	0.317	0.381	0.00014

TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 54/62 (87%), Positives = 60/62 (96%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             KREPM PPYN+LITGSTKGIGYALA+EFLKAGDNV+ICSRSAERV++AVQSL+EEFGE H
Sbjct:    72 KREPMTPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE-H 130

Query:   133 VW 134
             VW
Sbjct:   131 VW 132

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=IDA

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 52/62 (83%), Positives = 58/62 (93%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             +R  M+PPYNVLITGSTKGIGYALAKEFLKAGDNV+ICSRSAERV+SAV  L++EFGEQH
Sbjct:    66 RRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQH 125

Query:   133 VW 134
             VW
Sbjct:   126 VW 127

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             P NV+ITGST+G+G ALA+EFL +GD VI+ SRS+E VD  V+ L +   E
Sbjct:   161 PRNVVITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKE 211

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IC

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 136 (52.9 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query:    80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             P NV+ITGST+G+G ALA+EFL +GD V+I SRS E V   +  L E   E
Sbjct:   170 PRNVVITGSTRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQE 220

GO:0009536 "plastid" evidence=IDA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0042170 "plastid membrane" evidence=RCA

WB|WBGene00000976 dhs-13 [Caenorhabditis elegans (taxid:6239)]

 Score = 129 (50.5 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 26/49 (53%), Positives = 35/49 (71%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             L+T STKGIG+A+AK+   AG +V++CSR  E VD AV +LR E  + H
Sbjct:    15 LVTASTKGIGFAIAKQLGAAGASVVVCSRKKENVDEAVAALRLENIDAH 63

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|J3QST2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct:     8 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|P0A9P9 idnO "5-keto-D-gluconate 5-reductase" [Escherichia coli K-12 (taxid:83333)]

 Score = 111 (44.1 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 29/70 (41%), Positives = 42/70 (60%)

Query:    82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLV 141
             N+LITGS +GIG+ LA    K G  +II   +AER + AV+ L +E G Q         V
Sbjct:    11 NILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQE-GIQ--------AV 61

Query:   142 SAPYNIIYKY 151
             +AP+N+ +K+
Sbjct:    62 AAPFNVTHKH 71

GO:0000166 "nucleotide binding" evidence=IEA

GO:0046183 "L-idonate catabolic process" evidence=IEA;IEP

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0019521 "D-gluconate metabolic process" evidence=IEA

GO:0008874 "gluconate 5-dehydrogenase activity" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|F5GWZ1 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 6.9e-05, P = 6.9e-05
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct:    26 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 79

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|B4DJS2 PECR "Peroxisomal trans-2-enoyl-CoA reductase" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 7.8e-05, P = 7.8e-05
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query:    84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
             ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+
Sbjct:    22 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQ 63

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|H7BYG2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query:    73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             +R+P+      L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct:     8 RRDPLANKV-ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84ST4	NOL_ORYSJ	1, ., 1, ., 1, ., 2, 9, 4	0.7142	0.4491	0.2186	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00080117	hypothetical protein (370 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.X.5768.1	chlorophyllase (EC-3.1.1.14) (304 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_VI0825	SubName- Full=Putative uncharacterized protein; (372 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_XVI3731	chlorophyll synthetase (EC-2.5.1.62) (329 aa)						•			0.899
	estExt_Genewise1_v1.C_LG_V5276	hypothetical protein (531 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	167
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-12
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-12
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	5e-11
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	6e-11
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-10
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-10
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-10
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-10
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-10
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	6e-10
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-09
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-09
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-09
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-09
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-09
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-09
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	6e-09
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	7e-09
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-08
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-08
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-08
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-08
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-08
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-08
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	4e-08
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-08
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	9e-08
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-07
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-07
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-07
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-07
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-07
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-07
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-07
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	4e-07
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-07
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	5e-07
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	5e-07
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	5e-07
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-07
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	7e-07
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-07
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	9e-07
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-06
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-06
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-06
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-06
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-06
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-06
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	3e-06
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-06
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	4e-06
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-06
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-06
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	7e-06
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-05
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-05
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-05
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-05
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-05
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-05
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-05
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	3e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	3e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-05
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-05
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-05
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	4e-05
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-05
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	4e-05
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	5e-05
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-05
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-05
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	8e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	8e-05
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-04
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-04
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-04
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	1e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-04
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-04
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-04
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-04
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-04
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-04
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-04
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-04
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	3e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	3e-04
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	3e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	4e-04
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	4e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	5e-04
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	5e-04
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	5e-04
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	7e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	7e-04
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-04
TIGR01915	219	TIGR01915, npdG, NADPH-dependent F420 reductase	7e-04
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	8e-04
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	8e-04
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	8e-04
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	9e-04
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	0.001
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	0.001
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	0.001
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	0.001
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	0.001
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	0.001
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	0.001
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.001
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.002
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	0.002
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.002
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	0.002
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	0.002
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	0.002
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.003
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	0.003
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	0.003
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.003
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	0.003
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	0.003
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	0.003
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	0.004
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	0.004
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	0.004
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	0.004

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 61.5 bits (150), Expect = 4e-12
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            L+TG++ GIG A+A+   + G  V++  R+ E +        E  G   V V 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA--IEALGGNAVAVQ 52

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 61.6 bits (150), Expect = 4e-12
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
           VLITG T GIG ALA++FL+AG+ VII  R  ER+  A +
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKK 47

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 58.8 bits (143), Expect = 5e-11
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             L+T ++ GIG A+A+   + G  V IC+R+ E ++ A   LR   G   + V 
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELR-AGGAGVLAVV 56

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 58.8 bits (143), Expect = 6e-11
 Identities = 20/51 (39%), Positives = 30/51 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           V+ITG+  GIG   A+E  K G +VII  R+ E+ + A   +++E G   V
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKV 54

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 16/54 (29%), Positives = 32/54 (59%)

Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
             +     LITG++ GIG  LAK+  + G N+I+ +R  +++++  + L ++ G
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG 55

Length = 265

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             L+TG+++GIG A+A      G  V+I   + E  ++    LR   GE
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE 55

Length = 246

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             ITG   GIG A+AK F + G +V I  R  E +++A + +    G +   + 
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQ 59

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 3e-10
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 7/65 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS 142
            ++TG + GIG A  +  L+AG +V IC R  ER+ SA   LRE+F       P +RL++
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF-------PGARLLA 63

Query: 143 APYNI 147
           A  ++
Sbjct: 64  ARCDV 68

Length = 265

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVW 134
            L     L+TG++ GIG A+A+   + G  V++ +R +E    ++   +++E  G +   
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 135 VP 136
           V 
Sbjct: 62  VA 63

Length = 251

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 21/50 (42%), Positives = 29/50 (58%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            VLITG++ GIG A A+ F KAG  +I+  R AER+      L  +F  +
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVK 51

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            LITG +KGIG+A+A+  L  G  V I +R  + ++ A   L  +
Sbjct: 9   ALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK 53

Length = 237

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 55.9 bits (135), Expect = 6e-10
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
           +LITG   GIG ALAK FL+ G+ VIIC R+ ER+  A  
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA 47

Length = 245

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
           VLITG + GIG ALA      G  VI  +R+ ++++S  + L +  
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNL 48

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
            L+TG+ +GIG A+A      G  VI+     +   +  + +    G
Sbjct: 9   ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG 55

Length = 251

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG+++GIG A+A +  K G  VII  RS+E      + + EE     V  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE---EGAEEVVEELKAYGVKA 50

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 22/50 (44%), Positives = 32/50 (64%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
           NV++ G T GI   +A+ F +AG NV + SRS E+VD+AV  L++   E 
Sbjct: 11  NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEG 60

Length = 264

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            L+TG TKGIGYA+ +E    G  V  C+R+ + +D  +   RE
Sbjct: 9   ALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWRE 52

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           LITG++KGIG A+A+EFL  G +V+I +R A+ +  A   L EEF E+ V
Sbjct: 13  LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREV 62

Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 52.6 bits (127), Expect = 6e-09
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREE 127
             L+TG+ +GIG+ + ++  K+G   VI+ +R  ER  +AV+ LR E
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE 48

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 52.6 bits (127), Expect = 7e-09
 Identities = 24/45 (53%), Positives = 32/45 (71%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           VLITG + GIG ALAKE +K G NVII +RS  +++ AV+ +  E
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAE 48

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            L+TG+++GIG A A+     G  V IC+R   R+ +A     E
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE 46

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           NVL+T S++GIG+ +A+E LK G  V+I SR+ E ++ A++ L+ E+GE +
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK-EYGEVY 51

Length = 259

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 51.1 bits (123), Expect = 3e-08
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L     LITG++ GIG A A+   +AG  V++ +R  ER    +++L +E G      
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREER----LEALADEIGAGAALA 57

Length = 246

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 20/53 (37%), Positives = 31/53 (58%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
            VLITG++ GIG A A +  +AG  V + +R+ E +D  V  +R + G  H +
Sbjct: 373 VVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAY 425

Length = 657

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V+ITG + G+G A+AK F + G NV+I  R+ E+++ A   + E+F  Q + V 
Sbjct: 4   VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI-EQFPGQVLTVQ 56

Length = 252

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 3e-08
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAV 121
           VL+TG T+GIG  +A+ FL AG  V++C R A E VD   
Sbjct: 9   VLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRP 48

Length = 252

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 4e-08
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           L+TGS++GIGYALA+   +AG  VI+  R   ++ +A +SL+ +    H
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAH 62

Length = 255

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           VL+TG   GIG A+A+ F +AG  V +C  S   + +    L  
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG 57

Length = 264

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+TG+T GIG A+A+   K G  V +C+R  E + + V+ LRE 
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA 50

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 16/42 (38%), Positives = 30/42 (71%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           L+TGS +G+G+ +A+    AG +V++  R+A  +++AV +LR
Sbjct: 15  LVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR 56

Length = 256

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 9e-08
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG+  GIG  +A    K G  V+I   + E   +A ++L++ 
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA 51

Length = 258

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.4 bits (119), Expect = 1e-07
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            ++TG++ GIG  +A+ F   G  V++  R+ E  +     +   
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG 52

Length = 251

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 18/47 (38%), Positives = 29/47 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           VLITG++KGIG A A+ F   G ++ + +R A+ +++    LR   G
Sbjct: 10  VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG 56

Length = 259

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 17/50 (34%), Positives = 28/50 (56%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           +      LITG++ GIG A A  F KAG ++ + +RS + +++    LR 
Sbjct: 3   LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS 52

Length = 241

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           VL+TG ++GIG  +A+ FL+AG  VII +R AE    A + L   +GE
Sbjct: 9   VLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL-SAYGE 55

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            L+TG+  GIG A+A+    AG NV++     E  ++A +   +  G 
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGS 51

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 4/45 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           VLITG++ GIG ALA+EF KAG NV + +R  +R+D     L+ E
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLD----ELKAE 41

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 22/46 (47%), Positives = 30/46 (65%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           N+LITGS +GIG+ LA    + G  +II   +AER + AV  LR+E
Sbjct: 11  NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE 56

Length = 254

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRS--AERVDSAVQSLREEFGEQHVW 134
           VLITG T G+G ALA+     G  ++++ SR   A      V  L     E  V 
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVA 57

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 4e-07
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+ G + GIG ALA+ F   G  V I SRS +R+ +A ++L  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG 43

Length = 230

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            LITG T GIG   A++FL  G  V I  R    +++A    R E GE    V
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAA----RAELGES-ALV 56

Length = 249

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+ITG++ GIG  LA    + G  +++ +R  ER++       E 
Sbjct: 6   VIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLEL 50

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
             +ITG   GIG A AK  LK G  V I  R+      A   L+    + 
Sbjct: 2   VAIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKV 49

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 5e-07
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           V+ITG+++GIG ALA    +AG  +++ +R+  R+ S  Q L +  GE  V  
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVP 56

Length = 263

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 6e-07
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 76  PMLPPYN---VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            ML P     V+ITG++ G+G A A+ F + G  V++ +R  E +++    +R   G + 
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIR-AAGGEA 59

Query: 133 VWVP 136
           + V 
Sbjct: 60  LAVV 63

Length = 334

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 47.2 bits (113), Expect = 7e-07
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            L+TG+++GIG A+A      G  V +  RS E     V+ ++ 
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA 46

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 8e-07
 Identities = 14/50 (28%), Positives = 21/50 (42%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            L+TG+ +G+G A A+   +AG  V      A        +L    G  H
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAH 59

Length = 250

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 9e-07
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            +LITG++ G+G  +A+EF   G ++ +C+R  +R++     L+ E   ++
Sbjct: 4   KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE----ELKAELLARY 50

Length = 248

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+T ST GIG A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct: 14  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE 57

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            VL+TG++ GIG ALA+    AG  +++  R+AE++++    L   +  +H WV
Sbjct: 7   RVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL--PYPGRHRWV 58

Length = 263

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 17/46 (36%), Positives = 31/46 (67%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             L+TG+++GIG+ +A    +AG N++I SR+ E+ + A Q + +E
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE 52

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 20/49 (40%), Positives = 34/49 (69%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            ++TG+T GIG A A+E  K G NVI+ SR+ E++D+  + + E++G +
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVE 52

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           LITG++ GIG+A+AK + KAG  ++    + E VD  + + RE 
Sbjct: 14  LITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL 57

Length = 265

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           VL+TG+ +GIGYA+A+   +AG  V    R+ E++   V  LR 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRR 44

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
           VL+TG+T G G  + + F++ G  VI   R  ER    +Q L++E G+ 
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDN 47

Length = 248

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREE 127
            L+TG+ +G+G A+A    +AG +V++      E  +  V+++   
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL 54

Length = 249

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V+ITG++ GIG A A  F + G  V++ +RSAE +    + +R E G + + V 
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVR-ELGGEAIAVV 55

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFG 129
           L+TGST GIG  +A+    AG N+++     A  +++    L  + G
Sbjct: 6   LVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHG 52

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 27/76 (35%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------------------------- 115
           N LITG+ +GIG A+A    K G NV + +R+ E                          
Sbjct: 9   NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY 68

Query: 116 -RVDSAVQSLREEFGE 130
             V +A++ L+ E G 
Sbjct: 69  EEVTAAIEQLKNELGS 84

Length = 239

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 44.1 bits (105), Expect = 7e-06
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            +ITG    +G A+AKE  +AG  V I  R+ E+ ++ V  ++   GE
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE 60

Length = 278

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLRE 126
            L+TG T+G+G A+A+ F + G   ++IC R+AE+ ++    L  
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA 53

Length = 260

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 83  VLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+T +   GIG A A+  L+ G  V+I      R+      L  E G   V
Sbjct: 20  VLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRV 71

Length = 262

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           +LITG+ + IG ALA   L  G  VI+  R+      A+  LR+
Sbjct: 5   ILITGAGQRIGLALAWHLLAQGQPVIVSYRT-HY--PAIDGLRQ 45

Length = 236

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 16/44 (36%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             T S+KGIG+ +A+   +AG +VI+ SR+ E +  A + ++ E
Sbjct: 12  FTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE 55

Length = 263

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             LITG T+GIG A+A+ FL+ G  V +   SAE   +  + LRE+   
Sbjct: 9   VALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE---NEAKELREKGVF 54

Length = 255

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 16/50 (32%), Positives = 30/50 (60%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
             ++TG ++GIG A+A+   +AG +V I   SA R +   + L +++G +
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVK 59

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
             L+TG+++GIG A+A+     G NV+I   S+E    A+ +     G
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG 54

Length = 248

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
             +ITG T  +G A+A+   +AG  V    R+ E+ D   + +    G 
Sbjct: 7   VAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGR 55

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            LITG   G+G AL + F+  G  V +  RSAE+    V  LR +FG+
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK----VAELRADFGD 50

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           +ITG++ GIG A AK F + G  V++ +R    +D  V  +R E GE   
Sbjct: 10  IITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVA 59

Length = 254

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 3/51 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG ++G+G A+A+ F + G  V++    +E    A ++L +E G++ +
Sbjct: 8   VLVTGGSRGLGAAIARAFAREGARVVVNYHQSE---DAAEALADELGDRAI 55

Length = 253

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 16/51 (31%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG+++G+G A+A+ F + G  V++    +   +SA +++  E GE+ +
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRST--ESA-EAVAAEAGERAI 50

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPS 138
            L+TG   GIG  +A   + AG  V+I  R+ +++ +A + +    G   V   P+
Sbjct: 10  YLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPA 65

Length = 276

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLRE 126
            LP    L+TGS++GIG   AK    AG +V++  R  A R +  V  +  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA 53

Length = 248

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 18/40 (45%), Positives = 23/40 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
           VLITG+T GIG  LA ++ K G  VI C R+   +D    
Sbjct: 4   VLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT 43

Length = 240

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            LITG   GIG AL + FL  G  V +  RSAE+    + SLR+ FG+
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQRFGD 52

Length = 263

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           V+ITG+  GIG   A+E  + G  VI+  R   + + A   +R +     V V
Sbjct: 4   VIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIV 56

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            L+TG+  GIG A AK     G  V++     E  ++A      E G     + 
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAA----AELGGPDRALG 474

Length = 681

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
             L+TG+ +GIG A+A+ F + G  V +    A   + A  ++  +
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD 54

Length = 260

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 19/133 (14%)

Query: 36  STVRFRRNCFSLRASKSYHSPIIRADSSSS-----SSSSSSVKREPMLPPYNVLI----T 86
           S+ R R +  S   S S  S I  A ++ +     +S  +       +    VLI    +
Sbjct: 3   SSSRLRSSSASSLLSSSSSSSISPALAARAQGSRRASQVAGAAAAAAVEKKKVLIVNTNS 62

Query: 87  GSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE------QHVWVPPSRL 140
           G    IG+ LAKE +KAG  V + +R  E      +     F E      + VW  P+ +
Sbjct: 63  GGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADV 122

Query: 141 VSAP----YNIIY 149
            S      ++++Y
Sbjct: 123 KSKVAGAGFDVVY 135

Length = 378

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            LITG+++GIG A+A+E L     +++  R AER+D     L
Sbjct: 6   ALITGASRGIGAAIARE-LAPTHTLLLGGRPAERLDELAAEL 46

Length = 227

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114
            L+TG TKGIG A     L+AG  V+  +RS 
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTTARSR 43

Length = 260

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           L+TG ++G+G  +A+   +AG  V++ +R AE ++ A   L E  G   +W+ 
Sbjct: 16  LVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHL-EALGIDALWIA 67

Length = 259

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            V I G ++G+GYA+A   LK G  V I SR+  ++    ++L  ++G  H 
Sbjct: 7   KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS-KYGNIHY 57

Length = 238

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVI 108
            VLITG+  GIG A A+ FL  G  V 
Sbjct: 7   TVLITGAASGIGLAQARAFLAQGAQVY 33

Length = 235

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.2 bits (97), Expect = 8e-05
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 11/69 (15%)

Query: 83  VLITGSTKGIGY---ALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSR 139
           VL+TG++ G+G     LA     AG +V+    S  R +     LRE      V V  S 
Sbjct: 136 VLVTGASGGVGRFAVQLAAL---AGAHVVAVVGSPARAE----GLRELGAA-EVVVGGSE 187

Query: 140 LVSAPYNII 148
           L  AP +++
Sbjct: 188 LSGAPVDLV 196

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 8e-05
 Identities = 14/32 (43%), Positives = 24/32 (75%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114
           V+ITG+++G+G A+A + L+ G +VI  SR+ 
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTE 35

Length = 251

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
             L+TG++ GIG A+A     AG NV++  RS E  D+A + + E
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKE--DAAEEVVEE 47

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           +LITG+   IG A  K  L AG  +I+   +A  ++   + L   +  + + +
Sbjct: 5   ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIAL 57

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            L+TG+ KGIG A  K   KAG  V+  SR+   +DS V+
Sbjct: 10  ALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVR 49

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 15/54 (27%), Positives = 25/54 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +ITG+ +GIG A+A+     G N+++   + E    +      E G   V V 
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVG 58

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 18/57 (31%), Positives = 24/57 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPS 138
             ++ G T  +G   A    + G  V++  R  ER   A  SLR  FGE    V  S
Sbjct: 30  TAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS 86

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG+  GIG A  + F +AGD V++    A+R     +   +  G  H 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVV----ADRNVERARERADSLGPDHH 54

Length = 520

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            ITG+++G G A  +  L+ GD V+  +R    +      L E++G++
Sbjct: 7   FITGASRGFGRAWTEAALERGDRVVATARDTATLA----DLAEKYGDR 50

Length = 275

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
               LI G+++G+G  L    L+ G  V    R  ++ D+A+Q+L     E+
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ-DTALQALPGVHIEK 51

Length = 225

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           L+TG  +GIG  +A+    AG ++ I  R  +   +A Q      G + ++ P
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFP 58

Length = 256

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V++TG ++GIG  + + F++ G  V+ C+R      +    L         +VP
Sbjct: 12  VIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP 65

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 16/27 (59%), Positives = 17/27 (62%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           VLITG   GIG  LA EF K G  V+I
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVI 28

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           V ITG  +GIG A A+     G  V I              L
Sbjct: 8   VAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL 49

Length = 273

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
             ++TG   GIG A+A    KAG +V+I    +E  ++   ++++  G+  
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAI 51

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 12/44 (27%), Positives = 27/44 (61%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+TG++ GIG A+A+  ++ G  V+ C+R  +++++     +  
Sbjct: 10  LVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSA 53

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            ++TG++ GIG A+A+   K G  V+I   + +  + A Q L EE  E+  
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVI---AYDINEEAAQELLEEIKEEGG 55

Length = 247

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 65  SSSSSSSVKREPMLP-PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
           S  +S++    P+   P  V ITG  +GIG A+A  F  AGD ++I  R AE      + 
Sbjct: 253 SGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAE----GAKK 308

Query: 124 LREEFGEQHV 133
           L E  G++H+
Sbjct: 309 LAEALGDEHL 318

Length = 520

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 84  LITGSTKGIGYALAKEFLKAGD-NVIICSRSAE--RVDSAVQSLRE 126
           L+TG   GIG ALA+   +     +++  RS      +   Q+L  
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAA 254

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           VLI G+++GIG    +++   G  VI  +R A  +  A+Q+L
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATARDAAALA-ALQAL 44

Length = 222

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
            ++ITG T  IG AL +    AG  V++ SR   + 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKA 36

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 18/71 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV------------------DSAVQSL 124
            LI G+T GIG ALA+     G  +++  R A  +                  +  V +L
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPADVAAELEVWAL 60

Query: 125 REEFGEQHVWV 135
            +E G   + V
Sbjct: 61  AQELGPLDLLV 71

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 13/54 (24%), Positives = 31/54 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           +L+TG+++G+G  +AK +  AG  VI+ +R  ++++    ++ E    +   + 
Sbjct: 9   ILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIR 62

Length = 239

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           +LITG T  IG AL +   K G  V I +RS    
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPG 35

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSL 124
            L+TG+ K IG A+A+     G  V++  +RS          L
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDEL 45

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W  
Sbjct: 7   ILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFI 60

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 25/76 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERV------------------------ 117
           VLITG+++GIG  L ++ L  G+N +I   R                             
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 118 DSAVQSLREEFGEQHV 133
             + +++ E  G+  +
Sbjct: 61  AESAEAVAERLGDAGL 76

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            +ITGS+ GIG   A  F + G  + +  R AER++   QS  +
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQ 49

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 7e-04
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           L+TG   GIG A A  F + G  V++  R A   +  V  +RE  GE
Sbjct: 11  LVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE 57

Length = 253

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 37.8 bits (89), Expect = 7e-04
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE 126
            LITG   G+G ALA+   + G   +++ SRS      A   L E
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAE 47

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 38.3 bits (90), Expect = 7e-04
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVI 108
            V +TG+ +GIGYA+A  F++AG  VI
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVI 36

Length = 252

>gnl|CDD|233635 TIGR01915, npdG, NADPH-dependent F420 reductase

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           + + G T   G  LA    KAG+ +II SR  E+ + A     EE G    
Sbjct: 3   IAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGS 53

This model represents a subset of a parent family described by pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase [Energy metabolism, Electron transport]. Length = 219

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 16/50 (32%), Positives = 31/50 (62%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           ++TG+ +G+G A+A  F +AG +V+I +R+  ++D   + +R      HV
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHV 63

Length = 263

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 6/47 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN--VIICSRSAERVDSAVQSLREE 127
           +++TG+++GIG ALA+E LK G    V++ +RS E     +Q L+EE
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEE----PLQELKEE 44

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFG 129
           ++I+G T+GIG A+  EF ++G N+     S  E  +   + L +++G
Sbjct: 11  LVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG 58

Length = 260

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.0 bits (89), Expect = 9e-04
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           ++ITG  +G+G A+A+   + G  + +   + E+++ AV        E
Sbjct: 8   IVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE 55

Length = 253

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 38.3 bits (89), Expect = 9e-04
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS 142
           ++ITG+  GIG+  A+ F   G +VI+  R+  R  +AV  + EE+ +  V      L S
Sbjct: 4   IIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLAS 63

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 13/36 (36%), Positives = 23/36 (63%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
             +TG+++GIG A+A    KAG  V++ +++A   D
Sbjct: 6   AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGD 41

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 28/81 (34%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------------- 116
           V+ITG + G+G A+A  F K    V+I  RS E                           
Sbjct: 10  VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVE 69

Query: 117 --VDSAVQSLREEFGEQHVWV 135
             V + +Q+  +EFG   V +
Sbjct: 70  SDVVNLIQTAVKEFGTLDVMI 90

Length = 261

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 17/45 (37%), Positives = 25/45 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG+  GIG ALA+ FL AGD V+     A  + +   +L + 
Sbjct: 5   ALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA 49

Length = 257

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 19/36 (52%), Positives = 21/36 (58%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
            VLITG + GIG ALA  F  AG  V   +R AE V
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV 38

Length = 274

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 15/47 (31%), Positives = 28/47 (59%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           L+TG+++GIG A+AK   + G +VI+ SR  +   +   ++    G+
Sbjct: 12  LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK 58

Length = 252

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 18/66 (27%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICS------------------RSAERVDSAVQSL 124
           +++TG + GIG A+ KE L  G NV+                      SAE V+  V  +
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEI 71

Query: 125 REEFGE 130
            E+FG 
Sbjct: 72  IEKFGR 77

Length = 266

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 79  PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            P  V ITG++ GIG ALA+E+ + G  + + +R  + + +    L +
Sbjct: 1   MPLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48

Length = 257

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 17/32 (53%), Positives = 21/32 (65%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114
           VL+TG+TKGIG AL+      G  VI  +RSA
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVIGIARSA 37

Length = 234

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L+TG+++GIG  +A+   + G  V +  R+ E  D A  S    
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPE--DLAALSASGG 45

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117
           M      LITG + G G ALA+  L AG  V+   RS    
Sbjct: 1   MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR 41

Length = 277

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
           +LITG T  IG AL     K G  V I +R   +   
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ 37

Length = 297

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 16/47 (34%), Positives = 28/47 (59%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           L+TG+ +GIG+A+AK  ++ G  V I   + E   +A   L ++ G+
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK 52

Length = 256

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           L+TG++ GIG A A+     G  V I +R  +R+++    L  E G+  V
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALV 56

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V+++G   G+G  LA    +AG +V++ +R+AER+D     + +  G + + VP
Sbjct: 8   VVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVP 60

Length = 258

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           ML    +LITG+   IG AL K  L+AG  VI      E ++  ++SL +EF  + 
Sbjct: 1   MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKK 56

Length = 256

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VL+TG+T  I   + ++ LKAG  V    RS  +       L+       +
Sbjct: 2   VLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRL 52

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           L+TG++ G+G   A+   +AG  V++ SR  ER+      +  E G  HV
Sbjct: 13  LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV 62

Length = 258

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
            +LI G+T  I  A A+ +  AG  + + +R  ER++     LR
Sbjct: 3   KILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLR 46

Length = 243

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR 125
            L+TGS++GIG A+A    + G D  +  +RS +  +   + + 
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE 50

Length = 250

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           L+TG+ +GIG A+A+E L  G  VI    S    D A     EE+G     V
Sbjct: 6   LVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCAKD-WFEEYGFTEDQV 54

Length = 245

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII----CSRSAERVDSAVQSLREEFGEQHV 133
           VLITG + G+G A+A      G +VI+      R     D+    +    G+   
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Length = 249

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V++TG+ +GIG A+A+  L+AG  VI        +      LR  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLT 45

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 62  SSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           ++SSS+SS   +R   L     L+TG   GIG ++ + F K G  V I     +  D   
Sbjct: 3   TASSSASSLPSQR---LLGKVALVTGGATGIGESIVRLFHKHGAKVCI----VDLQDDLG 55

Query: 122 QSLREEFG 129
           Q++ +  G
Sbjct: 56  QNVCDSLG 63

Length = 280

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           ++TG ++G+G ALA++ L+ G  V+  +RS         SL    GE+   V
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRH------PSLAAAAGERLAEV 50

Length = 243

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 4/44 (9%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII----CSRSAERVDSAVQS 123
           L+TG+++GIG A+AK   + G +V++       +AE V + +++
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEA 50

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.66
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.62
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.61
PRK05854	313	short chain dehydrogenase; Provisional	99.55
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.53
KOG0725	270	consensus Reductases with broad range of substrate	99.5
KOG1208	314	consensus Dehydrogenases with different specificit	99.5
PRK08339	263	short chain dehydrogenase; Provisional	99.48
PRK07062	265	short chain dehydrogenase; Provisional	99.46
PRK06197	306	short chain dehydrogenase; Provisional	99.45
PRK07063	260	short chain dehydrogenase; Provisional	99.44
PRK05867	253	short chain dehydrogenase; Provisional	99.44
PRK07478	254	short chain dehydrogenase; Provisional	99.44
PRK08303	305	short chain dehydrogenase; Provisional	99.44
PRK05876	275	short chain dehydrogenase; Provisional	99.44
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.42
PRK06139	330	short chain dehydrogenase; Provisional	99.42
PRK08589	272	short chain dehydrogenase; Validated	99.42
PRK05866	293	short chain dehydrogenase; Provisional	99.41
PRK09186	256	flagellin modification protein A; Provisional	99.4
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.4
PRK08862	227	short chain dehydrogenase; Provisional	99.4
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.4
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.39
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.39
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.39
PRK07791	286	short chain dehydrogenase; Provisional	99.39
PRK07109	334	short chain dehydrogenase; Provisional	99.38
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.38
PLN02780	320	ketoreductase/ oxidoreductase	99.38
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.38
PRK08265	261	short chain dehydrogenase; Provisional	99.38
PRK06194	287	hypothetical protein; Provisional	99.37
PLN02253	280	xanthoxin dehydrogenase	99.37
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.37
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.36
PRK09242	257	tropinone reductase; Provisional	99.36
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.36
PRK06720	169	hypothetical protein; Provisional	99.36
PRK05872	296	short chain dehydrogenase; Provisional	99.35
PRK07035	252	short chain dehydrogenase; Provisional	99.35
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.34
PRK06125	259	short chain dehydrogenase; Provisional	99.34
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.34
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.34
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.34
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.34
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
PRK06114	254	short chain dehydrogenase; Provisional	99.33
PRK07890	258	short chain dehydrogenase; Provisional	99.33
PRK06172	253	short chain dehydrogenase; Provisional	99.33
PRK06128	300	oxidoreductase; Provisional	99.33
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.33
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.32
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.32
PRK07774	250	short chain dehydrogenase; Provisional	99.32
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.32
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.32
PRK05717	255	oxidoreductase; Validated	99.32
PRK07576	264	short chain dehydrogenase; Provisional	99.31
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.31
PRK05599	246	hypothetical protein; Provisional	99.3
PRK07831	262	short chain dehydrogenase; Provisional	99.3
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.3
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.3
PRK08251	248	short chain dehydrogenase; Provisional	99.3
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.3
PRK06196	315	oxidoreductase; Provisional	99.29
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.29
PRK07814	263	short chain dehydrogenase; Provisional	99.29
PRK07825	273	short chain dehydrogenase; Provisional	99.29
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.29
PRK08628	258	short chain dehydrogenase; Provisional	99.28
PRK06701	290	short chain dehydrogenase; Provisional	99.28
PRK07067	257	sorbitol dehydrogenase; Provisional	99.28
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.28
PRK08278	273	short chain dehydrogenase; Provisional	99.27
PRK12939	250	short chain dehydrogenase; Provisional	99.27
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.27
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.27
PRK08643	256	acetoin reductase; Validated	99.27
PRK07904	253	short chain dehydrogenase; Provisional	99.26
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.26
PRK09072	263	short chain dehydrogenase; Provisional	99.26
PRK06138	252	short chain dehydrogenase; Provisional	99.26
PRK07677	252	short chain dehydrogenase; Provisional	99.26
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.26
PRK05875	276	short chain dehydrogenase; Provisional	99.26
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.25
PRK07102	243	short chain dehydrogenase; Provisional	99.25
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.25
PRK07024	257	short chain dehydrogenase; Provisional	99.25
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.25
PRK06500	249	short chain dehydrogenase; Provisional	99.25
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.24
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.24
PRK12747	252	short chain dehydrogenase; Provisional	99.24
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.24
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.23
PRK08226	263	short chain dehydrogenase; Provisional	99.23
PRK07806	248	short chain dehydrogenase; Provisional	99.23
PRK08703	239	short chain dehydrogenase; Provisional	99.22
PRK06949	258	short chain dehydrogenase; Provisional	99.22
PRK06914	280	short chain dehydrogenase; Provisional	99.22
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.22
PRK07454	241	short chain dehydrogenase; Provisional	99.22
PRK12746	254	short chain dehydrogenase; Provisional	99.21
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.21
PRK07985	294	oxidoreductase; Provisional	99.21
PRK06398	258	aldose dehydrogenase; Validated	99.21
PLN03209	576	translocon at the inner envelope of chloroplast su	99.21
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.21
PRK07326	237	short chain dehydrogenase; Provisional	99.2
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.2
PRK09135	249	pteridine reductase; Provisional	99.2
PRK09134	258	short chain dehydrogenase; Provisional	99.2
PRK07856	252	short chain dehydrogenase; Provisional	99.2
PRK06484	520	short chain dehydrogenase; Validated	99.2
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.19
PRK12367	245	short chain dehydrogenase; Provisional	99.19
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.18
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.18
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.18
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.17
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.17
PRK07201	657	short chain dehydrogenase; Provisional	99.17
PRK06484	520	short chain dehydrogenase; Validated	99.17
PRK07832	272	short chain dehydrogenase; Provisional	99.17
PRK06182	273	short chain dehydrogenase; Validated	99.17
PRK12828	239	short chain dehydrogenase; Provisional	99.17
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.17
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.17
PRK05855	582	short chain dehydrogenase; Validated	99.17
PRK09291	257	short chain dehydrogenase; Provisional	99.17
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.17
PRK12937	245	short chain dehydrogenase; Provisional	99.16
PRK08267	260	short chain dehydrogenase; Provisional	99.16
PRK12744	257	short chain dehydrogenase; Provisional	99.16
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.15
PRK05650	270	short chain dehydrogenase; Provisional	99.15
PRK06841	255	short chain dehydrogenase; Provisional	99.15
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.14
PRK06198	260	short chain dehydrogenase; Provisional	99.14
PRK06940	275	short chain dehydrogenase; Provisional	99.14
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.14
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.14
PRK12743	256	oxidoreductase; Provisional	99.14
PRK06180	277	short chain dehydrogenase; Provisional	99.14
PRK06057	255	short chain dehydrogenase; Provisional	99.13
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.13
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.13
PRK12742	237	oxidoreductase; Provisional	99.13
PRK07775	274	short chain dehydrogenase; Provisional	99.13
PRK05993	277	short chain dehydrogenase; Provisional	99.12
PRK06181	263	short chain dehydrogenase; Provisional	99.11
PRK06523	260	short chain dehydrogenase; Provisional	99.11
PRK06483	236	dihydromonapterin reductase; Provisional	99.11
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.11
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.11
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.11
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.1
COG1028	251	FabG Dehydrogenases with different specificities (	99.1
PRK06101	240	short chain dehydrogenase; Provisional	99.1
PRK06179	270	short chain dehydrogenase; Provisional	99.1
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.09
PRK12829	264	short chain dehydrogenase; Provisional	99.09
PRK08264	238	short chain dehydrogenase; Validated	99.08
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.08
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.07
PRK07060	245	short chain dehydrogenase; Provisional	99.07
PLN00015	308	protochlorophyllide reductase	99.07
PRK08263	275	short chain dehydrogenase; Provisional	99.07
PRK07074	257	short chain dehydrogenase; Provisional	99.07
PRK12827	249	short chain dehydrogenase; Provisional	99.06
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.06
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.06
PRK06123	248	short chain dehydrogenase; Provisional	99.06
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.05
PRK07069	251	short chain dehydrogenase; Validated	99.05
PRK05884	223	short chain dehydrogenase; Provisional	99.05
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.05
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.05
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.05
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.04
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.04
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.03
PRK05693	274	short chain dehydrogenase; Provisional	99.03
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.03
PRK10538	248	malonic semialdehyde reductase; Provisional	99.03
PRK06482	276	short chain dehydrogenase; Provisional	99.02
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.02
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	98.99
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.99
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.98
PRK08324	681	short chain dehydrogenase; Validated	98.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.96
PRK07041	230	short chain dehydrogenase; Provisional	98.96
PLN02572	442	UDP-sulfoquinovose synthase	98.96
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.95
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.94
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.93
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.93
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.92
PRK08177	225	short chain dehydrogenase; Provisional	98.91
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.91
PRK06924	251	short chain dehydrogenase; Provisional	98.91
PRK07023	243	short chain dehydrogenase; Provisional	98.9
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.89
PLN02214	342	cinnamoyl-CoA reductase	98.89
PLN02653	340	GDP-mannose 4,6-dehydratase	98.88
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.88
PLN02650	351	dihydroflavonol-4-reductase	98.87
PLN02240	352	UDP-glucose 4-epimerase	98.87
PLN00198	338	anthocyanidin reductase; Provisional	98.87
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.85
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.84
PRK08219	227	short chain dehydrogenase; Provisional	98.84
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.83
PLN02583	297	cinnamoyl-CoA reductase	98.82
PRK06953	222	short chain dehydrogenase; Provisional	98.81
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.8
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.8
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.79
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.79
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.78
PLN02686	367	cinnamoyl-CoA reductase	98.78
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.77
PRK08017	256	oxidoreductase; Provisional	98.76
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.75
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.75
PRK07577	234	short chain dehydrogenase; Provisional	98.74
PLN02427	386	UDP-apiose/xylose synthase	98.72
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.72
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.71
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.69
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.67
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.67
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.64
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	98.59
PRK07578	199	short chain dehydrogenase; Provisional	98.57
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.56
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.55
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.55
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.54
CHL00194	317	ycf39 Ycf39; Provisional	98.53
PRK08309	177	short chain dehydrogenase; Provisional	98.52
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.5
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.42
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.42
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.4
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.36
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.36
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.34
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.33
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.31
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.31
PLN02206	442	UDP-glucuronate decarboxylase	98.31
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.29
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.26
PLN02260	668	probable rhamnose biosynthetic enzyme	98.22
PLN00016	378	RNA-binding protein; Provisional	98.16
PRK07201	657	short chain dehydrogenase; Provisional	98.15
PLN02503	605	fatty acyl-CoA reductase 2	98.14
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.13
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.06
PRK05865	854	hypothetical protein; Provisional	98.05
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.04
PRK12320	699	hypothetical protein; Provisional	98.03
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.0
PRK14982	340	acyl-ACP reductase; Provisional	97.99
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.98
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	97.98
PLN02996	491	fatty acyl-CoA reductase	97.96
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	97.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.95
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	97.94
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.88
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.84
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.82
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	97.76
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.76
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.76
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.74
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.74
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	97.7
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.68
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.64
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.62
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.62
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.58
COG3320	382	Putative dehydrogenase domain of multifunctional n	97.57
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	97.55
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.52
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.52
PLN02778	298	3,5-epimerase/4-reductase	97.49
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.49
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.46
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.46
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	97.44
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.42
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.35
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.35
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.35
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	97.34
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.34
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.29
PRK09620	229	hypothetical protein; Provisional	97.25
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.24
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.22
PRK08223	287	hypothetical protein; Validated	97.19
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.19
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.18
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.15
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.14
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.12
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.11
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	97.09
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.08
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.08
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.06
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	97.01
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.01
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.98
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.95
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.92
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	96.92
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.91
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.9
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.89
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.89
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	96.88
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.87
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	96.87
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.78
PRK08328	231	hypothetical protein; Provisional	96.72
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.67
PRK04148	134	hypothetical protein; Provisional	96.66
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.65
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.62
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.62
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.61
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.59
PRK07411	390	hypothetical protein; Validated	96.57
PRK12480	330	D-lactate dehydrogenase; Provisional	96.52
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.51
COG2910	211	Putative NADH-flavin reductase [General function p	96.51
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.5
PRK14851	679	hypothetical protein; Provisional	96.49
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.48
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.48
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.47
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.45
PRK13243	333	glyoxylate reductase; Reviewed	96.44
PRK06487	317	glycerate dehydrogenase; Provisional	96.42
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.4
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.4
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.39
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.39
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.37
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.37
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.33
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.31
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.31
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
PRK06849	389	hypothetical protein; Provisional	96.3
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.3
PLN02928	347	oxidoreductase family protein	96.3
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.28
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.26
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.26
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.25
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.25
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.24
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.24
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.23
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.21
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.18
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.16
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.16
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.16
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.13
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.12
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.12
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.12
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.11
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.11
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.09
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	96.07
PLN02494	477	adenosylhomocysteinase	96.06
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.05
PRK09496	453	trkA potassium transporter peripheral membrane com	96.03
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.02
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.02
PRK14852	989	hypothetical protein; Provisional	96.0
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.98
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.97
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.96
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.96
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.95
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.93
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	95.91
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.9
PRK06932	314	glycerate dehydrogenase; Provisional	95.88
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	95.88
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.88
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.88
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	95.87
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	95.85
PLN03139	386	formate dehydrogenase; Provisional	95.85
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.83
PRK07574	385	formate dehydrogenase; Provisional	95.79
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.79
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.74
PTZ00325	321	malate dehydrogenase; Provisional	95.73
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.73
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.73
PLN02260	668	probable rhamnose biosynthetic enzyme	95.72
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.71
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.68
PRK08655	437	prephenate dehydrogenase; Provisional	95.64
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.63
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.61
PLN02306	386	hydroxypyruvate reductase	95.61
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.6
PRK09496	453	trkA potassium transporter peripheral membrane com	95.58
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.56
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.51
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.49
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.49
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.49
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	95.48
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.48
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.48
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.47
PRK06436	303	glycerate dehydrogenase; Provisional	95.47
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.47
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.44
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.43
PRK10669	558	putative cation:proton antiport protein; Provision	95.42
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.4
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	95.4
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.39
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.38
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.38
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.36
PRK07877	722	hypothetical protein; Provisional	95.34
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.3
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	95.27
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.27
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.25
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.23
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.22
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.21
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.18
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.16
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.14
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.14
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.14
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.12
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.11
COG3268	382	Uncharacterized conserved protein [Function unknow	95.05
PRK14968	188	putative methyltransferase; Provisional	95.04
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.98
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	94.96
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.96
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	94.9
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.85
PLN00203	519	glutamyl-tRNA reductase	94.81
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	94.7
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	94.68
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.67
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.61
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.6
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	94.59
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.58
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	94.56
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.55
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.51
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	94.48
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	94.47
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	94.47
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	94.46
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	94.42
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.41
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	94.31
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.31
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	94.29
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.26
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.25
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	94.22
TIGR03736	244	PRTRC_ThiF PRTRC system ThiF family protein. A nov	94.21
KOG2015	422	consensus NEDD8-activating complex, catalytic comp	94.18
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.14
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	94.13
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.08
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.07

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.66  E-value=7.8e-16  Score=122.73  Aligned_cols=88  Identities=27%  Similarity=0.358  Sum_probs=75.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .+.+|+++|||||+|||+++|++|+++|++|++++|++++++++.++++...+. ++.++++|+++.+ ......     
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v-~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV-EVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCc-eEEEEECcCCChhHHHHHHHHHHhc
Confidence            577899999999999999999999999999999999999999999999988765 8999999999976 222221     


Q ss_pred             --cceEEEEeccCcccC
Q 031009          151 --YSWLLVNIYVPSCFI  165 (167)
Q Consensus       151 --~~dilvN~ai~~~~~  165 (167)
                        .+|+|||||--.-+.
T Consensus        82 ~~~IdvLVNNAG~g~~g   98 (265)
T COG0300          82 GGPIDVLVNNAGFGTFG   98 (265)
T ss_pred             CCcccEEEECCCcCCcc
Confidence              389999999655443

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.62  E-value=1.5e-15  Score=122.08  Aligned_cols=90  Identities=29%  Similarity=0.253  Sum_probs=76.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh-hhh---
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN-IIY---  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~-~~~---  149 (167)
                      .+..+.||+++|||||+|||.++|++|+++|++++++.|..++++++.+++++.....+++++++|++|.++. .+.   
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            4557999999999999999999999999999999999999999999989998876553599999999998732 221   


Q ss_pred             ----ccceEEEEeccCcc
Q 031009          150 ----KYSWLLVNIYVPSC  163 (167)
Q Consensus       150 ----~~~dilvN~ai~~~  163 (167)
                          ...|+|||||..+.
T Consensus        86 ~~~fg~vDvLVNNAG~~~  103 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISL  103 (282)
T ss_pred             HHhcCCCCEEEecCcccc
Confidence                12899999996554

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.61  E-value=4.6e-15  Score=116.16  Aligned_cols=85  Identities=22%  Similarity=0.245  Sum_probs=70.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~----  150 (167)
                      ..+++|+++||||++|||.++|+.|+++|++|++.+|+.++++++..++.+    ..+.....||+|.+. +.+..    
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~   77 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPE   77 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHH
Confidence            357789999999999999999999999999999999999999988888854    258999999999862 22111    


Q ss_pred             ---cceEEEEeccCccc
Q 031009          151 ---YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 ---~~dilvN~ai~~~~  164 (167)
                         .+|+|||||--.+.
T Consensus        78 ~~g~iDiLvNNAGl~~g   94 (246)
T COG4221          78 EFGRIDILVNNAGLALG   94 (246)
T ss_pred             hhCcccEEEecCCCCcC
Confidence               18999999965544

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.6e-14  Score=115.19  Aligned_cols=86  Identities=24%  Similarity=0.339  Sum_probs=71.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +++++||+++||||++|||++++++|+++|++|++++|+.++.++..+++....+..++.++++|++|.+ .+.+.+   
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999998888888876544446889999999976 222221   


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++||||-
T Consensus        89 ~~~~~iD~li~nAG  102 (313)
T PRK05854         89 AEGRPIHLLINNAG  102 (313)
T ss_pred             HhCCCccEEEECCc
Confidence                1789999884

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.53  E-value=4.9e-14  Score=113.15  Aligned_cols=87  Identities=22%  Similarity=0.230  Sum_probs=73.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhcc
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYKY  151 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~~  151 (167)
                      +..+.+|++++||||++|+|+++|.+|++.|++++++|.+.+..++.++++++. |  +++.+.||+++.++  ..+.+.
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g--~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G--EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C--ceeEEEecCCCHHHHHHHHHHH
Confidence            344789999999999999999999999999999999999999999999999876 4  69999999999762  222221


Q ss_pred             ------ceEEEEeccCcc
Q 031009          152 ------SWLLVNIYVPSC  163 (167)
Q Consensus       152 ------~dilvN~ai~~~  163 (167)
                            ++++||||---+
T Consensus       109 k~e~G~V~ILVNNAGI~~  126 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVT  126 (300)
T ss_pred             HHhcCCceEEEecccccc
Confidence                  899999985433

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.50  E-value=2.1e-13  Score=109.59  Aligned_cols=90  Identities=28%  Similarity=0.223  Sum_probs=72.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-CceEEEEeccCCChhh-h-----h
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWVPPSRLVSAPY-N-----I  147 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~~-~-----~  147 (167)
                      +.++.||+++|||+++|||+++|++|+++|++|++++|+++.+++...++..... ..++..+.+|++++++ +     .
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            4579999999999999999999999999999999999999999888888765432 2368999999997652 1     1


Q ss_pred             hhc---cceEEEEeccCccc
Q 031009          148 IYK---YSWLLVNIYVPSCF  164 (167)
Q Consensus       148 ~~~---~~dilvN~ai~~~~  164 (167)
                      ..+   .+|++||||-....
T Consensus        83 ~~~~~GkidiLvnnag~~~~  102 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGL  102 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCC
Confidence            122   28999999865543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=1.7e-13  Score=112.22  Aligned_cols=86  Identities=26%  Similarity=0.302  Sum_probs=73.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ...++++++++|||+++|||+++|++|+.+|++|++.+|+.+..++.++++....+..++.+.++|+++.. ...+..  
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            34478899999999999999999999999999999999999999999999988666668999999999986 222221  


Q ss_pred             -----cceEEEEec
Q 031009          151 -----YSWLLVNIY  159 (167)
Q Consensus       151 -----~~dilvN~a  159 (167)
                           ..|++||||
T Consensus       109 ~~~~~~ldvLInNA  122 (314)
T KOG1208|consen  109 KKKEGPLDVLINNA  122 (314)
T ss_pred             HhcCCCccEEEeCc
Confidence                 178888877

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.48  E-value=3.8e-13  Score=107.01  Aligned_cols=83  Identities=24%  Similarity=0.260  Sum_probs=67.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      +++||+++|||+++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ ...+.+     
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNV-DVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEecCCCHHHHHHHHHHHHhh
Confidence            578999999999999999999999999999999999998888887777654333 6888999999986 222211     


Q ss_pred             -cceEEEEecc
Q 031009          151 -YSWLLVNIYV  160 (167)
Q Consensus       151 -~~dilvN~ai  160 (167)
                       ..|++|||+-
T Consensus        84 g~iD~lv~nag   94 (263)
T PRK08339         84 GEPDIFFFSTG   94 (263)
T ss_pred             CCCcEEEECCC
Confidence             2788888874

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.46  E-value=9e-13  Score=104.30  Aligned_cols=86  Identities=29%  Similarity=0.354  Sum_probs=69.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+..++.++.+|++|.+. .. +.+   
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888887777665443468889999999862 21 111   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence               26899998853

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1e-12  Score=106.50  Aligned_cols=87  Identities=20%  Similarity=0.216  Sum_probs=69.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~-  150 (167)
                      +++++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++....+..++.++.+|++|.+ ...+ .+ 
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888777777765433336888999999986 2222 11 


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        90 ~~~~~~iD~li~nAg  104 (306)
T PRK06197         90 RAAYPRIDLLINNAG  104 (306)
T ss_pred             HhhCCCCCEEEECCc
Confidence                 2788898884

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.3e-12  Score=103.17  Aligned_cols=86  Identities=23%  Similarity=0.285  Sum_probs=69.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+++.+++..+++.......++.++++|++|++ ...+.+    
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999888888887765322236889999999976 222221    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++|||+-.
T Consensus        83 ~~g~id~li~~ag~   96 (260)
T PRK07063         83 AFGPLDVLVNNAGI   96 (260)
T ss_pred             HhCCCcEEEECCCc
Confidence               27899998853

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.1e-12  Score=103.17  Aligned_cols=85  Identities=20%  Similarity=0.183  Sum_probs=68.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      .+.+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+   
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GG-KVVPVCCDVSQHQQVTSMLDQVT   81 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CC-eEEEEEccCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888887777654 33 6888999999976 222211   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|++|||+-.
T Consensus        82 ~~~g~id~lv~~ag~   96 (253)
T PRK05867         82 AELGGIDIAVCNAGI   96 (253)
T ss_pred             HHhCCCCEEEECCCC
Confidence                27899988754

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.44  E-value=9.6e-13  Score=103.53  Aligned_cols=83  Identities=24%  Similarity=0.264  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+++++++..+++... +. ++.++.+|+++.+ ... +.+   
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-GG-EAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999998888887777654 33 5888999999976 222 221   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|++||||-
T Consensus        80 ~~~~id~li~~ag   92 (254)
T PRK07478         80 RFGGLDIAFNNAG   92 (254)
T ss_pred             hcCCCCEEEECCC
Confidence               2688888884

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.44  E-value=8.5e-13  Score=107.55  Aligned_cols=83  Identities=22%  Similarity=0.246  Sum_probs=64.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh----------hHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------ERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+.          +.+++..+++... +. ++.++++|++|.+
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GG-RGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CC-ceEEEEcCCCCHH
Confidence            4568899999999999999999999999999999999973          3455555566443 33 5778999999986


Q ss_pred             -hhh-hhc------cceEEEEec
Q 031009          145 -YNI-IYK------YSWLLVNIY  159 (167)
Q Consensus       145 -~~~-~~~------~~dilvN~a  159 (167)
                       .+. +.+      .+|++|||+
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA  103 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDI  103 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECC
Confidence             221 111      279999997

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.44  E-value=9e-13  Score=105.60  Aligned_cols=84  Identities=23%  Similarity=0.227  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ... +..   
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GF-DVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998888877777643 33 6888999999976 222 221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        80 ~~g~id~li~nAg~   93 (275)
T PRK05876         80 LLGHVDVVFSNAGI   93 (275)
T ss_pred             HcCCCCEEEECCCc
Confidence               26899998853

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.42  E-value=1.3e-12  Score=103.42  Aligned_cols=85  Identities=20%  Similarity=0.364  Sum_probs=65.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-  150 (167)
                      +..+++|+++||||++|||++++++|+++|++|++++| +++.+++..++++...+. ++.++++|++|.+ .+. +.. 
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGI-KAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999998865 566666666676554443 6889999999976 221 111 


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           ..|++||||.
T Consensus        82 ~~~~g~id~lv~nAg   96 (260)
T PRK08416         82 DEDFDRVDFFISNAI   96 (260)
T ss_pred             HHhcCCccEEEECcc
Confidence                 2688999884

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.6e-12  Score=107.07  Aligned_cols=85  Identities=26%  Similarity=0.326  Sum_probs=69.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh----
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY----  149 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~----  149 (167)
                      ++.+++|+++|||+++|||++++++|+++|++|++++|+++.+++..++++.. +. ++.++.+|++|.+. +.+.    
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~-~~~~~~~Dv~d~~~v~~~~~~~~   79 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GA-EVLVVPTDVTDADQVKALATQAA   79 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEeeCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999988888887654 33 68889999999762 2221    


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ..+|++||||-.
T Consensus        80 ~~~g~iD~lVnnAG~   94 (330)
T PRK06139         80 SFGGRIDVWVNNVGV   94 (330)
T ss_pred             HhcCCCCEEEECCCc
Confidence               127899999853

>PRK08589 short chain dehydrogenase; Validated

Probab=99.42  E-value=1.5e-12  Score=103.86  Aligned_cols=81  Identities=21%  Similarity=0.199  Sum_probs=65.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+ +.+++..+++... +. ++.++.+|+++.+. .. +..    
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GG-KAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CC-eEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999 7777777777543 33 58889999999762 22 111    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++|||+-
T Consensus        80 ~g~id~li~~Ag   91 (272)
T PRK08589         80 FGRVDVLFNNAG   91 (272)
T ss_pred             cCCcCEEEECCC
Confidence              1689999884

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.41  E-value=2.7e-12  Score=103.84  Aligned_cols=85  Identities=22%  Similarity=0.343  Sum_probs=68.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +...+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.+  
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-~~-~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-GG-DAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHH
Confidence            345788999999999999999999999999999999999998888877777544 33 5788999999976 222222  


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++|||+-
T Consensus       112 ~~~~g~id~li~~AG  126 (293)
T PRK05866        112 EKRIGGVDILINNAG  126 (293)
T ss_pred             HHHcCCCCEEEECCC
Confidence                 3789998874

>PRK09186 flagellin modification protein A; Provisional

Probab=99.40  E-value=2.1e-12  Score=101.32  Aligned_cols=84  Identities=29%  Similarity=0.279  Sum_probs=67.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhcc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYKY---  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~~---  151 (167)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++....+...+.++.+|++|.+. .. +...   
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888877777554333356777999999762 22 2221   


Q ss_pred             ---ceEEEEecc
Q 031009          152 ---SWLLVNIYV  160 (167)
Q Consensus       152 ---~dilvN~ai  160 (167)
                         .|++||||.
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence               699999984

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.40  E-value=1.5e-12  Score=102.84  Aligned_cols=80  Identities=16%  Similarity=0.202  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc-
Q 031009           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK-  150 (167)
Q Consensus        76 ~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~-  150 (167)
                      .+++||+++||||+  +|||++++++|+++|++|++.+|+. +.++..+++.   +. ++.++++|++|.+ .+.+ .. 
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~-~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DE-EDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cC-ceeEEeCCCCCHHHHHHHHHHH
Confidence            45789999999999  8999999999999999999999973 4444334432   22 5788999999976 2221 11 


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        78 ~~~~g~iD~lv~nAg   92 (252)
T PRK06079         78 KERVGKIDGIVHAIA   92 (252)
T ss_pred             HHHhCCCCEEEEccc
Confidence                 1789999884

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2.2e-12  Score=100.84  Aligned_cols=81  Identities=16%  Similarity=0.237  Sum_probs=66.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY-----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~-----  149 (167)
                      +++||+++|||+++|||++++++|+++|++|++.+|+.+++++..+++... +. ++..+.+|++|.+. +. +.     
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TD-NVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CC-CeEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988887777654 33 57788999998762 21 11     


Q ss_pred             -c-cceEEEEec
Q 031009          150 -K-YSWLLVNIY  159 (167)
Q Consensus       150 -~-~~dilvN~a  159 (167)
                       . .+|++|||+
T Consensus        80 ~g~~iD~li~na   91 (227)
T PRK08862         80 FNRAPDVLVNNW   91 (227)
T ss_pred             hCCCCCEEEECC
Confidence             2 478999998

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.40  E-value=2.8e-12  Score=101.63  Aligned_cols=85  Identities=15%  Similarity=0.130  Sum_probs=62.0

Q ss_pred             CCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh
Q 031009           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~  149 (167)
                      +.++++||+++||||+  +|||++++++|+++|++|++.+|+.+.. +.++++.++.+  ...++++|++|.+. +. +.
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~   80 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELD--APIFLPLDVREPGQLEAVFA   80 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhc--cceEEecCcCCHHHHHHHHH
Confidence            4556899999999998  5999999999999999999999986432 23344443333  25678999999862 21 11


Q ss_pred             c------cceEEEEeccC
Q 031009          150 K------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~------~~dilvN~ai~  161 (167)
                      .      .+|++||||-.
T Consensus        81 ~~~~~~g~ld~lv~nAg~   98 (258)
T PRK07533         81 RIAEEWGRLDFLLHSIAF   98 (258)
T ss_pred             HHHHHcCCCCEEEEcCcc
Confidence            1      27899998853

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.39  E-value=2.1e-12  Score=102.96  Aligned_cols=82  Identities=16%  Similarity=0.310  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      .+++||+++||||++  |||++++++|+++|++|++.+|+ ++.++..+++....+  ...++.+|++|.+ .+.+.+  
T Consensus         2 ~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~   78 (262)
T PRK07984          2 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG--SDIVLPCDVAEDASIDAMFAEL   78 (262)
T ss_pred             cccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC--CceEeecCCCCHHHHHHHHHHH
Confidence            347899999999986  99999999999999999999987 344455566655433  3567899999976 222111  


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        79 ~~~~g~iD~linnAg   93 (262)
T PRK07984         79 GKVWPKFDGFVHSIG   93 (262)
T ss_pred             HhhcCCCCEEEECCc
Confidence                 1789999984

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.39  E-value=2.3e-12  Score=105.16  Aligned_cols=83  Identities=23%  Similarity=0.176  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~---  150 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.++.++..+++... + .++.++.+|++|.+ ...+. .   
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-P-DSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-C-CceEEEEecCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999998888777776432 2 25888999999976 22222 1   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|++||||-
T Consensus        80 ~~~~iD~li~nAg   92 (322)
T PRK07453         80 LGKPLDALVCNAA   92 (322)
T ss_pred             hCCCccEEEECCc
Confidence               2789999874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.39  E-value=8.9e-13  Score=100.97  Aligned_cols=77  Identities=32%  Similarity=0.478  Sum_probs=63.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh-h-hh----c
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN-I-IY----K  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~-~-~~----~  150 (167)
                      .+.|.+++||||++|||+++|++|.+.|-+|++++|+++.+++...+..      .+....||+.|.+.. . +.    .
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p------~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP------EIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc------chheeeecccchhhHHHHHHHHHhh
Confidence            4678899999999999999999999999999999999999887766542      477789999998722 1 11    1


Q ss_pred             c--ceEEEEec
Q 031009          151 Y--SWLLVNIY  159 (167)
Q Consensus       151 ~--~dilvN~a  159 (167)
                      +  .+++||||
T Consensus        76 ~P~lNvliNNA   86 (245)
T COG3967          76 YPNLNVLINNA   86 (245)
T ss_pred             CCchheeeecc
Confidence            1  89999988

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.39  E-value=2.8e-12  Score=103.34  Aligned_cols=82  Identities=21%  Similarity=0.187  Sum_probs=64.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh---------hHHHHHHHHHHHHhCCceEEEEeccCCChhh-h
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N  146 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~  146 (167)
                      .+++|+++||||++|||++++++|+++|++|++++++.         +.+++..+++... +. ++.++.+|++|.+. .
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GG-EAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CC-ceEEEeCCCCCHHHHH
Confidence            57899999999999999999999999999999998876         6667777777543 33 57889999999762 2


Q ss_pred             h-hh------ccceEEEEecc
Q 031009          147 I-IY------KYSWLLVNIYV  160 (167)
Q Consensus       147 ~-~~------~~~dilvN~ai  160 (167)
                      . +.      ..+|++||||-
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG  101 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAG  101 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCC
Confidence            1 11      12788999874

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.38  E-value=4.3e-12  Score=104.58  Aligned_cols=85  Identities=21%  Similarity=0.284  Sum_probs=69.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~----  150 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++... +. ++.++++|++|.+. +.+.+    
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~-~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GG-EALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999999999888888877654 33 68889999999872 22211    


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         .+|++|||+-..
T Consensus        82 ~~g~iD~lInnAg~~   96 (334)
T PRK07109         82 ELGPIDTWVNNAMVT   96 (334)
T ss_pred             HCCCCCEEEECCCcC
Confidence               278999988543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.38  E-value=3.3e-12  Score=103.05  Aligned_cols=82  Identities=27%  Similarity=0.366  Sum_probs=70.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhcc-----c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYKY-----S  152 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~~-----~  152 (167)
                      |++++||||+.|||++.+++|+++|.+|++++|++++++.+.+|+.+..+ .++.++..|.++.++  +...+.     +
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            48999999999999999999999999999999999999999999999877 489999999998763  222222     6


Q ss_pred             eEEEEeccCc
Q 031009          153 WLLVNIYVPS  162 (167)
Q Consensus       153 dilvN~ai~~  162 (167)
                      -+||||+-..
T Consensus       128 gILVNNvG~~  137 (312)
T KOG1014|consen  128 GILVNNVGMS  137 (312)
T ss_pred             EEEEeccccc
Confidence            7899998544

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.38  E-value=2.8e-12  Score=105.22  Aligned_cols=82  Identities=18%  Similarity=0.284  Sum_probs=65.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh--h-hhhhhc-----
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA--P-YNIIYK-----  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~--~-~~~~~~-----  150 (167)
                      .||+++||||++|||++++++|+++|++|++++|+++++++..++++...+..++..+.+|+++.  + .+...+     
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            48899999999999999999999999999999999999998888887654434688889999852  2 111111     


Q ss_pred             cceEEEEecc
Q 031009          151 YSWLLVNIYV  160 (167)
Q Consensus       151 ~~dilvN~ai  160 (167)
                      ..|++||||-
T Consensus       132 didilVnnAG  141 (320)
T PLN02780        132 DVGVLINNVG  141 (320)
T ss_pred             CccEEEEecC
Confidence            1458888884

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.38  E-value=3.4e-12  Score=102.16  Aligned_cols=82  Identities=17%  Similarity=0.233  Sum_probs=60.7

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc-
Q 031009           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK-  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~-  150 (167)
                      .++++|+++|||+++  |||++++++|+++|++|++.+|+++..++ .+++....+.  ..++++|++|.+. +. +.+ 
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~--~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS--DFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC--ceEEeCCCCCHHHHHHHHHHH
Confidence            458899999999997  99999999999999999999987643333 3444333343  3568999999862 22 111 


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        80 ~~~~g~iD~lVnnAG   94 (271)
T PRK06505         80 EKKWGKLDFVVHAIG   94 (271)
T ss_pred             HHHhCCCCEEEECCc
Confidence                 2789999884

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.38  E-value=4.1e-12  Score=100.69  Aligned_cols=80  Identities=24%  Similarity=0.279  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~---  150 (167)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ . +.+..   
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GE-RARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-eeEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987766655544    33 6888999999986 2 22221   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|++|||+-
T Consensus        77 ~~g~id~lv~~ag   89 (261)
T PRK08265         77 RFGRVDILVNLAC   89 (261)
T ss_pred             HhCCCCEEEECCC
Confidence               2689999874

>PRK06194 hypothetical protein; Provisional

Probab=99.37  E-value=4e-12  Score=101.70  Aligned_cols=84  Identities=23%  Similarity=0.254  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~---  150 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+ ..   
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~d~~~~~~~~~~~~~   79 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GA-EVLGVRTDVSDAAQVEALADAALE   79 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988877777776543 33 6888999999976 2222 21   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|+++|+|-.
T Consensus        80 ~~g~id~vi~~Ag~   93 (287)
T PRK06194         80 RFGAVHLLFNNAGV   93 (287)
T ss_pred             HcCCCCEEEECCCC
Confidence               26889988854

>PLN02253 xanthoxin dehydrogenase

Probab=99.37  E-value=6.1e-12  Score=100.40  Aligned_cols=84  Identities=20%  Similarity=0.160  Sum_probs=65.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~--  150 (167)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..  + .++.++++|++|.+. ..+.+  
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~Dl~d~~~~~~~~~~~   88 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--E-PNVCFFHCDVTVEDDVSRAVDFT   88 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--C-CceEEEEeecCCHHHHHHHHHHH
Confidence            34468899999999999999999999999999999999988777666555521  2 268899999999862 22221  


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           ..|++||||-
T Consensus        89 ~~~~g~id~li~~Ag  103 (280)
T PLN02253         89 VDKFGTLDIMVNNAG  103 (280)
T ss_pred             HHHhCCCCEEEECCC
Confidence                 2789999884

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.37  E-value=4.2e-12  Score=100.87  Aligned_cols=82  Identities=21%  Similarity=0.225  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc-
Q 031009           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK-  150 (167)
Q Consensus        76 ~~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~-  150 (167)
                      ..+++|+++||||  ++|||++++++|+++|++|++.+|.. +.++..+++....+.  ...+++|++|.+. + .+.. 
T Consensus         2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~   78 (261)
T PRK08690          2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS--ELVFRCDVASDDEINQVFADL   78 (261)
T ss_pred             CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC--ceEEECCCCCHHHHHHHHHHH
Confidence            3578999999997  67999999999999999999988763 344445556544333  4578999999862 2 2211 


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        79 ~~~~g~iD~lVnnAG   93 (261)
T PRK08690         79 GKHWDGLDGLVHSIG   93 (261)
T ss_pred             HHHhCCCcEEEECCc
Confidence                 2789999984

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.36  E-value=7e-12  Score=98.66  Aligned_cols=86  Identities=29%  Similarity=0.327  Sum_probs=68.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      +.++++|+++||||++|||++++++|+++|++|++.+|++++.++..+++... +. ++.++++|++|.+ .+. +..  
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GL-SAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-Cc-eEEEEEccCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998887777777543 33 6888999999976 222 221  


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          ..|++||++...
T Consensus        83 ~~~~~~d~li~~ag~~   98 (255)
T PRK07523         83 AEIGPIDILVNNAGMQ   98 (255)
T ss_pred             HhcCCCCEEEECCCCC
Confidence                168888888543

>PRK09242 tropinone reductase; Provisional

Probab=99.36  E-value=7.1e-12  Score=98.74  Aligned_cols=87  Identities=34%  Similarity=0.416  Sum_probs=69.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhh---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIY---  149 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~---  149 (167)
                      ++.+++|+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++....+..++.++.+|+++.+.  ..+.   
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            44688999999999999999999999999999999999998888877777655333478899999999762  1111   


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ..+|++||++-.
T Consensus        84 ~~~g~id~li~~ag~   98 (257)
T PRK09242         84 DHWDGLHILVNNAGG   98 (257)
T ss_pred             HHcCCCCEEEECCCC
Confidence               126888988854

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.36  E-value=2e-12  Score=100.39  Aligned_cols=84  Identities=25%  Similarity=0.231  Sum_probs=68.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhcc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYKY--  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~~--  151 (167)
                      ++++||.+++||+.+|||++++++|+++|.++.+++.+.|..+ ...+|++..+...+.|+++||++..  .+.+.+.  
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            4688999999999999999999999999988887777766644 4577777777778999999999965  2222222  


Q ss_pred             ----ceEEEEecc
Q 031009          152 ----SWLLVNIYV  160 (167)
Q Consensus       152 ----~dilvN~ai  160 (167)
                          +|++||+|-
T Consensus        80 ~fg~iDIlINgAG   92 (261)
T KOG4169|consen   80 TFGTIDILINGAG   92 (261)
T ss_pred             HhCceEEEEcccc
Confidence                899999883

>PRK06720 hypothetical protein; Provisional

Probab=99.36  E-value=7.6e-12  Score=94.03  Aligned_cols=83  Identities=19%  Similarity=0.143  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY----  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~----  149 (167)
                      +.+++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++... +. +..++.+|+++.+. .. +.    
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GG-EALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777777643 33 56788999998762 22 11    


Q ss_pred             c--cceEEEEecc
Q 031009          150 K--YSWLLVNIYV  160 (167)
Q Consensus       150 ~--~~dilvN~ai  160 (167)
                      .  .+|++||||-
T Consensus        90 ~~G~iDilVnnAG  102 (169)
T PRK06720         90 AFSRIDMLFQNAG  102 (169)
T ss_pred             HcCCCCEEEECCC
Confidence            1  2788999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.35  E-value=8.1e-12  Score=101.02  Aligned_cols=84  Identities=15%  Similarity=0.151  Sum_probs=66.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY---  149 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~---  149 (167)
                      +..++||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++..   ..++..+++|++|.+. .. +.   
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAV   80 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4468899999999999999999999999999999999999888777666532   2257778899999762 11 11   


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ..+|++|||+-.
T Consensus        81 ~~~g~id~vI~nAG~   95 (296)
T PRK05872         81 ERFGGIDVVVANAGI   95 (296)
T ss_pred             HHcCCCCEEEECCCc
Confidence               127889988854

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.35  E-value=8e-12  Score=98.06  Aligned_cols=83  Identities=23%  Similarity=0.268  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++.+. +. ++.++++|+++.+. .. ...   
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-GG-KAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988888777777543 33 57889999998762 22 211   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||++-
T Consensus        82 ~~~~id~li~~ag   94 (252)
T PRK07035         82 RHGRLDILVNNAA   94 (252)
T ss_pred             HcCCCCEEEECCC
Confidence               2789998884

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.34  E-value=7.6e-12  Score=99.35  Aligned_cols=81  Identities=22%  Similarity=0.239  Sum_probs=60.6

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--
Q 031009           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        77 ~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      .++||+++||||++  |||++++++|+++|++|++.+|+. ..++..+++....+.  ..++++|++|.+ .+. +..  
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~--~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC--NFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC--ceEEEccCCCHHHHHHHHHHHH
Confidence            46899999999997  999999999999999999999874 344455666554343  246789999986 222 211  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++|||+-
T Consensus        82 ~~~g~iDilVnnag   95 (260)
T PRK06603         82 EKWGSFDFLLHGMA   95 (260)
T ss_pred             HHcCCccEEEEccc
Confidence                1789999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.4e-11  Score=97.21  Aligned_cols=83  Identities=31%  Similarity=0.355  Sum_probs=67.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc--cc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK--YS  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~--~~  152 (167)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|.+. . .+..  ..
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~g~i   82 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGV-DVAVHALDLSSPEAREQLAAEAGDI   82 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEecCCCHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999999998888777777655443 68889999999762 2 2222  27


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |++|||+-
T Consensus        83 d~lv~~ag   90 (259)
T PRK06125         83 DILVNNAG   90 (259)
T ss_pred             CEEEECCC
Confidence            88888874

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.34  E-value=1.1e-11  Score=97.50  Aligned_cols=84  Identities=33%  Similarity=0.400  Sum_probs=67.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +.+.+|+++||||++|||++++++|+++|++|++.+|+.+.+++..+++... +. ++.++.+|++|.+ ... +..   
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GI-KAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CC-eEEEEecCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988888877777654 22 5788899999976 222 211   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||++-.
T Consensus        83 ~~~~id~vi~~ag~   96 (254)
T PRK08085         83 DIGPIDVLINNAGI   96 (254)
T ss_pred             hcCCCCEEEECCCc
Confidence               26899998853

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.34  E-value=6.6e-12  Score=99.60  Aligned_cols=85  Identities=13%  Similarity=0.191  Sum_probs=59.9

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc
Q 031009           75 EPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~  150 (167)
                      ++.+++|+++||||+  +|||++++++|+++|++|++.+|+.... +..+++.++....++.++++|++|.+ .+. +.+
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            346789999999997  8999999999999999999998753211 12233333221225788999999986 222 211


Q ss_pred             ------cceEEEEecc
Q 031009          151 ------YSWLLVNIYV  160 (167)
Q Consensus       151 ------~~dilvN~ai  160 (167)
                            .+|++|||+-
T Consensus        81 ~~~~~g~ld~lv~nag   96 (257)
T PRK08594         81 IKEEVGVIHGVAHCIA   96 (257)
T ss_pred             HHHhCCCccEEEECcc
Confidence                  1789999874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.34  E-value=7.8e-12  Score=98.91  Aligned_cols=81  Identities=32%  Similarity=0.342  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~---  150 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++    +. ++.++++|++|.+ .. .+..   
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GD-HVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-cceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987766554433    33 5788999999976 22 2211   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++|||+-.
T Consensus        77 ~~g~id~li~~ag~   90 (263)
T PRK06200         77 AFGKLDCFVGNAGI   90 (263)
T ss_pred             hcCCCCEEEECCCC
Confidence               27899998853

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.34  E-value=8.6e-12  Score=100.07  Aligned_cols=81  Identities=17%  Similarity=0.273  Sum_probs=59.9

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc--
Q 031009           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK--  150 (167)
Q Consensus        77 ~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~--  150 (167)
                      -+++|+++||||+  +|||++++++|+++|++|++.+|+.+ .++.++++..+.+. . .++++|++|.+. ..+ ..  
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHH
Confidence            3679999999997  89999999999999999999999853 33334445444343 3 578999999862 221 11  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++||||-
T Consensus        79 ~~~g~iDilVnnAG   92 (274)
T PRK08415         79 KDLGKIDFIVHSVA   92 (274)
T ss_pred             HHcCCCCEEEECCc
Confidence                1789999985

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=1e-11  Score=100.99  Aligned_cols=85  Identities=15%  Similarity=0.178  Sum_probs=65.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hh-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IY-  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~-  149 (167)
                      +..++++|+++|||+++|||++++++|+++|++|++.++.. +..++..+++... +. ++.++.+|++|.+ ... +. 
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g~-~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-GA-KAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-CC-eEEEEeCCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999998753 4566666777553 33 6889999999976 222 11 


Q ss_pred             ----ccceEEEEecc
Q 031009          150 ----KYSWLLVNIYV  160 (167)
Q Consensus       150 ----~~~dilvN~ai  160 (167)
                          ..+|++||||-
T Consensus        84 ~~~~g~iD~li~nAG   98 (306)
T PRK07792         84 AVGLGGLDIVVNNAG   98 (306)
T ss_pred             HHHhCCCCEEEECCC
Confidence                12788888874

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1.7e-11  Score=96.60  Aligned_cols=85  Identities=18%  Similarity=0.191  Sum_probs=65.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-  150 (167)
                      ++++++|+++|||+++|||++++++|+++|++|++++|+.+ .+++..+++... +. ++.++++|++|++ ... ... 
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GR-RAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHH
Confidence            44689999999999999999999999999999999999764 456666666543 33 5788999999976 222 111 


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++|||+-.
T Consensus        81 ~~~~g~id~li~~ag~   96 (254)
T PRK06114         81 EAELGALTLAVNAAGI   96 (254)
T ss_pred             HHHcCCCCEEEECCCC
Confidence                 16889998853

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1.3e-11  Score=96.96  Aligned_cols=83  Identities=24%  Similarity=0.355  Sum_probs=66.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++..++..+++... +. ++.++.+|++|.+. +. +..    
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GR-RALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-CC-ceEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777776543 33 58899999999762 21 111    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||++..
T Consensus        80 ~g~~d~vi~~ag~   92 (258)
T PRK07890         80 FGRVDALVNNAFR   92 (258)
T ss_pred             cCCccEEEECCcc
Confidence              26899998853

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1.2e-11  Score=97.11  Aligned_cols=84  Identities=21%  Similarity=0.245  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~---  150 (167)
                      +.+++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++... +. ++.++++|+++.+ ...+ ..   
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-GG-EALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998887777777543 33 5889999999976 2222 11   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||++..
T Consensus        81 ~~g~id~li~~ag~   94 (253)
T PRK06172         81 AYGRLDYAFNNAGI   94 (253)
T ss_pred             HhCCCCEEEECCCC
Confidence               26889988753

>PRK06128 oxidoreductase; Provisional

Probab=99.33  E-value=3.4e-11  Score=97.47  Aligned_cols=86  Identities=27%  Similarity=0.335  Sum_probs=64.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh--HHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhh
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIY  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~  149 (167)
                      .+..+++|+++||||++|||++++++|+++|++|++.+++.+  ..++..++++.. +. ++.++.+|++|.+.  ..+.
T Consensus        49 ~~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~  126 (300)
T PRK06128         49 GFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GR-KAVALPGDLKDEAFCRQLVE  126 (300)
T ss_pred             cccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CC-eEEEEecCCCCHHHHHHHHH
Confidence            345688999999999999999999999999999999887543  344455555443 33 68889999999762  2222


Q ss_pred             c------cceEEEEeccC
Q 031009          150 K------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~------~~dilvN~ai~  161 (167)
                      +      .+|++||||-.
T Consensus       127 ~~~~~~g~iD~lV~nAg~  144 (300)
T PRK06128        127 RAVKELGGLDILVNIAGK  144 (300)
T ss_pred             HHHHHhCCCCEEEECCcc
Confidence            1      27899998853

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.33  E-value=9.6e-12  Score=98.66  Aligned_cols=83  Identities=20%  Similarity=0.259  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChh--HHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhh
Q 031009           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIY  149 (167)
Q Consensus        76 ~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~  149 (167)
                      ++++||+++|||++  +|||++++++|+++|++|++.+++.+  ..++..+++.+...  .+.++++|++|.+. . .+.
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN--PSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC--cceEeecCcCCHHHHHHHHH
Confidence            35789999999986  89999999999999999998876543  34445556654422  46788999999872 2 111


Q ss_pred             c------cceEEEEecc
Q 031009          150 K------YSWLLVNIYV  160 (167)
Q Consensus       150 ~------~~dilvN~ai  160 (167)
                      .      .+|++|||+-
T Consensus        80 ~~~~~~g~iD~lv~nag   96 (258)
T PRK07370         80 TIKQKWGKLDILVHCLA   96 (258)
T ss_pred             HHHHHcCCCCEEEEccc
Confidence            1      2789998884

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.32  E-value=1.6e-11  Score=96.92  Aligned_cols=81  Identities=17%  Similarity=0.202  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+..  ++..++++.. +. ++.++++|++|.+ ... +.+   
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-GR-KFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-CC-eEEEEEeCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999988643  2333444332 33 6889999999987 222 221   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|++||||-
T Consensus        80 ~~g~iD~lv~~ag   92 (251)
T PRK12481         80 VMGHIDILINNAG   92 (251)
T ss_pred             HcCCCCEEEECCC
Confidence               2789999884

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.32  E-value=2.2e-11  Score=95.80  Aligned_cols=86  Identities=24%  Similarity=0.341  Sum_probs=68.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~-  150 (167)
                      ++..+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..++++.. +. ++.++.+|+++.+. . .+.. 
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~   82 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GG-AAEALAFDIADEEAVAAAFARI   82 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHH
Confidence            455789999999999999999999999999999999999988888777777553 33 58899999999762 2 2211 


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           ..|++||++-.
T Consensus        83 ~~~~~~id~vi~~ag~   98 (256)
T PRK06124         83 DAEHGRLDILVNNVGA   98 (256)
T ss_pred             HHhcCCCCEEEECCCC
Confidence                 15788888753

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.5e-11  Score=96.16  Aligned_cols=84  Identities=18%  Similarity=0.227  Sum_probs=65.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~---  150 (167)
                      |+++++|+++|||+++|||++++++|+++|++|++++|+++..++..+++... +. .+.++.+|++|.+. ..+.+   
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~   78 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-GG-TAIAVQVDVSDPDSAKAMADATV   78 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999987777666666543 22 47788999999762 22111   


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          ..|++||++.
T Consensus        79 ~~~~~id~vi~~ag   92 (250)
T PRK07774         79 SAFGGIDYLVNNAA   92 (250)
T ss_pred             HHhCCCCEEEECCC
Confidence                2688888875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.32  E-value=1.9e-11  Score=96.12  Aligned_cols=84  Identities=20%  Similarity=0.217  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~---  150 (167)
                      ..+++|+++|||+++|||+++++.|+++|++|++++|+++..++..+++... +. ++.++++|++|.+.  ..+..   
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~   80 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-GG-KAIGVAMDVTNEDAVNAGIDKVAE   80 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-Cc-eEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888887777553 33 68889999999762  22221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||++-.
T Consensus        81 ~~~~~d~vi~~ag~   94 (262)
T PRK13394         81 RFGSVDILVSNAGI   94 (262)
T ss_pred             HcCCCCEEEECCcc
Confidence               16889998854

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.32  E-value=1.1e-11  Score=98.00  Aligned_cols=79  Identities=22%  Similarity=0.223  Sum_probs=61.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+    ..+. ++.++++|++|.+ ... +..    
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AHGD-AVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCC-ceEEEEeccCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998876655432    2233 5888999999875 222 211    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        ..|++||||-
T Consensus        77 ~g~id~li~~Ag   88 (262)
T TIGR03325        77 FGKIDCLIPNAG   88 (262)
T ss_pred             hCCCCEEEECCC
Confidence              2689999874

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05717 oxidoreductase; Validated

Probab=99.32  E-value=1.4e-11  Score=97.10  Aligned_cols=82  Identities=22%  Similarity=0.302  Sum_probs=63.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh-h-hhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN-I-IYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~-~-~~~-  150 (167)
                      +.++++||+++|||+++|||++++++|+++|++|++++|+.++.++..+++    +. ++.++++|+++.+.. . +.+ 
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GE-NAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CC-ceEEEEccCCCHHHHHHHHHHH
Confidence            455789999999999999999999999999999999999877665543332    32 578899999997621 1 111 


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           ..|++||++.
T Consensus        79 ~~~~g~id~li~~ag   93 (255)
T PRK05717         79 LGQFGRLDALVCNAA   93 (255)
T ss_pred             HHHhCCCCEEEECCC
Confidence                 1689998884

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.31  E-value=1.7e-11  Score=97.41  Aligned_cols=84  Identities=29%  Similarity=0.335  Sum_probs=66.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      ++.+++|+++|||+++|||.+++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|+++.+ ... +..  
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~i~~~~~~~~   81 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-GP-EGLGVSADVRDYAAVEAAFAQIA   81 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CC-ceEEEECCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999988777766666544 32 5788999999876 222 222  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++||++-
T Consensus        82 ~~~~~iD~vi~~ag   95 (264)
T PRK07576         82 DEFGPIDVLVSGAA   95 (264)
T ss_pred             HHcCCCCEEEECCC
Confidence                2689999873

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.31  E-value=1.7e-11  Score=97.68  Aligned_cols=82  Identities=23%  Similarity=0.275  Sum_probs=66.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-h-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-Y-----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~-----  149 (167)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++... +. ++.++++|++|.+ ...+ .     
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GG-EALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988887777777543 33 6888999999976 2222 1     


Q ss_pred             -ccceEEEEecc
Q 031009          150 -KYSWLLVNIYV  160 (167)
Q Consensus       150 -~~~dilvN~ai  160 (167)
                       ...|++||++-
T Consensus        85 ~g~id~li~~ag   96 (278)
T PRK08277         85 FGPCDILINGAG   96 (278)
T ss_pred             cCCCCEEEECCC
Confidence             12789999875

>PRK05599 hypothetical protein; Provisional

Probab=99.30  E-value=1.4e-11  Score=96.99  Aligned_cols=78  Identities=21%  Similarity=0.225  Sum_probs=61.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~  152 (167)
                      |+++||||++|||++++++|+ +|++|++++|++++++++.+++++.++. .+.++++|++|.+. +. +..      .+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGAT-SVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCC-ceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 5999999999999998888888655332 57889999999762 21 111      26


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |++|||+-
T Consensus        79 d~lv~nag   86 (246)
T PRK05599         79 SLAVVAFG   86 (246)
T ss_pred             CEEEEecC
Confidence            88888773

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.30  E-value=5.3e-11  Score=94.07  Aligned_cols=85  Identities=27%  Similarity=0.276  Sum_probs=67.5

Q ss_pred             CCCCCEEEEeCCCC-chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hh----
Q 031009           77 MLPPYNVLITGSTK-GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IY----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~-GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~----  149 (167)
                      .+++|+++||||+| |||+++++.|+++|++|++.+|+.+++++..++++...+..++.++++|+++.+ ... +.    
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            56789999999985 999999999999999999999998888887777766444336888999999876 222 21    


Q ss_pred             --ccceEEEEeccC
Q 031009          150 --KYSWLLVNIYVP  161 (167)
Q Consensus       150 --~~~dilvN~ai~  161 (167)
                        ...|++|||+-.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence              126888998853

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.30  E-value=3e-11  Score=95.73  Aligned_cols=85  Identities=27%  Similarity=0.272  Sum_probs=68.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~--  150 (167)
                      .+++++|+++|||+++|||++++++|+++|++|++.+|+.+++++..+++... +. ++.++++|++|.+. .. +.+  
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-GI-EAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998888777777543 33 58899999999862 22 221  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||++-.
T Consensus        83 ~~~~~id~li~~ag~   97 (265)
T PRK07097         83 KEVGVIDILVNNAGI   97 (265)
T ss_pred             HhCCCCCEEEECCCC
Confidence                16888888753

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.30  E-value=1.2e-11  Score=97.90  Aligned_cols=81  Identities=15%  Similarity=0.113  Sum_probs=59.7

Q ss_pred             CCCCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCCh--hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-
Q 031009           75 EPMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-  148 (167)
Q Consensus        75 ~~~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-  148 (167)
                      +..+++|+++|||+  ++|||++++++|+++|++|++.+|+.  +..++..+++    +. ++.++++|++|.+ .+.+ 
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~i~~~~   76 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----PE-PAPVLELDVTNEEHLASLA   76 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----CC-CCcEEeCCCCCHHHHHHHH
Confidence            34578999999999  89999999999999999999998764  2333333322    32 5678999999986 2221 


Q ss_pred             h------ccceEEEEecc
Q 031009          149 Y------KYSWLLVNIYV  160 (167)
Q Consensus       149 ~------~~~dilvN~ai  160 (167)
                      .      ..+|++||||-
T Consensus        77 ~~~~~~~g~iD~li~nAG   94 (256)
T PRK07889         77 DRVREHVDGLDGVVHSIG   94 (256)
T ss_pred             HHHHHHcCCCcEEEEccc
Confidence            1      12788898884

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.30  E-value=2.5e-11  Score=94.93  Aligned_cols=81  Identities=20%  Similarity=0.322  Sum_probs=64.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~------~  151 (167)
                      +|+++||||++|||++++++|+++|++|++.+|+.+..++...++....+..++.++++|+++.+.  ..+.+      .
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999998888777777654433478999999999862  21211      2


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|++|||+-
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            678888774

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.30  E-value=2.3e-11  Score=95.83  Aligned_cols=81  Identities=22%  Similarity=0.263  Sum_probs=62.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|++. .++..+++... +. ++.++.+|++|.+ .. .+..    
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-GG-EALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-CC-eEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999853 44455555433 33 6888999999975 22 2221    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        ..|++||||-
T Consensus        82 ~~~id~lv~nAg   93 (260)
T PRK12823         82 FGRIDVLINNVG   93 (260)
T ss_pred             cCCCeEEEECCc
Confidence              2789999884

>PRK06196 oxidoreductase; Provisional

Probab=99.29  E-value=1.7e-11  Score=99.91  Aligned_cols=78  Identities=21%  Similarity=0.245  Sum_probs=62.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh------
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY------  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~------  149 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.      .+.++++|++|.+ .+.+.      
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            5788999999999999999999999999999999999887776655552      2678899999976 22221      


Q ss_pred             -ccceEEEEecc
Q 031009          150 -KYSWLLVNIYV  160 (167)
Q Consensus       150 -~~~dilvN~ai  160 (167)
                       ..+|++||||-
T Consensus        97 ~~~iD~li~nAg  108 (315)
T PRK06196         97 GRRIDILINNAG  108 (315)
T ss_pred             CCCCCEEEECCC
Confidence             12788998884

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.29  E-value=3.2e-11  Score=95.11  Aligned_cols=84  Identities=24%  Similarity=0.252  Sum_probs=64.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ...+++|+++||||++|||++++++|+++|++|++++|+ +..++..+++... +. ++.++++|+++.+ ...+.+   
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-GR-KVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999998 4555555555432 33 5888999999976 222221   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|++||++-.
T Consensus        87 ~~~g~id~li~~ag~  101 (258)
T PRK06935         87 EEFGKIDILVNNAGT  101 (258)
T ss_pred             HHcCCCCEEEECCCC
Confidence                26889988743

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.29  E-value=2.9e-11  Score=95.84  Aligned_cols=82  Identities=24%  Similarity=0.349  Sum_probs=66.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~----  150 (167)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|+++.+. .. +..    
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-GR-RAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887777776543 33 58889999999872 22 221    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        ..|++||+|-
T Consensus        85 ~~~id~vi~~Ag   96 (263)
T PRK07814         85 FGRLDIVVNNVG   96 (263)
T ss_pred             cCCCCEEEECCC
Confidence              3789999885

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.29  E-value=2.5e-11  Score=96.46  Aligned_cols=80  Identities=24%  Similarity=0.169  Sum_probs=62.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++.+|+++.+++..+++.      ++.++.+|++|.+. . .+..    
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999887766555442      36788999999762 1 1111    


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        ..|++|||+-..
T Consensus        76 ~~~id~li~~ag~~   89 (273)
T PRK07825         76 LGPIDVLVNNAGVM   89 (273)
T ss_pred             cCCCCEEEECCCcC
Confidence              268999987543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.29  E-value=2.3e-11  Score=97.33  Aligned_cols=81  Identities=16%  Similarity=0.220  Sum_probs=59.6

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--
Q 031009           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        77 ~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      .+++|+++||||+  +|||++++++|+++|++|++.+|++ ...+.++++.++.+.  ...+++|++|.+ .+. +..  
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGA--FVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCC--ceEEecCCCCHHHHHHHHHHHH
Confidence            5688999999997  8999999999999999999998863 233334445444333  456899999986 222 111  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++||||-
T Consensus        84 ~~~g~iD~lv~nAG   97 (272)
T PRK08159         84 KKWGKLDFVVHAIG   97 (272)
T ss_pred             HhcCCCcEEEECCc
Confidence                2799999984

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.28  E-value=2.8e-11  Score=95.31  Aligned_cols=82  Identities=23%  Similarity=0.159  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.. +..+++... +. ++.++.+|+++.+ ... +..   
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-QP-RAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999988766 556666544 33 5889999999976 222 221   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||++-
T Consensus        80 ~~~~id~vi~~ag   92 (258)
T PRK08628         80 KFGRIDGLVNNAG   92 (258)
T ss_pred             hcCCCCEEEECCc
Confidence               2688888885

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.28  E-value=7.7e-11  Score=95.17  Aligned_cols=85  Identities=24%  Similarity=0.258  Sum_probs=63.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK-  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~-  150 (167)
                      +..+++|+++|||+++|||.+++++|+++|++|++++|+.+ ..++...+++. .+. ++.++.+|+++.+ . ..+.. 
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-EGV-KCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCC-eEEEEEccCCCHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999864 34444444432 233 6889999999976 2 22222 


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           ..|++||+|-.
T Consensus       119 ~~~~~~iD~lI~~Ag~  134 (290)
T PRK06701        119 VRELGRLDILVNNAAF  134 (290)
T ss_pred             HHHcCCCCEEEECCcc
Confidence                 26889988753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.28  E-value=4.2e-11  Score=94.32  Aligned_cols=81  Identities=23%  Similarity=0.254  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~---  150 (167)
                      +.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++    +. .+.++++|++|.+.  ..+..   
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----GP-AAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----CC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988776655444    22 57889999999762  22221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||++..
T Consensus        77 ~~~~id~li~~ag~   90 (257)
T PRK07067         77 RFGGIDILFNNAAL   90 (257)
T ss_pred             HcCCCCEEEECCCc
Confidence               27899998753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.28  E-value=3.9e-11  Score=93.83  Aligned_cols=83  Identities=18%  Similarity=0.287  Sum_probs=65.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~----  150 (167)
                      +++|+++||||++|||++++++|+++|++|++ .+|+.+..++..++++.. +. ++.++.+|++|++. . .+..    
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GR-KALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999876 578887777777777554 33 68889999999872 2 2222    


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        ..|++||++...
T Consensus        80 ~~~id~vi~~ag~~   93 (250)
T PRK08063         80 FGRLDVFVNNAASG   93 (250)
T ss_pred             cCCCCEEEECCCCC
Confidence              278999988643

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.27  E-value=4.6e-11  Score=95.41  Aligned_cols=84  Identities=23%  Similarity=0.314  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-------HHHHHHHHHHHhCCceEEEEeccCCChhh--h
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVWVPPSRLVSAPY--N  146 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~  146 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.       +++..+++... +. ++.++++|+++.+.  .
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GG-QALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHH
Confidence            45788999999999999999999999999999999997643       34444555433 33 68889999999872  2


Q ss_pred             hhhc------cceEEEEeccC
Q 031009          147 IIYK------YSWLLVNIYVP  161 (167)
Q Consensus       147 ~~~~------~~dilvN~ai~  161 (167)
                      .+..      .+|++||++-.
T Consensus        80 ~~~~~~~~~g~id~li~~ag~  100 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCC
Confidence            2221      37899998854

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.27  E-value=4.6e-11  Score=93.21  Aligned_cols=84  Identities=21%  Similarity=0.197  Sum_probs=67.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY---  149 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~---  149 (167)
                      +.++++|+++|||+++|||+++++.|+++|++|++++|++++.++..++++.. +. ++.++++|++|.+. .. +.   
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~   79 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-GG-RAHAIAADLADPASVQRFFDAAA   79 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999988887777777543 22 68899999999762 22 21   


Q ss_pred             ---ccceEEEEecc
Q 031009          150 ---KYSWLLVNIYV  160 (167)
Q Consensus       150 ---~~~dilvN~ai  160 (167)
                         ...|+++|++-
T Consensus        80 ~~~~~id~vi~~ag   93 (250)
T PRK12939         80 AALGGLDGLVNNAG   93 (250)
T ss_pred             HHcCCCCEEEECCC
Confidence               12688888874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.27  E-value=3.2e-11  Score=88.85  Aligned_cols=79  Identities=30%  Similarity=0.387  Sum_probs=62.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC--hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc------
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK------  150 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~------  150 (167)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..++...++... + .++.++++|+++.+ .+...+      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-G-AKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-T-SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-c-ccccccccccccccccccccccccccc
Confidence            6899999999999999999999964 68889998  67777777777744 3 48999999999986 222111      


Q ss_pred             -cceEEEEeccC
Q 031009          151 -YSWLLVNIYVP  161 (167)
Q Consensus       151 -~~dilvN~ai~  161 (167)
                       .+|+++||+..
T Consensus        79 ~~ld~li~~ag~   90 (167)
T PF00106_consen   79 GPLDILINNAGI   90 (167)
T ss_dssp             SSESEEEEECSC
T ss_pred             cccccccccccc
Confidence             27888888744

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.27  E-value=3.9e-11  Score=93.64  Aligned_cols=82  Identities=20%  Similarity=0.278  Sum_probs=65.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~----  150 (167)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+..++...++..  +. ++.++.+|++|.+. ..+ ..    
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GG-RAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999998887776666543  33 68899999999872 222 11    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||++-.
T Consensus        79 ~~~~d~vi~~ag~   91 (251)
T PRK07231         79 FGSVDILVNNAGT   91 (251)
T ss_pred             hCCCCEEEECCCC
Confidence              26888888743

>PRK08643 acetoin reductase; Validated

Probab=99.27  E-value=5.3e-11  Score=93.62  Aligned_cols=80  Identities=23%  Similarity=0.307  Sum_probs=64.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~------~  151 (167)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..++...++... +. ++.++++|+++.+.  ..+..      .
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GG-KAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999988887777777543 33 68889999999862  22221      2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      +|++||++-.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            6889998843

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.26  E-value=3.5e-11  Score=95.27  Aligned_cols=81  Identities=20%  Similarity=0.273  Sum_probs=63.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhH-HHHHHHHHHHHhCCceEEEEeccCCChhh--hhhh----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAER-VDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIY----  149 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~----  149 (167)
                      -.+|+++||||++|||++++++|+++| ++|++++|+++. +++..+++....+ .++.++++|++|.+.  +.+.    
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGA-SSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCC-CceEEEEecCCChHHHHHHHHHHHh
Confidence            457899999999999999999999995 999999999886 7777777766433 268899999998762  1111    


Q ss_pred             -ccceEEEEec
Q 031009          150 -KYSWLLVNIY  159 (167)
Q Consensus       150 -~~~dilvN~a  159 (167)
                       ...|++||++
T Consensus        85 ~g~id~li~~a   95 (253)
T PRK07904         85 GGDVDVAIVAF   95 (253)
T ss_pred             cCCCCEEEEee
Confidence             1377777665

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.26  E-value=7.5e-11  Score=91.83  Aligned_cols=85  Identities=26%  Similarity=0.289  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|+++.+ ...+.+    
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-GV-KVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CC-eEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988877777777433 33 6888999999976 222221    


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         ..|++||++-..
T Consensus        81 ~~~~id~vi~~ag~~   95 (239)
T PRK07666         81 ELGSIDILINNAGIS   95 (239)
T ss_pred             HcCCccEEEEcCccc
Confidence               378899887543

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.26  E-value=5.8e-11  Score=93.93  Aligned_cols=82  Identities=26%  Similarity=0.308  Sum_probs=65.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh------
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY------  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~------  149 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.+++...++ . .+. ++.++.+|++|.+. ..+.      
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~-~~~~~~~D~~d~~~~~~~~~~~~~~   78 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-YPG-RHRWVVADLTSEAGREAVLARAREM   78 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-cCC-ceEEEEccCCCHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999999999988887776666 2 233 68889999999762 2211      


Q ss_pred             ccceEEEEeccC
Q 031009          150 KYSWLLVNIYVP  161 (167)
Q Consensus       150 ~~~dilvN~ai~  161 (167)
                      ...|++||++-.
T Consensus        79 ~~id~lv~~ag~   90 (263)
T PRK09072         79 GGINVLINNAGV   90 (263)
T ss_pred             CCCCEEEECCCC
Confidence            126888888754

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.26  E-value=6.5e-11  Score=92.58  Aligned_cols=82  Identities=26%  Similarity=0.286  Sum_probs=65.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~----  150 (167)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.  .+. ++.++++|++|.+. .. +..    
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~-~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGG-RAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999887776666654  233 68899999999762 22 221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|+++|++-.
T Consensus        79 ~~~id~vi~~ag~   91 (252)
T PRK06138         79 WGRLDVLVNNAGF   91 (252)
T ss_pred             cCCCCEEEECCCC
Confidence              37899998854

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.26  E-value=4.5e-11  Score=93.99  Aligned_cols=79  Identities=25%  Similarity=0.337  Sum_probs=63.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~------~  151 (167)
                      ||+++|||+++|||+++++.|+++|++|++++|+.+.+++..+++... +. ++.++++|++|++ ... +.+      .
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PG-QVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999988777776666543 22 6889999999976 222 211      2


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|++||++-
T Consensus        79 id~lI~~ag   87 (252)
T PRK07677         79 IDALINNAA   87 (252)
T ss_pred             ccEEEECCC
Confidence            689999874

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.26  E-value=3.1e-11  Score=98.55  Aligned_cols=80  Identities=24%  Similarity=0.210  Sum_probs=62.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhh------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIY------  149 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~------  149 (167)
                      .+|+++|||+++|||++++++|+++| ++|++++|+.++.++..+++... + .++.++.+|++|.+ .. .+.      
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-K-DSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-C-CeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 99999999998887776666422 2 25788899999986 22 111      


Q ss_pred             ccceEEEEecc
Q 031009          150 KYSWLLVNIYV  160 (167)
Q Consensus       150 ~~~dilvN~ai  160 (167)
                      ..+|++||||-
T Consensus        80 ~~iD~lI~nAG   90 (314)
T TIGR01289        80 RPLDALVCNAA   90 (314)
T ss_pred             CCCCEEEECCC
Confidence            12788888873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.26  E-value=6.1e-11  Score=94.33  Aligned_cols=84  Identities=20%  Similarity=0.289  Sum_probs=65.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~----  150 (167)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....+..++.++.+|++|.+.  ..+..    
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999999988777766666543222368889999999762  22221    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        ..|++||++.
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence              2688888874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.25  E-value=6.9e-11  Score=92.63  Aligned_cols=83  Identities=25%  Similarity=0.267  Sum_probs=66.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~-----  150 (167)
                      ++++|+++|||++++||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|++|.+. ..+.+     
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-GG-KAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998887777776543 33 68889999999772 22221     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||++-.
T Consensus        79 ~~~~d~vi~~a~~   91 (258)
T PRK12429         79 FGGVDILVNNAGI   91 (258)
T ss_pred             cCCCCEEEECCCC
Confidence              26888888743

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.25  E-value=5.3e-11  Score=93.01  Aligned_cols=80  Identities=19%  Similarity=0.237  Sum_probs=63.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh---ccceE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY---KYSWL  154 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~---~~~di  154 (167)
                      +|+++||||++|||++++++|+++|++|++++|+++..++..+++....+. ++.++++|++|.+. +. ..   ...|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAV-AVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            368999999999999999999999999999999998887777776554333 78999999999762 22 21   12588


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      ++|++-
T Consensus        80 vv~~ag   85 (243)
T PRK07102         80 VLIAVG   85 (243)
T ss_pred             EEECCc
Confidence            888763

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.25  E-value=6.1e-11  Score=93.40  Aligned_cols=84  Identities=23%  Similarity=0.255  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|++|.+. .. +..   
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GG-QAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988887777777543 33 58888999999872 22 111   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||++..
T Consensus        85 ~~~~~d~li~~ag~   98 (255)
T PRK06113         85 KLGKVDILVNNAGG   98 (255)
T ss_pred             HcCCCCEEEECCCC
Confidence               26888888753

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.25  E-value=3.1e-11  Score=95.30  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=61.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~------~  151 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  . ++.++++|++|.+ . +.+..      .
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999988776665555321  2 6889999999976 2 22221      1


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      +|++|||+-.
T Consensus        79 id~lv~~ag~   88 (257)
T PRK07024         79 PDVVIANAGI   88 (257)
T ss_pred             CCEEEECCCc
Confidence            6899998853

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.25  E-value=3.7e-11  Score=94.91  Aligned_cols=76  Identities=34%  Similarity=0.480  Sum_probs=61.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-------ccce
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-------KYSW  153 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-------~~~d  153 (167)
                      +++|||+++|||++++++|+++|++|++++|+++.+++..+++... +  ++.++++|++|.+ .+.+.       ..+|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-G--EVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C--CceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999998888887777543 2  4788999999976 22221       1278


Q ss_pred             EEEEecc
Q 031009          154 LLVNIYV  160 (167)
Q Consensus       154 ilvN~ai  160 (167)
                      ++|||+-
T Consensus        79 ~li~naG   85 (259)
T PRK08340         79 ALVWNAG   85 (259)
T ss_pred             EEEECCC
Confidence            9999874

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.25  E-value=8e-11  Score=91.89  Aligned_cols=80  Identities=26%  Similarity=0.265  Sum_probs=62.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh------
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY------  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~------  149 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++    +. ++.++++|++|.+. ..+.      
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GE-SALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999877665544443    33 57889999998762 1111      


Q ss_pred             -ccceEEEEeccC
Q 031009          150 -KYSWLLVNIYVP  161 (167)
Q Consensus       150 -~~~dilvN~ai~  161 (167)
                       ...|++||++-.
T Consensus        78 ~~~id~vi~~ag~   90 (249)
T PRK06500         78 FGRLDAVFINAGV   90 (249)
T ss_pred             hCCCCEEEECCCC
Confidence             126899998854

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.24  E-value=5.1e-11  Score=94.65  Aligned_cols=81  Identities=22%  Similarity=0.290  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc--
Q 031009           77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK--  150 (167)
Q Consensus        77 ~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~--  150 (167)
                      .+++|+++||||  ++|||++++++|+++|++|++.+|... .++..+++.+..+.  ..++++|++|++ .+ .+..  
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS--DLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC--cceeeccCCCHHHHHHHHHHHH
Confidence            478999999996  689999999999999999999876522 22233444433333  346889999986 22 2211  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++||||-
T Consensus        80 ~~~g~iD~lvnnAG   93 (260)
T PRK06997         80 QHWDGLDGLVHSIG   93 (260)
T ss_pred             HHhCCCcEEEEccc
Confidence                2789999884

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.24  E-value=1e-10  Score=92.14  Aligned_cols=81  Identities=17%  Similarity=0.172  Sum_probs=64.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~------~  151 (167)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....+..++.++.+|+++.+. . .+.+      .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999988887777777655442368899999998762 2 1211      2


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|++||++-
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            688888874

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.24  E-value=9.6e-11  Score=92.01  Aligned_cols=83  Identities=25%  Similarity=0.275  Sum_probs=62.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h----hhh-
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N----IIY-  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~----~~~-  149 (167)
                      ++++|+++|||+++|||++++++|+++|++|++.+ ++.+..++...++... +. ++..+++|+++.+. .    ... 
T Consensus         1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GG-SAFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-CC-ceEEEecccCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999998875 5666677666676543 33 57788999998651 1    111 


Q ss_pred             --------ccceEEEEeccC
Q 031009          150 --------KYSWLLVNIYVP  161 (167)
Q Consensus       150 --------~~~dilvN~ai~  161 (167)
                              ...|++||||-.
T Consensus        79 ~~~~~~g~~~id~lv~~Ag~   98 (252)
T PRK12747         79 ELQNRTGSTKFDILINNAGI   98 (252)
T ss_pred             HhhhhcCCCCCCEEEECCCc
Confidence                    137889998853

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.24  E-value=6.7e-11  Score=92.50  Aligned_cols=80  Identities=21%  Similarity=0.255  Sum_probs=60.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~----  150 (167)
                      ++++|+++|||+++|||.+++++|+++|++|++++|+..  ++..++++.. +. ++.++++|+++.+. . .+..    
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-GR-RFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-CC-ceEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998752  3333444332 33 58889999999762 2 1111    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        ..|++||++-
T Consensus        78 ~~~~d~li~~ag   89 (248)
T TIGR01832        78 FGHIDILVNNAG   89 (248)
T ss_pred             cCCCCEEEECCC
Confidence              2788888874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.23  E-value=7.4e-11  Score=93.03  Aligned_cols=83  Identities=23%  Similarity=0.303  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~---  150 (167)
                      .++++|+++|||+++|||.+++++|+++|++|++++|+.++++...+++... +. ++.++++|++|.+ . ..+..   
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~-~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-GI-DALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988877766666543 32 5788999999976 2 11111   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||++.
T Consensus        86 ~~~~id~vi~~ag   98 (259)
T PRK08213         86 RFGHVDILVNNAG   98 (259)
T ss_pred             HhCCCCEEEECCC
Confidence               2688888874

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.2e-10  Score=91.96  Aligned_cols=83  Identities=24%  Similarity=0.278  Sum_probs=62.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~---  150 (167)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+ ..+..+++... +. ++.++.+|+++.+ ...+ .+   
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GH-RCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999874 34444555432 32 5788999999976 2222 21   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||++..
T Consensus        79 ~~~~id~vi~~ag~   92 (263)
T PRK08226         79 KEGRIDILVNNAGV   92 (263)
T ss_pred             HcCCCCEEEECCCc
Confidence               26888888854

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.1e-10  Score=91.19  Aligned_cols=83  Identities=25%  Similarity=0.272  Sum_probs=62.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~----  150 (167)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+ ..++...+++.. +. ++.++++|++|.+. ..+.+    
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-GG-RASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999998753 455555555443 33 57889999999772 22211    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||++..
T Consensus        81 ~~~~~d~vi~~ag~   94 (248)
T PRK07806         81 EFGGLDALVLNASG   94 (248)
T ss_pred             hCCCCcEEEECCCC
Confidence               26888888743

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.22  E-value=7.4e-11  Score=91.97  Aligned_cols=83  Identities=23%  Similarity=0.314  Sum_probs=64.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh---hhh----hh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP---YNI----IY  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~---~~~----~~  149 (167)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....+. ++.++.+|+++..   ...    +.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHP-EPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCC-CcceEEeeecccchHHHHHHHHHHH
Confidence            578899999999999999999999999999999999998887777777554332 5677889987531   111    11


Q ss_pred             ----ccceEEEEecc
Q 031009          150 ----KYSWLLVNIYV  160 (167)
Q Consensus       150 ----~~~dilvN~ai  160 (167)
                          ...|++||++-
T Consensus        82 ~~~~~~id~vi~~ag   96 (239)
T PRK08703         82 EATQGKLDGIVHCAG   96 (239)
T ss_pred             HHhCCCCCEEEEecc
Confidence                23688888875

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.6e-10  Score=90.73  Aligned_cols=83  Identities=23%  Similarity=0.253  Sum_probs=66.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+.+++...++.... . ++.++.+|+++.+ ... ...    
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~-~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG-G-AAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-C-cEEEEEecCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999999988877777765442 2 5788999999876 222 211    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||++-.
T Consensus        84 ~~~~d~li~~ag~   96 (258)
T PRK06949         84 AGTIDILVNNSGV   96 (258)
T ss_pred             cCCCCEEEECCCC
Confidence              26888888753

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.22  E-value=9.6e-11  Score=93.37  Aligned_cols=83  Identities=20%  Similarity=0.151  Sum_probs=64.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh-hhhc------
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN-IIYK------  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~-~~~~------  150 (167)
                      +++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++.......++.++.+|++|.+.. .+..      
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   80 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG   80 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999887777666554432223688999999997722 1222      


Q ss_pred             cceEEEEecc
Q 031009          151 YSWLLVNIYV  160 (167)
Q Consensus       151 ~~dilvN~ai  160 (167)
                      ..|++||++.
T Consensus        81 ~id~vv~~ag   90 (280)
T PRK06914         81 RIDLLVNNAG   90 (280)
T ss_pred             CeeEEEECCc
Confidence            2588888874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.22  E-value=1.2e-10  Score=90.93  Aligned_cols=82  Identities=20%  Similarity=0.212  Sum_probs=65.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~----  150 (167)
                      ++++|+++|||+++|||+++++.|+++|++|++++|+.+++++..+++... +. ++.++++|+++.+.  +.+..    
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-GT-EVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887777776543 33 68889999998752  11221    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||++-
T Consensus        80 ~~~id~vi~~ag   91 (253)
T PRK08217         80 FGQLNGLINNAG   91 (253)
T ss_pred             cCCCCEEEECCC
Confidence              2688888874

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.2e-10  Score=90.79  Aligned_cols=81  Identities=27%  Similarity=0.275  Sum_probs=64.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK------  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~------  150 (167)
                      ++|+++|||+++|||++++++|+++|++|++++|+++..++..+++... +. ++.++.+|++|.+.  ..+..      
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-GV-KAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-CC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999988777766666543 33 58889999999762  22221      


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||++..
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            27899988753

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.3e-10  Score=91.17  Aligned_cols=82  Identities=24%  Similarity=0.320  Sum_probs=62.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhh----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIY----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~----  149 (167)
                      ++++|+++|||+++|||.+++++|+++|++|++. .|+.+..++...++... +. ++.++++|++|.+.  ..+.    
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-GG-KAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-cEEEEEcCcCCHHHHHHHHHHHHH
Confidence            5778999999999999999999999999998775 67777666666665432 22 58889999999762  2222    


Q ss_pred             --------ccceEEEEecc
Q 031009          150 --------KYSWLLVNIYV  160 (167)
Q Consensus       150 --------~~~dilvN~ai  160 (167)
                              ...|+++|++.
T Consensus        81 ~~~~~~~~~~id~vi~~ag   99 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAG   99 (254)
T ss_pred             HhccccCCCCccEEEECCC
Confidence                    13688888874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.21  E-value=1.8e-10  Score=89.80  Aligned_cols=83  Identities=18%  Similarity=0.202  Sum_probs=65.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~----  150 (167)
                      ++++|+++||||+++||++++++|+++|++|++++|+.++..+...++... +. ++.++.+|++|.+ ..... .    
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-GG-KARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999988777766666543 33 5888999999976 22221 1    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|+++|++-.
T Consensus        81 ~~~~d~vi~~ag~   93 (251)
T PRK12826         81 FGRLDILVANAGI   93 (251)
T ss_pred             hCCCCEEEECCCC
Confidence              36888888743

>PRK07985 oxidoreductase; Provisional

Probab=99.21  E-value=2.2e-10  Score=92.65  Aligned_cols=83  Identities=20%  Similarity=0.268  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh--hHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc-
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK-  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~-  150 (167)
                      .++++|+++||||++|||++++++|+++|++|++.+|+.  +..+++.+.+.. .+. ++.++.+|++|.+ .. .+.. 
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-CGR-KAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-cCC-eEEEEEccCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999999988653  334444444432 233 5788999999976 21 1111 


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++|||+-
T Consensus       123 ~~~~g~id~lv~~Ag  137 (294)
T PRK07985        123 HKALGGLDIMALVAG  137 (294)
T ss_pred             HHHhCCCCEEEECCC
Confidence                 2688888874

>PRK06398 aldose dehydrogenase; Validated

Probab=99.21  E-value=6.3e-11  Score=93.80  Aligned_cols=72  Identities=22%  Similarity=0.127  Sum_probs=57.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      +++||+++|||+++|||++++++|+++|++|++++|+.+..             .++.++++|++|.+ ... +.+    
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999976421             14788999999976 222 221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        70 ~~~id~li~~Ag~   82 (258)
T PRK06398         70 YGRIDILVNNAGI   82 (258)
T ss_pred             cCCCCEEEECCCC
Confidence              27899998754

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.21  E-value=1.7e-10  Score=100.74  Aligned_cols=86  Identities=21%  Similarity=0.186  Sum_probs=66.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh----C---CceEEEEeccCCChh-hh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----G---EQHVWVPPSRLVSAP-YN  146 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~----~---~~~~~~~~~Dv~d~~-~~  146 (167)
                      ..+.+||+++||||+||||++++++|+++|++|++++|+.++++++..++....    +   ..++.++.+|++|.+ ..
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            346788999999999999999999999999999999999988777666554311    1   125788999999976 33


Q ss_pred             hhhccceEEEEecc
Q 031009          147 IIYKYSWLLVNIYV  160 (167)
Q Consensus       147 ~~~~~~dilvN~ai  160 (167)
                      ......|++||++-
T Consensus       155 ~aLggiDiVVn~AG  168 (576)
T PLN03209        155 PALGNASVVICCIG  168 (576)
T ss_pred             HHhcCCCEEEEccc
Confidence            34445778888763

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.21  E-value=1.1e-10  Score=91.94  Aligned_cols=82  Identities=16%  Similarity=0.174  Sum_probs=61.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~--  150 (167)
                      .++++||+++|||+++|||++++++|+++|++|++.++...  ++..+++... +. ++.++++|++|.+ . ..+.+  
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~   80 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-GR-RFLSLTADLRKIDGIPALLERAV   80 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999887542  3334445432 33 6888999999976 2 22222  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          ..|++||||-
T Consensus        81 ~~~~~~D~li~~Ag   94 (253)
T PRK08993         81 AEFGHIDILVNNAG   94 (253)
T ss_pred             HHhCCCCEEEECCC
Confidence                2789999884

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.9e-10  Score=89.18  Aligned_cols=82  Identities=24%  Similarity=0.288  Sum_probs=65.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+++..++..+++...   ..+.++++|+++.+ ... +..    
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877776766543   25888999999876 222 221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|+++|++-.
T Consensus        80 ~~~~d~vi~~ag~   92 (237)
T PRK07326         80 FGGLDVLIANAGV   92 (237)
T ss_pred             cCCCCEEEECCCC
Confidence              37889988754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.20  E-value=1.4e-10  Score=91.56  Aligned_cols=83  Identities=23%  Similarity=0.239  Sum_probs=63.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++.+|+. +..++..++++.. +. ++.++.+|++|.+. .. +..   
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-GG-EAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CC-eEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999988854 4455555666543 33 68889999999762 22 111   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||++-.
T Consensus        82 ~~g~id~lv~~ag~   95 (261)
T PRK08936         82 EFGTLDVMINNAGI   95 (261)
T ss_pred             HcCCCCEEEECCCC
Confidence               26888888753

>PRK09135 pteridine reductase; Provisional

Probab=99.20  E-value=1.5e-10  Score=90.09  Aligned_cols=83  Identities=22%  Similarity=0.142  Sum_probs=62.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      ..++|+++|||+++|||+.++++|+++|++|++++|+. +..++...++....+. .+.++.+|++|.+ ... +..   
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPG-SAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999864 4445554555443333 5888999999977 222 222   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|+++|++-
T Consensus        82 ~~~~~d~vi~~ag   94 (249)
T PRK09135         82 AFGRLDALVNNAS   94 (249)
T ss_pred             HcCCCCEEEECCC
Confidence               2688888875

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.6e-10  Score=91.17  Aligned_cols=82  Identities=22%  Similarity=0.308  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~---  150 (167)
                      +..+|+++|||+++|||++++++|+++|++|+++++. .+..+++..++... +. ++.++.+|++|.+. . .+.+   
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-GR-RAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CC-eEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999999887764 45555555555443 33 68889999999762 2 2221   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||++-
T Consensus        84 ~~~~iD~vi~~ag   96 (258)
T PRK09134         84 ALGPITLLVNNAS   96 (258)
T ss_pred             HcCCCCEEEECCc
Confidence               2689999884

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.1e-10  Score=91.77  Aligned_cols=76  Identities=29%  Similarity=0.351  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~---  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.      +   ..+. .+.++++|+++.+ ...+. .   
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~---~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T---VDGR-PAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h---hcCC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998654      1   1122 5788999999976 22222 1   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++|||+-.
T Consensus        72 ~~~~id~vi~~ag~   85 (252)
T PRK07856         72 RHGRLDVLVNNAGG   85 (252)
T ss_pred             HcCCCCEEEECCCC
Confidence               16899998853

>PRK06484 short chain dehydrogenase; Validated

Probab=99.20  E-value=1.7e-10  Score=99.80  Aligned_cols=79  Identities=29%  Similarity=0.376  Sum_probs=62.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      ...+|+++||||++|||++++++|+++|++|++++|+.+.++++.+++    +. ++..+.+|++|.+ ... +..    
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GD-EHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999988776655443    33 5778899999986 222 221    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||||-
T Consensus       341 ~g~id~li~nAg  352 (520)
T PRK06484        341 WGRLDVLVNNAG  352 (520)
T ss_pred             cCCCCEEEECCC
Confidence              1789998874

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.19  E-value=1.3e-10  Score=91.67  Aligned_cols=63  Identities=22%  Similarity=0.349  Sum_probs=54.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +++|||+++|||++++++|++    +|++|++++|+.+.+++..+++....+..++.++.+|++|.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~   68 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEA   68 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHH
Confidence            689999999999999999997    799999999999988888888865332336888999999976

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.19  E-value=5.6e-11  Score=94.03  Aligned_cols=81  Identities=19%  Similarity=0.032  Sum_probs=59.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhccc
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYKYS  152 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~~~  152 (167)
                      ....+++|+++||||++|||++++++|+++|++|++++|+.....+   +. .. ..  ..++.+|++|.+. .......
T Consensus         8 ~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~-~~--~~~~~~D~~~~~~~~~~~~~i   80 (245)
T PRK12367          8 AQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE-SP--NEWIKWECGKEESLDKQLASL   80 (245)
T ss_pred             hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc-CC--CeEEEeeCCCHHHHHHhcCCC
Confidence            3446889999999999999999999999999999999998632111   11 11 12  2567899998773 3333348


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||||-.
T Consensus        81 DilVnnAG~   89 (245)
T PRK12367         81 DVLILNHGI   89 (245)
T ss_pred             CEEEECCcc
Confidence            899998843

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.18  E-value=2.5e-10  Score=89.16  Aligned_cols=81  Identities=20%  Similarity=0.251  Sum_probs=64.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc------
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK------  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~------  150 (167)
                      +++|+++||||++|||++++++|+++|++|++.+|+.+..++...++... +. ++.++++|++|.+. +...+      
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-GG-NAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999988877776666543 33 58889999998762 22211      


Q ss_pred             -cceEEEEecc
Q 031009          151 -YSWLLVNIYV  160 (167)
Q Consensus       151 -~~dilvN~ai  160 (167)
                       ..|++||++-
T Consensus        79 ~~~d~vi~~ag   89 (250)
T TIGR03206        79 GPVDVLVNNAG   89 (250)
T ss_pred             CCCCEEEECCC
Confidence             2688888884

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.18  E-value=2.7e-10  Score=102.07  Aligned_cols=85  Identities=16%  Similarity=0.224  Sum_probs=68.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+...+..+++|++|.+ ... +.+    
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999998888777777765444335788999999976 222 221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence              27898998853

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.18  E-value=8.7e-11  Score=95.92  Aligned_cols=49  Identities=27%  Similarity=0.398  Sum_probs=43.1

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHH
Q 031009           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        76 ~~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      ++++||+++|||+  ++|||+++|+.|+++|++|++ +|+.+++++...++.
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~   55 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLR   55 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhh
Confidence            4599999999999  899999999999999999998 788787777766664

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.17  E-value=1.6e-10  Score=90.57  Aligned_cols=83  Identities=22%  Similarity=0.328  Sum_probs=63.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCC--hh-hh----hhh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS--AP-YN----IIY  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d--~~-~~----~~~  149 (167)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++....+. ++.++.+|+++  .. ..    .+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP-QPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEecccCCCHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999998887777777654333 56777778863  22 11    111


Q ss_pred             c---cceEEEEecc
Q 031009          150 K---YSWLLVNIYV  160 (167)
Q Consensus       150 ~---~~dilvN~ai  160 (167)
                      +   ..|++||+|-
T Consensus        88 ~~~~~id~vi~~Ag  101 (247)
T PRK08945         88 EQFGRLDGVLHNAG  101 (247)
T ss_pred             HHhCCCCEEEECCc
Confidence            1   2688888874

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.17  E-value=1.7e-10  Score=91.58  Aligned_cols=79  Identities=22%  Similarity=0.205  Sum_probs=59.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChhh------hhhh----
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY------NIIY----  149 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~------~~~~----  149 (167)
                      ++++||||++|||++++++|+++|++|++++| +++.+++..+++....+. ++.++.+|++|.+.      ....    
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPN-SAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCC-ceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            58999999999999999999999999999765 456666666666543333 56778999999751      1111    


Q ss_pred             --ccceEEEEecc
Q 031009          150 --KYSWLLVNIYV  160 (167)
Q Consensus       150 --~~~dilvN~ai  160 (167)
                        ...|++||||-
T Consensus        81 ~~g~iD~lv~nAG   93 (267)
T TIGR02685        81 AFGRCDVLVNNAS   93 (267)
T ss_pred             ccCCceEEEECCc
Confidence              12789998873

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.8e-10  Score=102.05  Aligned_cols=85  Identities=28%  Similarity=0.321  Sum_probs=68.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~--  150 (167)
                      ...+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++... +. ++.++.+|++|.+ .. .+..  
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-GG-TAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888887777554 33 5888999999976 22 2221  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|++||||-.
T Consensus       444 ~~~g~id~li~~Ag~  458 (657)
T PRK07201        444 AEHGHVDYLVNNAGR  458 (657)
T ss_pred             HhcCCCCEEEECCCC
Confidence                27899998853

>PRK06484 short chain dehydrogenase; Validated

Probab=99.17  E-value=1.5e-10  Score=100.13  Aligned_cols=79  Identities=28%  Similarity=0.339  Sum_probs=62.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~----  150 (167)
                      ..++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ . ..+..    
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GP-DHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEeccCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988776655544    33 5778999999976 2 22211    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++|||+-
T Consensus        77 ~g~iD~li~nag   88 (520)
T PRK06484         77 FGRIDVLVNNAG   88 (520)
T ss_pred             hCCCCEEEECCC
Confidence              2788999874

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.17  E-value=2.2e-10  Score=91.17  Aligned_cols=80  Identities=19%  Similarity=0.163  Sum_probs=62.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~  152 (167)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ...++++|++|.+. .. ...      ..
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT-VPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999988887777777654332 45668999999762 11 111      16


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||++-.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            888988854

>PRK06182 short chain dehydrogenase; Validated

Probab=99.17  E-value=1.6e-10  Score=91.91  Aligned_cols=76  Identities=20%  Similarity=0.173  Sum_probs=59.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-------  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-------  150 (167)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+++++.    ..   . .+.++.+|++|.+ .....+       
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~----~~---~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL----AS---L-GVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh---C-CCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999998765432    11   1 3678899999976 222221       


Q ss_pred             cceEEEEeccCc
Q 031009          151 YSWLLVNIYVPS  162 (167)
Q Consensus       151 ~~dilvN~ai~~  162 (167)
                      ..|++|||+-..
T Consensus        74 ~id~li~~ag~~   85 (273)
T PRK06182         74 RIDVLVNNAGYG   85 (273)
T ss_pred             CCCEEEECCCcC
Confidence            378999988554

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.17  E-value=2.5e-10  Score=88.21  Aligned_cols=82  Identities=24%  Similarity=0.216  Sum_probs=62.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~--  150 (167)
                      ++++++|+++|||++++||++++++|+++|++|++++|+.++..+..+++...    ...++.+|+.|.+. .. +..  
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999887766655555432    35667899998762 22 211  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          ..|+++|++-
T Consensus        78 ~~~~~~d~vi~~ag   91 (239)
T PRK12828         78 RQFGRLDALVNIAG   91 (239)
T ss_pred             HHhCCcCEEEECCc
Confidence                2688888764

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.17  E-value=8.9e-11  Score=89.52  Aligned_cols=81  Identities=20%  Similarity=0.184  Sum_probs=65.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhcc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYKY---  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~~---  151 (167)
                      +++.|+++||||++|||+++++.|+++|++|.++|++.+..++....|...   .+...+.|||++.. .+. +.+.   
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHh
Confidence            577899999999999999999999999999999999998888877777432   24677899999876 222 2221   


Q ss_pred             ---ceEEEEecc
Q 031009          152 ---SWLLVNIYV  160 (167)
Q Consensus       152 ---~dilvN~ai  160 (167)
                         .+++||+|-
T Consensus        88 ~g~psvlVncAG   99 (256)
T KOG1200|consen   88 LGTPSVLVNCAG   99 (256)
T ss_pred             cCCCcEEEEcCc
Confidence               899999883

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.17  E-value=2.8e-10  Score=88.99  Aligned_cols=80  Identities=20%  Similarity=0.358  Sum_probs=59.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~--  150 (167)
                      +++++|+++||||++|||+++++.|+++|++|++.++ +.+..++...++    +. ++.++++|++|.+. . .+..  
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----GD-RAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CC-ceEEEEcCCCCHHHHHHHHHHHH
Confidence            3578899999999999999999999999999988765 444443333322    33 68889999999762 2 2221  


Q ss_pred             ----c-ceEEEEecc
Q 031009          151 ----Y-SWLLVNIYV  160 (167)
Q Consensus       151 ----~-~dilvN~ai  160 (167)
                          . .|++|||+.
T Consensus        76 ~~~g~~id~li~~ag   90 (253)
T PRK08642         76 EHFGKPITTVVNNAL   90 (253)
T ss_pred             HHhCCCCeEEEECCC
Confidence                1 799999884

>PRK05855 short chain dehydrogenase; Validated

Probab=99.17  E-value=2.5e-10  Score=99.06  Aligned_cols=84  Identities=18%  Similarity=0.172  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~---  150 (167)
                      ..+.+++++||||++|||++++++|+++|++|++++|+.+.++++.++++.. +. ++.++.+|++|.+. . .+..   
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-GA-VAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4567889999999999999999999999999999999998888887777554 33 68899999999862 2 2221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus       389 ~~g~id~lv~~Ag~  402 (582)
T PRK05855        389 EHGVPDIVVNNAGI  402 (582)
T ss_pred             hcCCCcEEEECCcc
Confidence               17999998854

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.17  E-value=2.8e-10  Score=89.28  Aligned_cols=80  Identities=24%  Similarity=0.182  Sum_probs=62.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-ccceEEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-KYSWLLVN  157 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~~~dilvN  157 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+..... +. ++.++.+|++|.+ ..... ...|++||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~id~vi~   79 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GL-ALRVEKLDLTDAIDRAQAAEWDVDVLLN   79 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence            578999999999999999999999999999999987766655544332 33 5888999999976 22222 25788888


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      |+-.
T Consensus        80 ~ag~   83 (257)
T PRK09291         80 NAGI   83 (257)
T ss_pred             CCCc
Confidence            8754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.17  E-value=2.5e-10  Score=88.46  Aligned_cols=83  Identities=24%  Similarity=0.294  Sum_probs=65.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++|||++++||..++++|+++|++|++++|+++..++...++... +. ++.++.+|++|.+ ...+.+     
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-GG-EARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            466789999999999999999999999999999999988877766666543 33 5888899999876 222211     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|.++|++-.
T Consensus        80 ~~~id~vi~~ag~   92 (246)
T PRK05653         80 FGALDILVNNAGI   92 (246)
T ss_pred             hCCCCEEEECCCc
Confidence              15888888743

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.16  E-value=3.7e-10  Score=87.95  Aligned_cols=84  Identities=20%  Similarity=0.238  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~--  150 (167)
                      +++++|+++|||+++|||+++++.|+++|++|+++.++.+ ..++..+++... +. ++.++.+|+++.+ . +.+.+  
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GG-RAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999988877543 445555555443 33 6889999999976 2 22221  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|+++|++-.
T Consensus        79 ~~~~~id~vi~~ag~   93 (245)
T PRK12937         79 TAFGRIDVLVNNAGV   93 (245)
T ss_pred             HHcCCCCEEEECCCC
Confidence                26888888743

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.16  E-value=1.8e-10  Score=90.88  Aligned_cols=77  Identities=19%  Similarity=0.183  Sum_probs=60.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh-------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY-------KY  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~-------~~  151 (167)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++...++.   +. ++.++++|++|.+. .. +.       ..
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AG-NAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CC-ceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999887766655443   22 68899999999762 21 11       12


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      +|++||++-.
T Consensus        78 id~vi~~ag~   87 (260)
T PRK08267         78 LDVLFNNAGI   87 (260)
T ss_pred             CCEEEECCCC
Confidence            5888888743

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.16  E-value=3.6e-10  Score=89.11  Aligned_cols=84  Identities=17%  Similarity=0.234  Sum_probs=60.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC----hhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----AERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIY  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~  149 (167)
                      +.+++|+++|||+++|||+++++.|+++|++|++++++    .+..++..+++... +. ++.++++|+++.+. . .+.
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-GA-KAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-CC-cEEEEecCcCCHHHHHHHHH
Confidence            35788999999999999999999999999997776643    23444455555433 33 58889999999862 2 222


Q ss_pred             c------cceEEEEeccC
Q 031009          150 K------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~------~~dilvN~ai~  161 (167)
                      .      .+|++||++-.
T Consensus        82 ~~~~~~~~id~li~~ag~   99 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGK   99 (257)
T ss_pred             HHHHhhCCCCEEEECCcc
Confidence            1      26888888743

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.15  E-value=2.8e-10  Score=88.90  Aligned_cols=82  Identities=17%  Similarity=0.115  Sum_probs=60.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~----  150 (167)
                      +++|+++|||+++|||++++++|+++|++|++. +++.+..++..+++... +. ++.++.+|++|.+ . ..+.+    
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-GF-DFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999998885 44455555555555433 32 5778899999976 2 22211    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||++-.
T Consensus        79 ~~~id~li~~ag~   91 (246)
T PRK12938         79 VGEIDVLVNNAGI   91 (246)
T ss_pred             hCCCCEEEECCCC
Confidence              27899998853

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.15  E-value=4e-10  Score=89.51  Aligned_cols=79  Identities=20%  Similarity=0.256  Sum_probs=63.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc-------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK-------YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~-------~~  152 (167)
                      |+++||||++|||++++++|+++|++|++.+|+.+.+++...++... +. ++.++++|++|.+. ..+.+       ..
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-GG-DGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999998888887777654 33 58889999998762 22211       27


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||++-.
T Consensus        79 d~lI~~ag~   87 (270)
T PRK05650         79 DVIVNNAGV   87 (270)
T ss_pred             CEEEECCCC
Confidence            889998754

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.15  E-value=4.2e-10  Score=88.32  Aligned_cols=82  Identities=22%  Similarity=0.195  Sum_probs=61.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      ++++++|+++||||++|||.+++++|+++|++|++++|+.+.. +...++.   +. ++.++++|+++.+ ... +..  
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~---~~-~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL---GG-NAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh---CC-ceEEEEecCCCHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999987532 2223321   22 5778999999876 222 211  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|++||++-.
T Consensus        85 ~~~~~~d~vi~~ag~   99 (255)
T PRK06841         85 SAFGRIDILVNSAGV   99 (255)
T ss_pred             HHhCCCCEEEECCCC
Confidence                26889998854

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.14  E-value=5.1e-10  Score=88.44  Aligned_cols=83  Identities=24%  Similarity=0.324  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCC-----------hhHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        76 ~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      ..++||+++|||++  +|||++++++|+++|++|++.++.           .+..++..++++.. +. ++.++++|++|
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~D~~~   79 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-GV-KVSSMELDLTQ   79 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-CC-eEEEEEcCCCC
Confidence            36889999999999  499999999999999999987542           22233344444432 33 68899999999


Q ss_pred             hhh--hhhhc------cceEEEEecc
Q 031009          143 APY--NIIYK------YSWLLVNIYV  160 (167)
Q Consensus       143 ~~~--~~~~~------~~dilvN~ai  160 (167)
                      .+.  ..+.+      .+|++|||+-
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCC
Confidence            762  22211      1688888874

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.14  E-value=4.1e-10  Score=88.60  Aligned_cols=84  Identities=26%  Similarity=0.353  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~--  150 (167)
                      ..+++|+++|||+++|||+.++++|+++|++ |++++|+.+...+...++... +. ++.++.+|+++.+.  +.+..  
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-GA-KAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-CC-eEEEEEccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999 999999987776666666432 33 68889999998762  22211  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|+++|++-.
T Consensus        80 ~~~g~id~li~~ag~   94 (260)
T PRK06198         80 EAFGRLDALVNAAGL   94 (260)
T ss_pred             HHhCCCCEEEECCCc
Confidence                26888888753

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.9e-10  Score=91.00  Aligned_cols=77  Identities=26%  Similarity=0.297  Sum_probs=60.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhh-----ccc
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIY-----KYS  152 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~-----~~~  152 (167)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..++++.. +. ++.++++|++|.+ . ..+.     ..+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-GF-DVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            578999998 699999999996 8999999999988887777777543 33 6888999999976 2 2221     127


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |++||||-
T Consensus        78 d~li~nAG   85 (275)
T PRK06940         78 TGLVHTAG   85 (275)
T ss_pred             CEEEECCC
Confidence            88998874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.14  E-value=4.2e-10  Score=87.93  Aligned_cols=83  Identities=25%  Similarity=0.332  Sum_probs=62.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~---  150 (167)
                      ++++|+++|||+++|||.+++++|+++|++|++..+ +++..++..+++... +. ++.++++|+++.+ . ..+.+   
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GH-DVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999987654 455566665666543 33 6889999999976 2 22222   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|+++|++-.
T Consensus        81 ~~~~id~vi~~ag~   94 (247)
T PRK12935         81 HFGKVDILVNNAGI   94 (247)
T ss_pred             HcCCCCEEEECCCC
Confidence               16888888743

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.14  E-value=5.3e-10  Score=86.94  Aligned_cols=84  Identities=25%  Similarity=0.290  Sum_probs=66.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~----  150 (167)
                      .+++|+++||||++|||.+++++|+++|++|+++ +|+.+..++..+++... +. ++.++.+|++|.+. ..+.+    
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-GG-DAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHH
Confidence            4778999999999999999999999999999998 99888777766666542 33 68899999999762 22221    


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         ..|++||++-..
T Consensus        80 ~~~~id~vi~~ag~~   94 (247)
T PRK05565         80 KFGKIDILVNNAGIS   94 (247)
T ss_pred             HhCCCCEEEECCCcC
Confidence               378888887544

>PRK12743 oxidoreductase; Provisional

Probab=99.14  E-value=3.7e-10  Score=89.03  Aligned_cols=80  Identities=23%  Similarity=0.181  Sum_probs=60.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc-----
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK-----  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~-----  150 (167)
                      ++|+++||||++|||++++++|+++|++|+++++ +.+..++..+++... +. ++.++.+|+++.+. +. +.+     
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GV-RAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3679999999999999999999999999988865 555566666666543 33 68899999999762 12 211     


Q ss_pred             -cceEEEEecc
Q 031009          151 -YSWLLVNIYV  160 (167)
Q Consensus       151 -~~dilvN~ai  160 (167)
                       ..|++||++-
T Consensus        79 ~~id~li~~ag   89 (256)
T PRK12743         79 GRIDVLVNNAG   89 (256)
T ss_pred             CCCCEEEECCC
Confidence             2688888774

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.14  E-value=4.3e-10  Score=89.83  Aligned_cols=80  Identities=23%  Similarity=0.120  Sum_probs=60.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc-----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK-----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~-----  150 (167)
                      +.+|+++||||+||||++++++|+++|++|++++|+.+.++...    ...+. ++.++.+|++|.+. ... ..     
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~----~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFE----ALHPD-RALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHH----hhcCC-CeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999987654432    22232 57888999999862 222 21     


Q ss_pred             -cceEEEEeccCc
Q 031009          151 -YSWLLVNIYVPS  162 (167)
Q Consensus       151 -~~dilvN~ai~~  162 (167)
                       ..|++||++-..
T Consensus        77 ~~~d~vv~~ag~~   89 (277)
T PRK06180         77 GPIDVLVNNAGYG   89 (277)
T ss_pred             CCCCEEEECCCcc
Confidence             268999988653

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.13  E-value=2.8e-10  Score=89.60  Aligned_cols=77  Identities=22%  Similarity=0.256  Sum_probs=59.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-IIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~~~----  150 (167)
                      .++||+++||||++|||.+++++|+++|++|++++|+.+..++..+++    +   ..++++|+++.+. . .+..    
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----G---GLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C---CcEEEeeCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999877665544433    1   2567899999762 2 2221    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||++-
T Consensus        77 ~~~id~vi~~ag   88 (255)
T PRK06057         77 YGSVDIAFNNAG   88 (255)
T ss_pred             cCCCCEEEECCC
Confidence              2688888874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.13  E-value=6.7e-10  Score=86.37  Aligned_cols=81  Identities=25%  Similarity=0.267  Sum_probs=62.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-h----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-Y----  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~----  149 (167)
                      .++++|+++|||+++|||++++++|+++|+.|++.+|+.+.+++...++    +. ++.++.+|+++.+. ..+ .    
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GE-RVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999887766544333    22 57889999998762 222 1    


Q ss_pred             --ccceEEEEeccC
Q 031009          150 --KYSWLLVNIYVP  161 (167)
Q Consensus       150 --~~~dilvN~ai~  161 (167)
                        ...|++||++..
T Consensus        77 ~~~~id~vi~~ag~   90 (245)
T PRK12936         77 DLEGVDILVNNAGI   90 (245)
T ss_pred             HcCCCCEEEECCCC
Confidence              127899998854

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.13  E-value=4.3e-10  Score=88.53  Aligned_cols=79  Identities=30%  Similarity=0.295  Sum_probs=58.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~---  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++.+++.+..   .+++...    .+.++.+|++|++ ...+ ..   
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999887655432   2333222    3678899999986 2222 21   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||++-.
T Consensus        76 ~~~~id~li~~ag~   89 (255)
T PRK06463         76 EFGRVDVLVNNAGI   89 (255)
T ss_pred             HcCCCCEEEECCCc
Confidence               26888888743

>PRK12742 oxidoreductase; Provisional

Probab=99.13  E-value=5.6e-10  Score=86.62  Aligned_cols=78  Identities=22%  Similarity=0.273  Sum_probs=56.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc--c
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK--Y  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~--~  151 (167)
                      .+++|+++||||++|||++++++|+++|++|++.++ +.+..++..    ...+   +.++.+|++|.+.  ....+  .
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~~---~~~~~~D~~~~~~~~~~~~~~~~   75 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA----QETG---ATAVQTDSADRDAVIDVVRKSGA   75 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHH----HHhC---CeEEecCCCCHHHHHHHHHHhCC
Confidence            478999999999999999999999999999988766 444443332    2222   4567899998762  22222  2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||++-.
T Consensus        76 id~li~~ag~   85 (237)
T PRK12742         76 LDILVVNAGI   85 (237)
T ss_pred             CcEEEECCCC
Confidence            6888888743

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.13  E-value=5.8e-10  Score=89.00  Aligned_cols=83  Identities=23%  Similarity=0.263  Sum_probs=64.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~----  150 (167)
                      ..++|+++||||++|||++++++|+++|++|++.+|+.+..++...++... +. ++.++.+|+++.+.  ..+..    
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GG-EAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999887776665555443 33 58889999999872  22221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||++..
T Consensus        85 ~~~id~vi~~Ag~   97 (274)
T PRK07775         85 LGEIEVLVSGAGD   97 (274)
T ss_pred             cCCCCEEEECCCc
Confidence              26888888843

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.12  E-value=4.1e-10  Score=90.02  Aligned_cols=74  Identities=22%  Similarity=0.169  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhh-------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIY-------  149 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~-------  149 (167)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.++++    ...    .+.++.+|++|.+ . ..+.       
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~~----~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EAE----GLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHC----CceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998766433    221    3677899999976 2 1111       


Q ss_pred             ccceEEEEecc
Q 031009          150 KYSWLLVNIYV  160 (167)
Q Consensus       150 ~~~dilvN~ai  160 (167)
                      ..+|++||||-
T Consensus        75 g~id~li~~Ag   85 (277)
T PRK05993         75 GRLDALFNNGA   85 (277)
T ss_pred             CCccEEEECCC
Confidence            13689999874

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.11  E-value=6.6e-10  Score=87.67  Aligned_cols=80  Identities=30%  Similarity=0.399  Sum_probs=63.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc-------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK-------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~-------~  151 (167)
                      +|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... +. ++.++.+|++|.+. ..+..       .
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GG-EALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999988877776666553 33 68889999999762 22111       2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||++..
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            6899998754

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.11  E-value=4e-10  Score=88.76  Aligned_cols=74  Identities=31%  Similarity=0.302  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh-----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY-----  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~-----  149 (167)
                      ..++||+++|||+++|||++++++|+++|++|++++|+.+..      .    +. ++.++++|++|.+. ..+.     
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~----~~-~~~~~~~D~~~~~~~~~~~~~~~~   73 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L----PE-GVEFVAADLTTAEGCAAVARAVLE   73 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c----CC-ceeEEecCCCCHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999986421      1    22 57889999999762 2111     


Q ss_pred             --ccceEEEEecc
Q 031009          150 --KYSWLLVNIYV  160 (167)
Q Consensus       150 --~~~dilvN~ai  160 (167)
                        ..+|++||++-
T Consensus        74 ~~~~id~vi~~ag   86 (260)
T PRK06523         74 RLGGVDILVHVLG   86 (260)
T ss_pred             HcCCCCEEEECCc
Confidence              12688998874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.11  E-value=3.4e-10  Score=88.06  Aligned_cols=74  Identities=24%  Similarity=0.271  Sum_probs=55.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~------~  151 (167)
                      +|+++|||+++|||++++++|+++|++|++.+|+++...   +++...    .+.++.+|++|.+.  ..+..      .
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            578999999999999999999999999999999876432   333222    25678999998762  11111      2


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|++|||+-
T Consensus        75 id~lv~~ag   83 (236)
T PRK06483         75 LRAIIHNAS   83 (236)
T ss_pred             ccEEEECCc
Confidence            788888874

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.11  E-value=2.1e-10  Score=86.17  Aligned_cols=78  Identities=26%  Similarity=0.248  Sum_probs=65.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhcc--c
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYKY--S  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~~--~  152 (167)
                      ++.|+.+++||++.|||++++++|++.|++|+.+.|+++.++.+++|-    +. .+..+++|+++++  .+.....  +
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~-~I~Pi~~Dls~wea~~~~l~~v~pi   78 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PS-LIIPIVGDLSAWEALFKLLVPVFPI   78 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----Cc-ceeeeEecccHHHHHHHhhcccCch
Confidence            688999999999999999999999999999999999999888776653    22 4888999999976  3333333  7


Q ss_pred             eEEEEec
Q 031009          153 WLLVNIY  159 (167)
Q Consensus       153 dilvN~a  159 (167)
                      |.+||||
T Consensus        79 dgLVNNA   85 (245)
T KOG1207|consen   79 DGLVNNA   85 (245)
T ss_pred             hhhhccc
Confidence            8999987

>TIGR02415 23BDH acetoin reductases

Probab=99.11  E-value=7.7e-10  Score=86.66  Aligned_cols=79  Identities=19%  Similarity=0.184  Sum_probs=63.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~  152 (167)
                      |+++|||+++|||++++++|+++|++|++++|+.+..++..+++... +. ++.++.+|++|.+. .. +..      ..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GG-KAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988777776776543 33 68899999999772 22 221      26


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||++-.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            889998854

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.11  E-value=8e-10  Score=87.06  Aligned_cols=82  Identities=18%  Similarity=0.196  Sum_probs=59.3

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCC-----------hhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        77 ~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      .+++|+++|||+++  |||.+++++|+++|++|++.+|+           .........++... +. ++.++++|+++.
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY-GV-RCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc-CC-eEEEEECCCCCH
Confidence            46789999999995  99999999999999999999987           22222233444322 33 688999999997


Q ss_pred             hh--hhhhc------cceEEEEecc
Q 031009          144 PY--NIIYK------YSWLLVNIYV  160 (167)
Q Consensus       144 ~~--~~~~~------~~dilvN~ai  160 (167)
                      +.  ..+.+      .+|++||++.
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag  104 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAA  104 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCC
Confidence            62  21211      2688899874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.10  E-value=3.7e-10  Score=87.33  Aligned_cols=81  Identities=32%  Similarity=0.333  Sum_probs=61.8

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc-----
Q 031009           79 PPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY-----  151 (167)
Q Consensus        79 ~gk~vlITGas-~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~-----  151 (167)
                      ..|+++|||++ ||||.+++++|.++|+.|+.+.|+.+....+.    .+.   .+...++||++++ ...+..+     
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~----~~~---gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA----IQF---GLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH----Hhh---CCeeEEeccCChHHHHHHHHHHhhCC
Confidence            35678888876 78999999999999999999999987665432    222   3788999999987 2222211     


Q ss_pred             ---ceEEEEeccCcccCC
Q 031009          152 ---SWLLVNIYVPSCFIG  166 (167)
Q Consensus       152 ---~dilvN~ai~~~~~~  166 (167)
                         +|+|+|||-..|..+
T Consensus        79 ~Gkld~L~NNAG~~C~~P   96 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFP   96 (289)
T ss_pred             CCceEEEEcCCCCCcccc
Confidence               899999998877654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.10  E-value=6.5e-10  Score=87.05  Aligned_cols=85  Identities=21%  Similarity=0.316  Sum_probs=60.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH--HHHHHHHHHHHhCCceEEEEeccCCC-hh-hhhhh---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWVPPSRLVS-AP-YNIIY---  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~d-~~-~~~~~---  149 (167)
                      ++.+|+++|||+++|||+++++.|+++|++|++..+..+.  .++..+... ..+...+.+..+|+++ .+ .+.+.   
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999998888877654  333333332 1110257888899998 54 22111   


Q ss_pred             -cc---ceEEEEeccCc
Q 031009          150 -KY---SWLLVNIYVPS  162 (167)
Q Consensus       150 -~~---~dilvN~ai~~  162 (167)
                       ..   .|++||||-..
T Consensus        81 ~~~~g~id~lvnnAg~~   97 (251)
T COG1028          81 EEEFGRIDILVNNAGIA   97 (251)
T ss_pred             HHHcCCCCEEEECCCCC
Confidence             11   66999998654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.10  E-value=5e-10  Score=87.58  Aligned_cols=74  Identities=27%  Similarity=0.377  Sum_probs=55.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc---cceEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK---YSWLL  155 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~---~~dil  155 (167)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+    . .. ++.++++|++|.+ .. ...+   ..|++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~d~~   75 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----Q-SA-NIFTLAFDVTDHPGTKAALSQLPFIPELW   75 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----h-cC-CCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence            689999999999999999999999999999999876554322    2 22 4788999999987 22 2222   14566


Q ss_pred             EEecc
Q 031009          156 VNIYV  160 (167)
Q Consensus       156 vN~ai  160 (167)
                      +||+-
T Consensus        76 i~~ag   80 (240)
T PRK06101         76 IFNAG   80 (240)
T ss_pred             EEcCc
Confidence            66663

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.10  E-value=3.4e-10  Score=89.72  Aligned_cols=75  Identities=24%  Similarity=0.191  Sum_probs=58.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-----  150 (167)
                      .++|+++||||+||||++++++|+++|++|++.+|+.+..+.         . ..+.++++|++|.+ .+. +..     
T Consensus         2 ~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~-~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          2 SNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------I-PGVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------c-CCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999998754321         1 14788999999976 222 222     


Q ss_pred             -cceEEEEeccCc
Q 031009          151 -YSWLLVNIYVPS  162 (167)
Q Consensus       151 -~~dilvN~ai~~  162 (167)
                       ..|++|||+-..
T Consensus        72 g~~d~li~~ag~~   84 (270)
T PRK06179         72 GRIDVLVNNAGVG   84 (270)
T ss_pred             CCCCEEEECCCCC
Confidence             268999988654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.09  E-value=4e-10  Score=95.40  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=60.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      .++||+++||||++|||++++++|+++|++|++++|+.+++++.   +... .. .+..+.+|++|.+ ........|++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~-~~-~v~~v~~Dvsd~~~v~~~l~~IDiL  249 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE-DL-PVKTLHWQVGQEAALAELLEKVDIL  249 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc-CC-CeEEEEeeCCCHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999999987655432   2111 11 4667889999976 33333457888


Q ss_pred             EEecc
Q 031009          156 VNIYV  160 (167)
Q Consensus       156 vN~ai  160 (167)
                      ||||-
T Consensus       250 InnAG  254 (406)
T PRK07424        250 IINHG  254 (406)
T ss_pred             EECCC
Confidence            88763

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.09  E-value=6.1e-10  Score=87.60  Aligned_cols=84  Identities=25%  Similarity=0.270  Sum_probs=63.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~--  150 (167)
                      +.++++|+++||||++|||+.++++|+++|++|++++|+.+..++..+++.    ..++.++.+|++|++. .. +.+  
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999998876655444332    2157889999999772 22 221  


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          ..|++||++-..
T Consensus        82 ~~~~~~d~vi~~ag~~   97 (264)
T PRK12829         82 ERFGGLDVLVNNAGIA   97 (264)
T ss_pred             HHhCCCCEEEECCCCC
Confidence                268888887543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.08  E-value=6.5e-10  Score=86.37  Aligned_cols=77  Identities=25%  Similarity=0.273  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~---  150 (167)
                      +.+.+|+++||||++|||++++++|+++|+ +|++++|+.++.++        .+. ++.++.+|++|.+. ....+   
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~-~~~~~~~D~~~~~~~~~~~~~~~   72 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGP-RVVPLQLDVTDPASVAAAAEAAS   72 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCC-ceEEEEecCCCHHHHHHHHHhcC
Confidence            457889999999999999999999999998 99999998765443        223 68889999999762 22222   


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||++..
T Consensus        73 ~id~vi~~ag~   83 (238)
T PRK08264         73 DVTILVNNAGI   83 (238)
T ss_pred             CCCEEEECCCc
Confidence            26888888754

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.08  E-value=6e-10  Score=90.75  Aligned_cols=83  Identities=13%  Similarity=0.087  Sum_probs=61.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVN  157 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN  157 (167)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..++....+.......++.++.+|++|.+ ...+.+..|++||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            478999999999999999999999999999998887654433222211111125888999999976 3444445789999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      +|-.
T Consensus        84 ~A~~   87 (325)
T PLN02989         84 TASP   87 (325)
T ss_pred             eCCC
Confidence            8854

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.07  E-value=3.7e-10  Score=89.37  Aligned_cols=74  Identities=27%  Similarity=0.266  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      ..+++|+++|||+++|||++++++|+++|++|++.+++.+..+          . .++.++++|++|.+ .+. +..   
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~-~~~~~~~~D~~~~~~~~~~~~~~~~   73 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------H-ENYQFVPTDVSSAEEVNHTVAEIIE   73 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------c-CceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999998875432          1 15778999999976 222 211   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||+|-
T Consensus        74 ~~g~id~li~~Ag   86 (266)
T PRK06171         74 KFGRIDGLVNNAG   86 (266)
T ss_pred             HcCCCCEEEECCc
Confidence               2688999885

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.07  E-value=1.3e-09  Score=84.77  Aligned_cols=80  Identities=21%  Similarity=0.128  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---c
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---Y  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---~  151 (167)
                      +.+++|+++|||+++|||+.+++.|+++|++|++++|+.++.++..+++       ...++.+|+++.+ .....+   .
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~   77 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAAAGA   77 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHHhCC
Confidence            3578899999999999999999999999999999999887655433221       2456789999876 222222   2


Q ss_pred             ceEEEEeccCc
Q 031009          152 SWLLVNIYVPS  162 (167)
Q Consensus       152 ~dilvN~ai~~  162 (167)
                      .|++||++...
T Consensus        78 ~d~vi~~ag~~   88 (245)
T PRK07060         78 FDGLVNCAGIA   88 (245)
T ss_pred             CCEEEECCCCC
Confidence            68889888543

>PLN00015 protochlorophyllide reductase

Probab=99.07  E-value=3.9e-10  Score=91.73  Aligned_cols=75  Identities=24%  Similarity=0.237  Sum_probs=58.7

Q ss_pred             EEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh-------ccceE
Q 031009           84 LITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY-------KYSWL  154 (167)
Q Consensus        84 lITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~-------~~~di  154 (167)
                      +||||++|||++++++|+++| ++|++.+|+.+..++..+++... +. ++.++++|++|.+. +.+.       ..+|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KD-SYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CC-eEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            599999999999999999999 99999999988877776666422 22 57889999999762 2211       12789


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      +||||-
T Consensus        79 lInnAG   84 (308)
T PLN00015         79 LVCNAA   84 (308)
T ss_pred             EEECCC
Confidence            999884

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.07  E-value=1.2e-09  Score=87.06  Aligned_cols=78  Identities=18%  Similarity=0.217  Sum_probs=60.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK------  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~------  150 (167)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. .+.++++|++|.+.  ..+..      
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GD-RLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cC-CeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999987765543322    22 57788999999762  21221      


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||++-.
T Consensus        77 ~~d~vi~~ag~   87 (275)
T PRK08263         77 RLDIVVNNAGY   87 (275)
T ss_pred             CCCEEEECCCC
Confidence            26888888754

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.07  E-value=1e-09  Score=86.29  Aligned_cols=78  Identities=27%  Similarity=0.294  Sum_probs=61.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~------~  151 (167)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.   + .++.++++|+.|.+.  ..+..      .
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---D-ARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---C-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999887766655552   2 258889999999872  22222      2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||++..
T Consensus        78 ~d~vi~~ag~   87 (257)
T PRK07074         78 VDVLVANAGA   87 (257)
T ss_pred             CCEEEECCCC
Confidence            6888888743

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.8e-09  Score=84.00  Aligned_cols=83  Identities=22%  Similarity=0.217  Sum_probs=60.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC----hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hh-
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IY-  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~-  149 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|.    .+..++...++... +. ++.++.+|++|.+ ... +. 
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-GG-KALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999997653    33444444444332 33 6889999999976 222 21 


Q ss_pred             -----ccceEEEEeccC
Q 031009          150 -----KYSWLLVNIYVP  161 (167)
Q Consensus       150 -----~~~dilvN~ai~  161 (167)
                           ...|.+||++..
T Consensus        81 ~~~~~~~~d~vi~~ag~   97 (249)
T PRK12827         81 GVEEFGRLDILVNNAGI   97 (249)
T ss_pred             HHHHhCCCCEEEECCCC
Confidence                 126888888754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.06  E-value=1.9e-09  Score=84.28  Aligned_cols=83  Identities=24%  Similarity=0.274  Sum_probs=60.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~--  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++..++ .+...+....+... +. ++.++.+|+++.+. .. ...  
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GG-EGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CC-eeEEEEeccCCHHHHHHHHHHHH
Confidence            45778999999999999999999999999998887654 34444444444433 33 57788999998762 22 221  


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          ..|++||++-
T Consensus        80 ~~~~~~d~vi~~ag   93 (252)
T PRK06077         80 DRYGVADILVNNAG   93 (252)
T ss_pred             HHcCCCCEEEECCC
Confidence                2688888874

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.06  E-value=1.5e-09  Score=84.16  Aligned_cols=65  Identities=29%  Similarity=0.404  Sum_probs=54.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .+++|+++|||+++|||.++++.|+++|++|++.+|+++..++..+++... +  ++.++++|+++.+
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~Dl~~~~   66 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-G--NIHYVVGDVSSTE   66 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C--CeEEEECCCCCHH
Confidence            467899999999999999999999999999999999988776655555332 2  4788999999876

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.4e-09  Score=84.88  Aligned_cols=80  Identities=21%  Similarity=0.182  Sum_probs=58.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc------
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK------  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~------  150 (167)
                      +|+++|||+++|||.+++++|+++|++|++.++ +++..++...++... +. ++.++++|++|.+ ... +..      
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-GG-EALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-CC-cEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999888874 445555555555433 33 5788999999976 222 221      


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      .+|++||++-.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06123         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCCC
Confidence            26889998854

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.05  E-value=1.4e-09  Score=85.00  Aligned_cols=79  Identities=24%  Similarity=0.249  Sum_probs=61.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-h---h---cc
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-I---Y---KY  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~---~---~~  151 (167)
                      +|+++|||++++||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|++|.+ ... +   .   ..
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-GG-SVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999988777766666443 33 6889999999976 211 1   1   12


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|++++++.
T Consensus        79 ~d~vi~~a~   87 (255)
T TIGR01963        79 LDILVNNAG   87 (255)
T ss_pred             CCEEEECCC
Confidence            678888774

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07069 short chain dehydrogenase; Validated

Probab=99.05  E-value=1.6e-09  Score=84.64  Aligned_cols=79  Identities=20%  Similarity=0.299  Sum_probs=59.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cce
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YSW  153 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~d  153 (167)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+++....+...+..+++|++|.+. .. +..      ..|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 66666666666544333245678899999762 21 111      268


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||++-.
T Consensus        82 ~vi~~ag~   89 (251)
T PRK07069         82 VLVNNAGV   89 (251)
T ss_pred             EEEECCCc
Confidence            99998854

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.05  E-value=9.1e-10  Score=85.58  Aligned_cols=72  Identities=19%  Similarity=0.246  Sum_probs=56.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----cceEEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----YSWLLV  156 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----~~dilv  156 (167)
                      +++||||++|||+++++.|+++|++|++.+|+.+++++..+++       .+.++++|++|.+ ...+.+    ..|++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~~id~lv   74 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPHHLDTIV   74 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhhcCcEEE
Confidence            4899999999999999999999999999999987776554443       2457889999976 222221    378999


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      ||+-
T Consensus        75 ~~ag   78 (223)
T PRK05884         75 NVPA   78 (223)
T ss_pred             ECCC
Confidence            9874

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.05  E-value=1.8e-09  Score=84.73  Aligned_cols=79  Identities=27%  Similarity=0.302  Sum_probs=58.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY------K  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~------~  150 (167)
                      .|+++|||+++|||.+++++|+++|++|++++|+. +..++..++++.. +. ++.++.+|+++.+. .. ..      .
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-GV-EVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999864 3444444444332 22 58889999999762 21 11      1


Q ss_pred             cceEEEEecc
Q 031009          151 YSWLLVNIYV  160 (167)
Q Consensus       151 ~~dilvN~ai  160 (167)
                      ..|++||++-
T Consensus        80 ~id~vi~~ag   89 (256)
T PRK12745         80 RIDCLVNNAG   89 (256)
T ss_pred             CCCEEEECCc
Confidence            2688888873

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.05  E-value=2.1e-09  Score=83.32  Aligned_cols=82  Identities=23%  Similarity=0.315  Sum_probs=59.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hh----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IY----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~----  149 (167)
                      .+++|+++||||+++||++++++|+++|++|++..++.+. .+....++... +. ++.++.+|++|.+ ... +.    
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GR-RAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CC-ceEEEECCcCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999998886665543 33343444332 33 5888999999876 222 21    


Q ss_pred             --ccceEEEEecc
Q 031009          150 --KYSWLLVNIYV  160 (167)
Q Consensus       150 --~~~dilvN~ai  160 (167)
                        ...|+++|++.
T Consensus        81 ~~~~id~vi~~ag   93 (249)
T PRK12825         81 RFGRIDILVNNAG   93 (249)
T ss_pred             HcCCCCEEEECCc
Confidence              12688888875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.05  E-value=1.6e-09  Score=84.64  Aligned_cols=80  Identities=26%  Similarity=0.203  Sum_probs=60.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhh------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIY------K  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~------~  150 (167)
                      .|+++||||++|||.++++.|+++|++|+++. |+++..++...++... +. ++.++++|+++.+.  ..+.      .
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-GG-RACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CC-cEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999988765 5666666666666443 33 68899999998762  2111      1


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||++-.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06947         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCcc
Confidence            27888888753

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.04  E-value=8.9e-10  Score=90.35  Aligned_cols=80  Identities=18%  Similarity=0.129  Sum_probs=60.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~di  154 (167)
                      ++||+++||||+|+||++++++|+++|  ++|++++|+.....+...++    ...++.++.+|++|.+ ...+.+..|+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~~iD~   77 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALRGVDY   77 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence            578999999999999999999999986  78999998865543332222    2225888999999987 3444455789


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      ++|+|-.
T Consensus        78 Vih~Ag~   84 (324)
T TIGR03589        78 VVHAAAL   84 (324)
T ss_pred             EEECccc
Confidence            9998754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.04  E-value=2.6e-09  Score=82.80  Aligned_cols=83  Identities=25%  Similarity=0.277  Sum_probs=61.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      ++++|+++|||+++|||+++++.|+++|++|+++.|+.+. .++...++... +. ++.++.+|+++.+. .. +.+   
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-GG-KALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999888876543 44444555433 33 68889999999762 22 221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|+++|++..
T Consensus        80 ~~~~id~vi~~ag~   93 (248)
T PRK05557         80 EFGGVDILVNNAGI   93 (248)
T ss_pred             HcCCCCEEEECCCc
Confidence               26888888743

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.03  E-value=2.2e-09  Score=83.26  Aligned_cols=78  Identities=24%  Similarity=0.192  Sum_probs=58.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hh------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IY------KY  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~------~~  151 (167)
                      |+++|||+++|||++++++|+++|++|+++.| +.+..++...++... +. ++.++.+|++|.+. .. +.      ..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-GF-DFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-CC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999888 555555554544333 22 58889999999762 22 11      12


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|+++|++-
T Consensus        79 id~vi~~ag   87 (242)
T TIGR01829        79 IDVLVNNAG   87 (242)
T ss_pred             CcEEEECCC
Confidence            688888874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.4e-09  Score=86.51  Aligned_cols=74  Identities=28%  Similarity=0.206  Sum_probs=56.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hh------ccc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IY------KYS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~------~~~  152 (167)
                      |+++||||++|||++++++|+++|++|++++|+.+..++.    ...    .+.++.+|+++.+ ... +.      ...
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AAA----GFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHC----CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999987665432    221    3567889999976 222 11      127


Q ss_pred             eEEEEeccCc
Q 031009          153 WLLVNIYVPS  162 (167)
Q Consensus       153 dilvN~ai~~  162 (167)
                      |++||++-..
T Consensus        74 d~vi~~ag~~   83 (274)
T PRK05693         74 DVLINNAGYG   83 (274)
T ss_pred             CEEEECCCCC
Confidence            8999988543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.03  E-value=1.8e-09  Score=84.02  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=60.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc------c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK------Y  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~------~  151 (167)
                      |+++||||++|||++++++|+++|++|++ ..|+.+..++...++... +. ++.++++|++|.+ .+. +..      .
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-GG-KAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-CC-eEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999887 467777666666666543 33 5788999999986 222 221      1


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||++-.
T Consensus        80 id~vi~~ag~   89 (247)
T PRK09730         80 LAALVNNAGI   89 (247)
T ss_pred             CCEEEECCCC
Confidence            6788888753

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.03  E-value=2e-09  Score=84.47  Aligned_cols=75  Identities=25%  Similarity=0.410  Sum_probs=58.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~  152 (167)
                      ++++|||+++|||.++++.|+++|++|++++|+++.+++...++    +. ++.++.+|++|.+. .. +..      ..
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GD-NLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cc-ceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36999999999999999999999999999999987766554433    32 58889999999762 22 211      37


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |++||++.
T Consensus        76 d~vi~~ag   83 (248)
T PRK10538         76 DVLVNNAG   83 (248)
T ss_pred             CEEEECCC
Confidence            88888874

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.02  E-value=1.9e-09  Score=85.85  Aligned_cols=77  Identities=19%  Similarity=0.343  Sum_probs=58.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~------~  151 (167)
                      .|+++||||++|||++++++|+++|++|++++|+++..++..+++    +. ++.++++|++|.+.  ..+.+      .
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----GD-RLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999987665443322    33 58889999999762  22211      2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||++-.
T Consensus        77 id~vi~~ag~   86 (276)
T PRK06482         77 IDVVVSNAGY   86 (276)
T ss_pred             CCEEEECCCC
Confidence            6899998743

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.02  E-value=2.1e-09  Score=87.49  Aligned_cols=84  Identities=14%  Similarity=0.055  Sum_probs=62.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      .+||+++||||+|+||.+++++|+++|++|+++.|+.+..+.............++.++.+|++|.+ ...+.+..|+++
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            5688999999999999999999999999999998887654433222211111225788999999876 344445578999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|-+
T Consensus        83 h~A~~   87 (322)
T PLN02986         83 HTASP   87 (322)
T ss_pred             EeCCC
Confidence            99864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=98.99  E-value=3e-09  Score=87.08  Aligned_cols=84  Identities=18%  Similarity=0.164  Sum_probs=68.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH--HHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA--VQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      .+++++||||+|.||..++++|+++||+|..+.|+++..+..  +.+++.  ...+...+..|+.|.. ...+.+..|.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~--a~~~l~l~~aDL~d~~sf~~ai~gcdgV   82 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG--AKERLKLFKADLLDEGSFDKAIDGCDGV   82 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc--CcccceEEeccccccchHHHHHhCCCEE
Confidence            678999999999999999999999999999999999875442  333432  2335899999999987 66677779999


Q ss_pred             EEeccCccc
Q 031009          156 VNIYVPSCF  164 (167)
Q Consensus       156 vN~ai~~~~  164 (167)
                      +|.|.|-.|
T Consensus        83 fH~Asp~~~   91 (327)
T KOG1502|consen   83 FHTASPVDF   91 (327)
T ss_pred             EEeCccCCC
Confidence            999987655

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.99  E-value=3.8e-09  Score=82.66  Aligned_cols=75  Identities=27%  Similarity=0.257  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~---  150 (167)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.         +... +. ++.++++|+++.+ ..... .   
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE-DY-PFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc-CC-ceEEEEecCCCHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999975         1111 22 5888999999976 22222 1   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|+++|++-.
T Consensus        73 ~~~~id~vi~~ag~   86 (252)
T PRK08220         73 ETGPLDVLVNAAGI   86 (252)
T ss_pred             HcCCCCEEEECCCc
Confidence               16889998754

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.98  E-value=2e-09  Score=80.96  Aligned_cols=78  Identities=24%  Similarity=0.295  Sum_probs=64.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh-hhh-----c
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN-IIY-----K  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~-~~~-----~  150 (167)
                      +.+|-+.+||||.+|+|++.+++|+++|+.|++.|....+..+..+|+    +. ++.|...|++++.+. .+.     +
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~-~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GG-KVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CC-ceEEeccccCcHHHHHHHHHHHHhh
Confidence            467889999999999999999999999999999999888887777766    44 699999999987622 211     1


Q ss_pred             c--ceEEEEec
Q 031009          151 Y--SWLLVNIY  159 (167)
Q Consensus       151 ~--~dilvN~a  159 (167)
                      +  .|++||+|
T Consensus        81 fgrld~~vnca   91 (260)
T KOG1199|consen   81 FGRLDALVNCA   91 (260)
T ss_pred             ccceeeeeecc
Confidence            1  89999987

>PRK08324 short chain dehydrogenase; Validated

Probab=98.97  E-value=3.5e-09  Score=94.93  Aligned_cols=81  Identities=20%  Similarity=0.190  Sum_probs=65.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~----  150 (167)
                      .++||+++||||+||||+++++.|+++|++|++++|+.+.+++...++...   .++.++.+|++|.+. .. +..    
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998877766666433   258889999999762 22 221    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        ..|++||++-
T Consensus       496 ~g~iDvvI~~AG  507 (681)
T PRK08324        496 FGGVDIVVSNAG  507 (681)
T ss_pred             cCCCCEEEECCC
Confidence              2688888874

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.96  E-value=2.9e-09  Score=92.10  Aligned_cols=86  Identities=22%  Similarity=0.245  Sum_probs=74.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY-  151 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~-  151 (167)
                      +.++.||+++||||+|.||.++++++++.+ .+++++++++-++.....++....+..++.++-+||.|.+ ...+... 
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            347999999999999999999999999999 6699999999999999999988767668999999999988 4445544 


Q ss_pred             -ceEEEEecc
Q 031009          152 -SWLLVNIYV  160 (167)
Q Consensus       152 -~dilvN~ai  160 (167)
                       .|++.|+|.
T Consensus       325 kvd~VfHAAA  334 (588)
T COG1086         325 KVDIVFHAAA  334 (588)
T ss_pred             CCceEEEhhh
Confidence             899999883

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.96  E-value=3.4e-09  Score=85.94  Aligned_cols=82  Identities=16%  Similarity=0.125  Sum_probs=60.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH-hCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      ++|+++||||+|+||+.++++|+++|++|++++|+.+..... ..+... ....++.++.+|++|.+ ...+.+..|+++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            468999999999999999999999999999999876543322 122111 11125788999999876 444445578999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|.+
T Consensus        82 h~A~~   86 (322)
T PLN02662         82 HTASP   86 (322)
T ss_pred             EeCCc
Confidence            98854

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.96  E-value=3.7e-09  Score=81.70  Aligned_cols=74  Identities=28%  Similarity=0.391  Sum_probs=57.9

Q ss_pred             EEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhcc--ceEEEEec
Q 031009           84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYKY--SWLLVNIY  159 (167)
Q Consensus        84 lITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~~--~dilvN~a  159 (167)
                      +|||+++|||++++++|+++|++|++++|+.+..++..++++.  +. .+.++.+|++|.+ ... +...  +|++||++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GA-PVRTAALDITDEAAVDAFFAEAGPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CC-ceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence            5999999999999999999999999999998777666555542  22 5788999999987 222 2222  68888887


Q ss_pred             c
Q 031009          160 V  160 (167)
Q Consensus       160 i  160 (167)
                      .
T Consensus        78 g   78 (230)
T PRK07041         78 A   78 (230)
T ss_pred             C
Confidence            4

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.96  E-value=7e-09  Score=88.71  Aligned_cols=85  Identities=16%  Similarity=0.158  Sum_probs=59.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh---H----H---------HHHHHHHHHHhCCceEEEEecc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---R----V---------DSAVQSLREEFGEQHVWVPPSR  139 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~~D  139 (167)
                      ..+++|+++||||+|+||++++++|+++|++|+++|+...   .    .         .+.++.+....+. ++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGK-EIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCC-cceEEECC
Confidence            3678899999999999999999999999999999875321   0    0         0111112111122 58889999


Q ss_pred             CCChh-hhhhhc--cceEEEEeccC
Q 031009          140 LVSAP-YNIIYK--YSWLLVNIYVP  161 (167)
Q Consensus       140 v~d~~-~~~~~~--~~dilvN~ai~  161 (167)
                      ++|.+ ...+.+  ..|+++|+|..
T Consensus       122 l~d~~~v~~~l~~~~~D~ViHlAa~  146 (442)
T PLN02572        122 ICDFEFLSEAFKSFEPDAVVHFGEQ  146 (442)
T ss_pred             CCCHHHHHHHHHhCCCCEEEECCCc
Confidence            99976 333333  27999998844

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.95  E-value=2.4e-09  Score=83.04  Aligned_cols=73  Identities=25%  Similarity=0.234  Sum_probs=56.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhh--ccceE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIY--KYSWL  154 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~--~~~di  154 (167)
                      ++++|+++|||+++|||++++++|+++|++|++++|+....      .    . .++.++.+|++++......  ...|+
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~-~~~~~~~~D~~~~~~~~~~~~~~id~   70 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L----S-GNFHFLQLDLSDDLEPLFDWVPSVDI   70 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c----C-CcEEEEECChHHHHHHHHHhhCCCCE
Confidence            47889999999999999999999999999999999875321      1    1 2578899999987211111  23788


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      +||++-
T Consensus        71 lv~~ag   76 (235)
T PRK06550         71 LCNTAG   76 (235)
T ss_pred             EEECCC
Confidence            888874

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.94  E-value=4.8e-09  Score=86.55  Aligned_cols=80  Identities=16%  Similarity=0.061  Sum_probs=59.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~di  154 (167)
                      ++||+++||||+|+||.++++.|+++|++|++++|+..........+..  +. ++.++.+|++|.+ ...+.+  ..|+
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--AK-KIEDHFGDIRDAAKLRKAIAEFKPEI   78 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--cC-CceEEEccCCCHHHHHHHHhhcCCCE
Confidence            5689999999999999999999999999999999987654333333321  22 4677899999976 223322  2688


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      +||+|.
T Consensus        79 vih~A~   84 (349)
T TIGR02622        79 VFHLAA   84 (349)
T ss_pred             EEECCc
Confidence            999885

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.93  E-value=8e-09  Score=80.26  Aligned_cols=78  Identities=23%  Similarity=0.209  Sum_probs=56.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc------c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK------Y  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~------~  151 (167)
                      |+++|||+++|||+++++.|+++|++|++++|+.+ ..++...++.. .+ .++.++.+|++|.+ ... +..      .
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-TE-DQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-cC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999854 22222222211 12 26888999999976 222 211      2


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|++||++-
T Consensus        81 id~vi~~ag   89 (245)
T PRK12824         81 VDILVNNAG   89 (245)
T ss_pred             CCEEEECCC
Confidence            788888874

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.93  E-value=5.9e-09  Score=81.02  Aligned_cols=76  Identities=20%  Similarity=0.267  Sum_probs=56.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cce
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YSW  153 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~d  153 (167)
                      ++|||+++|||++++++|+++|++|++++|. .+..++..++++.. +. ++.++++|++|.+. .. +..      .+|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-GG-NARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999998865 45556666666544 33 68899999999862 22 211      157


Q ss_pred             EEEEecc
Q 031009          154 LLVNIYV  160 (167)
Q Consensus       154 ilvN~ai  160 (167)
                      +++||+-
T Consensus        79 ~li~~ag   85 (239)
T TIGR01831        79 GVVLNAG   85 (239)
T ss_pred             EEEECCC
Confidence            7777763

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.92  E-value=7.4e-09  Score=85.56  Aligned_cols=81  Identities=19%  Similarity=0.147  Sum_probs=61.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      -.+++++||||+|+||..++++|+++|++|++++|+.+..+....++..  + .++.++.+|+++.+ ...+....|++|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--G-DRLRLFRADLQEEGSFDEAVKGCDGVF   84 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--C-CeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence            3566899999999999999999999999999999987655544333321  2 26888999999976 333334578999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|..
T Consensus        85 h~A~~   89 (353)
T PLN02896         85 HVAAS   89 (353)
T ss_pred             ECCcc
Confidence            98854

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.91  E-value=4.8e-09  Score=81.19  Aligned_cols=72  Identities=21%  Similarity=0.274  Sum_probs=54.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----cceE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----YSWL  154 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----~~di  154 (167)
                      |+++|||+++|||++++++|+++|++|++++|+.+..++. .++    +  ++.+..+|++|.+ ...+.+     ..|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~----~--~~~~~~~D~~d~~~~~~~~~~~~~~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL----P--GVHIEKLDMNDPASLDQLLQRLQGQRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc----c--ccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence            6899999999999999999999999999999987765432 211    1  4667889999976 222222     2677


Q ss_pred             EEEec
Q 031009          155 LVNIY  159 (167)
Q Consensus       155 lvN~a  159 (167)
                      ++|++
T Consensus        75 vi~~a   79 (225)
T PRK08177         75 LFVNA   79 (225)
T ss_pred             EEEcC
Confidence            77776

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.91  E-value=1.3e-08  Score=85.74  Aligned_cols=84  Identities=18%  Similarity=0.180  Sum_probs=60.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH--HHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ..+.++++++||||+|+||+.++++|+++|++|++++|+....+.  ...++... .. .+.++.+|++|.+ .....+ 
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~-~v~~v~~Dl~d~~~l~~~~~~  132 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE-LP-GAEVVFGDVTDADSLRKVLFS  132 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh-cC-CceEEEeeCCCHHHHHHHHHH
Confidence            345678899999999999999999999999999999998754321  11122111 12 5788999999987 333322 


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|+++|++.
T Consensus       133 ~~~~~D~Vi~~aa  145 (390)
T PLN02657        133 EGDPVDVVVSCLA  145 (390)
T ss_pred             hCCCCcEEEECCc
Confidence               3788888754

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.91  E-value=6.5e-09  Score=81.37  Aligned_cols=59  Identities=29%  Similarity=0.498  Sum_probs=47.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      |+++||||++|||++++++|+++|++|++++|+. +.++    ++....+. ++.++++|+++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~-~~~~~~~D~~~~~   61 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELT----KLAEQYNS-NLTFHSLDLQDVH   61 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHH----HHHhccCC-ceEEEEecCCCHH
Confidence            6899999999999999999999999999999986 3332    22222233 5788999999876

>PRK07023 short chain dehydrogenase; Provisional

Probab=98.90  E-value=8.5e-09  Score=80.49  Aligned_cols=74  Identities=27%  Similarity=0.315  Sum_probs=54.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--------
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--------  150 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--------  150 (167)
                      ++++||||++|||++++++|+++|++|++++|+.+..      +....+. ++.++++|++|.+ ... +..        
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS------LAAAAGE-RLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh------hhhccCC-eEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            3699999999999999999999999999999986531      1112233 6888999999976 222 111        


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++|||+..
T Consensus        75 ~~~~~~~v~~ag~   87 (243)
T PRK07023         75 GASRVLLINNAGT   87 (243)
T ss_pred             CCCceEEEEcCcc
Confidence              25788888743

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.89  E-value=6.1e-09  Score=85.67  Aligned_cols=81  Identities=20%  Similarity=0.161  Sum_probs=56.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHh---CCceEEEEeccCCChh-hhhhhc-c-ce
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-SAVQSLREEF---GEQHVWVPPSRLVSAP-YNIIYK-Y-SW  153 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~---~~~~~~~~~~Dv~d~~-~~~~~~-~-~d  153 (167)
                      |+++||||+|+||.+++++|+++|++|++++|+.+... +....+....   ....+.++.+|++|.+ ...+.+ . .|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999998754211 1112221110   0125788999999976 333333 2 68


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      +++|+|..
T Consensus        81 ~ViH~Aa~   88 (343)
T TIGR01472        81 EIYNLAAQ   88 (343)
T ss_pred             EEEECCcc
Confidence            99998864

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02214 cinnamoyl-CoA reductase

Probab=98.89  E-value=1.4e-08  Score=83.83  Aligned_cols=82  Identities=16%  Similarity=0.123  Sum_probs=61.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH-HHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+..... ..++..  ...++.++.+|++|.+ ...+.+..|++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   85 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAIDGCDGV   85 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHhcCCEE
Confidence            5678999999999999999999999999999999986543221 122211  1125788899999876 34444557899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      +|+|-+
T Consensus        86 ih~A~~   91 (342)
T PLN02214         86 FHTASP   91 (342)
T ss_pred             EEecCC
Confidence            998854

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.88  E-value=5.7e-09  Score=85.66  Aligned_cols=85  Identities=18%  Similarity=0.086  Sum_probs=60.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHH--hCCceEEEEeccCCChh-hhhhhc--
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-SAVQSLREE--FGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~-~~~~~l~~~--~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+... ...+.+...  ....++.++.+|++|.+ ...+.+  
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            678899999999999999999999999999999998754211 111222110  01125788999999976 222232  


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||+|..
T Consensus        83 ~~d~Vih~A~~   93 (340)
T PLN02653         83 KPDEVYNLAAQ   93 (340)
T ss_pred             CCCEEEECCcc
Confidence            26899999864

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.88  E-value=3.4e-09  Score=86.41  Aligned_cols=39  Identities=23%  Similarity=0.409  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCC
Q 031009           75 EPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        75 ~~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      +..++||+++|||++  +|||+++|+.|+++|++|++.++.
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            457899999999996  999999999999999999998754

>PLN02650 dihydroflavonol-4-reductase

Probab=98.87  E-value=1.3e-08  Score=83.93  Aligned_cols=83  Identities=17%  Similarity=0.123  Sum_probs=60.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVN  157 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN  157 (167)
                      ..|+++||||+|+||.+++++|+++|++|++++|+.+..+.....+.......++.++.+|++|.+ ...+.+..|.++|
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            456899999999999999999999999999999987655443222211111125788999999876 3344445788999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      +|..
T Consensus        84 ~A~~   87 (351)
T PLN02650         84 VATP   87 (351)
T ss_pred             eCCC
Confidence            8854

>PLN02240 UDP-glucose 4-epimerase

Probab=98.87  E-value=1.7e-08  Score=82.96  Aligned_cols=85  Identities=16%  Similarity=0.192  Sum_probs=59.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC--CceEEEEeccCCChh-hhhhhc--c
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG--EQHVWVPPSRLVSAP-YNIIYK--Y  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~d~~-~~~~~~--~  151 (167)
                      ++++|+++||||+|+||.+++++|+++|++|++++|......+....+.....  ..++.++.+|++|.+ ...+.+  .
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            57789999999999999999999999999999998754322222222222111  125788999999977 222222  3


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|.++|+|..
T Consensus        82 ~d~vih~a~~   91 (352)
T PLN02240         82 FDAVIHFAGL   91 (352)
T ss_pred             CCEEEEcccc
Confidence            7889998753

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.87  E-value=1.2e-08  Score=83.66  Aligned_cols=83  Identities=17%  Similarity=0.113  Sum_probs=59.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      +.+|+++||||+|+||+.++++|+++|++|+++.|+.+...... .+.......++.++.+|++|.+ .....+..|+++
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            44788999999999999999999999999998888765432221 1111111114788999999976 344444579999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|.+
T Consensus        86 h~A~~   90 (338)
T PLN00198         86 HVATP   90 (338)
T ss_pred             EeCCC
Confidence            99864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.85  E-value=1.6e-08  Score=86.25  Aligned_cols=79  Identities=20%  Similarity=0.215  Sum_probs=56.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~-----  150 (167)
                      .+++|+++|||+++|||+++++.|+++|++|+++++.... + ...++....+   ..++.+|++|.+. ..+..     
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~-~l~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-E-ALAAVANRVG---GTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-H-HHHHHHHHcC---CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999985321 1 1122222222   3467899999762 22111     


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        ..|++||++-
T Consensus       282 ~g~id~vi~~AG  293 (450)
T PRK08261        282 HGGLDIVVHNAG  293 (450)
T ss_pred             CCCCCEEEECCC
Confidence              2689999874

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.84  E-value=1.8e-08  Score=81.71  Aligned_cols=84  Identities=24%  Similarity=0.271  Sum_probs=65.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY----  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~----  151 (167)
                      .+.+|.|+|||+-+|+|+.+|++|.++|..|+....+++..+.+..+..    ..+...++.||++++ .+.+.+.    
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~  101 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKH  101 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence            5778899999999999999999999999999999988777665555443    226778899999987 3333222    


Q ss_pred             -----ceEEEEec-cCccc
Q 031009          152 -----SWLLVNIY-VPSCF  164 (167)
Q Consensus       152 -----~dilvN~a-i~~~~  164 (167)
                           .+.+|||| |..++
T Consensus       102 l~~~gLwglVNNAGi~~~~  120 (322)
T KOG1610|consen  102 LGEDGLWGLVNNAGISGFL  120 (322)
T ss_pred             cccccceeEEecccccccc
Confidence                 89999999 45444

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.8e-08  Score=77.36  Aligned_cols=75  Identities=27%  Similarity=0.304  Sum_probs=57.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---cceEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---YSWLL  155 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---~~dil  155 (167)
                      +|+++||||+++||+++++.|+++ ++|++++|+.+..++..+++    .  .+.++++|++|.+ ...+..   ..|++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~id~v   75 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----P--GATPFPVDLTDPEAIAAAVEQLGRLDVL   75 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----c--cceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            578999999999999999999999 99999999876654432221    1  4778899999976 222222   37888


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||++..
T Consensus        76 i~~ag~   81 (227)
T PRK08219         76 VHNAGV   81 (227)
T ss_pred             EECCCc
Confidence            888743

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.83  E-value=1.9e-08  Score=84.34  Aligned_cols=82  Identities=20%  Similarity=0.164  Sum_probs=56.3

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHCCCeEEEEeCChhHHH------------HHHHHHHHHhCCceEEEEeccCCCh
Q 031009           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAERVD------------SAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        78 l~gk~vlITGas~GIG~a--ia~~L~~~G~~Vi~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      -.+|+++|||+++|||++  +++.| ++|++|+++++..+..+            ...++++ ..+. .+..+.+|+++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~-~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGL-YAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCC-ceEEEEcCCCCH
Confidence            347899999999999999  89999 99999888885432211            2223333 2243 567889999997


Q ss_pred             hh-h-hhhc------cceEEEEeccCc
Q 031009          144 PY-N-IIYK------YSWLLVNIYVPS  162 (167)
Q Consensus       144 ~~-~-~~~~------~~dilvN~ai~~  162 (167)
                      +. . .+..      .+|+|||++-..
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            62 1 1111      178999887443

>PLN02583 cinnamoyl-CoA reductase

Probab=98.82  E-value=2.9e-08  Score=80.32  Aligned_cols=81  Identities=15%  Similarity=0.102  Sum_probs=56.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH--HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~d  153 (167)
                      +-++|+++||||+|+||++++++|+++|++|+++.|+.+.  ..+...++... + .++.++.+|++|.+ ...+....+
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~d~~~~~~~l~~~d   80 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-E-ERLKVFDVDPLDYHSILDALKGCS   80 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-C-CceEEEEecCCCHHHHHHHHcCCC
Confidence            3457899999999999999999999999999999986432  22222332211 2 25788899999976 333444455


Q ss_pred             EEEEec
Q 031009          154 LLVNIY  159 (167)
Q Consensus       154 ilvN~a  159 (167)
                      .++|.+
T Consensus        81 ~v~~~~   86 (297)
T PLN02583         81 GLFCCF   86 (297)
T ss_pred             EEEEeC
Confidence            666643

>PRK06953 short chain dehydrogenase; Provisional

Probab=98.81  E-value=2.4e-08  Score=77.07  Aligned_cols=73  Identities=21%  Similarity=0.199  Sum_probs=55.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh-c----cceE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY-K----YSWL  154 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~-~----~~di  154 (167)
                      |+++|||+++|||++++++|+++|++|++++|+.+..++    +...    .+.++.+|+++.+. +.+. +    ..|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQAL----GAEALALDVADPASVAGLAWKLDGEALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHhc----cceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence            689999999999999999999999999999998765543    2221    24578999999862 2221 1    2688


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      ++|++-.
T Consensus        74 vi~~ag~   80 (222)
T PRK06953         74 AVYVAGV   80 (222)
T ss_pred             EEECCCc
Confidence            8887743

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.80  E-value=2.5e-08  Score=82.45  Aligned_cols=85  Identities=18%  Similarity=0.121  Sum_probs=61.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC---CceEEEEeccCCChh-hhhhhccc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG---EQHVWVPPSRLVSAP-YNIIYKYS  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~d~~-~~~~~~~~  152 (167)
                      .+++|+++||||+|.||..++++|+++|++|++++|..........++....+   ..++.++.+|+.|.+ .....+..
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            57789999999999999999999999999999999865432222222211111   124778999999875 33444458


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||.|..
T Consensus        92 d~ViHlAa~  100 (348)
T PRK15181         92 DYVLHQAAL  100 (348)
T ss_pred             CEEEECccc
Confidence            899999854

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.80  E-value=3e-08  Score=80.41  Aligned_cols=85  Identities=27%  Similarity=0.304  Sum_probs=68.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhcc------c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYKY------S  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~~------~  152 (167)
                      ..++|||+++|||++++.++..+|++|.+..|+.+++++++++++......++.+..+|+.|.+.  ..+...      +
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            47999999999999999999999999999999999999999999877666568899999988762  222221      6


Q ss_pred             eEEEEec---cCcccC
Q 031009          153 WLLVNIY---VPSCFI  165 (167)
Q Consensus       153 dilvN~a---i~~~~~  165 (167)
                      |.++|+|   |+..|.
T Consensus       114 d~l~~cAG~~v~g~f~  129 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFE  129 (331)
T ss_pred             ceEEEecCcccccccc
Confidence            7777766   444443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.79  E-value=4.3e-08  Score=77.68  Aligned_cols=82  Identities=17%  Similarity=0.257  Sum_probs=65.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-----eEEEEeCChhHHHHHHHHHHHHhC--CceEEEEeccCCChhh-h----
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-----NVIICSRSAERVDSAVQSLREEFG--EQHVWVPPSRLVSAPY-N----  146 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-----~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~d~~~-~----  146 (167)
                      ..|+++|||+++|||++++++|++...     ++++.+|+.++.+++...+.+-++  ..++.++.+|+++... .    
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            358999999999999999999998653     477889999999999999988777  4468889999998651 1    


Q ss_pred             ----hhhccceEEEEecc
Q 031009          147 ----IIYKYSWLLVNIYV  160 (167)
Q Consensus       147 ----~~~~~~dilvN~ai  160 (167)
                          .+.+.+.+.+|+|+
T Consensus        82 di~~rf~~ld~iylNAg~   99 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGI   99 (341)
T ss_pred             HHHHHhhhccEEEEcccc
Confidence                12223777788775

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.79  E-value=3.4e-08  Score=76.35  Aligned_cols=77  Identities=29%  Similarity=0.332  Sum_probs=57.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cce
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YSW  153 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~d  153 (167)
                      ++|||++++||..++++|+++|++|++++|+. +..++...+++.. +. ++.++.+|++|... +. +..      ..|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-GV-KALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 4444454555433 33 58889999999762 22 211      268


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      +++|++-.
T Consensus        79 ~vi~~ag~   86 (239)
T TIGR01830        79 ILVNNAGI   86 (239)
T ss_pred             EEEECCCC
Confidence            88887754

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.78  E-value=3.8e-08  Score=76.96  Aligned_cols=74  Identities=30%  Similarity=0.441  Sum_probs=58.8

Q ss_pred             CCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-------h-ccceEE
Q 031009           87 GST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-------Y-KYSWLL  155 (167)
Q Consensus        87 Gas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-------~-~~~dil  155 (167)
                      |++  +|||++++++|+++|++|++++|+.+++++.++++..+.+. +  ++++|+++++ .+.+       . ..+|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA-E--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS-E--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC-c--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  99999999999999999999999999988888888877665 4  4999999886 2221       1 237889


Q ss_pred             EEeccCcc
Q 031009          156 VNIYVPSC  163 (167)
Q Consensus       156 vN~ai~~~  163 (167)
                      ||++-...
T Consensus        78 V~~a~~~~   85 (241)
T PF13561_consen   78 VNNAGISP   85 (241)
T ss_dssp             EEEEESCT
T ss_pred             Eecccccc
Confidence            98875543

...

>PLN02686 cinnamoyl-CoA reductase

Probab=98.78  E-value=5.5e-08  Score=81.19  Aligned_cols=84  Identities=15%  Similarity=0.195  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh--C--CceEEEEeccCCChh-hhhhhc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF--G--EQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~--~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      ...++|+++||||+|+||.+++++|+++|++|+++.|+.+..+++ .++....  +  ...+.++.+|++|.+ ...+.+
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            357789999999999999999999999999999988876654433 2332110  0  114778999999976 333344


Q ss_pred             cceEEEEecc
Q 031009          151 YSWLLVNIYV  160 (167)
Q Consensus       151 ~~dilvN~ai  160 (167)
                      ..+.++|.+.
T Consensus       128 ~~d~V~hlA~  137 (367)
T PLN02686        128 GCAGVFHTSA  137 (367)
T ss_pred             hccEEEecCe
Confidence            4566667664

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.77  E-value=1.8e-08  Score=81.68  Aligned_cols=78  Identities=21%  Similarity=0.364  Sum_probs=57.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCce----EEEEeccCCChh-hhhhhc--cceE
Q 031009           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQH----VWVPPSRLVSAP-YNIIYK--YSWL  154 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~----~~~~~~Dv~d~~-~~~~~~--~~di  154 (167)
                      |+||||+|.||.+++++|++.+ .+++++|+++..+.++..++....+..+    +..+.+|++|.+ ...+.+  ..|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            6999999999999999999999 6799999999999999888865443222    345688999987 344444  4899


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      ++|+|.
T Consensus        81 VfHaAA   86 (293)
T PF02719_consen   81 VFHAAA   86 (293)
T ss_dssp             EEE---
T ss_pred             EEEChh
Confidence            999884

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK08017 oxidoreductase; Provisional

Probab=98.76  E-value=5.1e-08  Score=76.40  Aligned_cols=73  Identities=23%  Similarity=0.152  Sum_probs=54.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhh-------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIY-------KY  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~-------~~  151 (167)
                      |+++|||++||||+++++.|+++|++|++++|+.++++..    ...    .+..+++|++|.+.  ..+.       ..
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSL----GFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhC----CCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999988765432    211    35678899998752  1111       12


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .+.++|++..
T Consensus        75 ~~~ii~~ag~   84 (256)
T PRK08017         75 LYGLFNNAGF   84 (256)
T ss_pred             CeEEEECCCC
Confidence            5788888753

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.75  E-value=3.9e-08  Score=76.55  Aligned_cols=78  Identities=31%  Similarity=0.462  Sum_probs=52.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHC-CCeEEE-EeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhc---c-
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKA-GDNVII-CSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYK---Y-  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~-G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~---~-  151 (167)
                      .|.++||||.+|||+.++++|++. |-.+++ ..|+.++..+..++. .. ...+++.+++||++.+  ...+.+   . 
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k-~~-~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALK-SK-SDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHh-hc-cCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            456999999999999999999974 555555 556677653222222 22 2237999999999765  222221   1 


Q ss_pred             ----ceEEEEec
Q 031009          152 ----SWLLVNIY  159 (167)
Q Consensus       152 ----~dilvN~a  159 (167)
                          .++++|||
T Consensus        81 g~~GlnlLinNa   92 (249)
T KOG1611|consen   81 GSDGLNLLINNA   92 (249)
T ss_pred             ccCCceEEEecc
Confidence                78888887

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.75  E-value=6.6e-08  Score=78.46  Aligned_cols=81  Identities=17%  Similarity=0.199  Sum_probs=59.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCCh---hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA---ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~  151 (167)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++....+  .+.+..+|+.+.+ .......
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~--~~~~~~~d~~~~~~~~~~~~~  199 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP--ECIVNVYDLNDTEKLKAEIAS  199 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC--CceeEEechhhhhHHHhhhcc
Confidence            467899999999 69999999999999986 99999987   666666666644322  3455667887654 2223334


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|++||+-.
T Consensus       200 ~DilINaTp  208 (289)
T PRK12548        200 SDILVNATL  208 (289)
T ss_pred             CCEEEEeCC
Confidence            689999763

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.74  E-value=5.4e-08  Score=75.28  Aligned_cols=70  Identities=29%  Similarity=0.239  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc-----c
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK-----Y  151 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~-----~  151 (167)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.      ..    +   ..++.+|++|.+. +. +..     .
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~----~---~~~~~~D~~~~~~~~~~~~~~~~~~~   68 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DF----P---GELFACDLADIEQTAATLAQINEIHP   68 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------cc----C---ceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999998653      00    1   2467899998762 21 211     2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|+++|++..
T Consensus        69 ~d~vi~~ag~   78 (234)
T PRK07577         69 VDAIVNNVGI   78 (234)
T ss_pred             CcEEEECCCC
Confidence            6888888754

>PLN02427 UDP-apiose/xylose synthase

Probab=98.72  E-value=4.7e-08  Score=81.73  Aligned_cols=83  Identities=11%  Similarity=0.184  Sum_probs=59.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~di  154 (167)
                      ..+.++|+||||+|.||..++++|+++ |++|++++|+.+.............. .++.++.+|++|.+ ...+.+..|+
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~-~~~~~~~~Dl~d~~~l~~~~~~~d~   89 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWS-GRIQFHRINIKHDSRLEGLIKMADL   89 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCC-CCeEEEEcCCCChHHHHHHhhcCCE
Confidence            455678999999999999999999998 59999999876544322111000011 25889999999976 3344445799


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      +||.|.
T Consensus        90 ViHlAa   95 (386)
T PLN02427         90 TINLAA   95 (386)
T ss_pred             EEEccc
Confidence            999885

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.72  E-value=8.1e-08  Score=70.08  Aligned_cols=78  Identities=22%  Similarity=0.256  Sum_probs=55.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHH---HHHHHHHhCCceEEEEeccCCChhh--hhhhcc---
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA---VQSLREEFGEQHVWVPPSRLVSAPY--NIIYKY---  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~~---  151 (167)
                      |+++|||+++|||++++++|+++|+ .|++.+|+++..+..   .++++.. +. ++.++.+|++++..  ..+...   
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL-GA-EVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999996 688888876543322   2344332 33 68889999998752  221221   


Q ss_pred             ---ceEEEEecc
Q 031009          152 ---SWLLVNIYV  160 (167)
Q Consensus       152 ---~dilvN~ai  160 (167)
                         +|.++|++.
T Consensus        79 ~~~id~li~~ag   90 (180)
T smart00822       79 LGPLRGVIHAAG   90 (180)
T ss_pred             cCCeeEEEEccc
Confidence               588888875

It uses NADPH to reduce the keto group to a hydroxy group.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.71  E-value=1.5e-07  Score=71.08  Aligned_cols=77  Identities=21%  Similarity=0.258  Sum_probs=54.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh---hHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc-----
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---ERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK-----  150 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~-----  150 (167)
                      +++||||.||||+.+++.|+++| .+|+++.|+.   ...++..++++.. +. ++.+.++|++|+++ ..+ ..     
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~-~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GA-RVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T--EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CC-ceeeeccCccCHHHHHHHHHHHHhcc
Confidence            68999999999999999999998 5799999983   2345567777665 44 79999999999872 222 21     


Q ss_pred             -cceEEEEecc
Q 031009          151 -YSWLLVNIYV  160 (167)
Q Consensus       151 -~~dilvN~ai  160 (167)
                       -++.++|.+.
T Consensus        80 ~~i~gVih~ag   90 (181)
T PF08659_consen   80 GPIDGVIHAAG   90 (181)
T ss_dssp             S-EEEEEE---
T ss_pred             CCcceeeeeee
Confidence             1677888774

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.69  E-value=8.5e-08  Score=95.67  Aligned_cols=37  Identities=30%  Similarity=0.447  Sum_probs=34.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRS  113 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~  113 (167)
                      .-++++++||||++|||++++++|+++ |++|++++|+
T Consensus      1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1994 LNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            346899999999999999999999998 6999999998

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.67  E-value=7.4e-08  Score=74.71  Aligned_cols=70  Identities=21%  Similarity=0.238  Sum_probs=49.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---cceE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---YSWL  154 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---~~di  154 (167)
                      |+++||||++|||++++++|+++|  ..|++.+|+...      +.    ...++.++++|+++.+ .+.+.+   ..|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~------~~----~~~~~~~~~~Dls~~~~~~~~~~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP------DF----QHDNVQWHALDVTDEAEIKQLSEQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc------cc----ccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            479999999999999999999985  566666665432      11    1126788999999876 222222   2678


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      +|||+-
T Consensus        71 li~~aG   76 (235)
T PRK09009         71 LINCVG   76 (235)
T ss_pred             EEECCc
Confidence            888774

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.67  E-value=1.3e-07  Score=77.29  Aligned_cols=78  Identities=18%  Similarity=0.205  Sum_probs=55.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN~  158 (167)
                      +++||||+|+||++++++|+++|++|++++|..+........+....+. ++.++.+|++|.+ ...+.+  ..|++||+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK-HPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCC-CceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            5999999999999999999999999999886543332222333322222 5677899999876 233332  37888998


Q ss_pred             cc
Q 031009          159 YV  160 (167)
Q Consensus       159 ai  160 (167)
                      |.
T Consensus        81 a~   82 (338)
T PRK10675         81 AG   82 (338)
T ss_pred             Cc
Confidence            74

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.64  E-value=2e-07  Score=73.48  Aligned_cols=77  Identities=12%  Similarity=0.151  Sum_probs=55.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh-h-hhhhh-ccce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA-P-YNIIY-KYSW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~-~~~~~-~~~d  153 (167)
                      ...+|+++|||++|+||+.++++|+++|++|+++.|+.+...+...    . +. .+.++++|++|. . ..... ...|
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~-~~-~~~~~~~Dl~d~~~~l~~~~~~~~d   87 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q-DP-SLQIVRADVTEGSDKLVEAIGDDSD   87 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c-CC-ceEEEEeeCCCCHHHHHHHhhcCCC
Confidence            4557899999999999999999999999999999998765432211    1 12 578899999884 2 22222 3456


Q ss_pred             EEEEec
Q 031009          154 LLVNIY  159 (167)
Q Consensus       154 ilvN~a  159 (167)
                      ++++++
T Consensus        88 ~vi~~~   93 (251)
T PLN00141         88 AVICAT   93 (251)
T ss_pred             EEEECC
Confidence            666664

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=98.59  E-value=2.7e-07  Score=75.25  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=61.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-CceEEEEeccCCChh-hhhhhc-c-ceEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWVPPSRLVSAP-YNIIYK-Y-SWLL  155 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~-~~~~~~-~-~dil  155 (167)
                      ++.|+||||+|.||.+.+.+|++.|+.|+++|.-.....+.+..++...+ ...+.+++.|+.|.+ .+..++ . .|.+
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            57899999999999999999999999999998755544444444444433 237999999999987 333333 3 7888


Q ss_pred             EEecc
Q 031009          156 VNIYV  160 (167)
Q Consensus       156 vN~ai  160 (167)
                      +|.|.
T Consensus        82 ~Hfa~   86 (343)
T KOG1371|consen   82 MHFAA   86 (343)
T ss_pred             Eeehh
Confidence            88764

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.57  E-value=2e-07  Score=70.71  Aligned_cols=60  Identities=22%  Similarity=0.225  Sum_probs=47.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--cceEEEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--YSWLLVN  157 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--~~dilvN  157 (167)
                      +++|||+++|||++++++|+++ ++|++.+|+.+                   .+++|++|.+ .+. +..  ..|++||
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv~   61 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVVS   61 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence            6999999999999999999999 99999998752                   2678999876 222 222  3788888


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      ++-.
T Consensus        62 ~ag~   65 (199)
T PRK07578         62 AAGK   65 (199)
T ss_pred             CCCC
Confidence            8754

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.56  E-value=6.6e-07  Score=69.97  Aligned_cols=81  Identities=22%  Similarity=0.356  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhcc
Q 031009           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYKY  151 (167)
Q Consensus        76 ~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~~  151 (167)
                      ..|+||+++|+|-+  ++|+..||+.|.++|+++......+ ++++-++++.++.+.  ..+++|||++.+ .. .+...
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s--~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS--DLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC--CeEEecCCCCHHHHHHHHHHH
Confidence            47899999999976  5899999999999999999998876 777777777766554  678999999876 22 22221


Q ss_pred             ------ceEEEEec
Q 031009          152 ------SWLLVNIY  159 (167)
Q Consensus       152 ------~dilvN~a  159 (167)
                            +|.+||.-
T Consensus        79 ~~~~g~lD~lVHsI   92 (259)
T COG0623          79 KKKWGKLDGLVHSI   92 (259)
T ss_pred             HHhhCcccEEEEEe
Confidence                  78888853

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.55  E-value=8.5e-07  Score=67.63  Aligned_cols=80  Identities=23%  Similarity=0.237  Sum_probs=59.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      ++++++++|.|++|++|+.+++.|+++|++|++++|+.+++++..+++.+..+   .....+|..+.+ ........|++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG---EGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC---CcEEEeeCCCHHHHHHHHhcCCEE
Confidence            57889999999999999999999999999999999999888877777654322   234455666644 22333445677


Q ss_pred             EEec
Q 031009          156 VNIY  159 (167)
Q Consensus       156 vN~a  159 (167)
                      +++.
T Consensus       102 i~at  105 (194)
T cd01078         102 FAAG  105 (194)
T ss_pred             EECC
Confidence            7754

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.55  E-value=5.8e-07  Score=67.17  Aligned_cols=69  Identities=25%  Similarity=0.311  Sum_probs=56.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEeccC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIYVP  161 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~ai~  161 (167)
                      |+|+||+|.+|+.++++|++.|++|+++.|++++.++          ...+.++++|+.|.+ .....+..|.++++.-+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            6899999999999999999999999999999987654          226999999999986 44455567777776643

...

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.54  E-value=2.1e-07  Score=76.64  Aligned_cols=79  Identities=13%  Similarity=0.160  Sum_probs=52.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEE-EEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLV  156 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilv  156 (167)
                      |+++||||+|+||.++++.|+++|++++ +.++..... .. ..+.......++.++.+|++|.+ ...+.+  ..|++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAG-NL-MSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM   79 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcccc-ch-hhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence            5799999999999999999999998744 555543211 11 11111111125778899999976 333333  278999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|..
T Consensus        80 h~A~~   84 (355)
T PRK10217         80 HLAAE   84 (355)
T ss_pred             ECCcc
Confidence            98854

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.53  E-value=4.1e-07  Score=74.22  Aligned_cols=71  Identities=17%  Similarity=0.181  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEecc
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIYV  160 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~ai  160 (167)
                      +++||||+|.+|+.++++|+++|++|++++|+.+...    .+..   . .+.++.+|++|.+ ...+.+..|+++|.+.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~~---~-~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLKE---W-GAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHhh---c-CCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            6999999999999999999999999999999865432    2211   1 4788999999976 3444455788888653

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.52  E-value=1e-06  Score=66.75  Aligned_cols=59  Identities=15%  Similarity=0.191  Sum_probs=47.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +++||||+ |+|.++++.|+++|++|++.+|+.+..++....+..  .. ++.++++|++|.+
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~-~i~~~~~Dv~d~~   60 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PE-SITPLPLDYHDDD   60 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CC-cEEEEEccCCCHH
Confidence            68999998 788889999999999999999998776665544432  22 5888999999976

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.50  E-value=2.3e-07  Score=75.08  Aligned_cols=73  Identities=21%  Similarity=0.243  Sum_probs=56.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEec
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      ++++|||++|+||+.+++.|+++|++|++++|+.+....    +.    ...+.++.+|++|.+ ...+.+..|+++|++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a   72 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE----GLDVEIVEGDLRDPASLRKAVAGCRALFHVA   72 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc----cCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence            369999999999999999999999999999998654321    11    114778999999976 334444578888887


Q ss_pred             cC
Q 031009          160 VP  161 (167)
Q Consensus       160 i~  161 (167)
                      ..
T Consensus        73 ~~   74 (328)
T TIGR03466        73 AD   74 (328)
T ss_pred             ee
Confidence            43

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.42  E-value=8.7e-07  Score=71.13  Aligned_cols=77  Identities=13%  Similarity=0.146  Sum_probs=52.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHH-HHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ceEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERV-DSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SWLL  155 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~dil  155 (167)
                      +++||||+|+||.+++++|++.|  ++|++++|..... .+..+.+.   ....+.++.+|++|.+ ...+.+.  .|++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            38999999999999999999987  7899888643211 11112221   1125778899999977 3333333  7899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||+|..
T Consensus        78 i~~a~~   83 (317)
T TIGR01181        78 VHFAAE   83 (317)
T ss_pred             EEcccc
Confidence            998854

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.42  E-value=7.2e-07  Score=72.29  Aligned_cols=75  Identities=19%  Similarity=0.226  Sum_probs=56.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhc-cceEEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYK-YSWLLVN  157 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~-~~dilvN  157 (167)
                      +.+|||||+|.||..++.+|++.|++|+++|.-.....+.+...       ...++++|+.|.+  .+.+.+ .++.++|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            36999999999999999999999999999998655443333221       1578999999987  334444 3888988


Q ss_pred             eccCc
Q 031009          158 IYVPS  162 (167)
Q Consensus       158 ~ai~~  162 (167)
                      .|-..
T Consensus        74 FAa~~   78 (329)
T COG1087          74 FAASI   78 (329)
T ss_pred             Ccccc
Confidence            77443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.40  E-value=1.7e-06  Score=70.66  Aligned_cols=80  Identities=23%  Similarity=0.231  Sum_probs=54.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHH---HHHHHHHHHHh------CCceEEEEeccCCChh------
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERV---DSAVQSLREEF------GEQHVWVPPSRLVSAP------  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~---~~~~~~l~~~~------~~~~~~~~~~Dv~d~~------  144 (167)
                      +++||||+|+||..++++|+++|  ++|+++.|+.+..   +++.+.+....      ...++.++.+|+++..      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7799999976532   22222222110      0026888999988642      


Q ss_pred             -hhhhhccceEEEEeccC
Q 031009          145 -YNIIYKYSWLLVNIYVP  161 (167)
Q Consensus       145 -~~~~~~~~dilvN~ai~  161 (167)
                       ........|+++|+|..
T Consensus        81 ~~~~~~~~~d~vih~a~~   98 (367)
T TIGR01746        81 EWERLAENVDTIVHNGAL   98 (367)
T ss_pred             HHHHHHhhCCEEEeCCcE
Confidence             22233447888888753

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.36  E-value=2.5e-06  Score=70.24  Aligned_cols=73  Identities=18%  Similarity=0.168  Sum_probs=53.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCC-Chh-hhhhhccceEEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLV-SAP-YNIIYKYSWLLVN  157 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-d~~-~~~~~~~~dilvN  157 (167)
                      |+++||||+|.||..++++|++. |++|++++|+.+...    .+.   +...+.++.+|++ +.+ .....+..|+++|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV---NHPRMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc---cCCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            47999999999999999999986 699999998764322    111   1125888899998 443 3333345789999


Q ss_pred             ecc
Q 031009          158 IYV  160 (167)
Q Consensus       158 ~ai  160 (167)
                      .|.
T Consensus        75 ~aa   77 (347)
T PRK11908         75 LVA   77 (347)
T ss_pred             Ccc
Confidence            774

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.36  E-value=1.4e-06  Score=70.17  Aligned_cols=77  Identities=14%  Similarity=0.198  Sum_probs=53.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN~  158 (167)
                      +++||||+|+||..++++|+++|++|++.++......+...++... +  .+.++.+|+++.+ ...+..  ..|+++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-T--RVTFVEGDLRDRELLDRLFEEHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-c--ceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            3799999999999999999999999998876443222222222111 1  4677889999877 222222  37888888


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      +-.
T Consensus        78 ag~   80 (328)
T TIGR01179        78 AGL   80 (328)
T ss_pred             ccc
Confidence            743

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.34  E-value=1.5e-06  Score=72.63  Aligned_cols=77  Identities=14%  Similarity=0.028  Sum_probs=55.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~~~dil  155 (167)
                      .-++|+++||||+|.||.++++.|.++|++|++++|.....      +...  .....++.+|++|.+. ..+....|++
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~V   89 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED--MFCHEFHLVDLRVMENCLKVTKGVDHV   89 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc--cccceEEECCCCCHHHHHHHHhCCCEE
Confidence            44678899999999999999999999999999999864321      1010  1124567889998762 2333457899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      +|.|..
T Consensus        90 ih~Aa~   95 (370)
T PLN02695         90 FNLAAD   95 (370)
T ss_pred             EEcccc
Confidence            998853

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.33  E-value=2.1e-06  Score=70.60  Aligned_cols=78  Identities=13%  Similarity=0.224  Sum_probs=51.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVN  157 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN  157 (167)
                      +++||||+|+||..++++|+++|+. |+.+++......  ...+.......++.++.+|++|.+ ...+.+  ..|++||
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            5999999999999999999999976 555665321100  011111111225778899999976 233332  2789999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      +|..
T Consensus        80 ~A~~   83 (352)
T PRK10084         80 LAAE   83 (352)
T ss_pred             CCcc
Confidence            9854

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.31  E-value=2.6e-06  Score=76.29  Aligned_cols=77  Identities=14%  Similarity=0.132  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhccce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYKYSW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~~~d  153 (167)
                      ..++|+++||||+|.||..++++|+++ |++|++++|.......    +.   ....+.++.+|++|..  ...+.+..|
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~---~~~~~~~~~gDl~d~~~~l~~~l~~~D  384 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL---GHPRFHFVEGDISIHSEWIEYHIKKCD  384 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc---CCCceEEEeccccCcHHHHHHHhcCCC
Confidence            357789999999999999999999986 7999999997643221    11   1125788899999854  233344588


Q ss_pred             EEEEecc
Q 031009          154 LLVNIYV  160 (167)
Q Consensus       154 ilvN~ai  160 (167)
                      +++|.|.
T Consensus       385 ~ViHlAa  391 (660)
T PRK08125        385 VVLPLVA  391 (660)
T ss_pred             EEEECcc
Confidence            9999774

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.31  E-value=2.8e-06  Score=65.45  Aligned_cols=72  Identities=28%  Similarity=0.332  Sum_probs=54.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ceEEEEec
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SWLLVNIY  159 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~dilvN~a  159 (167)
                      |+||||+|.||.+++++|+++|+.|+.+.|..........+.       ++.++.+|+.|.+ ...+.+.  .|.++|.|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-------NVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-------TEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-------eEEEEEeeccccccccccccccCceEEEEee
Confidence            799999999999999999999999888888765433221111       5889999999876 3333333  58888888


Q ss_pred             cC
Q 031009          160 VP  161 (167)
Q Consensus       160 i~  161 (167)
                      ..
T Consensus        74 ~~   75 (236)
T PF01370_consen   74 AF   75 (236)
T ss_dssp             SS
T ss_pred             cc
Confidence            65

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.31  E-value=6.5e-06  Score=70.58  Aligned_cols=78  Identities=15%  Similarity=0.188  Sum_probs=55.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .-++|+|+||||+|.||+.++++|+++|++|+++++......+.   +.......++.++..|+.+...    ...|+++
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~l----~~~D~Vi  188 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPIL----LEVDQIY  188 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChhh----cCCCEEE
Confidence            34678999999999999999999999999999998753322111   1111122257778889877542    2368999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |.|..
T Consensus       189 HlAa~  193 (442)
T PLN02206        189 HLACP  193 (442)
T ss_pred             Eeeee
Confidence            98853

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.29  E-value=1.6e-06  Score=69.67  Aligned_cols=73  Identities=22%  Similarity=0.215  Sum_probs=55.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccc-eEEEEec
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYS-WLLVNIY  159 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~-dilvN~a  159 (167)
                      .|+|||++|.||..++++|.++|++|+.++|.........         ..+.++.+|+++.+ ........ |.++|.|
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~a   72 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLA   72 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcCCCEEEEcc
Confidence            3999999999999999999999999999999776543221         14778888988865 33333344 8888888


Q ss_pred             cCcc
Q 031009          160 VPSC  163 (167)
Q Consensus       160 i~~~  163 (167)
                      ....
T Consensus        73 a~~~   76 (314)
T COG0451          73 AQSS   76 (314)
T ss_pred             ccCc
Confidence            6543

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.26  E-value=2.4e-06  Score=69.03  Aligned_cols=76  Identities=16%  Similarity=0.155  Sum_probs=55.9

Q ss_pred             EEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEecc
Q 031009           84 LITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIYV  160 (167)
Q Consensus        84 lITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~ai  160 (167)
                      |||||+|.+|..++++|+++|  ++|.++++.......  ..+... +  ...++.+|++|.+ ...+.+..|+++|.|-
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~-~--~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS-G--VKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc-c--ceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            699999999999999999999  789999987653221  112111 1  2338999999987 5566667889999986


Q ss_pred             Cccc
Q 031009          161 PSCF  164 (167)
Q Consensus       161 ~~~~  164 (167)
                      +...
T Consensus        76 ~~~~   79 (280)
T PF01073_consen   76 PVPP   79 (280)
T ss_pred             cccc
Confidence            5443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.22  E-value=6e-06  Score=73.97  Aligned_cols=81  Identities=15%  Similarity=0.213  Sum_probs=56.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC--CCeEEEEeCCh--hHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh--hc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSA--ERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII--YK  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~--~~  150 (167)
                      .++|+|+||||+|.||+.++++|+++  |++|+++++..  +...    .+.......++.++.+|++|.+. ...  ..
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~----~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   79 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK----NLNPSKSSPNFKFVKGDIASADLVNYLLITE   79 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh----hhhhcccCCCeEEEECCCCChHHHHHHHhhc
Confidence            45689999999999999999999998  68899998753  1111    11111111258889999999762 222  23


Q ss_pred             cceEEEEeccCc
Q 031009          151 YSWLLVNIYVPS  162 (167)
Q Consensus       151 ~~dilvN~ai~~  162 (167)
                      ..|++||+|-..
T Consensus        80 ~~D~ViHlAa~~   91 (668)
T PLN02260         80 GIDTIMHFAAQT   91 (668)
T ss_pred             CCCEEEECCCcc
Confidence            489999988643

>PLN00016 RNA-binding protein; Provisional

Probab=98.16  E-value=5.4e-06  Score=69.34  Aligned_cols=82  Identities=22%  Similarity=0.171  Sum_probs=54.3

Q ss_pred             CCCCCEEEEe----CCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH----HHHHHHhCCceEEEEeccCCChhhhhh
Q 031009           77 MLPPYNVLIT----GSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV----QSLREEFGEQHVWVPPSRLVSAPYNII  148 (167)
Q Consensus        77 ~l~gk~vlIT----Gas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~----~~l~~~~~~~~~~~~~~Dv~d~~~~~~  148 (167)
                      ....++|+||    ||+|.||..++++|+++|++|++++|+........    ..+...... .+.++.+|+.|.+....
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-~v~~v~~D~~d~~~~~~  127 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA-GVKTVWGDPADVKSKVA  127 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc-CceEEEecHHHHHhhhc
Confidence            3445789999    99999999999999999999999999875432211    001111111 37788889877332222


Q ss_pred             hccceEEEEec
Q 031009          149 YKYSWLLVNIY  159 (167)
Q Consensus       149 ~~~~dilvN~a  159 (167)
                      ....|+++|++
T Consensus       128 ~~~~d~Vi~~~  138 (378)
T PLN00016        128 GAGFDVVYDNN  138 (378)
T ss_pred             cCCccEEEeCC
Confidence            23367777764

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.15  E-value=1.2e-05  Score=71.36  Aligned_cols=76  Identities=18%  Similarity=0.177  Sum_probs=54.0

Q ss_pred             EEEEeCCCCchHHHHHHHHH--HCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-------hhhhhccc
Q 031009           82 NVLITGSTKGIGYALAKEFL--KAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-------YNIIYKYS  152 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~--~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-------~~~~~~~~  152 (167)
                      +++||||+|.||..++++|+  +.|++|++++|+... ... ..+....+..++.++.+|++|.+       ...+ ...
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~   78 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDI   78 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCC
Confidence            69999999999999999999  589999999996532 111 22222222236888999999842       2222 457


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |+++|+|.
T Consensus        79 D~Vih~Aa   86 (657)
T PRK07201         79 DHVVHLAA   86 (657)
T ss_pred             CEEEECce
Confidence            88999874

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.14  E-value=2.5e-05  Score=69.42  Aligned_cols=87  Identities=16%  Similarity=0.229  Sum_probs=60.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC---CeEEEEeCChhH---HHHHHHHH---------HHHhC-------CceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAER---VDSAVQSL---------REEFG-------EQHVW  134 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G---~~Vi~~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~  134 (167)
                      .+++|+++||||+|.||..+++.|++.+   .+|+++.|....   .+....++         ++..+       ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            4789999999999999999999999875   368998885432   12221122         22222       23688


Q ss_pred             EEeccCCChh-------hhhhhccceEEEEeccCcc
Q 031009          135 VPPSRLVSAP-------YNIIYKYSWLLVNIYVPSC  163 (167)
Q Consensus       135 ~~~~Dv~d~~-------~~~~~~~~dilvN~ai~~~  163 (167)
                      ++.+|+++..       .+.+....|+++|.|....
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~  231 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT  231 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc
Confidence            9999999862       2333345899999986543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.13  E-value=1e-05  Score=69.25  Aligned_cols=77  Identities=17%  Similarity=0.232  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVN  157 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN  157 (167)
                      -+.++|+||||+|.||..++++|+++|++|++++|......+....+   .+..++.++..|+.+...    ...|+++|
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~~----~~~D~ViH  190 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPIL----LEVDQIYH  190 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECccccccc----cCCCEEEE
Confidence            34567999999999999999999999999999998632211111111   112257788888876542    24689999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      .|..
T Consensus       191 lAa~  194 (436)
T PLN02166        191 LACP  194 (436)
T ss_pred             Ccee
Confidence            8854

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.06  E-value=1e-05  Score=68.50  Aligned_cols=75  Identities=21%  Similarity=0.226  Sum_probs=52.0

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEecc
Q 031009           76 PMLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSR  139 (167)
Q Consensus        76 ~~l~gk~vlITGa----------------s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (167)
                      .+++||+++||||                +|++|+++|++|+++|++|++++++.+ .+     .    ..   .+..+|
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~----~~---~~~~~d  250 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T----PA---GVKRID  250 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C----CC---CcEEEc
Confidence            3589999999999                555999999999999999999998652 11     0    11   124568


Q ss_pred             CCChh--hhhhh---ccceEEEEeccCcc
Q 031009          140 LVSAP--YNIIY---KYSWLLVNIYVPSC  163 (167)
Q Consensus       140 v~d~~--~~~~~---~~~dilvN~ai~~~  163 (167)
                      +++.+  .....   ...|++||+|-..-
T Consensus       251 v~~~~~~~~~v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        251 VESAQEMLDAVLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             cCCHHHHHHHHHHhcCCCCEEEEcccccc
Confidence            88754  22221   22688888875443

>PRK05865 hypothetical protein; Provisional

Probab=98.05  E-value=1.5e-05  Score=73.09  Aligned_cols=69  Identities=13%  Similarity=0.120  Sum_probs=54.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEecc
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIYV  160 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~ai  160 (167)
                      +++||||+|+||.+++++|+++|++|++++|+....      +    .. .+.++.+|++|.+ ...+.+..|++||+|.
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~~-~v~~v~gDL~D~~~l~~al~~vD~VVHlAa   70 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----PS-SADFIAADIRDATAVESAMTGADVVAHCAW   70 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----cc-CceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence            599999999999999999999999999999875321      1    11 4778899999976 3344455789999874


Q ss_pred             C
Q 031009          161 P  161 (167)
Q Consensus       161 ~  161 (167)
                      .
T Consensus        71 ~   71 (854)
T PRK05865         71 V   71 (854)
T ss_pred             c
Confidence            3

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.04  E-value=3.1e-05  Score=55.92  Aligned_cols=47  Identities=26%  Similarity=0.422  Sum_probs=43.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSL  124 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~~~~~~~l  124 (167)
                      ++++|.++|-|+ ||.|++++..|.+.|++ |+++.|+.++++++.+++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            689999999998 99999999999999977 999999999888777766

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK12320 hypothetical protein; Provisional

Probab=98.03  E-value=2e-05  Score=70.97  Aligned_cols=69  Identities=13%  Similarity=0.141  Sum_probs=53.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEeccC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVP  161 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~ai~  161 (167)
                      +++||||+|.||..++++|.++|++|++++|....       .  . .. .+.++.+|+++..........|+++|.+-.
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~--~-~~-~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~   70 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A--L-DP-RVDYVCASLRNPVLQELAGEADAVIHLAPV   70 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c--c-cC-CceEEEccCCCHHHHHHhcCCCEEEEcCcc
Confidence            59999999999999999999999999999986432       1  0 11 477899999987533333457889998743

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.00  E-value=3.1e-05  Score=66.13  Aligned_cols=74  Identities=24%  Similarity=0.212  Sum_probs=52.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ++++|+++|+|+++ +|.++++.|+++|++|++++++. +..++..+++...    .+.++..|..+..    ....|++
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~----~~~~d~v   72 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEEF----LEGVDLV   72 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchhH----hhcCCEE
Confidence            57899999999866 99999999999999999999975 4444444555332    2456677776622    2234555


Q ss_pred             EEec
Q 031009          156 VNIY  159 (167)
Q Consensus       156 vN~a  159 (167)
                      |+++
T Consensus        73 v~~~   76 (450)
T PRK14106         73 VVSP   76 (450)
T ss_pred             EECC
Confidence            5544

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.99  E-value=5.7e-05  Score=62.73  Aligned_cols=48  Identities=25%  Similarity=0.387  Sum_probs=41.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-C-CeEEEEeCChhHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-G-DNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G-~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      ++++|+++||||+|.||..++++|+++ | .++++++|+.+++++...++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            689999999999999999999999864 6 58999999988877766655

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.98  E-value=3.1e-05  Score=65.25  Aligned_cols=75  Identities=23%  Similarity=0.341  Sum_probs=59.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEe
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      +.++|-|+ |++|+.+++.|++.| .+|++.+|+.+++.+.....    +. ++...++|+.|.+ ...+.+..|+++|+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----~~-~v~~~~vD~~d~~al~~li~~~d~VIn~   75 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----GG-KVEALQVDAADVDALVALIKDFDLVINA   75 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----cc-cceeEEecccChHHHHHHHhcCCEEEEe
Confidence            56899999 999999999999999 89999999998876654432    22 6899999999975 33344445999998


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      +-+
T Consensus        76 ~p~   78 (389)
T COG1748          76 APP   78 (389)
T ss_pred             CCc
Confidence            743

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=97.98  E-value=1.7e-05  Score=64.33  Aligned_cols=60  Identities=18%  Similarity=0.234  Sum_probs=44.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN~  158 (167)
                      +++||||+|.||.+++++|+++| +|++++|...                   .+..|++|.+ ...+.+  ..|+++|.
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~   61 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKIRPDVIVNA   61 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence            59999999999999999999999 7888887521                   1346888765 222222  26788887


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |..
T Consensus        62 Aa~   64 (299)
T PRK09987         62 AAH   64 (299)
T ss_pred             Ccc
Confidence            754

>PLN02996 fatty acyl-CoA reductase

Probab=97.96  E-value=4e-05  Score=66.57  Aligned_cols=86  Identities=17%  Similarity=0.295  Sum_probs=57.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC---CeEEEEeCChhH---HHHHHHHH---------HHHhC-------CceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAER---VDSAVQSL---------REEFG-------EQHVW  134 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G---~~Vi~~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~  134 (167)
                      .++||+++||||+|.||..+++.|++.+   .+|+++.|....   .+.+..++         .+..+       ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            5789999999999999999999999864   368888886531   11111111         11111       13689


Q ss_pred             EEeccCCCh-------h-hhhhhccceEEEEeccCc
Q 031009          135 VPPSRLVSA-------P-YNIIYKYSWLLVNIYVPS  162 (167)
Q Consensus       135 ~~~~Dv~d~-------~-~~~~~~~~dilvN~ai~~  162 (167)
                      ++.+|++++       + ...+.+..|+++|+|...
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v  123 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATT  123 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHhCCCEEEECcccc
Confidence            999999843       2 233444589999998543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.96  E-value=2.2e-05  Score=63.70  Aligned_cols=78  Identities=14%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLL  155 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dil  155 (167)
                      +.++||||+|.||...++.+.++.  .+|+.+|.-.-...  .+.+....+..++.|+++|+.|.+ ...+.+  ..|++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn--~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~V   78 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGN--LENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAV   78 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCC--HHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence            468999999999999999999887  44677765221110  112222223347999999999977 333333  38999


Q ss_pred             EEecc
Q 031009          156 VNIYV  160 (167)
Q Consensus       156 vN~ai  160 (167)
                      +|.|.
T Consensus        79 vhfAA   83 (340)
T COG1088          79 VHFAA   83 (340)
T ss_pred             EEech
Confidence            99884

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.95  E-value=2e-05  Score=62.77  Aligned_cols=31  Identities=29%  Similarity=0.492  Sum_probs=29.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ++||||+|+||..++++|+++|++|++++|.
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            7999999999999999999999999999885

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=97.94  E-value=2.4e-05  Score=61.82  Aligned_cols=80  Identities=16%  Similarity=0.268  Sum_probs=46.9

Q ss_pred             EeCCCCchHHHHHHHHHHCCC--eEEEEeCChhH---HHHHHHHHH-----HHh---CCceEEEEeccCCChh-------
Q 031009           85 ITGSTKGIGYALAKEFLKAGD--NVIICSRSAER---VDSAVQSLR-----EEF---GEQHVWVPPSRLVSAP-------  144 (167)
Q Consensus        85 ITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~---~~~~~~~l~-----~~~---~~~~~~~~~~Dv~d~~-------  144 (167)
                      |||++|.+|..+.++|++.+.  +|+++.|..+.   .+++.+.+.     ...   ...++.++.+|++++.       
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997632   222222211     111   1237999999999864       


Q ss_pred             hhhhhccceEEEEeccCccc
Q 031009          145 YNIIYKYSWLLVNIYVPSCF  164 (167)
Q Consensus       145 ~~~~~~~~dilvN~ai~~~~  164 (167)
                      ........++++|+|..-.|
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~  100 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNF  100 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SB
T ss_pred             hhccccccceeeecchhhhh
Confidence            22333458999999865443

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.88  E-value=4.1e-05  Score=61.85  Aligned_cols=80  Identities=18%  Similarity=0.211  Sum_probs=55.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      ...+++++||||+|.||..++..|..+|+.|+++|.....-.+.++.   ..+......+..|+...    +....|.++
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~---~~~~~~fel~~hdv~~p----l~~evD~Iy   96 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEH---WIGHPNFELIRHDVVEP----LLKEVDQIY   96 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcch---hccCcceeEEEeechhH----HHHHhhhhh
Confidence            45668899999999999999999999999999999765433322222   22333566777777665    334466677


Q ss_pred             EeccCcc
Q 031009          157 NIYVPSC  163 (167)
Q Consensus       157 N~ai~~~  163 (167)
                      |.|.+..
T Consensus        97 hLAapas  103 (350)
T KOG1429|consen   97 HLAAPAS  103 (350)
T ss_pred             hhccCCC
Confidence            7665544

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.84  E-value=7.9e-05  Score=60.10  Aligned_cols=48  Identities=25%  Similarity=0.387  Sum_probs=42.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      .+.+|+++|+|+ ||+|++++..|...| .+|++++|+.++.+++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578899999997 899999999999999 789999999988877766664

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.82  E-value=9.6e-05  Score=58.13  Aligned_cols=54  Identities=28%  Similarity=0.330  Sum_probs=46.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .++||||+|.+|.+++++|.++|++|++..|+.+......         ..+.+...|+.+..
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~   55 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPK   55 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHh
Confidence            5899999999999999999999999999999988765432         25788888998877

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=97.76  E-value=0.00013  Score=56.75  Aligned_cols=70  Identities=21%  Similarity=0.224  Sum_probs=49.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEe
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      |+|+|++|.+|+.+++.|++.|++|.++.|+...  +...+++.. |   +.++.+|..|.+ ...+.+..|.++.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~-g---~~vv~~d~~~~~~l~~al~g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL-G---AEVVEADYDDPESLVAALKGVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT-T---TEEEES-TT-HHHHHHHHTTCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc-c---ceEeecccCCHHHHHHHHcCCceEEee
Confidence            6899999999999999999999999999998733  223444443 3   356699998876 44445555555433

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.76  E-value=6.4e-05  Score=60.49  Aligned_cols=70  Identities=13%  Similarity=0.116  Sum_probs=47.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh----ccceEEE
Q 031009           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY----KYSWLLV  156 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~----~~~dilv  156 (167)
                      ++||||+|.||..+++.|.++|+ .|++++|..... . ..++    .   ......|+.+.+ .+.+.    ...|++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~----~---~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL----A---DLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh----h---heeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            58999999999999999999997 688888754321 1 1111    1   123556777765 22232    2478999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|-.
T Consensus        72 h~A~~   76 (314)
T TIGR02197        72 HQGAC   76 (314)
T ss_pred             ECccc
Confidence            98853

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.76  E-value=3.2e-05  Score=61.49  Aligned_cols=35  Identities=43%  Similarity=0.530  Sum_probs=32.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      ++||||+|.||..+++.|+++|++|++++|+.+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   35 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG   35 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence            58999999999999999999999999999987653

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.74  E-value=0.00013  Score=61.15  Aligned_cols=75  Identities=17%  Similarity=0.252  Sum_probs=55.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC-C-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEec
Q 031009           83 VLITGSTKGIGYALAKEFLKAG-D-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G-~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      |+|-|+ |.+|+.+++.|++.+ . +|++.+|+.+++++..+++    ...++.+.++|+.|.+ ...+.+..|++||++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            688999 999999999999987 4 8999999999988776665    2226999999999987 345555679999987


Q ss_pred             cCc
Q 031009          160 VPS  162 (167)
Q Consensus       160 i~~  162 (167)
                      -+.
T Consensus        76 gp~   78 (386)
T PF03435_consen   76 GPF   78 (386)
T ss_dssp             SGG
T ss_pred             ccc
Confidence            553

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.74  E-value=7.1e-05  Score=59.83  Aligned_cols=51  Identities=18%  Similarity=0.163  Sum_probs=40.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ++||||+|.+|+.++++|++.|++|.++.|+.+....         .  .+..+.+|+.|.+
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~--~~~~~~~d~~d~~   52 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------P--NEKHVKFDWLDED   52 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------C--CCccccccCCCHH
Confidence            8999999999999999999999999999998764210         0  2344566777765

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=97.70  E-value=6.6e-05  Score=60.61  Aligned_cols=31  Identities=23%  Similarity=0.358  Sum_probs=26.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ++||||+|.||+.++++|+++|++++++.++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence            7999999999999999999999876655444

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.68  E-value=0.0001  Score=62.40  Aligned_cols=38  Identities=34%  Similarity=0.470  Sum_probs=34.2

Q ss_pred             CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHCCCeEEEEeCCh
Q 031009           77 MLPPYNVLITGS---------------TKG-IGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        77 ~l~gk~vlITGa---------------s~G-IG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +++||+++||||               |+| +|.+++++|..+|++|+++++..
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~  235 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPV  235 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            589999999999               556 99999999999999999988654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.64  E-value=0.00013  Score=60.89  Aligned_cols=65  Identities=18%  Similarity=0.203  Sum_probs=47.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .++.+++||||+|.+|+.++++|.+.+  .+|.+.|..+..... ..+.... ...++.++++|+.|..
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~-~~e~~~~-~~~~v~~~~~D~~~~~   68 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNL-PAELTGF-RSGRVTVILGDLLDAN   68 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccccc-chhhhcc-cCCceeEEecchhhhh
Confidence            356789999999999999999999998  789999987642111 1111111 1236899999999876

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.62  E-value=0.00047  Score=50.18  Aligned_cols=48  Identities=25%  Similarity=0.401  Sum_probs=40.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      .+++++++|+|+ |++|.++++.|.+.| .+|++++|+.+..++..+++.
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            356788999998 899999999999996 789999999888776666553

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.62  E-value=0.00021  Score=60.93  Aligned_cols=49  Identities=33%  Similarity=0.348  Sum_probs=39.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ++++|+++|||+++ +|.++++.|++.|++|++.|++.....+..+++..
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~   50 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE   50 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence            46899999999975 99999999999999999999876444444445543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.58  E-value=0.00066  Score=56.42  Aligned_cols=81  Identities=21%  Similarity=0.250  Sum_probs=58.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh---------------------hHHHHHHHHHHHHhCCceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---------------------ERVDSAVQSLREEFGEQHVW  134 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~  134 (167)
                      .+++++|+|.|+ ||+|..+++.|++.|. ++.++|++.                     .+.+.+.+.+++..+..++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            678889999998 8999999999999995 799998863                     24455556666665555677


Q ss_pred             EEeccCCChhhhhhhccceEEEEe
Q 031009          135 VPPSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       135 ~~~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      .+..|++......+.+..|++|.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~DlVid~  123 (338)
T PRK12475        100 PVVTDVTVEELEELVKEVDLIIDA  123 (338)
T ss_pred             EEeccCCHHHHHHHhcCCCEEEEc
Confidence            777788754433344445666654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.57  E-value=0.00043  Score=57.92  Aligned_cols=79  Identities=23%  Similarity=0.273  Sum_probs=53.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChh---HHHHHHHHHH-----HHhCCceEEEEeccCCChh-------
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE---RVDSAVQSLR-----EEFGEQHVWVPPSRLVSAP-------  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~---~~~~~~~~l~-----~~~~~~~~~~~~~Dv~d~~-------  144 (167)
                      +++++|||+|.+|.-+..+|+..- ++|++..|-.+   ..+++.+.+.     ++....++..+..|++...       
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            469999999999999999999865 69999988543   2222222222     2223348999999998543       


Q ss_pred             hhhhhccceEEEEec
Q 031009          145 YNIIYKYSWLLVNIY  159 (167)
Q Consensus       145 ~~~~~~~~dilvN~a  159 (167)
                      ........|.++|+|
T Consensus        81 ~~~La~~vD~I~H~g   95 (382)
T COG3320          81 WQELAENVDLIIHNA   95 (382)
T ss_pred             HHHHhhhcceEEecc
Confidence            233334478888776

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=97.55  E-value=0.00013  Score=58.48  Aligned_cols=28  Identities=14%  Similarity=0.306  Sum_probs=25.4

Q ss_pred             EEeCCCCchHHHHHHHHHHCCCeEEEEe
Q 031009           84 LITGSTKGIGYALAKEFLKAGDNVIICS  111 (167)
Q Consensus        84 lITGas~GIG~aia~~L~~~G~~Vi~~~  111 (167)
                      +||||+|.||..+++.|++.|++|+++.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~   28 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLR   28 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEee
Confidence            6999999999999999999998877654

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.52  E-value=0.00085  Score=51.71  Aligned_cols=81  Identities=25%  Similarity=0.314  Sum_probs=56.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+..++++|.|. ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++..+..++..+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            678888999987 8999999999999995 79999876                   23455566666665555456666


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ..++.+.......+..|++|.+
T Consensus        97 ~~~i~~~~~~~~~~~~D~Vi~~  118 (202)
T TIGR02356        97 KERVTAENLELLINNVDLVLDC  118 (202)
T ss_pred             hhcCCHHHHHHHHhCCCEEEEC
Confidence            6666544333334445666654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.52  E-value=0.00025  Score=62.20  Aligned_cols=47  Identities=28%  Similarity=0.378  Sum_probs=41.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            577899999999 69999999999999999999999988777665554

>PLN02778 3,5-epimerase/4-reductase

Probab=97.49  E-value=0.00029  Score=57.19  Aligned_cols=45  Identities=27%  Similarity=0.176  Sum_probs=34.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      ++++||||+|.||..++++|+++|++|+....+....+.+...+.
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~   54 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADID   54 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHH
Confidence            579999999999999999999999999866544433343444443

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.49  E-value=0.001  Score=54.00  Aligned_cols=50  Identities=22%  Similarity=0.271  Sum_probs=43.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      .+.+|+++|-|+ ||.|++++..|+..|. +|++++|+.++.+++.+++...
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            467889999998 8999999999999996 7999999999988887777554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.46  E-value=0.0002  Score=57.66  Aligned_cols=36  Identities=39%  Similarity=0.547  Sum_probs=32.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      ++||||+|-||++++.+|.+.|+.|+++.|+..+.+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~   36 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS   36 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence            589999999999999999999999999999986543

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.46  E-value=0.00086  Score=54.44  Aligned_cols=50  Identities=26%  Similarity=0.366  Sum_probs=44.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      +.+|+.++|-|+ ||-+++++..|++.| .+++++.|+.++.+++.+.+...
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            557899999988 999999999999999 57999999999998887777654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=97.44  E-value=0.00019  Score=58.07  Aligned_cols=32  Identities=44%  Similarity=0.586  Sum_probs=29.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      +++|||++|-||.++.+.|.+.|+.|+.++|.
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~   33 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS   33 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch
Confidence            69999999999999999999999999999775

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.42  E-value=0.0005  Score=52.94  Aligned_cols=47  Identities=28%  Similarity=0.438  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      .+++||+++|+|.+ .+|+.+++.|.+.|++|++.|++.+..++..++
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            36899999999994 899999999999999999999998776665443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.35  E-value=0.00078  Score=54.05  Aligned_cols=48  Identities=33%  Similarity=0.491  Sum_probs=41.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.++..+++..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            56789999999 6999999999999999999999999888777776643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.35  E-value=0.0018  Score=48.62  Aligned_cols=43  Identities=21%  Similarity=0.371  Sum_probs=37.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .++.||+++|.|++.-.|..+++.|.++|++|.++.|+.+.+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~   82 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK   82 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence            3799999999999666799999999999999999999875444

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.35  E-value=0.002  Score=53.56  Aligned_cols=81  Identities=22%  Similarity=0.230  Sum_probs=56.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh---------------------hHHHHHHHHHHHHhCCceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---------------------ERVDSAVQSLREEFGEQHVW  134 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~  134 (167)
                      .+..++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                     .+.+.+.+.+++..+..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            577888999999 9999999999999995 899999763                     23334445555554544677


Q ss_pred             EEeccCCChhhhhhhccceEEEEe
Q 031009          135 VPPSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       135 ~~~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      .+..+++......+.+..|++|.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~DlVid~  123 (339)
T PRK07688        100 AIVQDVTAEELEELVTGVDLIIDA  123 (339)
T ss_pred             EEeccCCHHHHHHHHcCCCEEEEc
Confidence            777787654433334445666654

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.34  E-value=0.00029  Score=57.09  Aligned_cols=84  Identities=21%  Similarity=0.188  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH--hCCceEEEEeccCCChh--hhhhhc-cce
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE--FGEQHVWVPPSRLVSAP--YNIIYK-YSW  153 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~d~~--~~~~~~-~~d  153 (167)
                      .+|+++|||-+|--|.-+++.|+++|+.|..+.|.........-.|...  .+..+++++.+|++|..  ...... ..|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            3689999999999999999999999999999988743322110011111  12236889999999976  222222 277


Q ss_pred             EEEEeccCc
Q 031009          154 LLVNIYVPS  162 (167)
Q Consensus       154 ilvN~ai~~  162 (167)
                      -+.|.|..+
T Consensus        81 EIYNLaAQS   89 (345)
T COG1089          81 EIYNLAAQS   89 (345)
T ss_pred             hheeccccc
Confidence            888887554

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.34  E-value=0.0016  Score=54.73  Aligned_cols=82  Identities=24%  Similarity=0.212  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|++                   ..+.+.+.+.+.+..+..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            477888889877 8999999999999995 69999887                   34566666777666554456566


Q ss_pred             eccCCChhhhhhhccceEEEEec
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNIY  159 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~a  159 (167)
                      ...+.+.....+.+..|++|++.
T Consensus       211 ~~~~~~~~~~~~~~~~D~Vv~~~  233 (376)
T PRK08762        211 QERVTSDNVEALLQDVDVVVDGA  233 (376)
T ss_pred             eccCChHHHHHHHhCCCEEEECC
Confidence            55555433333344467777653

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.29  E-value=0.0018  Score=52.55  Aligned_cols=50  Identities=16%  Similarity=0.278  Sum_probs=42.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      .+++|.++|-|+ ||-+++++..|++.|+ +|++++|+.++.+++.+++...
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            466889999998 9999999999999995 6999999999888877776543

>PRK09620 hypothetical protein; Provisional

Probab=97.25  E-value=0.00058  Score=53.78  Aligned_cols=36  Identities=31%  Similarity=0.397  Sum_probs=32.6

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHCCCeEEEEeCC
Q 031009           78 LPPYNVLITGST----------------KGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        78 l~gk~vlITGas----------------~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |.||+++||+|.                |.+|.+++++|+++|++|++++..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            478999999887                999999999999999999988763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.24  E-value=0.0017  Score=48.95  Aligned_cols=85  Identities=26%  Similarity=0.186  Sum_probs=55.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH------HHHHHHhCCceEEEEeccCCChhhhh-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV------QSLREEFGEQHVWVPPSRLVSAPYNI-  147 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~------~~l~~~~~~~~~~~~~~Dv~d~~~~~-  147 (167)
                      ...+.||++.|.|. |.||+++++.+...|++|+.++|.........      .++.+.....++....+-.+++.... 
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li  109 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLI  109 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSB
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceee
Confidence            34789999999988 99999999999999999999999876543110      12222222236777777776643221 


Q ss_pred             ------hhccceEEEEecc
Q 031009          148 ------IYKYSWLLVNIYV  160 (167)
Q Consensus       148 ------~~~~~dilvN~ai  160 (167)
                            ..+..-++||.|=
T Consensus       110 ~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  110 NAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SHHHHHTSTTTEEEEESSS
T ss_pred             eeeeeeccccceEEEeccc
Confidence                  1222668888763

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.22  E-value=0.0036  Score=48.63  Aligned_cols=81  Identities=17%  Similarity=0.206  Sum_probs=56.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh------------------hHHHHHHHHHHHHhCCceEEEEe
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA------------------ERVDSAVQSLREEFGEQHVWVPP  137 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (167)
                      .++.++++|.|+ ||+|..+++.|+..|. ++.++|.+.                  .+.+.+.+.+.+..+..++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            577888999997 9999999999999994 599988762                  24455556666555555666666


Q ss_pred             ccCCChhhhhhhccceEEEEe
Q 031009          138 SRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       138 ~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ..+++..........|++|.+
T Consensus       104 ~~i~~~~~~~~~~~~DvVI~a  124 (212)
T PRK08644        104 EKIDEDNIEELFKDCDIVVEA  124 (212)
T ss_pred             eecCHHHHHHHHcCCCEEEEC
Confidence            666654433344445666654

>PRK08223 hypothetical protein; Validated

Probab=97.19  E-value=0.0033  Score=51.14  Aligned_cols=81  Identities=15%  Similarity=0.130  Sum_probs=58.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .++.++|+|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            577888999988 899999999999999 6688887541                   2455556666666566577777


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...++.+....+.+..|++|+.
T Consensus       103 ~~~l~~~n~~~ll~~~DlVvD~  124 (287)
T PRK08223        103 PEGIGKENADAFLDGVDVYVDG  124 (287)
T ss_pred             ecccCccCHHHHHhCCCEEEEC
Confidence            7777765544444456677653

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.19  E-value=0.0015  Score=54.38  Aligned_cols=79  Identities=16%  Similarity=0.268  Sum_probs=66.1

Q ss_pred             EEEeCCCCchHHHHHHHHHH----CCCeEEEEeCChhHHHHHHHHHHHHhCC--ceEEEEeccCCChh-hhhhhccceEE
Q 031009           83 VLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGE--QHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      ++|-||+|.-|.-+++++..    .|..+.+..|+++++++.++.+....+.  ....++.+|++|++ .....+.-.++
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~vi   87 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARVI   87 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEEE
Confidence            89999999999999999998    7889999999999999999988776544  13347889999988 55666678889


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      +|++-|
T Consensus        88 vN~vGP   93 (423)
T KOG2733|consen   88 VNCVGP   93 (423)
T ss_pred             Eecccc
Confidence            998755

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.18  E-value=0.0047  Score=49.07  Aligned_cols=82  Identities=20%  Similarity=0.201  Sum_probs=56.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .++.++|+|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            578889999998 999999999999999 5688887531                   2445555666666555566667


Q ss_pred             eccCCChhhhhhhccceEEEEec
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNIY  159 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~a  159 (167)
                      ...++......+....|++|.+.
T Consensus       108 ~~~i~~~~~~~~~~~~DiVi~~~  130 (245)
T PRK05690        108 NARLDDDELAALIAGHDLVLDCT  130 (245)
T ss_pred             eccCCHHHHHHHHhcCCEEEecC
Confidence            66665443333344456666543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.15  E-value=0.00049  Score=54.03  Aligned_cols=31  Identities=29%  Similarity=0.428  Sum_probs=26.1

Q ss_pred             EEEEeCC-CCchHHHHHHHHHHCCCeEEEEeC
Q 031009           82 NVLITGS-TKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        82 ~vlITGa-s~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      +=.||.. +||||+++|++|+++|++|+++++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~   47 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTT   47 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence            4455555 678999999999999999999886

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.14  E-value=0.0048  Score=47.57  Aligned_cols=81  Identities=15%  Similarity=0.215  Sum_probs=53.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC---hh---------------HHHHHHHHHHHHhCCceEEEEe
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AE---------------RVDSAVQSLREEFGEQHVWVPP  137 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~---~~---------------~~~~~~~~l~~~~~~~~~~~~~  137 (167)
                      .++.++++|.|+ ||+|..+++.|++.|. +++++|.+   .+               +.+...+.+....+..++..+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            577788999998 8999999999999996 69999876   21               2233344454444444566666


Q ss_pred             ccCCChhhhhhhccceEEEEe
Q 031009          138 SRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       138 ~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      .+++......+....|++|.+
T Consensus        97 ~~i~~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        97 EKITEENIDKFFKDADIVCEA  117 (200)
T ss_pred             eeCCHhHHHHHhcCCCEEEEC
Confidence            666544333333345555554

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.12  E-value=0.0029  Score=60.97  Aligned_cols=83  Identities=13%  Similarity=0.085  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC----CeEEEEeCChhHHHH---HHHHHHHH-----hCCceEEEEeccCCChh--
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDS---AVQSLREE-----FGEQHVWVPPSRLVSAP--  144 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G----~~Vi~~~r~~~~~~~---~~~~l~~~-----~~~~~~~~~~~Dv~d~~--  144 (167)
                      ..++++|||++|.+|..++++|+++|    ++|++..|.......   ....+...     ....++.++.+|+++..  
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35789999999999999999999887    789999987543221   21111110     00125888999998642  


Q ss_pred             -----hhhhhccceEEEEeccC
Q 031009          145 -----YNIIYKYSWLLVNIYVP  161 (167)
Q Consensus       145 -----~~~~~~~~dilvN~ai~  161 (167)
                           ........|+++|+|..
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~ 1071 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGAL 1071 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcE
Confidence                 22223347888888754

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.11  E-value=0.0044  Score=51.81  Aligned_cols=82  Identities=17%  Similarity=0.127  Sum_probs=59.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .++.++|+|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+++..+..++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            578889999988 999999999999999 5688888653                   3556666777776666567777


Q ss_pred             eccCCChhhhhhhccceEEEEec
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNIY  159 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~a  159 (167)
                      ...++......+.+..|++|++.
T Consensus       104 ~~~i~~~~~~~~~~~~DvVvd~~  126 (355)
T PRK05597        104 VRRLTWSNALDELRDADVILDGS  126 (355)
T ss_pred             EeecCHHHHHHHHhCCCEEEECC
Confidence            66776544333444466776653

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.09  E-value=7.7e-05  Score=58.43  Aligned_cols=30  Identities=27%  Similarity=0.447  Sum_probs=24.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCe
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN  106 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~  106 (167)
                      ...+|++++||+|+|||..++..+.+++-.
T Consensus         3 ~~~r~villTGaSrgiG~~~v~~i~aed~e   32 (253)
T KOG1204|consen    3 LNMRKVILLTGASRGIGTGSVATILAEDDE   32 (253)
T ss_pred             cccceEEEEecCCCCccHHHHHHHHhcchH
Confidence            345789999999999999988888877643

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.08  E-value=0.0059  Score=48.35  Aligned_cols=81  Identities=22%  Similarity=0.245  Sum_probs=54.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++++|+|.|+ ||+|..+++.|+..| .+++++|.+.                   .+.+.+.+.+.+..+..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            577888999988 899999999999999 6688887542                   2344555666665555456666


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...++......+.+..|++|.+
T Consensus       100 ~~~i~~~~~~~~~~~~DlVvd~  121 (240)
T TIGR02355       100 NAKLDDAELAALIAEHDIVVDC  121 (240)
T ss_pred             eccCCHHHHHHHhhcCCEEEEc
Confidence            5555443333333445566554

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.08  E-value=0.0014  Score=51.62  Aligned_cols=73  Identities=21%  Similarity=0.211  Sum_probs=45.2

Q ss_pred             EEEEeCCCCc-hHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh---hhhccceEEEE
Q 031009           82 NVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN---IIYKYSWLLVN  157 (167)
Q Consensus        82 ~vlITGas~G-IG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~---~~~~~~dilvN  157 (167)
                      +-.||+.++| +|++++++|+++|++|+++++....     .   .. ....+.++.++..+....   ......|++||
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~-----~---~~-~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh   87 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV-----K---PE-PHPNLSIIEIENVDDLLETLEPLVKDHDVLIH   87 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc-----c---CC-CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEe
Confidence            5678877665 9999999999999999999876421     0   00 011345555443332111   22234688888


Q ss_pred             eccCcc
Q 031009          158 IYVPSC  163 (167)
Q Consensus       158 ~ai~~~  163 (167)
                      +|-...
T Consensus        88 ~AAvsd   93 (229)
T PRK06732         88 SMAVSD   93 (229)
T ss_pred             CCccCC
Confidence            886544

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.06  E-value=0.0051  Score=48.17  Aligned_cols=81  Identities=19%  Similarity=0.211  Sum_probs=55.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+..++|+|.|+ ||+|.++++.|+..| .++.++|.+                   ..+.+.+.+.+++..+..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            577888999987 999999999999999 568887643                   22455566677666555567777


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ..+++...........|++|.+
T Consensus        97 ~~~i~~~~~~~~~~~~DvVi~~  118 (228)
T cd00757          97 NERLDAENAEELIAGYDLVLDC  118 (228)
T ss_pred             cceeCHHHHHHHHhCCCEEEEc
Confidence            6666543333333445666654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=97.01  E-value=0.0014  Score=53.03  Aligned_cols=31  Identities=29%  Similarity=0.447  Sum_probs=27.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ++|||++|-+|.++.+.|. .++.|+.+++.+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~   33 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE   33 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc
Confidence            9999999999999999998 668899988754

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.01  E-value=0.0061  Score=43.66  Aligned_cols=78  Identities=19%  Similarity=0.317  Sum_probs=55.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEEecc
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVPPSR  139 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (167)
                      .++++|-|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+.+..+..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            457899988 9999999999999995 68888743                   12456667777777666688888888


Q ss_pred             CCChhhhhhhccceEEEEe
Q 031009          140 LVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       140 v~d~~~~~~~~~~dilvN~  158 (167)
                      +.+.......+..|++|.+
T Consensus        81 ~~~~~~~~~~~~~d~vi~~   99 (135)
T PF00899_consen   81 IDEENIEELLKDYDIVIDC   99 (135)
T ss_dssp             CSHHHHHHHHHTSSEEEEE
T ss_pred             cccccccccccCCCEEEEe
Confidence            8554444444455666654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.98  E-value=0.01  Score=48.19  Aligned_cols=42  Identities=24%  Similarity=0.376  Sum_probs=37.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      ..+.||+++|.|. |++|+++++.|...|++|++.+|+.++..
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3688999999999 77999999999999999999999987543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.95  E-value=0.01  Score=44.66  Aligned_cols=75  Identities=17%  Similarity=0.202  Sum_probs=50.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh------------------hHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA------------------ERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      ++|.|+ ||+|..+++.|++.|. ++.+.|.+.                  .+.+...+.+++..+..++..+...+.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~   80 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN   80 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence            678886 9999999999999995 599998764                  23444555565555554666666666554


Q ss_pred             hhhhhhccceEEEEe
Q 031009          144 PYNIIYKYSWLLVNI  158 (167)
Q Consensus       144 ~~~~~~~~~dilvN~  158 (167)
                      ....+.+..|++|.+
T Consensus        81 ~~~~~l~~~DlVi~~   95 (174)
T cd01487          81 NLEGLFGDCDIVVEA   95 (174)
T ss_pred             hHHHHhcCCCEEEEC
Confidence            333344446666665

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.92  E-value=0.0084  Score=48.77  Aligned_cols=48  Identities=15%  Similarity=0.195  Sum_probs=38.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChh---HHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~---~~~~~~~~l~  125 (167)
                      .+++|+++|-|+ ||-+++++..|+..|. +|++++|+.+   +.+++.+++.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            468899999998 7779999999999995 7999999854   5555555553

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=96.92  E-value=0.0055  Score=52.87  Aligned_cols=88  Identities=15%  Similarity=0.238  Sum_probs=58.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC---CeEEEEeCChhH------H-----HHHHHHHHHHhCC--ceEEEEeccC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAER------V-----DSAVQSLREEFGE--QHVWVPPSRL  140 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G---~~Vi~~~r~~~~------~-----~~~~~~l~~~~~~--~~~~~~~~Dv  140 (167)
                      .+.+|+++||||+|++|.-+.+.|++--   -+++++-|....      +     +.+-+.+.+..+.  .++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            5789999999999999999999998753   367887775321      1     1122223333222  2677888998


Q ss_pred             CChh-------hhhhhccceEEEEeccCccc
Q 031009          141 VSAP-------YNIIYKYSWLLVNIYVPSCF  164 (167)
Q Consensus       141 ~d~~-------~~~~~~~~dilvN~ai~~~~  164 (167)
                      ++.+       .....+..++++|.|..--|
T Consensus        89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrF  119 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLADEVNIVIHSAATVRF  119 (467)
T ss_pred             cCcccCCChHHHHHHHhcCCEEEEeeeeecc
Confidence            8653       22344558999999866443

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.91  E-value=0.0048  Score=46.00  Aligned_cols=78  Identities=17%  Similarity=0.224  Sum_probs=48.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||+++|.|.+.-+|+.++..|.++|+.|.+++...+.+++..+       ..++.+...-....-.....+..-++|
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~-------~ADIVVsa~G~~~~i~~~~ik~gavVI  105 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR-------RADIVVSAVGKPNLIKADWIKPGAVVI  105 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT-------TSSEEEE-SSSTT-B-GGGS-TTEEEE
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee-------eccEEeeeeccccccccccccCCcEEE
Confidence            6999999999999999999999999999999999887655443222       225666655554443333444455666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       106 DvG~~  110 (160)
T PF02882_consen  106 DVGIN  110 (160)
T ss_dssp             E--CE
T ss_pred             ecCCc
Confidence            66654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.90  E-value=0.003  Score=54.85  Aligned_cols=46  Identities=24%  Similarity=0.399  Sum_probs=39.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      .+++|+++|+|+ ||+|++++..|.+.|++|++.+|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999996 7999999999999999999999998777655443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.89  E-value=0.0084  Score=50.47  Aligned_cols=81  Identities=20%  Similarity=0.244  Sum_probs=56.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+..++|+|.|+ ||+|..+++.|+..| .+++++|.+                   ..+.+.+.+.+.+..+..++..+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            577888999988 899999999999999 579998865                   12455556666665555466666


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...++......+.+..|+++.+
T Consensus       117 ~~~i~~~~~~~~~~~~DlVid~  138 (370)
T PRK05600        117 RERLTAENAVELLNGVDLVLDG  138 (370)
T ss_pred             eeecCHHHHHHHHhCCCEEEEC
Confidence            6666644333344445666654

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.89  E-value=0.008  Score=48.89  Aligned_cols=79  Identities=16%  Similarity=0.177  Sum_probs=52.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.+.-.|+.++..|.++|++|+++.+....+.+.   +    ...++.+...-....-.....+..-++|
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~---~----~~ADIVIsAvg~p~~i~~~~vk~gavVI  227 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASY---L----KDADVIVSAVGKPGLVTKDVVKEGAVII  227 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHH---H----hhCCEEEECCCCCcccCHHHcCCCcEEE
Confidence            69999999999988899999999999999999999865433222   2    1124555444332221112223345777


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.|++.
T Consensus       228 DvGi~~  233 (286)
T PRK14175        228 DVGNTP  233 (286)
T ss_pred             EcCCCc
Confidence            777754

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=96.88  E-value=0.0072  Score=51.39  Aligned_cols=48  Identities=25%  Similarity=0.370  Sum_probs=41.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      ..+.+.+.|+|+||+|+.|+-+++.|.+.|..|.+..|+.++.+....
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            346677789999999999999999999999999999999887765544

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.87  E-value=0.006  Score=49.94  Aligned_cols=79  Identities=11%  Similarity=0.099  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.+.|.|.++-+|+.++..|+++|++|.++++......+..++       .++.+..+--...-.....+..-++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~-------ADIVIsavg~~~~v~~~~ik~GaiV  227 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ-------ADIVVAAVGRPRLIDADWLKPGAVV  227 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc-------CCEEEEecCChhcccHhhccCCcEE
Confidence            378999999999999999999999999999999998766544332221       1444444332222222333445566


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       228 IDvgin  233 (301)
T PRK14194        228 IDVGIN  233 (301)
T ss_pred             EEeccc
Confidence            666655

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=96.87  E-value=0.0059  Score=49.77  Aligned_cols=79  Identities=20%  Similarity=0.164  Sum_probs=60.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      +++|-++-|-||+|.+|+-++.+|++.|..|++-.|..+.--   .+++-.+.-.++.+...|..|++ ...+.+.-.++
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVV  134 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVV  134 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCHHHHHHHHHhCcEE
Confidence            678889999999999999999999999999999888654211   22221111125899999999998 66677777888


Q ss_pred             EEe
Q 031009          156 VNI  158 (167)
Q Consensus       156 vN~  158 (167)
                      ||.
T Consensus       135 INL  137 (391)
T KOG2865|consen  135 INL  137 (391)
T ss_pred             EEe
Confidence            885

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.78  E-value=0.0087  Score=46.91  Aligned_cols=57  Identities=25%  Similarity=0.437  Sum_probs=45.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      |.++|-|+ |-+|+.+|+.|.+.|+.|++++++++..++...+   .   .....+.+|-+++.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~---~~~~~v~gd~t~~~   57 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---E---LDTHVVIGDATDED   57 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---h---cceEEEEecCCCHH
Confidence            35778877 8899999999999999999999999877653221   1   15788899999876

>PRK08328 hypothetical protein; Provisional

Probab=96.72  E-value=0.017  Score=45.38  Aligned_cols=36  Identities=22%  Similarity=0.391  Sum_probs=31.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~  113 (167)
                      .+.+++|+|.|+ ||+|.++++.|+..| .+++++|.+
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            577788999988 899999999999999 568888754

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.67  E-value=0.007  Score=48.99  Aligned_cols=48  Identities=17%  Similarity=0.268  Sum_probs=41.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      .+++|.++|-|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            367889999987 9999999999999995 69999999998887776653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK04148 hypothetical protein; Provisional

Probab=96.66  E-value=0.011  Score=42.76  Aligned_cols=59  Identities=17%  Similarity=0.194  Sum_probs=45.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNI  147 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~  147 (167)
                      +++.+++.|.+  .|.+++..|.+.|++|+++|.+++..+...+    .    .+.++..|+.+.....
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~----~~~~v~dDlf~p~~~~   74 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----L----GLNAFVDDLFNPNLEI   74 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----h----CCeEEECcCCCCCHHH
Confidence            45679999986  7778899999999999999999986544322    1    3678889999876443

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.65  E-value=0.019  Score=46.73  Aligned_cols=79  Identities=18%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.++|.|.+.-.|+.++..|.++|+.|.++......+.+   .++.    .++.+........-.....+..-++
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~---~~~~----ADIvV~AvG~p~~i~~~~vk~GavV  225 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSF---YTQN----ADIVCVGVGKPDLIKASMVKKGAVV  225 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHh----CCEEEEecCCCCcCCHHHcCCCcEE
Confidence            37899999999999999999999999999999998765543332   2211    2455555444333222233334556


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ++.+++
T Consensus       226 IDvGi~  231 (285)
T PRK14191        226 VDIGIN  231 (285)
T ss_pred             EEeecc
Confidence            666653

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.62  E-value=0.018  Score=45.48  Aligned_cols=81  Identities=16%  Similarity=0.188  Sum_probs=54.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+..++++|.|. ||+|.++++.|++.| .+++++|.+.                   .+.+.+.+.+.+..+..++..+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            466778999988 899999999999999 5788887542                   2445556666666555566666


Q ss_pred             eccCCChhh-hhhhccceEEEEe
Q 031009          137 PSRLVSAPY-NIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~-~~~~~~~dilvN~  158 (167)
                      ...++.+.. .......|++|.+
T Consensus        87 ~~~i~~~~~~~l~~~~~D~Vvda  109 (231)
T cd00755          87 EEFLTPDNSEDLLGGDPDFVVDA  109 (231)
T ss_pred             eeecCHhHHHHHhcCCCCEEEEc
Confidence            666654332 2222335666654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.62  E-value=0.02  Score=41.72  Aligned_cols=44  Identities=23%  Similarity=0.312  Sum_probs=38.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+++||.++|.|.+.-.|..++..|.++|++|.+++++...+++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            37899999999999999999999999999999999876544443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.61  E-value=0.03  Score=40.37  Aligned_cols=76  Identities=17%  Similarity=0.246  Sum_probs=50.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      ++|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++..+..++..+..++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            778887 9999999999999995 688887541                   2445556666666555466666666655


Q ss_pred             hhhhhhhccceEEEEec
Q 031009          143 APYNIIYKYSWLLVNIY  159 (167)
Q Consensus       143 ~~~~~~~~~~dilvN~a  159 (167)
                      ..........|++|.+.
T Consensus        81 ~~~~~~~~~~diVi~~~   97 (143)
T cd01483          81 DNLDDFLDGVDLVIDAI   97 (143)
T ss_pred             hhHHHHhcCCCEEEECC
Confidence            43333334456666543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.59  E-value=0.018  Score=48.84  Aligned_cols=81  Identities=21%  Similarity=0.162  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+...+|+|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            467788999988 899999999999999 5688887531                   2444555666665555466666


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...++......+.+..|++|.+
T Consensus       118 ~~~i~~~~~~~~~~~~D~Vvd~  139 (392)
T PRK07878        118 EFRLDPSNAVELFSQYDLILDG  139 (392)
T ss_pred             eccCChhHHHHHHhcCCEEEEC
Confidence            6666654433344445666654

>PRK07411 hypothetical protein; Validated

Probab=96.57  E-value=0.018  Score=48.82  Aligned_cols=81  Identities=23%  Similarity=0.152  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .++..+|+|.|+ ||+|..+++.|+..| .++.++|.+.                   .+.+.+.+.+++..+..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            577888999988 899999999999999 6688887531                   2455566677666666577777


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...++......+....|++|.+
T Consensus       114 ~~~~~~~~~~~~~~~~D~Vvd~  135 (390)
T PRK07411        114 ETRLSSENALDILAPYDVVVDG  135 (390)
T ss_pred             ecccCHHhHHHHHhCCCEEEEC
Confidence            7777764433344445666654

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.52  E-value=0.021  Score=47.36  Aligned_cols=83  Identities=19%  Similarity=0.203  Sum_probs=55.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH---HHHHHHhCCceEEEEeccCCChhhhhhh---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV---QSLREEFGEQHVWVPPSRLVSAPYNIIY---  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~Dv~d~~~~~~~---  149 (167)
                      ..+.|+++.|.|. |.||+++++.|...|++|++++++.+......   ..+.+.....++.+..+-.+......+.   
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~  220 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM  220 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence            3689999999987 88999999999999999999999875432211   1233333333677766666653211111   


Q ss_pred             ----ccceEEEEec
Q 031009          150 ----KYSWLLVNIY  159 (167)
Q Consensus       150 ----~~~dilvN~a  159 (167)
                          +..-++||.+
T Consensus       221 l~~mk~gavlIN~a  234 (330)
T PRK12480        221 FDHVKKGAILVNAA  234 (330)
T ss_pred             HhcCCCCcEEEEcC
Confidence                1256777766

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.51  E-value=0.011  Score=44.99  Aligned_cols=36  Identities=33%  Similarity=0.414  Sum_probs=27.1

Q ss_pred             CCCCEEEEeCC----------------CCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           78 LPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        78 l~gk~vlITGa----------------s~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |+||+++||+|                +|-.|.++|++++..|++|+++...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~   52 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGP   52 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence            56788888876                4669999999999999999998765

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.51  E-value=0.0081  Score=45.90  Aligned_cols=67  Identities=19%  Similarity=0.200  Sum_probs=49.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhccceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYKYSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~~~dilvN~  158 (167)
                      ++.|.|++|-.|..++++...+|+.|..+.|+..+....          ..+...+.|+.|.+. .......|++|++
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~g~DaVIsA   69 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLAGHDAVISA   69 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhcCCceEEEe
Confidence            588999999999999999999999999999998765321          135677888888763 2333335555543

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.50  E-value=0.026  Score=43.41  Aligned_cols=36  Identities=19%  Similarity=0.193  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~  111 (167)
                      ..++||.++|.|.|.=+|+-++..|+++|++|.+++
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~   93 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVD   93 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence            379999999999999999999999999999999995

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK14851 hypothetical protein; Provisional

Probab=96.49  E-value=0.021  Score=51.69  Aligned_cols=82  Identities=11%  Similarity=0.067  Sum_probs=60.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+.+++|+|.|. ||+|..+++.|+..| .++.++|.+                   ..+.+-+.+.+.+..+..++..+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            578889999996 899999999999999 568887743                   12444455666666566678888


Q ss_pred             eccCCChhhhhhhccceEEEEec
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNIY  159 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~a  159 (167)
                      ...++......+.+..|++|++.
T Consensus       119 ~~~i~~~n~~~~l~~~DvVid~~  141 (679)
T PRK14851        119 PAGINADNMDAFLDGVDVVLDGL  141 (679)
T ss_pred             ecCCChHHHHHHHhCCCEEEECC
Confidence            88887655555556677777543

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.48  E-value=0.019  Score=46.74  Aligned_cols=80  Identities=16%  Similarity=0.211  Sum_probs=53.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.++|.|.+.-+|+.++..|.++|++|.++......+.+.   ++    ..++.+...-....-.....+..-++
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~---~~----~ADIVV~avG~~~~i~~~~ik~gavV  226 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAH---TR----QADIVVAAVGKRNVLTADMVKPGATV  226 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHH---hh----hCCEEEEcCCCcCccCHHHcCCCCEE
Confidence            368999999999999999999999999999999987655443322   21    12455544433222222333445577


Q ss_pred             EEeccCc
Q 031009          156 VNIYVPS  162 (167)
Q Consensus       156 vN~ai~~  162 (167)
                      ||.+++-
T Consensus       227 IDVGin~  233 (285)
T PRK14189        227 IDVGMNR  233 (285)
T ss_pred             EEccccc
Confidence            7777654

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.48  E-value=0.034  Score=42.67  Aligned_cols=81  Identities=21%  Similarity=0.264  Sum_probs=52.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh---------------------hHHHHHHHHHHHHhCCceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---------------------ERVDSAVQSLREEFGEQHVW  134 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~  134 (167)
                      .++.++|+|.|+ ||+|.++++.|+..| .++.++|.+.                     .+.+.+.+.+++..+..++.
T Consensus        16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~   94 (198)
T cd01485          16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS   94 (198)
T ss_pred             HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence            466778999988 679999999999999 5588887541                     12334455566665555666


Q ss_pred             EEeccCCC--hhhhhhhccceEEEEe
Q 031009          135 VPPSRLVS--APYNIIYKYSWLLVNI  158 (167)
Q Consensus       135 ~~~~Dv~d--~~~~~~~~~~dilvN~  158 (167)
                      .+..++.+  .....+....|+++.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~dvVi~~  120 (198)
T cd01485          95 IVEEDSLSNDSNIEEYLQKFTLVIAT  120 (198)
T ss_pred             EEecccccchhhHHHHHhCCCEEEEC
Confidence            66666642  2233334445666654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.47  E-value=0.02  Score=46.50  Aligned_cols=78  Identities=17%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .+.||.++|.|.+.-.|+-++..|.++|++|.++.+....+.+...       ..++.+...-.-..-.....+..-++|
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~-------~ADIvi~avG~p~~v~~~~vk~gavVI  228 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVR-------NADLLVVAVGKPGFIPGEWIKPGAIVI  228 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHh-------hCCEEEEcCCCcccccHHHcCCCcEEE
Confidence            6899999999999999999999999999999999876544432221       114444443332222223333345666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.|++
T Consensus       229 DvGin  233 (285)
T PRK10792        229 DVGIN  233 (285)
T ss_pred             Ecccc
Confidence            66654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.45  E-value=0.034  Score=42.65  Aligned_cols=80  Identities=21%  Similarity=0.330  Sum_probs=52.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .++.++|+|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+++..+..++...
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            467778899986 779999999999999 5688887541                   1344556667666565566666


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...+.+... ......|+++.+
T Consensus        97 ~~~~~~~~~-~~~~~~dvVi~~  117 (197)
T cd01492          97 TDDISEKPE-EFFSQFDVVVAT  117 (197)
T ss_pred             ecCccccHH-HHHhCCCEEEEC
Confidence            655653222 233345666654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.44  E-value=0.02  Score=47.47  Aligned_cols=84  Identities=23%  Similarity=0.187  Sum_probs=54.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH-----HHHHHHhCCceEEEEeccCCChhhhhh--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV-----QSLREEFGEQHVWVPPSRLVSAPYNII--  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~~~~--  148 (167)
                      ..+.||++.|.|. |.||+.+++.|...|++|++++|+........     .++.+.....++.+..+-++......+  
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~  224 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINE  224 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCH
Confidence            4789999999998 99999999999999999999998754321100     112222223356666665554322111  


Q ss_pred             -----hccceEEEEecc
Q 031009          149 -----YKYSWLLVNIYV  160 (167)
Q Consensus       149 -----~~~~dilvN~ai  160 (167)
                           .+..-++||.+-
T Consensus       225 ~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        225 ERLKLMKPTAILVNTAR  241 (333)
T ss_pred             HHHhcCCCCeEEEECcC
Confidence                 122567777763

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.42  E-value=0.0082  Score=49.45  Aligned_cols=83  Identities=18%  Similarity=0.119  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhh-------h
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNI-------I  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~-------~  148 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|+..++..........++.+.....++....+-++.+....       .
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~  222 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL  222 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence            3689999999988 9999999999999999999998753211000112222223336777777776543221       1


Q ss_pred             hccceEEEEec
Q 031009          149 YKYSWLLVNIY  159 (167)
Q Consensus       149 ~~~~dilvN~a  159 (167)
                      .+..-++||.|
T Consensus       223 mk~ga~lIN~a  233 (317)
T PRK06487        223 MKPGALLINTA  233 (317)
T ss_pred             CCCCeEEEECC
Confidence            22266888876

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.016  Score=47.32  Aligned_cols=78  Identities=15%  Similarity=0.193  Sum_probs=51.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      .++||+++|.|.++-+|+.++..|+++|+.|.+++ |+.+ ++    ++..   ..++.+..+--...-.....+..-++
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~----e~~~---~ADIVIsavg~~~~v~~~~lk~GavV  226 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LP----AVCR---RADILVAAVGRPEMVKGDWIKPGATV  226 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HH----HHHh---cCCEEEEecCChhhcchheecCCCEE
Confidence            68999999999999999999999999999999995 6542 22    2211   11444444333222122233345677


Q ss_pred             EEeccCc
Q 031009          156 VNIYVPS  162 (167)
Q Consensus       156 vN~ai~~  162 (167)
                      |+.+++.
T Consensus       227 IDvGin~  233 (296)
T PRK14188        227 IDVGINR  233 (296)
T ss_pred             EEcCCcc
Confidence            7777653

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.40  E-value=0.041  Score=43.48  Aligned_cols=75  Identities=17%  Similarity=0.306  Sum_probs=49.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      ++|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+++..+..++..+..++.+
T Consensus         2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            677775 899999999999999 5688887541                   2344445555555555567777777754


Q ss_pred             hh--hhhhhccceEEEEe
Q 031009          143 AP--YNIIYKYSWLLVNI  158 (167)
Q Consensus       143 ~~--~~~~~~~~dilvN~  158 (167)
                      ..  ...+.+..|+++++
T Consensus        81 ~~~~~~~f~~~~DvVi~a   98 (234)
T cd01484          81 EQDFNDTFFEQFHIIVNA   98 (234)
T ss_pred             hhhchHHHHhCCCEEEEC
Confidence            32  23344556777765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.40  E-value=0.031  Score=45.40  Aligned_cols=78  Identities=10%  Similarity=0.181  Sum_probs=51.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      +++||.++|.|.|.-+|+-++..|.++|+.|.+++.....+.+...+       .++.+........-.....+..-++|
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~-------ADIvI~AvG~p~~i~~~~ik~gavVI  227 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQ-------ADILIVAVGKPKLITADMVKEGAVVI  227 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHh-------CCEEEEecCCCCcCCHHHcCCCCEEE
Confidence            68999999999999999999999999999999997655443322211       24555444333322222333345666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       228 DvGi~  232 (284)
T PRK14190        228 DVGVN  232 (284)
T ss_pred             Eeecc
Confidence            66655

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.39  E-value=0.025  Score=46.07  Aligned_cols=79  Identities=13%  Similarity=0.191  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.++|.|.+.=.|+-++..|.++|++|.+++.....+.+...       ..++.+.....-..-.....+..-++
T Consensus       160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~-------~ADIvv~AvG~p~~i~~~~vk~gavV  232 (287)
T PRK14176        160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTL-------DADILVVATGVKHLIKADMVKEGAVI  232 (287)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHh-------hCCEEEEccCCccccCHHHcCCCcEE
Confidence            36899999999999999999999999999999999865544332211       12455544433332222233335566


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       233 IDvGin  238 (287)
T PRK14176        233 FDVGIT  238 (287)
T ss_pred             EEeccc
Confidence            666664

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.39  E-value=0.025  Score=47.56  Aligned_cols=42  Identities=26%  Similarity=0.285  Sum_probs=35.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +.++.++|.|+ |.+|+..++.+...|++|++++++.++++++
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l  206 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQL  206 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            56677899988 7999999999999999999999988765443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.37  E-value=0.024  Score=45.96  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..++||.++|.|.|.-.|+-++..|.++|+.|.++......+.+.   .+    ..++.+........-.....+..-++
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~---~~----~ADIvV~AvGkp~~i~~~~vk~gavv  225 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAH---TK----KADIVIVGVGKPNLITEDMVKEGAIV  225 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHH---Hh----hCCEEEEecCcccccCHHHcCCCcEE
Confidence            378999999999999999999999999999999887554433321   11    12455554443332223333334455


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       226 IDvGin  231 (281)
T PRK14183        226 IDIGIN  231 (281)
T ss_pred             EEeecc
Confidence            555554

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.37  E-value=0.032  Score=45.94  Aligned_cols=76  Identities=18%  Similarity=0.233  Sum_probs=51.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      |+|.|+ ||+|-++++.|+..| .++.++|.+.                   .+.+.+.+.+++..+..++..+..++.+
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            788887 999999999999999 5688887431                   2344455566555555567777777776


Q ss_pred             hh-hhhhhccceEEEEec
Q 031009          143 AP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus       143 ~~-~~~~~~~~dilvN~a  159 (167)
                      .. ...+.+..|++|++.
T Consensus        81 ~~~~~~f~~~~DvVv~a~   98 (312)
T cd01489          81 PDFNVEFFKQFDLVFNAL   98 (312)
T ss_pred             ccchHHHHhcCCEEEECC
Confidence            32 234444566777653

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.027  Score=45.81  Aligned_cols=79  Identities=13%  Similarity=0.106  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.++|.|.|.-+|+-++..|.++|+.|.+++.....+.+..+       ..++.+..+-....-.....+..-++
T Consensus       155 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~-------~ADIvIsAvGk~~~i~~~~ik~gavV  227 (284)
T PRK14177        155 IDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVR-------QADIIVGAVGKPEFIKADWISEGAVL  227 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh-------hCCEEEEeCCCcCccCHHHcCCCCEE
Confidence            37999999999999999999999999999999999865544432221       11455544444333233334445566


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       228 IDvGin  233 (284)
T PRK14177        228 LDAGYN  233 (284)
T ss_pred             EEecCc
Confidence            666665

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.33  E-value=0.012  Score=43.96  Aligned_cols=42  Identities=21%  Similarity=0.282  Sum_probs=32.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .++.||+++|.|. |-+|+.+|+.|...|++|++++.++-..-
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            3689999999988 89999999999999999999999886543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.31  E-value=0.015  Score=45.06  Aligned_cols=42  Identities=33%  Similarity=0.507  Sum_probs=36.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      ++.|.||+|.+|.+++..|++.|++|++.+|++++.++...+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            488999889999999999999999999999998877665544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.31  E-value=0.037  Score=46.05  Aligned_cols=41  Identities=27%  Similarity=0.369  Sum_probs=35.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|.+ |+|...++.....|++|+.+++++++.+.
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~  205 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLEL  205 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHH
Confidence            468999999997 99998888777799999999999987653

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.029  Score=45.56  Aligned_cols=78  Identities=12%  Similarity=0.168  Sum_probs=53.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.|.-.|+-++..|.++|++|.++......+.+..+       ..++.+..+-....-.....+..-++|
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k-------~ADIvIsAvGkp~~i~~~~vk~gavVI  227 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTT-------KADILIVAVGKPNFITADMVKEGAVVI  227 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhh-------hcCEEEEccCCcCcCCHHHcCCCcEEE
Confidence            6899999999999999999999999999999999875544433211       124555554444332333334455666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       228 DvGin  232 (282)
T PRK14180        228 DVGIN  232 (282)
T ss_pred             Eeccc
Confidence            66654

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.028  Score=45.72  Aligned_cols=79  Identities=14%  Similarity=0.173  Sum_probs=53.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.|.-+|+-++..|.++|+.|.++......+++...+       .++.+...-....-.....+..-++|
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~-------ADIvIsAvGkp~~i~~~~vk~GavVI  224 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRR-------ADVLVVAVGRPHLITPEMVRPGAVVV  224 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh-------CCEEEEecCCcCccCHHHcCCCCEEE
Confidence            68999999999999999999999999999999988765444322211       24555554443332333334455666


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.+++.
T Consensus       225 DVGin~  230 (287)
T PRK14173        225 DVGINR  230 (287)
T ss_pred             EccCcc
Confidence            666653

>PRK06849 hypothetical protein; Provisional

Probab=96.30  E-value=0.014  Score=48.99  Aligned_cols=37  Identities=32%  Similarity=0.406  Sum_probs=33.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +.|+|+|||++.++|+.+++.|.++|++|++++.++.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            4578999999999999999999999999999988754

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.30  E-value=0.049  Score=43.95  Aligned_cols=36  Identities=14%  Similarity=0.362  Sum_probs=31.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS  113 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~  113 (167)
                      .+.++.|+|.|+ ||+|.++++.|++.| .++.++|.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            577888999988 899999999999999 779998754

>PLN02928 oxidoreductase family protein

Probab=96.30  E-value=0.018  Score=48.07  Aligned_cols=38  Identities=32%  Similarity=0.314  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ..+.||++.|.|. |.||+++++.|...|++|+.++|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            3689999999998 9999999999999999999999863

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.28  E-value=0.018  Score=43.55  Aligned_cols=43  Identities=28%  Similarity=0.477  Sum_probs=34.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      +|.|-|+ |-+|..++..++..|++|.+.|++++.+++..+.++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            3678888 999999999999999999999999988766555544

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.26  E-value=0.031  Score=45.31  Aligned_cols=79  Identities=14%  Similarity=0.197  Sum_probs=52.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.|.-.|+-++..|.++|++|.+++.....+.+...+       .++.+..+-....-.....+..-++|
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~-------ADIvIsAvGkp~~i~~~~ik~gavVI  227 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKK-------ADILVVAIGRPKFIDEEYVKEGAIVI  227 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh-------CCEEEEcCCCcCccCHHHcCCCcEEE
Confidence            78999999999999999999999999999999998655444332221       14555444443332333333445566


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.+++.
T Consensus       228 DvGin~  233 (278)
T PRK14172        228 DVGTSS  233 (278)
T ss_pred             Eeeccc
Confidence            665543

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.26  E-value=0.03  Score=45.79  Aligned_cols=79  Identities=15%  Similarity=0.158  Sum_probs=53.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.|.-+|+-++..|.++|++|.++......+++...+       .++.+..+-....-.....+..-++|
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~-------ADIvIsAvGkp~~i~~~~ik~gavVI  227 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITRE-------ADILVAAAGRPNLIGAEMVKPGAVVV  227 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh-------CCEEEEccCCcCccCHHHcCCCCEEE
Confidence            68999999999999999999999999999999997655444332221       24555554444332333334445666


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.+++.
T Consensus       228 DvGin~  233 (297)
T PRK14186        228 DVGIHR  233 (297)
T ss_pred             Eecccc
Confidence            666653

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.25  E-value=0.032  Score=45.32  Aligned_cols=79  Identities=14%  Similarity=0.145  Sum_probs=53.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.|.-+|+-++..|.++|++|.++......+.+...       ..++.+..+-....-.....+..-++|
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~-------~ADIvI~AvG~p~~i~~~~vk~GavVI  225 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTK-------EADILVVAVGVPHFIGADAVKPGAVVI  225 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHh-------hCCEEEEccCCcCccCHHHcCCCcEEE
Confidence            6899999999999999999999999999999998755443332211       124555554444333333344445666


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.+++.
T Consensus       226 DvGin~  231 (282)
T PRK14169        226 DVGISR  231 (282)
T ss_pred             Eeeccc
Confidence            666654

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.25  E-value=0.018  Score=47.37  Aligned_cols=84  Identities=19%  Similarity=0.134  Sum_probs=55.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH---HHH--HHHHHHHhCCceEEEEeccCCChhhhhhh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV---DSA--VQSLREEFGEQHVWVPPSRLVSAPYNIIY  149 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~---~~~--~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~  149 (167)
                      ...+.||++.|-|. |.||+++++.|...|++|+.+++..+..   +..  ..++.+.....++....+-.++.....+.
T Consensus       131 ~~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~  209 (312)
T PRK15469        131 EYHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIIN  209 (312)
T ss_pred             CCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhH
Confidence            34688999999987 8999999999999999999999865421   110  12233333334677777766655422221


Q ss_pred             -------ccceEEEEec
Q 031009          150 -------KYSWLLVNIY  159 (167)
Q Consensus       150 -------~~~dilvN~a  159 (167)
                             +..-++||.|
T Consensus       210 ~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        210 QQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             HHHHhcCCCCcEEEECC
Confidence                   1256788876

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.24  E-value=0.066  Score=36.31  Aligned_cols=76  Identities=17%  Similarity=0.158  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH--CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~--~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      ++++++--|++.|   .++..|++  .|++|+.++.+++.++...+.........++.++..|+ .........++-++.
T Consensus         1 p~~~vLDlGcG~G---~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~   76 (112)
T PF12847_consen    1 PGGRVLDLGCGTG---RLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVIC   76 (112)
T ss_dssp             TTCEEEEETTTTS---HHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEE
T ss_pred             CCCEEEEEcCcCC---HHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEE
Confidence            4667888888766   33444555  78999999999988887766664443444799999999 323333333444444


Q ss_pred             Ee
Q 031009          157 NI  158 (167)
Q Consensus       157 N~  158 (167)
                      +.
T Consensus        77 ~~   78 (112)
T PF12847_consen   77 SG   78 (112)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

...

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.24  E-value=0.015  Score=48.05  Aligned_cols=40  Identities=28%  Similarity=0.452  Sum_probs=33.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .|+++||+||+||+|....+-....|+.+++...+.++.+
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~  181 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE  181 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence            3899999999999999998888888977777766665544

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.23  E-value=0.0081  Score=39.16  Aligned_cols=35  Identities=29%  Similarity=0.292  Sum_probs=22.9

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHH-HCCCeEEEEeCC
Q 031009           79 PP-YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRS  113 (167)
Q Consensus        79 ~g-k~vlITGas~GIG~aia~~L~-~~G~~Vi~~~r~  113 (167)
                      +| |++||+|+|.|.|++....++ ..|++.+.+...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            44 889999999999999444444 667887776653

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.21  E-value=0.024  Score=46.66  Aligned_cols=48  Identities=17%  Similarity=0.344  Sum_probs=41.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      .++++.|+|+ |++|..++..|+..|.  .++++|++++.++....++...
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~   54 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA   54 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence            4568999998 9999999999999984  6999999998888777777654

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.18  E-value=0.015  Score=47.73  Aligned_cols=83  Identities=22%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH--HHHHHHHHhCCceEEEEeccCCChhhhh------
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVWVPPSRLVSAPYNI------  147 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~d~~~~~------  147 (167)
                      ..+.||++.|.|- |.||+++|+.+...|.+|+..++.....+.  ....+.+.....++..+.+-++++....      
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~  219 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL  219 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence            4799999999988 999999999999999999999985321110  0112222223346777777777654222      


Q ss_pred             -hhccceEEEEec
Q 031009          148 -IYKYSWLLVNIY  159 (167)
Q Consensus       148 -~~~~~dilvN~a  159 (167)
                       ..+-.-++||.|
T Consensus       220 ~~Mk~~a~lIN~a  232 (311)
T PRK08410        220 KLLKDGAILINVG  232 (311)
T ss_pred             HhCCCCeEEEECC
Confidence             122267888876

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.16  E-value=0.044  Score=44.53  Aligned_cols=40  Identities=23%  Similarity=0.371  Sum_probs=35.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      ..++||.++|.|+++-.|+.++..|.++|++|.++.+...
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            4789999999999777999999999999999999998543

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.16  E-value=0.048  Score=47.05  Aligned_cols=49  Identities=20%  Similarity=0.302  Sum_probs=37.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~  126 (167)
                      .+++|.++|.|+ |++|.++|+.|.++|++|.++++.+. ......+.+++
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            467889999997 88999999999999999999996553 23333344543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.16  E-value=0.04  Score=37.95  Aligned_cols=53  Identities=34%  Similarity=0.486  Sum_probs=39.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..++.    ... +   +.++.+|.++.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~----~~~-~---~~~i~gd~~~~~   53 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL----REE-G---VEVIYGDATDPE   53 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHT-T---SEEEES-TTSHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH----Hhc-c---cccccccchhhh
Confidence            467777 6899999999999777999999998775443    222 2   567889999876

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.13  E-value=0.037  Score=45.20  Aligned_cols=79  Identities=10%  Similarity=0.112  Sum_probs=53.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.++|.|.|.=+|+-++..|.++|++|.++......+.+...+       .++.+...-....-.....+..-++
T Consensus       156 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~-------ADIvVsAvGkp~~i~~~~ik~gaiV  228 (294)
T PRK14187        156 RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSK-------ADILVAAVGIPNFVKYSWIKKGAIV  228 (294)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhh-------CCEEEEccCCcCccCHHHcCCCCEE
Confidence            369999999999999999999999999999999998765444322211       1455554444333233333444566


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       229 IDVGin  234 (294)
T PRK14187        229 IDVGIN  234 (294)
T ss_pred             EEeccc
Confidence            666654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.12  E-value=0.098  Score=42.66  Aligned_cols=40  Identities=28%  Similarity=0.413  Sum_probs=36.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .+.+++++|.|. |++|+.++..|...|++|++++|+.++.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            567999999998 7799999999999999999999997654

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.12  E-value=0.04  Score=44.77  Aligned_cols=79  Identities=11%  Similarity=0.177  Sum_probs=53.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.++|.|.|.=+|+-++..|.++|+.|.++......+.+...+       .++.+..+-....-.....+..-++
T Consensus       153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~-------ADIvI~AvG~~~~i~~~~vk~GavV  225 (284)
T PRK14170        153 TQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKE-------ADILVVATGLAKFVKKDYIKPGAIV  225 (284)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh-------CCEEEEecCCcCccCHHHcCCCCEE
Confidence            379999999999999999999999999999999987655443322211       1455554444333222333334566


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       226 IDvGin  231 (284)
T PRK14170        226 IDVGMD  231 (284)
T ss_pred             EEccCc
Confidence            666665

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.12  E-value=0.061  Score=39.04  Aligned_cols=46  Identities=20%  Similarity=0.414  Sum_probs=39.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      ++.|.|++|.+|..++..|...+  .+++++|++++.++....++...
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~   49 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHA   49 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhh
Confidence            58899999999999999999987  56999999988887777777653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.11  E-value=0.064  Score=43.78  Aligned_cols=74  Identities=15%  Similarity=0.268  Sum_probs=50.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      |+|.|+ ||+|-++++.|+..| .++.++|.+                   ..+.+.+.+.+++..+..++..+..++.+
T Consensus         2 VlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            677876 899999999999999 568887743                   12344455556555555577777778876


Q ss_pred             hhhhhhhccceEEEEe
Q 031009          143 APYNIIYKYSWLLVNI  158 (167)
Q Consensus       143 ~~~~~~~~~~dilvN~  158 (167)
                      .. ..+.+..|+++++
T Consensus        81 ~~-~~f~~~fdvVi~a   95 (291)
T cd01488          81 KD-EEFYRQFNIIICG   95 (291)
T ss_pred             hh-HHHhcCCCEEEEC
Confidence            43 3344456666664

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.11  E-value=0.033  Score=45.25  Aligned_cols=37  Identities=16%  Similarity=0.277  Sum_probs=34.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      .+.||.++|.|.|+-+|+.++..|+++|++|.++...
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~  191 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSR  191 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCC
Confidence            6899999999999999999999999999999998543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.09  E-value=0.019  Score=46.95  Aligned_cols=43  Identities=19%  Similarity=0.189  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|++|++|..+++.....|++|+.+++++++.+.+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~  192 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL  192 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4688999999999999999988888899999988887665443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=96.07  E-value=0.035  Score=46.48  Aligned_cols=79  Identities=8%  Similarity=0.104  Sum_probs=54.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.+.=+|+-++..|.++|+.|.++......+++..++       .++.+...-....-.....+..-++|
T Consensus       228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~-------ADIVIsAvGkp~~i~~d~vK~GAvVI  300 (364)
T PLN02616        228 EIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITRE-------ADIIISAVGQPNMVRGSWIKPGAVVI  300 (364)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhh-------CCEEEEcCCCcCcCCHHHcCCCCEEE
Confidence            68999999999999999999999999999999998665444332221       24555554444333333444455667


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.+++-
T Consensus       301 DVGIn~  306 (364)
T PLN02616        301 DVGINP  306 (364)
T ss_pred             eccccc
Confidence            766653

>PLN02494 adenosylhomocysteinase

Probab=96.06  E-value=0.063  Score=46.60  Aligned_cols=39  Identities=23%  Similarity=0.267  Sum_probs=35.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+
T Consensus       251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            478999999998 699999999999999999999988754

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.05  E-value=0.043  Score=44.70  Aligned_cols=79  Identities=18%  Similarity=0.232  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.|.=+|+-++..|.++|+.|.++......+.+...       ..++.+...-....-.....+..-++|
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~-------~ADIvV~AvGkp~~i~~~~vk~GavVI  228 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITS-------KADIVVAAIGSPLKLTAEYFNPESIVI  228 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh-------hCCEEEEccCCCCccCHHHcCCCCEEE
Confidence            6899999999999999999999999999999998865444332211       124555544433322233333345666


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.+++.
T Consensus       229 DvGin~  234 (288)
T PRK14171        229 DVGINR  234 (288)
T ss_pred             Eeeccc
Confidence            666553

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.03  E-value=0.042  Score=46.84  Aligned_cols=55  Identities=20%  Similarity=0.353  Sum_probs=42.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .++|.|+ |.+|+.+++.|.++|+.|++++++++..++..+    ..   .+.++.+|.++..
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----~~---~~~~~~gd~~~~~   56 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----RL---DVRTVVGNGSSPD   56 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----hc---CEEEEEeCCCCHH
Confidence            5788887 999999999999999999999998876554322    11   3566667777654

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.02  E-value=0.048  Score=44.30  Aligned_cols=78  Identities=17%  Similarity=0.258  Sum_probs=52.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.|.-.|+-++..|.++|+.|.++......+++...+       .++.+...-....-.....+..-++|
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~-------ADIvIsAvGkp~~i~~~~vk~GavVI  226 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQ-------ADLIIVAAGCVNLLRSDMVKEGVIVV  226 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh-------CCEEEEcCCCcCccCHHHcCCCCEEE
Confidence            68999999999999999999999999999999988765444322211       14554444333322233333345566


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       227 DvGin  231 (282)
T PRK14166        227 DVGIN  231 (282)
T ss_pred             Eeccc
Confidence            66654

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.02  E-value=0.02  Score=46.65  Aligned_cols=41  Identities=15%  Similarity=0.107  Sum_probs=34.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~  120 (167)
                      |++++|+|+++++|...++.....|+ +|+.+++++++.+.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~  196 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLL  196 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            37999999999999999888778898 799998887765443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK14852 hypothetical protein; Provisional

Probab=96.00  E-value=0.049  Score=51.05  Aligned_cols=81  Identities=17%  Similarity=0.133  Sum_probs=59.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .|..++|+|.|. ||+|..+++.|+..| .++.++|.+                   ..+.+.+.+.+.+..+..++..+
T Consensus       329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            578888999997 899999999999999 568887643                   12455556666666566677888


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...++......+.+..|++|++
T Consensus       408 ~~~I~~en~~~fl~~~DiVVDa  429 (989)
T PRK14852        408 PEGVAAETIDAFLKDVDLLVDG  429 (989)
T ss_pred             ecCCCHHHHHHHhhCCCEEEEC
Confidence            7788665555555667777753

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.98  E-value=0.023  Score=48.59  Aligned_cols=47  Identities=19%  Similarity=0.359  Sum_probs=40.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .+++|+++|.|+ ||+|+.+++.|...| .+++++.|+.++.+++.+++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            588999999998 999999999999999 46999999988776665554

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.97  E-value=0.024  Score=46.02  Aligned_cols=42  Identities=17%  Similarity=0.178  Sum_probs=35.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|.+++|+|+++++|...++.....|++|+.+++++++.+.
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~  178 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY  178 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            357899999999999999988888889999999888766443

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.96  E-value=0.037  Score=45.82  Aligned_cols=84  Identities=26%  Similarity=0.209  Sum_probs=56.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHH-----HHHHHHHHhCCceEEEEeccCCChhhhh-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDS-----AVQSLREEFGEQHVWVPPSRLVSAPYNI-  147 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~-----~~~~l~~~~~~~~~~~~~~Dv~d~~~~~-  147 (167)
                      ...+.||++.|.|. |.||+.+++.+...|.+|+.+|+ .......     ....|.......++....+=++++.... 
T Consensus       137 g~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i  215 (324)
T COG0111         137 GTELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLI  215 (324)
T ss_pred             cccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhccc
Confidence            34788999999988 89999999999999999999998 3222111     0122333233347777777777654211 


Q ss_pred             ------hhccceEEEEec
Q 031009          148 ------IYKYSWLLVNIY  159 (167)
Q Consensus       148 ------~~~~~dilvN~a  159 (167)
                            ..+..-++||.|
T Consensus       216 ~~~~~a~MK~gailIN~a  233 (324)
T COG0111         216 NAEELAKMKPGAILINAA  233 (324)
T ss_pred             CHHHHhhCCCCeEEEECC
Confidence                  122245888887

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.96  E-value=0.053  Score=44.03  Aligned_cols=79  Identities=13%  Similarity=0.115  Sum_probs=53.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..++||.++|.|.|.=+|+-++..|.++|+.|.++......+++..+       ..++.+...-....-.....+..-++
T Consensus       153 i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~-------~ADIvI~AvGk~~~i~~~~ik~gaiV  225 (282)
T PRK14182        153 VDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVG-------RADILVAAIGKAELVKGAWVKEGAVV  225 (282)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHh-------hCCEEEEecCCcCccCHHHcCCCCEE
Confidence            36899999999999999999999999999999999876544432221       12455555444333233333444556


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       226 IDvGin  231 (282)
T PRK14182        226 IDVGMN  231 (282)
T ss_pred             EEeece
Confidence            666654

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.95  E-value=0.036  Score=44.76  Aligned_cols=43  Identities=23%  Similarity=0.362  Sum_probs=36.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      -+++.|.|+ |.+|..++..|+.+|++|++++++++.++...++
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT   46 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence            356778877 8999999999999999999999998877665443

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.93  E-value=0.024  Score=46.93  Aligned_cols=42  Identities=17%  Similarity=0.198  Sum_probs=35.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|.+++|+|++|++|...++.....|++|+.+++++++.+.
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~  198 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL  198 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            458899999999999999998888889999998888766543

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=95.91  E-value=0.053  Score=44.39  Aligned_cols=80  Identities=11%  Similarity=0.120  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..+.||.++|.|.|.=+|+-++..|.++|++|.++......+++...+       .++.+........-.....+..-++
T Consensus       163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~-------ADIvv~AvGk~~~i~~~~vk~gavV  235 (299)
T PLN02516        163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVRE-------ADIVIAAAGQAMMIKGDWIKPGAAV  235 (299)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhh-------CCEEEEcCCCcCccCHHHcCCCCEE
Confidence            379999999999999999999999999999999998655443322211       1455544433222223333334566


Q ss_pred             EEeccCc
Q 031009          156 VNIYVPS  162 (167)
Q Consensus       156 vN~ai~~  162 (167)
                      |+.+++.
T Consensus       236 IDvGin~  242 (299)
T PLN02516        236 IDVGTNA  242 (299)
T ss_pred             EEeeccc
Confidence            6666553

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.90  E-value=0.022  Score=42.24  Aligned_cols=43  Identities=33%  Similarity=0.451  Sum_probs=35.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      |+.+|+.+-+|+++|..|+++|.+|+++  +++..+.+..++..+
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~   43 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEE   43 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHH
Confidence            5789999999999999999999999998  566666666666443

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.88  E-value=0.022  Score=46.86  Aligned_cols=83  Identities=14%  Similarity=0.158  Sum_probs=54.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH-HHHHHHHHHHhCCceEEEEeccCCChhhhhh------
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEFGEQHVWVPPSRLVSAPYNII------  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~------  148 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|+..++..... ......+.+.....++..+.+-++......+      
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~  221 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA  221 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence            4789999999988 9999999999999999999988754211 0001122222223367777777765542211      


Q ss_pred             -hccceEEEEec
Q 031009          149 -YKYSWLLVNIY  159 (167)
Q Consensus       149 -~~~~dilvN~a  159 (167)
                       .+-.-++||.|
T Consensus       222 ~mk~ga~lIN~a  233 (314)
T PRK06932        222 LMKPTAFLINTG  233 (314)
T ss_pred             hCCCCeEEEECC
Confidence             12256788876

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=95.88  E-value=0.05  Score=45.34  Aligned_cols=78  Identities=6%  Similarity=0.116  Sum_probs=53.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|-|.=+|+-++..|.++|+.|.++......+++..+       ..++.+..+..-..-.....+..-++|
T Consensus       211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~-------~ADIvIsAvGkp~~v~~d~vk~GavVI  283 (345)
T PLN02897        211 EIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITR-------KADIVIAAAGIPNLVRGSWLKPGAVVI  283 (345)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHh-------hCCEEEEccCCcCccCHHHcCCCCEEE
Confidence            6899999999999999999999999999999998865544432211       124555554444333333334445666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       284 DVGin  288 (345)
T PLN02897        284 DVGTT  288 (345)
T ss_pred             Ecccc
Confidence            66665

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.88  E-value=0.029  Score=44.51  Aligned_cols=42  Identities=29%  Similarity=0.287  Sum_probs=36.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+|++++|+|+++++|.++++.+...|++|++++++++..+.
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  184 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL  184 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            368899999999999999999999999999999988765543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.88  E-value=0.025  Score=45.63  Aligned_cols=44  Identities=23%  Similarity=0.266  Sum_probs=37.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l  124 (167)
                      +|.++|-|+ ||-+++++..|.+.|+ +|++++|+.++.+++.+++
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467899987 9999999999999996 5999999998877665543

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=95.87  E-value=0.029  Score=44.43  Aligned_cols=42  Identities=29%  Similarity=0.379  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+++.++|+|+++++|+.+++.+...|++|++++++.+..+.
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~  179 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEA  179 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            467899999999999999999999999999999988765543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.85  E-value=0.009  Score=46.64  Aligned_cols=53  Identities=19%  Similarity=0.001  Sum_probs=37.6

Q ss_pred             HHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc---cceEEEEeccC
Q 031009           96 LAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK---YSWLLVNIYVP  161 (167)
Q Consensus        96 ia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~---~~dilvN~ai~  161 (167)
                      ++++|+++|++|++++|+.+..+     +        ..++++|++|.+ ...+ .+   .+|++||||-.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~   58 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGV   58 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCC
Confidence            47899999999999999876531     1        235789999876 2222 22   37899998843

>PLN03139 formate dehydrogenase; Provisional

Probab=95.85  E-value=0.056  Score=45.85  Aligned_cols=84  Identities=19%  Similarity=0.107  Sum_probs=53.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH---HHH----HHHHHHHhCCceEEEEeccCCChhhhh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV---DSA----VQSLREEFGEQHVWVPPSRLVSAPYNI  147 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~---~~~----~~~l~~~~~~~~~~~~~~Dv~d~~~~~  147 (167)
                      ..++.||++.|.|. |.||+.+++.|...|++|+.+++.....   ++.    ..++.+.....++....+-.+......
T Consensus       194 ~~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~l  272 (386)
T PLN03139        194 AYDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGM  272 (386)
T ss_pred             CcCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHH
Confidence            35799999999996 8899999999999999999999864211   110    112333223335666666555443222


Q ss_pred             hh-------ccceEEEEec
Q 031009          148 IY-------KYSWLLVNIY  159 (167)
Q Consensus       148 ~~-------~~~dilvN~a  159 (167)
                      +.       +..-++||.+
T Consensus       273 i~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        273 FNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             hCHHHHhhCCCCeEEEECC
Confidence            21       1256788876

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.83  E-value=0.046  Score=46.76  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=33.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +.+|+++|+|.+ |+|.++++.|+++|++|.+.|....
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            568899999985 9999999999999999999997654

>PRK07574 formate dehydrogenase; Provisional

Probab=95.79  E-value=0.044  Score=46.44  Aligned_cols=84  Identities=18%  Similarity=0.058  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH--HH-----HHHHHHHhCCceEEEEeccCCChhhhhh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD--SA-----VQSLREEFGEQHVWVPPSRLVSAPYNII  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~--~~-----~~~l~~~~~~~~~~~~~~Dv~d~~~~~~  148 (167)
                      ..+.||++.|.|. |.||+++++.|...|++|+..+|.....+  +.     ...+.+.....++....+-.+.+....+
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li  266 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF  266 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence            4689999999988 78999999999999999999998752111  00     1122232233366666666655432222


Q ss_pred             h-------ccceEEEEecc
Q 031009          149 Y-------KYSWLLVNIYV  160 (167)
Q Consensus       149 ~-------~~~dilvN~ai  160 (167)
                      .       +..-++||.+-
T Consensus       267 ~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        267 DADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CHHHHhcCCCCcEEEECCC
Confidence            1       22568888763

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.79  E-value=0.032  Score=44.96  Aligned_cols=41  Identities=22%  Similarity=0.333  Sum_probs=35.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -+|.+++|+|+++++|..+++.....|++|+.+++++++.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~  182 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA  182 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            46789999999999999998888889999999888776544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.74  E-value=0.035  Score=44.61  Aligned_cols=41  Identities=29%  Similarity=0.391  Sum_probs=35.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -.+.+++|+|+++++|+++++.+...|++|+++.++++..+
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~  201 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK  201 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            35778999999999999999999999999999988776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PTZ00325 malate dehydrogenase; Provisional

Probab=95.73  E-value=0.026  Score=46.66  Aligned_cols=37  Identities=19%  Similarity=0.305  Sum_probs=31.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRS  113 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~  113 (167)
                      .++++++.|+|++|.+|..++..|+..+  .+++++|++
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~   43 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV   43 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence            4567789999999999999999999666  579999993

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.73  E-value=0.054  Score=43.92  Aligned_cols=43  Identities=19%  Similarity=0.324  Sum_probs=36.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      ++|.|.|+ |-+|..+|..|+..|+.|++.|++++.+++..+.+
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i   48 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI   48 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence            35777777 89999999999999999999999998877655443

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.73  E-value=0.075  Score=43.21  Aligned_cols=79  Identities=11%  Similarity=0.193  Sum_probs=53.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH--CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWL  154 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~--~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~di  154 (167)
                      .+.||.++|.|.|.-+|+-++..|.+  +|+.|.++......+.+..++       .++.+...-....-.....+..-+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~-------ADIvV~AvGkp~~i~~~~ik~Gav  227 (284)
T PRK14193        155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRR-------ADIIVAAAGVAHLVTADMVKPGAA  227 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHh-------CCEEEEecCCcCccCHHHcCCCCE
Confidence            68999999999999999999999998  789999998765444322221       245555544443323333334456


Q ss_pred             EEEeccCc
Q 031009          155 LVNIYVPS  162 (167)
Q Consensus       155 lvN~ai~~  162 (167)
                      +|+.+++.
T Consensus       228 VIDvGin~  235 (284)
T PRK14193        228 VLDVGVSR  235 (284)
T ss_pred             EEEccccc
Confidence            66666653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=95.72  E-value=0.031  Score=50.28  Aligned_cols=30  Identities=37%  Similarity=0.304  Sum_probs=26.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVI  108 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi  108 (167)
                      ..++++|||++|.||+++++.|.++|++|.
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~  408 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYE  408 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence            345799999999999999999999999984

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.71  E-value=0.075  Score=43.26  Aligned_cols=79  Identities=13%  Similarity=0.153  Sum_probs=53.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC----CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYS  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~----G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~  152 (167)
                      .++||.++|.|.|.=+|+-++..|.++    ++.|.++......+++...   .    .++.+..+-....-.....+..
T Consensus       150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~---~----ADIvV~AvG~p~~i~~~~ik~G  222 (287)
T PRK14181        150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILK---T----ADIIIAAIGVPLFIKEEMIAEK  222 (287)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHh---h----CCEEEEccCCcCccCHHHcCCC
Confidence            689999999999999999999999998    7999999865444433221   1    2455555444433333344445


Q ss_pred             eEEEEeccCc
Q 031009          153 WLLVNIYVPS  162 (167)
Q Consensus       153 dilvN~ai~~  162 (167)
                      -++|+.+++.
T Consensus       223 avVIDvGin~  232 (287)
T PRK14181        223 AVIVDVGTSR  232 (287)
T ss_pred             CEEEEecccc
Confidence            5666666653

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.68  E-value=0.06  Score=41.51  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=33.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +++||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            689999999998 9999999999999999999998653

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.64  E-value=0.032  Score=47.97  Aligned_cols=38  Identities=26%  Similarity=0.422  Sum_probs=33.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      ++.|.||.|++|.++++.|.+.|++|++++|+++...+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~   39 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE   39 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence            58899999999999999999999999999998776543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.63  E-value=0.037  Score=47.26  Aligned_cols=45  Identities=27%  Similarity=0.499  Sum_probs=38.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~  122 (167)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..+
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~  222 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK  222 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            588999999997 999999999999999 789999999877655443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.61  E-value=0.043  Score=43.99  Aligned_cols=42  Identities=26%  Similarity=0.384  Sum_probs=36.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      ..++.++|+|+++++|.++++.+...|++|++++++++..+.
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~  206 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER  206 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            467899999999999999999999999999999988766543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02306 hydroxypyruvate reductase

Probab=95.61  E-value=0.055  Score=45.88  Aligned_cols=38  Identities=24%  Similarity=0.215  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHH-HCCCeEEEEeCCh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSA  114 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~-~~G~~Vi~~~r~~  114 (167)
                      ..+.||++.|.|. |.||+++++.+. ..|++|+..++..
T Consensus       161 ~~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~  199 (386)
T PLN02306        161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ  199 (386)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            4689999999988 999999999986 7899999999865

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.60  E-value=0.046  Score=36.39  Aligned_cols=37  Identities=35%  Similarity=0.546  Sum_probs=30.8

Q ss_pred             CCCchHHHHHHHHHHCC---CeEEEE-eCChhHHHHHHHHH
Q 031009           88 STKGIGYALAKEFLKAG---DNVIIC-SRSAERVDSAVQSL  124 (167)
Q Consensus        88 as~GIG~aia~~L~~~G---~~Vi~~-~r~~~~~~~~~~~l  124 (167)
                      |+|.+|.++++.|.+.|   .+|.+. +|++++.++..+++
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            55999999999999999   899965 99998876665543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.58  E-value=0.069  Score=45.49  Aligned_cols=60  Identities=28%  Similarity=0.366  Sum_probs=47.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +..+.++|.|+ |.+|+.+++.|.+.|++|++++++++..++..++    ..  .+.++.+|.++.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~--~~~~i~gd~~~~~  288 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LP--NTLVLHGDGTDQE  288 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CC--CCeEEECCCCCHH
Confidence            45688999999 9999999999999999999999998766543332    11  3566778888765

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.56  E-value=0.11  Score=42.22  Aligned_cols=78  Identities=14%  Similarity=0.253  Sum_probs=52.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|.+.-.|+.++..|..+|++|.++.++...+.+...       ..++.+...-....-.....+..-++|
T Consensus       149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~-------~ADIvI~Avgk~~lv~~~~vk~GavVI  221 (279)
T PRK14178        149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELR-------QADILVSAAGKAGFITPDMVKPGATVI  221 (279)
T ss_pred             CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHh-------hCCEEEECCCcccccCHHHcCCCcEEE
Confidence            6899999999999999999999999999999999987654433222       124555444322211222223345666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.|++
T Consensus       222 DVgi~  226 (279)
T PRK14178        222 DVGIN  226 (279)
T ss_pred             Eeecc
Confidence            66655

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.51  E-value=0.013  Score=40.19  Aligned_cols=37  Identities=27%  Similarity=0.317  Sum_probs=32.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +++||.++|.|+ |.+|..-++.|++.|++|.+++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            588999999999 9999999999999999999999875

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.49  E-value=0.13  Score=46.16  Aligned_cols=70  Identities=23%  Similarity=0.308  Sum_probs=48.4

Q ss_pred             CCCCCCCEEEEeCCC-CchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhC--CceEEEEeccCCChh
Q 031009           75 EPMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFG--EQHVWVPPSRLVSAP  144 (167)
Q Consensus        75 ~~~l~gk~vlITGas-~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~--~~~~~~~~~Dv~d~~  144 (167)
                      .....+|+++|||++ +.||.+++..|+..|++|++...+- ++..+.-+.|-..++  ...+.++..+..+..
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~Sys  464 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYS  464 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchh
Confidence            346788999999998 4699999999999999999876443 222333333433332  225677777777654

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.49  E-value=0.12  Score=40.63  Aligned_cols=36  Identities=25%  Similarity=0.528  Sum_probs=33.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC---eEEEEeCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS  113 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~---~Vi~~~r~  113 (167)
                      .+++++++|-|+ ||.|+++++.|.+.|.   ++++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            578889999999 9999999999999996   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.49  E-value=0.1  Score=43.27  Aligned_cols=85  Identities=24%  Similarity=0.182  Sum_probs=56.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh--HHHHH---HHHHHHHhCCceEEEEeccCCChhhhhh
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSA---VQSLREEFGEQHVWVPPSRLVSAPYNII  148 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~--~~~~~---~~~l~~~~~~~~~~~~~~Dv~d~~~~~~  148 (167)
                      ...++.||++.|-|- |.||+++++.+...|++|+..+|...  ..++.   --++.+.....++..+.|=.+.+....+
T Consensus       140 ~~~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLi  218 (324)
T COG1052         140 LGFDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLI  218 (324)
T ss_pred             cccCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhc
Confidence            345799999999987 99999999999988999999998863  11110   0002222223367777777776542222


Q ss_pred             h-------ccceEEEEec
Q 031009          149 Y-------KYSWLLVNIY  159 (167)
Q Consensus       149 ~-------~~~dilvN~a  159 (167)
                      .       +-.-++||.|
T Consensus       219 n~~~l~~mk~ga~lVNta  236 (324)
T COG1052         219 NAEELAKMKPGAILVNTA  236 (324)
T ss_pred             CHHHHHhCCCCeEEEECC
Confidence            2       2256778866

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=95.48  E-value=0.078  Score=44.08  Aligned_cols=84  Identities=26%  Similarity=0.222  Sum_probs=54.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH------HHHHHhCCceEEEEeccCCChhhhhh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ------SLREEFGEQHVWVPPSRLVSAPYNII  148 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~------~l~~~~~~~~~~~~~~Dv~d~~~~~~  148 (167)
                      ..++.||++.|-|. |+||++++++|-..|..+.-..|.+...++..+      .+.+.....++..+.|-++......+
T Consensus       157 g~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~li  235 (336)
T KOG0069|consen  157 GYDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLI  235 (336)
T ss_pred             cccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHh
Confidence            34789999999998 999999999999999445555564433322211      12222233467788887776543222


Q ss_pred             -------hccceEEEEec
Q 031009          149 -------YKYSWLLVNIY  159 (167)
Q Consensus       149 -------~~~~dilvN~a  159 (167)
                             .+..-++||.|
T Consensus       236 Nk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  236 NKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             hHHHHHhcCCCeEEEecc
Confidence                   22367888876

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.48  E-value=0.08  Score=43.77  Aligned_cols=83  Identities=17%  Similarity=0.105  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHH-HCCCeEEEEeCChhHH--HHH---HHHHHHHhCCceEEEEeccCCChhhhhh-
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAERV--DSA---VQSLREEFGEQHVWVPPSRLVSAPYNII-  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~-~~G~~Vi~~~r~~~~~--~~~---~~~l~~~~~~~~~~~~~~Dv~d~~~~~~-  148 (167)
                      ..+.||++.|.|. |.||+++++.+. ..|.+|+..++.....  .+.   ...+.+.....++....+-++.+....+ 
T Consensus       141 ~~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li~  219 (323)
T PRK15409        141 TDVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLFG  219 (323)
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhccC
Confidence            3799999999988 999999999997 7899999888763211  110   0122222223367777777766532221 


Q ss_pred             ------hccceEEEEec
Q 031009          149 ------YKYSWLLVNIY  159 (167)
Q Consensus       149 ------~~~~dilvN~a  159 (167)
                            .+-.-++||.|
T Consensus       220 ~~~l~~mk~ga~lIN~a  236 (323)
T PRK15409        220 AEQFAKMKSSAIFINAG  236 (323)
T ss_pred             HHHHhcCCCCeEEEECC
Confidence                  12266788876

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.48  E-value=0.047  Score=46.67  Aligned_cols=46  Identities=24%  Similarity=0.417  Sum_probs=39.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~  123 (167)
                      .+.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.+..++...+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999987 9999999999999996 799999998776655444

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.47  E-value=0.098  Score=42.81  Aligned_cols=80  Identities=11%  Similarity=0.124  Sum_probs=54.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHC----CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhcc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKY  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~----G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~  151 (167)
                      ..++||.++|.|.|.-+|+-++..|.++    ++.|.++......+.+..+       ..++.+..+.....-.....+.
T Consensus       157 i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~-------~ADIvVsAvGkp~~i~~~~ik~  229 (297)
T PRK14168        157 VETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQ-------RADILIVAAGVPNLVKPEWIKP  229 (297)
T ss_pred             CCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHh-------hCCEEEEecCCcCccCHHHcCC
Confidence            3789999999999999999999999998    7999998765544332221       1255555554443333334444


Q ss_pred             ceEEEEeccCc
Q 031009          152 SWLLVNIYVPS  162 (167)
Q Consensus       152 ~dilvN~ai~~  162 (167)
                      .-++|+.+++-
T Consensus       230 gavVIDvGin~  240 (297)
T PRK14168        230 GATVIDVGVNR  240 (297)
T ss_pred             CCEEEecCCCc
Confidence            55677776653

>PRK06436 glycerate dehydrogenase; Provisional

Probab=95.47  E-value=0.062  Score=44.06  Aligned_cols=84  Identities=18%  Similarity=0.180  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH--HHHHHHHHHHHhCCceEEEEeccCCChhhhhh-----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWVPPSRLVSAPYNII-----  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~-----  148 (167)
                      ..+.||++.|-|- |.||+++++.+...|++|+.++|+...  ......++.+.....++.+..+-.++.....+     
T Consensus       118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l  196 (303)
T PRK06436        118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML  196 (303)
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence            4799999999988 899999999888889999999986421  11101122222223367776666655432221     


Q ss_pred             --hccceEEEEecc
Q 031009          149 --YKYSWLLVNIYV  160 (167)
Q Consensus       149 --~~~~dilvN~ai  160 (167)
                        .+..-++||.+-
T Consensus       197 ~~mk~ga~lIN~sR  210 (303)
T PRK06436        197 SLFRKGLAIINVAR  210 (303)
T ss_pred             hcCCCCeEEEECCC
Confidence              122567787764

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.47  E-value=0.019  Score=45.99  Aligned_cols=71  Identities=17%  Similarity=0.220  Sum_probs=46.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc-cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK-YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~-~~dilvN~  158 (167)
                      .++|+||++- |+.+++.|.++|++|++..+++...+..    .. .+.   ..+..+..|.+ . ....+ ..+++|++
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~----~~-~g~---~~v~~g~l~~~~l~~~l~~~~i~~VIDA   72 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLY----PI-HQA---LTVHTGALDPQELREFLKRHSIDILVDA   72 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccc----cc-cCC---ceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence            5999999887 9999999999999999999887543221    11 121   12333444443 2 22222 27888887


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      .-|
T Consensus        73 tHP   75 (256)
T TIGR00715        73 THP   75 (256)
T ss_pred             CCH
Confidence            644

This enzyme was found to be a monomer by gel filtration.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.44  E-value=0.049  Score=46.57  Aligned_cols=42  Identities=17%  Similarity=0.216  Sum_probs=37.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+.|++++|.|+ |.||+.+++.+...|++|+++++++.+.+.
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~  240 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ  240 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence            578999999998 789999999999999999999998766543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.43  E-value=0.074  Score=41.11  Aligned_cols=38  Identities=26%  Similarity=0.364  Sum_probs=34.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      .++||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            588999999998 88999999999999999999987543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.42  E-value=0.057  Score=47.66  Aligned_cols=57  Identities=21%  Similarity=0.301  Sum_probs=44.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +++ .++|.|+ |.+|+.++++|.++|++|+++|.++++.++..    +.    ....+.+|.+|++
T Consensus       416 ~~~-hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~----~~----g~~~i~GD~~~~~  472 (558)
T PRK10669        416 ICN-HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR----ER----GIRAVLGNAANEE  472 (558)
T ss_pred             cCC-CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HC----CCeEEEcCCCCHH
Confidence            344 4777777 88999999999999999999999987665442    21    3677888998876

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.40  E-value=0.023  Score=49.10  Aligned_cols=66  Identities=15%  Similarity=0.228  Sum_probs=44.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEEe
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVPP  137 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (167)
                      .++.++||.|+ ||||-++.+-|+..|. +|.++|.+-                   .+..-+.+....-.+..++..+.
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~~l~~yh   88 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNIKLVPYH   88 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCCceEecc
Confidence            34557999988 9999999999999994 588876431                   12221222222223345788899


Q ss_pred             ccCCChh
Q 031009          138 SRLVSAP  144 (167)
Q Consensus       138 ~Dv~d~~  144 (167)
                      .++.+..
T Consensus        89 anI~e~~   95 (603)
T KOG2013|consen   89 ANIKEPK   95 (603)
T ss_pred             ccccCcc
Confidence            9999875

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=95.40  E-value=0.024  Score=46.84  Aligned_cols=33  Identities=24%  Similarity=0.312  Sum_probs=29.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-------CeEEEEeCCh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSA  114 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G-------~~Vi~~~r~~  114 (167)
                      +++|||++|.+|..++..|+..+       ..|+++|+++
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            58999999999999999999855       4899999965

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.39  E-value=0.1  Score=42.76  Aligned_cols=78  Identities=9%  Similarity=0.207  Sum_probs=52.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC----CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYS  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~----G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~  152 (167)
                      .++||.++|.|.|.=+|+-++..|.++    ++.|.++......+.+..+       ..++.+..+.....-.....+..
T Consensus       154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~-------~ADIvIsAvGkp~~i~~~~ik~g  226 (297)
T PRK14167        154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTR-------RADIVVAAAGVPELIDGSMLSEG  226 (297)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHh-------hCCEEEEccCCcCccCHHHcCCC
Confidence            689999999999999999999999988    7999998765544332211       12455554444433333333444


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      -++|+.+++
T Consensus       227 aiVIDvGin  235 (297)
T PRK14167        227 ATVIDVGIN  235 (297)
T ss_pred             CEEEEcccc
Confidence            566666654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.38  E-value=0.061  Score=42.88  Aligned_cols=45  Identities=16%  Similarity=0.324  Sum_probs=38.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCC----CeEEEEeCChhHHHHHHHHHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G----~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      +.|.|++|.+|..++..|+..|    .+|++.|++++.++....+++..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~   49 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDA   49 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHh
Confidence            4688998899999999999988    78999999988877777776543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.38  E-value=0.042  Score=47.14  Aligned_cols=40  Identities=18%  Similarity=0.267  Sum_probs=36.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+.
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            578999999998 7999999999999999999999987654

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.36  E-value=0.051  Score=46.38  Aligned_cols=83  Identities=20%  Similarity=0.083  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH---HHHHHHHHHhCCceEEEEeccCCChhhhhh----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD---SAVQSLREEFGEQHVWVPPSRLVSAPYNII----  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~----  148 (167)
                      ..+.||++.|.|. |.||+.+|+.+...|++|+.+++......   ....++.+.....++..+.+-.++.....+    
T Consensus       147 ~~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~~  225 (409)
T PRK11790        147 FEVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAEE  225 (409)
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHHH
Confidence            4799999999988 99999999999999999999998642110   001122222233367777777665432221    


Q ss_pred             ---hccceEEEEec
Q 031009          149 ---YKYSWLLVNIY  159 (167)
Q Consensus       149 ---~~~~dilvN~a  159 (167)
                         .+..-++||.|
T Consensus       226 l~~mk~ga~lIN~a  239 (409)
T PRK11790        226 LALMKPGAILINAS  239 (409)
T ss_pred             HhcCCCCeEEEECC
Confidence               12266888876

>PRK07877 hypothetical protein; Provisional

Probab=95.34  E-value=0.1  Score=47.68  Aligned_cols=81  Identities=15%  Similarity=0.096  Sum_probs=59.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCCh------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .++.++|+|.|. | +|..++..|+..|  .+++++|.+.                  .+.+.+.+.+.+..+..++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            588889999999 4 9999999999999  4788887541                  2455566667666666678888


Q ss_pred             eccCCChhhhhhhccceEEEEec
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNIY  159 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~a  159 (167)
                      ...++......+....|+++++.
T Consensus       182 ~~~i~~~n~~~~l~~~DlVvD~~  204 (722)
T PRK07877        182 TDGLTEDNVDAFLDGLDVVVEEC  204 (722)
T ss_pred             eccCCHHHHHHHhcCCCEEEECC
Confidence            88888655555555567777653

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.30  E-value=0.063  Score=43.80  Aligned_cols=39  Identities=31%  Similarity=0.346  Sum_probs=33.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~  121 (167)
                      ++.|.| .|-+|.+++..|+++|++|++++++++..+...
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~   42 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAP   42 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence            588898 478999999999999999999999987666543

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=95.27  E-value=0.1  Score=42.33  Aligned_cols=42  Identities=26%  Similarity=0.411  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      ++.||.++|.|.|.=.|+-++..|+..+++|.++......+.
T Consensus       153 ~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~  194 (283)
T COG0190         153 DLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLA  194 (283)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHH
Confidence            789999999999999999999999999999999987664443

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.27  E-value=0.061  Score=42.79  Aligned_cols=42  Identities=33%  Similarity=0.452  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .++++++|+|+++++|+++++.+...|++|++++++.++.+.
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~  184 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA  184 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            357899999999999999999999999999999988765543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.25  E-value=0.095  Score=42.37  Aligned_cols=39  Identities=18%  Similarity=0.244  Sum_probs=33.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      |+|.|.|+ |-+|.+++..|+..|++|++.+++++.+++.
T Consensus         5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~   43 (295)
T PLN02545          5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRG   43 (295)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence            56788877 8899999999999999999999998876543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.23  E-value=0.065  Score=43.93  Aligned_cols=46  Identities=26%  Similarity=0.400  Sum_probs=38.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~  123 (167)
                      .+.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++.++..++
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~  221 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE  221 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence            378999999988 999999999999877 6799999998876655444

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.22  E-value=0.058  Score=39.87  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=33.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      +++-+.|. |-+|..+++.|+++|++|++++|++++.++..+
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~   42 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE   42 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence            45777777 899999999999999999999999887766553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.21  E-value=0.13  Score=41.93  Aligned_cols=78  Identities=8%  Similarity=0.141  Sum_probs=52.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC----CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA----GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYS  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~----G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~  152 (167)
                      .++||.++|.|.|.=.|+-++..|.++    ++.|.++......+.+...+       .++.+..+-....-.....+..
T Consensus       154 ~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~-------ADIvIsAvGkp~~i~~~~vk~g  226 (293)
T PRK14185        154 ETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLE-------ADIIIAALGQPEFVKADMVKEG  226 (293)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhh-------CCEEEEccCCcCccCHHHcCCC
Confidence            689999999999999999999999998    68999987655444332221       1455554444433333334444


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      -++|+.+++
T Consensus       227 avVIDvGin  235 (293)
T PRK14185        227 AVVIDVGTT  235 (293)
T ss_pred             CEEEEecCc
Confidence            566666664

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.18  E-value=0.043  Score=40.63  Aligned_cols=35  Identities=29%  Similarity=0.303  Sum_probs=32.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      +++||.++|.|| |-+|...++.|++.|++|.+++.
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            789999999998 88999999999999999998863

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.16  E-value=0.16  Score=41.34  Aligned_cols=42  Identities=17%  Similarity=0.251  Sum_probs=37.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH----CCCeEEEEeCChhHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVD  118 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~----~G~~Vi~~~r~~~~~~  118 (167)
                      .++||.++|.|.|.=.|+-++..|.+    +|++|.++......+.
T Consensus       154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~  199 (286)
T PRK14184        154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLA  199 (286)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHH
Confidence            68999999999999999999999999    8899999987654443

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.14  E-value=0.19  Score=43.23  Aligned_cols=75  Identities=15%  Similarity=0.206  Sum_probs=48.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC------eEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEEe
Q 031009           83 VLITGSTKGIGYALAKEFLKAGD------NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVPP  137 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~------~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (167)
                      ++|.|+ ||+|-++++.|+..|.      ++.++|.+.                   .+.+.+.+.+.+..+..++..+.
T Consensus         2 VlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~   80 (435)
T cd01490           2 VFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ   80 (435)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence            677876 9999999999999997      788887431                   13344445555554555666776


Q ss_pred             ccCCChhh----hhhhccceEEEEe
Q 031009          138 SRLVSAPY----NIIYKYSWLLVNI  158 (167)
Q Consensus       138 ~Dv~d~~~----~~~~~~~dilvN~  158 (167)
                      ..+.....    ..+....|+++|+
T Consensus        81 ~~v~~~~~~~~~~~f~~~~DvVi~a  105 (435)
T cd01490          81 NRVGPETEHIFNDEFWEKLDGVANA  105 (435)
T ss_pred             cccChhhhhhhhHHHhcCCCEEEEC
Confidence            66653222    2233446777765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.14  E-value=0.081  Score=42.74  Aligned_cols=41  Identities=27%  Similarity=0.386  Sum_probs=35.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      +++.|.|+ |-+|..++..|+..|++|++++++++.+++..+
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAME   44 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            46888877 889999999999999999999999988765443

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.14  E-value=0.077  Score=42.80  Aligned_cols=41  Identities=22%  Similarity=0.332  Sum_probs=35.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      ++|.|.|+ |-+|..+|..|++.|++|++++++++.+++..+
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   42 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ   42 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence            46888888 889999999999999999999999988776544

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.12  E-value=0.064  Score=39.45  Aligned_cols=38  Identities=24%  Similarity=0.441  Sum_probs=32.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +|.|-|+ |..|.++|..|+.+|++|.++.|+++..+++
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i   38 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEI   38 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHH
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHH
Confidence            3667777 8899999999999999999999998655443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.11  E-value=0.068  Score=43.66  Aligned_cols=45  Identities=20%  Similarity=0.474  Sum_probs=38.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      ++.|.|+ |++|.+++..|+..|  .+|+++|++++..+....++...
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~   48 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDA   48 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHH
Confidence            5788886 899999999999999  57999999998888777777654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=95.05  E-value=0.096  Score=43.53  Aligned_cols=73  Identities=22%  Similarity=0.310  Sum_probs=57.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEecc
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIYV  160 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~ai  160 (167)
                      -++|-|++|.-|.-++++|+.+|.+-.+..|+.++++.+..+|    +. +...+.+++  +. .........+++|++-
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L----G~-~~~~~p~~~--p~~~~~~~~~~~VVlncvG   80 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL----GP-EAAVFPLGV--PAALEAMASRTQVVLNCVG   80 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc----Cc-cccccCCCC--HHHHHHHHhcceEEEeccc
Confidence            5899999999999999999999999999999999998877766    33 345555555  33 3444445788999875


Q ss_pred             C
Q 031009          161 P  161 (167)
Q Consensus       161 ~  161 (167)
                      |
T Consensus        81 P   81 (382)
T COG3268          81 P   81 (382)
T ss_pred             c
Confidence            5

>PRK14968 putative methyltransferase; Provisional

Probab=95.04  E-value=0.21  Score=36.99  Aligned_cols=63  Identities=24%  Similarity=0.141  Sum_probs=44.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCce-EEEEeccCCCh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH-VWVPPSRLVSA  143 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dv~d~  143 (167)
                      .++++++-.|++.|.   ++..+++.+.+|+.++++++..+...+.+....-..+ +.+..+|..+.
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~   85 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP   85 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc
Confidence            356788888887775   5566666689999999998887776666544322211 77788887664

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.98  E-value=0.11  Score=42.00  Aligned_cols=42  Identities=26%  Similarity=0.276  Sum_probs=35.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      ++|.|.|+ |-+|.+++..|+.+|++|++++++++.+++..+.
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            45777776 8899999999999999999999998876665443

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=94.96  E-value=0.09  Score=41.72  Aligned_cols=41  Identities=27%  Similarity=0.299  Sum_probs=35.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .++++++|+|+++++|.++++.+...|++|+++.++++..+
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            36789999999999999999999999999999988876543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.96  E-value=0.24  Score=40.55  Aligned_cols=79  Identities=11%  Similarity=0.173  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHH----CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhcc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKY  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~  151 (167)
                      ..++||.++|.|.|.=.|+-++..|.+    +|++|.++......+++...+       .++.+..+-....-.....+.
T Consensus       155 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~-------ADIvI~Avg~~~li~~~~vk~  227 (295)
T PRK14174        155 IETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQ-------ADILIAAIGKARFITADMVKP  227 (295)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHh-------CCEEEEecCccCccCHHHcCC
Confidence            368999999999999999999999988    689999998776544332221       145544443322212222233


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .-++|+.+++
T Consensus       228 GavVIDVgi~  237 (295)
T PRK14174        228 GAVVIDVGIN  237 (295)
T ss_pred             CCEEEEeecc
Confidence            4566666655

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=94.90  E-value=0.11  Score=45.30  Aligned_cols=66  Identities=20%  Similarity=0.241  Sum_probs=44.8

Q ss_pred             CCCCCEEEEeCCC----------------CchHHHHHHHHHHCCCeEEEEeCC-----h--------hHHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGST----------------KGIGYALAKEFLKAGDNVIICSRS-----A--------ERVDSAVQSLREE  127 (167)
Q Consensus        77 ~l~gk~vlITGas----------------~GIG~aia~~L~~~G~~Vi~~~r~-----~--------~~~~~~~~~l~~~  127 (167)
                      +|+||+++||+|.                |-.|.++|+++...|++|+++.-.     +        +..+++.+.+.+.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~p~~v~~i~V~ta~eM~~av~~~  332 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLADPQGVKVIHVESARQMLAAVEAA  332 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCCCCCceEEEecCHHHHHHHHHhh
Confidence            5899999999874                459999999999999999987621     1        2244555555444


Q ss_pred             hCCceEEEEeccCCCh
Q 031009          128 FGEQHVWVPPSRLVSA  143 (167)
Q Consensus       128 ~~~~~~~~~~~Dv~d~  143 (167)
                      ... ++.+...-|+|.
T Consensus       333 ~~~-Di~I~aAAVaDy  347 (475)
T PRK13982        333 LPA-DIAIFAAAVADW  347 (475)
T ss_pred             CCC-CEEEEeccccce
Confidence            332 555554444443

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.85  E-value=0.15  Score=43.57  Aligned_cols=48  Identities=27%  Similarity=0.459  Sum_probs=42.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      ++++|+++|.|+ |-+|.-++++|+++| .+|+++.|+.++.+++.+++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            489999999998 779999999999999 779999999999887777664

>PLN00203 glutamyl-tRNA reductase

Probab=94.81  E-value=0.08  Score=46.60  Aligned_cols=47  Identities=26%  Similarity=0.433  Sum_probs=40.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l  124 (167)
                      ++.++.++|.|+ |++|..+++.|...|. +|++++|+.++.+++..++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            388999999999 9999999999999996 6999999988876665543

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=94.70  E-value=0.35  Score=39.42  Aligned_cols=62  Identities=29%  Similarity=0.370  Sum_probs=44.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+...+|+|.|. +|+|.++++.|+..| .++.++|.+.                   .+.+.+.+.|++..+..++..+
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            466778999988 899999999999999 5588887432                   2345555666666555455555


Q ss_pred             ecc
Q 031009          137 PSR  139 (167)
Q Consensus       137 ~~D  139 (167)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.68  E-value=0.086  Score=44.06  Aligned_cols=40  Identities=25%  Similarity=0.339  Sum_probs=30.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      .-+|+.+||.||++|.|.+..+-....|+..++..++.+.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~  194 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK  194 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch
Confidence            3467899999999999999988888888455555545444

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.67  E-value=0.096  Score=45.52  Aligned_cols=40  Identities=18%  Similarity=0.269  Sum_probs=35.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .+.||+++|.|.+ .||+.+++.+...|++|+++++++...
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            6899999999985 699999999999999999998876543

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.61  E-value=0.11  Score=42.54  Aligned_cols=40  Identities=18%  Similarity=0.317  Sum_probs=33.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      .+|++++|+|+ |++|...++.+...|+ +|+++++++++.+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~  208 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLS  208 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHH
Confidence            46889999986 8999999988888897 5888998877654

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.60  E-value=0.11  Score=42.75  Aligned_cols=41  Identities=17%  Similarity=0.270  Sum_probs=35.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|.|+ |++|...++.....|++|+++++++++.+.
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~  205 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM  205 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            45889999999 999999998888899999999988876543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.59  E-value=0.12  Score=40.02  Aligned_cols=40  Identities=33%  Similarity=0.474  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .++++++|+|+++ +|+++++.+...|.+|++++++++..+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~  172 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE  172 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            4678999999988 999999988889999999998876543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.58  E-value=0.14  Score=42.27  Aligned_cols=41  Identities=17%  Similarity=0.116  Sum_probs=34.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      |++.|.|+ |=+|..++..|+..|++|++.|++++..+....
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~   48 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA   48 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            46777776 889999999999999999999999876655433

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=94.56  E-value=0.099  Score=44.23  Aligned_cols=66  Identities=20%  Similarity=0.224  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH--HHHHHHHHhCCceEEEEeccCCC
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      ..+.||++.|.|. |.||+.+++.|...|++|+++++.......  ....+.+.....++....+=+++
T Consensus       112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~  179 (378)
T PRK15438        112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFK  179 (378)
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCC
Confidence            4689999999998 999999999999999999999864321110  01122222222367776666655

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.55  E-value=0.13  Score=40.06  Aligned_cols=37  Identities=30%  Similarity=0.387  Sum_probs=33.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +++||.++|.|| |..|..=++.|++.|++|++++...
T Consensus         9 ~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~   45 (210)
T COG1648           9 DLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF   45 (210)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            689999999998 8899999999999999999987665

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.51  E-value=0.13  Score=41.34  Aligned_cols=41  Identities=29%  Similarity=0.386  Sum_probs=35.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+++++|.|+++++|.++++.....|++|+++++++++.+.
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  186 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY  186 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence            36789999999999999999888999999999888766443

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=94.48  E-value=0.13  Score=42.12  Aligned_cols=40  Identities=23%  Similarity=0.177  Sum_probs=33.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -.|.+++|+|+ +++|...++.....|++|+++++++++.+
T Consensus       164 ~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~  203 (329)
T TIGR02822       164 PPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARR  203 (329)
T ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            35889999997 89999888777778999999999877653

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=94.47  E-value=0.14  Score=48.46  Aligned_cols=75  Identities=13%  Similarity=0.082  Sum_probs=54.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-Ce-------------EEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DN-------------VIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~-------------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      -..|.|+|.|+ |.+|...++.|++.. +.             |.++|++.+.++++.+.+    .  ++..+++|++|.
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~--~~~~v~lDv~D~  639 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----E--NAEAVQLDVSDS  639 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----C--CCceEEeecCCH
Confidence            34778999997 999999999998764 33             888999887776554433    1  356789999987


Q ss_pred             hhh-hhhccceEEEEec
Q 031009          144 PYN-IIYKYSWLLVNIY  159 (167)
Q Consensus       144 ~~~-~~~~~~dilvN~a  159 (167)
                      +.. .+....|++|++.
T Consensus       640 e~L~~~v~~~DaVIsal  656 (1042)
T PLN02819        640 ESLLKYVSQVDVVISLL  656 (1042)
T ss_pred             HHHHHhhcCCCEEEECC
Confidence            632 2224478887764

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.47  E-value=0.15  Score=40.54  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      ..|..++|+|+++++|.++++.....|++|+.+++++++.+.
T Consensus       131 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  172 (305)
T cd08270         131 LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG  172 (305)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            358899999999999999999999999999999988765543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=94.46  E-value=0.14  Score=41.29  Aligned_cols=41  Identities=17%  Similarity=0.245  Sum_probs=35.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .++.+++|+|+++++|.++++.+...|++|+.++++.++.+
T Consensus       144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~  184 (329)
T cd05288         144 KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR  184 (329)
T ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            35789999999999999999999999999999988776544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR00936 ahcY adenosylhomocysteinase

Probab=94.42  E-value=0.12  Score=44.16  Aligned_cols=40  Identities=20%  Similarity=0.257  Sum_probs=35.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+.
T Consensus       192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~  231 (406)
T TIGR00936       192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRA  231 (406)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence            578999999997 8899999999999999999999887543

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.41  E-value=0.2  Score=40.77  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=35.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      ++|.|.|+ |-+|.+++..|+..|++|++++++.+..++..+.
T Consensus         5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            45777777 8899999999999999999999998877766553

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=94.31  E-value=0.2  Score=44.11  Aligned_cols=37  Identities=22%  Similarity=0.125  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ..+.||++.|.|. |.||+++|+.|...|++|+.+++.
T Consensus       134 ~~l~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~  170 (525)
T TIGR01327       134 TELYGKTLGVIGL-GRIGSIVAKRAKAFGMKVLAYDPY  170 (525)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCC
Confidence            4689999999988 889999999999999999999984

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.31  E-value=0.13  Score=39.99  Aligned_cols=42  Identities=36%  Similarity=0.421  Sum_probs=30.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSL  124 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l  124 (167)
                      ....||+|-||.+++++|++.|++|++..|+.+ +.+.+.+++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l   45 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL   45 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence            344566699999999999999999999866554 444444443

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.29  E-value=0.26  Score=43.45  Aligned_cols=38  Identities=26%  Similarity=0.124  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ..+.||++.|.|. |.||+.+++.|...|++|+.+++..
T Consensus       136 ~~l~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~  173 (526)
T PRK13581        136 VELYGKTLGIIGL-GRIGSEVAKRAKAFGMKVIAYDPYI  173 (526)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            3689999999998 7899999999999999999999853

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.26  E-value=0.15  Score=33.61  Aligned_cols=35  Identities=29%  Similarity=0.577  Sum_probs=31.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSR  112 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r  112 (167)
                      .+++|+++|.|. |+.|+.+++.|.+. +.+|.+++|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            578899999999 99999999999998 577988888

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.25  E-value=0.13  Score=44.64  Aligned_cols=39  Identities=18%  Similarity=0.235  Sum_probs=33.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      .+.+|.++|-|. ||.|+++++.|.+.|+.|.+.|++...
T Consensus        12 ~~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~   50 (473)
T PRK00141         12 QELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETA   50 (473)
T ss_pred             cccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHH
Confidence            467788999985 899999999999999999999987543

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=94.22  E-value=0.16  Score=43.08  Aligned_cols=39  Identities=18%  Similarity=0.255  Sum_probs=34.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ...+.||++.|.|. |.||+.+++.+...|++|+++++..
T Consensus       111 g~~l~gktvGIIG~-G~IG~~va~~l~a~G~~V~~~Dp~~  149 (381)
T PRK00257        111 GVDLAERTYGVVGA-GHVGGRLVRVLRGLGWKVLVCDPPR  149 (381)
T ss_pred             CCCcCcCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCcc
Confidence            34789999999998 7899999999999999999998753

>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein

Probab=94.21  E-value=0.59  Score=37.23  Aligned_cols=34  Identities=18%  Similarity=0.336  Sum_probs=27.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-----------CeEEEEeCC
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG-----------DNVIICSRS  113 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G-----------~~Vi~~~r~  113 (167)
                      +..+++|.|+ ||+|..+++.|++.|           .+++++|.+
T Consensus        10 ~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D   54 (244)
T TIGR03736        10 RPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDD   54 (244)
T ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCC
Confidence            4557999988 999999999999864           278888754

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.

>KOG2015 consensus NEDD8-activating complex, catalytic component UBA3 [Posttranslational modification, protein turnover, chaperones]

Probab=94.18  E-value=0.16  Score=42.13  Aligned_cols=73  Identities=15%  Similarity=0.276  Sum_probs=50.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEEe
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRS-------------------AERVDSAVQSLREEFGEQHVWVPP  137 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  137 (167)
                      +..-+++|.|| ||+|-++.+-|+-.|.. +.++|-+                   +.+.+.+++.+....+...+....
T Consensus        38 l~~~kiLviGA-GGLGCElLKnLal~gF~~~~viDmDTId~sNLNRQFLF~~~DiG~pKAqvAA~fvn~Rvp~~~v~~h~  116 (422)
T KOG2015|consen   38 LQDCKILVIGA-GGLGCELLKNLALSGFRQLHVIDMDTIDLSNLNRQFLFRESDIGEPKAQVAAEFVNRRVPGCVVVPHR  116 (422)
T ss_pred             HhhCcEEEEcc-CcccHHHHHhHHhhccceeEEEeecceecccchhhhcccccccCchhHHHHHHHHHhhCCCcEEeeee
Confidence            33456999988 99999999999998853 5555421                   234555556666666665677888


Q ss_pred             ccCCChhhhhhhcc
Q 031009          138 SRLVSAPYNIIYKY  151 (167)
Q Consensus       138 ~Dv~d~~~~~~~~~  151 (167)
                      .++.|.......++
T Consensus       117 ~kIqd~~~~FYk~F  130 (422)
T KOG2015|consen  117 QKIQDKPISFYKRF  130 (422)
T ss_pred             cchhcCCHHHHhhh
Confidence            88988765555544

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.14  E-value=0.17  Score=40.03  Aligned_cols=41  Identities=29%  Similarity=0.436  Sum_probs=35.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .+++.++|+|+++++|.++++.+...|++|+.++++.+..+
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA  178 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence            35789999999999999999999999999999988776543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd00704 MDH Malate dehydrogenase

Probab=94.13  E-value=0.053  Score=44.82  Aligned_cols=43  Identities=26%  Similarity=0.314  Sum_probs=33.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-C------eEEEEeCCh--hHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG-D------NVIICSRSA--ERVDSAVQSL  124 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G-~------~Vi~~~r~~--~~~~~~~~~l  124 (167)
                      ++.|||++|.+|..++..|+..| +      .++++|+++  +.++....++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl   53 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMEL   53 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeeh
Confidence            48999999999999999999866 3      499999987  5443333334

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.08  E-value=0.16  Score=36.61  Aligned_cols=35  Identities=37%  Similarity=0.636  Sum_probs=29.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      |+|-|+ |+||.-++..|.+.|++|.+++|.. ..+.
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~   35 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEA   35 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHH
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHh
Confidence            466776 8899999999999999999999987 5443

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.07  E-value=0.17  Score=40.73  Aligned_cols=41  Identities=27%  Similarity=0.234  Sum_probs=35.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      .+++.++|.|+++++|.++++.....|++|+.++++++..+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~  178 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE  178 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence            46789999999999999999988889999999888776544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	167
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-05
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-05
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-05
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		7e-05
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		8e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		8e-05
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-04
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-04
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-04
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		5e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		6e-04
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		7e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		7e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		7e-04
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		7e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		7e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		7e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		7e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		7e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		8e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		8e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		8e-04
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		8e-04
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		8e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		8e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		8e-04
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-04
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		8e-04
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		8e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		8e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		8e-04
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		9e-04
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		9e-04

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG
Sbjct: 11  VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG 56

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           +L     ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+          P
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL-------P 67
Query: 137 PSR 139
           P++
Sbjct: 68  PTK 70

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 73  KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           +R+P L     L+T ST GIG+A+A+   + G +V++ SR  + VD AV +L+ E
Sbjct: 9   RRDP-LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGE 62

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA 143
           L+TGST+GIG A+A++   AG  VII   S ER  +  + +  ++G +   V  + L   
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70
Query: 144 PYNIIYKYSWLLVN 157
             N  ++  + LV+
Sbjct: 71  SINKAFEEIYNLVD 84

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 15/91 (16%)
Query: 78  LPPYNV-----LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           + PY++     ++TG + GIG A  +  L+AG  V  C+R  ER+ +A  +LR+ F    
Sbjct: 1   MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF---- 56
Query: 133 VWVPPSRLVSAPYNIIYKYSWLLVNIYVPSC 163
              P +RL ++  +++     L V  +  +C
Sbjct: 57  ---PGARLFASVCDVLDA---LQVRAFAEAC 81

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG 70

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 72  VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+R   L     L+T ST GIG A+A+   + G +V++ SR  E VD  V +L+ E
Sbjct: 6   VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           L   +V++TG TKGIG  +A  F +AG NV +  RS   +D+ V  L ++ G   V
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSGKV 62

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L     L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
            L     L+TGST GIG A+A   +  G NV+I  R  E V+  ++ +R ++
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY 58

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 78  LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L   +VL+TG TKGIG  +A  F +AG NV + +RS   + S    L E
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE 87

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 76  PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFG 129
           P L    VLITGS++GIG A A+ F +AG  V +  R A   +D  + S+R + G
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG 57

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           +VL+TG  +GIG A+A+ F  AGD V I  RS E
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE 56

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           ++ +L    +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65
Query: 134 W 134
           W
Sbjct: 66  W 66

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           ++ +L    +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  
Sbjct: 27  KQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 86
Query: 134 W 134
           W
Sbjct: 87  W 87

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 9   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 56

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 55

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           ++ +L    +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65
Query: 134 W 134
           W
Sbjct: 66  W 66

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 11  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 58

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 75

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 3   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 50

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 28  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 75

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 69

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 22  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 69

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 25  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 72

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 55

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V
Sbjct: 18  RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 65

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           ++ +L    +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  
Sbjct: 4   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 63
Query: 134 W 134
           W
Sbjct: 64  W 64

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           ++ +L    +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  
Sbjct: 8   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 67
Query: 134 W 134
           W
Sbjct: 68  W 68

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 68

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 26  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 68

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFG 129
           ML     ++TGST GIG A+A E  KAG +V+I      E ++    +L  +FG
Sbjct: 1   MLKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFG 54

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 30  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 72

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE
Sbjct: 10  LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 52

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-15
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-15
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-14
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	8e-13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	8e-13
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-12
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-12
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-12
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-12
3imf_A	257	Short chain dehydrogenase; structural genomics, in	7e-12
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	9e-12
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-11
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-11
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-11
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-11
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-11
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-11
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-11
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-11
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-11
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	9e-11
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-10
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-10
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-10
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-10
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-10
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-10
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-10
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-10
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-10
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-10
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-10
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-10
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	8e-10
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-09
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-09
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-09
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-09
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-09
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-09
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-09
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-09
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-09
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-09
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-09
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-09
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-09
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-09
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-09
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-09
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	4e-09
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-09
1xkq_A	280	Short-chain reductase family member (5D234); parra	5e-09
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-09
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	7e-09
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-09
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	9e-09
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	9e-09
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-08
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-08
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-08
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-08
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-08
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-08
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-08
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-08
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-08
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-08
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-08
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	3e-08
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-08
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-08
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-08
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	4e-08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-08
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	4e-08
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-08
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-08
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-08
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-08
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-08
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-08
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-08
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-08
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-08
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-08
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-08
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	8e-08
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	8e-08
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	9e-08
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	9e-08
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	9e-08
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	9e-08
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-07
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-07
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-07
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-07
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-07
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-07
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-07
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-07
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-07
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-07
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-07
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-07
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-07
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-07
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-07
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-07
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-07
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-07
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-07
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-07
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-07
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-07
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-07
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	5e-07
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-07
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-07
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	5e-07
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	8e-07
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-07
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-06
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-06
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-06
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-06
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-06
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-06
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-06
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-06
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-06
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-06
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-06
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-06
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	3e-06
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-06
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-06
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	5e-06
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	6e-06
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	6e-06
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-06
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	6e-06
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	7e-06
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	7e-06
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	7e-06
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	7e-06
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	7e-06
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	9e-06
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-05
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-05
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-05
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-05
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-05
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-05
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-05
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-05
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-05
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-05
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	3e-05
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-05
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-05
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	5e-05
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-05
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	6e-05
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-05
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-05
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	7e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-04
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	2e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-04
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-04
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-04
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-04
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	5e-04
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	9e-04
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	9e-04

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 70.6 bits (174), Expect = 2e-15
 Identities = 21/54 (38%), Positives = 37/54 (68%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +ITGS+ GIG A+A+ F K G ++++ +R  +R+  A +SL+E+FG + + V 
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 69.6 bits (171), Expect = 6e-15
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 61  DSSSSSSSSSSVKREPMLPPYN-----VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           ++ +  S   S  ++ MLPP +       ITG   G+G  +       G   +I SR  +
Sbjct: 2   NTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD 61

Query: 116 RVDSAVQSLREEFGEQHVWVP 136
            + +  + +  + G +   + 
Sbjct: 62  VLKATAEQISSQTGNKVHAIQ 82

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 68.4 bits (168), Expect = 1e-14
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L+TGST GIG A+A   +  G NV+I  R  E V+  ++ +R ++ +  +
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAIL 63

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 63.3 bits (155), Expect = 8e-13
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVWVP 136
            ++T  + G+G+A A E  + G  +++ SR+ E++++A   +     G Q   V 
Sbjct: 10  AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 63.3 bits (155), Expect = 8e-13
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+
Sbjct: 25  LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 62.9 bits (154), Expect = 1e-12
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +
Sbjct: 13  LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK 56

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 62.6 bits (153), Expect = 2e-12
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             ITG   GIG+ +A+ F++ G + +I SRS  RV +A + L    G + + + 
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLS 83

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 19/48 (39%), Positives = 28/48 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            L+T ST GIG A+A+   + G +V++ SR  E VD  V +L+ E   
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS 64

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 62.3 bits (151), Expect = 3e-12
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            ++TG  KGIG+ + K+    G  V++  R   +   AV+ L+    E 
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN 63

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 60.6 bits (148), Expect = 7e-12
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           V+ITG + G+G  +A  F K G  V+I  R+ E+++ A   + +  G+
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ 56

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 59.9 bits (146), Expect = 9e-12
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           +++TG+  G+G AL    ++ G  V +  R  +R+           G   + + 
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE----LLLGNAVIGIV 55

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           L+TG TKGIG+A+ +EF   G  +  C+R+   ++  +   +++  +    V
Sbjct: 18  LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            LITG+TKGIG  +A+ F  AG  +++  R    +D+A ++L E+FG     V 
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 69  SSSVKREPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
           +S  K    L P        ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   
Sbjct: 2   ASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADE 61

Query: 124 LREEFGE 130
           L+     
Sbjct: 62  LQANLPP 68

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           +L+TG+ +GIG A A+ +   G +V++  R+   +      ++     Q + + 
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIA 70

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 59.4 bits (145), Expect = 2e-11
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           +L+TG++ GIG   A  + + G  VI+  R+ E++      + EE G Q  W  
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFI 68

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 58.7 bits (143), Expect = 3e-11
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           ++ITG++ G+G  LAK +   G    +  RS  ++ +    L    G
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVG 50

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 17/85 (20%), Positives = 33/85 (38%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS 111
            +HS  +   + +    S   + +        L+TG   G+G  +A+     G +V+I  
Sbjct: 5   HHHSSGVDLGTENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITG 64

Query: 112 RSAERVDSAVQSLREEFGEQHVWVP 136
           R  + +D+A   +    G     V 
Sbjct: 65  RRPDVLDAAAGEIGGRTGNIVRAVV 89

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 58.3 bits (142), Expect = 5e-11
 Identities = 17/46 (36%), Positives = 31/46 (67%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G
Sbjct: 25  LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG 70

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 58.0 bits (141), Expect = 7e-11
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVWVP 136
            ++TG + GIG A  +  L+AG  V  C+R  ER+ +A  +LR+ F G +     
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 57.6 bits (140), Expect = 9e-11
 Identities = 16/48 (33%), Positives = 25/48 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            L+TG   GIG  +A   + AG +V+I  R+ +++  AVQ L      
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN 61

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 11/48 (22%), Positives = 23/48 (47%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            +ITG+++GIG  +A      G  V++ +RS + ++     +      
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKH 57

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 15/54 (27%), Positives = 31/54 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +ITG+++GIG A+A+   + G  + + +RS +R++     L +E G +  +  
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHH 58

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E      
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF 58

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 55.9 bits (136), Expect = 3e-10
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           L+TGS +G+G+A A+    AG  VI+    A  +  +V +L  +  + H 
Sbjct: 13  LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHG 62

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 56.0 bits (136), Expect = 3e-10
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            L+TG ++GIG  +A+  L+AG  V IC+R AE        L  
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA 75

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 56.0 bits (135), Expect = 3e-10
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPS 138
             ++   T  +G   A      G  V++C R  ++  +A  S+ + F         +
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA 177

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V++TG++KGIG  +A    K G +V++ +RS E +   V    E       ++ 
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 84

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 56.0 bits (136), Expect = 3e-10
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            ++ G T G+G A  +  ++ G  V++  R+   +    +  
Sbjct: 11  AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF 52

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 23/76 (30%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----------------------VDS 119
           VLITG+++GIG A A+     G  V + +R  +R                          
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWAR 67

Query: 120 AVQSLREEFGEQHVWV 135
           AV ++ E FGE    V
Sbjct: 68  AVAAMEEAFGELSALV 83

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPY-------NVLITGSTKGIGYALAKEFLKAGD 105
           +H   + A +    S       EP            +VL+TG TKGIG  +A  F +AG 
Sbjct: 7   HHMGTLEAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGA 66

Query: 106 NVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           NV + +RS   + S    L E      + V 
Sbjct: 67  NVAVAARSPRELSSVTAELGELGAGNVIGVR 97

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 55.7 bits (135), Expect = 5e-10
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V++TG TKGIG  +A  F +AG NV +  RS   +D+ V  L +    + + V 
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 55.3 bits (134), Expect = 5e-10
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 21/74 (28%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER---------------------VDSAV 121
           V+ITG++ GIG A+A+ F + G  +++ +R  ER                      D+A+
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAI 78

Query: 122 QSLREEFGEQHVWV 135
               + +G     V
Sbjct: 79  TRAEKIYGPADAIV 92

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 54.9 bits (133), Expect = 8e-10
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 24/77 (31%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------------------VD 118
           VL+TG+T G G  + + F++ G  VI   R  ER                        ++
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIE 62

Query: 119 SAVQSLREEFGEQHVWV 135
             + SL  E+    + V
Sbjct: 63  EMLASLPAEWCNIDILV 79

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 54.9 bits (133), Expect = 8e-10
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            +ITG+T GIG A AK F+  G  V I  R  + +D+A+  +
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI 73

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           NV+   +  GIG   ++E +K      +     E   +A+  L+    + ++
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNI 57

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 21/66 (31%), Positives = 30/66 (45%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
             SS    +   M  P    +TG + GIG A+A+     G  V  C+R A+ V +AV  L
Sbjct: 9   HHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68

Query: 125 REEFGE 130
           R    +
Sbjct: 69  RAAGHD 74

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 12/64 (18%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------VDSAVQSLREEFGEQ 131
           L+  +++GIG A+A    + G  V IC+R+ E             +   +  L E+  E 
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEV 82

Query: 132 HVWV 135
            + V
Sbjct: 83  DILV 86

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 27/102 (26%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--- 116
           +       SS  V R   +    + ITG+T G G A A+ F +AG ++++  R  ER   
Sbjct: 2   SSHHHHHHSSGLVPRGSHMSS-TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA 60

Query: 117 -----------------------VDSAVQSLREEFGEQHVWV 135
                                  + +AV +L EEF      +
Sbjct: 61  LAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLI 102

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 54.0 bits (131), Expect = 1e-09
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           VL+TG+ KGIG    +     G  V+  SR+   +DS V+    
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG 53

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           +++TG  +GIG A  +    AG NV +  RSA       + + +EFG
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG 63

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 54.1 bits (131), Expect = 2e-09
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            ++TG  + IG A      +AG  VII          AV+ LR E  +
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD 63

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 54.1 bits (131), Expect = 2e-09
 Identities = 15/51 (29%), Positives = 29/51 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           +LITG++ GIG  +A+E   AG  +++ +R   R+++    +R+  G    
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALA 57

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 16/40 (40%), Positives = 24/40 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            L+TG++ G G A+A+  + AGD VI  +R  E +D  V 
Sbjct: 8   WLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA 47

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 18/50 (36%), Positives = 25/50 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            +ITGS+ GIG A A  F + G  V I  R AER++   Q +      + 
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQ 58

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 27/80 (33%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------------- 116
            LITG++ GIG A A+     G  V I +R  E+                          
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQ 69

Query: 117 -VDSAVQSLREEFGEQHVWV 135
            VD+AV S  E  G   + V
Sbjct: 70  GVDAAVASTVEALGGLDILV 89

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           V + G+   IG  +AK+F   G  V    R+ E++   V  +    G 
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR 57

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 52  SYHSPIIRADSSSSSSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
           S H     +    +      + R  M        L+TG++ GIG A+A+  ++ G  V+ 
Sbjct: 2   SSHHHHHHSSGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVG 61

Query: 110 CSRSAERVDSAVQSLREEFGEQHV 133
           C+R+   ++      +       +
Sbjct: 62  CARTVGNIEELAAECKSAGYPGTL 85

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            ++TG+++G G ALA +  +    G  +++ +RS   +    + L  +  +  V
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 66  SSSSSSVKREPM--LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123
            SS    +   M        L+TG+T GIG  +A+   K G  V +C+R  E + + ++ 
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 124 LREEFGE 130
           LRE   E
Sbjct: 66  LREAGVE 72

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 10/48 (20%), Positives = 26/48 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           V+I+G    +G  LA+   + G ++++ +R+ ER++   + + +    
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR 61

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 17/48 (35%), Positives = 26/48 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +    
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP 76

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 53.0 bits (128), Expect = 5e-09
 Identities = 19/45 (42%), Positives = 27/45 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+ITGS+ GIG   A  F + G NV I  RS+ER++   Q + + 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS 53

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 52.5 bits (127), Expect = 5e-09
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           L+TG+ KGIG    K    +G  V+  +R+   + S  +    
Sbjct: 11  LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG 53

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 52.4 bits (126), Expect = 7e-09
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 68  SSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSL 124
           SS  V R   +   ++LITG  +G+G  L K  L       ++    R+ E+    ++ L
Sbjct: 11  SSGLVPRGSHMN--SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDL 67

Query: 125 REEFGEQHV 133
            +     H+
Sbjct: 68  AKNHSNIHI 76

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 52.3 bits (126), Expect = 8e-09
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGD---NVII 109
           +HS  +    S  S    + +R   L    VLITG++ GIG A A E+L+A +    +I+
Sbjct: 9   HHSSFLVPRGSHMSQGRKAAER---LAKKTVLITGASAGIGKATALEYLEASNGDMKLIL 65

Query: 110 CSRSAERVDSAVQSLREEFGEQHVWV 135
            +R  E+++   +++ +EF    V V
Sbjct: 66  AARRLEKLEELKKTIDQEFPNAKVHV 91

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F 
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE 56

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 16/85 (18%)

Query: 67  SSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------- 113
           +++++   +P     +VL+TG  +GIG A+A+     G  V +  R              
Sbjct: 2   TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVD 61

Query: 114 ---AERVDSAVQSLREEFGEQHVWV 135
              ++ VD A  ++ E  G   V V
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLV 86

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 51.8 bits (125), Expect = 1e-08
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE 57

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            +TG+  GIG  + + F  +G  +I+  R A  +D A Q L   
Sbjct: 15  AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA 58

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             L+TGST+GIG A+A++   AG  VII   S ER  +  + +  ++G +   V 
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSAERVDSAVQSLREEFGEQHVWVP 136
           +L+TG ++GIG ++         + ++   +RS       ++ L+E++G++  +V 
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA----PLKKLKEKYGDRFFYVV 56

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            LITG   G+G AL   F+  G  V +  +SAER+           G   V V 
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE----VAHGGNAVGVV 57

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 13/48 (27%), Positives = 29/48 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            ++TG+++GIG A+A++    G  V++ +R  E++ +  + +    GE
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE 79

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 66  SSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSL 124
             SS  V R   +     ++TG+ K IG A+A +  + G  V+I    SAE   S    L
Sbjct: 9   HHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL 68

Query: 125 REEFGEQHVWVP 136
            +E     V   
Sbjct: 69  NKERSNTAVVCQ 80

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 15/62 (24%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------------ERVDSAVQSLREE 127
           +L+ G +  +G  + K F     N I                     E + S ++ +  +
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSK 84

Query: 128 FG 129
             
Sbjct: 85  SI 86

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWV 135
           ML     ++TGST GIG  +A      G ++++     A  ++     L  + G + ++ 
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 136 P 136
            
Sbjct: 61  G 61

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 50.7 bits (122), Expect = 3e-08
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            ++TG+  G+G A+A     AG  V +  R  + +         E G+  + VP
Sbjct: 31  AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA----AEIGDDALCVP 80

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 50.6 bits (122), Expect = 3e-08
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            ++TG++ G G A+A  FL  GD V     SAE ++   ++    + ++ + V 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVR 58

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 4/82 (4%)

Query: 37  TVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYAL 96
           +V  R    +L    +Y    +  D    S +S+     P+     V ITGS   +G AL
Sbjct: 108 SVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPL----TVAITGSRGLVGRAL 163

Query: 97  AKEFLKAGDNVIICSRSAERVD 118
             +    G  VI   R   +  
Sbjct: 164 TAQLQTGGHEVIQLVRKEPKPG 185

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 17/48 (35%), Positives = 26/48 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           V++TG+  GIG A+AK+F      V+      +R++  VQ LR    E
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE 57

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            LITG++ GIG  +A  + +AG  V + +R ++ +      +   
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV 79

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 50.3 bits (121), Expect = 4e-08
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
             +TGS+ GIG+A+A+ + +AG +V I   S    + A    + 
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT 80

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 50.2 bits (121), Expect = 4e-08
 Identities = 12/52 (23%), Positives = 25/52 (48%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
             L+TG+++GIG+ +A      G  V+  + S    +    S++E+  +   
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARG 58

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 26/80 (32%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAER--------------------- 116
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R  E+                     
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 117 ---VDSAVQSLREEFGEQHV 133
              +D+ V  + E  G   +
Sbjct: 63  DKSLDTFVSKVGEIVGSDGL 82

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 50.2 bits (121), Expect = 4e-08
 Identities = 15/48 (31%), Positives = 29/48 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            ++TG+  GIG A+A  F KAG +V++    +E  ++   ++R+  G+
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK 62

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 50.2 bits (121), Expect = 4e-08
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-----------------AERVDSAVQSLR 125
           V +TG+ KGIGYA A  F++AG  V    ++                 A +V    Q L 
Sbjct: 10  VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLL 69

Query: 126 EEFGEQHVWV 135
            E       V
Sbjct: 70  AETERLDALV 79

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            ++TG +KGIG A+A+   KAG  V I         + V  L   
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG 59

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 50.0 bits (120), Expect = 5e-08
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFG 129
            +ITGST GIG A+A+   KAG N+++    + + + +    +     
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS 75

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 49.9 bits (120), Expect = 5e-08
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 18/71 (25%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------------VDSAVQSL 124
           V+ITG+++GIG  L + +      V+  SRS +                    D  V+  
Sbjct: 31  VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREG 90

Query: 125 REEFGEQHVWV 135
            E FG     V
Sbjct: 91  IERFGRIDSLV 101

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 49.8 bits (120), Expect = 6e-08
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 83  VLITG-STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           VL+T  +  GIG   A+  L  G +V+I      R+      L +    +   V 
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 49.7 bits (119), Expect = 6e-08
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 30  HCRYGSSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGST 89
           H  + SS +  R +         +HS  +    S  ++ +  V           L+TG+ 
Sbjct: 6   HHHHHSSGLVPRGSHMGSSHHHHHHSSGLVPRGSHMTAPTVPV----------ALVTGAA 55

Query: 90  KGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWV 135
           K +G ++A+     G  V +   RSA   ++   +L        + V
Sbjct: 56  KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 49.7 bits (119), Expect = 6e-08
 Identities = 14/52 (26%), Positives = 22/52 (42%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
             +TG   G+G  L ++ L  G  V I     + +D A+ +L  E     V 
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             L+TG+T GIG A+A+ F   G  V +     +     ++ +  + G+      
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTRED----KLKEIAADLGKDVFVFS 79

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 49.1 bits (118), Expect = 7e-08
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 20/71 (28%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD------------------SAVQSL 124
           VLITG+T G+G A A+     G ++++  R A  +                      ++L
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGARALPADLADELEAKAL 60

Query: 125 REEFGEQHVWV 135
            EE G   + V
Sbjct: 61  LEEAGPLDLLV 71

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 49.7 bits (119), Expect = 7e-08
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSLREEFGEQHVWVPPSRL 140
           +LITG++ G G   A+    AG  V    R     +++ V+++     +  V +    L
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 49.1 bits (118), Expect = 8e-08
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 16/69 (23%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLRE 126
           VL+TG  +GIG A+A+ F  AGD V I  RS                 E+V+ A + + E
Sbjct: 24  VLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEE 83

Query: 127 EFGEQHVWV 135
             G   V +
Sbjct: 84  THGPVEVLI 92

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 49.0 bits (118), Expect = 8e-08
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
             LITG++ GIG A+A+   K G  VII   + E     ++SL     + 
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEE----KLKSLGNALKDN 61

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            ++TG++ GIG A A  F + G  V++ +R+   +      +    GE
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE 58

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 49.2 bits (118), Expect = 9e-08
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           VLITG+  GIG   A EF K    +++   +   ++      +    + H +V
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            ++TGS  GIG A A+   + G  V++   +AE  ++  + +  + G 
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT 59

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 49.0 bits (118), Expect = 9e-08
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 18/70 (25%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------------VDSAVQSLR 125
           L+TG ++GIG A+A+  +  G  V I SR+ E                       V+   
Sbjct: 6   LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRAL 65

Query: 126 EEFGEQHVWV 135
           E  G  HV V
Sbjct: 66  EALGGLHVLV 75

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            ++TG   GIG A A EF + G  +++       ++ AV  LR +  +
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD 81

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             L+TG+++GIG A+A+   + G  VI  + S        Q++ +  G+    + 
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSES----GAQAISDYLGDNGKGMA 61

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 62  SSSSSSSSSSVKREPMLPPYNV-----LITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
           SS     + ++  + M  P+++     ++TG+  GIG A+A  + +AG +V+   R+ + 
Sbjct: 8   SSGVDLGTENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DG 66

Query: 117 VDSAVQSLREE 127
           V      + + 
Sbjct: 67  VKEVADEIADG 77

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 13/61 (21%), Positives = 20/61 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS 142
            L+TG+  GIG A++      G  V  C          V+ L     ++           
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69

Query: 143 A 143
           A
Sbjct: 70  A 70

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           VLITG+  GIG A  + F K G  ++ C      +  A +++ 
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG 50

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  + + FG +     
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYESSGYA 99

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           +L+TG+  GIG A    F + G +++   R    +  AV         + + V 
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV----AALEAEAIAVV 58

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 14/48 (29%), Positives = 19/48 (39%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            LITG+  GIG A A      G  V    R+   V+     +    G+
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ 78

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
           VLITG   G+G A A      G  + +   S+E ++++  ++ E   +
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD 63

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 9/68 (13%)

Query: 82  NVLITGSTKG-IGYALAKEFLKAGDNVII-CSR-SAERVDSAVQSLREEFGEQHVWVPPS 138
            VLITG+ KG IG  + +  L+ G  V++  SR S +  D   QS+  ++G +      S
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYY-QSIYAKYGAKG-----S 531

Query: 139 RLVSAPYN 146
            L+  P+N
Sbjct: 532 TLIVVPFN 539

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 5/84 (5%)

Query: 53  YHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
           +H  +   ++ +    S        L     ++TG+++GIG A+A E  + G  VI  + 
Sbjct: 5   HHHHMGTLEAQTQGPGSMDK----TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTAT 60

Query: 113 SAERVDSAVQSLREEFGEQHVWVP 136
           +    +    +  ++ G +     
Sbjct: 61  TEAGAEGIGAAF-KQAGLEGRGAV 83

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQ 131
            LIT  TKG+G  + ++ L  G +V +   S       ++   ++  E+
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER 58

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 62  SSSSSSSSSSVKREPM---LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERV 117
           SS     + ++  + M         ++TG  +GIG  +A+    +G ++ I     AE V
Sbjct: 8   SSGVDLGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV 67

Query: 118 DSAVQSLRE 126
              +  L  
Sbjct: 68  APVIAELSG 76

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH 52

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAERVDSAVQSLREEFGE 130
           +LITG+ KGIG A+A EF +A          +++ SR+A  ++      R E   
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL 59

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 18/54 (33%), Positives = 25/54 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           VLITGS++GIG A A+ F +AG  V +  R A        +     G    +  
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVD----SAVQSLREEFGEQHVWV 135
           +L+ G++  +G A+ +  L+    VI   R +    VD     +++ + E+ G+    V
Sbjct: 6   ILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIV 63

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            L+TG+ +GIG A+A      G  VI+   +AE   +A  S+
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI 50

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            L+TGST GIG  +A+   +AG N+++         +   +     G + V  P
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APALAEIARHGVKAVHHP 57

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG+ K +G ++A+     G  V +   RSA   ++   +L        + V
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            LITGS +GIG A A+ +++ G  V I     ER   A      E G     V
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAA----AEIGPAAYAV 59

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 8/43 (18%), Positives = 13/43 (30%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           ++T      G   A    +AG  V     S ++ D        
Sbjct: 5   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET 47

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 13/45 (28%), Positives = 26/45 (57%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           V+ITG+  G+G   A+E  + G  VI+  R   + ++A +++  +
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ 63

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           ++I+G   GIG A  K    AG  ++        V + +
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADL 42

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           + ITGS  GIG AL +   +AG  VI   R    +++ +
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADL 42

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           ++TG+++GIG  +A +  KAG  V I  R  + +    Q  + 
Sbjct: 9   VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS 51

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 46.7 bits (112), Expect = 5e-07
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGE 130
           V+ITGS+ G+G ++A  F      V++      +  +S ++ +++  GE
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE 58

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 46.3 bits (111), Expect = 8e-07
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGE 130
            L+TGS++G+G A A    + G N++I  +RS +      + + +   +
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK 55

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 46.4 bits (111), Expect = 8e-07
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            LITG+  G G  +AK F K G  V+I  R     +        E G+  + V 
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVA----GEIGDAALAVA 61

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQS 123
            +  + +     M       +TG   G+G A+++    AG  V +  S   + V + +  
Sbjct: 10  GTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH 69

Query: 124 LREEFGEQHV 133
            R+   +   
Sbjct: 70  ERDAGRDFKA 79

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           V++TG  +GIG  + + F+ +G  V+IC +      +  Q L  
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG 55

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 16/69 (23%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLRE 126
           V++TG++ GIG A+A+ F+  G  VI  S                   ++V +++  + +
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFK 70

Query: 127 EFGEQHVWV 135
           E+G   V V
Sbjct: 71  EYGSISVLV 79

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 45.5 bits (109), Expect = 2e-06
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGE 130
             LITG+++GIG A+A    + G  + I   ++ E+ +   +  R     
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP 52

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 9/46 (19%), Positives = 15/46 (32%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
           L+T +    G A  +   + G  V+    S        +   E  G
Sbjct: 5   LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG 50

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
            ++TG + GIG A+    ++ G  V+  S   +   +     +
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK 59

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLRE 126
           M    + L+TG+++GIG ++A +  + G NV +  + S E+ ++ V+ ++ 
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA 51

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 16/55 (29%), Positives = 25/55 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             L+TG+++GIG A+A E   AG  V +   S+      V +     G +   V 
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           N L+TG +KGIG A+ +  L+  ++ +I     +
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ 39

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V++TG+++GIG A+A    KAG  V++    + +    V    E +G Q +   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFG 57

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 62  SSSSSSSSSSVKREPM-LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
            SS      S  RE +      VL+ G+   +   L  E    G   +   R+ E+  
Sbjct: 2   GSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP 59

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFG 129
            +ITG  + IG+++A    + G  V++    S       V  L     
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA 61

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 13/55 (23%), Positives = 24/55 (43%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
             ++TGS++G+G A+A +    G N+++    A     A     +  G   V   
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 25/78 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------------------------V 117
            +ITG   GIG A+A+ F   G ++ I                                V
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDV 69

Query: 118 DSAVQSLREEFGEQHVWV 135
           ++  + +   FG   + V
Sbjct: 70  EAFGKQVISTFGRCDILV 87

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
            +ITG T GIG A+A +F++ G  V+I  R ++  + A +S+  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT 52

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           +LITG+++ +G   A   L+ G  VII  R+     ++V  LR+ 
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQA 71

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
           +++T + +GIG A A  F + G  VI    +  ++    +    + 
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT 54

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 43.6 bits (104), Expect = 6e-06
 Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLRE 126
           ML     L+TG+++GIG A+A +  K G NV++  + + ++ +  V  +++
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK 51

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 43.7 bits (104), Expect = 6e-06
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 83  VLITGS--TKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFG 129
           V++TG+   KG+G   A+   + G  V I  +  A+  +  V+ L + +G
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG 72

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 44.0 bits (104), Expect = 6e-06
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 63  SSSSSSSSSVKREPMLPPYN------VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
           +S +      +   MLP         V ITG+++GIG A+A +  K G N++I +++A+ 
Sbjct: 22  ASMTGGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81

Query: 117 VDSAVQSLRE 126
               + ++  
Sbjct: 82  HPKLLGTIYT 91

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 43.7 bits (104), Expect = 6e-06
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 16/69 (23%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER----------------VDSAVQSLRE 126
            L+TG+  GIG A+      AG  V +  R+                    D    ++  
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAA 90

Query: 127 EFGEQHVWV 135
             G   + V
Sbjct: 91  GLGRLDIVV 99

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 43.7 bits (102), Expect = 7e-06
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 85  ITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP 144
           + G T  +G  LA      G  +++ SR  E+ ++     R   G+  +    +   +  
Sbjct: 5   LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEA 64

Query: 145 YNIIYKYSW 153
            +I      
Sbjct: 65  CDIAVLTIP 73

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 43.7 bits (104), Expect = 7e-06
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +ITG+  GIG   ++   +AG  V++       +  A        G   V   
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA----ASVGRGAVHHV 63

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 43.7 bits (104), Expect = 7e-06
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 63  SSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122
            S+S+  SS  R   L     +ITG   GIG   AK F++ G  V+I   + +       
Sbjct: 2   GSTSTPDSSTNR---LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58

Query: 123 SLREE 127
           ++   
Sbjct: 59  NIGSP 63

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 43.6 bits (104), Expect = 7e-06
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           V+ITG  +G+G   A++ + AG  V++     E   +  + L
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL 49

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 43.7 bits (104), Expect = 7e-06
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L++G  +G+G +  +  +  G  V+      E   +    L + 
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA 54

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 43.3 bits (103), Expect = 9e-06
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHV 133
             +TG   GIG ++ +   K G  V+  C  ++ R    ++  +    + + 
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYA 67

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 4/53 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            ++TG+  GIG A+A+     G +V+      +  D+A      + G      
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA----TKIGCGAAAC 80

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 12/39 (30%), Positives = 14/39 (35%), Gaps = 3/39 (7%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVD 118
           VLITG + GIG  LA            V    R  +   
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQG 43

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 7/50 (14%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC--SRSAERVDSAVQSLREEFGE 130
            ++TG  +GIG  ++++    G ++ +    +  E+    ++ +     +
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK 54

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           V++ G    +G A+ + F K G  V+    SA     +   + 
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD 48

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 7/51 (13%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLRE 126
           + I+G ++GIG A+AK     G NV + ++SAE        + +A + + E
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE 62

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 21/68 (30%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---------------------RVDSAV 121
           VL+TG  +GIG A+A+ F + G  V +C    E                          V
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFV 68

Query: 122 QSLREEFG 129
           +      G
Sbjct: 69  EEAAYALG 76

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 11/57 (19%), Positives = 17/57 (29%)

Query: 77  MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           M     VLI G T  IG  +    +  G    +  R     +     +   F +   
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA 57

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 9/51 (17%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII---CSRSAERVDSAVQSLREEFGE 130
           ++I G  K +G   AK F     N+++    ++ ++  +     L ++  +
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK 64

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 62  SSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSA 120
           SS     + ++  + M     VL+TG ++GIG A+ +   + G  V +  + + E  D+ 
Sbjct: 8   SSGVDLGTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV 67

Query: 121 VQSLREEFGE 130
           V ++ E  GE
Sbjct: 68  VAAITESGGE 77

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 7/55 (12%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGE 130
           + ITG+++GIG A+A    + G NV I ++SA         + SA  ++    G+
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 50  SKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVII 109
            +    P+I      S SS + V  E       V I GS      +LA   + +G  V++
Sbjct: 2   PEEMDKPLISLHLVDSDSSLAKVPDEAP----KVGILGSGD-FARSLATRLVGSGFKVVV 56

Query: 110 CSRSAERVDSAVQSLRE 126
            SR+ +R      S  +
Sbjct: 57  GSRNPKRTARLFPSAAQ 73

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
            ++TG+T G+G  + K+  +    V    R+ E + +  +   
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDHI-VYALGRNPEHLAALAEIEG 49

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            ++TG   GIG A A+ F K G  V++   + +        +
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI 71

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 40.9 bits (97), Expect = 5e-05
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            L+TG   G+G  + K  L  G  V     +          L
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL 50

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 40.8 bits (96), Expect = 6e-05
 Identities = 8/43 (18%), Positives = 13/43 (30%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125
           VL+ G    +G    + F      V           SA   ++
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK 52

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 9/95 (9%)

Query: 35  SSTVRFRRNCFSLRASKSYHSPIIRADSSSSSSSSSSVKREPMLPPYNVLITGSTKGIGY 94
            ST+RF      L A  +Y    +    ++ S+  +   +   L     ++TG+ +GIG 
Sbjct: 175 ESTMRFI-----LSAKSAYVDGQVFRVGAADSTPPADWDK--PLDGKVAVVTGAARGIGA 227

Query: 95  ALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG 129
            +A+ F + G  V+            ++ + ++ G
Sbjct: 228 TIAEVFARDGATVVAIDVDGAA--EDLKRVADKVG 260

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGE 130
           +++ G+ + IG A A  F + G NV++  + +AE   +AV  + +    
Sbjct: 11  IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS 59

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +ITG   G+G A A+  +  G + ++        ++      ++ G   V+ P
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA----KKLGNNCVFAP 64

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 40.7 bits (96), Expect = 7e-05
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +++G   G+G A  +     G  V+I   +AE+  +      +E G +  +V 
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA----DELGNRAEFVS 82

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
            + I GST  +G +L K        +   +R  E+V  
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ 39

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Length = 245

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 3/58 (5%)

Query: 86  TGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA 143
           TG+   +G  +A      G  V I +R  +   +  +           W+P    V  
Sbjct: 27  TGT---VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHL 81

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            ++TG++ G+G A+ +   + G  V+         +        E G    +  
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPA----AELGAAVRFRN 59

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGE 130
           ++TG+++GIG A+A      G  V+I  +  A   +     +    G+
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK 78

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
            + + G+T   G A+  E  + G  V+   R  ++    +
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL 41

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYN------VLITGSTKGIGYALAKEFLKAGDNVII-CSR 112
           A +     S       P+ P          L+TG+ +GIG  +A E  + G  VI+  + 
Sbjct: 3   AVTQPRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN 62

Query: 113 SAERVDSAVQSLREEFGE 130
           S E  +  V ++++   +
Sbjct: 63  STESAEEVVAAIKKNGSD 80

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 63  SSSSSSSSSVKREPMLPPYN--VLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDS 119
           + S+  +SS   +   P      L TG+ +GIG  +A E  + G +V++    S++  + 
Sbjct: 2   APSADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEE 61

Query: 120 AVQSLREEFGE 130
            V  L++   +
Sbjct: 62  VVAELKKLGAQ 72

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
            + I G+T   G     + ++AG  V +  R + R+ S
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS 42

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 60  ADSSSSSSSSSSVKREPMLPPYN-----VLITGSTKGIGYALAKEFLKAGDNVII-CSRS 113
             SS     + ++  + M+   +       +TG ++GIG A+AK     G  V +    +
Sbjct: 6   HHSSGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65

Query: 114 AERVDSAVQSLREEFGE 130
           AER  + V  + +  G 
Sbjct: 66  AERAQAVVSEIEQAGGR 82

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 38.0 bits (88), Expect = 5e-04
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA 120
            + I G+T   G  + +E    G  V    R+A ++   
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT 40

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 37.6 bits (88), Expect = 9e-04
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 84  LITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGE 130
           L+TGS +GIG A+A    + G  V++  + S +  +  V  ++    +
Sbjct: 22  LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD 69

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 37.7 bits (87), Expect = 9e-04
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 7/62 (11%)

Query: 65  SSSSSSSVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
           + S   S K         VLI G+T  IG  +A   L A     I +R   R  S  +  
Sbjct: 2   TVSPVPSPKG-------RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF 54

Query: 125 RE 126
           + 
Sbjct: 55  KA 56

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	167
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.72
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.72
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.66
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.66
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.65
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.64
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.62
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.61
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.61
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.6
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.59
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.58
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.58
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.58
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.57
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.57
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.57
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.57
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.57
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.57
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.57
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.57
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.57
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.57
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.56
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.56
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.56
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.56
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.56
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.56
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.56
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.56
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.56
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.56
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.55
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.55
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.55
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.55
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.55
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.54
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.54
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.54
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.54
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.54
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.54
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.54
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.54
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.53
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.53
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.53
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.53
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.53
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.52
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.52
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.52
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.52
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.52
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.52
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.52
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.52
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.52
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.52
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.52
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.52
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.52
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.51
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.51
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.51
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.51
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.51
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.51
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.51
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.51
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.51
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.51
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.51
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.51
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.51
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.5
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.5
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.5
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.5
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.5
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.5
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.5
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.5
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.5
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.5
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.5
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.5
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.5
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.49
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.49
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.49
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.49
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.49
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.49
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.49
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.49
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.49
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.49
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.49
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.49
1spx_A	278	Short-chain reductase family member (5L265); paral	99.48
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.48
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.48
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.48
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.48
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.48
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.48
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.48
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.48
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.48
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.48
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.48
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.47
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.47
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.47
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.47
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.47
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.46
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.46
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.46
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.46
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.46
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.46
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.46
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.46
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.45
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.45
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.45
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.44
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.44
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.44
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.44
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.44
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.44
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.44
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.44
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.44
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.43
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.43
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.43
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.43
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.43
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.43
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.43
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.43
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.43
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.43
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.42
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.42
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.42
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.41
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.41
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.41
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.41
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.41
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.4
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.4
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.4
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.39
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.39
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.38
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.38
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.38
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.37
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.37
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.37
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.37
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.37
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.36
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.36
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.34
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.34
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.34
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.33
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.33
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.32
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.32
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.31
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.31
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.3
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.28
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.28
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.27
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.26
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.26
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.24
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.24
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.23
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.23
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.23
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.23
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.22
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.22
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.21
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.21
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.21
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.2
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.2
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.2
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.19
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.19
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.19
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.19
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.18
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.17
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.14
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.12
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.12
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.11
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.1
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.1
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.1
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.1
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.09
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.09
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.09
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.09
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.08
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.07
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.07
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.07
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.07
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.06
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.05
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.05
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.05
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.04
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.03
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.02
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.02
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.02
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.02
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.01
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.01
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.01
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.01
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.0
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.99
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.99
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.99
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.98
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.98
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.96
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.96
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.95
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.94
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.92
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.92
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.9
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.9
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.9
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.89
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.88
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.87
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.87
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.86
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.86
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.86
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.85
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.84
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.81
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.81
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.81
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.8
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.79
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.77
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.77
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.76
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.74
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.74
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.73
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.72
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.72
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.72
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	98.71
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.71
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.7
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.7
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.7
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.68
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.68
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.64
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.64
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.63
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.62
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.61
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.6
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.59
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.57
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.56
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.55
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.55
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.52
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.5
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.49
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.49
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.47
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.43
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.43
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.39
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.38
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.36
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.36
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.31
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.3
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.28
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.27
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.25
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.22
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.19
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.17
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.16
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.15
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.15
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.12
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.02
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.01
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.98
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.96
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.94
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.93
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.92
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.91
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.91
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	97.9
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.85
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.83
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.79
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.76
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.69
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.68
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.67
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.63
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.62
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.61
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.61
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.58
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.58
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.57
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.56
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.45
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.43
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.41
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.4
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.4
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.39
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.38
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.38
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.31
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.28
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.25
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.24
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.21
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.2
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.08
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.08
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.06
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.06
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.05
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.01
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.99
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.99
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.99
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.99
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.99
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.97
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.95
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.93
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.93
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.83
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.82
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	96.81
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.79
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.78
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.75
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.73
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.73
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.7
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.68
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.67
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.66
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.65
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.6
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.59
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.57
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.56
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.55
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.53
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.52
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.51
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.5
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.5
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.5
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.48
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.45
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.43
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.42
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.4
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.4
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.4
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.4
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.38
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.32
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.32
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.32
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.31
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.31
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.25
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.23
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.22
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.19
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.19
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.12
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.1
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.06
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.04
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.03
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.02
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.98
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	95.96
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.96
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.95
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.91
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.9
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	95.89
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.89
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.88
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.88
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.87
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.85
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.85
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.84
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.84
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	95.83
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.83
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.82
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	95.8
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.8
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.8
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.78
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.75
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.75
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.75
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.73
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.73
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.69
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.69
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.68
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	95.68
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	95.68
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	95.67
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	95.67
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	95.66
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.65
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.65
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	95.65
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.63
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.62
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.61
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	95.59
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	95.58
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.56
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.55
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.54
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.54
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.54
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.48
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.48
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.47
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	95.46
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.46
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.44
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.42
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.42
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.4
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	95.39
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.37
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	95.35
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.32
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.3
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.29
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.29
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.29
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	95.28
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.27

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.72  E-value=2.9e-17  Score=129.81  Aligned_cols=88  Identities=22%  Similarity=0.173  Sum_probs=74.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~-  150 (167)
                      .+++|+||+++||||++|||+++++.|+++|++|++++|+++.+++..+++.+.++  ++.++++|++|++ .+.+ .+ 
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999977643  5899999999987 2222 11 


Q ss_pred             -----cceEEEEeccCcc
Q 031009          151 -----YSWLLVNIYVPSC  163 (167)
Q Consensus       151 -----~~dilvN~ai~~~  163 (167)
                           .+|+|||||-...
T Consensus        81 ~~~~G~iDiLVNNAG~~~   98 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQY   98 (255)
T ss_dssp             HHTTCCCCEEEECCCCCC
T ss_pred             HHHCCCCcEEEECCCCCC
Confidence                 1899999985443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.72  E-value=2.8e-17  Score=129.78  Aligned_cols=83  Identities=25%  Similarity=0.259  Sum_probs=71.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~---  150 (167)
                      ++|+||+++||||++|||+++++.|+++|++|++++|+++.++++.+++++. +. ++.++++|++|++. +.+ .+   
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~-~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GK-EVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999999999765 33 68999999999872 222 11   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|+|||||-
T Consensus        81 ~~G~iDiLVNNAG   93 (254)
T 4fn4_A           81 TYSRIDVLCNNAG   93 (254)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence               1899999984

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.66  E-value=3.3e-16  Score=123.19  Aligned_cols=86  Identities=12%  Similarity=0.005  Sum_probs=70.3

Q ss_pred             CCCCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc
Q 031009           75 EPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~  150 (167)
                      |++|+||+++|||+++  |||+++|+.|+++|++|++++|+++.++++.+++++..+. ++.++++|++|++. +. +.+
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQP-EAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCS-SCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-cEEEEEccCCCHHHHHHHHHH
Confidence            5689999999999865  9999999999999999999999999888887777655443 68899999999862 22 211


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++|||+-.
T Consensus        80 ~~~~~G~iD~lvnnAg~   96 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAF   96 (256)
T ss_dssp             HHHHHCCCSEEEECCCC
T ss_pred             HHHHhCCCCEEEecccc
Confidence                  18999998743

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.66  E-value=5e-16  Score=123.82  Aligned_cols=84  Identities=25%  Similarity=0.276  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hcc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YKY--  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~~--  151 (167)
                      .+|+||+++||||++|||+++++.|+++|++|++++|+++.+++..+++    +. ++.++++|++|++ .+.+ .+.  
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~-~~~~~~~Dv~~~~~v~~~~~~~~~   99 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GG-GAVGIQADSANLAELDRLYEKVKA   99 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-CeEEEEecCCCHHHHHHHHHHHHH
Confidence            3599999999999999999999999999999999999999888777665    33 5788999999987 2222 211  


Q ss_pred             ----ceEEEEeccCccc
Q 031009          152 ----SWLLVNIYVPSCF  164 (167)
Q Consensus       152 ----~dilvN~ai~~~~  164 (167)
                          +|+|||||--...
T Consensus       100 ~~G~iDiLVNNAG~~~~  116 (273)
T 4fgs_A          100 EAGRIDVLFVNAGGGSM  116 (273)
T ss_dssp             HHSCEEEEEECCCCCCC
T ss_pred             HcCCCCEEEECCCCCCC
Confidence                8999999854443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.65  E-value=7.5e-16  Score=121.14  Aligned_cols=84  Identities=20%  Similarity=0.173  Sum_probs=67.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--  151 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--  151 (167)
                      .++|+||+++||||++|||+++++.|+++|++|++.+|+.+  ++..+++++.. . ++.++++|++|++ .+...+.  
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g-~-~~~~~~~Dv~d~~~v~~~~~~g~   79 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG-G-NASALLIDFADPLAAKDSFTDAG   79 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT-C-CEEEEECCTTSTTTTTTSSTTTC
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC-C-cEEEEEccCCCHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999999864  34556666553 3 5899999999977 2222222  


Q ss_pred             ceEEEEeccCc
Q 031009          152 SWLLVNIYVPS  162 (167)
Q Consensus       152 ~dilvN~ai~~  162 (167)
                      +|+|||||--.
T Consensus        80 iDiLVNNAGi~   90 (247)
T 4hp8_A           80 FDILVNNAGII   90 (247)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999998543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.64  E-value=4.5e-15  Score=117.54  Aligned_cols=88  Identities=25%  Similarity=0.306  Sum_probs=73.4

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ..+.+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ .+.+.+ 
T Consensus        20 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   98 (277)
T 4fc7_A           20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR-RCLPLSMDVRAPPAVMAAVDQ   98 (277)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHH
Confidence            3455799999999999999999999999999999999999999988888888766555 7999999999986 222221 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus        99 ~~~~~g~id~lv~nAg~  115 (277)
T 4fc7_A           99 ALKEFGRIDILINCAAG  115 (277)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCcC
Confidence                  28999999853

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.62  E-value=2.7e-15  Score=118.67  Aligned_cols=84  Identities=19%  Similarity=0.127  Sum_probs=66.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~--  150 (167)
                      .++|+||+++||||++|||++++++|+++|++|++++|+.+..+ ..+++.+..+  ++.++++|++|++. +. +.+  
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQP--RATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCT--TCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCC--CEEEEEeecCCHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999887654 3455655533  58889999999862 22 221  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        79 ~~~G~iDiLVNnAGi   93 (258)
T 4gkb_A           79 ATFGRLDGLVNNAGV   93 (258)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCCCEEEECCCC
Confidence                18999999853

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.61  E-value=4.8e-15  Score=116.76  Aligned_cols=87  Identities=30%  Similarity=0.353  Sum_probs=72.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      .+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ .+.+.+  
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHH
Confidence            455789999999999999999999999999999999999999999888888765555 7999999999986 222221  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        93 ~~~~g~id~lv~nAg~  108 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGI  108 (266)
T ss_dssp             HHHHTSCSEEEEECCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence                 37899998854

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.61  E-value=4.9e-15  Score=116.46  Aligned_cols=88  Identities=24%  Similarity=0.225  Sum_probs=72.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +|++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ .+.+.+  
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG-KVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSS-CEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999999998888888655323 6899999999987 222222  


Q ss_pred             -----cceEEEEeccCc
Q 031009          151 -----YSWLLVNIYVPS  162 (167)
Q Consensus       151 -----~~dilvN~ai~~  162 (167)
                           .+|++||||-..
T Consensus        83 ~~~~g~id~lvnnAg~~   99 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVF   99 (262)
T ss_dssp             HHHHSCCSEEEECCCCC
T ss_pred             HHHhCCCCEEEECCCCC
Confidence                 389999998543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.60  E-value=7.7e-15  Score=115.44  Aligned_cols=87  Identities=26%  Similarity=0.392  Sum_probs=72.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+..++.++++|++|.+ ...+.+    
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999998888877555435899999999986 222221    


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         .+|++||||-..
T Consensus        84 ~~g~id~lvnnAg~~   98 (265)
T 3lf2_A           84 TLGCASILVNNAGQG   98 (265)
T ss_dssp             HHCSCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence               279999998543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.59  E-value=5.9e-15  Score=118.25  Aligned_cols=89  Identities=26%  Similarity=0.189  Sum_probs=72.6

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ..++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ .+.+.+ 
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG-NVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSS-CEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC-cEEEEEEeCCCHHHHHHHHHH
Confidence            3466899999999999999999999999999999999999999988888888654323 6899999999986 222221 


Q ss_pred             ------cceEEEEeccCc
Q 031009          151 ------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ------~~dilvN~ai~~  162 (167)
                            .+|++||||-..
T Consensus       113 ~~~~~g~iD~lvnnAg~~  130 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIF  130 (293)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence                  279999998543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.59  E-value=1.5e-14  Score=113.92  Aligned_cols=88  Identities=27%  Similarity=0.331  Sum_probs=73.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+...+.++.+|++|.+ .+. ..+  
T Consensus         5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g   84 (267)
T 3t4x_A            5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP   84 (267)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999999999999899887654447889999999977 222 222  


Q ss_pred             cceEEEEeccCc
Q 031009          151 YSWLLVNIYVPS  162 (167)
Q Consensus       151 ~~dilvN~ai~~  162 (167)
                      .+|++||||-..
T Consensus        85 ~id~lv~nAg~~   96 (267)
T 3t4x_A           85 KVDILINNLGIF   96 (267)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            379999988543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.58  E-value=7.6e-15  Score=115.20  Aligned_cols=88  Identities=20%  Similarity=0.252  Sum_probs=70.7

Q ss_pred             CCCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-h
Q 031009           72 VKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-Y  149 (167)
Q Consensus        72 ~~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~  149 (167)
                      ..+|..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+ .
T Consensus        21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~v~~~~~   98 (262)
T 3rkr_A           21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GG-EAESHACDLSHSDAIAAFAT   98 (262)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHH
T ss_pred             cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CC-ceeEEEecCCCHHHHHHHHH
Confidence            34566789999999999999999999999999999999999999998888888654 33 6899999999987 2222 2


Q ss_pred             c------cceEEEEeccC
Q 031009          150 K------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~------~~dilvN~ai~  161 (167)
                      .      .+|++||||-.
T Consensus        99 ~~~~~~g~id~lv~~Ag~  116 (262)
T 3rkr_A           99 GVLAAHGRCDVLVNNAGV  116 (262)
T ss_dssp             HHHHHHSCCSEEEECCCC
T ss_pred             HHHHhcCCCCEEEECCCc
Confidence            2      27899998854

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.58  E-value=1.3e-14  Score=114.15  Aligned_cols=83  Identities=16%  Similarity=0.314  Sum_probs=69.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ .+.+.+   
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GR-RALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999888888765 33 6899999999987 222222   


Q ss_pred             ----cceEEEEec
Q 031009          151 ----YSWLLVNIY  159 (167)
Q Consensus       151 ----~~dilvN~a  159 (167)
                          .+|++||||
T Consensus        84 ~~~g~id~lv~nA   96 (264)
T 3ucx_A           84 KAYGRVDVVINNA   96 (264)
T ss_dssp             HHTSCCSEEEECC
T ss_pred             HHcCCCcEEEECC
Confidence                279999998

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.58  E-value=1.3e-14  Score=116.20  Aligned_cols=86  Identities=12%  Similarity=0.149  Sum_probs=69.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhCCceEEEEeccCC
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWVPPSRLV  141 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (167)
                      ++.+++||+++||||++|||++++++|+++|++|++++|+            .+.+++..+++... +. ++.++++|++
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~   99 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GR-RIIASQVDVR   99 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TC-CEEEEECCTT
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CC-ceEEEECCCC
Confidence            3457899999999999999999999999999999999987            66777777777654 33 6899999999


Q ss_pred             Chh-hhhhhc-------cceEEEEeccC
Q 031009          142 SAP-YNIIYK-------YSWLLVNIYVP  161 (167)
Q Consensus       142 d~~-~~~~~~-------~~dilvN~ai~  161 (167)
                      |.+ ...+.+       .+|++||||-.
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            987 222221       27899988853

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.57  E-value=7.5e-15  Score=116.66  Aligned_cols=86  Identities=21%  Similarity=0.271  Sum_probs=68.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh-h-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA-P-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~-~~~~~~--  150 (167)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+. ++.++.+|++|. + ...+.+  
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC-SEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEccCCCcHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999999888888766444 799999999997 4 222221  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        86 ~~~~g~iD~lv~nAg~  101 (311)
T 3o26_A           86 KTHFGKLDILVNNAGV  101 (311)
T ss_dssp             HHHHSSCCEEEECCCC
T ss_pred             HHhCCCCCEEEECCcc
Confidence                 37899998854

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.57  E-value=1.3e-14  Score=113.60  Aligned_cols=85  Identities=15%  Similarity=0.130  Sum_probs=70.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.+    
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-GG-RIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECcCCCHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999999999988888765 33 7999999999987 222222    


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        .+|++||||-..
T Consensus        81 ~g~id~lv~nAg~~   94 (252)
T 3h7a_A           81 HAPLEVTIFNVGAN   94 (252)
T ss_dssp             HSCEEEEEECCCCC
T ss_pred             hCCceEEEECCCcC
Confidence              379999998543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.57  E-value=9.4e-15  Score=115.91  Aligned_cols=88  Identities=16%  Similarity=0.100  Sum_probs=72.6

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      .+.++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++.... . ++.++++|++|.+ .+.+.+ 
T Consensus        25 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~Dl~d~~~v~~~~~~  102 (276)
T 3r1i_A           25 LDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-G-KALPIRCDVTQPDQVRGMLDQ  102 (276)
T ss_dssp             GGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-C-CCEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-C-eEEEEEcCCCCHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999999988888886643 3 5888999999987 222222 


Q ss_pred             ------cceEEEEeccCc
Q 031009          151 ------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ------~~dilvN~ai~~  162 (167)
                            .+|++||||-..
T Consensus       103 ~~~~~g~iD~lvnnAg~~  120 (276)
T 3r1i_A          103 MTGELGGIDIAVCNAGIV  120 (276)
T ss_dssp             HHHHHSCCSEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence                  389999988543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.57  E-value=1.3e-14  Score=114.54  Aligned_cols=84  Identities=23%  Similarity=0.310  Sum_probs=70.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      |+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+     
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GG-TALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999888888665 33 6889999999986 222221     


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        .+|++||||-..
T Consensus        79 ~g~iD~lVnnAG~~   92 (264)
T 3tfo_A           79 WGRIDVLVNNAGVM   92 (264)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              279999998543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.57  E-value=2e-14  Score=112.65  Aligned_cols=85  Identities=24%  Similarity=0.297  Sum_probs=71.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ .+.+.+   
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GG-KAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999998888888664 33 6899999999986 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        85 ~~~g~id~lv~nAg~   99 (256)
T 3gaf_A           85 DQFGKITVLVNNAGG   99 (256)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence                37999999854

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.57  E-value=2.4e-14  Score=112.84  Aligned_cols=87  Identities=23%  Similarity=0.293  Sum_probs=69.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++.+|++|.+ ...+.+  
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   93 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAV   93 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999998888877777444344 6888999999976 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        94 ~~~~g~iD~lvnnAg~  109 (267)
T 1vl8_A           94 KEKFGKLDTVVNAAGI  109 (267)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence                 37999998854

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.57  E-value=4.5e-14  Score=112.66  Aligned_cols=86  Identities=29%  Similarity=0.313  Sum_probs=66.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ...+++||+++||||++|||++++++|+++|++|++++|+.+...+...++....+. ++.++++|++|.+ .+.+.+  
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999877544433433333344 6899999999986 222221  


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus       120 ~~~~g~iD~lvnnAg  134 (291)
T 3ijr_A          120 VRQLGSLNILVNNVA  134 (291)
T ss_dssp             HHHHSSCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence                 2799999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.57  E-value=1.1e-14  Score=115.14  Aligned_cols=86  Identities=26%  Similarity=0.265  Sum_probs=71.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.+   
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-GH-DAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TC-CEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999999999999888888664 33 5899999999987 222222   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        99 ~~~g~iD~lv~nAg~~  114 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQ  114 (271)
T ss_dssp             HHTCCCCEEEECCCCC
T ss_pred             HHCCCCCEEEECCCCC
Confidence                279999998543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.57  E-value=2.4e-14  Score=113.23  Aligned_cols=86  Identities=19%  Similarity=0.163  Sum_probs=70.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.... . ++.++.+|++|.+ .+.+.+  
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-L-EGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT-C-CCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-C-cEEEEEEeCCCHHHHHHHHHHH
Confidence            3446899999999999999999999999999999999999999988888887653 3 5788999999986 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus       100 ~~~~g~iD~lvnnAg~  115 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGI  115 (270)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence                 27999999853

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.57  E-value=2.3e-14  Score=113.23  Aligned_cols=87  Identities=24%  Similarity=0.296  Sum_probs=68.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ..+.+++|+++||||++|||++++++|+++|++|++.+| +.+..++..+++... +. ++.++++|++|.+ .+.+.+ 
T Consensus        22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~d~~~v~~~~~~   99 (269)
T 4dmm_A           22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GG-EAFAVKADVSQESEVEALFAA   99 (269)
T ss_dssp             --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999999998 666677777777654 33 6889999999987 222222 


Q ss_pred             ------cceEEEEeccCc
Q 031009          151 ------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ------~~dilvN~ai~~  162 (167)
                            .+|++||||-..
T Consensus       100 ~~~~~g~id~lv~nAg~~  117 (269)
T 4dmm_A          100 VIERWGRLDVLVNNAGIT  117 (269)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence                  379999998543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.56  E-value=1.5e-14  Score=115.02  Aligned_cols=85  Identities=21%  Similarity=0.227  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ..++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. .+.++++|++|.+ .+.+.+    
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN-IVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-eEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999999999888888776554 5689999999987 222221    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus       108 ~~g~iD~lvnnAG~  121 (281)
T 4dry_A          108 EFARLDLLVNNAGS  121 (281)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence               27999998853

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.56  E-value=2.7e-14  Score=115.49  Aligned_cols=88  Identities=19%  Similarity=0.249  Sum_probs=73.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.......++.++.+|++|.+ ...+.+   
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4468899999999999999999999999999999999999999998888877654336899999999986 222222   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        83 ~~~g~id~lv~nAg~~   98 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVN   98 (319)
T ss_dssp             HHTCCEEEEEECCCCC
T ss_pred             HhCCCCCEEEECCCcC
Confidence                269999998643

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.56  E-value=3.7e-14  Score=111.14  Aligned_cols=88  Identities=22%  Similarity=0.179  Sum_probs=71.9

Q ss_pred             CCCCCCCCEEEEeCCC-CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas-~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      .++++++|+++||||+ +|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ .+.+.+ 
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG-RVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSS-CEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCC-ceEEEEeCCCCHHHHHHHHHH
Confidence            4567999999999997 59999999999999999999999999998888888655333 7999999999986 222222 


Q ss_pred             ------cceEEEEeccCc
Q 031009          151 ------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ------~~dilvN~ai~~  162 (167)
                            .+|++||||-..
T Consensus        95 ~~~~~g~id~li~~Ag~~  112 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLG  112 (266)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCCcEEEECCCcC
Confidence                  279999988543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.56  E-value=1.7e-14  Score=114.23  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=70.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCC-ceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...... .++.++++|++|.+ ...+.+ 
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999999999999998888888654321 26889999999986 222221 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus        85 ~~~~~g~id~lv~nAg~  101 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCc
Confidence                  27899998853

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.56  E-value=2.6e-14  Score=111.64  Aligned_cols=85  Identities=20%  Similarity=0.234  Sum_probs=70.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccC--CChh-hhhhhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRL--VSAP-YNIIYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv--~d~~-~~~~~~--  150 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++.+|+  +|.+ .+.+.+  
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC-CCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CceEEEEecccCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999988888776654 578899999  7765 222221  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        87 ~~~~g~id~lv~nAg~  102 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGL  102 (252)
T ss_dssp             HHHCSCCSEEEECCCC
T ss_pred             HHhCCCCCEEEECCcc
Confidence                 27899998853

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.56  E-value=2.6e-14  Score=112.34  Aligned_cols=87  Identities=17%  Similarity=0.145  Sum_probs=69.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.......++.++++|++|.+ ...+.+   
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999999888888777765422236889999999976 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        88 ~~~g~id~lv~nAg~  102 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGI  102 (267)
T ss_dssp             HHHSCCSEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence                27999998853

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.56  E-value=1.9e-14  Score=114.09  Aligned_cols=86  Identities=29%  Similarity=0.361  Sum_probs=66.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+   
T Consensus        19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~   96 (279)
T 3sju_A           19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-GH-DVDGSSCDVTSTDEVHAAVAAAV   96 (279)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHHHHHH
Confidence            33688999999999999999999999999999999999999998888888654 33 6899999999987 222221   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        97 ~~~g~id~lv~nAg~~  112 (279)
T 3sju_A           97 ERFGPIGILVNSAGRN  112 (279)
T ss_dssp             HHHCSCCEEEECCCCC
T ss_pred             HHcCCCcEEEECCCCC
Confidence                279999998543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.56  E-value=1.4e-14  Score=115.34  Aligned_cols=86  Identities=19%  Similarity=0.126  Sum_probs=67.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-  150 (167)
                      .++.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ .+. +.+ 
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GG-QAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999988888887654 33 6899999999986 222 221 


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus       100 ~~~~g~iD~lVnnAg~  115 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGI  115 (283)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCCCEEEECCCC
Confidence                 27899998853

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.56  E-value=2.3e-14  Score=111.46  Aligned_cols=84  Identities=19%  Similarity=0.216  Sum_probs=69.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+   
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GG-TAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-EEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999998888888654 33 6899999999986 222222   


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++||||-
T Consensus        82 ~~~g~id~li~~Ag   95 (253)
T 3qiv_A           82 AEFGGIDYLVNNAA   95 (253)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence                3789999884

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.56  E-value=3.2e-14  Score=112.44  Aligned_cols=86  Identities=14%  Similarity=0.160  Sum_probs=68.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhCCceEEEEeccCC
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWVPPSRLV  141 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (167)
                      +|.+++||+++||||++|||++++++|+++|++|++++|+            .+.+++...++... +. ++.++++|++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~   81 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GR-KAYTAEVDVR   81 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TS-CEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CC-ceEEEEccCC
Confidence            3567999999999999999999999999999999999987            66666666666554 33 6899999999


Q ss_pred             Chh-hhhhhc-------cceEEEEeccC
Q 031009          142 SAP-YNIIYK-------YSWLLVNIYVP  161 (167)
Q Consensus       142 d~~-~~~~~~-------~~dilvN~ai~  161 (167)
                      |.+ ...+.+       .+|++||||-.
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~  109 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGI  109 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            986 222222       37999998854

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.55  E-value=2.5e-14  Score=111.77  Aligned_cols=85  Identities=21%  Similarity=0.250  Sum_probs=70.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCC-ceEEEEeccCCChh-hhh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. .++.++++|++|.+ ... +..   
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999888888765322 36889999999976 222 221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        84 ~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 KYGAVDILVNAAAM   97 (250)
T ss_dssp             HHCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence               27999999854

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.55  E-value=5.3e-14  Score=111.37  Aligned_cols=86  Identities=27%  Similarity=0.344  Sum_probs=70.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +|.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.+  
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GV-EADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEECCCCCHHHHHHHHHHH
Confidence            444689999999999999999999999999999999999998888877777654 33 5888999999976 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           ..|++||||-.
T Consensus        94 ~~~~g~iD~lv~~Ag~  109 (277)
T 2rhc_B           94 VERYGPVDVLVNNAGR  109 (277)
T ss_dssp             HHHTCSCSEEEECCCC
T ss_pred             HHHhCCCCEEEECCCC
Confidence                 27999998853

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.55  E-value=5.5e-14  Score=110.12  Aligned_cols=85  Identities=28%  Similarity=0.429  Sum_probs=69.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....+. ++.++++|++|.+ ...+.+    
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888887777654344 6889999999986 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        82 ~~g~id~lv~~Ag~   95 (263)
T 3ai3_A           82 SFGGADILVNNAGT   95 (263)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence               37999998853

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.55  E-value=3.6e-14  Score=112.00  Aligned_cols=86  Identities=17%  Similarity=0.199  Sum_probs=68.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      +..++||+++||||++|||++++++|+++|++|++++|+            .+.+++..+++... +. ++.++++|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GS-RIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TC-CEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CC-eEEEEeCCCCC
Confidence            457899999999999999999999999999999999987            66677776766654 33 69999999999


Q ss_pred             hh-hhhhhc-------cceEEEEeccCc
Q 031009          143 AP-YNIIYK-------YSWLLVNIYVPS  162 (167)
Q Consensus       143 ~~-~~~~~~-------~~dilvN~ai~~  162 (167)
                      .+ .+.+.+       .+|++||||-..
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~  113 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIA  113 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            87 222222       379999998543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.55  E-value=5.2e-14  Score=108.32  Aligned_cols=83  Identities=23%  Similarity=0.276  Sum_probs=69.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-------  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-------  150 (167)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ ...+.+       
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999999999888888755555 7999999999987 222222       


Q ss_pred             cceEEEEeccCc
Q 031009          151 YSWLLVNIYVPS  162 (167)
Q Consensus       151 ~~dilvN~ai~~  162 (167)
                      .+|++||||-..
T Consensus        80 ~id~li~~Ag~~   91 (235)
T 3l77_A           80 DVDVVVANAGLG   91 (235)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            378999998543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.54  E-value=1.4e-14  Score=115.15  Aligned_cols=84  Identities=17%  Similarity=0.172  Sum_probs=69.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +.+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+   
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GG-EAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-TC-CEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999988888877543 33 6899999999986 222222   


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          .+|++||||-
T Consensus        81 ~~~g~iD~lvnnAg   94 (280)
T 3tox_A           81 RRFGGLDTAFNNAG   94 (280)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence                2789999885

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.54  E-value=2.3e-14  Score=112.26  Aligned_cols=83  Identities=20%  Similarity=0.316  Sum_probs=68.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ .+.+.+     
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PG-QILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-TT-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988887777543 33 6899999999986 222222     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        81 ~g~id~lv~nAg~   93 (257)
T 3imf_A           81 FGRIDILINNAAG   93 (257)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              27999999853

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.54  E-value=3.4e-14  Score=112.11  Aligned_cols=83  Identities=25%  Similarity=0.265  Sum_probs=67.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      .++.++||+++||||++|||++++++|+++|++|++.+|+.+.+++..+++    +. ++.++++|++|.+ .+.+.+  
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GK-DVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CS-SEEEEECCTTSHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceEEEEeecCCHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999998877665543    43 6899999999987 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        96 ~~~~g~iD~lvnnAg~  111 (266)
T 3grp_A           96 EREMEGIDILVNNAGI  111 (266)
T ss_dssp             HHHHTSCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence                 37999998854

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.54  E-value=4.3e-14  Score=111.90  Aligned_cols=87  Identities=17%  Similarity=0.219  Sum_probs=68.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-------------ChhHHHHHHHHHHHHhCCceEEEEeccC
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------SAERVDSAVQSLREEFGEQHVWVPPSRL  140 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (167)
                      .+.+++||+++||||++|||++++++|+++|++|++++|             +.+.+++..+++... +. ++.++++|+
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv   86 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GR-KALTRVLDV   86 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-TC-CEEEEECCT
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CC-eEEEEEcCC
Confidence            455799999999999999999999999999999999998             667777777777554 33 689999999


Q ss_pred             CChh-hhhhhc-------cceEEEEeccCc
Q 031009          141 VSAP-YNIIYK-------YSWLLVNIYVPS  162 (167)
Q Consensus       141 ~d~~-~~~~~~-------~~dilvN~ai~~  162 (167)
                      +|.+ .+.+.+       .+|++||||-..
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~  116 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVL  116 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            9987 222221       379999998543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.54  E-value=6.5e-14  Score=110.77  Aligned_cols=87  Identities=18%  Similarity=0.244  Sum_probs=67.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhCCceEEEEeccCC
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWVPPSRLV  141 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (167)
                      .|.++++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++... +. ++.++++|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GR-RCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-TC-CEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-CC-eEEEEeCCCC
Confidence            3557899999999999999999999999999999999997            55666666666544 33 6899999999


Q ss_pred             Chh-hhhhhc-------cceEEEEeccCc
Q 031009          142 SAP-YNIIYK-------YSWLLVNIYVPS  162 (167)
Q Consensus       142 d~~-~~~~~~-------~~dilvN~ai~~  162 (167)
                      |.+ .+.+.+       .+|++||||-..
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~  110 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGIS  110 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            986 222222       389999998543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.54  E-value=5e-15  Score=116.15  Aligned_cols=76  Identities=22%  Similarity=0.275  Sum_probs=61.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhcc--c
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYKY--S  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~~--~  152 (167)
                      .++||+++||||++|||++++++|+++|++|++++|+.+.+++.       .+. ++..+++|++|++  ++.+.++  +
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-------~~~-~~~~~~~Dv~~~~~v~~~~~~~g~i   79 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-------RHP-RIRREELDITDSQRLQRLFEALPRL   79 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-------CCT-TEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-------hcC-CeEEEEecCCCHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999999998765421       122 6889999999987  2223333  8


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |+|||||-
T Consensus        80 DiLVNNAG   87 (242)
T 4b79_A           80 DVLVNNAG   87 (242)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999983

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.54  E-value=4e-14  Score=112.30  Aligned_cols=85  Identities=11%  Similarity=0.119  Sum_probs=67.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC----------------hhHHHHHHHHHHHHhCCceEEEEec
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------------AERVDSAVQSLREEFGEQHVWVPPS  138 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~  138 (167)
                      +..++||+++||||++|||++++++|+++|++|++++|+                .+.+++..+++... +. ++.++++
T Consensus         6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~   83 (286)
T 3uve_A            6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-NR-RIVTAEV   83 (286)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-TC-CEEEEEC
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-CC-ceEEEEc
Confidence            456899999999999999999999999999999999987                66676666666543 33 6899999


Q ss_pred             cCCChh-hhhhhc-------cceEEEEeccC
Q 031009          139 RLVSAP-YNIIYK-------YSWLLVNIYVP  161 (167)
Q Consensus       139 Dv~d~~-~~~~~~-------~~dilvN~ai~  161 (167)
                      |++|.+ .+.+.+       .+|++||||-.
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            999986 222221       37999998854

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.54  E-value=1.1e-13  Score=110.60  Aligned_cols=87  Identities=22%  Similarity=0.220  Sum_probs=66.4

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh--hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY  149 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~  149 (167)
                      ..+++++||+++||||++|||++++++|+++|++|++++|+.  +..++..++++.. +. ++.++++|++|.+ .+.+.
T Consensus        42 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~  119 (294)
T 3r3s_A           42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-GR-KAVLLPGDLSDESFARSLV  119 (294)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-TC-CEEECCCCTTSHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-CC-cEEEEEecCCCHHHHHHHH
Confidence            345678999999999999999999999999999999999873  3445555555433 43 6899999999976 22222


Q ss_pred             c-------cceEEEEeccC
Q 031009          150 K-------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~-------~~dilvN~ai~  161 (167)
                      +       .+|++||||-.
T Consensus       120 ~~~~~~~g~iD~lv~nAg~  138 (294)
T 3r3s_A          120 HKAREALGGLDILALVAGK  138 (294)
T ss_dssp             HHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            1       27899998853

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.53  E-value=6.7e-14  Score=110.58  Aligned_cols=86  Identities=15%  Similarity=0.136  Sum_probs=68.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-------------ChhHHHHHHHHHHHHhCCceEEEEeccCC
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-------------SAERVDSAVQSLREEFGEQHVWVPPSRLV  141 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (167)
                      +.+++||+++||||++|||++++++|+++|++|++++|             +.+.+++..+++... +. ++.++.+|++
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~   83 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NR-RIVAAVVDTR   83 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-TC-CEEEEECCTT
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CC-eEEEEECCCC
Confidence            44789999999999999999999999999999999998             566777777776554 33 6899999999


Q ss_pred             Chh-hhhh-hc------cceEEEEeccCc
Q 031009          142 SAP-YNII-YK------YSWLLVNIYVPS  162 (167)
Q Consensus       142 d~~-~~~~-~~------~~dilvN~ai~~  162 (167)
                      |.+ ...+ .+      .+|++||||-..
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~  112 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVA  112 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            987 2222 22      289999998543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.53  E-value=7.7e-14  Score=111.83  Aligned_cols=86  Identities=17%  Similarity=0.174  Sum_probs=71.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +..++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+   
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~  103 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GF-DAHGVVCDVRHLDEMVRLADEAF  103 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHH
Confidence            44589999999999999999999999999999999999999999888888765 33 6899999999987 222222   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus       104 ~~~g~id~lvnnAg~~  119 (301)
T 3tjr_A          104 RLLGGVDVVFSNAGIV  119 (301)
T ss_dssp             HHHSSCSEEEECCCCC
T ss_pred             HhCCCCCEEEECCCcC
Confidence                378999998543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.53  E-value=4.8e-14  Score=109.89  Aligned_cols=83  Identities=24%  Similarity=0.302  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      .+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ .+.+.+    
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GK-KARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CT-TEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999998887766665    33 6899999999987 222222    


Q ss_pred             ---cceEEEEeccCcc
Q 031009          151 ---YSWLLVNIYVPSC  163 (167)
Q Consensus       151 ---~~dilvN~ai~~~  163 (167)
                         .+|++||||-...
T Consensus        77 ~~g~id~lv~nAg~~~   92 (247)
T 3rwb_A           77 LTGGIDILVNNASIVP   92 (247)
T ss_dssp             HHSCCSEEEECCCCCC
T ss_pred             HCCCCCEEEECCCCCC
Confidence               2799999986443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.53  E-value=7.3e-14  Score=112.79  Aligned_cols=87  Identities=18%  Similarity=0.242  Sum_probs=68.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC------------hhHHHHHHHHHHHHhCCceEEEEeccCC
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------------AERVDSAVQSLREEFGEQHVWVPPSRLV  141 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (167)
                      ++.+++||+++||||++|||++++++|+++|++|++++|+            .+.+++..+++... +. ++.++++|++
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~  117 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GR-RIIARQADVR  117 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-TC-CEEEEECCTT
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-CC-eEEEEECCCC
Confidence            4567999999999999999999999999999999999886            56666666666554 33 6899999999


Q ss_pred             Chh-hhhhhc-------cceEEEEeccCc
Q 031009          142 SAP-YNIIYK-------YSWLLVNIYVPS  162 (167)
Q Consensus       142 d~~-~~~~~~-------~~dilvN~ai~~  162 (167)
                      |.+ .+.+.+       .+|++||||-..
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~  146 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGIS  146 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            987 222222       279999998543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.53  E-value=1.2e-14  Score=116.14  Aligned_cols=86  Identities=30%  Similarity=0.394  Sum_probs=71.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCC---eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~---~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~  150 (167)
                      ..++||+++||||++|||++++++|+++|+   +|++++|+.+.++++.+++....+..++.++++|++|.+ .+. +.+
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            358899999999999999999999999998   999999999999999888877644447999999999987 222 222


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus       109 ~~~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGK  125 (287)
T ss_dssp             SCGGGCSCCEEEECCCC
T ss_pred             HHHhcCCCCEEEECCCc
Confidence                  27999998853

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.52  E-value=7.1e-14  Score=108.98  Aligned_cols=83  Identities=22%  Similarity=0.162  Sum_probs=67.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +++++||+++||||++|||++++++|+++|++|++++|+++.+++..+++..     ...++++|++|.+ .+.+.+   
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888777666532     4678999999987 222222   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        79 ~~~g~iD~lv~nAg~~   94 (248)
T 3op4_A           79 DEFGGVDILVNNAGIT   94 (248)
T ss_dssp             HHHCCCSEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                379999988543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.52  E-value=8.9e-14  Score=110.32  Aligned_cols=85  Identities=21%  Similarity=0.202  Sum_probs=67.6

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ .+.+.+ 
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~d~~~v~~~~~~   94 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GS-KAFGVRVDVSSAKDAESMVEK   94 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999998877666553    33 5889999999986 222222 


Q ss_pred             ------cceEEEEeccCc
Q 031009          151 ------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ------~~dilvN~ai~~  162 (167)
                            .+|++||||-..
T Consensus        95 ~~~~~g~iD~lv~nAg~~  112 (277)
T 4dqx_A           95 TTAKWGRVDVLVNNAGFG  112 (277)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCcC
Confidence                  379999998543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.52  E-value=1e-13  Score=108.56  Aligned_cols=84  Identities=26%  Similarity=0.358  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-----  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-----  149 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ .+.+.     
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GF-KVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998888877777654 33 6889999999976 22221     


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ...|++||||-.
T Consensus        83 ~~~g~id~lv~~Ag~   97 (260)
T 2ae2_A           83 HFHGKLNILVNNAGI   97 (260)
T ss_dssp             HTTTCCCEEEECCCC
T ss_pred             HcCCCCCEEEECCCC
Confidence               247999999854

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.52  E-value=8.8e-14  Score=107.77  Aligned_cols=84  Identities=20%  Similarity=0.250  Sum_probs=69.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..++++.. +. ++.++.+|++|.+ .+.+. +    
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GF-KARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988888888665 33 6899999999986 22222 2    


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        .+|++||||-..
T Consensus        80 ~~~id~li~~Ag~~   93 (247)
T 3lyl_A           80 NLAIDILVNNAGIT   93 (247)
T ss_dssp             TCCCSEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              278999988543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.52  E-value=8.4e-14  Score=109.03  Aligned_cols=83  Identities=25%  Similarity=0.305  Sum_probs=67.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ ...+.+   
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GP-AAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-CceEEEeeCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998887766665    33 5789999999987 222222   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        78 ~~~g~id~lv~~Ag~~   93 (259)
T 4e6p_A           78 EHAGGLDILVNNAALF   93 (259)
T ss_dssp             HHSSSCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCcC
Confidence                389999998543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.52  E-value=7.8e-14  Score=109.07  Aligned_cols=84  Identities=30%  Similarity=0.326  Sum_probs=68.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+    
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GL-SVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877777654 33 5888999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        88 ~~g~iD~lv~~Ag~  101 (260)
T 2zat_A           88 LHGGVDILVSNAAV  101 (260)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence               37899998853

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.52  E-value=1e-13  Score=110.09  Aligned_cols=85  Identities=21%  Similarity=0.204  Sum_probs=68.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +..+++|+++||||++|||++++++|+++|++|+++++ +.+.+++..+++... +. ++.++++|++|.+ ...+.+  
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-GA-RVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-TC-CEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHH
Confidence            44688999999999999999999999999999999995 777777777777654 33 6899999999986 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus       102 ~~~~g~iD~lvnnAg~  117 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHHHSCCCEEEEECC-
T ss_pred             HHHcCCCCEEEECCCc
Confidence                 37999998853

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.52  E-value=1.2e-13  Score=107.59  Aligned_cols=83  Identities=27%  Similarity=0.266  Sum_probs=68.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ .+.+.+     
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GA-KVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999888888887654 33 6889999999976 222221     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus        82 ~g~id~lv~nAg~   94 (247)
T 2jah_A           82 LGGLDILVNNAGI   94 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              37899998853

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.52  E-value=5.9e-14  Score=111.48  Aligned_cols=87  Identities=22%  Similarity=0.271  Sum_probs=68.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +.++++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++....+. ++.++++|++|.+ ...+.+  
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSG-TVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSS-CEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCC-cEEEEeCCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999 666777777777554333 6899999999986 222222  


Q ss_pred             -----cceEEEEeccCc
Q 031009          151 -----YSWLLVNIYVPS  162 (167)
Q Consensus       151 -----~~dilvN~ai~~  162 (167)
                           .+|++||||-..
T Consensus        99 ~~~~g~iD~lv~nAg~~  115 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQ  115 (281)
T ss_dssp             HHHTSSCSEEEECCCCC
T ss_pred             HHHCCCCCEEEECCCCC
Confidence                 379999998543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.52  E-value=1.7e-13  Score=109.00  Aligned_cols=87  Identities=14%  Similarity=0.205  Sum_probs=71.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +..++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ ...+.+  
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCHHHHHHHHHHH
Confidence            344689999999999999999999999999999999999998888888888765444 6899999999976 222221  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        99 ~~~~g~id~li~~Ag~  114 (302)
T 1w6u_A           99 IKVAGHPNIVINNAAG  114 (302)
T ss_dssp             HHHTCSCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence                 25999998853

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.52  E-value=6.5e-14  Score=110.67  Aligned_cols=82  Identities=16%  Similarity=0.158  Sum_probs=66.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      .+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ ...+.+  
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~-~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GN-RAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CC-ceEEEEcCCCCHHHHHHHHHHH
Confidence            455789999999999999999999999999999999999998887776665    33 6899999999987 222221  


Q ss_pred             ----cceEEEEe-cc
Q 031009          151 ----YSWLLVNI-YV  160 (167)
Q Consensus       151 ----~~dilvN~-ai  160 (167)
                          ..|++||| |.
T Consensus        99 ~~~~~id~lv~~aag  113 (281)
T 3ppi_A           99 NQLGRLRYAVVAHGG  113 (281)
T ss_dssp             TTSSEEEEEEECCCC
T ss_pred             HHhCCCCeEEEccCc
Confidence                26888888 53

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.52  E-value=7.3e-14  Score=109.43  Aligned_cols=83  Identities=17%  Similarity=0.211  Sum_probs=66.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~---  150 (167)
                      |..++||+++||||++|||++++++|+++|++|++++|+++.+++..+++    +. ++.++++|++|.+. ..+.+   
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~   77 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GP-RVHALRSDIADLNEIAVLGAAAG   77 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-cceEEEccCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999998887766655    22 68999999999862 22211   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        78 ~~~g~id~lv~nAg~~   93 (255)
T 4eso_A           78 QTLGAIDLLHINAGVS   93 (255)
T ss_dssp             HHHSSEEEEEECCCCC
T ss_pred             HHhCCCCEEEECCCCC
Confidence                279999998543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.52  E-value=5.5e-14  Score=111.83  Aligned_cols=82  Identities=23%  Similarity=0.311  Sum_probs=68.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ++++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++    +. ++.++++|++|.+ ...+.+  
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AG-QVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----SS-EEEEEECCTTCHHHHHHHHHTC
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cC-CeeEEEcCCCCHHHHHHHHHhc
Confidence            456799999999999999999999999999999999999998877665554    33 7999999999987 333333  


Q ss_pred             -cceEEEEecc
Q 031009          151 -YSWLLVNIYV  160 (167)
Q Consensus       151 -~~dilvN~ai  160 (167)
                       .+|++||||-
T Consensus        85 ~~iD~lv~nAg   95 (291)
T 3rd5_A           85 SGADVLINNAG   95 (291)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence             3689999884

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.51  E-value=7.4e-14  Score=109.29  Aligned_cols=84  Identities=21%  Similarity=0.260  Sum_probs=68.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+. +++..+++....+. ++.++.+|++|.+ ...+.+    
T Consensus         1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999887 77777777654343 6889999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        80 ~~g~iD~lv~~Ag~   93 (260)
T 1x1t_A           80 QMGRIDILVNNAGI   93 (260)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence               37999998853

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.51  E-value=7.1e-14  Score=111.92  Aligned_cols=88  Identities=25%  Similarity=0.271  Sum_probs=69.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-CceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      .++.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+ ..++.++.+|++|.+ ...+.+ 
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999988888788765432 015888999999986 222222 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus       100 ~~~~~g~iD~lvnnAG~  116 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGA  116 (297)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHhcCCCCEEEECCCc
Confidence                  37999998853

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.51  E-value=4.5e-14  Score=110.98  Aligned_cols=77  Identities=22%  Similarity=0.269  Sum_probs=60.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~------~  151 (167)
                      +|+++||||++|||++++++|+++|++|++++|+++.+++..+    +.+  ++.++++|++|++ .+.+. +      .
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~--~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERP--NLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCT--TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcC--CEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4899999999999999999999999999999999877654433    222  5888999999986 22221 1      1


Q ss_pred             ceEEEEeccCc
Q 031009          152 SWLLVNIYVPS  162 (167)
Q Consensus       152 ~dilvN~ai~~  162 (167)
                      +|+|||||-..
T Consensus        76 iDiLVNNAG~~   86 (247)
T 3ged_A           76 IDVLVNNACRG   86 (247)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999998543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.51  E-value=5.6e-14  Score=110.90  Aligned_cols=83  Identities=19%  Similarity=0.212  Sum_probs=67.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +..++||+++||||++|||++++++|+++|++|++++|+++.+++..+++    +. ++.++.+|++|.+ ...+.+   
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GR-GAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CT-TCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-CeEEEECCCCCHHHHHHHHHHHH
Confidence            44789999999999999999999999999999999999998887776665    33 5788999999986 222222   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        81 ~~~g~id~lv~nAg~~   96 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHS   96 (271)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                379999988543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.51  E-value=8.9e-14  Score=110.39  Aligned_cols=83  Identities=19%  Similarity=0.182  Sum_probs=66.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ ...+.+   
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~d~~~v~~~~~~~~   98 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GC-GAAACRVDVSDEQQIIAMVDACV   98 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CS-SCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC-cceEEEecCCCHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999998887766655    33 5888999999986 222221   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        99 ~~~g~iD~lvnnAg~~  114 (277)
T 3gvc_A           99 AAFGGVDKLVANAGVV  114 (277)
T ss_dssp             HHHSSCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                279999998543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.51  E-value=1.8e-13  Score=107.11  Aligned_cols=86  Identities=16%  Similarity=0.248  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+..++.++.+|++|.+ ...+.+    
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999888888777764311225888999999986 222221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus        83 ~~gid~lv~~Ag~   95 (260)
T 2z1n_A           83 LGGADILVYSTGG   95 (260)
T ss_dssp             TTCCSEEEECCCC
T ss_pred             hcCCCEEEECCCC
Confidence              17999998853

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.51  E-value=9.8e-14  Score=110.21  Aligned_cols=87  Identities=24%  Similarity=0.261  Sum_probs=67.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCC----hh-hhh
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVS----AP-YNI  147 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d----~~-~~~  147 (167)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+. +.+++..+++....+. ++.++++|++|    .+ ...
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN-TAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSCSTTHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCC-ceEEEEeecCCccCCHHHHHH
Confidence            34468899999999999999999999999999999999998 8888877777644344 68999999999    55 222


Q ss_pred             hhc-------cceEEEEeccC
Q 031009          148 IYK-------YSWLLVNIYVP  161 (167)
Q Consensus       148 ~~~-------~~dilvN~ai~  161 (167)
                      +.+       .+|++||||-.
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            221       37999998853

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.51  E-value=1.9e-13  Score=107.90  Aligned_cols=84  Identities=31%  Similarity=0.394  Sum_probs=69.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-----  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-----  149 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.     
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GL-NVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888887777654 33 5889999999986 22221     


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ..+|++||||-.
T Consensus        95 ~~~g~id~lv~nAg~  109 (273)
T 1ae1_A           95 VFDGKLNILVNNAGV  109 (273)
T ss_dssp             HTTSCCCEEEECCCC
T ss_pred             HcCCCCcEEEECCCC
Confidence               247999999854

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.51  E-value=7.5e-14  Score=110.46  Aligned_cols=85  Identities=29%  Similarity=0.299  Sum_probs=68.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-CceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+ ..++.++++|++|.+ .+.+.+    
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999888887777754322 115888999999976 222221    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        83 ~~g~iD~lv~nAg~   96 (280)
T 1xkq_A           83 QFGKIDVLVNNAGA   96 (280)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence               27999998853

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.51  E-value=6.5e-14  Score=109.84  Aligned_cols=84  Identities=21%  Similarity=0.280  Sum_probs=66.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +++++||+++||||++|||++++++|+++|++|+++ +++.+..++..+++... +. ++.++++|++|.+ .+.+.+  
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GR-SALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-TS-CCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-ceEEEEcCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999998 66677777777777544 33 5889999999986 222222  


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        81 ~~~~g~id~lv~nAg   95 (259)
T 3edm_A           81 ADKFGEIHGLVHVAG   95 (259)
T ss_dssp             HHHHCSEEEEEECCC
T ss_pred             HHHhCCCCEEEECCC
Confidence                 3799999883

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.51  E-value=1.4e-13  Score=106.82  Aligned_cols=83  Identities=25%  Similarity=0.355  Sum_probs=67.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++| +++.+++..+++... +. ++.++++|++|.+ .+.+.+    
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GS-DAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999 888887777777654 33 5888999999986 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        79 ~~g~id~lv~nAg~   92 (246)
T 2uvd_A           79 VFGQVDILVNNAGV   92 (246)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence               37999998854

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.51  E-value=9.2e-14  Score=109.03  Aligned_cols=82  Identities=22%  Similarity=0.290  Sum_probs=66.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .++|+++||||++|||++++++|+++|++|++. +|+.+.+++..+++... +. ++.++++|++|.+ .+.+.+     
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GV-KVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999996 89988888888887654 33 6899999999987 222222     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        80 ~g~id~lv~nAg~   92 (258)
T 3oid_A           80 FGRLDVFVNNAAS   92 (258)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              26999999853

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.51  E-value=1.2e-13  Score=110.11  Aligned_cols=69  Identities=19%  Similarity=0.204  Sum_probs=57.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      |+++++|+++||||++|||++++++|+++|++|++++ |+.+.+++..+++....+. ++.++++|++|.+
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~   73 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVA   73 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSC
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCC-eeEEEEeecCCcc
Confidence            4568999999999999999999999999999999999 9998888888888634343 6889999999865

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.50  E-value=1.1e-13  Score=108.57  Aligned_cols=82  Identities=21%  Similarity=0.157  Sum_probs=67.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.+     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GV-EARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888877777544 33 5889999999986 222211     


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||||-
T Consensus        82 ~g~id~lv~nAg   93 (262)
T 1zem_A           82 FGKIDFLFNNAG   93 (262)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCCCEEEECCC
Confidence              3799999884

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.50  E-value=9.4e-14  Score=110.08  Aligned_cols=84  Identities=24%  Similarity=0.196  Sum_probs=70.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.+    
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-GG-TAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-TC-CEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CC-eEEEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999888888888664 33 6899999999976 222221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus       107 ~g~iD~lvnnAg~  119 (275)
T 4imr_A          107 IAPVDILVINASA  119 (275)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence              37899998854

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.50  E-value=1.2e-13  Score=109.22  Aligned_cols=84  Identities=25%  Similarity=0.281  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-------HHHHHHHHHHHhCCceEEEEeccCCChh-hhh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI  147 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~  147 (167)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.       +++..+++... +. ++.++++|++|.+ ...
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GG-QGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-TS-EEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-CC-eEEEEeCCCCCHHHHHH
Confidence            46899999999999999999999999999999999998753       55666666554 44 7999999999987 222


Q ss_pred             hhc-------cceEEEEeccC
Q 031009          148 IYK-------YSWLLVNIYVP  161 (167)
Q Consensus       148 ~~~-------~~dilvN~ai~  161 (167)
                      +.+       .+|++||||-.
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCc
Confidence            221       27999999854

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.50  E-value=1e-13  Score=110.23  Aligned_cols=85  Identities=24%  Similarity=0.276  Sum_probs=68.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-------HHHHHHHHHHHHhCCceEEEEeccCCChh-hhh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-------RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI  147 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~  147 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+       .+++..+++... +. ++.++++|++|.+ .+.
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GG-QALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TS-EEEEEECCTTSHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHH
Confidence            4689999999999999999999999999999999999876       466667777655 44 6999999999986 222


Q ss_pred             hhc-------cceEEEEeccCc
Q 031009          148 IYK-------YSWLLVNIYVPS  162 (167)
Q Consensus       148 ~~~-------~~dilvN~ai~~  162 (167)
                      +.+       .+|++||||-..
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~  104 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAI  104 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            222       389999988543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.50  E-value=1.4e-13  Score=106.45  Aligned_cols=86  Identities=19%  Similarity=0.256  Sum_probs=67.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccC--CChh-hhhhhc-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRL--VSAP-YNIIYK-  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv--~d~~-~~~~~~-  150 (167)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...... +..++.+|+  +|.+ ...+.+ 
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP-QPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSC-CCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCC-CceEEEeccccCCHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999888888765433 456666666  7765 222211 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus        88 ~~~~~g~id~lv~nAg~  104 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASI  104 (247)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEECCcc
Confidence                  37899998753

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.50  E-value=1.9e-13  Score=105.45  Aligned_cols=85  Identities=31%  Similarity=0.363  Sum_probs=69.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++.+|++|.+ ...+.+    
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888777777653344 6889999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||+|-.
T Consensus        82 ~~~~~d~vi~~Ag~   95 (248)
T 2pnf_A           82 LVDGIDILVNNAGI   95 (248)
T ss_dssp             HSSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence               37899998853

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.50  E-value=1e-13  Score=108.56  Aligned_cols=81  Identities=21%  Similarity=0.209  Sum_probs=67.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hh-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IY-----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~-----  149 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ... +.     
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GG-QCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SS-EEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CC-ceEEEECCCCCHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999999998888888887655 33 6889999999976 221 11     


Q ss_pred             --ccceEEEEec
Q 031009          150 --KYSWLLVNIY  159 (167)
Q Consensus       150 --~~~dilvN~a  159 (167)
                        ..+|++||||
T Consensus        80 ~~g~id~lvnnA   91 (260)
T 2qq5_A           80 QQGRLDVLVNNA   91 (260)
T ss_dssp             HTTCCCEEEECC
T ss_pred             cCCCceEEEECC
Confidence              1269999998

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.50  E-value=8.2e-14  Score=109.33  Aligned_cols=85  Identities=25%  Similarity=0.248  Sum_probs=67.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.......++.++.+|++|.+ ...+ ..    
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998887776666644322225889999999976 2222 22    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus        84 ~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 FGRLDILVNNAGV   96 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              26999999853

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.50  E-value=2e-13  Score=107.73  Aligned_cols=87  Identities=16%  Similarity=0.163  Sum_probs=70.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.......++.++.+|++|.+ ...+.+   
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            3458899999999999999999999999999999999999888888777766533336889999999986 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|++||||-.
T Consensus       107 ~~~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          107 SQHSGVDICINNAGL  121 (279)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HhCCCCCEEEECCCC
Confidence                37899998853

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.50  E-value=1.8e-13  Score=107.77  Aligned_cols=87  Identities=18%  Similarity=0.216  Sum_probs=68.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ++.+++||+++||||++|||++++++|+++|++|++++++ .+..++..+++... +. ++.++++|++|.+ ...+.+ 
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GS-DAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHH
Confidence            4457999999999999999999999999999999998764 55667777777654 33 6899999999986 222221 


Q ss_pred             ------cceEEEEeccCc
Q 031009          151 ------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ------~~dilvN~ai~~  162 (167)
                            .+|++||||-..
T Consensus        90 ~~~~~g~id~lvnnAg~~  107 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVV  107 (270)
T ss_dssp             HHHHHSCCCEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence                  279999998544

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.50  E-value=6.4e-14  Score=109.49  Aligned_cols=83  Identities=17%  Similarity=0.186  Sum_probs=59.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ++.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++++|++|.+ ...+.+   
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GA-AVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CC-ceEEEEccCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999998877766665    22 5788999999976 222222   


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus        77 ~~~g~id~lv~nAg~~   92 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTA   92 (257)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                389999998543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.50  E-value=2.3e-13  Score=105.80  Aligned_cols=84  Identities=24%  Similarity=0.341  Sum_probs=66.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      |+.+|+++||||++|||++++++|+++|++|+++++ +.+..++..+++... +. ++.++++|++|.+ .+.+.+    
T Consensus         1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~~   78 (246)
T 3osu_A            1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GV-DSFAIQANVADADEVKAMIKEVVS   78 (246)
T ss_dssp             CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TS-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999887 556777777777654 33 6889999999986 222222    


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         .+|++||||-..
T Consensus        79 ~~g~id~lv~nAg~~   93 (246)
T 3osu_A           79 QFGSLDVLVNNAGIT   93 (246)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence               379999998543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.49  E-value=1.9e-13  Score=107.66  Aligned_cols=84  Identities=20%  Similarity=0.154  Sum_probs=66.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCCh----h-hhhhhc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSA----P-YNIIYK  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~----~-~~~~~~  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++....+. ++.++++|++|.    + ...+.+
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC-ceEEEeccCCCccccHHHHHHHHH
Confidence            468899999999999999999999999999999999 888888888888665233 688999999998    5 222221


Q ss_pred             -------cceEEEEeccC
Q 031009          151 -------YSWLLVNIYVP  161 (167)
Q Consensus       151 -------~~dilvN~ai~  161 (167)
                             .+|++||||-.
T Consensus        87 ~~~~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHhcCCCCEEEECCCC
Confidence                   37999999853

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.49  E-value=1.3e-13  Score=106.81  Aligned_cols=80  Identities=19%  Similarity=0.297  Sum_probs=64.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc------
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK------  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~------  150 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++.+|++|.+ .+.+.+      
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL----GN-AVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cC-CceEEECCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999998888776666    22 4889999999976 222221      


Q ss_pred             -cceEEEEeccCc
Q 031009          151 -YSWLLVNIYVPS  162 (167)
Q Consensus       151 -~~dilvN~ai~~  162 (167)
                       .+|++||||-..
T Consensus        76 g~id~lvnnAg~~   88 (235)
T 3l6e_A           76 GLPELVLHCAGTG   88 (235)
T ss_dssp             CSCSEEEEECCCC
T ss_pred             CCCcEEEECCCCC
Confidence             279999988543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.49  E-value=1.1e-13  Score=111.84  Aligned_cols=87  Identities=21%  Similarity=0.171  Sum_probs=70.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC----------hhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----------AERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      .|.+++||+++||||++|||++++++|+++|++|++++|+          .+.+++..+++... +. ++.++++|++|.
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~   98 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-GG-EAVADGSNVADW   98 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-TC-EEEEECCCTTSH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-CC-cEEEEECCCCCH
Confidence            3557899999999999999999999999999999999987          67777777887654 33 689999999998


Q ss_pred             h-hhhhhc-------cceEEEEeccCc
Q 031009          144 P-YNIIYK-------YSWLLVNIYVPS  162 (167)
Q Consensus       144 ~-~~~~~~-------~~dilvN~ai~~  162 (167)
                      + ...+.+       .+|++||||-..
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~  125 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIV  125 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            6 222222       379999998543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.49  E-value=1.5e-13  Score=107.30  Aligned_cols=82  Identities=23%  Similarity=0.295  Sum_probs=66.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++.+|++|.+ .+.+.+   
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GD-AALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998887766654    33 5899999999986 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        79 ~~~g~id~li~~Ag~   93 (261)
T 3n74_A           79 SKFGKVDILVNNAGI   93 (261)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCcc
Confidence                27899998853

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.49  E-value=2.1e-13  Score=108.99  Aligned_cols=86  Identities=20%  Similarity=0.253  Sum_probs=64.2

Q ss_pred             CCCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh
Q 031009           73 KREPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY  149 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~  149 (167)
                      .++.+++||+++||||+  +|||++++++|+++|++|++++|+++. .+..+++....+  ++.++++|++|.+ .+.+.
T Consensus        24 ~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~  100 (293)
T 3grk_A           24 AQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEELG--AFVAGHCDVADAASIDAVF  100 (293)
T ss_dssp             ---CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHHT--CEEEEECCTTCHHHHHHHH
T ss_pred             cccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcC--CceEEECCCCCHHHHHHHH
Confidence            34557999999999999  559999999999999999999998543 334455555545  4788999999986 22222


Q ss_pred             c-------cceEEEEeccC
Q 031009          150 K-------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~-------~~dilvN~ai~  161 (167)
                      +       .+|++||||-.
T Consensus       101 ~~~~~~~g~iD~lVnnAG~  119 (293)
T 3grk_A          101 ETLEKKWGKLDFLVHAIGF  119 (293)
T ss_dssp             HHHHHHTSCCSEEEECCCC
T ss_pred             HHHHHhcCCCCEEEECCcc
Confidence            2       27899998853

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.49  E-value=9.7e-14  Score=109.11  Aligned_cols=86  Identities=17%  Similarity=0.224  Sum_probs=67.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC---hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS---AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~  149 (167)
                      .++++++|+++||||++|||++++++|+++|++|++++|.   .+.+++..+++... +. ++.++++|++|.+ .+.+.
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GA-KVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TC-EEEEEECCCCSHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHH
Confidence            4567899999999999999999999999999999998765   44566666666544 33 7999999999987 22222


Q ss_pred             c-------cceEEEEeccC
Q 031009          150 K-------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~-------~~dilvN~ai~  161 (167)
                      +       .+|++||||-.
T Consensus        83 ~~~~~~~g~iD~lvnnAg~  101 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGK  101 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            2       27999999853

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.49  E-value=1.8e-13  Score=109.43  Aligned_cols=87  Identities=16%  Similarity=0.219  Sum_probs=66.5

Q ss_pred             CCCCCCCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh
Q 031009           72 VKREPMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII  148 (167)
Q Consensus        72 ~~~~~~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~  148 (167)
                      ..++++++||+++||||++  |||++++++|+++|++|++++|+++..+.. +++....+.  +.++++|++|.+ .+.+
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~--~~~~~~Dv~d~~~v~~~   98 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRV-DPLAESLGV--KLTVPCDVSDAESVDNM   98 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHHTC--CEEEECCTTCHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHH-HHHHHhcCC--eEEEEcCCCCHHHHHHH
Confidence            4456689999999999996  999999999999999999999997655444 344344444  578999999987 2222


Q ss_pred             hc-------cceEEEEeccC
Q 031009          149 YK-------YSWLLVNIYVP  161 (167)
Q Consensus       149 ~~-------~~dilvN~ai~  161 (167)
                      .+       .+|++||||-.
T Consensus        99 ~~~~~~~~g~iD~lVnnAG~  118 (296)
T 3k31_A           99 FKVLAEEWGSLDFVVHAVAF  118 (296)
T ss_dssp             HHHHHHHHSCCSEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCc
Confidence            22       27999998853

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.49  E-value=5.2e-14  Score=110.70  Aligned_cols=82  Identities=20%  Similarity=0.207  Sum_probs=59.2

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ..++.+++|+++||||++|||++++++|+++|++|++++|+.+...+.   +...    .+.++.+|++|.+ ...+.+ 
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~----~~~~~~~Dv~~~~~v~~~~~~   92 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA----GAVALYGDFSCETGIMAFIDL   92 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH----TCEEEECCTTSHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc----CCeEEECCCCCHHHHHHHHHH
Confidence            345678999999999999999999999999999999999998765433   3322    2678899999986 222221 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus        93 ~~~~~g~iD~lv~nAg~  109 (260)
T 3gem_A           93 LKTQTSSLRAVVHNASE  109 (260)
T ss_dssp             HHHHCSCCSEEEECCCC
T ss_pred             HHHhcCCCCEEEECCCc
Confidence                  27999998853

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.49  E-value=1e-13  Score=109.70  Aligned_cols=82  Identities=17%  Similarity=0.268  Sum_probs=64.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      |..+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ ...+.+   
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----GD-DALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TS-CCEEEECCTTSHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-CeEEEEecCCCHHHHHHHHHHHH
Confidence            44688999999999999999999999999999999999998887776665    22 5889999999986 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        98 ~~~g~iD~lVnnAg~  112 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGT  112 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence                38999998854

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.49  E-value=1.4e-13  Score=108.57  Aligned_cols=86  Identities=19%  Similarity=0.234  Sum_probs=64.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      .+++++|+++||||++|||++++++|+++|++|++. .++.+..++..+++... +. ++.++++|++|.+ .+.+.+  
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~   99 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GG-KALTAQADVSDPAAVRRLFATA   99 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-eEEEEEcCCCCHHHHHHHHHHH
Confidence            356889999999999999999999999999999987 45666677777777654 33 6889999999987 222222  


Q ss_pred             -----cceEEEEeccCc
Q 031009          151 -----YSWLLVNIYVPS  162 (167)
Q Consensus       151 -----~~dilvN~ai~~  162 (167)
                           .+|++||||-..
T Consensus       100 ~~~~g~iD~lvnnAG~~  116 (267)
T 3u5t_A          100 EEAFGGVDVLVNNAGIM  116 (267)
T ss_dssp             HHHHSCEEEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence                 389999998543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.49  E-value=3.1e-13  Score=107.07  Aligned_cols=85  Identities=16%  Similarity=0.189  Sum_probs=66.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc-
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK-  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~-  150 (167)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+. .++..+++... +. ++.++.+|++|.+ ...+ .. 
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GS-DAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CC-CeEEEEcCCCCHHHHHHHHHHH
Confidence            346889999999999999999999999999999999998754 45555666543 33 5888999999976 2222 11 


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus       102 ~~~~g~iD~lv~~Ag~  117 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGV  117 (283)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence                 27999999854

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.49  E-value=1.7e-13  Score=108.01  Aligned_cols=86  Identities=21%  Similarity=0.155  Sum_probs=68.4

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K  150 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~  150 (167)
                      .+.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++... +. ++.++++|++|.+ ...+. .
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~  104 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GV-HSKAYKCNISDPKSVEETISQ  104 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CS-CEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cceEEEeecCCHHHHHHHHHH
Confidence            3445689999999999999999999999999999999999987777666666443 43 6889999999976 22222 2


Q ss_pred             ------cceEEEEecc
Q 031009          151 ------YSWLLVNIYV  160 (167)
Q Consensus       151 ------~~dilvN~ai  160 (167)
                            ..|++||||-
T Consensus       105 ~~~~~g~id~li~~Ag  120 (279)
T 3ctm_A          105 QEKDFGTIDVFVANAG  120 (279)
T ss_dssp             HHHHHSCCSEEEECGG
T ss_pred             HHHHhCCCCEEEECCc
Confidence                  2789999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.48  E-value=9.5e-14  Score=109.47  Aligned_cols=84  Identities=30%  Similarity=0.300  Sum_probs=67.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh-CCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.... ...++.++++|++|.+ ...+.+    
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988887777763221 1125889999999976 222222    


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||||-
T Consensus        83 ~~g~id~lv~~Ag   95 (278)
T 1spx_A           83 KFGKLDILVNNAG   95 (278)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence               3799999884

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.48  E-value=1.5e-13  Score=108.82  Aligned_cols=84  Identities=30%  Similarity=0.365  Sum_probs=68.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +  ++.++++|++|.+ .+.+.+   
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY-G--DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS-S--CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C--ceEEEEeeCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999998887777776432 2  5888999999976 222221   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus       101 ~~~g~iD~lvnnAg~  115 (276)
T 2b4q_A          101 ELSARLDILVNNAGT  115 (276)
T ss_dssp             HHCSCCSEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence                37999999853

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.48  E-value=2.2e-13  Score=105.97  Aligned_cols=83  Identities=24%  Similarity=0.241  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..++..++++.. +. ++.++++|++|.+ ...+.+    
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GH-DVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998888777777654 33 5889999999976 222222    


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||||-
T Consensus        87 ~~~~id~vi~~Ag   99 (260)
T 3awd_A           87 QEGRVDILVACAG   99 (260)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence               3789999885

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.48  E-value=4.2e-13  Score=105.73  Aligned_cols=85  Identities=21%  Similarity=0.155  Sum_probs=69.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+..++..++++.. +. ++.++.+|++|.+ ...+.+   
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GA-KVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-CC-eEEEEEeeCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998888887777654 33 6889999999976 222221   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|++||||-.
T Consensus       104 ~~~g~iD~li~~Ag~  118 (272)
T 1yb1_A          104 AEIGDVSILVNNAGV  118 (272)
T ss_dssp             HHTCCCSEEEECCCC
T ss_pred             HHCCCCcEEEECCCc
Confidence                37899998854

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.48  E-value=1.3e-13  Score=109.45  Aligned_cols=80  Identities=24%  Similarity=0.193  Sum_probs=64.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      +++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ ...+.+     
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GG-NAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----BT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----CC-cEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999988776654433    33 6889999999976 222221     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        77 ~g~iD~lvnnAg~   89 (281)
T 3zv4_A           77 FGKIDTLIPNAGI   89 (281)
T ss_dssp             HSCCCEEECCCCC
T ss_pred             cCCCCEEEECCCc
Confidence              27999999853

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.48  E-value=3e-13  Score=107.69  Aligned_cols=86  Identities=30%  Similarity=0.348  Sum_probs=70.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH----hCCceEEEEeccCCChh-hhhhh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE----FGEQHVWVPPSRLVSAP-YNIIY  149 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dv~d~~-~~~~~  149 (167)
                      ...+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...    .+. ++.++++|++|.+ ...+.
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA-RVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCC-CEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCc-cEEEEecCCCCHHHHHHHH
Confidence            34688999999999999999999999999999999999998888888887652    122 6899999999976 22222


Q ss_pred             -c------cceEEEEeccC
Q 031009          150 -K------YSWLLVNIYVP  161 (167)
Q Consensus       150 -~------~~dilvN~ai~  161 (167)
                       .      ..|++||||-.
T Consensus        92 ~~~~~~~g~id~li~~Ag~  110 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGG  110 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence             2      27999998853

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.48  E-value=2.3e-13  Score=110.46  Aligned_cols=68  Identities=19%  Similarity=0.217  Sum_probs=57.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .++++|+++||||++|||++++++|+++|++|++++ |+.+.++++.+++....+. ++.++++|++|.+
T Consensus        42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~d~~  110 (328)
T 2qhx_A           42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVA  110 (328)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC-eEEEEEeeCCCch
Confidence            348899999999999999999999999999999999 9998888888887644343 6899999999865

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.48  E-value=1.7e-13  Score=107.13  Aligned_cols=85  Identities=20%  Similarity=0.256  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHH---CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-h--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-I--  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~---~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~--  148 (167)
                      +.+++|+++||||++|||++++++|++   +|++|++++|+.+.+++..+++....+..++.++++|++|.+ ... +  
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            367899999999999999999999999   899999999999988888888866532337899999999976 221 1  


Q ss_pred             -hc-----cce--EEEEecc
Q 031009          149 -YK-----YSW--LLVNIYV  160 (167)
Q Consensus       149 -~~-----~~d--ilvN~ai  160 (167)
                       .+     ..|  ++||||-
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCC
T ss_pred             HHhccccccCCccEEEECCc
Confidence             11     135  9999884

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.48  E-value=3.6e-13  Score=106.48  Aligned_cols=85  Identities=24%  Similarity=0.243  Sum_probs=67.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ..+++||+++||||++|||++++++|+++|++|++++++ .+..++..+++... +. ++.++++|++|.+ .+.+.+  
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GG-RAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999998665 46667777777654 33 6889999999987 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus       104 ~~~~g~iD~lvnnAg~  119 (271)
T 3v2g_A          104 VEALGGLDILVNSAGI  119 (271)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCcEEEECCCC
Confidence                 37999999854

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.48  E-value=2.9e-13  Score=106.56  Aligned_cols=85  Identities=33%  Similarity=0.271  Sum_probs=66.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      .++++||+++||||++|||++++++|+++|++|++++|+ .+..++..++++.. +. ++.++++|++|.+ ...+.+  
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GY-KAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CC-ceEEEECCCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999999995 44455555555543 33 6899999999986 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus       102 ~~~~g~id~li~nAg~  117 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGV  117 (271)
T ss_dssp             HHHHSSCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence                 37899998854

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.48  E-value=3.1e-13  Score=107.10  Aligned_cols=82  Identities=23%  Similarity=0.251  Sum_probs=68.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+ .++.++.+|++|.+ ...+.+     
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999988888777766533 36899999999976 222221     


Q ss_pred             --cceEEEEec
Q 031009          151 --YSWLLVNIY  159 (167)
Q Consensus       151 --~~dilvN~a  159 (167)
                        ..|++|||+
T Consensus       104 ~g~iD~li~na  114 (286)
T 1xu9_A          104 MGGLDMLILNH  114 (286)
T ss_dssp             HTSCSEEEECC
T ss_pred             cCCCCEEEECC
Confidence              379999983

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.48  E-value=2e-13  Score=105.74  Aligned_cols=84  Identities=23%  Similarity=0.297  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+    
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GG-QAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-CC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888777777654 33 5888999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||+|-.
T Consensus        85 ~~~~~d~vi~~Ag~   98 (255)
T 1fmc_A           85 KLGKVDILVNNAGG   98 (255)
T ss_dssp             HHSSCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence               37899998853

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.47  E-value=1.9e-13  Score=107.64  Aligned_cols=86  Identities=24%  Similarity=0.250  Sum_probs=65.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ...+.++|+++||||++|||++++++|+++|++|++. .|+.+..++..+++... +. ++.++.+|++|.+ ...+.+ 
T Consensus        20 ~~~m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~   97 (272)
T 4e3z_A           20 FQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GG-EAVAIPGDVGNAADIAAMFSA   97 (272)
T ss_dssp             ----CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-CC-cEEEEEcCCCCHHHHHHHHHH
Confidence            3346678999999999999999999999999999886 77877777777777654 33 7999999999976 222222 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus        98 ~~~~~g~id~li~nAg~  114 (272)
T 4e3z_A           98 VDRQFGRLDGLVNNAGI  114 (272)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHhCCCCCEEEECCCC
Confidence                  27899998853

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.47  E-value=1.2e-13  Score=108.08  Aligned_cols=88  Identities=19%  Similarity=0.198  Sum_probs=70.3

Q ss_pred             CCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHH-HHHHHHHHHHhCCceEEEEeccCCChh-hhhhh
Q 031009           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~  149 (167)
                      +++++++|+++||||+  +|||++++++|+++|++|++++|+.+.. ++..+++....+. ++.++++|++|.+ .+.+.
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~   92 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KAKAYKCQVDSYESCEKLV   92 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCC-CEECCBCCTTCHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCC-ceeEEecCCCCHHHHHHHH
Confidence            3457899999999999  9999999999999999999999887655 6677777766555 7999999999987 22222


Q ss_pred             c-------cceEEEEeccCc
Q 031009          150 K-------YSWLLVNIYVPS  162 (167)
Q Consensus       150 ~-------~~dilvN~ai~~  162 (167)
                      +       .+|++||||-..
T Consensus        93 ~~~~~~~g~id~li~nAg~~  112 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGAT  112 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            2       269999988543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.47  E-value=2.6e-13  Score=107.42  Aligned_cols=86  Identities=21%  Similarity=0.239  Sum_probs=67.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ..++++||+++||||++|||++++++|+++|++|++++|+ +..++..+++... +. ++.++++|++|.+ ...+.+  
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~~~~  101 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GG-SAEAVVADLADLEGAANVAEEL  101 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-TC-EEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999976 4556666666543 33 6899999999987 222222  


Q ss_pred             ----cceEEEEeccCc
Q 031009          151 ----YSWLLVNIYVPS  162 (167)
Q Consensus       151 ----~~dilvN~ai~~  162 (167)
                          .+|++||||-..
T Consensus       102 ~~~g~iD~lv~nAg~~  117 (273)
T 3uf0_A          102 AATRRVDVLVNNAGII  117 (273)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HhcCCCcEEEECCCCC
Confidence                379999998543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.47  E-value=1.7e-13  Score=106.21  Aligned_cols=83  Identities=29%  Similarity=0.363  Sum_probs=68.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+ .+.+++..+++... +. ++.++.+|++|.+ ...+.+    
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GG-DAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-TC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-CC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998 77787777777654 33 6899999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        82 ~~g~id~vi~~Ag~   95 (258)
T 3afn_B           82 KFGGIDVLINNAGG   95 (258)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence               37899998853

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.47  E-value=2.9e-13  Score=110.89  Aligned_cols=86  Identities=23%  Similarity=0.290  Sum_probs=68.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-------HHHHHHHHHHHhCCceEEEEeccCCChh-h
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVWVPPSRLVSAP-Y  145 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~  145 (167)
                      .+..++||+++||||++|||++++++|+++|++|++++|+.+.       +++..+++... +. ++.++++|++|.+ .
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~-~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GG-KALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TC-EEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CC-eEEEEEccCCCHHHH
Confidence            3457899999999999999999999999999999999998764       55666666554 33 6899999999987 2


Q ss_pred             hhhhc-------cceEEEEeccC
Q 031009          146 NIIYK-------YSWLLVNIYVP  161 (167)
Q Consensus       146 ~~~~~-------~~dilvN~ai~  161 (167)
                      +.+.+       .+|++||||-.
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            22222       38999999854

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.46  E-value=1.8e-13  Score=108.34  Aligned_cols=85  Identities=22%  Similarity=0.285  Sum_probs=64.4

Q ss_pred             CCCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh
Q 031009           73 KREPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY  149 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~  149 (167)
                      ..|.++++|+++||||+  +|||++++++|+++|++|++++|+.  .++..+++....+  ++.++++|++|.+ ...+.
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~   94 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLF   94 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHHHH
Confidence            34667999999999988  7899999999999999999999987  3344556655544  3788999999986 22222


Q ss_pred             -c------cceEEEEeccC
Q 031009          150 -K------YSWLLVNIYVP  161 (167)
Q Consensus       150 -~------~~dilvN~ai~  161 (167)
                       .      .+|++||||-.
T Consensus        95 ~~~~~~~g~id~li~nAg~  113 (280)
T 3nrc_A           95 VELGKVWDGLDAIVHSIAF  113 (280)
T ss_dssp             HHHHHHCSSCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCcc
Confidence             1      27999998854

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.46  E-value=7.4e-14  Score=110.49  Aligned_cols=75  Identities=23%  Similarity=0.178  Sum_probs=58.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~--  150 (167)
                      +.++|+||+++||||++|||++++++|+++|++|++++|+.++.           .. +..++++|++|++. +.+.+  
T Consensus         5 dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~-~~~~~~~Dv~~~~~v~~~~~~~   72 (261)
T 4h15_A            5 EFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LP-EELFVEADLTTKEGCAIVAEAT   72 (261)
T ss_dssp             CCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SC-TTTEEECCTTSHHHHHHHHHHH
T ss_pred             hccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CC-cEEEEEcCCCCHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999976421           11 23468899999872 22211  


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        73 ~~~~G~iDilVnnAG   87 (261)
T 4h15_A           73 RQRLGGVDVIVHMLG   87 (261)
T ss_dssp             HHHTSSCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence                 1899999874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.46  E-value=4.5e-13  Score=104.61  Aligned_cols=80  Identities=20%  Similarity=0.191  Sum_probs=65.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-------~  151 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++++|++|.+ ...+.+       .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GG-HAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999998888877777654 33 5888999999976 222222       3


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||||-.
T Consensus        80 id~lv~nAg~   89 (256)
T 1geg_A           80 FDVIVNNAGV   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7999998843

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.46  E-value=1.5e-13  Score=108.19  Aligned_cols=80  Identities=18%  Similarity=0.225  Sum_probs=64.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.    . ++.++++|++|.+ .+. +..    
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----A-EAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----S-SEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----C-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999887766555442    2 5888999999986 222 222    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        78 ~g~iD~lvnnAg~   90 (263)
T 2a4k_A           78 FGRLHGVAHFAGV   90 (263)
T ss_dssp             HSCCCEEEEGGGG
T ss_pred             cCCCcEEEECCCC
Confidence              27999999853

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.46  E-value=2.3e-13  Score=105.93  Aligned_cols=85  Identities=20%  Similarity=0.219  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~---  150 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++....+. ++.++.+|++|.+ .+.+ ..   
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCC-eeEEEEeeCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999877666666677655454 6889999999976 2222 21   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        89 ~~~~id~li~~Ag~  102 (265)
T 1h5q_A           89 DLGPISGLIANAGV  102 (265)
T ss_dssp             HSCSEEEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence               27899998854

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.46  E-value=4.3e-13  Score=104.01  Aligned_cols=83  Identities=28%  Similarity=0.264  Sum_probs=66.7

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-  150 (167)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    .. ++.++.+|+++.+ ... +.+ 
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~   82 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----KD-NYTIEVCNLANKEECSNLISKT   82 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CS-SEEEEECCTTSHHHHHHHHHTC
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----cc-CccEEEcCCCCHHHHHHHHHhc
Confidence            455789999999999999999999999999999999999998887766655    22 5888999999977 222 222 


Q ss_pred             -cceEEEEeccC
Q 031009          151 -YSWLLVNIYVP  161 (167)
Q Consensus       151 -~~dilvN~ai~  161 (167)
                       .+|++||||-.
T Consensus        83 ~~id~li~~Ag~   94 (249)
T 3f9i_A           83 SNLDILVCNAGI   94 (249)
T ss_dssp             SCCSEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence             37899998853

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.46  E-value=5.8e-13  Score=104.10  Aligned_cols=84  Identities=25%  Similarity=0.310  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-----  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-----  149 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.     
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GF-QVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eeEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888877777654 33 5888999999976 22221     


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ...|++||||-.
T Consensus        88 ~~~~~id~li~~Ag~  102 (266)
T 1xq1_A           88 MFGGKLDILINNLGA  102 (266)
T ss_dssp             HHTTCCSEEEEECCC
T ss_pred             HhCCCCcEEEECCCC
Confidence               236899998743

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.46  E-value=4.5e-13  Score=105.10  Aligned_cols=80  Identities=15%  Similarity=0.177  Sum_probs=64.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..     .+.++++|++|.+ ...+.+     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD-----AARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG-----GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-----CceEEEecCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998877766555421     4788999999976 222222     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus        79 ~g~iD~lv~~Ag~   91 (260)
T 1nff_A           79 FGGLHVLVNNAGI   91 (260)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              37999998853

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.45  E-value=6.1e-13  Score=104.04  Aligned_cols=85  Identities=18%  Similarity=0.207  Sum_probs=68.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      .+.+++|+++||||++|||++++++|+++|++|++++| +.+.+++..++++.. +. ++.++.+|++|.+ ...+.+  
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GA-QGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999 777777777777654 33 5889999999976 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           ..|++||+|-.
T Consensus        94 ~~~~~~~d~vi~~Ag~  109 (274)
T 1ja9_A           94 VSHFGGLDFVMSNSGM  109 (274)
T ss_dssp             HHHHSCEEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence                 37899998854

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.45  E-value=4.9e-13  Score=104.31  Aligned_cols=80  Identities=21%  Similarity=0.253  Sum_probs=65.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ .+.+. .    
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GE-RSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CT-TEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988777666555    33 5889999999976 22222 2    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        78 ~g~id~lv~~Ag~   90 (253)
T 1hxh_A           78 LGTLNVLVNNAGI   90 (253)
T ss_dssp             HCSCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              26999999854

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.45  E-value=2.6e-13  Score=106.20  Aligned_cols=82  Identities=22%  Similarity=0.189  Sum_probs=65.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.    . ++.++++|++|.+ ...+.+   
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----N-GGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----T-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----c-CCeEEEEeCCCHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999877765544432    2 4778899999976 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          ..|++||||-.
T Consensus        82 ~~~g~iD~lv~~Ag~   96 (263)
T 3ak4_A           82 DALGGFDLLCANAGV   96 (263)
T ss_dssp             HHHTCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence                37999998853

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.44  E-value=4.5e-13  Score=104.41  Aligned_cols=81  Identities=17%  Similarity=0.236  Sum_probs=66.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ ...+.+    
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GN-NCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988777665554    33 5889999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        83 ~~g~id~li~~Ag~   96 (265)
T 2o23_A           83 KFGRVDVAVNCAGI   96 (265)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HCCCCCEEEECCcc
Confidence               37899998843

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.44  E-value=4e-13  Score=104.95  Aligned_cols=80  Identities=21%  Similarity=0.235  Sum_probs=64.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++.+|++|.+ ...+.+     
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GD-AARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GG-GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999988777665554    22 5888999999976 222222     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus        77 ~g~iD~lv~nAg~   89 (254)
T 1hdc_A           77 FGSVDGLVNNAGI   89 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              37999998853

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.44  E-value=5.6e-13  Score=103.77  Aligned_cols=83  Identities=18%  Similarity=0.238  Sum_probs=67.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++| +.+..++..+++... +. ++.++.+|++|.+ ...+.+    
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GG-EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999 777777777777543 33 6889999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        82 ~~g~id~li~~Ag~   95 (261)
T 1gee_A           82 EFGKLDVMINNAGL   95 (261)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence               37899998853

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.44  E-value=3.5e-13  Score=106.70  Aligned_cols=81  Identities=22%  Similarity=0.276  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~---  150 (167)
                      ..++ |+++||||++|||++++++|+++|++|++++|+.+.+++..+++...   .++.++++|++|.+ ...+. .   
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3556 89999999999999999999999999999999998888777766432   25889999999986 22222 2   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|++||||-
T Consensus        94 ~~g~iD~lvnnAG  106 (272)
T 2nwq_A           94 EFATLRGLINNAG  106 (272)
T ss_dssp             GGSSCCEEEECCC
T ss_pred             HhCCCCEEEECCC
Confidence               1699999884

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.44  E-value=7.7e-13  Score=102.94  Aligned_cols=80  Identities=23%  Similarity=0.265  Sum_probs=63.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-----  149 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+. +.+++   +++.. +. ++.++++|++|.+ .+.+.     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL-GR-RVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc-CC-cEEEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998 66554   33332 33 6889999999976 22221     


Q ss_pred             --ccceEEEEeccC
Q 031009          150 --KYSWLLVNIYVP  161 (167)
Q Consensus       150 --~~~dilvN~ai~  161 (167)
                        ...|++||||-.
T Consensus        79 ~~g~id~lv~nAg~   92 (249)
T 2ew8_A           79 TFGRCDILVNNAGI   92 (249)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence              137999998854

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.44  E-value=3.2e-13  Score=105.23  Aligned_cols=85  Identities=18%  Similarity=0.166  Sum_probs=64.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-----CceEEEEeccCCChh-hhhhh-
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-----EQHVWVPPSRLVSAP-YNIIY-  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~Dv~d~~-~~~~~-  149 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.....     ..++.++++|++|.+ ...+. 
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            57899999999999999999999999999999999999887776666543320     125788999999976 22222 


Q ss_pred             cc------c-eEEEEeccC
Q 031009          150 KY------S-WLLVNIYVP  161 (167)
Q Consensus       150 ~~------~-dilvN~ai~  161 (167)
                      ..      . |++||||-.
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCC
T ss_pred             HHHHHhCCCCeEEEECCCc
Confidence            21      3 999999854

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.44  E-value=7.4e-13  Score=103.97  Aligned_cols=86  Identities=19%  Similarity=0.205  Sum_probs=64.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      .+..+.+|+++||||++|||++++++|+++|++|++. .|+.+..++..+++....+  ++.++.+|++|.+ ...+.+ 
T Consensus        20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG--NGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHH
T ss_pred             hccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHH
Confidence            4446889999999999999999999999999999664 5777777888788766533  5899999999986 222222 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus        98 ~~~~~g~id~li~nAg~  114 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGI  114 (267)
T ss_dssp             HHHHHCCCSEEEECCCC
T ss_pred             HHHHhCCccEEEECCCC
Confidence                  37888998854

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.44  E-value=7.8e-13  Score=104.84  Aligned_cols=86  Identities=24%  Similarity=0.180  Sum_probs=69.1

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh---
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY---  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~---  149 (167)
                      ..+.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.. +. ++.++.+|++|.+ .+.+.   
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GY-ESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CC-ceeEEECCCCCHHHHHHHHHHH
Confidence            345788999999999999999999999999999999999988888777777543 33 5889999999976 22222   


Q ss_pred             ----ccceEEEEeccC
Q 031009          150 ----KYSWLLVNIYVP  161 (167)
Q Consensus       150 ----~~~dilvN~ai~  161 (167)
                          ...|++||||-.
T Consensus       116 ~~~~~~id~li~~Ag~  131 (285)
T 2c07_A          116 LTEHKNVDILVNNAGI  131 (285)
T ss_dssp             HHHCSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence                137899998854

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.44  E-value=7.5e-13  Score=103.85  Aligned_cols=84  Identities=15%  Similarity=0.176  Sum_probs=65.6

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +.+.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|.+ ...+.+  
T Consensus        10 ~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   86 (278)
T 2bgk_A           10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTT   86 (278)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHH
Confidence            33468899999999999999999999999999999999998777665555521   115889999999986 222222  


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           ..|++||||-
T Consensus        87 ~~~~~~id~li~~Ag  101 (278)
T 2bgk_A           87 IAKHGKLDIMFGNVG  101 (278)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCc
Confidence                 3789998884

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.43  E-value=6.8e-13  Score=102.39  Aligned_cols=83  Identities=23%  Similarity=0.318  Sum_probs=65.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|+++ +|+++.+++..+++... +. ++.++.+|++|.+ ...+.+    
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-GI-NVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-TC-CEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-CC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999998 67777777777777543 33 6889999999976 222222    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         ..|++||||-.
T Consensus        80 ~~~~~d~vi~~Ag~   93 (247)
T 2hq1_A           80 AFGRIDILVNNAGI   93 (247)
T ss_dssp             HHSCCCEEEECC--
T ss_pred             hcCCCCEEEECCCC
Confidence               37899998843

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.43  E-value=5.8e-13  Score=104.77  Aligned_cols=86  Identities=16%  Similarity=0.174  Sum_probs=62.9

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      +..++++|+++||||++|||++++++|+++|++|++.+ ++.+..++...++... +. ++.++.+|++|.+ .+.+.+ 
T Consensus        19 p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~   96 (269)
T 3gk3_A           19 PGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-GR-DFKAYAVDVADFESCERCAEK   96 (269)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-TC-CCEEEECCTTCHHHHHHHHHH
T ss_pred             chhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHHHHH
Confidence            34468899999999999999999999999999999998 5555555555555432 33 6899999999986 222222 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            .+|++||||-.
T Consensus        97 ~~~~~g~id~li~nAg~  113 (269)
T 3gk3_A           97 VLADFGKVDVLINNAGI  113 (269)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCc
Confidence                  37899998854

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.43  E-value=8.5e-13  Score=102.42  Aligned_cols=84  Identities=26%  Similarity=0.340  Sum_probs=67.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|+++ .|+.+..++..+++... +. ++.++.+|++|.+ .+.+.+    
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GG-SAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-TC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-CC-ceEEEecCcCCHHHHHHHHHHHHH
Confidence            6889999999999999999999999999999885 67777888887887654 33 6889999999976 222111    


Q ss_pred             ---------cceEEEEeccCc
Q 031009          151 ---------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---------~~dilvN~ai~~  162 (167)
                               .+|++||||-..
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~  102 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIG  102 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCC
T ss_pred             HhcccccCCcccEEEECCCCC
Confidence                     179999998543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.43  E-value=7.6e-13  Score=103.39  Aligned_cols=78  Identities=23%  Similarity=0.287  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+. ++..+++.      . .++++|++|.+ .+.+.+    
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999876 55544442      3 77899999976 222221    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        74 ~~g~iD~lv~~Ag~   87 (256)
T 2d1y_A           74 ALGRVDVLVNNAAI   87 (256)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence               27999999854

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.43  E-value=1.3e-12  Score=101.12  Aligned_cols=82  Identities=26%  Similarity=0.267  Sum_probs=65.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceE-EEEeccCCChh-hhhhh---
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV-WVPPSRLVSAP-YNIIY---  149 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dv~d~~-~~~~~---  149 (167)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++    +. ++ .++.+|++|.+ ...+.   
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL----GA-AVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cc-cceeEEEEecCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999988777666555    22 45 88999999976 22222   


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ...|++||||-.
T Consensus        81 ~~~~~id~li~~Ag~   95 (254)
T 2wsb_A           81 EAVAPVSILVNSAGI   95 (254)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhhCCCcEEEECCcc
Confidence               237899998853

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.43  E-value=3.6e-13  Score=105.26  Aligned_cols=83  Identities=18%  Similarity=0.173  Sum_probs=61.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+...+...++....+. ++.++++|++|.+ ...+.+     
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE-RLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGG-GEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999987765544433333333233 6899999999987 222222     


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||||-
T Consensus        83 ~g~id~lv~~Ag   94 (264)
T 3i4f_A           83 FGKIDFLINNAG   94 (264)
T ss_dssp             HSCCCEEECCCC
T ss_pred             hCCCCEEEECCc
Confidence              3799999986

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.43  E-value=6.4e-13  Score=103.83  Aligned_cols=80  Identities=11%  Similarity=0.186  Sum_probs=64.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH--HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc------
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK------  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~------  150 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.+.  +++..+++... +. ++.++++|++|.+ ...+.+      
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQ-KAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-TC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999877  77776776543 33 6889999999976 222222      


Q ss_pred             -cceEEEEeccC
Q 031009          151 -YSWLLVNIYVP  161 (167)
Q Consensus       151 -~~dilvN~ai~  161 (167)
                       ..|++||||-.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence             37999998854

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.43  E-value=4.7e-13  Score=104.06  Aligned_cols=78  Identities=22%  Similarity=0.237  Sum_probs=62.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +   +.++++|++|.+ .+. +..    
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----G---AHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----T---CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C---CEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987766554433    2   677889999976 222 222    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        75 ~g~id~lvn~Ag~   87 (245)
T 1uls_A           75 LGRLDGVVHYAGI   87 (245)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              27999998853

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.43  E-value=7.6e-13  Score=103.05  Aligned_cols=81  Identities=25%  Similarity=0.277  Sum_probs=66.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .++|+++||||++|||++++++|++ +|++|++++|+.+..++..+++... +. ++.++.+|++|.+ ...+.+     
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GL-SPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-TC-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-CC-eeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999 9999999999998888888887654 33 5888999999976 222222     


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||+|-
T Consensus        80 ~g~id~li~~Ag   91 (276)
T 1wma_A           80 YGGLDVLVNNAG   91 (276)
T ss_dssp             HSSEEEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence              3799999884

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.43  E-value=1.1e-12  Score=106.42  Aligned_cols=84  Identities=19%  Similarity=0.184  Sum_probs=62.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-----hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-----AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++.+|+     .+.++++.+++... +. ++.++++|++|.+ ...+.+
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~-~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DV-DLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TC-CEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CC-cEEEEEeecCCHHHHHHHHH
Confidence            4678999999999999999999999999999988775     44555555555443 33 6899999999986 222222


Q ss_pred             -------cceEEEEeccCc
Q 031009          151 -------YSWLLVNIYVPS  162 (167)
Q Consensus       151 -------~~dilvN~ai~~  162 (167)
                             .+|++||||-..
T Consensus        80 ~~~~~~g~iD~lVnnAG~~   98 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHM   98 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCcC
Confidence                   389999998643

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.42  E-value=7.2e-13  Score=102.48  Aligned_cols=82  Identities=24%  Similarity=0.306  Sum_probs=65.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...   .++.++.+|++|.+ ...+.+     
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988777666555321   25889999999976 222222     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus        80 ~~~id~li~~Ag~   92 (251)
T 1zk4_A           80 FGPVSTLVNNAGI   92 (251)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence              27899998853

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.42  E-value=7.5e-13  Score=103.65  Aligned_cols=85  Identities=13%  Similarity=0.219  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ++++||+++||||+  +|||++++++|+++|++|++++|+....+.. +++....+..++.++++|++|.+ .+.+.+  
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            46899999999999  6799999999999999999999986544433 44444434336899999999976 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        82 ~~~~g~id~li~~Ag~   97 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAF   97 (266)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCeeEEEEcccc
Confidence                 27899998853

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.42  E-value=8.5e-13  Score=103.18  Aligned_cols=85  Identities=19%  Similarity=0.241  Sum_probs=65.4

Q ss_pred             CCCCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc
Q 031009           74 REPMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      +...+++|+++||||+  +|||++++++|+++|++|++++|+.... +..+++....+.  +.++++|++|.+ ...+.+
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGS--ELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTTC--CCEEECCTTCHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcCC--cEEEECCCCCHHHHHHHHH
Confidence            4457899999999998  9999999999999999999999985433 444556555443  788999999987 222222


Q ss_pred             -------cceEEEEeccC
Q 031009          151 -------YSWLLVNIYVP  161 (167)
Q Consensus       151 -------~~dilvN~ai~  161 (167)
                             .+|++||||-.
T Consensus        85 ~~~~~~g~id~lv~nAg~  102 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGF  102 (271)
T ss_dssp             HHHHHCSCEEEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCcc
Confidence                   27999998854

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.41  E-value=8.4e-13  Score=102.99  Aligned_cols=80  Identities=25%  Similarity=0.347  Sum_probs=62.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc------
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK------  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~------  150 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+  ++..+++... +. ++.++.+|++|.+ ...+.+      
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-GV-KAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-SC-CEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-CC-ceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999876  4445555432 33 5888999999986 222222      


Q ss_pred             -cceEEEEeccC
Q 031009          151 -YSWLLVNIYVP  161 (167)
Q Consensus       151 -~~dilvN~ai~  161 (167)
                       ..|++||||-.
T Consensus        78 g~id~lv~~Ag~   89 (255)
T 2q2v_A           78 GGVDILVNNAGI   89 (255)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence             37999998853

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.41  E-value=6.6e-13  Score=103.34  Aligned_cols=85  Identities=15%  Similarity=0.143  Sum_probs=63.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      ....++|+++||||++|||++++++|+++|++|++.+ ++.+..++..+++... +. ++.++++|++|.+ .+.+.+  
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GF-DFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TC-CCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CC-eeEEEecCCCCHHHHHHHHHHH
Confidence            3468899999999999999999999999999999988 6666666666776554 33 6889999999976 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        86 ~~~~g~id~lv~~Ag~  101 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGI  101 (256)
T ss_dssp             HHHTCCEEEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence                 27999998854

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.41  E-value=1.2e-12  Score=101.94  Aligned_cols=82  Identities=18%  Similarity=0.193  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh-h-hhhhhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA-P-YNIIYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~-~~~~~~---  150 (167)
                      ++++|+++||||++|||++++++|+++|++ |++++|+.+.  +..+++.+..+..++.++.+|++|. + ...+.+   
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            578999999999999999999999999996 9999998642  2234444443333788999999986 4 222221   


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          ..|++||||-
T Consensus        80 ~~~g~id~lv~~Ag   93 (254)
T 1sby_A           80 DQLKTVDILINGAG   93 (254)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCc
Confidence                3789999884

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.41  E-value=8.3e-13  Score=104.18  Aligned_cols=82  Identities=17%  Similarity=0.294  Sum_probs=64.6

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+.  +.++++|++|.+ ...+.+   
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS--PYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC--cEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999876 55555666554443  678899999976 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        80 ~~~g~id~lv~nAg~   94 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAF   94 (275)
T ss_dssp             HHTSCEEEEEECCCC
T ss_pred             HHcCCCCEEEECCcc
Confidence                27999998843

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.41  E-value=8.3e-13  Score=104.19  Aligned_cols=79  Identities=19%  Similarity=0.249  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++    .  .+.++++|++|.+ .+.+.+    
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P--GAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T--TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c--CCeEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988776554443    2  3788999999986 222222    


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         ..|++||||-
T Consensus        79 ~~g~iD~lv~nAg   91 (270)
T 1yde_A           79 RFGRLDCVVNNAG   91 (270)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence               2789999884

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.40  E-value=7.8e-13  Score=102.22  Aligned_cols=81  Identities=23%  Similarity=0.280  Sum_probs=64.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-------c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-------Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-------~  151 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+. ++.++++|++|.+ ...+.+       .
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYAD-KVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGG-GEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988887776665222222 5889999999976 222222       3


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||||-.
T Consensus        81 id~li~~Ag~   90 (250)
T 2cfc_A           81 IDVLVNNAGI   90 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7899998843

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.40  E-value=9e-13  Score=103.97  Aligned_cols=81  Identities=23%  Similarity=0.259  Sum_probs=63.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++++|++|.+ ...+.+     
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PD-RAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----TT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cC-CceEEEeeCCCHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999988776654432    33 6889999999986 222222     


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        ..|++||||-..
T Consensus        77 ~g~id~lv~~Ag~~   90 (281)
T 3m1a_A           77 YGRVDVLVNNAGRT   90 (281)
T ss_dssp             HSCCSEEEECCCCE
T ss_pred             CCCCCEEEECCCcC
Confidence              379999998543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.40  E-value=9.4e-13  Score=102.81  Aligned_cols=77  Identities=21%  Similarity=0.296  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++..   +++    +. ++.++++|++|.+ .+.+.+    
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL----GD-RARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT----CT-TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc----CC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999654332   222    33 6899999999987 222222    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||||-
T Consensus        77 ~g~id~lv~nAg   88 (257)
T 3tl3_A           77 MGTLRIVVNCAG   88 (257)
T ss_dssp             HSCEEEEEECGG
T ss_pred             hCCCCEEEECCC
Confidence              3899999985

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.39  E-value=1.5e-12  Score=102.17  Aligned_cols=82  Identities=15%  Similarity=0.251  Sum_probs=64.0

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+. ..++..+++....+.  ..++++|++|.+ ...+.+   
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC--cEEEEccCCCHHHHHHHHHHHH
Confidence            4789999999999  9999999999999999999999987 455555666555444  378899999976 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        83 ~~~g~iD~lv~~Ag~   97 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGF   97 (265)
T ss_dssp             TTCSSEEEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence                27999998853

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.39  E-value=7.1e-13  Score=102.90  Aligned_cols=79  Identities=16%  Similarity=0.153  Sum_probs=62.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh-c--c
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY-K--Y  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~-~--~  151 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+++++.. ++    .  ++.++++|++|.+. +.+. .  .
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~--~~~~~~~D~~~~~~~~~~~~~~~~   74 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----P--GIQTRVLDVTKKKQIDQFANEVER   74 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----T--TEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----c--CceEEEeeCCCHHHHHHHHHHhCC
Confidence            3578999999999999999999999999999999999987665432 22    1  47889999999873 2222 1  3


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||||-.
T Consensus        75 id~lv~~Ag~   84 (246)
T 2ag5_A           75 LDVLFNVAGF   84 (246)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            7899998854

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.38  E-value=6.9e-13  Score=104.58  Aligned_cols=78  Identities=21%  Similarity=0.246  Sum_probs=60.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.+++.        ....+.++++|++|.+ ...+.+     
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999997665432        1125888999999976 222222     


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        .+|++||||-..
T Consensus        85 ~g~iD~lvnnAg~~   98 (266)
T 3p19_A           85 YGPADAIVNNAGMM   98 (266)
T ss_dssp             HCSEEEEEECCCCC
T ss_pred             CCCCCEEEECCCcC
Confidence              379999998644

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.38  E-value=1.8e-12  Score=102.73  Aligned_cols=82  Identities=21%  Similarity=0.320  Sum_probs=64.3

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      +++||+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+.  +.++++|++|.+ ...+.+   
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS--DLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC--eEEEEcCCCCHHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999875 44555666554443  678899999976 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        95 ~~~g~iD~lv~~Ag~  109 (285)
T 2p91_A           95 ENWGSLDIIVHSIAY  109 (285)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence                27899998843

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.38  E-value=2.3e-12  Score=100.88  Aligned_cols=82  Identities=18%  Similarity=0.305  Sum_probs=64.1

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+.  +.++++|++|.+ .+.+.+   
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG--ALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC--CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC--cEEEECCCCCHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999875 44455666554343  678999999976 222222   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        82 ~~~g~iD~lv~~Ag~   96 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAF   96 (261)
T ss_dssp             HHHSSEEEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence                37999998853

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.37  E-value=1.7e-12  Score=101.31  Aligned_cols=85  Identities=19%  Similarity=0.230  Sum_probs=63.0

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCC---CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY  149 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~  149 (167)
                      +...+++|+++||||++|||++++++|+++|   ++|++++|+.+..+++ +++... +. ++.++.+|++|.+ ...+.
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~-~~-~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN-HS-NIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH-CT-TEEEEECCTTCGGGHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc-CC-ceEEEEecCCChHHHHHHH
Confidence            4457889999999999999999999999999   9999999998765543 445443 33 5889999999976 22222


Q ss_pred             c---------cceEEEEeccC
Q 031009          150 K---------YSWLLVNIYVP  161 (167)
Q Consensus       150 ~---------~~dilvN~ai~  161 (167)
                      +         ..|++||||-.
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~  112 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCC
T ss_pred             HHHHHhcCCCCccEEEECCCc
Confidence            2         47899998853

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.37  E-value=2.8e-12  Score=98.83  Aligned_cols=80  Identities=26%  Similarity=0.215  Sum_probs=62.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c--c
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K--Y  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~--~  151 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++    .  ...++.+|++|.+ ...+. .  .
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~   76 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALGSVGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHHHHHHHHHHcCC
Confidence            4688999999999999999999999999999999999987766554433    2  2455699999987 22222 2  2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||||-.
T Consensus        77 id~vi~~Ag~   86 (244)
T 3d3w_A           77 VDLLVNNAAV   86 (244)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            7999998854

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.37  E-value=3e-12  Score=98.61  Aligned_cols=80  Identities=24%  Similarity=0.280  Sum_probs=64.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-------
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-------  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-------  150 (167)
                      ||+++||||++|||++++++|+++|++|++ .+|+.+..++..++++.. +. ++.++++|++|.+ ...+.+       
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GG-QAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TC-EEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-cEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999 489888887777777654 33 6889999999976 222222       


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||||-.
T Consensus        79 ~id~li~~Ag~   89 (244)
T 1edo_A           79 TIDVVVNNAGI   89 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            37899998853

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.37  E-value=1.2e-12  Score=100.60  Aligned_cols=77  Identities=21%  Similarity=0.281  Sum_probs=61.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hcc---ceEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YKY---SWLL  155 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~~---~dil  155 (167)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+++    +. ++.++.+|++|.+ ...+ .+.   .|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SN-NVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SS-CCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hh-ccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            68999999999999999999999999999999998887666555    33 6888999999987 2222 222   4899


Q ss_pred             EEeccCc
Q 031009          156 VNIYVPS  162 (167)
Q Consensus       156 vN~ai~~  162 (167)
                      ||||-..
T Consensus        77 v~~Ag~~   83 (230)
T 3guy_A           77 VHSAGSG   83 (230)
T ss_dssp             EECCCCC
T ss_pred             EEeCCcC
Confidence            9998543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.36  E-value=3.2e-12  Score=99.61  Aligned_cols=75  Identities=25%  Similarity=0.427  Sum_probs=61.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-------YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-------~~  152 (167)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++    +. ++.++.+|++|.+ .+.+.+       .+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GD-NLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cC-ceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999988777665555    22 5888999999976 222221       27


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |++||||-
T Consensus        76 D~lvnnAg   83 (248)
T 3asu_A           76 DILVNNAG   83 (248)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999885

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.36  E-value=1.7e-12  Score=102.10  Aligned_cols=80  Identities=10%  Similarity=0.099  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCChhHH-HHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        76 ~~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      .++++|+++|||+  ++|||++++++|+++|++|++++|+.+.. ++..++    .+. ++.++++|++|.+ .+.+.+ 
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~-~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR----LPA-KAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT----SSS-CCCEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh----cCC-CceEEEccCCCHHHHHHHHHH
Confidence            3588999999999  99999999999999999999999987653 333322    233 5778999999976 222221 


Q ss_pred             ---------cceEEEEecc
Q 031009          151 ---------YSWLLVNIYV  160 (167)
Q Consensus       151 ---------~~dilvN~ai  160 (167)
                               .+|++||||-
T Consensus        78 ~~~~~g~~~~iD~lv~nAg   96 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIG   96 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCC
T ss_pred             HHHHhCCCCCceEEEECCc
Confidence                     5789999885

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.34  E-value=3.9e-12  Score=98.05  Aligned_cols=80  Identities=28%  Similarity=0.270  Sum_probs=64.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-------eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~-------~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      +|+++||||++|||++++++|+++|+       +|++++|+.+.+++..+++... +. ++.++.+|++|.+ ...+.+ 
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GA-LTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TC-EEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-CC-eeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999998888777776543 33 6899999999976 222222 


Q ss_pred             ------cceEEEEeccC
Q 031009          151 ------YSWLLVNIYVP  161 (167)
Q Consensus       151 ------~~dilvN~ai~  161 (167)
                            ..|++||||-.
T Consensus        80 ~~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHHTSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEEcCCc
Confidence                  37899998854

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.34  E-value=2.9e-12  Score=98.45  Aligned_cols=80  Identities=14%  Similarity=0.111  Sum_probs=59.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceE-EEEeccCCChhhhhhhccc
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV-WVPPSRLVSAPYNIIYKYS  152 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dv~d~~~~~~~~~~  152 (167)
                      ....+++|+++||||+||||++++++|+++|++|++++|+.+..++..    ..    .+ .++.+|++ ..........
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~----~~~~~~~~Dl~-~~~~~~~~~~   85 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----ER----GASDIVVANLE-EDFSHAFASI   85 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HT----TCSEEEECCTT-SCCGGGGTTC
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----hC----CCceEEEcccH-HHHHHHHcCC
Confidence            455789999999999999999999999999999999999988765432    21    46 88999999 3333444457


Q ss_pred             eEEEEeccCc
Q 031009          153 WLLVNIYVPS  162 (167)
Q Consensus       153 dilvN~ai~~  162 (167)
                      |++||+|-..
T Consensus        86 D~vi~~ag~~   95 (236)
T 3e8x_A           86 DAVVFAAGSG   95 (236)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            8888887543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.34  E-value=5.9e-12  Score=96.93  Aligned_cols=80  Identities=21%  Similarity=0.138  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c--c
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K--Y  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~--~  151 (167)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    .  ...++.+|++|.+ ...+. .  .
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~   76 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----P--GIEPVCVDLGDWDATEKALGGIGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----c--CCCcEEecCCCHHHHHHHHHHcCC
Confidence            4588999999999999999999999999999999999987766544332    2  2455699999977 22222 2  2


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||+|-.
T Consensus        77 id~vi~~Ag~   86 (244)
T 1cyd_A           77 VDLLVNNAAL   86 (244)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            7899998853

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.33  E-value=5.4e-13  Score=104.78  Aligned_cols=77  Identities=21%  Similarity=0.187  Sum_probs=61.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +++.+++|+++||||++|||++++++|+++|++|++++|+.+..+           ..++.++++|++|.+ ...+.+  
T Consensus        22 ~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           22 SMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             HHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHH
T ss_pred             hhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999865422           115889999999987 222222  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        91 ~~~~g~iD~lv~nAg~  106 (260)
T 3un1_A           91 IERFGRIDSLVNNAGV  106 (260)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHCCCCCEEEECCCC
Confidence                 37999998853

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.33  E-value=4.8e-12  Score=98.80  Aligned_cols=77  Identities=16%  Similarity=0.179  Sum_probs=61.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc------
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK------  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~------  150 (167)
                      ||+++||||++|||++++++|+++|  +.|++.+|+++.++++.+++    +. ++.++++|++|.+ .+.+.+      
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GD-RFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GG-GEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CC-ceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999985  78999999998877666554    32 6899999999987 222222      


Q ss_pred             -cceEEEEeccC
Q 031009          151 -YSWLLVNIYVP  161 (167)
Q Consensus       151 -~~dilvN~ai~  161 (167)
                       .+|++||||-.
T Consensus        77 g~id~lvnnAg~   88 (254)
T 3kzv_A           77 GKIDSLVANAGV   88 (254)
T ss_dssp             SCCCEEEEECCC
T ss_pred             CCccEEEECCcc
Confidence             27899998854

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.32  E-value=3.6e-12  Score=100.53  Aligned_cols=77  Identities=16%  Similarity=0.092  Sum_probs=58.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+...          +  .+.++++|++|.+ ...+.+  
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------~--~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------N--VSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------T--SSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------C--ceeEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999875431          1  3567899999987 222222  


Q ss_pred             -----cceEEEEeccCc
Q 031009          151 -----YSWLLVNIYVPS  162 (167)
Q Consensus       151 -----~~dilvN~ai~~  162 (167)
                           .+|++||||-..
T Consensus        76 ~~~~g~iD~lv~nAg~~   92 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIE   92 (269)
T ss_dssp             HHHHSCCCEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCcC
Confidence                 379999998543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.32  E-value=6.8e-12  Score=96.51  Aligned_cols=80  Identities=24%  Similarity=0.259  Sum_probs=63.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhCCceEEE-EeccCCChh-hhhhh-------
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWV-PPSRLVSAP-YNIIY-------  149 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~Dv~d~~-~~~~~-------  149 (167)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+..++..+++... +. ++.+ +.+|++|.+ .+.+.       
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GS-PLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-TC-SCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CC-ceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999998 89988888777777654 33 3555 899999976 22221       


Q ss_pred             ccceEEEEeccC
Q 031009          150 KYSWLLVNIYVP  161 (167)
Q Consensus       150 ~~~dilvN~ai~  161 (167)
                      ...|++||||-.
T Consensus        79 ~~~d~li~~Ag~   90 (245)
T 2ph3_A           79 GGLDTLVNNAGI   90 (245)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            137899998853

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.31  E-value=2.7e-12  Score=100.50  Aligned_cols=75  Identities=27%  Similarity=0.322  Sum_probs=56.4

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~-  150 (167)
                      +..++++|+++||||++|||++++++|+++|++|++++|+.+.++             .+.++++|++|.+ .+.+. . 
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~~~   81 (253)
T 2nm0_A           15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYKEI   81 (253)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHHHH
Confidence            445788999999999999999999999999999999999865432             2577899999976 22222 2 


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        82 ~~~~g~iD~lv~nAg~   97 (253)
T 2nm0_A           82 EETHGPVEVLIANAGV   97 (253)
T ss_dssp             HHHTCSCSEEEEECSC
T ss_pred             HHHcCCCCEEEECCCC
Confidence                 16999998854

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.31  E-value=7.3e-12  Score=96.03  Aligned_cols=77  Identities=25%  Similarity=0.216  Sum_probs=60.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-------  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-------  150 (167)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++    .  ++.++.+|++|.+ ...+.+       
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----E--GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----h--hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999987776554443    2  4778899999976 222211       


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||+|-.
T Consensus        78 ~id~li~~Ag~   88 (234)
T 2ehd_A           78 ELSALVNNAGV   88 (234)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            36899998853

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.30  E-value=5.3e-12  Score=97.01  Aligned_cols=79  Identities=24%  Similarity=0.366  Sum_probs=61.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      |++|+++||||++|||++++++|+++|  ++|++++|+.+..+++. ++   .+ .++.++.+|++|.+ ...+.+    
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI---KD-SRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC---CC-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc---cC-CceEEEEeecCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999  99999999987765432 22   12 26899999999976 222222    


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           ..|++||+|-.
T Consensus        76 ~~g~~~id~li~~Ag~   91 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGV   91 (250)
T ss_dssp             HHGGGCCCEEEECCCC
T ss_pred             hcCCCCCcEEEECCcc
Confidence                 57899998843

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.28  E-value=8.5e-12  Score=100.25  Aligned_cols=84  Identities=17%  Similarity=0.174  Sum_probs=66.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~di  154 (167)
                      ..+|+++||||+|+||++++++|+++|++|++++|+.+...+..+++....+. .+.++.+|++|.+ ...+.+  ..|+
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK-TPAFHETDVSDERALARIFDAHPITA   81 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC-CCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCC-CceEEEeecCCHHHHHHHHhccCCcE
Confidence            35789999999999999999999999999999999877666666666555444 6889999999987 333333  4789


Q ss_pred             EEEeccCc
Q 031009          155 LVNIYVPS  162 (167)
Q Consensus       155 lvN~ai~~  162 (167)
                      +||+|...
T Consensus        82 vih~A~~~   89 (341)
T 3enk_A           82 AIHFAALK   89 (341)
T ss_dssp             EEECCCCC
T ss_pred             EEECcccc
Confidence            99988543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.28  E-value=8.6e-12  Score=98.01  Aligned_cols=72  Identities=24%  Similarity=0.182  Sum_probs=58.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.            +. ++.++++|++|.+ ...+.+     
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EA-KYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SC-SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998754            22 5788999999976 222222     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        72 ~g~iD~lv~~Ag~   84 (264)
T 2dtx_A           72 YGSISVLVNNAGI   84 (264)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              37999999854

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.27  E-value=4.4e-11  Score=95.73  Aligned_cols=85  Identities=15%  Similarity=0.155  Sum_probs=66.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEE-eccCCChh-hhhhhccceE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP-PSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dv~d~~-~~~~~~~~di  154 (167)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+..+.+...+....+. ++.++ .+|++|.+ ...+.+..|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-RFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTT-TEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCC-ceEEEEecCCcChHHHHHHHcCCCE
Confidence            567899999999999999999999999999999999987766655555433233 57777 89999876 3344446789


Q ss_pred             EEEeccCc
Q 031009          155 LVNIYVPS  162 (167)
Q Consensus       155 lvN~ai~~  162 (167)
                      +||+|-..
T Consensus        87 vih~A~~~   94 (342)
T 1y1p_A           87 VAHIASVV   94 (342)
T ss_dssp             EEECCCCC
T ss_pred             EEEeCCCC
Confidence            99988543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.26  E-value=1.9e-11  Score=98.87  Aligned_cols=80  Identities=23%  Similarity=0.270  Sum_probs=60.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe---------CChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS---------RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-  145 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~---------r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-  145 (167)
                      ++++||+++||||++|||++++++|+++|++|++.+         |+.+.+++..+++....+  .+   .+|+++.+. 
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~~---~~D~~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--KA---VANYDSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--EE---EEECCCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--eE---EEeCCCHHHH
Confidence            468899999999999999999999999999999975         466777777777765432  22   468888652 


Q ss_pred             -hhhhc------cceEEEEecc
Q 031009          146 -NIIYK------YSWLLVNIYV  160 (167)
Q Consensus       146 -~~~~~------~~dilvN~ai  160 (167)
                       ..+..      .+|++||||-
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence             11111      2799999984

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.26  E-value=4.8e-12  Score=99.75  Aligned_cols=77  Identities=21%  Similarity=0.163  Sum_probs=56.4

Q ss_pred             CCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-
Q 031009           73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-  150 (167)
Q Consensus        73 ~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-  150 (167)
                      ..++.++||+++||||++|||++++++|+++|++|++++|+.+..+             ......+|++|.+ ...+.+ 
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~   87 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGA   87 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHH
Confidence            3466799999999999999999999999999999999999865421             1244588999976 222211 


Q ss_pred             ------cceEEEEeccCc
Q 031009          151 ------YSWLLVNIYVPS  162 (167)
Q Consensus       151 ------~~dilvN~ai~~  162 (167)
                            .+|++||||-..
T Consensus        88 ~~~~~g~iD~lvnnAg~~  105 (266)
T 3uxy_A           88 VAAGLGRLDIVVNNAGVI  105 (266)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHhcCCCCEEEECCCCC
Confidence                  379999988543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.24  E-value=7.7e-12  Score=101.42  Aligned_cols=83  Identities=14%  Similarity=0.031  Sum_probs=60.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh----CCceEEEEeccCCChh-hhhh-hc--
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----GEQHVWVPPSRLVSAP-YNII-YK--  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~d~~-~~~~-~~--  150 (167)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+.+++..++++...    ...++.++.+|++|.+ ...+ ..  
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            37899999999999999999999999999888876544433333333221    1126889999999987 2222 22  


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        81 ~g~iD~lVnnAG~   93 (327)
T 1jtv_A           81 EGRVDVLVCNAGL   93 (327)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence              28999999854

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.24  E-value=7e-12  Score=97.46  Aligned_cols=73  Identities=21%  Similarity=0.307  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++             +..+++|++|.+ .+.+.+    
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998754321             113789999976 222221    


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        78 ~~g~id~lv~~Ag~   91 (247)
T 1uzm_A           78 HQGPVEVLVSNAGL   91 (247)
T ss_dssp             HHSSCSEEEEECSC
T ss_pred             HcCCCCEEEECCCC
Confidence               26899998854

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.23  E-value=1.7e-11  Score=102.12  Aligned_cols=81  Identities=14%  Similarity=0.049  Sum_probs=60.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEeCChhHHH------------HHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVD------------SAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ..+|+++||||++|||+++++.|++ +|++|++++++.+..+            ...+++... +. ++..+.+|++|.+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~-G~-~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK-GL-YAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT-TC-CEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc-CC-ceEEEECCCCCHH
Confidence            5689999999999999999999999 9999999998755321            122334333 43 6888999999986


Q ss_pred             h-hh-hhc------cceEEEEecc
Q 031009          145 Y-NI-IYK------YSWLLVNIYV  160 (167)
Q Consensus       145 ~-~~-~~~------~~dilvN~ai  160 (167)
                      . +. +..      .+|+|||||-
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG  146 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLA  146 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCc
Confidence            2 22 211      1899999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.23  E-value=1.2e-11  Score=103.66  Aligned_cols=80  Identities=16%  Similarity=0.069  Sum_probs=60.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEeCChhHHH------------HHHHHHHHHhCCceEEEEeccCCChhh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVD------------SAVQSLREEFGEQHVWVPPSRLVSAPY  145 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dv~d~~~  145 (167)
                      .+|+++||||++|||+++++.|++ +|++|++++|+.+..+            ...++++.. +. ++..+.+|++|.+.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~-~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GL-YSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TC-CEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CC-cEEEEEecCCCHHH
Confidence            489999999999999999999999 9999999998765432            122444443 43 68889999999862


Q ss_pred             -h-hh----h---ccceEEEEecc
Q 031009          146 -N-II----Y---KYSWLLVNIYV  160 (167)
Q Consensus       146 -~-~~----~---~~~dilvN~ai  160 (167)
                       + .+    .   ..+|+|||||-
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG  161 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLA  161 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCC
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCc
Confidence             1 11    1   23799999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.23  E-value=3.2e-11  Score=105.39  Aligned_cols=83  Identities=18%  Similarity=0.236  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh---------hHHHHHHHHHHHHhCCceEEEEeccCCChh--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVWVPPSRLVSAP--  144 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--  144 (167)
                      ++++||+++||||++|||++++++|+++|++|++.+|+.         +.++++.+++... +. ++.....|+.+.+  
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~-~~~~d~~d~~~~~~~   81 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GG-VAVADYNNVLDGDKI   81 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TC-EEEEECCCTTCHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CC-eEEEEcCCHHHHHHH
Confidence            358899999999999999999999999999999998765         5677777777654 33 3444444444422  


Q ss_pred             hhhhh-c--cceEEEEecc
Q 031009          145 YNIIY-K--YSWLLVNIYV  160 (167)
Q Consensus       145 ~~~~~-~--~~dilvN~ai  160 (167)
                      .+.+. .  .+|+|||||-
T Consensus        82 v~~~~~~~G~iDiLVnNAG  100 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAG  100 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            11111 1  2899999984

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.23  E-value=2.5e-11  Score=106.15  Aligned_cols=83  Identities=23%  Similarity=0.202  Sum_probs=57.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC---------ChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR---------SAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +..+++||+++||||++|||++++++|+++|++|++++|         +.+.+++..+++....+.  +   .+|++|.+
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~--~---~~D~~d~~   87 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE--A---VADYNSVI   87 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC--E---EECCCCGG
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe--E---EEEeCCHH
Confidence            455899999999999999999999999999999999988         667777888888765443  2   36888765


Q ss_pred             -hh-hhhc------cceEEEEeccC
Q 031009          145 -YN-IIYK------YSWLLVNIYVP  161 (167)
Q Consensus       145 -~~-~~~~------~~dilvN~ai~  161 (167)
                       .. .+..      .+|++||||-.
T Consensus        88 ~~~~~~~~~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           88 DGAKVIETAIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             GHHHHHC----------CEECCCCC
T ss_pred             HHHHHHHHHHHHCCCCcEEEECCCC
Confidence             22 2221      27899998853

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.22  E-value=4.3e-11  Score=93.05  Aligned_cols=73  Identities=27%  Similarity=0.253  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.         ..  . .+.++.+|++|.+ ...+.+     
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~--~-~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ--Y-PFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC--C-SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc--C-CceEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998652         01  1 2677889999976 222222     


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        ..|++||||-.
T Consensus        72 ~g~id~lv~~Ag~   84 (250)
T 2fwm_X           72 TERLDALVNAAGI   84 (250)
T ss_dssp             CSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence              37999998854

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.22  E-value=2e-11  Score=94.38  Aligned_cols=73  Identities=8%  Similarity=-0.092  Sum_probs=56.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hh-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IY-----  149 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~-----  149 (167)
                      +.++|+++||||++|||++++++|+++|++|++++|+.+..+           . ...++.+|++|.+ ... +.     
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~-~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------S-ASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------S-EEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------C-CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999875432           1 4677899999876 222 22     


Q ss_pred             ---ccceEEEEeccC
Q 031009          150 ---KYSWLLVNIYVP  161 (167)
Q Consensus       150 ---~~~dilvN~ai~  161 (167)
                         ...|++||||-.
T Consensus        72 ~~~g~iD~lv~~Ag~   86 (241)
T 1dhr_A           72 LGDQKVDAILCVAGG   86 (241)
T ss_dssp             HTTCCEEEEEECCCC
T ss_pred             hCCCCCCEEEEcccc
Confidence               247999999853

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.21  E-value=8e-12  Score=95.54  Aligned_cols=64  Identities=19%  Similarity=0.096  Sum_probs=50.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c--c
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K--Y  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~--~  151 (167)
                      +++++|+++||||++|||++++++|+++|++|++.+|+.+                      +|++|.+ .+.+. +  .
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g~   59 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIGA   59 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHCS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999998764                      7999876 22222 2  3


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      +|++||||-.
T Consensus        60 id~lv~nAg~   69 (223)
T 3uce_A           60 FDHLIVTAGS   69 (223)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7888888753

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.21  E-value=5.8e-11  Score=92.41  Aligned_cols=77  Identities=27%  Similarity=0.303  Sum_probs=55.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhc--c
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYK--Y  151 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~--~  151 (167)
                      +...+++|+++||||++|||++++++|+++|++|++++|+++..    +++    +  .+.++ +|+.+.....+..  .
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~----~--~~~~~-~D~~~~~~~~~~~~~~   81 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS----G--HRYVV-CDLRKDLDLLFEKVKE   81 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT----C--SEEEE-CCTTTCHHHHHHHSCC
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh----C--CeEEE-eeHHHHHHHHHHHhcC
Confidence            34478999999999999999999999999999999999987332    222    3  36666 9993222222222  4


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||||-.
T Consensus        82 iD~lv~~Ag~   91 (249)
T 1o5i_A           82 VDILVLNAGG   91 (249)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7999998853

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.21  E-value=6.2e-11  Score=94.36  Aligned_cols=82  Identities=16%  Similarity=0.240  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~di  154 (167)
                      ..++||+++||||+||+|+++++.|+++|++|++++|+.++.+++.+++....   .+.++.+|+++.+ .....+..|+
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~Dv  191 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVKGAHF  191 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTTTCSE
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHHhCCE
Confidence            35789999999999999999999999999999999999988888877775532   2456778999876 3344455799


Q ss_pred             EEEecc
Q 031009          155 LVNIYV  160 (167)
Q Consensus       155 lvN~ai  160 (167)
                      +||++-
T Consensus       192 lVn~ag  197 (287)
T 1lu9_A          192 VFTAGA  197 (287)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999983

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.20  E-value=2.3e-11  Score=106.27  Aligned_cols=81  Identities=26%  Similarity=0.324  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccC-CChh--hhhhh-c-
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRL-VSAP--YNIIY-K-  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~d~~--~~~~~-~-  150 (167)
                      ..++||+++||||++|||++++++|+++|++|++.++..  .+++.+++... +. ++..+.+|+ ++.+  .+.+. + 
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~-g~-~~~~~~~Dv~~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA-GG-EAWPDQHDVAKDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT-TC-EEEEECCCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc-CC-eEEEEEcChHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998632  34555666554 33 578888999 5433  11111 1 


Q ss_pred             -cceEEEEecc
Q 031009          151 -YSWLLVNIYV  160 (167)
Q Consensus       151 -~~dilvN~ai  160 (167)
                       .+|+|||||-
T Consensus       394 G~iDiLVnNAG  404 (604)
T 2et6_A          394 GTIDILVNNAG  404 (604)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence             2899999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.20  E-value=9.6e-12  Score=96.30  Aligned_cols=77  Identities=19%  Similarity=0.182  Sum_probs=55.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhh-----hhc-
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNI-----IYK-  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~-----~~~-  150 (167)
                      ++++|+++||||++|||++++++|++ |++|++++|+.+.+++..+      . ..+.++.+|+++.....     ... 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~------~-~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE------I-EGVEPIESDIVKEVLEEGGVDKLKNL   73 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT------S-TTEEEEECCHHHHHHTSSSCGGGTTC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh------h-cCCcceecccchHHHHHHHHHHHHhc
Confidence            57899999999999999999999988 9999999999877654432      1 14788999998764211     111 


Q ss_pred             -cceEEEEeccC
Q 031009          151 -YSWLLVNIYVP  161 (167)
Q Consensus       151 -~~dilvN~ai~  161 (167)
                       .+|++||||-.
T Consensus        74 ~~id~lv~~Ag~   85 (245)
T 3e9n_A           74 DHVDTLVHAAAV   85 (245)
T ss_dssp             SCCSEEEECC--
T ss_pred             CCCCEEEECCCc
Confidence             27899998854

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.20  E-value=7.6e-11  Score=90.97  Aligned_cols=72  Identities=31%  Similarity=0.378  Sum_probs=55.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhh-------ccc
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIY-------KYS  152 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~-------~~~  152 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.++.   .+++    +   +.++++|++|.+...+.       ..+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~----~---~~~~~~D~~~~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL----G---AVPLPTDLEKDDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH----T---CEEEECCTTTSCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh----C---cEEEecCCchHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987652   2332    2   56788999983222221       137


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||||-.
T Consensus        72 d~lv~~Ag~   80 (239)
T 2ekp_A           72 HVLVHAAAV   80 (239)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998854

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.19  E-value=4.1e-11  Score=100.59  Aligned_cols=82  Identities=20%  Similarity=0.053  Sum_probs=60.5

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHCCCeEEEEeCChhH------------HHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAER------------VDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        78 l~gk~vlITGas~GIG~a--ia~~L~~~G~~Vi~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      ..||+++||||++|||++  +++.|+++|++|++++|+.+.            .+...+++ ...+. ++.++++|++|.
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~-~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFA-KKKGL-VAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHH-HHTTC-CEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHH-HHcCC-cEEEEEeeCCCH
Confidence            679999999999999999  999999999999999987543            22332333 33344 688999999998


Q ss_pred             h-hhh-hhc------cceEEEEeccC
Q 031009          144 P-YNI-IYK------YSWLLVNIYVP  161 (167)
Q Consensus       144 ~-~~~-~~~------~~dilvN~ai~  161 (167)
                      + .+. +..      .+|++||||-.
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            6 222 111      27999998643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.19  E-value=8.5e-12  Score=97.87  Aligned_cols=73  Identities=14%  Similarity=0.099  Sum_probs=60.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      |++|+++||||+||||++++++|+++|++|++++|++.+..          + ..+.++.+|++|.+ ...+.+..|++|
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~-~~~~~~~~Dl~d~~~~~~~~~~~D~vi   69 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------G-PNEECVQCDLADANAVNAMVAGCDGIV   69 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------C-TTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------C-CCCEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            35689999999999999999999999999999999875432          2 25899999999987 445555689999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |||-.
T Consensus        70 ~~Ag~   74 (267)
T 3rft_A           70 HLGGI   74 (267)
T ss_dssp             ECCSC
T ss_pred             ECCCC
Confidence            98854

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.19  E-value=6e-11  Score=96.52  Aligned_cols=81  Identities=16%  Similarity=0.217  Sum_probs=65.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~d  153 (167)
                      ++++|+++||||+|+||++++++|+++ |+ +|++++|++.+.+++..++.    ...+.++.+|++|.+ ...+.+..|
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~~~D   93 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALEGVD   93 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHhcCC
Confidence            578999999999999999999999999 97 99999999877665554442    226889999999976 444455678


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||+|-.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998853

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.19  E-value=7.6e-11  Score=89.57  Aligned_cols=75  Identities=13%  Similarity=0.128  Sum_probs=59.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~-~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      .|+++||||+||||++++++|+ ++|++|++++|+++ +++++.    .. +. .+.++++|++|.+ ...+.+..|++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~-~~-~~~~~~~D~~d~~~~~~~~~~~d~vv   78 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID-HE-RVTVIEGSFQNPGXLEQAVTNAEVVF   78 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT-ST-TEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC-CC-ceEEEECCCCCHHHHHHHHcCCCEEE
Confidence            3789999999999999999999 89999999999987 554332    11 22 5889999999977 444555678999


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      |++-
T Consensus        79 ~~ag   82 (221)
T 3r6d_A           79 VGAM   82 (221)
T ss_dssp             ESCC
T ss_pred             EcCC
Confidence            8874

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.18  E-value=2.7e-11  Score=93.28  Aligned_cols=72  Identities=15%  Similarity=0.061  Sum_probs=56.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-h------
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-Y------  149 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~------  149 (167)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..+           . ...++.+|++|.+. ..+ .      
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~-~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------D-SNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------S-EEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------c-ccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999876432           1 36778999998762 222 1      


Q ss_pred             --ccceEEEEeccC
Q 031009          150 --KYSWLLVNIYVP  161 (167)
Q Consensus       150 --~~~dilvN~ai~  161 (167)
                        ...|++||||-.
T Consensus        69 ~~g~id~lv~~Ag~   82 (236)
T 1ooe_A           69 QGSQVDGVFCVAGG   82 (236)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             CCCCCCEEEECCcc
Confidence              247999998853

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.17  E-value=3.5e-11  Score=93.69  Aligned_cols=74  Identities=12%  Similarity=-0.023  Sum_probs=53.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +.....+|+++||||++|||++++++|+++|++|++++|+.+..+              ...+.+|++|.+ ...+.+  
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~   81 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKI   81 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHH
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHH
Confidence            334556899999999999999999999999999999999875422              124678899876 222221  


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||-.
T Consensus        82 ~~~~g~iD~li~~Ag~   97 (251)
T 3orf_A           82 NSKSIKVDTFVCAAGG   97 (251)
T ss_dssp             HTTTCCEEEEEECCCC
T ss_pred             HHHcCCCCEEEECCcc
Confidence                 26999998853

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.14  E-value=2.2e-10  Score=96.97  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+... ++. +++....+   +.++.+|++|.+ .+. +..   
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l-~~~~~~~~---~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDL-KRVADKVG---GTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHH-HHHHHHHT---CEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHH-HHHHHHcC---CeEEEEecCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999986532 222 22222222   457899999976 222 111   


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus       284 ~~g~~id~lV~nAGv  298 (454)
T 3u0b_A          284 HHGGKVDILVNNAGI  298 (454)
T ss_dssp             HSTTCCSEEEECCCC
T ss_pred             HcCCCceEEEECCcc
Confidence                27899998843

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.12  E-value=9.2e-11  Score=93.96  Aligned_cols=82  Identities=23%  Similarity=0.110  Sum_probs=59.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~di  154 (167)
                      |++|+++||||+|+||++++++|+++|++|++++|+.+..+.  ..+.......++.++.+|++|.+ ...+.+.  .|+
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDE   78 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence            357899999999999999999999999999999998764321  12222212225888999999976 3333332  689


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||+|-.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998854

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.11  E-value=3.6e-10  Score=108.17  Aligned_cols=87  Identities=25%  Similarity=0.302  Sum_probs=68.2

Q ss_pred             CCCCCCCEEEEeCCCCc-hHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhC--CceEEEEeccCCChh-hhh-h
Q 031009           75 EPMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFG--EQHVWVPPSRLVSAP-YNI-I  148 (167)
Q Consensus        75 ~~~l~gk~vlITGas~G-IG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~d~~-~~~-~  148 (167)
                      .+.++||+++||||++| ||+++++.|+++|++|+++ +|+.+.+++..+++....+  ..++.++.+|++|.+ ... +
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34689999999999998 9999999999999999998 5777777777777755432  237899999999986 221 1


Q ss_pred             ----hc--------cceEEEEeccC
Q 031009          149 ----YK--------YSWLLVNIYVP  161 (167)
Q Consensus       149 ----~~--------~~dilvN~ai~  161 (167)
                          ..        .+|++||||-.
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi  774 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAI  774 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCC
T ss_pred             HHHHHhccccccCCCCeEEEECCCc
Confidence                11        36899998853

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.10  E-value=1.7e-10  Score=99.28  Aligned_cols=83  Identities=16%  Similarity=0.162  Sum_probs=63.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEE-eCCh-------------hHHHHHHHHHHHHhCCceEEEEeccCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIIC-SRSA-------------ERVDSAVQSLREEFGEQHVWVPPSRLV  141 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (167)
                      .-++|+++||||++|||++++++|+++|++ |+++ +|+.             +.+++..+++... +. ++.++.+|++
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~-~v~~~~~Dvt  325 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GA-TATVVTCDLT  325 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TC-EEEEEECCTT
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CC-EEEEEECCCC
Confidence            346899999999999999999999999987 7777 8883             4556677777654 44 7999999999


Q ss_pred             Chh-hhh-hhc-----cceEEEEeccC
Q 031009          142 SAP-YNI-IYK-----YSWLLVNIYVP  161 (167)
Q Consensus       142 d~~-~~~-~~~-----~~dilvN~ai~  161 (167)
                      |.+ ... +..     -+|++||||-.
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            986 222 222     27899998843

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.10  E-value=3.4e-10  Score=96.86  Aligned_cols=80  Identities=19%  Similarity=0.215  Sum_probs=62.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh---hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +|+++||||++|||++++++|+++|+ +|++++|+.   +..++..+++... +. ++.++.+|++|.+ ... +..   
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-g~-~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-GV-RVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-CC-eEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999998 799999964   3456666777654 44 7999999999987 222 222   


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        -+|++||||-.
T Consensus       317 ~g~ld~vVh~AGv  329 (496)
T 3mje_A          317 DAPLTAVFHSAGV  329 (496)
T ss_dssp             TSCEEEEEECCCC
T ss_pred             hCCCeEEEECCcc
Confidence              27899998743

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.10  E-value=1.7e-10  Score=114.62  Aligned_cols=83  Identities=16%  Similarity=0.229  Sum_probs=63.8

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-
Q 031009           77 MLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-  148 (167)
Q Consensus        77 ~l~gk~vlITGas~G-IG~aia~~L~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-  148 (167)
                      .++||+++||||++| ||+++++.|+++|++|++++|+.+.     ++++.+++... +. ++..+++|++|.+. +.+ 
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~-G~-~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF-DA-TLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT-TC-EEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc-CC-eEEEEEecCCCHHHHHHHH
Confidence            489999999999999 9999999999999999999998765     44444444222 23 68889999999862 211 


Q ss_pred             ---hc-------cceEEEEeccC
Q 031009          149 ---YK-------YSWLLVNIYVP  161 (167)
Q Consensus       149 ---~~-------~~dilvN~ai~  161 (167)
                         ..       .+|+|||||-.
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHHhhhhhhcCCCCEEEECCCc
Confidence               22       27999999853

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.10  E-value=1.8e-10  Score=89.09  Aligned_cols=72  Identities=18%  Similarity=0.094  Sum_probs=56.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      .++|+++||||++|||++++++|++ .|++|++.+|+++.            ....+.++++|++|.+ ...+.+     
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIKNV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHHhC
Confidence            4678999999999999999999999 78999999987641            1114788999999987 222222     


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      .+|++||||-.
T Consensus        70 ~id~lv~nAg~   80 (244)
T 4e4y_A           70 SFDGIFLNAGI   80 (244)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            37999999854

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.09  E-value=2.1e-10  Score=87.85  Aligned_cols=75  Identities=20%  Similarity=0.081  Sum_probs=59.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~di  154 (167)
                      +++|+++||||+|+||++++++|+++  |++|++++|++++.++.        +. .+.++.+|++|.+ ...+.+..|+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------~~-~~~~~~~D~~d~~~~~~~~~~~d~   72 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------GG-EADVFIGDITDADSINPAFQGIDA   72 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------TC-CTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------CC-CeeEEEecCCCHHHHHHHHcCCCE
Confidence            45789999999999999999999999  89999999987654321        22 4678899999976 4444556788


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||++-.
T Consensus        73 vi~~a~~   79 (253)
T 1xq6_A           73 LVILTSA   79 (253)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9988754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.09  E-value=5.3e-11  Score=95.71  Aligned_cols=82  Identities=16%  Similarity=0.208  Sum_probs=62.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--c
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--Y  151 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~  151 (167)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+.+...+...++      ..+.++.+|++|.+ ...+.+  .
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~~~~~~~~~~~~   88 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDAGLLERAFDSFK   88 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCHHHHHHHHhhcC
Confidence            34788899999999999999999999999999999999654322111111      15788999999976 334444  5


Q ss_pred             ceEEEEeccCc
Q 031009          152 SWLLVNIYVPS  162 (167)
Q Consensus       152 ~dilvN~ai~~  162 (167)
                      .|++||+|-..
T Consensus        89 ~D~vih~A~~~   99 (330)
T 2pzm_A           89 PTHVVHSAAAY   99 (330)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            78999988543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.09  E-value=2.3e-10  Score=89.07  Aligned_cols=76  Identities=14%  Similarity=0.024  Sum_probs=54.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhh---ccceEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIY---KYSWLL  155 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~---~~~dil  155 (167)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+ +... +. ++.++  |..+..  .+...   ..+|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~-~~-~~~~~--d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-YP-QLKPM--SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-CT-TSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc-CC-cEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence            789999999999999999999999999999999887776654 5544 32 23333  544432  11111   137899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||||-.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998853

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.09  E-value=3.6e-11  Score=92.26  Aligned_cols=76  Identities=18%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~di  154 (167)
                      +++|+++||||+||||++++++|+++|+  +|++++|+++..++..    .    ..+.++.+|++|.+ .....+..|+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~~~~d~   87 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----Y----KNVNQEVVDFEKLDDYASAFQGHDV   87 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----G----GGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----c----CCceEEecCcCCHHHHHHHhcCCCE
Confidence            5688999999999999999999999999  9999999876443211    0    14678899999876 3444456889


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||++-.
T Consensus        88 vi~~ag~   94 (242)
T 2bka_A           88 GFCCLGT   94 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.08  E-value=4.3e-11  Score=92.14  Aligned_cols=76  Identities=9%  Similarity=0.072  Sum_probs=59.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      +.+|+++||||+||||++++++|+++| ++|++++|+++++++.       .. ..+.++++|++|.+ ...+.+..|++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~~-~~~~~~~~Dl~d~~~~~~~~~~~D~v   92 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------YP-TNSQIIMGDVLNHAALKQAMQGQDIV   92 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------CC-TTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------cc-CCcEEEEecCCCHHHHHHHhcCCCEE
Confidence            345789999999999999999999999 8999999998754321       11 25888999999977 44455567888


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||++-.
T Consensus        93 v~~a~~   98 (236)
T 3qvo_A           93 YANLTG   98 (236)
T ss_dssp             EEECCS
T ss_pred             EEcCCC
Confidence            887743

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.07  E-value=6.5e-10  Score=106.31  Aligned_cols=86  Identities=21%  Similarity=0.241  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEeCCCCc-hHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhC--CceEEEEeccCCChh-hhh-h-
Q 031009           76 PMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFG--EQHVWVPPSRLVSAP-YNI-I-  148 (167)
Q Consensus        76 ~~l~gk~vlITGas~G-IG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~d~~-~~~-~-  148 (167)
                      ++++||+++||||++| ||+++++.|+++|++|++++ |+.+.+++..+++....+  ..++.++.+|++|.+ ... + 
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3588999999999999 99999999999999999985 667777666666654432  227899999999986 221 1 


Q ss_pred             ---hc------cceEEEEeccC
Q 031009          149 ---YK------YSWLLVNIYVP  161 (167)
Q Consensus       149 ---~~------~~dilvN~ai~  161 (167)
                         ..      .+|+|||||-.
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi  749 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAI  749 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCC
T ss_pred             HHHHhhcccCCCCcEEEeCccc
Confidence               12      36899998843

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.07  E-value=1.7e-10  Score=88.32  Aligned_cols=68  Identities=18%  Similarity=0.159  Sum_probs=54.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc------cc
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK------YS  152 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~------~~  152 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .            . ++.++++|++|.+ ...+.+      ..
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------E-DLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------S-SSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------c-ceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            689999999999999999999999999999999864 1            1 3478899999976 222222      37


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||+|-.
T Consensus        68 d~li~~ag~   76 (242)
T 1uay_A           68 FAVVSAAGV   76 (242)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEEcccc
Confidence            888888753

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.07  E-value=3.2e-10  Score=84.94  Aligned_cols=73  Identities=25%  Similarity=0.344  Sum_probs=57.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---cceEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---YSWLLV  156 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---~~dilv  156 (167)
                      |+++||||++|||++++++|+++  +|++++|+.+..++..+++    +.   .++.+|++|.+ ...+.+   ..|++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~----~~---~~~~~D~~~~~~~~~~~~~~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV----GA---RALPADLADELEAKALLEEAGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH----TC---EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc----cC---cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence            57999999999999999999998  9999999987776655444    22   78899999977 333333   589999


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      |+|-..
T Consensus        72 ~~ag~~   77 (207)
T 2yut_A           72 HAVGKA   77 (207)
T ss_dssp             ECCCCC
T ss_pred             ECCCcC
Confidence            988543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.07  E-value=3e-10  Score=91.63  Aligned_cols=85  Identities=15%  Similarity=0.114  Sum_probs=64.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCC---ceEEEEeccCCChh-hhhhhccc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE---QHVWVPPSRLVSAP-YNIIYKYS  152 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~Dv~d~~-~~~~~~~~  152 (167)
                      ++++|+++||||+|+||++++++|+++|++|++++|......+....+......   .++.++.+|++|.+ ...+.+..
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            467889999999999999999999999999999999765444444444332110   25899999999987 44455568


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||+|-.
T Consensus       102 d~Vih~A~~  110 (351)
T 3ruf_A          102 DHVLHQAAL  110 (351)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999998854

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.06  E-value=3.8e-10  Score=90.78  Aligned_cols=81  Identities=17%  Similarity=0.204  Sum_probs=59.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH------HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +|+++||||+|+||++++++|+++|++|++++|....      ..+..+++....+. ++.++.+|++|.+ ...+.+  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR-SVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCC-ceEEEECCCCCHHHHHHHHHhc
Confidence            5789999999999999999999999999999885432      22233344332233 5788999999976 333333  


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||+|-.
T Consensus        81 ~~d~vih~A~~   91 (348)
T 1ek6_A           81 SFMAVIHFAGL   91 (348)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            47899998854

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.05  E-value=2.3e-10  Score=91.85  Aligned_cols=83  Identities=20%  Similarity=0.174  Sum_probs=58.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-CceEEEEeccCCChh-hhhhhccceEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      .++|+++||||+|+||++++++|+++|++|+++.|+.+..++.. .+..... ..++.++.+|++|.+ ...+.+..|++
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            46789999999999999999999999999999999876443221 1111000 014788999999876 34444557899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      +|+|.+
T Consensus        82 ih~A~~   87 (337)
T 2c29_D           82 FHVATP   87 (337)
T ss_dssp             EECCCC
T ss_pred             EEeccc
Confidence            998854

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.05  E-value=5.7e-10  Score=95.14  Aligned_cols=83  Identities=20%  Similarity=0.254  Sum_probs=64.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChh---HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAE---RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~  151 (167)
                      .-++|+++||||+||||++++++|+++|++ |++++|+..   ..++..+++... +. ++.++.+|++|.+ ...+.+.
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~-~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GA-RTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-CC-EEEEEEeCCCCHHHHHHHHHH
Confidence            346789999999999999999999999985 999999875   355666666553 43 7899999999986 2222222


Q ss_pred             ------ceEEEEeccC
Q 031009          152 ------SWLLVNIYVP  161 (167)
Q Consensus       152 ------~dilvN~ai~  161 (167)
                            +|++||+|-.
T Consensus       301 i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHhcCCCcEEEECCcc
Confidence                  5899998853

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.05  E-value=5.4e-10  Score=95.92  Aligned_cols=82  Identities=21%  Similarity=0.259  Sum_probs=64.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChh---HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~  151 (167)
                      .-++|+++||||+||||++++++|+++|+ +|++++|+..   ..++..+++... +. ++.++.+|++|.+ ...+.+.
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~-~v~~~~~Dvtd~~~v~~~~~~  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-GC-EVVHAACDVAERDALAALVTA  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-TC-EEEEEECCSSCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-CC-EEEEEEeCCCCHHHHHHHHhc
Confidence            34678999999999999999999999998 6999999864   355666666543 33 7999999999987 3333333


Q ss_pred             --ceEEEEecc
Q 031009          152 --SWLLVNIYV  160 (167)
Q Consensus       152 --~dilvN~ai  160 (167)
                        +|++||+|-
T Consensus       334 ~~ld~VVh~AG  344 (511)
T 2z5l_A          334 YPPNAVFHTAG  344 (511)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCcEEEECCc
Confidence              789999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.04  E-value=8.6e-10  Score=99.11  Aligned_cols=81  Identities=21%  Similarity=0.267  Sum_probs=64.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHH-HCCC-eEEEEeCC---hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFL-KAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~-~~G~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~  150 (167)
                      -++|+++||||++|||+++++.|+ ++|+ +|++++|+   .+..++..++++.. +. ++.++++|++|.+ .+ .+..
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-G~-~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY-GA-EVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHT
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc-CC-cEEEEEeecCCHHHHHHHHHH
Confidence            468999999999999999999999 7998 59999998   45567777777654 44 7999999999987 22 2222


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           -+|++||||-
T Consensus       606 ~~~~~~id~lVnnAG  620 (795)
T 3slk_A          606 IPDEHPLTAVVHAAG  620 (795)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             HHHhCCCEEEEECCC
Confidence                 2789999984

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.04  E-value=5.4e-10  Score=90.35  Aligned_cols=83  Identities=18%  Similarity=0.074  Sum_probs=61.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh----HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYS  152 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~  152 (167)
                      +++|+++||||+|+||++++++|+++|++|++++|+..    .+++..+++....+. .+.++.+|++|.+ ...+.+..
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS-NFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHT-TEEEEECCTTSHHHHHHHHTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCC-ceEEEECCCCCHHHHHHHhcCC
Confidence            56789999999999999999999999999999999753    233322222111112 5888999999976 44444568


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||+|-.
T Consensus       104 d~vih~A~~  112 (352)
T 1sb8_A          104 DYVLHQAAL  112 (352)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCcc
Confidence            899998854

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.03  E-value=2.8e-10  Score=84.76  Aligned_cols=74  Identities=16%  Similarity=0.130  Sum_probs=58.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEe
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+++..++.       .. .++.++.+|++|.+ ...+.+..|+++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   74 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------GP-RPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------SC-CCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------cC-CceEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            47899999999999999999999999999999987654211       01 25788999999976 44444557888888


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      +-.
T Consensus        75 a~~   77 (206)
T 1hdo_A           75 LGT   77 (206)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.02  E-value=1.4e-10  Score=93.40  Aligned_cols=83  Identities=17%  Similarity=0.103  Sum_probs=58.3

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY-  151 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~-  151 (167)
                      +...+++|+++||||+|+||++++++|+++|++|++++|+.....+...++      .++.++.+|++|.+ ...+.+. 
T Consensus        15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~------~~~~~~~~Dl~d~~~~~~~~~~~   88 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH------PNLTFVEGSIADHALVNQLIGDL   88 (333)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             eeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc------CCceEEEEeCCCHHHHHHHHhcc
Confidence            334577889999999999999999999999999999999754321111111      15788999999976 3344444 


Q ss_pred             -ceEEEEeccCc
Q 031009          152 -SWLLVNIYVPS  162 (167)
Q Consensus       152 -~dilvN~ai~~  162 (167)
                       .|++||+|-..
T Consensus        89 ~~D~vih~A~~~  100 (333)
T 2q1w_A           89 QPDAVVHTAASY  100 (333)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCcEEEECceec
Confidence             78999988543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.02  E-value=9.3e-10  Score=85.13  Aligned_cols=74  Identities=12%  Similarity=-0.037  Sum_probs=52.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEE-e--CChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhc---c
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIIC-S--RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYK---Y  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~---~  151 (167)
                      ||+++||||++|||++++++|+++|++|+++ +  |+.+.+++..+++   .+. ++  .  |..+..  .+.+.+   .
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~~~-~~--~--~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---PGT-IA--L--AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---TTE-EE--C--CCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---CCC-cc--c--CHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999 6  9988777665554   121 22  1  333322  111111   3


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      +|++||||-.
T Consensus        73 iD~lv~~Ag~   82 (244)
T 1zmo_A           73 IDTIVSNDYI   82 (244)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            7999999853

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.02  E-value=3.2e-10  Score=85.80  Aligned_cols=71  Identities=15%  Similarity=0.162  Sum_probs=57.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEeccC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVP  161 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~ai~  161 (167)
                      +++||||+|+||++++++|+++|++|++++|+.++..+.       ... .+.++.+|++|.+. ......|++||++-.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~-~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-------LGA-TVATLVKEPLVLTE-ADLDSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------TCT-TSEEEECCGGGCCH-HHHTTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-------cCC-CceEEecccccccH-hhcccCCEEEECCcc
Confidence            599999999999999999999999999999998765432       122 57889999998776 444457888888854

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.02  E-value=4.7e-10  Score=84.48  Aligned_cols=70  Identities=16%  Similarity=0.199  Sum_probs=57.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEeccC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYVP  161 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~ai~  161 (167)
                      +++||||+|+||++++++|+++|++|++++|+.++.++.    .     ..+.++.+|++|.+. ......|++||++-.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~-----~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT----H-----KDINILQKDIFDLTL-SDLSDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH----C-----SSSEEEECCGGGCCH-HHHTTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc----c-----CCCeEEeccccChhh-hhhcCCCEEEECCcC
Confidence            599999999999999999999999999999998765432    1     257889999998776 444457888888754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.01  E-value=1.6e-10  Score=93.97  Aligned_cols=85  Identities=15%  Similarity=0.075  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHH--CCCeEEEEeCChhHHHHH---H---HHHHHHhCCceEEEEeccCCChh-hh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLK--AGDNVIICSRSAERVDSA---V---QSLREEFGEQHVWVPPSRLVSAP-YN  146 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~--~G~~Vi~~~r~~~~~~~~---~---~~l~~~~~~~~~~~~~~Dv~d~~-~~  146 (167)
                      +.+++|+++||||+|+||++++++|++  .|++|++++|+.......   .   .......+ ..+.++.+|++|.+ ..
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIG-FKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTT-CCSEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccc-cCceEEECCCCCHHHHH
Confidence            467899999999999999999999999  999999999965411100   0   00111112 25688999999987 33


Q ss_pred             hh-hccceEEEEeccC
Q 031009          147 II-YKYSWLLVNIYVP  161 (167)
Q Consensus       147 ~~-~~~~dilvN~ai~  161 (167)
                      .+ ....|++||+|..
T Consensus        85 ~~~~~~~D~vih~A~~  100 (362)
T 3sxp_A           85 RLEKLHFDYLFHQAAV  100 (362)
T ss_dssp             HHTTSCCSEEEECCCC
T ss_pred             HhhccCCCEEEECCcc
Confidence            34 4458999998864

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.01  E-value=3e-10  Score=86.15  Aligned_cols=70  Identities=17%  Similarity=0.134  Sum_probs=57.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCC-hh-hhhhhccceEEEEec
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS-AP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d-~~-~~~~~~~~dilvN~a  159 (167)
                      +++||||+|+||++++++|+++|++|++++|+.+..++.          ..+.++++|++| .+ ...+.+..|++||++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence            699999999999999999999999999999998654321          258999999999 65 444555688888887


Q ss_pred             cC
Q 031009          160 VP  161 (167)
Q Consensus       160 i~  161 (167)
                      -.
T Consensus        72 g~   73 (219)
T 3dqp_A           72 GS   73 (219)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.01  E-value=3.1e-10  Score=86.17  Aligned_cols=73  Identities=21%  Similarity=0.276  Sum_probs=59.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEe
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      .|+++||||+|+||++++++|+++|++|++++|+.+..++.        . ..+.++.+|++|.+ ...+.+..|++||+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------N-EHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------C-TTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------c-CceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            36899999999999999999999999999999997654321        1 25889999999977 44455568899998


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      +-+
T Consensus        75 a~~   77 (227)
T 3dhn_A           75 FNP   77 (227)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            744

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.01  E-value=4.2e-10  Score=90.61  Aligned_cols=75  Identities=12%  Similarity=-0.052  Sum_probs=56.5

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccc
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYS  152 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~  152 (167)
                      ++..+++|+++||||+|+||.+++++|+++|++|++++|+.+.              ..+.++.+|++|.+ ...+.+..
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGV   78 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTC
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCC
Confidence            4557889999999999999999999999999999999998754              14778899999977 44455568


Q ss_pred             eEEEEeccCc
Q 031009          153 WLLVNIYVPS  162 (167)
Q Consensus       153 dilvN~ai~~  162 (167)
                      |+++|+|-..
T Consensus        79 d~vih~A~~~   88 (347)
T 4id9_A           79 SAVLHLGAFM   88 (347)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCccc
Confidence            8999988543

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.00  E-value=5.4e-10  Score=104.84  Aligned_cols=87  Identities=25%  Similarity=0.306  Sum_probs=65.8

Q ss_pred             CCCCCCCEEEEeCCCCc-hHHHHHHHHHHCCCeEEEE-eCChhHHHHHHHHHHHHhC--CceEEEEeccCCChh-hhh-h
Q 031009           75 EPMLPPYNVLITGSTKG-IGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFG--EQHVWVPPSRLVSAP-YNI-I  148 (167)
Q Consensus        75 ~~~l~gk~vlITGas~G-IG~aia~~L~~~G~~Vi~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~d~~-~~~-~  148 (167)
                      .+.++||+++||||++| ||++++++|+++|++|+++ +|+.+.+++..+++....+  ..++.++.+|++|.+ ... +
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            34688999999999998 9999999999999999998 5777666666666643321  227899999999976 221 1


Q ss_pred             ----hc--------cceEEEEeccC
Q 031009          149 ----YK--------YSWLLVNIYVP  161 (167)
Q Consensus       149 ----~~--------~~dilvN~ai~  161 (167)
                          ..        .+|++||||-.
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI  575 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAI  575 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCC
T ss_pred             HHHHHhccccccCCCCeEEEECCCc
Confidence                11        36899999853

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.00  E-value=1e-09  Score=88.02  Aligned_cols=79  Identities=15%  Similarity=0.149  Sum_probs=58.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH--HHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA--VQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      +|+++||||+|+||++++++|+++|++|+++.|+.+..++.  ..++. . .. ++.++.+|++|.+ ...+.+..|++|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~-~~~~~~~Dl~d~~~~~~~~~~~D~Vi   85 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E-LG-DLKIFRADLTDELSFEAPIAGCDFVF   85 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G-GS-CEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C-CC-cEEEEecCCCChHHHHHHHcCCCEEE
Confidence            67899999999999999999999999999988876532211  12221 1 12 5788999999876 334444578999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|.+
T Consensus        86 h~A~~   90 (338)
T 2rh8_A           86 HVATP   90 (338)
T ss_dssp             EESSC
T ss_pred             EeCCc
Confidence            98854

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.99  E-value=2.5e-09  Score=88.73  Aligned_cols=82  Identities=21%  Similarity=0.106  Sum_probs=60.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHH-HCCCeEEEEeCChhH------------HHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAER------------VDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~-~~G~~Vi~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      .+.+|++||||+++|||++++..|+ ..|+.++++.+..+.            .....+++++. |. ....+.+|+++.
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~-G~-~a~~i~~Dv~d~  124 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE-GL-YSVTIDGDAFSD  124 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH-TC-CEEEEESCTTSH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc-CC-CceeEeCCCCCH
Confidence            4678999999999999999999998 679999998875432            23344555555 44 589999999997


Q ss_pred             h--hhhhhcc------ceEEEEecc
Q 031009          144 P--YNIIYKY------SWLLVNIYV  160 (167)
Q Consensus       144 ~--~~~~~~~------~dilvN~ai  160 (167)
                      +  .+.+...      +|+|||++-
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A  149 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLA  149 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecc
Confidence            6  2222221      888888764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.99  E-value=3e-10  Score=91.90  Aligned_cols=81  Identities=16%  Similarity=0.061  Sum_probs=61.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~d  153 (167)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+...++.  .+. ++.++.+|++|.+ ...+.+.  .|
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~-~~~~~~~Dl~d~~~~~~~~~~~~~d   82 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VAD-GMQSEIGDIRDQNKLLESIREFQPE   82 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTT-TSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cCC-ceEEEEccccCHHHHHHHHHhcCCC
Confidence            3568899999999999999999999999999999998765433333322  122 5788999999976 3333332  78


Q ss_pred             EEEEecc
Q 031009          154 LLVNIYV  160 (167)
Q Consensus       154 ilvN~ai  160 (167)
                      ++||+|-
T Consensus        83 ~vih~A~   89 (357)
T 1rkx_A           83 IVFHMAA   89 (357)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.99  E-value=2.3e-10  Score=90.99  Aligned_cols=80  Identities=19%  Similarity=0.196  Sum_probs=56.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhHHHHH--HHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSA--VQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      ||+++||||+|+||++++++|+++|++|++++| +.+..++.  ..++... . .++.++.+|++|.+ ...+.+..|++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGA-S-EKLHFFNADLSNPDSFAAAIEGCVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTH-H-HHEEECCCCTTCGGGGHHHHTTCSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhcc-C-CceEEEecCCCCHHHHHHHHcCCCEE
Confidence            578999999999999999999999999999988 54321110  1111100 0 14788999999976 34444557999


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||+|.+
T Consensus        79 ih~A~~   84 (322)
T 2p4h_X           79 FHTASP   84 (322)
T ss_dssp             EECCCC
T ss_pred             EEcCCc
Confidence            999843

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.98  E-value=1.7e-09  Score=86.86  Aligned_cols=38  Identities=24%  Similarity=0.418  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        76 ~~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      +.+++|+++||||  ++|||++++++|+++|++|++++|+
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            3578999999999  8999999999999999999999875

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.98  E-value=8.6e-11  Score=95.10  Aligned_cols=65  Identities=15%  Similarity=0.091  Sum_probs=45.0

Q ss_pred             CCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChh---------HHHHHHHHHHHHh-CCceEEEEeccCCCh
Q 031009           79 PPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAE---------RVDSAVQSLREEF-GEQHVWVPPSRLVSA  143 (167)
Q Consensus        79 ~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~---------~~~~~~~~l~~~~-~~~~~~~~~~Dv~d~  143 (167)
                      ++|+++|||+++  |||++++++|+++|++|++.++++.         .++.....+.... ....+.++++|+++.
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   77 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFD   77 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCS
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhccccccccccccccccc
Confidence            478999999986  9999999999999999998877652         1111111111101 112478899999876

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.97  E-value=1.1e-09  Score=81.98  Aligned_cols=60  Identities=13%  Similarity=0.148  Sum_probs=49.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhcc--ceEEEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYKY--SWLLVN  157 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~~--~dilvN  157 (167)
                      +++||||++|||++++++|+ +|++|++++|+.+                   ++.+|++|.+ .+. +...  .|++||
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            69999999999999999999 9999999999863                   3678999976 222 3332  789999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      +|-.
T Consensus        65 ~ag~   68 (202)
T 3d7l_A           65 ATGS   68 (202)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8853

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.96  E-value=3.2e-09  Score=87.01  Aligned_cols=84  Identities=14%  Similarity=0.094  Sum_probs=58.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH----------------HHHHHHHHHhCCceEEEEeccC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD----------------SAVQSLREEFGEQHVWVPPSRL  140 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~Dv  140 (167)
                      ..++++++||||+|+||++++++|+++|++|++++|......                +...++....+. ++.++.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK-SIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCC-CCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCC-ceEEEECCC
Confidence            456789999999999999999999999999999998754321                112222222233 578899999


Q ss_pred             CChh-hhhhhcc--ceEEEEeccC
Q 031009          141 VSAP-YNIIYKY--SWLLVNIYVP  161 (167)
Q Consensus       141 ~d~~-~~~~~~~--~dilvN~ai~  161 (167)
                      +|.+ ...+.+.  .|++||+|-.
T Consensus        87 ~d~~~~~~~~~~~~~D~Vih~A~~  110 (404)
T 1i24_A           87 CDFEFLAESFKSFEPDSVVHFGEQ  110 (404)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSC
T ss_pred             CCHHHHHHHHhccCCCEEEECCCC
Confidence            9976 3334443  7899998854

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.96  E-value=1.2e-10  Score=90.22  Aligned_cols=66  Identities=20%  Similarity=0.038  Sum_probs=50.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh----ccceEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY----KYSWLL  155 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~----~~~dil  155 (167)
                      |+++||||++|||++++++|+++|++|++++|+++++++              . +++|++|.+ .+.+.    ..+|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHhCCCCCEE
Confidence            689999999999999999999999999999998754211              1 667888765 22222    236899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||||-.
T Consensus        67 v~~Ag~   72 (257)
T 1fjh_A           67 VLCAGL   72 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998853

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.96  E-value=1.2e-09  Score=96.30  Aligned_cols=85  Identities=15%  Similarity=0.137  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YS  152 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~  152 (167)
                      +.+++|+++||||+|+||++++++|+++|++|++++|......+..+++....+. .+.++.+|++|.+ ...+.+  ..
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~v~~v~~Dl~d~~~l~~~~~~~~~   85 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH-HIPFYEVDLCDRKGLEKVFKEYKI   85 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTS-CCCEEECCTTCHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCC-ceEEEEcCCCCHHHHHHHHHhCCC
Confidence            4577899999999999999999999999999999998754332223333322233 5778899999976 333333  47


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||+|-.
T Consensus        86 D~Vih~A~~   94 (699)
T 1z45_A           86 DSVIHFAGL   94 (699)
T ss_dssp             CEEEECCSC
T ss_pred             CEEEECCcc
Confidence            899998854

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.96  E-value=2.3e-09  Score=85.87  Aligned_cols=78  Identities=15%  Similarity=0.110  Sum_probs=58.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ceEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SWLLV  156 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~dilv  156 (167)
                      |+++||||+|+||++++++|+++|++|++++|.. ....+...++... +  ++.++.+|++|.+ ...+.+.  .|++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~--~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-G--NFEFVHGDIRNKNDVTRLITKYMPDSCF   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-C--CCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-C--ceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence            5799999999999999999999999999999853 2222233344321 2  4788899999976 3444444  78999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|-.
T Consensus        79 h~A~~   83 (347)
T 1orr_A           79 HLAGQ   83 (347)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            98854

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.96  E-value=1.4e-09  Score=87.26  Aligned_cols=79  Identities=19%  Similarity=0.196  Sum_probs=55.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN~  158 (167)
                      +++||||+|+||++++++|+++|++|++++|......+..+++....+. ++.++.+|++|.+ ...+.+  ..|++||+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK-HPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTS-CCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCC-cceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            6999999999999999999999999999986432211122333332233 5778899999976 233332  37999998


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |-.
T Consensus        81 A~~   83 (338)
T 1udb_A           81 AGL   83 (338)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            854

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.95  E-value=2.2e-09  Score=84.80  Aligned_cols=77  Identities=16%  Similarity=0.118  Sum_probs=58.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-------hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-------ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~  151 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+.       ++.+.. .++..  .  .+.++++|++|.+ ...+.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~--~v~~v~~D~~d~~~l~~~~~~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--L--GVILLEGDINDHETLVKAIKQ   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--T--TCEEEECCTTCHHHHHHHHTT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--C--CCEEEEeCCCCHHHHHHHHhC
Confidence            46799999999999999999999999999999986       443332 33322  1  3778999999976 4445556


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||++-.
T Consensus        77 ~d~vi~~a~~   86 (307)
T 2gas_A           77 VDIVICAAGR   86 (307)
T ss_dssp             CSEEEECSSS
T ss_pred             CCEEEECCcc
Confidence            7888888753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.94  E-value=1.5e-09  Score=87.22  Aligned_cols=79  Identities=11%  Similarity=0.162  Sum_probs=60.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCC-------CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN  146 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G-------~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~  146 (167)
                      ...+++|+++||||+|+||.+++++|+++|       ++|++++|+.+...+       ..+ .++.++.+|++|.+ ..
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~-~~~~~~~~Dl~d~~~~~   80 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFS-GAVDARAADLSAPGEAE   80 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCC-SEEEEEECCTTSTTHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccC-CceeEEEcCCCCHHHHH
Confidence            335788899999999999999999999999       899999997643211       112 26888999999976 33


Q ss_pred             hhh-ccceEEEEeccC
Q 031009          147 IIY-KYSWLLVNIYVP  161 (167)
Q Consensus       147 ~~~-~~~dilvN~ai~  161 (167)
                      .+. ...|++||+|-.
T Consensus        81 ~~~~~~~d~vih~A~~   96 (342)
T 2hrz_A           81 KLVEARPDVIFHLAAI   96 (342)
T ss_dssp             HHHHTCCSEEEECCCC
T ss_pred             HHHhcCCCEEEECCcc
Confidence            333 357899998854

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.92  E-value=1.4e-09  Score=90.49  Aligned_cols=85  Identities=13%  Similarity=0.058  Sum_probs=60.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh---HHHHHHHHHHHH--------hCCceEEEEeccCCChh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---RVDSAVQSLREE--------FGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~---~~~~~~~~l~~~--------~~~~~~~~~~~Dv~d~~  144 (167)
                      ...++|+++||||+|+||++++++|++.|++|++++|+.+   ..+++.+++...        .+. ++.++.+|++|.+
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLS-NIEVIVGDFECMD  143 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHT-TEEEEEECC---C
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccC-ceEEEeCCCCCcc
Confidence            3566789999999999999999999999999999999876   333333333221        122 6899999999965


Q ss_pred             hhhhhccceEEEEeccC
Q 031009          145 YNIIYKYSWLLVNIYVP  161 (167)
Q Consensus       145 ~~~~~~~~dilvN~ai~  161 (167)
                      ........|++||+|..
T Consensus       144 ~l~~~~~~d~Vih~A~~  160 (427)
T 4f6c_A          144 DVVLPENMDTIIHAGAR  160 (427)
T ss_dssp             CCCCSSCCSEEEECCCC
T ss_pred             cCCCcCCCCEEEECCcc
Confidence            22244458899998854

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.92  E-value=8.8e-10  Score=89.61  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=60.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCC-Chh-hhhhhcc
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLV-SAP-YNIIYKY  151 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-d~~-~~~~~~~  151 (167)
                      +..+++|+++||||+|+||.+++++|+++ |++|++++|+.+...+...       ...+.++.+|++ |.+ ...+.+.
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~~   91 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVKK   91 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhcc
Confidence            33567889999999999999999999998 8999999998765432211       125899999999 765 3444556


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|++||+|..
T Consensus        92 ~d~Vih~A~~  101 (372)
T 3slg_A           92 CDVILPLVAI  101 (372)
T ss_dssp             CSEEEECBCC
T ss_pred             CCEEEEcCcc
Confidence            8899998754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.91  E-value=5.8e-09  Score=88.35  Aligned_cols=86  Identities=21%  Similarity=0.196  Sum_probs=62.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHC---CCeEEEEeCChhHHHHHHHHHH---------------HHhCCceEEEE
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKA---GDNVIICSRSAERVDSAVQSLR---------------EEFGEQHVWVP  136 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~---G~~Vi~~~r~~~~~~~~~~~l~---------------~~~~~~~~~~~  136 (167)
                      ....++|+|+||||+|+||.+++++|++.   |++|++++|+.+.... .+.+.               ..... ++.++
T Consensus        68 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~-~v~~v  145 (478)
T 4dqv_A           68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAAD-RLEVV  145 (478)
T ss_dssp             CCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTT-TEEEE
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccC-ceEEE
Confidence            34577899999999999999999999999   9999999998764322 12221               11222 69999


Q ss_pred             eccCCChh-------hhhhhccceEEEEeccCc
Q 031009          137 PSRLVSAP-------YNIIYKYSWLLVNIYVPS  162 (167)
Q Consensus       137 ~~Dv~d~~-------~~~~~~~~dilvN~ai~~  162 (167)
                      .+|+++..       .....+..|++||+|...
T Consensus       146 ~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~  178 (478)
T 4dqv_A          146 AGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMV  178 (478)
T ss_dssp             ECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSC
T ss_pred             EeECCCcccCCCHHHHHHHHcCCCEEEECcccc
Confidence            99998542       233334589999988653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.91  E-value=2.6e-09  Score=86.59  Aligned_cols=82  Identities=21%  Similarity=0.137  Sum_probs=53.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHh--CCceEEEEeccCCChh-hhhhhcc--ce
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-SAVQSLREEF--GEQHVWVPPSRLVSAP-YNIIYKY--SW  153 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~Dv~d~~-~~~~~~~--~d  153 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... +..+++....  ...++.++.+|++|.+ ...+.+.  .|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            478999999999999999999999999999999865421 1112221110  0125888999999976 3333332  68


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||+|..
T Consensus        81 ~vih~A~~   88 (372)
T 1db3_A           81 EVYNLGAM   88 (372)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998854

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.90  E-value=2.4e-09  Score=86.52  Aligned_cols=79  Identities=22%  Similarity=0.185  Sum_probs=58.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh----hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--  150 (167)
                      +..++++||||+|+||++++++|++.|++|++++|+.    ++.+ ...++..   . .+.++.+|++|.+ ...+.+  
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~---~-~v~~~~~Dl~d~~~l~~~~~~~   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED---K-GAIIVYGLINEQEAMEKILKEH   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH---T-TCEEEECCTTCHHHHHHHHHHT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh---C-CcEEEEeecCCHHHHHHHHhhC
Confidence            3456899999999999999999999999999999976    2222 2223322   2 5788999999976 444445  


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|++||++-.
T Consensus        83 ~~d~Vi~~a~~   93 (346)
T 3i6i_A           83 EIDIVVSTVGG   93 (346)
T ss_dssp             TCCEEEECCCG
T ss_pred             CCCEEEECCch
Confidence            57888888743

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.90  E-value=5.2e-09  Score=83.40  Aligned_cols=78  Identities=14%  Similarity=0.094  Sum_probs=58.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-h----HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccce
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-E----RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSW  153 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~d  153 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+. .    ...+...++..  .  .+.++.+|++|.+ ...+.+..|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~--~v~~v~~D~~d~~~l~~a~~~~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--M--GVTIIEGEMEEHEKMVSVLKQVD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--T--TCEEEECCTTCHHHHHHHHTTCS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--C--CcEEEEecCCCHHHHHHHHcCCC
Confidence            35799999999999999999999999999999986 1    12222223322  2  4788999999976 444555578


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      +++|++-.
T Consensus        80 ~vi~~a~~   87 (321)
T 3c1o_A           80 IVISALPF   87 (321)
T ss_dssp             EEEECCCG
T ss_pred             EEEECCCc
Confidence            88888743

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.90  E-value=3.4e-09  Score=84.43  Aligned_cols=77  Identities=17%  Similarity=0.173  Sum_probs=58.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEec
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      |+++||||+|+||++++++|+++|++|++++|+.+...+...++...    .+.++.+|++|.+ ...+.+..|+++|++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~----~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL----GAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT----TCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC----CCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            57999999999999999999999999999999875222222333221    3778999999976 444555678888887


Q ss_pred             cC
Q 031009          160 VP  161 (167)
Q Consensus       160 i~  161 (167)
                      -.
T Consensus        88 ~~   89 (318)
T 2r6j_A           88 AF   89 (318)
T ss_dssp             CG
T ss_pred             ch
Confidence            43

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.90  E-value=1.1e-09  Score=87.04  Aligned_cols=39  Identities=26%  Similarity=0.427  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        76 ~~l~gk~vlITGas--~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +++++|+++||||+  +|||++++++|+++|++|++++|++
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~   44 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccc
Confidence            45889999999999  9999999999999999999998763

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.89  E-value=6.2e-09  Score=85.16  Aligned_cols=83  Identities=14%  Similarity=0.178  Sum_probs=59.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HCCCeEEEEeCChhH---------HHHHHHHHHHHhCC---ce---EEEEeccCCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAER---------VDSAVQSLREEFGE---QH---VWVPPSRLVSA  143 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~-~~G~~Vi~~~r~~~~---------~~~~~~~l~~~~~~---~~---~~~~~~Dv~d~  143 (167)
                      +++++||||+|+||++++++|+ ++|++|++++|+...         .+.+...++...+.   ..   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 999999999987543         33332223222111   13   78899999997


Q ss_pred             h-hhhhhc--c-ceEEEEeccCc
Q 031009          144 P-YNIIYK--Y-SWLLVNIYVPS  162 (167)
Q Consensus       144 ~-~~~~~~--~-~dilvN~ai~~  162 (167)
                      + ...+.+  . .|++||+|-..
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~  104 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFL  104 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCcc
Confidence            6 333333  3 79999988543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.88  E-value=5e-09  Score=82.81  Aligned_cols=81  Identities=16%  Similarity=0.108  Sum_probs=57.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH--HHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV--DSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+....  .+..+.+...... .+.++.+|++|.+ ...+.+..|+++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~-~v~~v~~D~~d~~~l~~~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS-GANIVHGSIDDHASLVEAVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTT-TCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhC-CCEEEEeccCCHHHHHHHHcCCCEEE
Confidence            46799999999999999999999999999999974321  1111122211122 4788999999976 344445578888


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |++-.
T Consensus        83 ~~a~~   87 (308)
T 1qyc_A           83 STVGS   87 (308)
T ss_dssp             ECCCG
T ss_pred             ECCcc
Confidence            87743

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.87  E-value=2.8e-09  Score=85.55  Aligned_cols=39  Identities=26%  Similarity=0.428  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        76 ~~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +.++||+++||||  ++|||++++++|+++|++|++++|++
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~   45 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP   45 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccc
Confidence            3588999999999  89999999999999999999999864

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.87  E-value=5.4e-10  Score=89.95  Aligned_cols=87  Identities=14%  Similarity=0.125  Sum_probs=57.8

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      .++.+++|+++||||+|+||.+++++|+++|  ++|++.+|......  ...+........+.++.+|++|.+ ...+.+
T Consensus        18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~   95 (346)
T 4egb_A           18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIK   95 (346)
T ss_dssp             ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHh
Confidence            3456788999999999999999999999999  77888887642110  011111112236899999999987 334444


Q ss_pred             c--ceEEEEeccCc
Q 031009          151 Y--SWLLVNIYVPS  162 (167)
Q Consensus       151 ~--~dilvN~ai~~  162 (167)
                      .  .|++||+|-..
T Consensus        96 ~~~~d~Vih~A~~~  109 (346)
T 4egb_A           96 ERDVQVIVNFAAES  109 (346)
T ss_dssp             HHTCCEEEECCCCC
T ss_pred             hcCCCEEEECCccc
Confidence            3  88999988643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.86  E-value=6.7e-09  Score=82.04  Aligned_cols=75  Identities=16%  Similarity=0.164  Sum_probs=58.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVN  157 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN  157 (167)
                      +|+++||||+|+||++++++|+++| ++|++++|+.+....  .++..  .  .+.++.+|++|.+ ...+.+..|+++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~--~~~~~~~D~~d~~~l~~~~~~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--Q--GAEVVQGDQDDQVIMELALNGAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--T--TCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--C--CCEEEEecCCCHHHHHHHHhcCCEEEE
Confidence            5789999999999999999999999 999999998765421  22322  1  3678899999976 4445555788888


Q ss_pred             ecc
Q 031009          158 IYV  160 (167)
Q Consensus       158 ~ai  160 (167)
                      ++-
T Consensus        79 ~a~   81 (299)
T 2wm3_A           79 VTN   81 (299)
T ss_dssp             CCC
T ss_pred             eCC
Confidence            763

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.86  E-value=3e-09  Score=84.58  Aligned_cols=73  Identities=16%  Similarity=0.117  Sum_probs=55.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~d  153 (167)
                      ..+.|+++||||+|+||++++++|+++|++|++++|+.+. +.    +       .+.++.+|++|.+ ...+.+.  .|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~~~~d   76 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISDIKPD   76 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHhcCCC
Confidence            3456789999999999999999999999999999998754 21    1       3778899999976 3333333  78


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||+|-.
T Consensus        77 ~vih~A~~   84 (321)
T 2pk3_A           77 YIFHLAAK   84 (321)
T ss_dssp             EEEECCSC
T ss_pred             EEEEcCcc
Confidence            99998854

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.86  E-value=1.9e-09  Score=88.09  Aligned_cols=79  Identities=14%  Similarity=0.177  Sum_probs=60.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~di  154 (167)
                      .+++|+++||||+|+||++++++|+++| ++|++++|+.+...+   .+.   ....+.++.+|++|.+ ...+.+..|+
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~  102 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDDALLASLQDEYDY  102 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCHHHHHHCCSCCSE
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCHHHHHHHhhCCCE
Confidence            4678899999999999999999999999 999999997653211   111   1225888999999976 3444456889


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||+|-.
T Consensus       103 Vih~A~~  109 (377)
T 2q1s_A          103 VFHLATY  109 (377)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998854

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.85  E-value=3.4e-09  Score=84.74  Aligned_cols=81  Identities=19%  Similarity=0.038  Sum_probs=56.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH-HHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ce
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD-SAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SW  153 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~d  153 (167)
                      -++++++||||+|+||++++++|+++|++|++++|+.+... ...+.+.   ....+.++.+|++|.+ ...+.+.  .|
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   88 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKAQPQ   88 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence            45678999999999999999999999999999999765321 1111111   1125888999999976 3333332  68


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||+|-.
T Consensus        89 ~Vih~A~~   96 (335)
T 1rpn_A           89 EVYNLAAQ   96 (335)
T ss_dssp             EEEECCSC
T ss_pred             EEEECccc
Confidence            99998754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.84  E-value=7.7e-09  Score=81.90  Aligned_cols=77  Identities=16%  Similarity=0.132  Sum_probs=57.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-----hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccce
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-----ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSW  153 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~d  153 (167)
                      .|+++||||+|+||++++++|+++|++|++++|+.     ++.+. ..++.   .. .+.++.+|++|.+ ...+.+..|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~---~~-~~~~~~~D~~d~~~l~~~~~~~d   78 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK---QL-GAKLIEASLDDHQRLVDALKQVD   78 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH---TT-TCEEECCCSSCHHHHHHHHTTCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH---hC-CeEEEeCCCCCHHHHHHHHhCCC
Confidence            46799999999999999999999999999999984     22221 22221   22 4788999999976 444555678


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      +++|++-.
T Consensus        79 ~vi~~a~~   86 (313)
T 1qyd_A           79 VVISALAG   86 (313)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            88888754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.84  E-value=5.6e-10  Score=85.83  Aligned_cols=66  Identities=24%  Similarity=0.175  Sum_probs=50.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----cceEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----YSWLL  155 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----~~dil  155 (167)
                      |+++||||+||||++++++|+++|++|++++|+.+..+.               .+.+|++|.+ ...+.+    ..|++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~~~~~d~v   66 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRCGGVLDGL   66 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHcCCCccEE
Confidence            689999999999999999999999999999998653210               1567877765 222222    47888


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||+|-.
T Consensus        67 i~~Ag~   72 (255)
T 2dkn_A           67 VCCAGV   72 (255)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            888753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.81  E-value=4e-09  Score=86.04  Aligned_cols=80  Identities=18%  Similarity=0.040  Sum_probs=55.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--S  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~  152 (167)
                      |+++||||+|+||.+++++|+++|++|++++|+.+.     ++....++..... ..+.++.+|++|.+ ...+.+.  .
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNK-ALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccc-cceEEEECCCCCHHHHHHHHHhcCC
Confidence            789999999999999999999999999999997643     2222122211111 04788999999976 3333332  6


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||+|-.
T Consensus       108 d~Vih~A~~  116 (381)
T 1n7h_A          108 DEVYNLAAQ  116 (381)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCcc
Confidence            899998854

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.81  E-value=4.6e-09  Score=85.98  Aligned_cols=76  Identities=13%  Similarity=-0.011  Sum_probs=58.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      .++|+++||||+|+||++++++|+++|++|++++|+.+.....      . .. .+.++.+|++|.+ ...+.+..|++|
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~-~~-~v~~~~~Dl~d~~~~~~~~~~~d~Vi   98 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D-MF-CDEFHLVDLRVMENCLKVTEGVDHVF   98 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G-GT-CSEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c-cC-CceEEECCCCCHHHHHHHhCCCCEEE
Confidence            3567999999999999999999999999999999986542210      0 11 4678899999976 444455688999


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|-.
T Consensus        99 h~A~~  103 (379)
T 2c5a_A           99 NLAAD  103 (379)
T ss_dssp             ECCCC
T ss_pred             ECcee
Confidence            98754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.81  E-value=5.1e-09  Score=83.84  Aligned_cols=73  Identities=11%  Similarity=0.072  Sum_probs=55.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEec
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      ++++||||+|+||++++++|+++|++|++++|+.+..++    +..    ..+.++.+|++|.+ ...+.+..|++||+|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a   85 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY----LEPECRVAEMLDHAGLERALRGLDGVIFSA   85 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG----GCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc----CCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            379999999999999999999999999999998765432    211    14778899999976 444445588999987


Q ss_pred             cC
Q 031009          160 VP  161 (167)
Q Consensus       160 i~  161 (167)
                      -.
T Consensus        86 ~~   87 (342)
T 2x4g_A           86 GY   87 (342)
T ss_dssp             --
T ss_pred             cc
Confidence            53

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.80  E-value=5.1e-09  Score=85.28  Aligned_cols=80  Identities=19%  Similarity=0.123  Sum_probs=55.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--S  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~  152 (167)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     ++....++....+. .+.++.+|++|.+ ...+.+.  .
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEG-NMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCC-CceEEEccCCCHHHHHHHHHhcCC
Confidence            789999999999999999999999999999997542     22111111100112 5788999999976 2333332  6


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||+|-.
T Consensus       104 d~vih~A~~  112 (375)
T 1t2a_A          104 TEIYNLGAQ  112 (375)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCCc
Confidence            899998754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.79  E-value=3.4e-09  Score=83.96  Aligned_cols=72  Identities=14%  Similarity=0.152  Sum_probs=55.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEecc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYV  160 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~ai  160 (167)
                      |+++||||+|+||++++++|+++|++|++++|+.+...+..       . ..+.++.+|++|.+.....+. |++||+|-
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~-~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------N-PSAELHVRDLKDYSWGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------C-TTSEEECCCTTSTTTTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------C-CCceEEECccccHHHHhhcCC-CEEEECCC
Confidence            47999999999999999999999999999999765432111       1 257889999999773323333 89999885


Q ss_pred             C
Q 031009          161 P  161 (167)
Q Consensus       161 ~  161 (167)
                      .
T Consensus        72 ~   72 (312)
T 3ko8_A           72 N   72 (312)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.77  E-value=4e-09  Score=84.38  Aligned_cols=79  Identities=13%  Similarity=0.083  Sum_probs=56.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChh--HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccce
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE--RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSW  153 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~d  153 (167)
                      ++++++||||+|+||++++++|+++|  ++|++++|...  ..+.. .++.   ...++.++.+|++|.+ ...+....|
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d   77 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADYELVKELVRKVD   77 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHTCS
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCHHHHHHHhhCCC
Confidence            34679999999999999999999987  89999998642  11111 1111   1125888999999976 333445588


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||+|-.
T Consensus        78 ~vih~A~~   85 (336)
T 2hun_A           78 GVVHLAAE   85 (336)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998854

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.77  E-value=6.1e-09  Score=81.52  Aligned_cols=73  Identities=21%  Similarity=0.279  Sum_probs=57.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVN  157 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN  157 (167)
                      |+++||||+|+||++++++|+++  |++|++++|+.+..++    +..  .  .+.++.+|++|.+ ...+.+..|+++|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----l~~--~--~~~~~~~D~~d~~~l~~~~~~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST----LAD--Q--GVEVRHGDYNQPESLQKAFAGVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH----HHH--T--TCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH----Hhh--c--CCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence            46999999999999999999999  9999999998765433    222  1  3678899999976 4444555789998


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      ++-.
T Consensus        73 ~a~~   76 (287)
T 2jl1_A           73 ISGP   76 (287)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            8754

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.76  E-value=4.3e-09  Score=78.91  Aligned_cols=69  Identities=22%  Similarity=0.058  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhccceEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYKYSWLL  155 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~~~dil  155 (167)
                      .+|+++||||+|+||++++++|+++|+  +|++++|+++.          . . ..+.++.+|++|.+. ....  .|++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~-~-~~~~~~~~D~~~~~~~~~~~--~d~v   69 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E-H-PRLDNPVGPLAELLPQLDGS--IDTA   69 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C-C-TTEECCBSCHHHHGGGCCSC--CSEE
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c-C-CCceEEeccccCHHHHHHhh--hcEE
Confidence            467899999999999999999999998  99999998754          0 1 257888999988652 2222  7888


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||++-.
T Consensus        70 i~~a~~   75 (215)
T 2a35_A           70 FCCLGT   75 (215)
T ss_dssp             EECCCC
T ss_pred             EECeee
Confidence            988754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.74  E-value=1.4e-08  Score=100.30  Aligned_cols=81  Identities=27%  Similarity=0.306  Sum_probs=61.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHH---HHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERV---DSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-  150 (167)
                      -.+|+++||||++|||+++++.|+++|++ |++++|+..+.   .+..+++... +. ++.++.+|++|.+ .+. +.. 
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~-~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-GV-QVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-TC-EEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-CC-EEEEEecCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999997 88888875433   3445555443 44 7899999999986 222 111 


Q ss_pred             ----cceEEEEecc
Q 031009          151 ----YSWLLVNIYV  160 (167)
Q Consensus       151 ----~~dilvN~ai  160 (167)
                          -+|++||||-
T Consensus      1960 ~~~g~id~lVnnAg 1973 (2512)
T 2vz8_A         1960 TQLGPVGGVFNLAM 1973 (2512)
T ss_dssp             HHHSCEEEEEECCC
T ss_pred             HhcCCCcEEEECCC
Confidence                2899999984

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.74  E-value=8.5e-09  Score=82.84  Aligned_cols=78  Identities=13%  Similarity=0.156  Sum_probs=57.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhH-HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAER-VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      .|+++||||+|+||++++++|+++  |++|++++|+... ..+...++   .+ ..+.++.+|++|.+ ...+.+..|++
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI---LG-DRVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG---CS-SSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh---cc-CCeEEEECCCCCHHHHHHHhhcCCEE
Confidence            368999999999999999999998  8999999986421 11111111   11 26888999999976 34444456899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||+|-.
T Consensus        80 ih~A~~   85 (348)
T 1oc2_A           80 VHYAAE   85 (348)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            998854

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.73  E-value=1.1e-08  Score=81.29  Aligned_cols=66  Identities=23%  Similarity=0.294  Sum_probs=39.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLV  156 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilv  156 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.             . .  ++.+|++|.+ ...+.+  ..|++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~-~--~~~~Dl~d~~~~~~~~~~~~~d~vi   65 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------P-K--FEQVNLLDSNAVHHIIHDFQPHVIV   65 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------C-C--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence            5789999999999999999999999999999986532             1 1  5778998866 223333  278899


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      |+|-.
T Consensus        66 h~A~~   70 (315)
T 2ydy_A           66 HCAAE   70 (315)
T ss_dssp             ECC--
T ss_pred             ECCcc
Confidence            98754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.72  E-value=3.4e-08  Score=78.35  Aligned_cols=71  Identities=15%  Similarity=0.114  Sum_probs=55.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEe
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+....+     +.      .+.++.+|++ .+ ...+.+..|++||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~------~~~~~~~Dl~-~~~~~~~~~~~d~Vih~   69 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN------DYEYRVSDYT-LEDLINQLNDVDAVVHL   69 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC------ceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence            468999999999999999999999999999999843321     21      4788999999 65 44455568899998


Q ss_pred             ccCc
Q 031009          159 YVPS  162 (167)
Q Consensus       159 ai~~  162 (167)
                      |-..
T Consensus        70 a~~~   73 (311)
T 3m2p_A           70 AATR   73 (311)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            8653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.72  E-value=4.4e-08  Score=79.86  Aligned_cols=76  Identities=16%  Similarity=0.147  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEecc-CCChh-hhhhhccceEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSR-LVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-v~d~~-~~~~~~~~dilv  156 (167)
                      .+|+++||||+|+||++++++|+++|++|++++|+.+...  .+++..  . ..+.++.+| ++|.+ ...+.+..|+++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~--~-~~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA--I-PNVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT--S-TTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh--c-CCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            4678999999999999999999999999999999876542  122321  1 147888999 99976 344445567777


Q ss_pred             Eec
Q 031009          157 NIY  159 (167)
Q Consensus       157 N~a  159 (167)
                      +++
T Consensus        79 ~~a   81 (352)
T 1xgk_A           79 INT   81 (352)
T ss_dssp             ECC
T ss_pred             EcC
Confidence            665

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.72  E-value=1.5e-08  Score=80.83  Aligned_cols=73  Identities=14%  Similarity=0.181  Sum_probs=55.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVN  157 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN  157 (167)
                      |+++||||+|+||++++++|+++|++|++++|+.....   +.+    .. .+.++.+|++|.+ ...+.+  ..|++||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI----TE-GAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS----CT-TSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc----CC-CcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            57999999999999999999999999999998754321   111    11 4678899999976 333333  5789999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      +|-.
T Consensus        74 ~a~~   77 (330)
T 2c20_A           74 FAAD   77 (330)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            8754

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=98.71  E-value=2e-09  Score=83.93  Aligned_cols=71  Identities=15%  Similarity=0.124  Sum_probs=56.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEe
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      +|+++||||+|+||++++++|+++|++|++++|+.+...          .. .+.++.+|++|.+ ...+.+..|++||+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~-~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   70 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------EA-HEEIVACDLADAQAVHDLVKDCDGIIHL   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------CT-TEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------CC-CccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence            368999999999999999999999999999999865310          11 4688999999976 44445568899998


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |-.
T Consensus        71 a~~   73 (267)
T 3ay3_A           71 GGV   73 (267)
T ss_dssp             CSC
T ss_pred             CcC
Confidence            754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.71  E-value=1.1e-08  Score=82.34  Aligned_cols=80  Identities=16%  Similarity=0.192  Sum_probs=55.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceE
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWL  154 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~di  154 (167)
                      ..++++|+++||||+|+||++++++|+++|++|++++|+.....+...++   ....++.++.+|+.+..    ....|+
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~----~~~~d~   94 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL----YIEVDQ   94 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC----CCCCSE
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh----hcCCCE
Confidence            34577899999999999999999999999999999998643211111111   11225888999998764    224688


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||+|-.
T Consensus        95 vih~A~~  101 (343)
T 2b69_A           95 IYHLASP  101 (343)
T ss_dssp             EEECCSC
T ss_pred             EEECccc
Confidence            8888754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.70  E-value=1.4e-08  Score=81.19  Aligned_cols=73  Identities=15%  Similarity=0.150  Sum_probs=55.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh-h-hhhhhccceEEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA-P-YNIIYKYSWLLVN  157 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~-~~~~~~~~dilvN  157 (167)
                      |+++||||+|+||++++++|+++ |++|++++|+.+..++..       ....+.++.+|++|. + ...+.+..|++||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            46999999999999999999998 899999999876543211       112588899999984 3 3334445788898


Q ss_pred             ecc
Q 031009          158 IYV  160 (167)
Q Consensus       158 ~ai  160 (167)
                      +|.
T Consensus        74 ~A~   76 (345)
T 2bll_A           74 LVA   76 (345)
T ss_dssp             CBC
T ss_pred             ccc
Confidence            874

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.70  E-value=8.1e-08  Score=65.26  Aligned_cols=72  Identities=10%  Similarity=0.022  Sum_probs=55.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      .+++++|+|+ |++|+.+++.|.+.| ++|++++|++++.+...     . .  .+.++.+|+.+.+ ........|+++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----~-~--~~~~~~~d~~~~~~~~~~~~~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----R-M--GVATKQVDAKDEAGLAKALGGFDAVI   74 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----T-T--TCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----h-C--CCcEEEecCCCHHHHHHHHcCCCEEE
Confidence            3568999999 999999999999999 89999999987665432     1 1  3567888999865 333445578888


Q ss_pred             Eec
Q 031009          157 NIY  159 (167)
Q Consensus       157 N~a  159 (167)
                      |++
T Consensus        75 ~~~   77 (118)
T 3ic5_A           75 SAA   77 (118)
T ss_dssp             ECS
T ss_pred             ECC
Confidence            876

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.70  E-value=1e-08  Score=80.49  Aligned_cols=72  Identities=21%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEec
Q 031009           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      +++||||+|+||++++++|.+. |++|++++|+.++..+.       ... .+.++.+|++|.+ ...+.+..|+++|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~~~-~v~~~~~D~~d~~~l~~~~~~~d~vi~~a   73 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------WRG-KVSVRQLDYFNQESMVEAFKGMDTVVFIP   73 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------GBT-TBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------hhC-CCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            4999999999999999999998 89999999998754321       112 5888999999977 445555678888887


Q ss_pred             cC
Q 031009          160 VP  161 (167)
Q Consensus       160 i~  161 (167)
                      -.
T Consensus        74 ~~   75 (289)
T 3e48_A           74 SI   75 (289)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.68  E-value=2.8e-08  Score=77.99  Aligned_cols=69  Identities=22%  Similarity=0.233  Sum_probs=55.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc-ceEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY-SWLLV  156 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~-~dilv  156 (167)
                      ++|+++||| +|+||++++++|+++|++|++++|+.+.+           . ..+.++.+|++|.+ ...+.+. .|++|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~-~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   68 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------P-AGVQTLIADVTRPDTLASIVHLRPEILV   68 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------C-TTCCEEECCTTCGGGCTTGGGGCCSEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------c-cCCceEEccCCChHHHHHhhcCCCCEEE
Confidence            456899999 59999999999999999999999987542           1 25788899999976 3334444 89999


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      |+|-
T Consensus        69 h~a~   72 (286)
T 3gpi_A           69 YCVA   72 (286)
T ss_dssp             ECHH
T ss_pred             EeCC
Confidence            9874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.68  E-value=1.7e-08  Score=78.84  Aligned_cols=71  Identities=15%  Similarity=0.198  Sum_probs=55.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEec
Q 031009           83 VLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      ++||||+|+||++++++|+++  |++|++++|+.+..++    +..  .  .+.++.+|++|.+ ...+.+..|+++|++
T Consensus         2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~--~--~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   73 (286)
T 2zcu_A            2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAA--Q--GITVRQADYGDEAALTSALQGVEKLLLIS   73 (286)
T ss_dssp             EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHH--T--TCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhc--C--CCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            899999999999999999998  9999999998765433    222  1  3678899999976 444455578899887


Q ss_pred             cC
Q 031009          160 VP  161 (167)
Q Consensus       160 i~  161 (167)
                      -.
T Consensus        74 ~~   75 (286)
T 2zcu_A           74 SS   75 (286)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.64  E-value=2.2e-08  Score=79.15  Aligned_cols=72  Identities=15%  Similarity=0.074  Sum_probs=55.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWL  154 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~di  154 (167)
                      +|+++||||+|+||.+++++|+++  |++|++++|+....+     +..     .+.++.+|++|.+ ...+.+  ..|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~   71 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN-----SGPFEVVNALDFNQIEHLVEVHKITD   71 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH-----SSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC-----CCceEEecCCCHHHHHHHHhhcCCCE
Confidence            467999999999999999999999  899999999865421     111     3567899999976 333333  4789


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||+|-.
T Consensus        72 vih~a~~   78 (312)
T 2yy7_A           72 IYLMAAL   78 (312)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.64  E-value=9.9e-08  Score=74.62  Aligned_cols=69  Identities=13%  Similarity=0.006  Sum_probs=55.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEecc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYV  160 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~ai  160 (167)
                      ++++|||+ |+||.+++++|+++|++|++++|+.+..+...    .  .  .+.++.+|++|.+    ....|++||+|-
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--~--~~~~~~~D~~d~~----~~~~d~vi~~a~   72 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A--S--GAEPLLWPGEEPS----LDGVTHLLISTA   72 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H--T--TEEEEESSSSCCC----CTTCCEEEECCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h--C--CCeEEEecccccc----cCCCCEEEECCC
Confidence            68999998 99999999999999999999999987654322    1  1  4888999999844    445789999886


Q ss_pred             Cc
Q 031009          161 PS  162 (167)
Q Consensus       161 ~~  162 (167)
                      +.
T Consensus        73 ~~   74 (286)
T 3ius_A           73 PD   74 (286)
T ss_dssp             CB
T ss_pred             cc
Confidence            54

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.63  E-value=1.8e-08  Score=81.27  Aligned_cols=73  Identities=15%  Similarity=0.004  Sum_probs=56.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCC-----CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAG-----DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--  151 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G-----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--  151 (167)
                      +|+++||||+|+||.+++++|+++|     ++|++++|+.....     +    ...++.++.+|++|.+ ...+.+.  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~----~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H----EDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C----CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c----ccCceEEEEeecCCHHHHHHHHhcCC
Confidence            4689999999999999999999999     99999999865432     1    1125788899999976 3333343  


Q ss_pred             -ceEEEEeccC
Q 031009          152 -SWLLVNIYVP  161 (167)
Q Consensus       152 -~dilvN~ai~  161 (167)
                       .|++||+|-.
T Consensus        72 ~~d~vih~a~~   82 (364)
T 2v6g_A           72 DVTHVFYVTWA   82 (364)
T ss_dssp             TCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence             7899998753

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.62  E-value=2.1e-08  Score=80.92  Aligned_cols=76  Identities=17%  Similarity=0.277  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChh--HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAE--RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLL  155 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dil  155 (167)
                      +++||||+|+||++++++|+++ |++|++++|+..  ..+.+ .++..  + .++.++.+|++|.+ ...+.+  ..|++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~--~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE--S-NRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT--C-TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc--C-CCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            5999999999999999999998 799999998641  12111 11211  2 25888999999976 333333  57899


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||+|-.
T Consensus        78 ih~A~~   83 (361)
T 1kew_A           78 MHLAAE   83 (361)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            998854

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.61  E-value=1.8e-08  Score=79.93  Aligned_cols=72  Identities=17%  Similarity=0.151  Sum_probs=52.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN~  158 (167)
                      +++||||+|+||++++++|+++|++|++++|......   ..+    .. .+.++.+|++|.+ ...+.+  ..|+++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~----~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   73 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENV----PK-GVPFFRVDLRDKEGVERAFREFRPTHVSHQ   73 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGS----CT-TCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhc----cc-CeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            6999999999999999999999999999998542211   111    11 3667899999976 333333  47888887


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |-.
T Consensus        74 a~~   76 (311)
T 2p5y_A           74 AAQ   76 (311)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            753

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.60  E-value=4.8e-08  Score=78.13  Aligned_cols=77  Identities=14%  Similarity=0.172  Sum_probs=55.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC---C---CeEEEEeCChhHH-HHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccce
Q 031009           82 NVLITGSTKGIGYALAKEFLKA---G---DNVIICSRSAERV-DSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSW  153 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~---G---~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~d  153 (167)
                      +++||||+|+||++++++|+++   |   ++|++++|..... .+...++.   ...++.++.+|++|.+ ...+....|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d   78 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---ADPRLRFVHGDIRDAGLLARELRGVD   78 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---TCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---cCCCeEEEEcCCCCHHHHHHHhcCCC
Confidence            6999999999999999999997   8   9999999864210 00111111   1125888999999976 344445688


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||+|-.
T Consensus        79 ~Vih~A~~   86 (337)
T 1r6d_A           79 AIVHFAAE   86 (337)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCc
Confidence            99998854

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.59  E-value=2.6e-08  Score=79.01  Aligned_cols=72  Identities=14%  Similarity=0.113  Sum_probs=51.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEecc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYV  160 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~ai  160 (167)
                      |+++||||+|+||++++++|+++|+.|++..++....+.    +    . ..+.++.+|++|.....+.+..|+++|+|.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~----~----~-~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~   72 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF----V----N-EAARLVKADLAADDIKDYLKGAEEVWHIAA   72 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG----S----C-TTEEEECCCTTTSCCHHHHTTCSEEEECCC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh----c----C-CCcEEEECcCChHHHHHHhcCCCEEEECCC
Confidence            579999999999999999999999555554444332211    0    1 258889999998444555556888999886


Q ss_pred             C
Q 031009          161 P  161 (167)
Q Consensus       161 ~  161 (167)
                      .
T Consensus        73 ~   73 (313)
T 3ehe_A           73 N   73 (313)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.57  E-value=6.2e-08  Score=82.35  Aligned_cols=82  Identities=13%  Similarity=0.079  Sum_probs=60.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH---HHHHHHHHHH--------HhCCceEEEEeccCCChhhhh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER---VDSAVQSLRE--------EFGEQHVWVPPSRLVSAPYNI  147 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~---~~~~~~~l~~--------~~~~~~~~~~~~Dv~d~~~~~  147 (167)
                      ..|+|+||||+|+||.+++++|.+.|++|++++|+...   .+++.+.+..        .... ++.++.+|+++.+...
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLS-NIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHST-TEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccC-ceEEEecCCcccccCC
Confidence            45789999999999999999999999999999998763   2233333221        2223 6999999999955222


Q ss_pred             hhccceEEEEeccC
Q 031009          148 IYKYSWLLVNIYVP  161 (167)
Q Consensus       148 ~~~~~dilvN~ai~  161 (167)
                      .....|++||+|..
T Consensus       228 ~~~~~D~Vih~Aa~  241 (508)
T 4f6l_B          228 LPENMDTIIHAGAR  241 (508)
T ss_dssp             CSSCCSEEEECCCC
T ss_pred             CccCCCEEEECCce
Confidence            44558999998854

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.56  E-value=5.4e-08  Score=85.42  Aligned_cols=78  Identities=14%  Similarity=0.106  Sum_probs=58.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhccce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYKYSW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~~~d  153 (167)
                      ++++|+++||||+|+||.+++++|+++ |++|++++|+.+..++..       ...++.++.+|++|.+  ...+.+..|
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~~~~~~~~~~~D  384 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVKKCD  384 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcHHHHHHhhcCCC
Confidence            467889999999999999999999998 899999999876532211       1125888999999864  233444578


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      +++|+|..
T Consensus       385 ~Vih~Aa~  392 (660)
T 1z7e_A          385 VVLPLVAI  392 (660)
T ss_dssp             EEEECCCC
T ss_pred             EEEECcee
Confidence            89988743

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.55  E-value=6.1e-08  Score=76.05  Aligned_cols=61  Identities=16%  Similarity=0.209  Sum_probs=45.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~di  154 (167)
                      -+.|+++||||+|+||++++++|+++|++|++++|+                       .+|++|.+ ...+.+  ..|+
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~   66 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNV   66 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCE
Confidence            345689999999999999999999999999999986                       25777765 222222  3677


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||+|-.
T Consensus        67 vih~A~~   73 (292)
T 1vl0_A           67 VINCAAH   73 (292)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            7777643

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.55  E-value=3.1e-07  Score=76.49  Aligned_cols=79  Identities=18%  Similarity=0.251  Sum_probs=62.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC---CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ceE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SWL  154 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~di  154 (167)
                      ++++|+|+ ||+|+++++.|+++|   ..|++++|+.+++++..+++....+. ++..+.+|++|.+ ...+.+.  .|+
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~-~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYG-EIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCC-ceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            57999999 899999999999998   38999999999998888877654322 5788899999866 3333333  799


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +||++-+
T Consensus        80 Vin~ag~   86 (405)
T 4ina_A           80 VLNIALP   86 (405)
T ss_dssp             EEECSCG
T ss_pred             EEECCCc
Confidence            9998754

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.52  E-value=1e-07  Score=75.84  Aligned_cols=78  Identities=19%  Similarity=0.308  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .+++|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++....+. .. .+.+|+.+.  .......|++|
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~-~~-~~~~d~~~~--~~~~~~~DilV  198 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK-KF-GEEVKFSGL--DVDLDGVDIII  198 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC-CH-HHHEEEECT--TCCCTTCCEEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc-cc-ceeEEEeeH--HHhhCCCCEEE
Confidence            5789999999997 99999999999999 9999999998888877777543211 00 112333332  11223478888


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      |++-
T Consensus       199 n~ag  202 (287)
T 1nvt_A          199 NATP  202 (287)
T ss_dssp             ECSC
T ss_pred             ECCC
Confidence            8863

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.50  E-value=7.2e-08  Score=77.89  Aligned_cols=78  Identities=12%  Similarity=0.092  Sum_probs=51.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~---  150 (167)
                      ..+++|+++||||+|+||++++++|+++| ++|++++|+.....  ...+    ..  +. +.+|++|.+ ...+.+   
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~--~~-~~~d~~~~~~~~~~~~~~~  112 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VD--LN-IADYMDKEDFLIQIMAGEE  112 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TT--SC-CSEEEEHHHHHHHHHTTCC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cC--ce-EeeecCcHHHHHHHHhhcc
Confidence            34678899999999999999999999999 99999999765321  0111    11  12 677888765 333333   


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        ..|++||+|...
T Consensus       113 ~~~~d~Vih~A~~~  126 (357)
T 2x6t_A          113 FGDVEAIFHEGACS  126 (357)
T ss_dssp             CSSCCEEEECCSCC
T ss_pred             cCCCCEEEECCccc
Confidence              378999988643

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.49  E-value=4.1e-09  Score=83.45  Aligned_cols=39  Identities=26%  Similarity=0.311  Sum_probs=34.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            356789999999999999999999999999999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.49  E-value=1.4e-07  Score=74.83  Aligned_cols=61  Identities=13%  Similarity=0.152  Sum_probs=46.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLL  155 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dil  155 (167)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.                      .+|++|.+ ...+.+  ..|++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~v   59 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQV   59 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCEE
Confidence            357899999999999999999999999999988752                      25777765 233333  46777


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      ||+|..
T Consensus        60 ih~a~~   65 (321)
T 1e6u_A           60 YLAAAK   65 (321)
T ss_dssp             EECCCC
T ss_pred             EEcCee
Confidence            777643

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.47  E-value=7.1e-08  Score=76.43  Aligned_cols=66  Identities=15%  Similarity=0.103  Sum_probs=51.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEE
Q 031009           83 VLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVN  157 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN  157 (167)
                      ++||||+|+||++++++|+++  |++|++++|+.+..+             .+.++.+|++|.+ ...+.+  ..|++||
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            899999999999999999998  799999998754321             2457889999976 333333  4789999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      +|-.
T Consensus        69 ~a~~   72 (317)
T 3ajr_A           69 LAGI   72 (317)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            8754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.43  E-value=1.2e-07  Score=74.08  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=30.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      +++||||+|+||++++++|+++|++|++++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK   37 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecc
Confidence            7999999999999999999999999999998

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.43  E-value=2.3e-07  Score=71.80  Aligned_cols=63  Identities=22%  Similarity=0.207  Sum_probs=49.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~dilvN~  158 (167)
                      +++||||+|+||++++++|+ +|++|++++|+.+.     .       . .   +.+|++|.+ ...+.+.  .|++||+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-----~-------~-~---~~~Dl~~~~~~~~~~~~~~~d~vi~~   64 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-----Q-------G-G---YKLDLTDFPRLEDFIIKKRPDVIINA   64 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-----T-------T-C---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-----C-------C-C---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence            59999999999999999999 48999999998642     0       1 2   789999976 3333333  7899998


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |-.
T Consensus        65 a~~   67 (273)
T 2ggs_A           65 AAM   67 (273)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.39  E-value=2.5e-06  Score=69.00  Aligned_cols=80  Identities=13%  Similarity=0.096  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC---hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      ..+++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++....+. .+..  .++.+.+ ......
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~-~~~~--~~~~~~~~l~~~l~  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDC-KAQL--FDIEDHEQLRKEIA  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSC-EEEE--EETTCHHHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCC-ceEE--eccchHHHHHhhhc
Confidence            3688999999998 7999999999999998 89999999   88888888888765443 3333  3444432 222334


Q ss_pred             cceEEEEec
Q 031009          151 YSWLLVNIY  159 (167)
Q Consensus       151 ~~dilvN~a  159 (167)
                      ..|++||..
T Consensus       226 ~aDiIINaT  234 (315)
T 3tnl_A          226 ESVIFTNAT  234 (315)
T ss_dssp             TCSEEEECS
T ss_pred             CCCEEEECc
Confidence            468888864

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.38  E-value=2.2e-07  Score=72.91  Aligned_cols=60  Identities=17%  Similarity=0.200  Sum_probs=47.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~dilvN~  158 (167)
                      +++||||+|+||++++++|+ +|++|++++|+..                   ++.+|++|.+ ...+.+.  .|+++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~~~d~vih~   61 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKLRPDVIVNA   61 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence            69999999999999999999 8999999999751                   2567888876 3333332  7888888


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |-.
T Consensus        62 a~~   64 (299)
T 1n2s_A           62 AAH   64 (299)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.36  E-value=8.1e-07  Score=75.02  Aligned_cols=76  Identities=12%  Similarity=0.083  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVN  157 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN  157 (167)
                      ++|+++|+| +||+|+++++.|++.|++|++++|+.++.++..+++    +  .+..+.+|++|.+ ........|++||
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~--~~~~~~~Dv~d~~~l~~~l~~~DvVIn   74 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q--HSTPISLDVNDDAALDAEVAKHDLVIS   74 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----T--TEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----C--CceEEEeecCCHHHHHHHHcCCcEEEE
Confidence            468899998 799999999999999999999999987655433221    2  2667889999865 3334446889999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      ++-+
T Consensus        75 ~a~~   78 (450)
T 1ff9_A           75 LIPY   78 (450)
T ss_dssp             CCC-
T ss_pred             CCcc
Confidence            8743

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.36  E-value=1.1e-06  Score=67.90  Aligned_cols=72  Identities=18%  Similarity=0.254  Sum_probs=50.3

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccC
Q 031009           77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRL  140 (167)
Q Consensus        77 ~l~gk~vlITGa----------------s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv  140 (167)
                      +|.||+++||||                +||||+++|++|+++|++|+++++... ++     .    +. .+  ..+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~----~~-g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T----PP-FV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C----CT-TE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c----CC-CC--eEEcc
Confidence            589999999999                689999999999999999999987642 11     0    11 12  24577


Q ss_pred             CChh--hhhh---hccceEEEEeccC
Q 031009          141 VSAP--YNII---YKYSWLLVNIYVP  161 (167)
Q Consensus       141 ~d~~--~~~~---~~~~dilvN~ai~  161 (167)
                      ++..  ....   ....|++||||--
T Consensus        72 ~~~~~~~~~v~~~~~~~Dili~~Aav   97 (226)
T 1u7z_A           72 MTALEMEAAVNASVQQQNIFIGCAAV   97 (226)
T ss_dssp             CSHHHHHHHHHHHGGGCSEEEECCBC
T ss_pred             CcHHHHHHHHHHhcCCCCEEEECCcc
Confidence            7644  1111   1227888888753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.31  E-value=2.2e-06  Score=63.78  Aligned_cols=73  Identities=19%  Similarity=0.158  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-----ccc
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-----KYS  152 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-----~~~  152 (167)
                      +|++++|||+++|||+++++.+...|++|+++++++++.+..    + ..+. ...   .|..+.+ .+...     ...
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~-~~g~-~~~---~d~~~~~~~~~~~~~~~~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----S-RLGV-EYV---GDSRSVDFADEILELTDGYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----H-TTCC-SEE---EETTCSTHHHHHHHHTTTCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----H-HcCC-CEE---eeCCcHHHHHHHHHHhCCCCC
Confidence            578999999999999999999999999999999987765432    1 1233 221   3555443 11111     137


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |+++|++-
T Consensus       109 D~vi~~~g  116 (198)
T 1pqw_A          109 DVVLNSLA  116 (198)
T ss_dssp             EEEEECCC
T ss_pred             eEEEECCc
Confidence            88998864

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.30  E-value=4.9e-06  Score=66.25  Aligned_cols=78  Identities=15%  Similarity=0.159  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      .+++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++....+...+..  .+..+.  .......|++
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~--~~~~~l--~~~l~~~DiV  198 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVG--VDARGI--EDVIAAADGV  198 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEE--ECSTTH--HHHHHHSSEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEE--cCHHHH--HHHHhcCCEE
Confidence            578999999998 8999999999999998 699999999999988888876543323332  232222  1223346788


Q ss_pred             EEec
Q 031009          156 VNIY  159 (167)
Q Consensus       156 vN~a  159 (167)
                      ||..
T Consensus       199 InaT  202 (283)
T 3jyo_A          199 VNAT  202 (283)
T ss_dssp             EECS
T ss_pred             EECC
Confidence            8764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.28  E-value=1.6e-06  Score=68.36  Aligned_cols=74  Identities=16%  Similarity=0.222  Sum_probs=53.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .+++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++... +  .+.  ..|+.  +...  ...|++|
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-~--~~~--~~~~~--~~~~--~~~DivV  185 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-G--SIQ--ALSMD--ELEG--HEFDLII  185 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-S--SEE--ECCSG--GGTT--CCCSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-C--Cee--EecHH--Hhcc--CCCCEEE
Confidence            578999999998 79999999999999999999999998887766655321 1  121  12321  1111  4578888


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      |++-
T Consensus       186 n~t~  189 (271)
T 1nyt_A          186 NATS  189 (271)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8763

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.27  E-value=8e-07  Score=75.86  Aligned_cols=66  Identities=23%  Similarity=0.220  Sum_probs=50.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEec
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIY  159 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~a  159 (167)
                      +++|+||||+|+||.+++++|+++|++|++++|+....            .    .+.+|+.+.. .......|++||+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~------------~----~v~~d~~~~~-~~~l~~~D~Vih~A  209 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP------------G----KRFWDPLNPA-SDLLDGADVLVHLA  209 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT------------T----CEECCTTSCC-TTTTTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc------------c----ceeecccchh-HHhcCCCCEEEECC
Confidence            67899999999999999999999999999999987532            1    1456776543 22334578889987


Q ss_pred             cCc
Q 031009          160 VPS  162 (167)
Q Consensus       160 i~~  162 (167)
                      -..
T Consensus       210 ~~~  212 (516)
T 3oh8_A          210 GEP  212 (516)
T ss_dssp             CC-
T ss_pred             CCc
Confidence            543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.25  E-value=2.7e-07  Score=72.35  Aligned_cols=66  Identities=12%  Similarity=0.150  Sum_probs=46.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhcc--ce
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKY--SW  153 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~--~d  153 (167)
                      .+++|+++||||+|+||++++++|+++|+      +..             .....+.++.+|++|.+ ...+.+.  .|
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-------------~~~~~~~~~~~D~~d~~~~~~~~~~~~~d   63 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-------------EDWVFVSSKDADLTDTAQTRALFEKVQPT   63 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-------------CEEEECCTTTCCTTSHHHHHHHHHHSCCS
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-------------ccccccCceecccCCHHHHHHHHhhcCCC
Confidence            46788999999999999999999999997      100             00012334578998876 3333333  78


Q ss_pred             EEEEeccC
Q 031009          154 LLVNIYVP  161 (167)
Q Consensus       154 ilvN~ai~  161 (167)
                      ++||+|..
T Consensus        64 ~Vih~A~~   71 (319)
T 4b8w_A           64 HVIHLAAM   71 (319)
T ss_dssp             EEEECCCC
T ss_pred             EEEECcee
Confidence            88888765

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.22  E-value=5.6e-07  Score=70.76  Aligned_cols=72  Identities=13%  Similarity=0.114  Sum_probs=51.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----cceE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----YSWL  154 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----~~di  154 (167)
                      +++||||+|+||++++++|+++| ++|++++|......  ...+.   +. .   +.+|++|.+ ...+.+     ..|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~~-~---~~~d~~~~~~~~~~~~~~~~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---DL-N---IADYMDKEDFLIQIMAGEEFGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---TS-C---CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---cc-e---eccccccHHHHHHHHhccccCCCcE
Confidence            38999999999999999999999 99999999765421  11121   11 2   677888765 333333     3789


Q ss_pred             EEEeccCc
Q 031009          155 LVNIYVPS  162 (167)
Q Consensus       155 lvN~ai~~  162 (167)
                      +||+|-..
T Consensus        72 vi~~a~~~   79 (310)
T 1eq2_A           72 IFHEGACS   79 (310)
T ss_dssp             EEECCSCC
T ss_pred             EEECcccc
Confidence            99988543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.19  E-value=5.3e-06  Score=58.42  Aligned_cols=58  Identities=21%  Similarity=0.325  Sum_probs=45.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +++++++|+|+ |.+|+.+++.|.++|++|++++++++..++..    ..    .+.++.+|.++.+
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~~----~~~~~~gd~~~~~   61 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----DE----GFDAVIADPTDES   61 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEECCTTCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----HC----CCcEEECCCCCHH
Confidence            34567999998 77999999999999999999999987665432    22    2466788999876

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.17  E-value=3.2e-06  Score=67.94  Aligned_cols=74  Identities=11%  Similarity=0.045  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCC-hh-hhhhh----cc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS-AP-YNIIY----KY  151 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d-~~-~~~~~----~~  151 (167)
                      -+|++++|||+++|||+++++.+...|++|+++++++++.+.+ +++    +. ..   .+|.++ .+ .+.+.    ..
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~----g~-~~---~~d~~~~~~~~~~~~~~~~~~  214 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI----GF-DA---AFNYKTVNSLEEALKKASPDG  214 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT----TC-SE---EEETTSCSCHHHHHHHHCTTC
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc----CC-cE---EEecCCHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999988766544 332    33 22   236655 22 11111    23


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|+++|++-
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            788888763

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.16  E-value=7.2e-06  Score=63.55  Aligned_cols=36  Identities=22%  Similarity=0.395  Sum_probs=32.9

Q ss_pred             CCCEEEEeCC----------------CCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           79 PPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        79 ~gk~vlITGa----------------s~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .||+++||||                +|++|+++|++|+++|++|+++++..
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~   53 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR   53 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            5899999999                78899999999999999999999864

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.15  E-value=3e-06  Score=59.19  Aligned_cols=74  Identities=11%  Similarity=0.108  Sum_probs=49.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hccceE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YKYSWL  154 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~~~di  154 (167)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++++++..++.    ... +   ..++..|.++.+. ... ....|+
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~-~---~~~~~~d~~~~~~l~~~~~~~~d~   73 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY-A---THAVIANATEENELLSLGIRNFEY   73 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT-C---SEEEECCTTCHHHHHTTTGGGCSE
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh-C---CEEEEeCCCCHHHHHhcCCCCCCE
Confidence            456778999998 9999999999999999999999987654322    111 2   2456778887552 221 233566


Q ss_pred             EEEec
Q 031009          155 LVNIY  159 (167)
Q Consensus       155 lvN~a  159 (167)
                      ++++.
T Consensus        74 vi~~~   78 (144)
T 2hmt_A           74 VIVAI   78 (144)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            66544

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.15  E-value=2.6e-06  Score=73.18  Aligned_cols=73  Identities=25%  Similarity=0.285  Sum_probs=46.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .+++|+++|||+ ||+|++++..|++.|++|++++|+.++++++.+++    +. ++..+. |+.+    ......|++|
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~----~~-~~~~~~-dl~~----~~~~~~DilV  429 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI----GG-KALSLT-DLDN----YHPEDGMVLA  429 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT----TC--CEETT-TTTT----C--CCSEEEE
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-ceeeHH-Hhhh----ccccCceEEE
Confidence            467899999999 59999999999999999999999988877665554    22 222111 2211    0112368999


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      |++-
T Consensus       430 N~ag  433 (523)
T 2o7s_A          430 NTTS  433 (523)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9874

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.12  E-value=4.6e-06  Score=70.80  Aligned_cols=79  Identities=11%  Similarity=0.069  Sum_probs=56.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccc
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYS  152 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~  152 (167)
                      ...+++|+++|+|+ ||+|+++++.|++. |++|++++|+.++++++.++    .   .+..+.+|+.|.+ ........
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~---~~~~~~~D~~d~~~l~~~l~~~   89 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S---GSKAISLDVTDDSALDKVLADN   89 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G---TCEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c---CCcEEEEecCCHHHHHHHHcCC
Confidence            34677889999997 99999999999998 68899999998876654332    1   2455678998865 33334458


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |++||++-.
T Consensus        90 DvVIn~tp~   98 (467)
T 2axq_A           90 DVVISLIPY   98 (467)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCch
Confidence            999998643

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.12  E-value=2.1e-05  Score=63.47  Aligned_cols=80  Identities=15%  Similarity=0.122  Sum_probs=57.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC---hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS---AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      ..+++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++....+. .+..+  +..+.+ ......
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~-~v~~~--~~~~l~~~~~~l~  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDC-VVTVT--DLADQHAFTEALA  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSC-EEEEE--ETTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCc-ceEEe--chHhhhhhHhhcc
Confidence            3578999999998 8999999999999997 79999999   77888888887665443 33333  443421 122233


Q ss_pred             cceEEEEec
Q 031009          151 YSWLLVNIY  159 (167)
Q Consensus       151 ~~dilvN~a  159 (167)
                      ..|++||.-
T Consensus       220 ~~DiIINaT  228 (312)
T 3t4e_A          220 SADILTNGT  228 (312)
T ss_dssp             HCSEEEECS
T ss_pred             CceEEEECC
Confidence            467888853

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.02  E-value=2.2e-05  Score=63.10  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-----cc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-----KY  151 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-----~~  151 (167)
                      -+|++++|||++||||+++++.+...|++|+++++++++.+.+ .+    .+. +..   .|..+.+ .+.+.     ..
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~----~g~-~~~---~d~~~~~~~~~i~~~~~~~~  214 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA-RK----LGC-HHT---INYSTQDFAEVVREITGGKG  214 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH----HTC-SEE---EETTTSCHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH----cCC-CEE---EECCCHHHHHHHHHHhCCCC
Confidence            4688999999999999999999999999999999998766543 22    243 222   2554433 11111     23


Q ss_pred             ceEEEEeccC
Q 031009          152 SWLLVNIYVP  161 (167)
Q Consensus       152 ~dilvN~ai~  161 (167)
                      .|+++|++-.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            7888888743

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.01  E-value=1.7e-05  Score=63.43  Aligned_cols=74  Identities=15%  Similarity=0.123  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-----cc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-----KY  151 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-----~~  151 (167)
                      -+|++++|||+++|||+++++.+...|++|+++++++++.+... +    .+. +..   .|..+.+ .+...     ..
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~----~g~-~~~---~~~~~~~~~~~~~~~~~~~~  209 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-K----AGA-WQV---INYREEDLVERLKEITGGKK  209 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-H----HTC-SEE---EETTTSCHHHHHHHHTTTCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H----cCC-CEE---EECCCccHHHHHHHHhCCCC
Confidence            36899999999999999999999999999999999887665432 2    243 222   3554433 11111     13


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|+++|++-
T Consensus       210 ~D~vi~~~g  218 (327)
T 1qor_A          210 VRVVYDSVG  218 (327)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCc
Confidence            788888874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.98  E-value=1.6e-05  Score=64.59  Aligned_cols=43  Identities=23%  Similarity=0.239  Sum_probs=38.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++||||+||||+.+++.+...|++|+++++++++++.+
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  203 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA  203 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4688999999999999999999999999999999998776544

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.96  E-value=7.4e-06  Score=64.44  Aligned_cols=34  Identities=35%  Similarity=0.445  Sum_probs=32.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +|+||||+|.||+.++++|.++|++|+++.|++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~   35 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG   35 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            5999999999999999999999999999999764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.94  E-value=1.2e-05  Score=65.16  Aligned_cols=74  Identities=8%  Similarity=-0.025  Sum_probs=51.3

Q ss_pred             CC--CEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc----
Q 031009           79 PP--YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK----  150 (167)
Q Consensus        79 ~g--k~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~----  150 (167)
                      +|  ++++|||++||||+.+++.+...|+ +|+++++++++.+.+.++    .+. +.   .+|..+.+ .+...+    
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~----~g~-~~---~~d~~~~~~~~~~~~~~~~  229 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE----LGF-DA---AINYKKDNVAEQLRESCPA  229 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----SCC-SE---EEETTTSCHHHHHHHHCTT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH----cCC-ce---EEecCchHHHHHHHHhcCC
Confidence            57  8999999999999999999999999 999999988766544322    243 22   23554433 111111    


Q ss_pred             cceEEEEecc
Q 031009          151 YSWLLVNIYV  160 (167)
Q Consensus       151 ~~dilvN~ai  160 (167)
                      ..|+++|++-
T Consensus       230 ~~d~vi~~~G  239 (357)
T 2zb4_A          230 GVDVYFDNVG  239 (357)
T ss_dssp             CEEEEEESCC
T ss_pred             CCCEEEECCC
Confidence            3788888763

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.93  E-value=2.2e-05  Score=61.20  Aligned_cols=82  Identities=22%  Similarity=0.196  Sum_probs=60.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+.+.+.+....+..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            467889999997 8999999999999995 899999987                   6777777777765554466677


Q ss_pred             eccCCChhhhhhhccceEEEEec
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNIY  159 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~a  159 (167)
                      ..++++..........|++|++.
T Consensus       107 ~~~~~~~~~~~~~~~~DvVi~~~  129 (249)
T 1jw9_B          107 NALLDDAELAALIAEHDLVLDCT  129 (249)
T ss_dssp             CSCCCHHHHHHHHHTSSEEEECC
T ss_pred             eccCCHhHHHHHHhCCCEEEEeC
Confidence            76676433333334467777653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.92  E-value=4.4e-05  Score=61.99  Aligned_cols=41  Identities=20%  Similarity=0.248  Sum_probs=37.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -+|++++|+|++||+|+++++.+...|++|+++++++++.+
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~  209 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK  209 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Confidence            36889999999999999999999999999999999987665

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.91  E-value=2.2e-05  Score=64.41  Aligned_cols=74  Identities=22%  Similarity=0.222  Sum_probs=51.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dil  155 (167)
                      .+++++++|+|+ |+||+.+++.+...|++|+++++++++++...+.    .+. .   +.+|..+.+ ........|++
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~----~g~-~---~~~~~~~~~~l~~~~~~~DvV  233 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV----FGG-R---VITLTATEANIKKSVQHADLL  233 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TTT-S---EEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCc-e---EEEecCCHHHHHHHHhCCCEE
Confidence            578899999999 9999999999999999999999998776544322    233 2   233444433 22223345666


Q ss_pred             EEec
Q 031009          156 VNIY  159 (167)
Q Consensus       156 vN~a  159 (167)
                      +|++
T Consensus       234 i~~~  237 (369)
T 2eez_A          234 IGAV  237 (369)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            6655

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.91  E-value=3.5e-05  Score=61.86  Aligned_cols=43  Identities=19%  Similarity=0.158  Sum_probs=38.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|++||||+.+++.+...|++|+++++++++.+.+
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  190 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL  190 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4689999999999999999999999999999999998776544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=97.90  E-value=1.5e-05  Score=64.60  Aligned_cols=31  Identities=26%  Similarity=0.453  Sum_probs=30.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-eEEEEeC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD-NVIICSR  112 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r  112 (167)
                      +++||||+|+||++++++|+++|+ +|+.++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            699999999999999999999998 9999999

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.85  E-value=6.3e-05  Score=60.51  Aligned_cols=43  Identities=19%  Similarity=0.176  Sum_probs=38.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|++||+|+.+++.+...|++|+++++++++++.+
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~  196 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLL  196 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4689999999999999999999999999999999998766543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.83  E-value=3.1e-05  Score=65.90  Aligned_cols=43  Identities=21%  Similarity=0.251  Sum_probs=38.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      ++.||+++|||++ +||+++++.|...|++|+++++++....+.
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            6899999999996 999999999999999999999998765544

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.79  E-value=4e-05  Score=60.30  Aligned_cols=48  Identities=21%  Similarity=0.418  Sum_probs=42.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~  163 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ  163 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc
Confidence            578899999998 799999999999999999999999988887776653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.76  E-value=0.00014  Score=50.26  Aligned_cols=56  Identities=20%  Similarity=0.358  Sum_probs=42.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +.++|+|+ |.+|..+++.|.+.|++|++++++++..++.    ....+   +.++..|.++.+
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~----~~~~~---~~~~~~d~~~~~   60 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA----SAEID---ALVINGDCTKIK   60 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHCS---SEEEESCTTSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----HHhcC---cEEEEcCCCCHH
Confidence            46889987 9999999999999999999999988765433    22212   345667777654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.69  E-value=2.6e-05  Score=62.79  Aligned_cols=76  Identities=14%  Similarity=0.152  Sum_probs=47.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-------eEEEEeCCh--hHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSA--ERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      ++++||||+|+||..++..|+++|+       +|+++|+.+  +..+....++... .   +.+. .|+.+.. .....+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~-~---~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-A---FPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-T---CTTE-EEEEEESCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc-c---cccc-CCeEeccChHHHhC
Confidence            3699999999999999999999986       799999874  2233222333221 1   1111 3554422 222334


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      ..|+++|.|-.
T Consensus        80 ~~D~Vih~Ag~   90 (327)
T 1y7t_A           80 DADYALLVGAA   90 (327)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            56788887643

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.68  E-value=0.00011  Score=58.41  Aligned_cols=49  Identities=14%  Similarity=0.327  Sum_probs=43.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      .+++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++..
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  172 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence            578999999998 7999999999999995 899999999988887777643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.67  E-value=0.00011  Score=58.06  Aligned_cols=48  Identities=25%  Similarity=0.333  Sum_probs=42.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      .+++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++.
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            578999999998 7999999999999995 89999999998887777663

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.63  E-value=0.00025  Score=50.50  Aligned_cols=59  Identities=15%  Similarity=0.233  Sum_probs=44.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh-hHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .+.++|.|+ |.+|+.+++.|.+.|++|++++++. +..+...+.    ... .+.++.+|.++.+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~----~~~-~~~~i~gd~~~~~   62 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR----LGD-NADVIPGDSNDSS   62 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH----HCT-TCEEEESCTTSHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh----hcC-CCeEEEcCCCCHH
Confidence            456888886 9999999999999999999999974 444333222    122 3677889998876

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.62  E-value=9.2e-05  Score=60.03  Aligned_cols=43  Identities=26%  Similarity=0.301  Sum_probs=38.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+||+||+|+..++.+...|++|+++++++++.+.+
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  208 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC  208 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4688999999999999999999999999999999998876543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.61  E-value=0.00022  Score=57.19  Aligned_cols=41  Identities=20%  Similarity=0.310  Sum_probs=37.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -+|++++|+||+||+|+..++.+...|++|+++++++++++
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  187 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK  187 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            46889999999999999999999999999999999887665

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.61  E-value=0.00022  Score=57.04  Aligned_cols=43  Identities=21%  Similarity=0.223  Sum_probs=38.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|++|++|+..++.+...|++|+++++++++.+.+
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  181 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA  181 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3688999999999999999999999999999999988776543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.58  E-value=0.00026  Score=55.09  Aligned_cols=81  Identities=17%  Similarity=0.188  Sum_probs=57.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+.+++|+|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+....+..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            467789999998 889999999999999 4788887542                   4566677777766555466666


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ..++++.....+.+..|++|++
T Consensus       104 ~~~~~~~~~~~~~~~~DvVi~~  125 (251)
T 1zud_1          104 QQRLTGEALKDAVARADVVLDC  125 (251)
T ss_dssp             CSCCCHHHHHHHHHHCSEEEEC
T ss_pred             eccCCHHHHHHHHhcCCEEEEC
Confidence            6666544333334446777764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.58  E-value=0.0002  Score=57.77  Aligned_cols=42  Identities=24%  Similarity=0.253  Sum_probs=37.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -.|++++|+|++||+|...++.+...|++|+++++++++.+.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  199 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF  199 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            468899999999999999999999999999999998887643

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.57  E-value=0.00014  Score=58.74  Aligned_cols=41  Identities=17%  Similarity=0.189  Sum_probs=37.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -+|++++|+|++||||+++++.+...|++|+++++++++.+
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~  208 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE  208 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH
Confidence            46899999999999999999999999999999999887664

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.56  E-value=0.00023  Score=57.26  Aligned_cols=43  Identities=14%  Similarity=0.120  Sum_probs=38.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|+++|+|+..++.+...|++|+++++++++.+.+
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  185 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL  185 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4688999999999999999999888999999999988876543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.45  E-value=0.00038  Score=56.86  Aligned_cols=44  Identities=27%  Similarity=0.277  Sum_probs=39.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~  121 (167)
                      .+++++++|+|+ ||+|+++++.+...|++|++++|++++++.+.
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~  207 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE  207 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            366789999999 99999999999999999999999988776553

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.43  E-value=0.00023  Score=56.75  Aligned_cols=47  Identities=17%  Similarity=0.281  Sum_probs=40.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .+++|+++|.|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999999998 7999999999999997 8999999998877665543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.41  E-value=0.00025  Score=57.14  Aligned_cols=43  Identities=23%  Similarity=0.336  Sum_probs=37.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|||+++|+|+.+++.+... |++|+++++++++.+.+
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~  212 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA  212 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            46889999999999999999999998 99999999988776543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.40  E-value=0.00012  Score=52.92  Aligned_cols=69  Identities=13%  Similarity=0.040  Sum_probs=47.0

Q ss_pred             CchHHHHHHHHHHCCCeEEEEeCChhHHH---HHHHHHHHHhCCceEEEEeccCCCh--h-hhhhhc------cceEEEE
Q 031009           90 KGIGYALAKEFLKAGDNVIICSRSAERVD---SAVQSLREEFGEQHVWVPPSRLVSA--P-YNIIYK------YSWLLVN  157 (167)
Q Consensus        90 ~GIG~aia~~L~~~G~~Vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dv~d~--~-~~~~~~------~~dilvN  157 (167)
                      +-++.++++.|+++|++|++..|+++...   +..+++++. |. ++..+++|+++.  + ...+.+      ..|+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~-G~-~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA-GM-DYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT-TC-EEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc-CC-eEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence            34789999999999999999988755432   123344333 44 688899999988  4 222111      1389999


Q ss_pred             ecc
Q 031009          158 IYV  160 (167)
Q Consensus       158 ~ai  160 (167)
                      |+-
T Consensus       104 nAg  106 (157)
T 3gxh_A          104 CLA  106 (157)
T ss_dssp             CSB
T ss_pred             CCC
Confidence            974

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.40  E-value=0.00079  Score=53.72  Aligned_cols=67  Identities=18%  Similarity=0.301  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      ..++.++|+|.|+ ||+|.++++.|+..| .++.++|.+.                  .+.+.+.+.+....+..++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            3578889999988 999999999999999 6799998765                  5666777777776666678888


Q ss_pred             eccCCCh
Q 031009          137 PSRLVSA  143 (167)
Q Consensus       137 ~~Dv~d~  143 (167)
                      ..++++.
T Consensus       111 ~~~l~~~  117 (292)
T 3h8v_A          111 NYNITTV  117 (292)
T ss_dssp             CCCTTSH
T ss_pred             cccCCcH
Confidence            8888763

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.39  E-value=0.0013  Score=46.20  Aligned_cols=57  Identities=19%  Similarity=0.257  Sum_probs=44.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +++ .++|.|+ |.+|..+++.|.+.|++|++++++++..++..    ..    .+.++.+|.++.+
T Consensus         6 ~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~----g~~~i~gd~~~~~   62 (140)
T 3fwz_A            6 ICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ER----GVRAVLGNAANEE   62 (140)
T ss_dssp             CCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEESCTTSHH
T ss_pred             CCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----Hc----CCCEEECCCCCHH
Confidence            444 4788887 88999999999999999999999988765432    21    2566888998876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.38  E-value=0.00033  Score=56.51  Aligned_cols=42  Identities=19%  Similarity=0.214  Sum_probs=37.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +|++++|+||+|++|...++.+...|++|+++++++++.+.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT  191 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            689999999999999999999999999999999988765543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.38  E-value=0.00035  Score=56.20  Aligned_cols=74  Identities=18%  Similarity=0.129  Sum_probs=51.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh---h--cc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII---Y--KY  151 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~---~--~~  151 (167)
                      -+|++++|+|++||+|+.+++.+...|++|+++++++++.+.+. +    .+. +..   .|..+.+ .+..   .  ..
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~----~ga-~~~---~d~~~~~~~~~~~~~~~~~~  235 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-A----LGA-DET---VNYTHPDWPKEVRRLTGGKG  235 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----HTC-SEE---EETTSTTHHHHHHHHTTTTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h----cCC-CEE---EcCCcccHHHHHHHHhCCCC
Confidence            36889999999999999999999999999999999987765442 2    243 221   3555433 1111   1  23


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .|+++|++-
T Consensus       236 ~d~vi~~~g  244 (343)
T 2eih_A          236 ADKVVDHTG  244 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            788888765

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.28  E-value=0.00065  Score=51.16  Aligned_cols=55  Identities=18%  Similarity=0.267  Sum_probs=44.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +++|.|+ |.+|..+++.|.++|++|++++++++..++..+    ..   .+.++.+|.++.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~----~~---~~~~i~gd~~~~~   56 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK----KL---KATIIHGDGSHKE   56 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----HS---SSEEEESCTTSHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----Hc---CCeEEEcCCCCHH
Confidence            4899997 899999999999999999999999887654332    21   2467888998876

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.25  E-value=0.00054  Score=55.68  Aligned_cols=42  Identities=26%  Similarity=0.145  Sum_probs=37.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+||+|++|+..++.+...|++|+++++++++.+.
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~  203 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF  203 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            468899999999999999999999999999999998776544

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.24  E-value=0.00088  Score=48.90  Aligned_cols=59  Identities=22%  Similarity=0.140  Sum_probs=44.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .+.++.++|.|+ |.+|..+++.|.+. |++|++++++++..++.    ... +   +.++.+|.++.+
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~-g---~~~~~gd~~~~~   95 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSE-G---RNVISGDATDPD   95 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHT-T---CCEEECCTTCHH
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHC-C---CCEEEcCCCCHH
Confidence            355667888885 99999999999999 99999999998766443    222 2   345567887765

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.21  E-value=0.0005  Score=54.27  Aligned_cols=43  Identities=19%  Similarity=0.254  Sum_probs=37.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|++||+|+..++.+...|++|+++++++++.+..
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3688999999999999999999999999999999988776543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.20  E-value=0.00085  Score=50.03  Aligned_cols=42  Identities=24%  Similarity=0.452  Sum_probs=36.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      ++.|+|++|.+|.++++.|++.|++|++++|+++..++..++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999899999999999999999999999998876655443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.08  E-value=0.001  Score=55.46  Aligned_cols=44  Identities=23%  Similarity=0.220  Sum_probs=38.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      .-+|++++|+|++||||+..++.+...|++|+++++++++.+.+
T Consensus       218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            34689999999999999999999999999999999888766543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.08  E-value=0.00059  Score=54.17  Aligned_cols=45  Identities=13%  Similarity=0.198  Sum_probs=39.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQ  122 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~  122 (167)
                      .+++|.++|.|+ ||.|++++..|.+.|+ +|++++|+.++.+++.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            578999999998 7999999999999997 89999999987765543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.06  E-value=0.0012  Score=53.71  Aligned_cols=67  Identities=19%  Similarity=0.135  Sum_probs=50.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEec
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      +|+|-|+ |++|+.+++.|.+ .++|.+.+++.+.+++..       .  .+..+.+|+.|.+ .....+..|++||+.
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~--~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------E--FATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------T--TSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------c--cCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            5888898 9999999998865 578999999987765431       1  2455788999876 344445578898865

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.06  E-value=0.00051  Score=48.41  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=38.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|+.++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999997 99999999999999999999999998877655544

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.05  E-value=0.0031  Score=51.48  Aligned_cols=81  Identities=16%  Similarity=0.150  Sum_probs=60.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++++|+|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+....+..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            467888999988 899999999999999 5799998752                   2566667777776666577888


Q ss_pred             eccCCChh-hhhhhccceEEEEec
Q 031009          137 PSRLVSAP-YNIIYKYSWLLVNIY  159 (167)
Q Consensus       137 ~~Dv~d~~-~~~~~~~~dilvN~a  159 (167)
                      ..++.+.. ... ....|++|++.
T Consensus       194 ~~~i~~~~~~~~-~~~~DlVvd~~  216 (353)
T 3h5n_A          194 ALNINDYTDLHK-VPEADIWVVSA  216 (353)
T ss_dssp             ECCCCSGGGGGG-SCCCSEEEECC
T ss_pred             ecccCchhhhhH-hccCCEEEEec
Confidence            87777654 333 44466777653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.01  E-value=0.0015  Score=53.71  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=38.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      .+.|++++|+|+ |+||+.+++.+...|++|++++++.++++..
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~  207 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL  207 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            578999999998 9999999999999999999999998776543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.99  E-value=0.0011  Score=47.27  Aligned_cols=60  Identities=13%  Similarity=0.168  Sum_probs=43.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ...++.++|.|+ |.+|+.+++.|.+.|++|++++++++..+...    ...   ...++..|..+.+
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~----~~~---g~~~~~~d~~~~~   75 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLN----SEF---SGFTVVGDAAEFE   75 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSC----TTC---CSEEEESCTTSHH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH----hcC---CCcEEEecCCCHH
Confidence            466778999996 99999999999999999999999987654321    011   2334556776654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.99  E-value=0.0013  Score=51.83  Aligned_cols=41  Identities=37%  Similarity=0.349  Sum_probs=37.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~  121 (167)
                      +|+++|.|+ ||.|++++..|++.|.+|++++|+.++.+++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            889999997 99999999999999999999999999887765

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.99  E-value=0.0021  Score=51.06  Aligned_cols=79  Identities=16%  Similarity=0.239  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..++||.++|.|+++-.|+.++..|+..|++|.++++....+++..       ...++.+...-....-.....+..-++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~~-------~~ADIVI~Avg~p~~I~~~~vk~GavV  228 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYT-------RQADLIIVAAGCVNLLRSDMVKEGVIV  228 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHH-------TTCSEEEECSSCTTCBCGGGSCTTEEE
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHHh-------hcCCEEEECCCCCCcCCHHHcCCCeEE
Confidence            3689999999999888999999999999999999998765544322       222555544432221122222335566


Q ss_pred             EEeccC
Q 031009          156 VNIYVP  161 (167)
Q Consensus       156 vN~ai~  161 (167)
                      |+.+++
T Consensus       229 IDVgi~  234 (285)
T 3p2o_A          229 VDVGIN  234 (285)
T ss_dssp             EECCCE
T ss_pred             EEeccC
Confidence            666655

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.99  E-value=0.0036  Score=50.83  Aligned_cols=73  Identities=18%  Similarity=0.173  Sum_probs=49.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVN  157 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN  157 (167)
                      +|++++|+|+ |++|...++.+...|++|+++++++++.+...++    .+...+    .|..+.+ ........|++++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----lGa~~v----~~~~~~~~~~~~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN----FGADSF----LVSRDQEQMQAAAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT----SCCSEE----EETTCHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cCCceE----EeccCHHHHHHhhCCCCEEEE
Confidence            7899999996 9999999999989999999999998776543322    243221    2444432 1112223677777


Q ss_pred             ecc
Q 031009          158 IYV  160 (167)
Q Consensus       158 ~ai  160 (167)
                      +.-
T Consensus       258 ~~g  260 (366)
T 1yqd_A          258 TVS  260 (366)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            653

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.97  E-value=0.0021  Score=52.81  Aligned_cols=46  Identities=22%  Similarity=0.321  Sum_probs=40.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      +++||+++|.|. |.+|..+++.|.+.|++|++.|++.+++++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999999998 8899999999999999999999998877665554

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.95  E-value=0.0011  Score=53.82  Aligned_cols=39  Identities=26%  Similarity=0.293  Sum_probs=35.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh---hHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---ERV  117 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~---~~~  117 (167)
                      ++|++++|+|+ ||+|...++.+...|++|+++++++   ++.
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~  220 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ  220 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH
Confidence            44999999999 9999999999989999999999987   655

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.93  E-value=0.0014  Score=52.82  Aligned_cols=41  Identities=12%  Similarity=0.100  Sum_probs=36.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +++++|+||+|++|+..++.+...|++|+++++++++.+.+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  205 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL  205 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            37999999999999999999988999999999988876544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.93  E-value=0.0025  Score=51.88  Aligned_cols=63  Identities=14%  Similarity=0.255  Sum_probs=49.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++++|+|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+....+..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            467889999998 999999999999999 6788888643                   3566677777776665566666


Q ss_pred             eccC
Q 031009          137 PSRL  140 (167)
Q Consensus       137 ~~Dv  140 (167)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            6555

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.83  E-value=0.011  Score=46.64  Aligned_cols=42  Identities=21%  Similarity=0.360  Sum_probs=37.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      ..+.||+++|.|+ |+||+++++.+...|++|++++|+.++.+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            3689999999996 89999999999999999999999986644

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.82  E-value=0.0025  Score=51.13  Aligned_cols=41  Identities=24%  Similarity=0.251  Sum_probs=36.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ ||+|+..++.+...|++|+++++++++.+.
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  203 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL  203 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            46889999999 889999999999999999999999877654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=96.81  E-value=0.0018  Score=52.18  Aligned_cols=46  Identities=13%  Similarity=0.214  Sum_probs=37.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-------eEEEEeCC----hhHHHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRS----AERVDSAVQSLRE  126 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~-------~Vi~~~r~----~~~~~~~~~~l~~  126 (167)
                      ++++||||+|++|..++..|+.+|.       .|+++|++    +++++....++..
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~   62 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD   62 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh
Confidence            4799999999999999999999885       79999998    5555554555543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.79  E-value=0.0053  Score=48.54  Aligned_cols=77  Identities=13%  Similarity=0.159  Sum_probs=51.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVN  157 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN  157 (167)
                      +.||.++|.|+++-.|+.++..|+..|++|.++++....+++...+       .++.+...-.-..-.....+..-++|+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~-------ADIVI~Avg~p~~I~~~~vk~GavVID  220 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRS-------SKIVVVAVGRPGFLNREMVTPGSVVID  220 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHH-------SSEEEECSSCTTCBCGGGCCTTCEEEE
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhcc-------CCEEEECCCCCccccHhhccCCcEEEE
Confidence            8999999999988899999999999999999999876555433222       145544332211111122233456666


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      .+++
T Consensus       221 vgi~  224 (276)
T 3ngx_A          221 VGIN  224 (276)
T ss_dssp             CCCE
T ss_pred             eccC
Confidence            6665

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.78  E-value=0.0026  Score=52.62  Aligned_cols=46  Identities=26%  Similarity=0.429  Sum_probs=39.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~  123 (167)
                      .+.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++..++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~  210 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD  210 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            478999999998 9999999999999998 899999998776544433

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.75  E-value=0.00061  Score=53.92  Aligned_cols=42  Identities=21%  Similarity=0.364  Sum_probs=37.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      .+++|+++|+|+ ||.|++++..|.+.|+ +|++++|+.++.++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            578999999998 7999999999999998 89999999876543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.73  E-value=0.0029  Score=50.91  Aligned_cols=40  Identities=23%  Similarity=0.307  Sum_probs=34.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -+|++++|+||+|++|+..++.+...|++|+++ +++++.+
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~  188 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE  188 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH
Confidence            368899999999999999999999999999998 6666544

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.73  E-value=0.0052  Score=48.16  Aligned_cols=43  Identities=21%  Similarity=0.195  Sum_probs=36.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      -+++.|.|+ |.+|..++..|++.|++|++++++++.+++..+.
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            456777776 8899999999999999999999999887766554

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.70  E-value=0.0032  Score=52.67  Aligned_cols=43  Identities=30%  Similarity=0.358  Sum_probs=37.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .-.|++++|+|++|++|...++.+...|++|+++++++++++.
T Consensus       226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~  268 (456)
T 3krt_A          226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEI  268 (456)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            3468899999999999999999998999999999988776653

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.68  E-value=0.0048  Score=49.78  Aligned_cols=38  Identities=18%  Similarity=0.074  Sum_probs=33.2

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           79 PP-YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        79 ~g-k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      .| ++++|+|++|++|...++.....|++|++++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            57 899999999999999988877789999998876655

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.67  E-value=0.0068  Score=48.15  Aligned_cols=80  Identities=15%  Similarity=0.175  Sum_probs=53.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      ..++||.++|.|.++-.|+.++..|+..|++|.++.+....+++...       ..++.+...-....-.....+..-++
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~~-------~ADIVI~Avg~p~~I~~~~vk~GavV  229 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVS-------RADLVVVAAGKPGLVKGEWIKEGAIV  229 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHH-------TCSEEEECCCCTTCBCGGGSCTTCEE
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHhc-------cCCEEEECCCCCCCCCHHHcCCCeEE
Confidence            36899999999998889999999999999999999886554443221       12455544332211122222335577


Q ss_pred             EEeccCc
Q 031009          156 VNIYVPS  162 (167)
Q Consensus       156 vN~ai~~  162 (167)
                      |+.+++-
T Consensus       230 IDvgi~~  236 (286)
T 4a5o_A          230 IDVGINR  236 (286)
T ss_dssp             EECCSCS
T ss_pred             EEecccc
Confidence            7777663

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.66  E-value=0.0081  Score=48.31  Aligned_cols=41  Identities=24%  Similarity=0.267  Sum_probs=35.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|+..++.+...|++|+++++++++.+.
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  207 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV  207 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            36889999997 899999999888899999999998876543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.65  E-value=0.0073  Score=48.29  Aligned_cols=41  Identities=15%  Similarity=0.233  Sum_probs=36.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .++||.++|.|.++-.|+.++..|+..|++|.++++....+
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l  202 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTE  202 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence            68999999999988899999999999999999999855444

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.60  E-value=0.0053  Score=53.56  Aligned_cols=63  Identities=14%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++++|+|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+.+..+..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            467889999998 899999999999999 6799988753                   3566777777777666567777


Q ss_pred             eccC
Q 031009          137 PSRL  140 (167)
Q Consensus       137 ~~Dv  140 (167)
                      ..++
T Consensus       402 ~~~I  405 (615)
T 4gsl_A          402 KLSI  405 (615)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            6555

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.59  E-value=0.006  Score=51.08  Aligned_cols=51  Identities=27%  Similarity=0.251  Sum_probs=39.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      +.+++|.+.|.|. |+.|.++|+.|.++|++|.+.|+.........++|++.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~   55 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE   55 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC
Confidence            4578999999999 88999999999999999999998653222333455543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.57  E-value=0.0064  Score=48.30  Aligned_cols=78  Identities=12%  Similarity=0.158  Sum_probs=51.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .++||.++|.|+++-.|+.++..|...|++|.++.+....+++.   +    ...++.+...-....-.....+..-++|
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~---~----~~ADIVI~Avg~p~~I~~~~vk~GavVI  230 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH---T----TKADILIVAVGKPNFITADMVKEGAVVI  230 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH---H----TTCSEEEECCCCTTCBCGGGSCTTCEEE
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHh---c----ccCCEEEECCCCCCCCCHHHcCCCcEEE
Confidence            68999999999988799999999999999999998765444322   1    2225555443322111112223345666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       231 Dvgi~  235 (285)
T 3l07_A          231 DVGIN  235 (285)
T ss_dssp             ECCCE
T ss_pred             Eeccc
Confidence            66655

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.56  E-value=0.0073  Score=48.30  Aligned_cols=78  Identities=13%  Similarity=0.182  Sum_probs=53.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .+.||.++|.|++.-+|+.+++.|+..|++|.++++....+.+..       ...++.+...-.-..-.....+..-++|
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~-------~~ADIVI~Avg~p~~I~~~~vk~GavVI  234 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV-------NKGDILVVATGQPEMVKGEWIKPGAIVI  234 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH-------TTCSEEEECCCCTTCBCGGGSCTTCEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHh-------ccCCEEEECCCCcccCCHHHcCCCcEEE
Confidence            689999999999888999999999999999999987765443322       2225555544333221222223356777


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       235 DVgi~  239 (301)
T 1a4i_A          235 DCGIN  239 (301)
T ss_dssp             ECCCB
T ss_pred             EccCC
Confidence            77776

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.55  E-value=0.0036  Score=52.83  Aligned_cols=56  Identities=14%  Similarity=0.327  Sum_probs=46.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ++++|.|+ |-+|+.+|+.|.++|++|++++.+++.++++.+++       ++..+.+|-++.+
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~   59 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPD   59 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHH
Confidence            36899988 89999999999999999999999998776554332       4677889999887

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.53  E-value=0.005  Score=48.90  Aligned_cols=36  Identities=22%  Similarity=0.218  Sum_probs=32.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      -+|++++|+||+|++|+..++.+...|++|+++++.
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            468899999999999999999998999999988753

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.52  E-value=0.0085  Score=47.25  Aligned_cols=40  Identities=15%  Similarity=0.299  Sum_probs=35.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~  121 (167)
                      +++.|.|+ |.+|..++..|++.|++|++++++++.+++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            57888888 89999999999999999999999988776543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.51  E-value=0.0025  Score=50.72  Aligned_cols=39  Identities=31%  Similarity=0.361  Sum_probs=34.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +++|+|++|++|...++.+...|++|+++++++++.+.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999998888999999999987766543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.50  E-value=0.0042  Score=49.95  Aligned_cols=40  Identities=28%  Similarity=0.253  Sum_probs=35.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      +|++++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~  207 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL  207 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            7899999999 9999999999888999 89999998776543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.50  E-value=0.0087  Score=47.57  Aligned_cols=78  Identities=13%  Similarity=0.142  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      +++||.++|.|++.-+|+.+++.|+..|++|.++++....+.+...+       .++.+...-....-.....+..-++|
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~-------ADIVI~Avg~p~lI~~~~vk~GavVI  228 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVEN-------ADLLIVAVGKPGFIPGDWIKEGAIVI  228 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHH-------CSEEEECSCCTTCBCTTTSCTTCEEE
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhcc-------CCEEEECCCCcCcCCHHHcCCCcEEE
Confidence            68999999999988889999999999999999999877665443322       14544433322211111223345666


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.|++
T Consensus       229 DVgi~  233 (288)
T 1b0a_A          229 DVGIN  233 (288)
T ss_dssp             ECCCE
T ss_pred             EccCC
Confidence            76665

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.50  E-value=0.0048  Score=48.90  Aligned_cols=40  Identities=23%  Similarity=0.249  Sum_probs=35.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      |+ ++|+|++|++|...++.+...|++|+++++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999999998889999999999998876544

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.48  E-value=0.0035  Score=50.88  Aligned_cols=41  Identities=20%  Similarity=0.235  Sum_probs=34.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~r~~~~~~~  119 (167)
                      +|++++|+||+|++|...++.... .|++|+++++++++.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~  212 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW  212 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence            688999999999999988776655 58999999998876544

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.45  E-value=0.0065  Score=52.88  Aligned_cols=63  Identities=14%  Similarity=0.249  Sum_probs=49.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++++|+|.|+ ||+|.++++.|+..| .++.++|.+                   ..+.+.+.+.+++..+..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            567889999988 899999999999999 579998754                   24677777778776555567666


Q ss_pred             eccC
Q 031009          137 PSRL  140 (167)
Q Consensus       137 ~~Dv  140 (167)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            6554

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.43  E-value=0.0068  Score=49.24  Aligned_cols=39  Identities=21%  Similarity=0.214  Sum_probs=33.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      -+|++++|+||+|++|+..++.+...|++|++++ ++++.
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~  220 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS  220 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH
Confidence            4688999999999999999998888999999888 44444

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.42  E-value=0.011  Score=47.43  Aligned_cols=35  Identities=23%  Similarity=0.283  Sum_probs=31.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE  115 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~  115 (167)
                      ++++||||+|.+|..++..|+++|  .+|+++|++++
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            369999999999999999999998  78999998776

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.40  E-value=0.023  Score=45.17  Aligned_cols=45  Identities=11%  Similarity=0.141  Sum_probs=36.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--eEEEEeC--ChhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--SAERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r--~~~~~~~~~~~l~~  126 (167)
                      +++||||+|.+|..++..|+.+|.  +++++|+  ++++++....++..
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~   50 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHH
Confidence            599999999999999999999884  6899999  77666554555544

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.40  E-value=0.0026  Score=50.69  Aligned_cols=38  Identities=32%  Similarity=0.454  Sum_probs=33.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +++|+|++|++|+..++.+...|++|+++++++++.+.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~  190 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY  190 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            79999999999999999888899999999998776644

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.40  E-value=0.0084  Score=47.40  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      ..+.||+++|.|+ |++|+++++.+...|++|++++|+.++.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4689999999997 99999999999999999999999986654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.40  E-value=0.0045  Score=49.79  Aligned_cols=85  Identities=18%  Similarity=0.121  Sum_probs=55.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH-----HHHHHHHhCCceEEEEeccCCChhhhh--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-----VQSLREEFGEQHVWVPPSRLVSAPYNI--  147 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~~Dv~d~~~~~--  147 (167)
                      ...+.||++.|.|. |.||+++++.+...|++|+.++|+.+..+..     ...+.+.....++.+..+-.++.....  
T Consensus       134 ~~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~  212 (315)
T 3pp8_A          134 EYTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIIN  212 (315)
T ss_dssp             CCCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBS
T ss_pred             CCCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhcc
Confidence            35789999999988 9999999999999999999999876421100     012222222236777776655432111  


Q ss_pred             -----hhccceEEEEecc
Q 031009          148 -----IYKYSWLLVNIYV  160 (167)
Q Consensus       148 -----~~~~~dilvN~ai  160 (167)
                           ..+..-++||.+-
T Consensus       213 ~~~l~~mk~gailIN~aR  230 (315)
T 3pp8_A          213 SELLDQLPDGAYVLNLAR  230 (315)
T ss_dssp             HHHHTTSCTTEEEEECSC
T ss_pred             HHHHhhCCCCCEEEECCC
Confidence                 1222678888773

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.38  E-value=0.0074  Score=50.63  Aligned_cols=79  Identities=18%  Similarity=0.276  Sum_probs=55.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEEe
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVPP  137 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  137 (167)
                      +.+++|+|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+++..+..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            46778999988 999999999999999 5788887431                   35666667776655554666666


Q ss_pred             ccCCChhhhhhhccceEEEEe
Q 031009          138 SRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       138 ~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      .++.+... .+....|++|++
T Consensus       117 ~~i~~~~~-~~~~~~DlVi~~  136 (434)
T 1tt5_B          117 NKIQDFND-TFYRQFHIIVCG  136 (434)
T ss_dssp             SCGGGBCH-HHHTTCSEEEEC
T ss_pred             cccchhhH-HHhcCCCEEEEC
Confidence            66654332 334446777765

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.32  E-value=0.0077  Score=47.33  Aligned_cols=45  Identities=20%  Similarity=0.285  Sum_probs=38.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .+|.++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678999987 8999999999999996 7999999998887766554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.32  E-value=0.003  Score=49.51  Aligned_cols=43  Identities=21%  Similarity=0.367  Sum_probs=37.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      .+++|+++|.|+ |++|+++++.|.+.|++|++++|+.++.++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            567899999997 7999999999999999999999998766544

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.32  E-value=0.0084  Score=46.41  Aligned_cols=45  Identities=27%  Similarity=0.352  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      .++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.++..++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            5778 8999997 7899999999999999999999998776655444

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.31  E-value=0.013  Score=47.70  Aligned_cols=85  Identities=20%  Similarity=0.079  Sum_probs=54.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH-------HHHHHHhCCceEEEEeccCCChhh--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV-------QSLREEFGEQHVWVPPSRLVSAPY--  145 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~Dv~d~~~--  145 (167)
                      ...+.||++.|.|. |.||+++++.|...|++|+..+|+....+...       ..+.+.....++.+..+-.++...  
T Consensus       159 ~~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~l  237 (351)
T 3jtm_A          159 AYDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGM  237 (351)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred             cccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHh
Confidence            35799999999987 88999999999999999999998753222111       123222233356666655543321  


Q ss_pred             -----hhhhccceEEEEecc
Q 031009          146 -----NIIYKYSWLLVNIYV  160 (167)
Q Consensus       146 -----~~~~~~~dilvN~ai  160 (167)
                           -...+..-++||.+-
T Consensus       238 i~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          238 FNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             BSHHHHHHSCTTEEEEECSC
T ss_pred             hcHHHHhcCCCCCEEEECcC
Confidence                 112223678888763

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.31  E-value=0.0091  Score=48.52  Aligned_cols=80  Identities=19%  Similarity=0.270  Sum_probs=55.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+.++.|+|.|+ ||+|.++++.|+..| .++.++|.+                   ..+.+.+.+.+.+..+..++..+
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~  111 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD  111 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence            466778999997 899999999999999 478888643                   23566677777766555567777


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ..++.+.. ..+....|++|++
T Consensus       112 ~~~~~~~~-~~~~~~~dvVv~~  132 (346)
T 1y8q_A          112 TEDIEKKP-ESFFTQFDAVCLT  132 (346)
T ss_dssp             CSCGGGCC-HHHHTTCSEEEEE
T ss_pred             ecccCcch-HHHhcCCCEEEEc
Confidence            66665422 2233345666664

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.25  E-value=0.012  Score=47.96  Aligned_cols=50  Identities=18%  Similarity=0.219  Sum_probs=42.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      ++++++.|+|++|++|..++..++..|  .+|+++|.++++++....+|...
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~   57 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC   57 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC
Confidence            556789999999999999999999999  47999999988877666666543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.23  E-value=0.011  Score=47.29  Aligned_cols=41  Identities=20%  Similarity=0.217  Sum_probs=35.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++.+...|++|+++++++++.+.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  205 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNL  205 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            46889999997 899999999888899999999998877653

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.22  E-value=0.048  Score=45.68  Aligned_cols=40  Identities=15%  Similarity=0.179  Sum_probs=36.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++...
T Consensus       217 ~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra  256 (435)
T 3gvp_A          217 MFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICA  256 (435)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             eecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhh
Confidence            689999999998 7899999999999999999999987543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.19  E-value=0.0074  Score=48.73  Aligned_cols=42  Identities=29%  Similarity=0.256  Sum_probs=36.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|+ |++|...++.+...|++|+++++++++.+.+
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~  219 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA  219 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            36889999999 9999999988888899999999988776543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.19  E-value=0.01  Score=48.04  Aligned_cols=41  Identities=27%  Similarity=0.331  Sum_probs=36.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+| +|++|...++.+...|++|+++++++++.+.
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  228 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR  228 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH
Confidence            4688999999 7999999999888899999999998877654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.12  E-value=0.0095  Score=47.75  Aligned_cols=40  Identities=18%  Similarity=0.150  Sum_probs=35.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~~~~  119 (167)
                      +|++++|+|+ |++|...++.+...  |++|+++++++++.+.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~  211 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF  211 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH
Confidence            7899999999 89999999888788  9999999998876543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.10  E-value=0.056  Score=45.58  Aligned_cols=41  Identities=17%  Similarity=0.204  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .++.||+++|.|. |.||+.+++.+...|++|+++++++...
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a  283 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICA  283 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence            3689999999997 6799999999999999999999987543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.06  E-value=0.048  Score=45.73  Aligned_cols=41  Identities=15%  Similarity=0.203  Sum_probs=36.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .++.||+++|.|. |-||+.+++.|...|++|+++++++...
T Consensus       207 ~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a  247 (436)
T 3h9u_A          207 VMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINA  247 (436)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhh
Confidence            3688999999996 8999999999999999999999987554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.03  E-value=0.0081  Score=45.45  Aligned_cols=54  Identities=11%  Similarity=0.057  Sum_probs=42.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..++.    . .    .+.++.+|.++.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~----~-~----~~~~i~gd~~~~~   62 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL----R-S----GANFVHGDPTRVS   62 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH----H-T----TCEEEESCTTCHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH----h-c----CCeEEEcCCCCHH
Confidence            346889997 8999999999999999 99999988765432    2 1    3667888998876

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.02  E-value=0.012  Score=47.45  Aligned_cols=41  Identities=22%  Similarity=0.246  Sum_probs=35.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++..... |++|+++++++++.+.
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~  226 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL  226 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence            46889999999 89999998887778 9999999998876543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.98  E-value=0.012  Score=47.14  Aligned_cols=41  Identities=20%  Similarity=0.267  Sum_probs=35.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++.+...|++|+++++++++.+.
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  215 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD  215 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            46889999997 999999999888899999999998887653

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=95.96  E-value=0.029  Score=44.86  Aligned_cols=79  Identities=15%  Similarity=0.189  Sum_probs=56.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .+.||.++|.|.|.=.|+-++..|+++|++|.++......+.+...       ..++.+...-....-.....+..-++|
T Consensus       176 ~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~-------~ADIvV~A~G~p~~i~~d~vk~GavVI  248 (303)
T 4b4u_A          176 EIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVK-------QADIIVGAVGKAELIQKDWIKQGAVVV  248 (303)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHH-------TCSEEEECSCSTTCBCGGGSCTTCEEE
T ss_pred             CCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhh-------cCCeEEeccCCCCccccccccCCCEEE
Confidence            6899999999999999999999999999999999876655543322       125666554444333334445566777


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.+++.
T Consensus       249 DVGin~  254 (303)
T 4b4u_A          249 DAGFHP  254 (303)
T ss_dssp             ECCCBC
T ss_pred             Eeceec
Confidence            777763

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.96  E-value=0.045  Score=45.15  Aligned_cols=43  Identities=14%  Similarity=0.146  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      .+++++++|.|+ |.+|...++.+...|++|+++|++.++++..
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  223 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQV  223 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            357889999999 8999999999999999999999998766544

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.95  E-value=0.04  Score=46.97  Aligned_cols=86  Identities=12%  Similarity=0.080  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH------HHHHHhCCceEEEEeccCC---Chhhh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ------SLREEFGEQHVWVPPSRLV---SAPYN  146 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~------~l~~~~~~~~~~~~~~Dv~---d~~~~  146 (167)
                      ..+.||++.|.|. |.||+.+|+.+...|++|++++++.....+...      .+.+.....++.+..+...   +.+.-
T Consensus       273 ~~L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l  351 (494)
T 3d64_A          273 VMIAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHM  351 (494)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCHHHH
T ss_pred             cccCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCHHHH
Confidence            3689999999986 889999999999999999999999865322111      1223223335555554221   11111


Q ss_pred             hhhccceEEEEeccCc
Q 031009          147 IIYKYSWLLVNIYVPS  162 (167)
Q Consensus       147 ~~~~~~dilvN~ai~~  162 (167)
                      ...+..-++||.+--.
T Consensus       352 ~~MK~gAilINvgrg~  367 (494)
T 3d64_A          352 KAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             HHCCTTEEEEECSSSS
T ss_pred             hhCCCCcEEEEcCCCc
Confidence            2223366788877533

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.91  E-value=0.0083  Score=48.06  Aligned_cols=39  Identities=26%  Similarity=0.358  Sum_probs=34.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      +|++++|+|+ |++|...++.+...|+ +|+++++++++.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~  203 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA  203 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            7899999999 9999999998888998 8999999876654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.90  E-value=0.045  Score=44.08  Aligned_cols=48  Identities=17%  Similarity=0.249  Sum_probs=40.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      +.+++.|+|+ |.+|.+++..|+..|.  +|+++|+++++++....+|...
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~   53 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG   53 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc
Confidence            3457999996 9999999999999985  8999999998888777777653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=95.89  E-value=0.0058  Score=49.16  Aligned_cols=37  Identities=32%  Similarity=0.382  Sum_probs=32.1

Q ss_pred             CCCCCE-EEEeCCCC-----------------c-hHHHHHHHHHHCCCeEEEEeCC
Q 031009           77 MLPPYN-VLITGSTK-----------------G-IGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        77 ~l~gk~-vlITGas~-----------------G-IG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ++.||+ ++||+|+.                 | .|.++|+++++.|+.|+++.+.
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            467877 99988775                 6 9999999999999999998874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.89  E-value=0.019  Score=46.66  Aligned_cols=42  Identities=24%  Similarity=0.255  Sum_probs=35.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      -+|.+++|+|+ |++|...++.+...|++|+++++++++.+.+
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a  234 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA  234 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            36889999997 8999999988888999999999988876543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.88  E-value=0.042  Score=44.24  Aligned_cols=37  Identities=16%  Similarity=0.180  Sum_probs=34.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      .+.||.++|.|++.-+|+.+++.|+..|++|.+++|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence            7899999999997778999999999999999999886

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.88  E-value=0.018  Score=50.54  Aligned_cols=81  Identities=16%  Similarity=0.276  Sum_probs=56.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCCh-------------------hHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+.+..|+|.|+ ||+|.++++.|+..| .++.++|.+.                   .+.+.+.+.+....+..++..+
T Consensus        14 kL~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~   92 (640)
T 1y8q_B           14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAY   92 (640)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEE
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEE
Confidence            355678999998 999999999999999 5799988542                   2345555666655555577788


Q ss_pred             eccCCChh-hhhhhccceEEEEe
Q 031009          137 PSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      ..++++.. ...+....|++|++
T Consensus        93 ~~~i~~~~~~~~~~~~~DlVvda  115 (640)
T 1y8q_B           93 HDSIMNPDYNVEFFRQFILVMNA  115 (640)
T ss_dssp             ESCTTSTTSCHHHHTTCSEEEEC
T ss_pred             ecccchhhhhHhhhcCCCEEEEC
Confidence            88886543 22344456777765

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.87  E-value=0.018  Score=46.79  Aligned_cols=84  Identities=15%  Similarity=0.059  Sum_probs=54.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH-----HHHHHHHhCCceEEEEeccCCChhhh----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-----VQSLREEFGEQHVWVPPSRLVSAPYN----  146 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~~~Dv~d~~~~----  146 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|+..+|+....+..     ...+.+.....++.+..+-.+.....    
T Consensus       169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~  247 (345)
T 4g2n_A          169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDH  247 (345)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCH
T ss_pred             cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCH
Confidence            4789999999987 9999999999999999999999975322110     01222222223677766665543211    


Q ss_pred             ---hhhccceEEEEecc
Q 031009          147 ---IIYKYSWLLVNIYV  160 (167)
Q Consensus       147 ---~~~~~~dilvN~ai  160 (167)
                         ...+..-++||.+-
T Consensus       248 ~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          248 DRIAKIPEGAVVINISR  264 (345)
T ss_dssp             HHHHHSCTTEEEEECSC
T ss_pred             HHHhhCCCCcEEEECCC
Confidence               11223678888763

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.85  E-value=0.014  Score=43.81  Aligned_cols=38  Identities=26%  Similarity=0.370  Sum_probs=33.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +++.|.| .|.+|.++++.|.+.|++|++++|+++..++
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4588888 6999999999999999999999999876554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.85  E-value=0.022  Score=45.82  Aligned_cols=44  Identities=16%  Similarity=0.096  Sum_probs=37.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      +++.|.|+ |.+|.+++..|+..|. +|+++|++++.++....++.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~   54 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS   54 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHH
Confidence            46889998 9999999999999997 99999999887776444443

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.84  E-value=0.016  Score=45.85  Aligned_cols=78  Identities=10%  Similarity=0.179  Sum_probs=51.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC--CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWL  154 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~di  154 (167)
                      .++||.++|.|++.-+|+.+++.|+..  |++|.++.+....+.+..       ...++.+...-....-.....+..-+
T Consensus       155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~-------~~ADIVI~Avg~p~~I~~~~vk~Gav  227 (281)
T 2c2x_A          155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALT-------RQADIVVAAVGVAHLLTADMVRPGAA  227 (281)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHHH-------TTCSEEEECSCCTTCBCGGGSCTTCE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHHH-------hhCCEEEECCCCCcccCHHHcCCCcE
Confidence            689999999999877899999999999  899999988775543322       22245554433222111111222456


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +|+.+++
T Consensus       228 VIDVgi~  234 (281)
T 2c2x_A          228 VIDVGVS  234 (281)
T ss_dssp             EEECCEE
T ss_pred             EEEccCC
Confidence            6666655

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.84  E-value=0.031  Score=45.06  Aligned_cols=38  Identities=24%  Similarity=0.197  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|+.++|+.
T Consensus       141 ~~l~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~  178 (330)
T 4e5n_A          141 TGLDNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKA  178 (330)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSC
T ss_pred             CccCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4689999999987 8999999999999999999999976

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=95.83  E-value=0.014  Score=47.04  Aligned_cols=85  Identities=21%  Similarity=0.170  Sum_probs=53.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH-----HHHHHHHHhCCceEEEEeccCCChhhhh--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS-----AVQSLREEFGEQHVWVPPSRLVSAPYNI--  147 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~-----~~~~l~~~~~~~~~~~~~~Dv~d~~~~~--  147 (167)
                      ...+.||++.|.|. |.||+++++.|...|++|+.++|+....+.     ....+.+.....++.+..+-.+......  
T Consensus       135 ~~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~  213 (324)
T 3hg7_A          135 YQGLKGRTLLILGT-GSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFT  213 (324)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBC
T ss_pred             CcccccceEEEEEE-CHHHHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH
Confidence            34799999999988 899999999999999999999987532110     0011222112236777666554432111  


Q ss_pred             -----hhccceEEEEecc
Q 031009          148 -----IYKYSWLLVNIYV  160 (167)
Q Consensus       148 -----~~~~~dilvN~ai  160 (167)
                           ..+..-++||.+-
T Consensus       214 ~~~l~~mk~gailIN~aR  231 (324)
T 3hg7_A          214 ASRFEHCKPGAILFNVGR  231 (324)
T ss_dssp             TTTTTCSCTTCEEEECSC
T ss_pred             HHHHhcCCCCcEEEECCC
Confidence                 1122568888763

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.83  E-value=0.012  Score=45.72  Aligned_cols=42  Identities=21%  Similarity=0.404  Sum_probs=35.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~  120 (167)
                      .+++ +++|.|+ ||.|++++..|.+.|+ +|++++|+.++.+++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            3567 7999987 8999999999999997 899999998776543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.82  E-value=0.018  Score=46.54  Aligned_cols=49  Identities=14%  Similarity=0.213  Sum_probs=40.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ...++++.|+|+ |++|.+++..|+..|.  +|+++|+++++++....++..
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~   56 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLED   56 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhh
Confidence            455678999996 9999999999999885  799999998888776667754

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=95.80  E-value=0.019  Score=46.70  Aligned_cols=41  Identities=24%  Similarity=0.298  Sum_probs=35.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+| +|++|...++.+...| ++|+++++++++.+.
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  235 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKL  235 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHH
Confidence            3588999999 8999999999888899 699999998876543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.80  E-value=0.019  Score=44.77  Aligned_cols=40  Identities=15%  Similarity=0.221  Sum_probs=35.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +++.|.|++|.+|.++++.|.+.|++|++++|+++..++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~   51 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRL   51 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            4799999999999999999999999999999998776554

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.80  E-value=0.025  Score=45.60  Aligned_cols=40  Identities=28%  Similarity=0.274  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      ..+.||++.|.|. |.||+++++.|...|++|++++++.+.
T Consensus       142 ~~l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~  181 (333)
T 2d0i_A          142 ESLYGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV  181 (333)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH
T ss_pred             CCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence            4789999999987 999999999999999999999998764

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.78  E-value=0.016  Score=44.38  Aligned_cols=39  Identities=21%  Similarity=0.379  Sum_probs=32.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      .+.++++.|.| .|.+|.++++.|++.|++|++++|+++.
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            56778888887 4999999999999999999999999876

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.75  E-value=0.026  Score=46.15  Aligned_cols=39  Identities=28%  Similarity=0.434  Sum_probs=35.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      +++||++.|.|. |.+|+.+++.+.+.|++|++.|.+.+.
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            689999999976 999999999999999999999988654

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.75  E-value=0.026  Score=46.02  Aligned_cols=39  Identities=26%  Similarity=0.189  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|+.++++..
T Consensus       156 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~  194 (352)
T 3gg9_A          156 RVLKGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENS  194 (352)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHH
T ss_pred             ccCCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCC
Confidence            4789999999987 99999999999999999999998753

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.75  E-value=0.029  Score=45.88  Aligned_cols=40  Identities=13%  Similarity=0.190  Sum_probs=35.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAE  115 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~  115 (167)
                      ...+.||++.|.|. |.||+++++.|...|++ |++++|+..
T Consensus       159 ~~~l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~  199 (364)
T 2j6i_A          159 AYDIEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQAL  199 (364)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCC
T ss_pred             cccCCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCcc
Confidence            34789999999987 99999999999999997 999998763

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.73  E-value=0.022  Score=47.34  Aligned_cols=55  Identities=13%  Similarity=0.195  Sum_probs=44.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ..++|.|. |-+|+.+++.|.+.|+.|++++++++..++..    ..    .+.++.+|.++.+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~----g~~vi~GDat~~~   59 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KF----GMKVFYGDATRMD   59 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HT----TCCCEESCTTCHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hC----CCeEEEcCCCCHH
Confidence            35899997 88999999999999999999999988765432    22    2456788998876

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.73  E-value=0.026  Score=45.82  Aligned_cols=41  Identities=10%  Similarity=0.027  Sum_probs=36.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHH-HCCCeEEEEeCChhHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFL-KAGDNVIICSRSAERV  117 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~-~~G~~Vi~~~r~~~~~  117 (167)
                      ..+.||++.|.|. |.||+++++.+. ..|++|++++++.+..
T Consensus       159 ~~l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~  200 (348)
T 2w2k_A          159 HNPRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADA  200 (348)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCH
T ss_pred             cCCCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcch
Confidence            4789999999987 999999999999 9999999999986543

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.69  E-value=0.043  Score=44.34  Aligned_cols=40  Identities=20%  Similarity=0.098  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      ..+.||++.|.|. |.||+.+++.+...|++|+.++++.+.
T Consensus       161 ~~l~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~  200 (335)
T 2g76_A          161 TELNGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP  200 (335)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH
T ss_pred             cCCCcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence            4789999999987 999999999999999999999987654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.69  E-value=0.034  Score=45.22  Aligned_cols=50  Identities=18%  Similarity=0.292  Sum_probs=36.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-------eEEEEeCChh--HHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAE--RVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-------~Vi~~~r~~~--~~~~~~~~l~~  126 (167)
                      .++.-+|.|+||+|+||..++..|+....       .+.++|..+.  .++-...+|..
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~   79 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED   79 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh
Confidence            34455799999999999999999987642       6999998653  34444555654

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.68  E-value=0.039  Score=45.67  Aligned_cols=84  Identities=13%  Similarity=0.046  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH-------HHHHHHhCCceEEEEeccCCChhh---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV-------QSLREEFGEQHVWVPPSRLVSAPY---  145 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~Dv~d~~~---  145 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|+..+++....+...       ..+.+.....++.+..+-++....   
T Consensus       187 ~~l~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li  265 (393)
T 2nac_A          187 YDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMI  265 (393)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCB
T ss_pred             ccCCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHh
Confidence            4789999999987 99999999999999999999998753322110       112222223356666655543221   


Q ss_pred             --h--hhhccceEEEEecc
Q 031009          146 --N--IIYKYSWLLVNIYV  160 (167)
Q Consensus       146 --~--~~~~~~dilvN~ai  160 (167)
                        .  ...+..-++||.+-
T Consensus       266 ~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          266 NDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             SHHHHTTSCTTEEEEECSC
T ss_pred             hHHHHhhCCCCCEEEECCC
Confidence              1  11222567888764

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=95.68  E-value=0.021  Score=46.04  Aligned_cols=42  Identities=26%  Similarity=0.190  Sum_probs=35.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|+ |++|...++.....|++ |+++++++++.+.+
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  220 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA  220 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            46889999998 99999999888889997 99999988776543

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=95.68  E-value=0.026  Score=45.37  Aligned_cols=41  Identities=24%  Similarity=0.269  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++.....|+ +|+++++++++.+.
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  211 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK  211 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            46889999996 8999999988888998 89999998876543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=95.67  E-value=0.025  Score=48.15  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+.||+++|.|+ |.||+.+++.+...|++|+++++++...+.
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~  312 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQ  312 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            578999999997 999999999999999999999999876543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=95.67  E-value=0.021  Score=47.23  Aligned_cols=42  Identities=21%  Similarity=0.248  Sum_probs=37.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+.+++++|.|+ |.+|+.+++.+...|++|+++|++.+.++.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~  210 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQ  210 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            467899999997 899999999999999999999999876654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=95.66  E-value=0.025  Score=45.80  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=35.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  232 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK  232 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            46889999995 9999999998888998 79999998887654

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.65  E-value=0.049  Score=43.40  Aligned_cols=40  Identities=25%  Similarity=0.255  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|++++++.+.
T Consensus       138 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (307)
T 1wwk_A          138 IELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE  177 (307)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4789999999987 999999999999999999999998754

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.65  E-value=0.008  Score=48.48  Aligned_cols=40  Identities=28%  Similarity=0.311  Sum_probs=36.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      ...+.||++.|.|. |.||+++++.+...|++|+.++|+.+
T Consensus       132 ~~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  171 (324)
T 3evt_A          132 TSTLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGH  171 (324)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcc
Confidence            45799999999988 89999999999999999999998753

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=95.65  E-value=0.026  Score=44.95  Aligned_cols=45  Identities=20%  Similarity=0.329  Sum_probs=35.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--eEEEEeC--ChhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSR--SAERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r--~~~~~~~~~~~l~~  126 (167)
                      +++||||+|++|..++..|+..|.  .++++|+  ++++++....++..
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~   50 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD   50 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHH
Confidence            589999999999999999998883  5888998  66555544455543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.63  E-value=0.04  Score=44.20  Aligned_cols=48  Identities=10%  Similarity=0.080  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC--hhHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLR  125 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~--~~~~~~~~~~l~  125 (167)
                      +++.+++.|.|+ |.+|..++..|+..|. +|+++|++  ++..+....++.
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~   55 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDML   55 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHH
Confidence            345678999997 9999999999999998 99999998  555554444444

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.62  E-value=0.055  Score=43.21  Aligned_cols=41  Identities=20%  Similarity=0.058  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      ...+.||++.|.|. |.||+++++.+...|++|++++++.+.
T Consensus       137 ~~~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (313)
T 2ekl_A          137 GLELAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIR  177 (313)
T ss_dssp             CCCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CCCCCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence            34789999999987 999999999999999999999998754

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.61  E-value=0.028  Score=44.88  Aligned_cols=39  Identities=21%  Similarity=0.231  Sum_probs=33.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +++.|.|+ |.+|..++..|++.|++|.+++|+++..++.
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~   43 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEI   43 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            46888887 8999999999999999999999998776544

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=95.59  E-value=0.027  Score=45.55  Aligned_cols=41  Identities=15%  Similarity=0.221  Sum_probs=35.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  231 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAK  231 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            46889999995 9999999998888998 79999998887654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=95.58  E-value=0.027  Score=45.58  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=35.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      -.|++++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus       194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  235 (376)
T 1e3i_A          194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK  235 (376)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            46889999996 9999999988888998 79999998887653

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.56  E-value=0.04  Score=44.39  Aligned_cols=40  Identities=23%  Similarity=0.152  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      ..+.||++.|.|. |.||+++++.|...|++|++++|+.+.
T Consensus       146 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~  185 (334)
T 2dbq_A          146 YDVYGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE  185 (334)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cCCCCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch
Confidence            4688999999986 999999999999999999999998765

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.55  E-value=0.036  Score=43.95  Aligned_cols=81  Identities=20%  Similarity=0.137  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH-----HHHHHHHHhCCceEEEEeccCCChhh-----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS-----AVQSLREEFGEQHVWVPPSRLVSAPY-----  145 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~-----~~~~l~~~~~~~~~~~~~~Dv~d~~~-----  145 (167)
                      ..+.||++.|.|. |.||+++++.|...|++|+.++|+.+..+.     ..+++-..   .++.+..+-.+....     
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~---aDiV~l~~P~t~~t~~li~~  193 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQ---SDFVLIAIPLTDKTRGMVNS  193 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHH---CSEEEECCCCCTTTTTCBSH
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhc---cCeEEEEeeccccchhhhhH
Confidence            4689999999987 999999999999999999999987643210     11222222   256666665544321     


Q ss_pred             h--hhhccceEEEEecc
Q 031009          146 N--IIYKYSWLLVNIYV  160 (167)
Q Consensus       146 ~--~~~~~~dilvN~ai  160 (167)
                      .  ...+..-++||.+-
T Consensus       194 ~~l~~mk~gailIN~aR  210 (290)
T 3gvx_A          194 RLLANARKNLTIVNVAR  210 (290)
T ss_dssp             HHHTTCCTTCEEEECSC
T ss_pred             HHHhhhhcCceEEEeeh
Confidence            1  11223678888773

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.54  E-value=0.023  Score=45.73  Aligned_cols=41  Identities=24%  Similarity=0.209  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      ..+.||++.|.|. |.||+++++.|...|++|++++++.+..
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~  191 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRP  191 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCH
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcch
Confidence            4688999999987 9999999999999999999999876533

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.54  E-value=0.03  Score=45.36  Aligned_cols=40  Identities=20%  Similarity=0.206  Sum_probs=33.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      -+|++++|+|++|++|...++.....|++|+... ++++.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            5688999999999999999998888999998886 555543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.54  E-value=0.023  Score=45.73  Aligned_cols=38  Identities=24%  Similarity=0.260  Sum_probs=31.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      -+|++++|+|++|++|...++.....|++++++.+..+
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            36889999999999999998877778999887775543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.48  E-value=0.03  Score=45.89  Aligned_cols=41  Identities=34%  Similarity=0.433  Sum_probs=35.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      .-+|++++|+|+ |++|...++.....|+ +|+++++++++.+
T Consensus       211 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  252 (404)
T 3ip1_A          211 IRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRN  252 (404)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            346889999998 8999999988888998 8999999887654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.48  E-value=0.023  Score=46.58  Aligned_cols=42  Identities=21%  Similarity=0.276  Sum_probs=37.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .+.+++++|.|+ |++|+.+++.+...|++|++++++.++.+.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~  210 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQ  210 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            568999999997 899999999999999999999998776544

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.47  E-value=0.04  Score=45.98  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=32.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEE-EEeC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVI-ICSR  112 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi-~~~r  112 (167)
                      +++||+++|+| .|..|...++.|.+.|++|+ +.|+
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            68999999998 59999999999999999988 7777

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=95.46  E-value=0.026  Score=45.64  Aligned_cols=42  Identities=21%  Similarity=0.261  Sum_probs=35.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~  120 (167)
                      -+|++++|+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~  231 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA  231 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            46889999996 9999999988888898 799999988876543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.46  E-value=0.024  Score=45.66  Aligned_cols=41  Identities=27%  Similarity=0.269  Sum_probs=35.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +|++++|+|+ |++|...++.+...|++|+++++++++.+..
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~  220 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEA  220 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            7889999995 9999999988888899999999988765443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.44  E-value=0.018  Score=45.40  Aligned_cols=40  Identities=23%  Similarity=0.171  Sum_probs=34.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++.....|++|++++ ++++.+.
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~  180 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQAL  180 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHH
Confidence            46889999999 9999999988888899999999 7666543

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.42  E-value=0.048  Score=43.69  Aligned_cols=40  Identities=25%  Similarity=0.128  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC-ChhH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAER  116 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r-~~~~  116 (167)
                      ..+.||++.|.|. |.||+++++.+...|++|+++++ +.+.
T Consensus       142 ~~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~  182 (320)
T 1gdh_A          142 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS  182 (320)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh
Confidence            3789999999987 99999999999999999999999 7654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.42  E-value=0.039  Score=44.41  Aligned_cols=48  Identities=17%  Similarity=0.118  Sum_probs=39.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ++.+++.|.|+ |.+|.+++..|+..|. +|+++|+++++++....++..
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            45567999998 9999999999999998 999999999877655555554

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.40  E-value=0.065  Score=45.47  Aligned_cols=40  Identities=20%  Similarity=0.210  Sum_probs=36.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      .+.||++.|.|. |.||+.+++.+...|++|++++++....
T Consensus       254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~  293 (479)
T 1v8b_A          254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA  293 (479)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred             ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhH
Confidence            689999999986 8999999999999999999999998654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=95.39  E-value=0.035  Score=45.01  Aligned_cols=40  Identities=28%  Similarity=0.265  Sum_probs=34.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      -+|++++|+|+ |++|...++.....|+ +|+++++++++.+
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  221 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR  221 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            46889999998 8999999988888998 8999998877654

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.37  E-value=0.041  Score=43.49  Aligned_cols=43  Identities=28%  Similarity=0.427  Sum_probs=35.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~  121 (167)
                      ...+++.|.|. |-+|..+++.|++.|++|++++|++++.++..
T Consensus         7 ~~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~   49 (306)
T 3l6d_A            7 SFEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALV   49 (306)
T ss_dssp             CCSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            33455777775 89999999999999999999999988776543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=95.35  E-value=0.029  Score=45.37  Aligned_cols=46  Identities=20%  Similarity=0.355  Sum_probs=36.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--e-----EEEEeCCh--hHHHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD--N-----VIICSRSA--ERVDSAVQSLRE  126 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~--~-----Vi~~~r~~--~~~~~~~~~l~~  126 (167)
                      +++.||||+|.+|..++..|+..|.  +     ++++|+++  +.++-...+|..
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~   58 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD   58 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh
Confidence            3699999999999999999998874  4     99999964  355555566654

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.32  E-value=0.043  Score=44.58  Aligned_cols=39  Identities=21%  Similarity=0.130  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      ..+.||++.|.|. |.||+++++.|...|++|++.+++.+
T Consensus       164 ~~l~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  202 (347)
T 1mx3_A          164 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS  202 (347)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cCCCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcc
Confidence            4789999999987 99999999999999999999998654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.29  E-value=0.17  Score=40.07  Aligned_cols=44  Identities=14%  Similarity=0.138  Sum_probs=36.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ++.|.|+ |.+|.+++..|+..|.  +|+++|++++.++....++..
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~   47 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHh
Confidence            5889999 9999999999999996  899999999887644444443

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.29  E-value=0.041  Score=42.87  Aligned_cols=38  Identities=16%  Similarity=0.393  Sum_probs=33.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      ++.|.|+ |.+|..++..|++.|++|++++|+++..++.
T Consensus         5 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~   42 (316)
T 2ew2_A            5 KIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAI   42 (316)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             eEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            5888886 9999999999999999999999998766544

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.29  E-value=0.015  Score=43.80  Aligned_cols=43  Identities=33%  Similarity=0.342  Sum_probs=36.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEE-EeCChhHHHHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQS  123 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~-~~r~~~~~~~~~~~  123 (167)
                      .+++.|.| .|.+|.++++.|.+.|++|++ ++|++++.++..++
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~   66 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDR   66 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHH
Confidence            34688888 599999999999999999998 99998887765544

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=95.28  E-value=0.032  Score=45.11  Aligned_cols=41  Identities=17%  Similarity=0.304  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|+ |++|...++.....|+ +|+++++++++.+.
T Consensus       190 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  231 (373)
T 1p0f_A          190 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPK  231 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            46889999995 9999999888777898 79999998877653

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.27  E-value=0.051  Score=43.65  Aligned_cols=43  Identities=16%  Similarity=0.121  Sum_probs=36.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l  124 (167)
                      +++.|.|+ |.+|.+++..|+..|. +|+++|++++.++....++
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l   58 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDL   58 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence            46889998 9999999999999997 9999999988777544444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	167
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-15
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-14
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-13
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-13
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-13
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-13
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	6e-13
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-13
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-13
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-13
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-12
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-12
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-12
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-12
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-12
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-12
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-12
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-12
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-12
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-12
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-12
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	4e-12
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	5e-12
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	7e-12
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	8e-12
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-11
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-11
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-11
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-11
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-11
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-11
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-11
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-11
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-11
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-11
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-11
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-11
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-11
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-10
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-10
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-10
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-10
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-10
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-10
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-10
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-10
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-10
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-10
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-10
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-10
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	7e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	8e-10
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	9e-10
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	9e-10
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-09
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-09
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-09
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-09
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	7e-09
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-08
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-07
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-07
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	8e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	8e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	9e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.001
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.002
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.002
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.003
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.003
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.003
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.003
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.003
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.004
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.004

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 3e-15
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 74  REPMLPPY-----NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
           ++ MLPP         ITG   G+G  +       G   +I SR  + + +  + +  + 
Sbjct: 14  QKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73

Query: 129 GEQHVWVP 136
           G +   + 
Sbjct: 74  GNKVHAIQ 81

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.6 bits (162), Expect = 2e-14
 Identities = 17/54 (31%), Positives = 33/54 (61%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            L+TG ++G+G+ +A+   +AG +V++ SR+ E    A Q L E++G + +   
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 61

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +++TG  +GIG A  +    AG NV +  RSA       + + +EFG +     
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 63.2 bits (153), Expect = 3e-13
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG+T GIG  +A+   K G  V +C+R  E + + ++ LRE   E     
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 57

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 62.9 bits (152), Expect = 5e-13
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG+   IG A A    + G  + +   + E ++ A  S+RE+  E   +V
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 5e-13
 Identities = 19/63 (30%), Positives = 31/63 (49%)

Query: 74  REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           R  ML    V++TG++KGIG  +A    K G +V++ +RS E +   V    E       
Sbjct: 8   RPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH 67

Query: 134 WVP 136
           ++ 
Sbjct: 68  YIA 70

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 6e-13
 Identities = 20/50 (40%), Positives = 27/50 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            ++TG   GIG A+ KE L+ G NV+I SR  ER+ SA   L+       
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 64

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 62.3 bits (151), Expect = 6e-13
 Identities = 15/53 (28%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG ++GIGY + +E    G +V  CSR+ + ++  +   R +  +    V
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 63

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 7e-13
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           VLITG+  GIG   A EF K    +++   +   ++      +    + H +V
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 62.1 bits (150), Expect = 7e-13
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG +KGIGYA+ +E    G  V  CSR+ + +D  ++  RE+       V
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 61

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 61.6 bits (149), Expect = 1e-12
 Identities = 14/53 (26%), Positives = 27/53 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            +ITG+  GIG  +A  F  AG +V++   +A+  +  V  +++  G+     
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR 66

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 1e-12
 Identities = 16/51 (31%), Positives = 24/51 (47%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L+TG+ +GIG A A+  L  G  V +   + E       +L E+F  Q  
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKT 56

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 61.7 bits (149), Expect = 1e-12
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L+TG+ +GIG A+A   +K G  V I   +     +    + +  G    
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA 54

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 61.6 bits (149), Expect = 1e-12
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
           V+ITGS+ GIG + A  F K G  V I  R+ +R++   Q + +      
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAE 56

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 61.3 bits (148), Expect = 2e-12
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
           VLITG   G+G A A      G  + +   S+E ++++  ++ E   +  V
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEV 57

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.1 bits (148), Expect = 2e-12
 Identities = 18/50 (36%), Positives = 25/50 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH 132
            +ITGS+ GIG A A  F + G  V I  R AER++   Q +      + 
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQ 57

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 19/46 (41%), Positives = 27/46 (58%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            V+ITGS+ GIG   A  F + G NV I  RS+ER++   Q + + 
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS 52

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 60.8 bits (147), Expect = 3e-12
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            VL+TG TKGIG+A+ +EF   G  +  C+R+   ++  +   +++  +    V
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 63

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (147), Expect = 3e-12
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            L+TG++ GIG A+A+  ++ G  V+ C+R+   ++      +       +
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTL 63

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 60.4 bits (146), Expect = 3e-12
 Identities = 17/53 (32%), Positives = 28/53 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG+ +GIG  +AK   K+  +VI  SR+ +  DS V  ++    E   + 
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.1 bits (145), Expect = 3e-12
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 12/66 (18%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER------------VDSAVQSLREEFG 129
            VL+  +++GIG A+A    + G  V IC+R+ E             +   +  L E+  
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVK 65

Query: 130 EQHVWV 135
           E  + V
Sbjct: 66  EVDILV 71

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 60.4 bits (146), Expect = 4e-12
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           VLITG   G+G AL   F+  G  V +  +SAER    +  L  + G+  + + 
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAER----LAELETDHGDNVLGIV 57

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 59.8 bits (144), Expect = 5e-12
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            LITGS +GIG A A+ +++ G  V I   + E   +       E G     + 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATA----AEIGPAACAIA 57

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 59.4 bits (143), Expect = 7e-12
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVP 136
            ++TGST GIG  +A      G ++++     A  ++     L  + G + ++  
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 59.2 bits (143), Expect = 8e-12
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            L+TG   G+G  + K  L  G  V     +      A Q L  E GE+ ++V 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEA----AGQQLAAELGERSMFVR 58

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 59.0 bits (142), Expect = 1e-11
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V+ITGS+ G+G ++A  F      V++  RS E   ++V    ++ G + + V 
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 59.0 bits (142), Expect = 1e-11
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            +L+TG+  GIG A    F + G +++   R    +  AV +L  E
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE 52

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHV---WVPPS 138
            L+TG  KGIG A+ ++  +    +V++ +R   R  +AVQ L+ E          +   
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 139 RLVSAPYNIIYKY---SWLLVN 157
           + + A  + + K      +LVN
Sbjct: 66  QSIRALRDFLRKEYGGLDVLVN 87

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 58.9 bits (142), Expect = 1e-11
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            +ITG   GIG   AK F++ G  V+I   + +       ++        V
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFV 59

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            VL+TG+ KGIG    +     G  V+  SR+   +DS V+  
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC 51

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.3 bits (140), Expect = 2e-11
 Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 83  VLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            ++TG+++G G ALA +  +    G  +++ +RS   +    + L  +  +  V +
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 57.7 bits (139), Expect = 3e-11
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF 128
            VLITG+  GIG A  + F K G  ++ C      +  A +++    
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP 53

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 57.3 bits (138), Expect = 3e-11
 Identities = 16/45 (35%), Positives = 27/45 (60%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            +ITG T GIG A+A +F++ G  V+I  R ++  + A +S+   
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP 53

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 3e-11
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE 126
           V++TG  +GIG  + + F+ +G  V+IC +      +  Q L  
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG 52

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 57.0 bits (137), Expect = 5e-11
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
            L++G  +G+G +  +  +  G  V+      E   +    L + 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA 53

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 57.1 bits (137), Expect = 5e-11
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            L TG+ +GIG  +A E  + G +V++   S+ +    V +  ++ G Q V + 
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 62

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.9 bits (137), Expect = 5e-11
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
             L+TG+ KGIG    K    +G  V+  +R+   + S  +  
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC 49

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 56.9 bits (137), Expect = 6e-11
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124
            V+ITG  +G+G   A++ + AG  V++     E   +  + L
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL 49

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 56.3 bits (135), Expect = 8e-11
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            L+TG+++GIG A+A+     G  VI  + S     +    L        + V
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV 59

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 55.8 bits (134), Expect = 1e-10
 Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            ++T      G   A    +AG  V     S ++ D  +++  E + +   
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD-ELEAFAETYPQLKP 52

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 55.7 bits (134), Expect = 1e-10
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 3/54 (5%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
            +ITG   GIG A+A+ F   G ++ I            ++     G + + V 
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAP---EAEAAIRNLGRRVLTVK 58

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 55.8 bits (133), Expect = 2e-10
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWVPPSRLV 141
            L+TG+ K +G ++A+     G  V +   RSA   ++   +L        + V      
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 142 SAPYNIIYKYSWLLV 156
            A   +        V
Sbjct: 65  VATAPVSGADGSAPV 79

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.6 bits (133), Expect = 2e-10
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 6/59 (10%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           P +V++TG+ +GIG  L ++ +K  +  ++I  +R  E+       L+     +   +P
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----ATELKSIKDSRVHVLP 57

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 2e-10
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS 142
           +++T + +GIG A A  F + G  VI    +  ++    +    +     V     +   
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT---RVLDVTKKKQI 65

Query: 143 APYNIIYKYSWLLVN 157
             +    +   +L N
Sbjct: 66  DQFANEVERLDVLFN 80

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 54.7 bits (130), Expect = 2e-10
 Identities = 14/76 (18%), Positives = 27/76 (35%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS 142
           V + G T  +G  LA      G  +++ SR  E+ ++     R   G+  +    +   +
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAA 62

Query: 143 APYNIIYKYSWLLVNI 158
              +I          I
Sbjct: 63  EACDIAVLTIPWEHAI 78

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 55.3 bits (132), Expect = 2e-10
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWVPP 137
            +ITG  + IG+++A    + G  V++  R +E      V  L        V    
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKG 59

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 54.8 bits (132), Expect = 3e-10
 Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 21/75 (28%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER---------------------VDSA 120
            VL+TG  +GIG A+A+ F + G  V +C    E                          
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRF 66

Query: 121 VQSLREEFGEQHVWV 135
           V+      G   V V
Sbjct: 67  VEEAAYALGRVDVLV 81

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 54.7 bits (131), Expect = 3e-10
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDN-------VIICSRSAERVDSAVQSLREEFGEQHVWV 135
           +LITG+ KGIG A+A EF +A  +       +++ SR+A  ++      R E        
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 4e-10
 Identities = 11/71 (15%), Positives = 23/71 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS 142
            +ITG   G+G A A+  +  G + ++        ++  + L          V   + V 
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 67

Query: 143 APYNIIYKYSW 153
               +      
Sbjct: 68  TALALAKGKFG 78

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 54.7 bits (130), Expect = 4e-10
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
             LI G  + K I Y +A+     G  +     + E ++  V+ + +E    +V+
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVY 60

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 54.1 bits (129), Expect = 5e-10
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
            V++ G    +G A+ + F K G  V+    SA  
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 38

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 54.4 bits (130), Expect = 5e-10
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWV 135
            L+TG+ +GIG  +A E  + G  VI+    S E  +  V ++++   +     
Sbjct: 21  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 53.9 bits (128), Expect = 7e-10
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 82  NVLITGSTKGIGYALAKEFL---KAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
           ++LITG  +G+G  L K  L   +   ++    R+ E+    ++ L +     H+ 
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHIL 58

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 53.9 bits (128), Expect = 8e-10
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 83  VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLV 141
           VL+TG T G+G  +A+   + G  ++++ SRS    D A + + E           +  V
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 142 SAPYNIIYKYSW 153
           +   ++      
Sbjct: 72  TDRESVRELLGG 83

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 53.5 bits (128), Expect = 9e-10
 Identities = 8/55 (14%), Positives = 17/55 (30%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           NV+   +  GIG   ++E +K      +     E   +  +           +  
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 53.6 bits (128), Expect = 9e-10
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           +VL+TG  +GIG A+A+     G  V +  R +       
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF 48

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 53.2 bits (127), Expect = 1e-09
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVP 136
           V++TG+++GIG A+A    KAG  V++    + +    V    E +G Q +   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFG 57

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 53.2 bits (126), Expect = 1e-09
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
             I G     G G+A+AK    AG  +++ +             R +F +  V 
Sbjct: 11  AFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 52.8 bits (125), Expect = 2e-09
 Identities = 7/58 (12%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPP 137
            +L++G  +   I + +A+   + G  +++      R    +Q + +    +   +  
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRLPAKAPLLEL 62

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 52.6 bits (125), Expect = 2e-09
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121
           ++I+G   GIG A  K    AG  ++        V + +
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADL 42

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 52.2 bits (124), Expect = 3e-09
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 10/92 (10%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPS- 138
            +L+TG  S   I Y +A+   + G  +    ++ +++   V+    + G   V      
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQCDVA 65

Query: 139 ------RLVSAPYNIIYKYSWLLVNIYVPSCF 164
                  + +    +  K+   + +I      
Sbjct: 66  EDASIDTMFAELGKVWPKFDGFVHSIGFAPGD 97

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVWVP 136
           VL+TG+  G+G A A  F + G  V++     +     +  SA   + EE   +     
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.7 bits (123), Expect = 4e-09
 Identities = 10/71 (14%), Positives = 16/71 (22%), Gaps = 17/71 (23%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----------------VDSAVQSL 124
            VL+ G    +G    + F      V                           D     +
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEV 63

Query: 125 REEFGEQHVWV 135
            +  G+Q V  
Sbjct: 64  GKLLGDQKVDA 74

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 51.0 bits (121), Expect = 7e-09
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118
            L+TG   G+G A A      G  V++     E  D
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGED 39

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 2e-08
 Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 6/59 (10%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSA------ERVDSAVQSLREEFGEQHVWV 135
           VLITG + GIG  LA               +        R+  A ++L    G      
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 47.6 bits (111), Expect = 1e-07
 Identities = 11/53 (20%), Positives = 16/53 (30%), Gaps = 2/53 (3%)

Query: 83  VLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
             I G   T G G+ +AKE  K    +I                  +F    +
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMI 57

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.4 bits (109), Expect = 3e-07
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 82  NVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVW 134
             L+ G  + + +G+A+A +  +AG  V +  ++ ER+    + L E  G   ++
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA-ERLRPEAEKLAEALGGALLF 63

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 42.5 bits (98), Expect = 8e-06
 Identities = 10/53 (18%), Positives = 17/53 (32%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           VLI G T  IG  +    +  G    +  R     +     +   F +    +
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 58

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.3 bits (95), Expect = 2e-05
 Identities = 10/53 (18%), Positives = 25/53 (47%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
           VL+TG+   +   + ++ L+ G  V   +RSA ++ +  +    ++  +    
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (94), Expect = 2e-05
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116
            + I G+T   G     + ++AG  V +  R + R
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 40.8 bits (94), Expect = 3e-05
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119
            + + G+T   G +L +     G +V     S + + +
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA 42

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 39.4 bits (90), Expect = 8e-05
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE 127
           +L+ G+T  IG  +AK  L  G    +  R +    ++ ++   E
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLE 50

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 20/52 (38%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHV 133
            V +TG T   G  L+      G  V   S +A  V S  ++ R   G Q  
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSE 61

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 38.3 bits (88), Expect = 2e-04
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 3/80 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---RVDSAVQSLREEFGEQHVWVPPSR 139
           V I G    +G A+ ++  + GD  ++     E       AV           V++  ++
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAK 64

Query: 140 LVSAPYNIIYKYSWLLVNIY 159
           +     N  Y   ++  N+ 
Sbjct: 65  VGGIVANNTYPADFIYQNMM 84

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.5 bits (85), Expect = 4e-04
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII--CSRSAERVDSAVQSLREEFGEQHVW 134
           VL+TG++   G  + K+  +  D  +     RSA+  +          G+    
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDA 59

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 36.9 bits (84), Expect = 7e-04
 Identities = 14/54 (25%), Positives = 23/54 (42%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWV 135
            VL+TG +  IG     + L+ G +VII         S +  +    G+   +V
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV 55

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.5 bits (83), Expect = 9e-04
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 71  SVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE 130
            +++E    P   LITG    IG  L +  LK    V+     A      +  +R    E
Sbjct: 7   ELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE 66

Query: 131 QH 132
           + 
Sbjct: 67  KQ 68

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 36.0 bits (81), Expect = 0.001
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
            +LITG+   +G  + K+       VI     
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 11/31 (35%), Positives = 12/31 (38%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSR 112
             LITG T   G  L +  L  G  V    R
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIR 33

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            L+TG T   G  LAK  L+ G  V     
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVA 32

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 34.9 bits (78), Expect = 0.003
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115
           N+L+ G T  +G+ L +     G+ + +   S E
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVIICSR 112
            LITG T   G  LA+  L+ G  V    R
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 34.7 bits (79), Expect = 0.003
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIIC------SRSAERVDSAVQSLREEF 128
            +LITG    IG A+ +  +K   + ++       + + E +    +S R  F
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNF 54

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 34.5 bits (77), Expect = 0.003
 Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF 128
            VLI G    IG  L +  L+     V      ++ +   +      F
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHF 49

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 34.4 bits (77), Expect = 0.003
 Identities = 8/84 (9%), Positives = 21/84 (25%)

Query: 80  PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSR 139
           P  VL+ G+T   G  L    L       + + + + +    +          +      
Sbjct: 2   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG 61

Query: 140 LVSAPYNIIYKYSWLLVNIYVPSC 163
            +   +  +        +      
Sbjct: 62  SIDTAFCCLGTTIKEAGSEEAFRA 85

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.5 bits (78), Expect = 0.004
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 82  NVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113
            + ITG+   I   +A+     G  VI     
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDWK 48

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 34.3 bits (77), Expect = 0.004
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 83  VLITGSTKGIGYALAKEFLKAGDNVII 109
           +LITG    +G  LA   L  G ++I+
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIV 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	167
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.74
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.72
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.71
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.7
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.7
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.7
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.69
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.69
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.69
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.68
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.67
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.67
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.67
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.67
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.67
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.67
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.66
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.66
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.65
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.65
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.65
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.65
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.65
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.64
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.63
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.63
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.63
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.63
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.63
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.63
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.63
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.62
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.61
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.61
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.61
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.6
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.6
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.6
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.59
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.58
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.56
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.56
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.56
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.53
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.53
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.52
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.48
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.48
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.47
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.47
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.45
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.43
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.43
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.42
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.37
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.34
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.34
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.32
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.32
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.3
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.21
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.1
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.06
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.04
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.01
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.96
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.93
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.87
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.86
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.85
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.85
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.82
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.8
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.73
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.73
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.72
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.68
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.68
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.66
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.66
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.65
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.57
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.55
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.47
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.43
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.42
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.39
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.38
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.33
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.18
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.16
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.06
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	97.99
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.94
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	97.88
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.86
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.83
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.74
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.7
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.65
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.64
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.63
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.56
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.56
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.44
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.37
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.36
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.3
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.25
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.22
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.14
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.12
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.12
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.08
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.06
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.99
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.93
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.89
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.86
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.85
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.83
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.82
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.81
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.81
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.77
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.76
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.74
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.73
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.73
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.7
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.7
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.65
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.65
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.63
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.63
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.61
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.57
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.56
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.54
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.52
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.47
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.46
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.38
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.38
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.33
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.33
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.21
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.19
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.17
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.15
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.14
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.09
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.04
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.03
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.01
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.0
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.99
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.98
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.9
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.88
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.86
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.83
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.72
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.62
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.61
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.6
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.53
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.52
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.45
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.41
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.37
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.36
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.33
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.31
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.29
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.13
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.1
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.04
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.01
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.99
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.98
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.98
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.94
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	94.84
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.8
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.76
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.74
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.73
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.7
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	94.64
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.58
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.56
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.51
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.49
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.48
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.46
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	94.39
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.32
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.3
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.28
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	94.21
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.2
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.07
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.97
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.89
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.89
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.87
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.83
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.62
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	93.61
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	93.52
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	93.48
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.46
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.4
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.37
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	93.35
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.33
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.28
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.26
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.23
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.19
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	93.18
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.18
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	93.1
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	93.07
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.89
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	92.88
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.83
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	92.8
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	92.74
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	92.72
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.61
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.6
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.34
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.27
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.18
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	92.05
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.84
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.76
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.56
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.49
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.33
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.31
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	91.28
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.13
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	90.81
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.68
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.68
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.65
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.6
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	90.4
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	90.17
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.06
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.98
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	89.86
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	89.8
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.79
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.57
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	89.57
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	89.32
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.3
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.13
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.72
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	88.62
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.13
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	88.11
d1jzta_	243	Hypothetical protein YNL200c (YNU0_YEAST) {Baker's	87.89
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.89
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	87.86
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.7
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	87.56
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.25
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.17
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	87.08
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	86.27
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.15
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	86.02
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	85.92
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	85.69
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	85.65
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.86
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.84
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.72
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	84.41
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.39
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	84.13
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	84.09
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	84.08
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	83.79
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.77
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	83.76
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	83.19
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	83.03
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.74
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	82.58
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	82.46
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.19
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	81.95
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.79
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	81.36
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	81.25
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	80.8
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	80.63
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	80.43
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	80.42
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.2
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	80.13
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	80.11
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	80.04

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=8.5e-18  Score=130.80  Aligned_cols=89  Identities=16%  Similarity=0.122  Sum_probs=75.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      |.+|+||+++||||++|||+++|+.|+++|++|++++|++++++++.+++++.....++.++++|+++++ .+. +..  
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            5569999999999999999999999999999999999999999999999988765558999999999987 222 111  


Q ss_pred             ----cceEEEEeccCcc
Q 031009          151 ----YSWLLVNIYVPSC  163 (167)
Q Consensus       151 ----~~dilvN~ai~~~  163 (167)
                          .+|++||||-...
T Consensus        85 ~~~g~iD~lVnnAg~~~  101 (257)
T d1xg5a_          85 SQHSGVDICINNAGLAR  101 (257)
T ss_dssp             HHHCCCSEEEECCCCCC
T ss_pred             HhcCCCCEEEecccccC
Confidence                2899999995544

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.72  E-value=2e-17  Score=128.35  Aligned_cols=86  Identities=23%  Similarity=0.283  Sum_probs=73.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..+. ++.++++|++|++. +. +..   
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999999998877666 78899999999862 22 221   


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         .+|+|||||-..
T Consensus        80 ~~g~iDiLVnnAG~~   94 (251)
T d1vl8a_          80 KFGKLDTVVNAAGIN   94 (251)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence               289999998543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.71  E-value=4.9e-17  Score=128.01  Aligned_cols=92  Identities=13%  Similarity=0.204  Sum_probs=77.3

Q ss_pred             CCCCCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh
Q 031009           71 SVKREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY  149 (167)
Q Consensus        71 ~~~~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~  149 (167)
                      ...+.++|+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++....+. ++.++++|+++.+. +...
T Consensus        16 ~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~-~~~~~~~D~~~~~~v~~~~   94 (294)
T d1w6ua_          16 AMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMVQNTV   94 (294)
T ss_dssp             CCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCC-ceEEEEecccChHHHHHHh
Confidence            344556899999999999999999999999999999999999999999999999887766 78899999999872 2211


Q ss_pred             -c------cceEEEEeccCcc
Q 031009          150 -K------YSWLLVNIYVPSC  163 (167)
Q Consensus       150 -~------~~dilvN~ai~~~  163 (167)
                       .      .+|++|||+....
T Consensus        95 ~~~~~~~g~iDilvnnAg~~~  115 (294)
T d1w6ua_          95 SELIKVAGHPNIVINNAAGNF  115 (294)
T ss_dssp             HHHHHHTCSCSEEEECCCCCC
T ss_pred             hhhhhhccccchhhhhhhhcc
Confidence             1      1899999986544

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.70  E-value=3.7e-17  Score=127.24  Aligned_cols=84  Identities=18%  Similarity=0.152  Sum_probs=71.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~----  150 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|+++.+++..+++....+..++.++++|++|++. +.+ .+    
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999998988876555579999999999872 222 11    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|+|||||-
T Consensus        81 ~G~iDiLVnnAG   92 (258)
T d1iy8a_          81 FGRIDGFFNNAG   92 (258)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCCEEEECCc
Confidence              1899999984

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.70  E-value=2.8e-17  Score=127.84  Aligned_cols=87  Identities=21%  Similarity=0.227  Sum_probs=73.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~---  150 (167)
                      ++++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+..+. ++.++++|++|++ .+.+. +   
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999988888777666 7899999999987 22221 1   


Q ss_pred             ---cceEEEEeccCcc
Q 031009          151 ---YSWLLVNIYVPSC  163 (167)
Q Consensus       151 ---~~dilvN~ai~~~  163 (167)
                         .+|++||||-...
T Consensus        84 ~~g~iDilVnnAg~~~   99 (260)
T d1h5qa_          84 DLGPISGLIANAGVSV   99 (260)
T ss_dssp             HSCSEEEEEECCCCCC
T ss_pred             HhCCCcEecccccccc
Confidence               2899999985443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.70  E-value=5.5e-17  Score=126.26  Aligned_cols=87  Identities=25%  Similarity=0.357  Sum_probs=72.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-h-hh----
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-N-II----  148 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~-~~----  148 (167)
                      +++|+||+++||||++|||++++++|+++|++|++++|++++++++.+++... +. ++.++++|++|++. + .+    
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~-~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GF-KVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-CceEEEeeCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999998765 33 68889999999762 1 11    


Q ss_pred             hc---cceEEEEeccCcc
Q 031009          149 YK---YSWLLVNIYVPSC  163 (167)
Q Consensus       149 ~~---~~dilvN~ai~~~  163 (167)
                      .+   .+|++||||-...
T Consensus        81 ~~~~~~idilvnnAG~~~   98 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVI   98 (259)
T ss_dssp             HHTTTCCCEEEECCCCCC
T ss_pred             HHhCCCceEEEECCceec
Confidence            11   2799999985433

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.69  E-value=6.2e-17  Score=125.45  Aligned_cols=89  Identities=24%  Similarity=0.152  Sum_probs=74.2

Q ss_pred             CCCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc-
Q 031009           74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK-  150 (167)
Q Consensus        74 ~~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~-  150 (167)
                      ..+.|++|+++||||++|||++++++|+++|++|++++|+++.++++.+++++. +. ++.++++|++|++ .+.+ .. 
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~-g~-~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GY-ESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999999999765 33 5899999999987 2222 21 


Q ss_pred             -----cceEEEEeccCccc
Q 031009          151 -----YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 -----~~dilvN~ai~~~~  164 (167)
                           .+|++||||.....
T Consensus        82 ~~~~g~iDilvnnag~~~~  100 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITRD  100 (251)
T ss_dssp             HHHCSCCCEEEECCCCCCC
T ss_pred             HHhcCCceeeeeccccccc
Confidence                 28999999865443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.2e-16  Score=123.48  Aligned_cols=87  Identities=21%  Similarity=0.128  Sum_probs=73.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc----
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK----  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~----  150 (167)
                      .++.||+++||||++|||++++++|+++|++|++++|++++++++.+++.+. +. ++.++.+|++|.+. ....+    
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~-~~-~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GA-KVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4699999999999999999999999999999999999999999999999765 33 69999999999872 22211    


Q ss_pred             ---cceEEEEeccCccc
Q 031009          151 ---YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 ---~~dilvN~ai~~~~  164 (167)
                         .+|++||||-....
T Consensus        81 ~~g~idilinnag~~~~   97 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYT   97 (244)
T ss_dssp             HTCCCSEEEECCCCCCC
T ss_pred             HcCCCceeEeecccccc
Confidence               18999999865443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=6.7e-17  Score=125.58  Aligned_cols=84  Identities=23%  Similarity=0.252  Sum_probs=71.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~---  150 (167)
                      +.|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++++..+  ++.++++|++|++. +.+ ..   
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~--~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999987543  58899999999862 221 11   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        85 ~~g~iDilvnnAG~   98 (255)
T d1fmca_          85 KLGKVDILVNNAGG   98 (255)
T ss_dssp             HHSSCCEEEECCCC
T ss_pred             HcCCCCEeeeCCcC
Confidence               28999999843

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.68  E-value=1e-16  Score=124.56  Aligned_cols=85  Identities=22%  Similarity=0.268  Sum_probs=70.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +|+||+++||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+..+. ++.++++|++|.+ .+. +.+   
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999997 46677888888777665 7999999999987 222 222   


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         .+|+|||||-..
T Consensus        80 ~~G~iDiLVnnAG~~   94 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQ   94 (260)
T ss_dssp             HHSCCSEEEECCCCC
T ss_pred             HhCCCcEEEeecccc
Confidence               189999998543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=1.2e-16  Score=125.03  Aligned_cols=86  Identities=30%  Similarity=0.319  Sum_probs=71.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-CceEEEEeccCCChh-hhh-hhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWVPPSRLVSAP-YNI-IYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~-~~~-~~~--  150 (167)
                      ++|+||+++||||++|||++++++|+++|++|++++|++++++++.+++.+... ..++.++++|++|++ .+. +..  
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            369999999999999999999999999999999999999999999999876532 236899999999987 222 221  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++||||-.
T Consensus        81 ~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCceEEEeCCcc
Confidence                18999999743

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=1.8e-16  Score=123.43  Aligned_cols=85  Identities=24%  Similarity=0.246  Sum_probs=71.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-h----
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-I----  148 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~----  148 (167)
                      .++|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++....+  ++.++.+|+++++. +. +    
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEeccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999876543  59999999999762 11 1    


Q ss_pred             h---ccceEEEEeccC
Q 031009          149 Y---KYSWLLVNIYVP  161 (167)
Q Consensus       149 ~---~~~dilvN~ai~  161 (167)
                      .   ..+|++||||-.
T Consensus        81 ~~~~g~idilvnnAG~   96 (259)
T d1xq1a_          81 SMFGGKLDILINNLGA   96 (259)
T ss_dssp             HHHTTCCSEEEEECCC
T ss_pred             HHhCCCcccccccccc
Confidence            1   127999999743

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.67  E-value=1.2e-16  Score=124.37  Aligned_cols=82  Identities=21%  Similarity=0.163  Sum_probs=69.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      .|+||+++||||++|||+++++.|+++|++|++++|+++.++++.+++++. +. ++.++++|++|++ .+. +..    
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-g~-~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GV-EARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999988765 33 5889999999976 222 211    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||||-
T Consensus        80 ~g~iDilVnnaG   91 (260)
T d1zema1          80 FGKIDFLFNNAG   91 (260)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCCCeehhhhc
Confidence              1899999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.7e-16  Score=124.65  Aligned_cols=88  Identities=30%  Similarity=0.355  Sum_probs=73.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC---CceEEEEeccCCChhh-hh-hhc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG---EQHVWVPPSRLVSAPY-NI-IYK  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~d~~~-~~-~~~  150 (167)
                      .+|+||+++||||++|||++++++|+++|++|++++|+.+++++..+++.....   ..++.++++|++|++. +. +..
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999999999999999999976432   2378999999999872 22 221


Q ss_pred             ------cceEEEEeccCcc
Q 031009          151 ------YSWLLVNIYVPSC  163 (167)
Q Consensus       151 ------~~dilvN~ai~~~  163 (167)
                            .+|+|||||-...
T Consensus        88 ~~~~~G~iDiLVnnAg~~~  106 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQF  106 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHhCCeEEEEeeccccc
Confidence                  2899999985443

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.67  E-value=3.2e-16  Score=121.88  Aligned_cols=85  Identities=29%  Similarity=0.325  Sum_probs=71.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-----h
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-----Y  149 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-----~  149 (167)
                      ++|+||+++||||++|||++++++|+++|++|++++|++++++++.+++.+.. . +++++.+|+++.+. +.+     .
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~-~-~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-L-NVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-C-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-C-CceEEEeecCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999988887654 3 58889999999872 111     1


Q ss_pred             c---cceEEEEeccCc
Q 031009          150 K---YSWLLVNIYVPS  162 (167)
Q Consensus       150 ~---~~dilvN~ai~~  162 (167)
                      +   .+|+++|||-..
T Consensus        80 ~~~g~idilinnag~~   95 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVV   95 (258)
T ss_dssp             HTTSCCCEEEECCCCC
T ss_pred             HhCCCcEEEecccccc
Confidence            1   278999988543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.67  E-value=1.4e-16  Score=124.17  Aligned_cols=84  Identities=29%  Similarity=0.273  Sum_probs=71.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC-CceEEEEeccCCChh-hhh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|++++++++.+++.+... ..++.++++|++|++ .+. +..   
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999987643 236899999999987 222 221   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|++||||-
T Consensus        82 ~~g~iDilvnnAG   94 (264)
T d1spxa_          82 KFGKLDILVNNAG   94 (264)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HhCCCCEeecccc
Confidence               2899999974

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.1e-16  Score=124.15  Aligned_cols=85  Identities=24%  Similarity=0.262  Sum_probs=71.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c-----
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K-----  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~-----  150 (167)
                      ..||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+..+..++.++++|++|++ .+.+. .     
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            3699999999999999999999999999999999999999999888876554447999999999986 22221 1     


Q ss_pred             -cceEEEEeccCc
Q 031009          151 -YSWLLVNIYVPS  162 (167)
Q Consensus       151 -~~dilvN~ai~~  162 (167)
                       .+|+|||||-..
T Consensus        81 G~iDilVnnAg~~   93 (254)
T d2gdza1          81 GRLDILVNNAGVN   93 (254)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCcCeeccccccc
Confidence             189999998554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.66  E-value=2.4e-16  Score=122.25  Aligned_cols=81  Identities=28%  Similarity=0.376  Sum_probs=68.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc------
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK------  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~------  150 (167)
                      .||+++||||++|||+++|++|+++|++|++++|+++.++++.+++++. +. ++.++++|++|++ .+. +.+      
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~-g~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GV-EADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999999999999999999765 33 6899999999987 222 221      


Q ss_pred             cceEEEEeccC
Q 031009          151 YSWLLVNIYVP  161 (167)
Q Consensus       151 ~~dilvN~ai~  161 (167)
                      .+|+|||||-.
T Consensus        79 ~iDilVnnAG~   89 (257)
T d2rhca1          79 PVDVLVNNAGR   89 (257)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            18999999843

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.65  E-value=2.4e-16  Score=122.33  Aligned_cols=83  Identities=23%  Similarity=0.261  Sum_probs=68.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      +.|+||+++||||++|||+++++.|+++|++|++++|++++++++.+++    +. ++.++++|++|++. +. +.+   
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~-~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GP-AACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CT-TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999999888777766    33 58899999999872 22 222   


Q ss_pred             ---cceEEEEeccCcc
Q 031009          151 ---YSWLLVNIYVPSC  163 (167)
Q Consensus       151 ---~~dilvN~ai~~~  163 (167)
                         .+|++||||-...
T Consensus        76 ~~g~iDilVnnAg~~~   91 (256)
T d1k2wa_          76 RWGSIDILVNNAALFD   91 (256)
T ss_dssp             HHSCCCEEEECCCCCC
T ss_pred             HhCCccEEEeeccccc
Confidence               2899999986443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.65  E-value=4.1e-16  Score=122.14  Aligned_cols=85  Identities=26%  Similarity=0.277  Sum_probs=71.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCC-ceEEEEeccCCChh-hhh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE-QHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.... .++.++++|++|++ .+. +.+   
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999999876432 36899999999986 222 221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        81 ~~G~iDilVnnAG~   94 (274)
T d1xhla_          81 KFGKIDILVNNAGA   94 (274)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCceEEEeeccc
Confidence               27999999753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.65  E-value=2.5e-16  Score=122.02  Aligned_cols=85  Identities=24%  Similarity=0.249  Sum_probs=70.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|+++.++++.+++..  +. ++.++++|++|++ .+. +..    
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PD-QIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TT-TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999888887743  22 6889999999987 222 221    


Q ss_pred             --cceEEEEeccCccc
Q 031009          151 --YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 --~~dilvN~ai~~~~  164 (167)
                        .+|+|||||.....
T Consensus        80 ~G~iDiLVnnAg~~~~   95 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVN   95 (251)
T ss_dssp             HSSCCEEEECCCCCCC
T ss_pred             hCCceEEEeccccccc
Confidence              18999999965543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=3.1e-16  Score=120.99  Aligned_cols=83  Identities=20%  Similarity=0.128  Sum_probs=68.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      +|+||+++||||++|||+++++.|+++|++|++++|+++.++++.+++.    . +...+++|++|++ .+. +.+    
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----A-NGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----G-GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----C-CCcEEEEEecCHHHhhhhhhhhhcc
Confidence            5899999999999999999999999999999999999999888777763    2 5788999999976 222 221    


Q ss_pred             --cceEEEEeccCccc
Q 031009          151 --YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 --~~dilvN~ai~~~~  164 (167)
                        .+|++||||.....
T Consensus        76 ~g~iDilVnnAg~~~~   91 (243)
T d1q7ba_          76 FGEVDILVNNAGITRD   91 (243)
T ss_dssp             TCSCSEEEECCCCCCC
T ss_pred             cCCcceehhhhhhccc
Confidence              28999999865443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.65  E-value=3.7e-16  Score=120.72  Aligned_cols=84  Identities=14%  Similarity=0.135  Sum_probs=68.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      ..|+||+++||||++|||+++++.|+++|++|++++|++++++++.+++.    . ++.++++|++|++. +. +.+   
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----D-AARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----G-GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----C-cceEEEeecCCHHHHHHHHHHHHH
Confidence            46999999999999999999999999999999999999998887777663    2 57889999999872 22 221   


Q ss_pred             ---cceEEEEeccCccc
Q 031009          151 ---YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 ---~~dilvN~ai~~~~  164 (167)
                         .+|++||||-....
T Consensus        77 ~~g~idilinnAG~~~~   93 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNI   93 (244)
T ss_dssp             HHSCCCEEEECCCCCCC
T ss_pred             HhCCCeEEEECCcccCC
Confidence               18999999855443

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=4.4e-16  Score=120.09  Aligned_cols=83  Identities=25%  Similarity=0.224  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhcc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYKY--  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~~--  151 (167)
                      +.|+||+++||||++|||++++++|+++|++|++++|++++++++.+++    +  .+..+.+|++|++ . +.+.++  
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~--~~~~~~~Dv~d~~~v~~~~~~~g~   76 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALGSVGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----C--CCeEEEEeCCCHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999999998887766654    2  3677889999987 2 233332  


Q ss_pred             ceEEEEeccCccc
Q 031009          152 SWLLVNIYVPSCF  164 (167)
Q Consensus       152 ~dilvN~ai~~~~  164 (167)
                      +|++||||-....
T Consensus        77 iDilVnnAg~~~~   89 (244)
T d1pr9a_          77 VDLLVNNAAVALL   89 (244)
T ss_dssp             CCEEEECCCCCCC
T ss_pred             ceEEEeccccccc
Confidence            8999999855443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=5.6e-16  Score=119.42  Aligned_cols=81  Identities=21%  Similarity=0.142  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhcc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYKY--  151 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~~--  151 (167)
                      ++|+||+++||||++|||++++++|+++|++|++++|++++++++.+++    +  .+.++.+|++|++  ++.+.++  
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~--~~~~~~~Dv~~~~~v~~~~~~~g~   74 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----P--GIEPVCVDLGDWDATEKALGGIGP   74 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----C--CCeEEEEeCCCHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999999999998877665554    2  3677889999987  2233333  


Q ss_pred             ceEEEEeccCc
Q 031009          152 SWLLVNIYVPS  162 (167)
Q Consensus       152 ~dilvN~ai~~  162 (167)
                      +|+|||||-..
T Consensus        75 iDilVnnAg~~   85 (242)
T d1cyda_          75 VDLLVNNAALV   85 (242)
T ss_dssp             CSEEEECCCCC
T ss_pred             CeEEEECCccc
Confidence            89999998543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.63  E-value=4.2e-16  Score=121.08  Aligned_cols=82  Identities=22%  Similarity=0.225  Sum_probs=67.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|+++++++..+++    +. ++.++++|+++++ .+. +.+    
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GD-AARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GG-GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-ceEEEEcccCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999998887776665    22 5889999999986 222 211    


Q ss_pred             --cceEEEEeccCcc
Q 031009          151 --YSWLLVNIYVPSC  163 (167)
Q Consensus       151 --~~dilvN~ai~~~  163 (167)
                        .+|++||||-...
T Consensus        77 ~g~iDilVnnAg~~~   91 (254)
T d1hdca_          77 FGSVDGLVNNAGIST   91 (254)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCccEEEecCcccc
Confidence              2899999985543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.2e-15  Score=118.85  Aligned_cols=86  Identities=22%  Similarity=0.282  Sum_probs=71.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~-----  150 (167)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++....+. .+..+.+|+.+... .....     
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-SAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS-EEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcc-cchhhhhhhhhHHHHHHHHHHHHHH
Confidence            599999999999999999999999999999999999999999998888777565 78899999998752 22111     


Q ss_pred             --cceEEEEeccCcc
Q 031009          151 --YSWLLVNIYVPSC  163 (167)
Q Consensus       151 --~~dilvN~ai~~~  163 (167)
                        .+|+++|||....
T Consensus        90 ~g~~~~li~nag~~~  104 (269)
T d1xu9a_          90 MGGLDMLILNHITNT  104 (269)
T ss_dssp             HTSCSEEEECCCCCC
T ss_pred             hCCcccccccccccc
Confidence              2788888876544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.63  E-value=4.1e-16  Score=121.63  Aligned_cols=81  Identities=16%  Similarity=0.182  Sum_probs=67.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~----  150 (167)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++... +  .+.++.+|++|++ .+.+. +    
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-D--VISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-T--TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-C--ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999888887532 2  4778899999986 22222 1    


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||||-
T Consensus        80 ~g~iD~lVnnAG   91 (268)
T d2bgka1          80 HGKLDIMFGNVG   91 (268)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCcceeccccc
Confidence              2899999884

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.63  E-value=8.8e-16  Score=119.58  Aligned_cols=84  Identities=20%  Similarity=0.240  Sum_probs=68.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK---  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~---  150 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|+.+ .++++.+++++. +. ++.++++|++|++ .+. +..   
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-g~-~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GG-EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            699999999999999999999999999999999999854 577777777654 44 6899999999986 222 221   


Q ss_pred             ---cceEEEEeccCc
Q 031009          151 ---YSWLLVNIYVPS  162 (167)
Q Consensus       151 ---~~dilvN~ai~~  162 (167)
                         .+|++||||-..
T Consensus        82 ~~G~iDiLVnnAG~~   96 (261)
T d1geea_          82 EFGKLDVMINNAGLE   96 (261)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCCCEeeccceec
Confidence               289999998543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.63  E-value=4.5e-16  Score=119.96  Aligned_cols=79  Identities=20%  Similarity=0.187  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      +.|+||+++||||++|||++++++|+++|++|++++|+++++++..+++       ...++++|++|++. +. +.+   
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999998887665543       35678999999872 22 211   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        74 ~~g~iDilVnnAG~   87 (242)
T d1ulsa_          74 HLGRLDGVVHYAGI   87 (242)
T ss_dssp             HHSSCCEEEECCCC
T ss_pred             hcCCceEEEECCcc
Confidence               18999999843

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.63  E-value=8.8e-16  Score=118.98  Aligned_cols=80  Identities=20%  Similarity=0.188  Sum_probs=67.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc------cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK------YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~------~~  152 (167)
                      |+++||||++|||+++|++|+++|++|++++|++++++++.+++++.++  ++.++++|++|++. +. +..      .+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            6789999999999999999999999999999999999999999976533  58899999999872 22 211      28


Q ss_pred             eEEEEeccCc
Q 031009          153 WLLVNIYVPS  162 (167)
Q Consensus       153 dilvN~ai~~  162 (167)
                      |+|||||--.
T Consensus        80 DilVnnAG~~   89 (255)
T d1gega_          80 DVIVNNAGVA   89 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEeccccc
Confidence            9999998443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=9.9e-16  Score=118.65  Aligned_cols=84  Identities=20%  Similarity=0.275  Sum_probs=71.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII----  148 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~---~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~----  148 (167)
                      .|+||+++||||++|||+++|++|++   +|++|++++|++++++++.+++....+..++.++++|+++++. +.+    
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            68999999999999999999999986   7999999999999999999999887665589999999999862 221    


Q ss_pred             hc-------cceEEEEecc
Q 031009          149 YK-------YSWLLVNIYV  160 (167)
Q Consensus       149 ~~-------~~dilvN~ai  160 (167)
                      .+       ..+++||||-
T Consensus        83 ~~~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCC
T ss_pred             HHhhhhccCceEEEEeccc
Confidence            11       2578888874

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.61  E-value=1.8e-15  Score=118.04  Aligned_cols=88  Identities=18%  Similarity=0.211  Sum_probs=69.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~--  150 (167)
                      .+|+||+++||||++|||++++++|+++|++|++++++ ++.++++.+++++. +. ++.++++|++|++ .. .+.+  
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GS-DAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh-CC-ceeeEeCCCCCHHHHHHHHHHHH
Confidence            36999999999999999999999999999999999877 45667777777665 33 6899999999976 22 2211  


Q ss_pred             ----cceEEEEeccCcccC
Q 031009          151 ----YSWLLVNIYVPSCFI  165 (167)
Q Consensus       151 ----~~dilvN~ai~~~~~  165 (167)
                          .+|++|||+......
T Consensus        92 ~~~g~idilV~nag~~~~~  110 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFG  110 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCC
T ss_pred             HHhCCCCccccccccchhh
Confidence                189999998665543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.61  E-value=1.6e-15  Score=117.57  Aligned_cols=81  Identities=21%  Similarity=0.242  Sum_probs=67.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK-----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~-----  150 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|+++.++++.+++    +. +..++++|++|++ .+.+.+     
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GE-RSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CT-TEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CC-CeEEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999888777665    33 5888999999976 222211     


Q ss_pred             --cceEEEEeccCc
Q 031009          151 --YSWLLVNIYVPS  162 (167)
Q Consensus       151 --~~dilvN~ai~~  162 (167)
                        .+|++||||-..
T Consensus        78 ~g~iDilVnnAG~~   91 (253)
T d1hxha_          78 LGTLNVLVNNAGIL   91 (253)
T ss_dssp             HCSCCEEEECCCCC
T ss_pred             hCCCCeEEeccccc
Confidence              189999998543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.2e-15  Score=118.21  Aligned_cols=79  Identities=19%  Similarity=0.245  Sum_probs=64.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~----  150 (167)
                      +|+||+++||||++|||+++++.|+++|++|++++|+++.++++.+++    +  ++.++++|++|++ .+.+ ..    
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~--~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P--GAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T--TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----C--CCeEEEccCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999998877665543    3  3788999999987 2222 11    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|++||||-.
T Consensus        77 ~g~iDilVnnAG~   89 (250)
T d1ydea1          77 FGRLDCVVNNAGH   89 (250)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEecccc
Confidence              18999999853

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.60  E-value=2.3e-15  Score=116.17  Aligned_cols=84  Identities=23%  Similarity=0.226  Sum_probs=64.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~----  150 (167)
                      +|+||+++||||++|||+++++.|+++|++|++++|++++.  ..+++++. +. ++.++++|++|++ .+.+. +    
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~-g~-~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL-GR-RVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT-TC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc-CC-cEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999987532  22334333 44 6899999999987 22221 1    


Q ss_pred             --cceEEEEeccCccc
Q 031009          151 --YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 --~~dilvN~ai~~~~  164 (167)
                        .+|++||||-....
T Consensus        78 ~G~iDilVnnAG~~~~   93 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPL   93 (247)
T ss_dssp             HSCCCEEEECCCCCCC
T ss_pred             cCCCCEEEECCCCCCC
Confidence              28999999865443

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.60  E-value=2.3e-15  Score=117.90  Aligned_cols=80  Identities=26%  Similarity=0.255  Sum_probs=65.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      |+|+||+++||||++|||++++++|+++|++|++++|++++++++.+++    +. ++..+.+|+++.+. +. +.+   
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~-~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GD-NVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-CeeEEecccccHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999998887665554    33 68999999999862 22 211   


Q ss_pred             ---cceEEEEecc
Q 031009          151 ---YSWLLVNIYV  160 (167)
Q Consensus       151 ---~~dilvN~ai  160 (167)
                         .+|++||||-
T Consensus        76 ~~g~idilvnnAG   88 (276)
T d1bdba_          76 RFGKIDTLIPNAG   88 (276)
T ss_dssp             HHSCCCEEECCCC
T ss_pred             HhCCccccccccc
Confidence               2899999984

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.60  E-value=1.8e-15  Score=116.41  Aligned_cols=81  Identities=17%  Similarity=0.231  Sum_probs=66.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhcc---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYKY---  151 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~~---  151 (167)
                      .|+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++    +. ++.++++|+++++ . +.+...   
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EA-EAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CS-SEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998877665544    33 6889999999987 2 222222   


Q ss_pred             ---ceEEEEeccCc
Q 031009          152 ---SWLLVNIYVPS  162 (167)
Q Consensus       152 ---~dilvN~ai~~  162 (167)
                         +|++||||-..
T Consensus        77 ~g~iDiLinnAg~~   90 (241)
T d2a4ka1          77 FGRLHGVAHFAGVA   90 (241)
T ss_dssp             HSCCCEEEEGGGGT
T ss_pred             hCCccEeccccccc
Confidence               89999998544

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.6e-15  Score=118.41  Aligned_cols=78  Identities=24%  Similarity=0.256  Sum_probs=65.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc-------c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK-------Y  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~-------~  151 (167)
                      ++++||||++|||+++|++|+++ |++|++.+|++++++++.+++++..+  ++.++++|++|.+. +.+.+       .
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            35699999999999999999986 89999999999999999999987644  47889999999872 22211       1


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      +|+|||||-
T Consensus        82 iDiLVnNAG   90 (275)
T d1wmaa1          82 LDVLVNNAG   90 (275)
T ss_dssp             EEEEEECCC
T ss_pred             cEEEEEcCC
Confidence            899999984

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.58  E-value=5.1e-15  Score=114.71  Aligned_cols=85  Identities=16%  Similarity=0.162  Sum_probs=67.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~~----  150 (167)
                      .|.||+++||||++|||++++++|+++|++|++.+ ++++.++++.+++++.++  +++++++|++|++. +...+    
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~--~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCC--CceEecCCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999865 555667788888866533  58999999999762 22111    


Q ss_pred             ---cceEEEEeccCcc
Q 031009          151 ---YSWLLVNIYVPSC  163 (167)
Q Consensus       151 ---~~dilvN~ai~~~  163 (167)
                         .+|++|||+-...
T Consensus        81 ~~g~idilinnag~~~   96 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEV   96 (259)
T ss_dssp             HHSCEEEEECCCCCCC
T ss_pred             HcCCCcEEEecccccc
Confidence               1899999986543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.56  E-value=5.2e-15  Score=114.64  Aligned_cols=85  Identities=15%  Similarity=0.103  Sum_probs=65.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCC-Chh-hhh-hhc--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLV-SAP-YNI-IYK--  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-d~~-~~~-~~~--  150 (167)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+.+..++. +++....+..++.++.+|++ +.+ .+. +.+  
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            369999999999999999999999999999999998877765544 55555555558999999998 433 211 221  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|+|||||-.
T Consensus        80 ~~~g~iDilvnnAG~   94 (254)
T d1sbya1          80 DQLKTVDILINGAGI   94 (254)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEeCCCC
Confidence                18999999853

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.56  E-value=5.4e-15  Score=109.86  Aligned_cols=83  Identities=16%  Similarity=0.228  Sum_probs=70.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccce
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSW  153 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~d  153 (167)
                      ..+++||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.....   +.+..+|++|.+ .+......|
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~iD   94 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK---VNVTAAETADDASRAEAVKGAH   94 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT---CCCEEEECCSHHHHHHHTTTCS
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccc---hhhhhhhcccHHHHHHHhcCcC
Confidence            4589999999999999999999999999999999999999999999888876543   456788999876 444555688


Q ss_pred             EEEEecc
Q 031009          154 LLVNIYV  160 (167)
Q Consensus       154 ilvN~ai  160 (167)
                      ++||||-
T Consensus        95 ilin~Ag  101 (191)
T d1luaa1          95 FVFTAGA  101 (191)
T ss_dssp             EEEECCC
T ss_pred             eeeecCc
Confidence            9999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.56  E-value=8.9e-15  Score=112.98  Aligned_cols=77  Identities=25%  Similarity=0.326  Sum_probs=59.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK----  150 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~----  150 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|+++..+ ..+++    +   ..++++|++|++ .+. +.+    
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~----~---~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI----G---GAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH----T---CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc----C---CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999976532 22322    3   356789999986 222 221    


Q ss_pred             --cceEEEEeccC
Q 031009          151 --YSWLLVNIYVP  161 (167)
Q Consensus       151 --~~dilvN~ai~  161 (167)
                        .+|+|||||-.
T Consensus        74 ~G~iDiLVnnAG~   86 (248)
T d2d1ya1          74 LGRVDVLVNNAAI   86 (248)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCeEEEeCcC
Confidence              18999999843

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.53  E-value=8.5e-15  Score=112.54  Aligned_cols=82  Identities=28%  Similarity=0.289  Sum_probs=67.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCe-------EEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDN-------VIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-  150 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~-------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-  150 (167)
                      ++++||||++|||++++++|+++|++       |++++|+++.++++.+++++. +. ++.++++|++|.+ .+. +.+ 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~-g~-~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GA-LTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TC-EEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999997       999999999999999988765 33 6899999999987 222 211 


Q ss_pred             -----cceEEEEeccCccc
Q 031009          151 -----YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 -----~~dilvN~ai~~~~  164 (167)
                           .+|++||||.....
T Consensus        80 ~~~~g~iDilvnnAg~~~~   98 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRF   98 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCC
T ss_pred             HHHcCCcceeecccccccC
Confidence                 18999999865443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.53  E-value=2.2e-14  Score=110.40  Aligned_cols=82  Identities=22%  Similarity=0.213  Sum_probs=65.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEe-CChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc------c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK------Y  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~------~  151 (167)
                      ++++||||++|||++++++|+++|++|++.+ |+++.++++.++++.. +. ++.++++|++|++ .+.+ ..      .
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GG-QAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4899999999999999999999999999875 5677788888888665 44 6889999999986 2222 21      2


Q ss_pred             ceEEEEeccCccc
Q 031009          152 SWLLVNIYVPSCF  164 (167)
Q Consensus       152 ~dilvN~ai~~~~  164 (167)
                      +|++||||-....
T Consensus        80 iDiLVnnAg~~~~   92 (244)
T d1edoa_          80 IDVVVNNAGITRD   92 (244)
T ss_dssp             CSEEEECCCCCCC
T ss_pred             CCccccccccccc
Confidence            8999999965443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.52  E-value=3.3e-14  Score=109.64  Aligned_cols=83  Identities=19%  Similarity=0.224  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhh-hc-
Q 031009           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NII-YK-  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~-~~-  150 (167)
                      .+|+||+++||||++  |||++++++|+++|++|++.+|+++..++. +++....+  +..++++|++|++. +.+ .. 
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALG--GALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTT--CCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccC--cccccccccCCHHHHHHHHHHH
Confidence            379999999999886  999999999999999999999987655443 44444434  36779999999862 222 11 


Q ss_pred             -----cceEEEEeccC
Q 031009          151 -----YSWLLVNIYVP  161 (167)
Q Consensus       151 -----~~dilvN~ai~  161 (167)
                           .+|++||||..
T Consensus        81 ~~~~g~iDilVnnag~   96 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAF   96 (256)
T ss_dssp             HHHHSSEEEEEECCCC
T ss_pred             HHhcCCceEEEecccc
Confidence                 18999999854

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.6e-14  Score=110.02  Aligned_cols=83  Identities=16%  Similarity=0.130  Sum_probs=63.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc--
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK--  150 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~--  150 (167)
                      |.+|+||+++||||++|||+++++.|+++|++|++++|+++++++..+    . .  .+....+|+.+.+ .+.. ..  
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----~-~--~~~~~~~d~~~~~~~~~~~~~~~   73 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----Y-P--GIQTRVLDVTKKKQIDQFANEVE   73 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----S-T--TEEEEECCTTCHHHHHHHHHHCS
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c-c--CCceeeeeccccccccccccccc
Confidence            346999999999999999999999999999999999999877655432    2 1  3677888888765 2222 12  


Q ss_pred             cceEEEEeccCccc
Q 031009          151 YSWLLVNIYVPSCF  164 (167)
Q Consensus       151 ~~dilvN~ai~~~~  164 (167)
                      .+|++|||+-....
T Consensus        74 ~id~lVn~ag~~~~   87 (245)
T d2ag5a1          74 RLDVLFNVAGFVHH   87 (245)
T ss_dssp             CCSEEEECCCCCCC
T ss_pred             cceeEEecccccCC
Confidence            28899999855443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.48  E-value=5.5e-14  Score=107.96  Aligned_cols=78  Identities=22%  Similarity=0.338  Sum_probs=61.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH---HCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhh-----
Q 031009           80 PYNVLITGSTKGIGYALAKEFL---KAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIY-----  149 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~---~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~-----  149 (167)
                      +|+|+||||++|||+++|++|+   ++|++|++.+|++++++++. ++.+..+  ++.++++|++|.+ .+ .+.     
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHS--NIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCT--TEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcCC--cEEEEEEEeccHHHHHHHHhhhHHH
Confidence            6899999999999999999997   47899999999999887764 4444433  5899999999976 21 111     


Q ss_pred             -c--cceEEEEecc
Q 031009          150 -K--YSWLLVNIYV  160 (167)
Q Consensus       150 -~--~~dilvN~ai  160 (167)
                       +  .+|++||||-
T Consensus        79 ~~~~~iDiLvnNAg   92 (248)
T d1snya_          79 TKDQGLNVLFNNAG   92 (248)
T ss_dssp             HGGGCCSEEEECCC
T ss_pred             hhcCCcceEEeecc
Confidence             1  2789999874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.47  E-value=2.9e-14  Score=109.40  Aligned_cols=73  Identities=21%  Similarity=0.268  Sum_probs=59.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK---  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~---  150 (167)
                      +.|+||+++||||++|||++++++|+++|++|++++|+++..+             ++..+++|++|++. +. +.+   
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-------------CceEEEEecCCHHHHHHHHHHHHH
Confidence            4699999999999999999999999999999999999875422             36779999999872 22 221   


Q ss_pred             ---cceEEEEeccC
Q 031009          151 ---YSWLLVNIYVP  161 (167)
Q Consensus       151 ---~~dilvN~ai~  161 (167)
                         .+|++||||-.
T Consensus        70 ~~g~iDiLVnnAG~   83 (237)
T d1uzma1          70 HQGPVEVLVSNAGL   83 (237)
T ss_dssp             HHSSCSEEEEECSC
T ss_pred             hcCCceEEEeeecc
Confidence               18999999853

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.47  E-value=5.9e-14  Score=107.20  Aligned_cols=72  Identities=25%  Similarity=0.280  Sum_probs=57.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhcc--ceEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKY--SWLL  155 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~--~dil  155 (167)
                      |+||+++||||++|||++++++|+++|++|++++|+++.+++       . +   ..++.+|+++.......+.  +|++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~-~---~~~~~~Dv~~~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S-G---HRYVVCDLRKDLDLLFEKVKEVDIL   70 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T-C---SEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c-C---CcEEEcchHHHHHHHHHHhCCCcEE
Confidence            789999999999999999999999999999999999765432       1 2   3457899987644433333  8999


Q ss_pred             EEecc
Q 031009          156 VNIYV  160 (167)
Q Consensus       156 vN~ai  160 (167)
                      ||||-
T Consensus        71 VnnAG   75 (234)
T d1o5ia_          71 VLNAG   75 (234)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99884

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.45  E-value=6.8e-14  Score=107.58  Aligned_cols=78  Identities=23%  Similarity=0.368  Sum_probs=60.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh----hc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII----YK  150 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~----~~  150 (167)
                      |+.|+|+||||++|||++++++|+++|+  +|++.+|+.++++++    .+..+. ++.++++|++|.+ .+.+    .+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l----~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSIKDS-RVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTCCCT-TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH----HHhhCC-ceEEEEEecCCHHHHHHHHHHHHH
Confidence            4569999999999999999999999996  688899999877654    333233 6899999999986 2111    11


Q ss_pred             -----cceEEEEecc
Q 031009          151 -----YSWLLVNIYV  160 (167)
Q Consensus       151 -----~~dilvN~ai  160 (167)
                           .+|++||||-
T Consensus        76 ~~~~~~idilinnAG   90 (250)
T d1yo6a1          76 IVGSDGLSLLINNAG   90 (250)
T ss_dssp             HHGGGCCCEEEECCC
T ss_pred             HhCCCCeEEEEEcCc
Confidence                 1789999974

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=2.7e-13  Score=107.38  Aligned_cols=81  Identities=21%  Similarity=0.181  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC---------hhHHHHHHHHHHHHhCCceEEEEeccCCChh--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS---------AERVDSAVQSLREEFGEQHVWVPPSRLVSAP--  144 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--  144 (167)
                      ++|+||+++||||++|||+++|++|+++|++|++.+++         .+.+++..+++....     ....+|++|.+  
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~   77 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-----GKAVANYDSVEAG   77 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-----CEEEEECCCGGGH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc-----cccccccchHHHH
Confidence            47999999999999999999999999999999998764         445667777775542     23455666644  


Q ss_pred             hhhhh----c--cceEEEEeccC
Q 031009          145 YNIIY----K--YSWLLVNIYVP  161 (167)
Q Consensus       145 ~~~~~----~--~~dilvN~ai~  161 (167)
                      ++.+.    +  .+|+|||||--
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi  100 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGI  100 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCcc
Confidence            11111    1  28999999843

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.4e-13  Score=102.61  Aligned_cols=63  Identities=19%  Similarity=0.368  Sum_probs=55.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +|+||+++||||++|||++++++|+++|++|++++|+++.+++..+++    +. ......+|+.+..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l----~~-~~~~~~~~~~~~~   64 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GN-NCVFAPADVTSEK   64 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CT-TEEEEECCTTCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CC-Ccccccccccccc
Confidence            689999999999999999999999999999999999999888777766    23 5778888998765

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.42  E-value=2.8e-13  Score=104.83  Aligned_cols=82  Identities=16%  Similarity=0.280  Sum_probs=62.4

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhh-c--
Q 031009           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIY-K--  150 (167)
Q Consensus        77 ~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~-~--  150 (167)
                      +|+||+++||||+|  |||+++|++|+++|++|++++|+++ +++.++++....+  ...+.++|+++.. ..... +  
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~--~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCC--ceeEeeecccchhhHHHHHHHHH
Confidence            68999999999765  9999999999999999999999854 4455667766644  3667899999876 22211 1  


Q ss_pred             ----cceEEEEeccC
Q 031009          151 ----YSWLLVNIYVP  161 (167)
Q Consensus       151 ----~~dilvN~ai~  161 (167)
                          .+|++|||+..
T Consensus        79 ~~~g~id~lV~nag~   93 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAF   93 (274)
T ss_dssp             HHTSCEEEEEECCCC
T ss_pred             HHcCCCCeEEeeccc
Confidence                17888877643

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.37  E-value=7.8e-13  Score=101.78  Aligned_cols=83  Identities=10%  Similarity=0.090  Sum_probs=62.3

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh----h
Q 031009           76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI----I  148 (167)
Q Consensus        76 ~~l~gk~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~----~  148 (167)
                      .+|+||+++|||+  ++|||+++|++|+++|++|++++|+.++..+   ++.+..+. +...+++|+++++ ...    +
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~~-~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLPA-KAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSSS-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcCC-ceeeEeeecccccccccccchh
Confidence            4799999999994  5799999999999999999999999876543   33333344 5778899999875 111    1


Q ss_pred             h------ccceEEEEeccCc
Q 031009          149 Y------KYSWLLVNIYVPS  162 (167)
Q Consensus       149 ~------~~~dilvN~ai~~  162 (167)
                      .      ..+|+++||+...
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFM   97 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCC
T ss_pred             hhccccCCCcceeeeccccc
Confidence            1      1178999998643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=2e-12  Score=99.12  Aligned_cols=84  Identities=13%  Similarity=0.204  Sum_probs=62.6

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh-c--
Q 031009           77 MLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY-K--  150 (167)
Q Consensus        77 ~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~-~--  150 (167)
                      .|+||+++||||++  |||+++|+.|+++|++|++.+|+++..+.. +++....+.  ......|+++... .... .  
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGS--DIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTC--CCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCC--cceeecccchHHHHHHHHHHhh
Confidence            58999999999998  899999999999999999999986654443 555444443  5667788887652 1111 1  


Q ss_pred             ----cceEEEEeccCcc
Q 031009          151 ----YSWLLVNIYVPSC  163 (167)
Q Consensus       151 ----~~dilvN~ai~~~  163 (167)
                          ..|++||++....
T Consensus        79 ~~~~~~d~~v~~a~~~~   95 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAP   95 (258)
T ss_dssp             TTCSSEEEEEECCCCCC
T ss_pred             hcccccceEEEeecccc
Confidence                1789999886544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.34  E-value=3.9e-12  Score=97.50  Aligned_cols=79  Identities=22%  Similarity=0.231  Sum_probs=60.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-HHHHHHHHHHHhCCceEEEEeccCCChh--hh---hh----h-
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWVPPSRLVSAP--YN---II----Y-  149 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~---~~----~-  149 (167)
                      .++|||||++|||++++++|+++|++|++++|+.++ .+++.+++....+. +..+.+.|+.+..  .+   .+    . 
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCC-ceEEEecccccchhHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998654 56777888777555 6777776665432  11   11    1 


Q ss_pred             --ccceEEEEecc
Q 031009          150 --KYSWLLVNIYV  160 (167)
Q Consensus       150 --~~~dilvN~ai  160 (167)
                        ..+|++||||-
T Consensus        81 ~~g~iDilvnnAG   93 (266)
T d1mxha_          81 AFGRCDVLVNNAS   93 (266)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HhCCCCEEEECCc
Confidence              12899999984

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=8.8e-13  Score=103.40  Aligned_cols=86  Identities=16%  Similarity=0.007  Sum_probs=59.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEE---EeCChhHHHHHHHHHHHHh-CCceEEEEeccCCChhh-h-hhh----
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVII---CSRSAERVDSAVQSLREEF-GEQHVWVPPSRLVSAPY-N-IIY----  149 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~---~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~d~~~-~-~~~----  149 (167)
                      .|+++||||++|||+++|+.|+++|++|+.   ..|+.+..+++.+..+... ...++.++.+|++|.+. . .+.    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            478999999999999999999999987554   4555554444333333211 12269999999999872 2 221    


Q ss_pred             ccceEEEEeccCcccC
Q 031009          150 KYSWLLVNIYVPSCFI  165 (167)
Q Consensus       150 ~~~dilvN~ai~~~~~  165 (167)
                      ..+|+++||+......
T Consensus        82 g~idilvnnag~~~~~   97 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLG   97 (285)
T ss_dssp             SCCSEEEECCCCCCCS
T ss_pred             cchhhhhhcccccccc
Confidence            2289999999665543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.32  E-value=5.2e-12  Score=97.75  Aligned_cols=58  Identities=17%  Similarity=0.218  Sum_probs=47.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC-hhHHHHHHHHHHHHhCCceEEEEecc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWVPPSR  139 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (167)
                      .+++||||++|||+++|++|+++|++|++.+++ ++..+++.+++....+. ....+++|
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d   61 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQAD   61 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEee
Confidence            489999999999999999999999999997764 56677778888776555 56666555

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.30  E-value=5.6e-12  Score=96.79  Aligned_cols=81  Identities=21%  Similarity=0.305  Sum_probs=61.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh---hHHHHHHHHHHHHhCCceEEEEeccCCChhh-hhhh-cc-
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---ERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NIIY-KY-  151 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~~~-~~-  151 (167)
                      ++++++||||++|||++++++|+++|+ +|++++|+.   +..++..++++.. +. ++.++.+|++|.+. ..+. .. 
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~-~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GA-RTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TC-EEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-cc-cccccccccchHHHHHHhhcccc
Confidence            456999999999999999999999998 588898874   3456666777554 44 79999999999872 2221 11 


Q ss_pred             ----ceEEEEeccC
Q 031009          152 ----SWLLVNIYVP  161 (167)
Q Consensus       152 ----~dilvN~ai~  161 (167)
                          ++.++||+..
T Consensus        86 ~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          86 DDVPLSAVFHAAAT   99 (259)
T ss_dssp             TTSCEEEEEECCCC
T ss_pred             cccccccccccccc
Confidence                6777887743

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.21  E-value=6.3e-12  Score=96.70  Aligned_cols=71  Identities=20%  Similarity=0.135  Sum_probs=53.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-h-hhhhc------cce
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-Y-NIIYK------YSW  153 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~-~~~~~------~~d  153 (167)
                      +++||||++|||+++|++|+++|++|++.+|+.+.++++.... ..       +.++|+++.+ . +.+.+      .+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-ET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-HH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-Cc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999999999999999988876654322 22       2456777654 1 11111      289


Q ss_pred             EEEEecc
Q 031009          154 LLVNIYV  160 (167)
Q Consensus       154 ilvN~ai  160 (167)
                      ++||||.
T Consensus        74 iLVnNAg   80 (252)
T d1zmta1          74 VLVSNDI   80 (252)
T ss_dssp             EEEEECC
T ss_pred             EEEECCc
Confidence            9999874

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.10  E-value=7.4e-11  Score=91.73  Aligned_cols=42  Identities=24%  Similarity=0.359  Sum_probs=37.8

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHCCCeEEEEeCChhHH
Q 031009           76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERV  117 (167)
Q Consensus        76 ~~l~gk~vlITGas~--GIG~aia~~L~~~G~~Vi~~~r~~~~~  117 (167)
                      ++|+||+++||||++  |||+++|++|+++|++|++.+|++...
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~   47 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALN   47 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhh
Confidence            479999999999875  999999999999999999999976543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.06  E-value=1.4e-10  Score=87.98  Aligned_cols=70  Identities=9%  Similarity=-0.053  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh-h----h---hc
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN-I----I---YK  150 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~-~----~---~~  150 (167)
                      +||+++||||++|||++++++|+++|++|+++++.+...            ........+|..+.+.. .    .   ..
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999876421            11455566666544311 1    1   11


Q ss_pred             --cceEEEEecc
Q 031009          151 --YSWLLVNIYV  160 (167)
Q Consensus       151 --~~dilvN~ai  160 (167)
                        .+|++||||-
T Consensus        69 ~~~iD~lInnAG   80 (236)
T d1dhra_          69 DQKVDAILCVAG   80 (236)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence              1689999874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.04  E-value=8.6e-10  Score=87.23  Aligned_cols=86  Identities=15%  Similarity=0.134  Sum_probs=64.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      -+||+|+||||+|.||..++++|+++|++|+++.|+.++..................++..|+.|.+ ...+....+.++
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            4589999999999999999999999999999999998776655444433333334566778999876 334445567777


Q ss_pred             EeccCcc
Q 031009          157 NIYVPSC  163 (167)
Q Consensus       157 N~ai~~~  163 (167)
                      |++....
T Consensus        89 ~~a~~~~   95 (342)
T d1y1pa1          89 HIASVVS   95 (342)
T ss_dssp             ECCCCCS
T ss_pred             hhccccc
Confidence            7776543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.01  E-value=3e-10  Score=86.37  Aligned_cols=36  Identities=25%  Similarity=0.322  Sum_probs=33.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +|+++||||++|||++++++|+++|++|++++|+++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            589999999999999999999999999999998753

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.00  E-value=1.2e-10  Score=88.27  Aligned_cols=68  Identities=15%  Similarity=0.066  Sum_probs=49.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhh--h------h--c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNI--I------Y--K  150 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~--~------~--~  150 (167)
                      ++|+||||++|||++++++|+++|++|++++|+++..           .. ......+|+.+.+...  .      .  .
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------AD-SNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------SS-EEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------cc-ccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            4579999999999999999999999999999986421           11 4555666776543111  1      1  1


Q ss_pred             cceEEEEecc
Q 031009          151 YSWLLVNIYV  160 (167)
Q Consensus       151 ~~dilvN~ai  160 (167)
                      .+|++||||-
T Consensus        71 ~iD~linnAG   80 (235)
T d1ooea_          71 QVDGVFCVAG   80 (235)
T ss_dssp             CEEEEEECCC
T ss_pred             CeeEEEECCc
Confidence            1799999884

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.96  E-value=6.2e-10  Score=83.67  Aligned_cols=51  Identities=20%  Similarity=0.281  Sum_probs=44.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .|+++||||++|||+++|++|+++|++|++++|+++.              .+....++|+++..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~   51 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREE   51 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchh
Confidence            4899999999999999999999999999999998642              14567888998765

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.93  E-value=1.6e-09  Score=86.84  Aligned_cols=80  Identities=13%  Similarity=0.075  Sum_probs=58.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh----------------hHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------------ERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      ||+|+||||+|.||.+++++|+++|++|+++|.-.                ....+....+....+. ++.++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK-SIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCC-CCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCC-CcEEEEccCCCH
Confidence            78999999999999999999999999999997311                1122233344444444 789999999998


Q ss_pred             h-hhhh-hc-cceEEEEecc
Q 031009          144 P-YNII-YK-YSWLLVNIYV  160 (167)
Q Consensus       144 ~-~~~~-~~-~~dilvN~ai  160 (167)
                      + ...+ .. ..|+++|.|.
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa   99 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGE   99 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHhhcchheecccc
Confidence            7 2333 23 2689999884

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=6.8e-10  Score=82.00  Aligned_cols=74  Identities=18%  Similarity=0.216  Sum_probs=58.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      |.+|+|+||||+|+||++++++|+++|++|.++.|+.+++...        ....+.++.+|++|.+ ...+.+..|+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~~~d~vi   72 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVAGQDAVI   72 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhcCCCEEE
Confidence            4578899999999999999999999999999999998764321        1225788999999987 344455567777


Q ss_pred             Eec
Q 031009          157 NIY  159 (167)
Q Consensus       157 N~a  159 (167)
                      ++.
T Consensus        73 ~~~   75 (205)
T d1hdoa_          73 VLL   75 (205)
T ss_dssp             ECC
T ss_pred             EEe
Confidence            765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.87  E-value=1e-09  Score=86.46  Aligned_cols=81  Identities=16%  Similarity=0.035  Sum_probs=60.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWL  154 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~di  154 (167)
                      +++|+|+||||+|.||..+++.|+++|++|++++|+........+...   ....+.++.+|++|.+ ...+.+  ..++
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~   82 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREFQPEI   82 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh---cccCCeEEEeeccChHhhhhhhhhchhhh
Confidence            689999999999999999999999999999999998765433322221   1225889999999977 222322  3677


Q ss_pred             EEEeccC
Q 031009          155 LVNIYVP  161 (167)
Q Consensus       155 lvN~ai~  161 (167)
                      +++.+..
T Consensus        83 v~~~aa~   89 (356)
T d1rkxa_          83 VFHMAAQ   89 (356)
T ss_dssp             EEECCSC
T ss_pred             hhhhhcc
Confidence            7777643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.86  E-value=2.1e-09  Score=84.87  Aligned_cols=80  Identities=16%  Similarity=0.159  Sum_probs=57.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cceEEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YSWLLVN  157 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~dilvN  157 (167)
                      |+||||||+|.||..++++|+++|++|+++++....-............. ++.++++|++|.+ ...+..  ..|+++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH-HIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTS-CCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhccc-CCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            78999999999999999999999999999986332211111222222233 6888999999987 333322  3899999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      .|..
T Consensus        81 lAa~   84 (347)
T d1z45a2          81 FAGL   84 (347)
T ss_dssp             CCSC
T ss_pred             cccc
Confidence            8754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=2.7e-09  Score=84.94  Aligned_cols=79  Identities=24%  Similarity=0.143  Sum_probs=53.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH-----HHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhc--cc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-----VDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYK--YS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~--~~  152 (167)
                      |++|||||+|.||..++++|++.|++|++++|....     ++....+...  ...++.++++|++|.+ .....+  ..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNLTRILREVQP   79 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCHHHHHHHHhccCC
Confidence            789999999999999999999999999999985432     2222222111  1226899999999977 333333  25


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |+++|.|..
T Consensus        80 d~v~h~aa~   88 (357)
T d1db3a_          80 DEVYNLGAM   88 (357)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEeecc
Confidence            899998754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=2.8e-09  Score=84.01  Aligned_cols=79  Identities=19%  Similarity=0.186  Sum_probs=56.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc-cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK-YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~-~~dilvN~  158 (167)
                      +|+||||+|.||..+++.|+++|++|++++|.....+.....++..... ++.++++|++|.+ .... .. ..|+++|.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK-HPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTS-CCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCC-CCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            4999999999999999999999999999987432222222222222233 6889999999987 3333 32 37999998


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |..
T Consensus        81 Aa~   83 (338)
T d1udca_          81 AGL   83 (338)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            854

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.82  E-value=3.4e-09  Score=83.99  Aligned_cols=42  Identities=24%  Similarity=0.241  Sum_probs=36.0

Q ss_pred             CCCEEEEeC--CCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           79 PPYNVLITG--STKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        79 ~gk~vlITG--as~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      .+|++||||  +++|||+++|++|+++|++|++.++........
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~   44 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFM   44 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHH
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhh
Confidence            379999999  558999999999999999999999887654443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.80  E-value=3.5e-09  Score=82.76  Aligned_cols=80  Identities=19%  Similarity=0.059  Sum_probs=55.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-----HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-h-ccc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-Y-KYS  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~-~~~  152 (167)
                      |++|||||+|.||..++++|+++|++|++++|...     ..+......... ....+.++.+|+++.+ .... . ...
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhhhcc
Confidence            78999999999999999999999999999998532     222221111111 2236889999999976 2222 2 236


Q ss_pred             eEEEEeccC
Q 031009          153 WLLVNIYVP  161 (167)
Q Consensus       153 dilvN~ai~  161 (167)
                      |+++|.|..
T Consensus        81 D~Vih~Aa~   89 (339)
T d1n7ha_          81 DEVYNLAAQ   89 (339)
T ss_dssp             SEEEECCSC
T ss_pred             chhhhcccc
Confidence            899998865

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.73  E-value=9.4e-09  Score=79.76  Aligned_cols=79  Identities=23%  Similarity=0.095  Sum_probs=55.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhh--hhhhc-cceEEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPY--NIIYK-YSWLLVN  157 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~--~~~~~-~~dilvN  157 (167)
                      |+||||||+|.||+.++++|+++|++|+.++|.......  ..+.......++.++.+|++|...  ..... ..+++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~   78 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   78 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH--HHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence            689999999999999999999999999999986532110  112222222368999999999762  22222 2566766


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      ++..
T Consensus        79 ~a~~   82 (321)
T d1rpna_          79 LAAQ   82 (321)
T ss_dssp             CCSC
T ss_pred             cccc
Confidence            6643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.3e-08  Score=80.06  Aligned_cols=79  Identities=18%  Similarity=0.170  Sum_probs=54.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC------hhHHHHHHHHHHHHhCCceEEEEeccCCChhh-hh-hhc-c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS------AERVDSAVQSLREEFGEQHVWVPPSRLVSAPY-NI-IYK-Y  151 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~-~~-~~~-~  151 (167)
                      |+||||||+|.||.+++++|+++|++|+++|+.      .....+..+.+...... ++.++.+|++|.+. .. ... .
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR-SVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCC-CcEEEEeeccccccccccccccc
Confidence            689999999999999999999999999998742      11111222323323333 78999999999862 22 222 2


Q ss_pred             ceEEEEecc
Q 031009          152 SWLLVNIYV  160 (167)
Q Consensus       152 ~dilvN~ai  160 (167)
                      .++++|.|-
T Consensus        82 ~~~i~h~Aa   90 (346)
T d1ek6a_          82 FMAVIHFAG   90 (346)
T ss_dssp             EEEEEECCS
T ss_pred             ccccccccc
Confidence            556777653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.72  E-value=1.9e-08  Score=77.94  Aligned_cols=78  Identities=15%  Similarity=0.096  Sum_probs=55.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhh-hc-cceEEEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNII-YK-YSWLLVN  157 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~-~~-~~dilvN  157 (167)
                      +||||||+|.||..++++|+++|++|+++++-.. ...+....+.   ...++.++.+|++|.+ ...+ .. ..|+++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~---~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS---SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh---ccCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            5899999999999999999999999999885322 1112222222   2236889999999976 2332 22 2699999


Q ss_pred             eccCc
Q 031009          158 IYVPS  162 (167)
Q Consensus       158 ~ai~~  162 (167)
                      .|...
T Consensus        79 ~aa~~   83 (338)
T d1orra_          79 LAGQV   83 (338)
T ss_dssp             CCCCC
T ss_pred             ecccc
Confidence            88654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=1.1e-08  Score=80.10  Aligned_cols=79  Identities=20%  Similarity=0.151  Sum_probs=50.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh-----HHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhcc-c
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-----RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYKY-S  152 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~~-~  152 (167)
                      |++|||||+|.||..++++|+++|++|+.++|...     .++........... .++.++.+|++|.+ ... .... .
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhcc-CCcEEEEeecCCchhhHHHHhhccc
Confidence            33499999999999999999999999999998542     22222222222212 26899999999977 222 2222 4


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      +++++.+.
T Consensus        81 ~~v~~~~a   88 (347)
T d1t2aa_          81 TEIYNLGA   88 (347)
T ss_dssp             SEEEECCS
T ss_pred             ceeeeeee
Confidence            55565553

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.68  E-value=1.7e-08  Score=77.18  Aligned_cols=78  Identities=18%  Similarity=0.056  Sum_probs=53.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH-HHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEEEe
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS-AVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLVNI  158 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilvN~  158 (167)
                      ++|+||||+|.||+.++++|+++|++|+++.|+...... ....+...... .+.++++|+.|.+ ........+.++++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~-~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-GAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTT-TCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccC-CcEEEEeecccchhhhhhccCcchhhhh
Confidence            359999999999999999999999999999997543211 11222222222 5888999999977 33333344555554


Q ss_pred             c
Q 031009          159 Y  159 (167)
Q Consensus       159 a  159 (167)
                      +
T Consensus        83 ~   83 (312)
T d1qyda_          83 L   83 (312)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.66  E-value=2.8e-08  Score=72.73  Aligned_cols=72  Identities=22%  Similarity=0.173  Sum_probs=53.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCe--EEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDN--VIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      .++|+||||+|+||++++++|+++|++  |+...|++++...    +    .. .+.++.+|+++.+ ...+.+..|.++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~----~~-~~~~~~~d~~~~~~~~~~~~~~d~vi   73 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I----GG-EADVFIGDITDADSINPAFQGIDALV   73 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T----TC-CTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c----cC-CcEEEEeeeccccccccccccceeeE
Confidence            468999999999999999999999965  5566787754321    1    22 5778899999987 444455567888


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      |++.
T Consensus        74 ~~a~   77 (252)
T d2q46a1          74 ILTS   77 (252)
T ss_dssp             ECCC
T ss_pred             EEEe
Confidence            8764

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.66  E-value=4.2e-08  Score=69.92  Aligned_cols=49  Identities=24%  Similarity=0.451  Sum_probs=43.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE  130 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~  130 (167)
                      ++.|+||+|++|+++|+.|+++|++|++++|++++++++.+++......
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~   50 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD   50 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence            4667788899999999999999999999999999999999999876554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.65  E-value=4.7e-08  Score=76.67  Aligned_cols=82  Identities=18%  Similarity=0.084  Sum_probs=55.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh----HHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccc
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE----RVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYS  152 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~  152 (167)
                      .+.|++|||||+|.||.+++++|.+.|++|+++||...    ..+............ ++.++.+|..|.. ........
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~~~~~~~~~   92 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS-NFKFIQGDIRNLDDCNNACAGV   92 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHT-TEEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccC-CeeEEeeccccccccccccccc
Confidence            45689999999999999999999999999999987322    222221111111112 5899999999977 33334445


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      +.+++.+.
T Consensus        93 ~~v~~~~a  100 (341)
T d1sb8a_          93 DYVLHQAA  100 (341)
T ss_dssp             SEEEECCS
T ss_pred             cccccccc
Confidence            55555553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.57  E-value=9.5e-08  Score=72.22  Aligned_cols=80  Identities=16%  Similarity=0.108  Sum_probs=55.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH--HHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD--SAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      .|+|+||||+|.||++++++|+++|++|++++|+.....  +....+...... .+.++.+|+.+.. ........+.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS-GANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTT-TCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccC-CcEEEEeecccchhhhhhhhhceeee
Confidence            467999999999999999999999999999998754321  112223222222 5778899999877 333444456666


Q ss_pred             Eecc
Q 031009          157 NIYV  160 (167)
Q Consensus       157 N~ai  160 (167)
                      +.+.
T Consensus        82 ~~~~   85 (307)
T d1qyca_          82 STVG   85 (307)
T ss_dssp             ECCC
T ss_pred             eccc
Confidence            6553

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.55  E-value=4.8e-08  Score=76.46  Aligned_cols=73  Identities=15%  Similarity=0.150  Sum_probs=55.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh--hhhhhccceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP--YNIIYKYSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~--~~~~~~~~dilvN~  158 (167)
                      +||||||+|.||..++++|+++| ++|+++++......+..       ...++.++.+|+++.+  .+...+..|+++|+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence            59999999999999999999999 58999988665432211       1236999999998764  33344558889998


Q ss_pred             ccC
Q 031009          159 YVP  161 (167)
Q Consensus       159 ai~  161 (167)
                      |..
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            854

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.47  E-value=2e-08  Score=79.08  Aligned_cols=80  Identities=15%  Similarity=0.133  Sum_probs=52.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEE--EeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVII--CSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      .|+||||||+|.||..++++|+++|+.|.+  .|.......  ...+....+ .++.++.+|++|.+ ...+....+.++
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~--~~~~~~~~~-~~i~~~~~Di~d~~~~~~~~~~~~~v~   78 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAILG-DRVELVVGDIADAELVDKLAAKADAIV   78 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGGCS-SSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc--HHHHHHhhc-CCeEEEEccCCCHHHHHHHHhhhhhhh
Confidence            578999999999999999999999976544  442111100  011111112 36899999999987 444455566677


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.|...
T Consensus        79 ~~a~~~   84 (346)
T d1oc2a_          79 HYAAES   84 (346)
T ss_dssp             ECCSCC
T ss_pred             hhhhcc
Confidence            776543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.43  E-value=3.5e-07  Score=71.80  Aligned_cols=61  Identities=16%  Similarity=0.155  Sum_probs=48.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +.|+|+||||+|.||.+++++|+++|++|+++.|+......  .++..   ...+.++++|+.|..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~   62 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNV   62 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcH
Confidence            45789999999999999999999999999999998765432  22222   125888999999854

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.42  E-value=1.6e-07  Score=74.07  Aligned_cols=78  Identities=14%  Similarity=0.023  Sum_probs=56.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWLLV  156 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~dilv  156 (167)
                      -++++|+||||+|.||..++++|+++|++|+++++.....      ......  ...+..+|+.+.+ .....+..|.++
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~--~~~~~~~D~~~~~~~~~~~~~~d~Vi   84 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMF--CDEFHLVDLRVMENCLKVTEGVDHVF   84 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGT--CSEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcc--cCcEEEeechhHHHHHHHhhcCCeEe
Confidence            3566799999999999999999999999999998754321      000111  3467778998876 333445578888


Q ss_pred             EeccCcc
Q 031009          157 NIYVPSC  163 (167)
Q Consensus       157 N~ai~~~  163 (167)
                      |.|....
T Consensus        85 h~a~~~~   91 (363)
T d2c5aa1          85 NLAADMG   91 (363)
T ss_dssp             ECCCCCC
T ss_pred             ecccccc
Confidence            8875443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=6.1e-08  Score=72.57  Aligned_cols=77  Identities=19%  Similarity=0.137  Sum_probs=55.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYS  152 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~  152 (167)
                      +.+++|+|+||||+|.||.+++++|+++|.  +|++++|++.....       ... ..+....+|+.+.+ ........
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------~~~-~~i~~~~~D~~~~~~~~~~~~~~   81 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------EAY-KNVNQEVVDFEKLDDYASAFQGH   81 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------GGG-GGCEEEECCGGGGGGGGGGGSSC
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------ccc-ceeeeeeeccccccccccccccc
Confidence            356789999999999999999999999994  79999997643221       001 14666677887755 33344457


Q ss_pred             eEEEEecc
Q 031009          153 WLLVNIYV  160 (167)
Q Consensus       153 dilvN~ai  160 (167)
                      |+++|++.
T Consensus        82 d~vi~~~~   89 (232)
T d2bkaa1          82 DVGFCCLG   89 (232)
T ss_dssp             SEEEECCC
T ss_pred             cccccccc
Confidence            88888764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.38  E-value=7.1e-07  Score=70.86  Aligned_cols=83  Identities=14%  Similarity=0.215  Sum_probs=55.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEeC---------ChhHHHHHHHHHHHHh------CCceEEEEeccCCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLK-AGDNVIICSR---------SAERVDSAVQSLREEF------GEQHVWVPPSRLVSA  143 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~r---------~~~~~~~~~~~l~~~~------~~~~~~~~~~Dv~d~  143 (167)
                      +++|+||||+|.||..++++|++ .|++|+++|+         ..+..+.....+....      ......++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            44799999999999999999986 6899999874         1122233333333211      112578899999997


Q ss_pred             h-hhhhhc---cceEEEEeccCc
Q 031009          144 P-YNIIYK---YSWLLVNIYVPS  162 (167)
Q Consensus       144 ~-~~~~~~---~~dilvN~ai~~  162 (167)
                      + ...+.+   ..|+++|.|...
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~  104 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFL  104 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCC
T ss_pred             HHhhhhhhccceeehhhcccccc
Confidence            6 232222   269999988654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.33  E-value=1.1e-07  Score=75.69  Aligned_cols=78  Identities=14%  Similarity=0.192  Sum_probs=52.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeE-EEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hh-hhhc-cceEEEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNV-IICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YN-IIYK-YSWLLVN  157 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~V-i~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~-~~~~-~~dilvN  157 (167)
                      +||||||+|.||.+++++|++.|+.| +++++......  ...+.......++.++.+|++|.. .. .+.. ..|+++|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            58999999999999999999999874 44554321110  011211222336899999999986 23 2333 3789999


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      +|..
T Consensus        80 lAa~   83 (361)
T d1kewa_          80 LAAE   83 (361)
T ss_dssp             CCSC
T ss_pred             Cccc
Confidence            9854

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.18  E-value=9.4e-07  Score=66.55  Aligned_cols=33  Identities=24%  Similarity=0.356  Sum_probs=30.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +|+||||+|.||..++++|.++|++|+.++|.+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            499999999999999999999999999999864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=7.6e-07  Score=69.09  Aligned_cols=74  Identities=16%  Similarity=0.221  Sum_probs=48.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEecc
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNIYV  160 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~ai  160 (167)
                      |+|+||||+|.||+.++++|+++|++|+++++....-.+   .+.......++.+...|+.+..    ....|+++|.|.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~----~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR---NVEHWIGHENFELINHDVVEPL----YIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GTGGGTTCTTEEEEECCTTSCC----CCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHH---HHHHhcCCCceEEEehHHHHHH----HcCCCEEEECcc
Confidence            789999999999999999999999999999863321111   1111112223555555554432    234788999875


Q ss_pred             C
Q 031009          161 P  161 (167)
Q Consensus       161 ~  161 (167)
                      .
T Consensus        75 ~   75 (312)
T d2b69a1          75 P   75 (312)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=8.8e-06  Score=58.60  Aligned_cols=80  Identities=16%  Similarity=0.150  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHH---HHHHHhCCceEEEEeccCCChh-hhhhhc
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQ---SLREEFGEQHVWVPPSRLVSAP-YNIIYK  150 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~---~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~  150 (167)
                      .++++|.++|.|+ ||.|++++..|.+.|. +++++.|+.+..++...   .+....   .......|+.+.. ......
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT---DCVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---SCEEEEEETTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc---CcceEeeecccccchhhhhc
Confidence            3688999999999 7999999999999996 69999999877665544   333322   2345566777755 333345


Q ss_pred             cceEEEEec
Q 031009          151 YSWLLVNIY  159 (167)
Q Consensus       151 ~~dilvN~a  159 (167)
                      ..|++||..
T Consensus        90 ~~diiIN~T   98 (182)
T d1vi2a1          90 SADILTNGT   98 (182)
T ss_dssp             TCSEEEECS
T ss_pred             ccceecccc
Confidence            578999875

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=97.99  E-value=3.1e-06  Score=64.93  Aligned_cols=34  Identities=21%  Similarity=0.369  Sum_probs=30.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      -|+|+||||+|.||.+++++|+++|+.|+++++.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            3679999999999999999999999998887654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.94  E-value=2.2e-05  Score=54.94  Aligned_cols=42  Identities=19%  Similarity=0.206  Sum_probs=37.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      .|.|+|-|+ |.+|+.+|+.|+++|++|++++|+.+++++..+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~   43 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA   43 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh
Confidence            688999887 999999999999999999999999998766544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=97.88  E-value=9.7e-06  Score=62.59  Aligned_cols=79  Identities=14%  Similarity=0.093  Sum_probs=51.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeE------EEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhhhhccceE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNV------IICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNIIYKYSWL  154 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~V------i~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~~~~~~di  154 (167)
                      +|+||||+|.||..+++.|+++|+.|      +..|........  ..+.......++.++..|..+.. ........|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~   79 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDAGLLARELRGVDA   79 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhhcCCCeEEEEeccccchhhhccccccce
Confidence            58999999999999999999999754      444432111000  11111112236899999999977 4444455788


Q ss_pred             EEEeccCc
Q 031009          155 LVNIYVPS  162 (167)
Q Consensus       155 lvN~ai~~  162 (167)
                      ++|.|...
T Consensus        80 vi~~a~~~   87 (322)
T d1r6da_          80 IVHFAAES   87 (322)
T ss_dssp             EEECCSCC
T ss_pred             EEeecccc
Confidence            88887543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.86  E-value=4.8e-06  Score=62.75  Aligned_cols=59  Identities=17%  Similarity=0.253  Sum_probs=40.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh-hhh-hhc-cceEEEEe
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP-YNI-IYK-YSWLLVNI  158 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~~~-~~~-~~dilvN~  158 (167)
                      +||||||+|.||.+++++|.+.|+.| .+++....                   +..|++|.+ ... +.. ..|++||.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~~~D~Vih~   61 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-------------------FCGDFSNPKGVAETVRKLRPDVIVNA   61 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-------------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence            59999999999999999999988644 44443211                   345777765 222 222 25888887


Q ss_pred             cc
Q 031009          159 YV  160 (167)
Q Consensus       159 ai  160 (167)
                      |.
T Consensus        62 Aa   63 (298)
T d1n2sa_          62 AA   63 (298)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.83  E-value=3.9e-05  Score=52.08  Aligned_cols=55  Identities=20%  Similarity=0.361  Sum_probs=45.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .|+|.|+ |.+|+.+++.|.++|+.|++++.+++..++..+    ..   ...++.+|.+|.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~----~~---~~~vi~Gd~~~~~   56 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI---DALVINGDCTKIK   56 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC---SSEEEESCTTSHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhh----hh---hhhhccCcccchh
Confidence            5899998 999999999999999999999999987765433    22   2467889999877

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=2.4e-05  Score=55.62  Aligned_cols=49  Identities=18%  Similarity=0.331  Sum_probs=43.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      .++||.++|-|+ ||-+++++..|.+.|.+|+++.|+.++.+++.+.+..
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            578999999998 9999999999999999999999999988877766543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=4.3e-05  Score=47.65  Aligned_cols=42  Identities=19%  Similarity=0.289  Sum_probs=37.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +++.++|+|++||.|....+.+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            567899999999999999998888999999999998876544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.65  E-value=2.1e-05  Score=57.13  Aligned_cols=35  Identities=34%  Similarity=0.416  Sum_probs=30.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~  114 (167)
                      .|+++||||+|.||++++++|+++|+  +|+...|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            47899999999999999999999997  577777654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.64  E-value=0.00019  Score=51.11  Aligned_cols=40  Identities=18%  Similarity=0.236  Sum_probs=36.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      +|.+++|+|+++|+|.+.++-....|++|+.+++++++.+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~   68 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA   68 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH
Confidence            5889999999999999999988889999999999887643

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=0.00011  Score=51.90  Aligned_cols=42  Identities=21%  Similarity=0.292  Sum_probs=37.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +|++++|+||++|+|...++-....|++|+++++++++.+.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~   69 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA   69 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHH
Confidence            578999999999999999998888999999999998876543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.56  E-value=9.3e-05  Score=53.02  Aligned_cols=42  Identities=29%  Similarity=0.284  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|++||.|....+-.-..|++|+.+.+++++.+.
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~   71 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY   71 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHH
Confidence            347789999999999999988888899999999998887643

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.56  E-value=8.3e-05  Score=52.92  Aligned_cols=73  Identities=18%  Similarity=0.302  Sum_probs=53.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      .+++|.++|-|+ ||.+++++..|.+.+.+|+++.|+.++.++..+.+... .  .+..+..|-.+      ....|++|
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~-~--~~~~~~~~~~~------~~~~diiI   84 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-G--NIQAVSMDSIP------LQTYDLVI   84 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-S--CEEEEEGGGCC------CSCCSEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc-c--ccchhhhcccc------ccccceee
Confidence            578999999988 89999999999998889999999999988887776432 2  24444333211      12356777


Q ss_pred             Eec
Q 031009          157 NIY  159 (167)
Q Consensus       157 N~a  159 (167)
                      |+.
T Consensus        85 N~t   87 (171)
T d1p77a1          85 NAT   87 (171)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            763

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.44  E-value=9.2e-05  Score=52.56  Aligned_cols=42  Identities=29%  Similarity=0.361  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +++.|+|+||+||.|...++-.-..|++|+.+.+++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            456799999999999999887777899999999998876543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00023  Score=50.14  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=35.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      +|++++|+|++|++|...++.....|++|+++++++++.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~   67 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK   67 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccc
Confidence            5789999999999999999988889999999998876543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.36  E-value=0.00058  Score=47.86  Aligned_cols=47  Identities=28%  Similarity=0.449  Sum_probs=41.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l  124 (167)
                      ++++|.++|.|+ |++|..+++.|...|+ ++.++.|+.++.++...++
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            688999999998 9999999999999997 5999999988877666654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=8.8e-05  Score=55.61  Aligned_cols=30  Identities=20%  Similarity=0.459  Sum_probs=27.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-eEEEEeC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSR  112 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~-~Vi~~~r  112 (167)
                      ||||||+|.||..++++|+++|+ .|+++|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            89999999999999999999996 6888763

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.25  E-value=0.00022  Score=48.00  Aligned_cols=55  Identities=15%  Similarity=0.211  Sum_probs=42.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      |.++|.|+ |-+|+.+++.|.+.|+.|++++.+++..++..    .. +   ..++.+|.++.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~-~---~~~~~gd~~~~~   55 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY-A---THAVIANATEEN   55 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TT-C---SEEEECCTTCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----Hh-C---Ccceeeecccch
Confidence            45677777 89999999999999999999999988765442    21 2   244567888876

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.22  E-value=0.00027  Score=49.91  Aligned_cols=42  Identities=19%  Similarity=0.258  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      -+|++++|+|++|++|...++.....|++|+.+++++++.+.
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~   67 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL   67 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccc
Confidence            367899999999999999999888899999999998776543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.14  E-value=0.00033  Score=49.47  Aligned_cols=40  Identities=25%  Similarity=0.327  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      +|++++|+||++++|...++.....|++|+++++++++.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~   64 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   64 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc
Confidence            4779999999999999999988889999999998876643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.0004  Score=49.57  Aligned_cols=41  Identities=20%  Similarity=0.306  Sum_probs=35.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      .++.++|+||+||+|...++-.-..|++|+.+++++++.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~   71 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH
Confidence            34589999999999999998888899999999999887643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.12  E-value=0.00065  Score=48.53  Aligned_cols=51  Identities=25%  Similarity=0.232  Sum_probs=39.0

Q ss_pred             CCC-EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCC
Q 031009           79 PPY-NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGE  130 (167)
Q Consensus        79 ~gk-~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~  130 (167)
                      +|+ +++++||+||+|.+.++-.-..|++|+.+.++.+..++..+.+++. |.
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l-Ga   79 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-GA   79 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-TC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc-cc
Confidence            354 4555899999999998877778999999998877777666666554 44

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.08  E-value=0.00074  Score=47.77  Aligned_cols=51  Identities=27%  Similarity=0.474  Sum_probs=44.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG  129 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~  129 (167)
                      ++++|.++|-|+ ||.+++++..|.+.| +|.+..|+.++.+++.+++.....
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~   65 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN   65 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhc
Confidence            588999999988 899999999997766 999999999999988888866543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00031  Score=44.68  Aligned_cols=38  Identities=21%  Similarity=0.162  Sum_probs=34.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +++||+++|.|. |.-|+++++.|.++|++|+++|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            588999999998 77899999999999999999998653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.99  E-value=0.0015  Score=42.79  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=34.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +++||+++|.|+ |.+|...++.|++.|++|++++....
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            789999999999 77999999999999999999887554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.0013  Score=47.28  Aligned_cols=43  Identities=14%  Similarity=0.315  Sum_probs=37.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      |++.|-|+ |-+|..+|..++.+|+.|+++|++++.+++..+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            67999998 88999999999999999999999998766554443

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.89  E-value=0.0011  Score=47.12  Aligned_cols=41  Identities=12%  Similarity=0.064  Sum_probs=31.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHHHHH
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSA  120 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~~~~  120 (167)
                      +++|+|+||+||+|...++-.-..|++ |+.++.++++..+.
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l   72 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFL   72 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhh
Confidence            478999999999999998887778986 44456666554433

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.86  E-value=0.0012  Score=46.43  Aligned_cols=44  Identities=20%  Similarity=0.291  Sum_probs=37.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS  123 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~  123 (167)
                      ++|.++|-|+ ||.+++++..|.+.|. +|.++.|+.++.+++.+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~   60 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL   60 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence            5678999988 9999999999999996 699999999887765544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.0022  Score=43.90  Aligned_cols=58  Identities=14%  Similarity=0.147  Sum_probs=46.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .++|.|. |-+|+.+++.|.++|.+|++++.+++...+..+++..   . .+.++.+|.+|++
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~---~-~~~vi~Gd~~d~~   62 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---D-NADVIPGDSNDSS   62 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---T-TCEEEESCTTSHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc---C-CcEEEEccCcchH
Confidence            4888888 7999999999999999999999988766555554432   2 4788899999976

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.83  E-value=0.00099  Score=46.56  Aligned_cols=40  Identities=28%  Similarity=0.286  Sum_probs=34.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++++.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~   66 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED   66 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHH
Confidence            5778999987 899999888777889999999999887654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.82  E-value=0.0015  Score=45.55  Aligned_cols=39  Identities=21%  Similarity=0.231  Sum_probs=35.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      |++.|.|+ |.+|.+++..|+++|++|.+++|+++..+..
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~   40 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEI   40 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            68899998 9999999999999999999999998776544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.81  E-value=0.0024  Score=47.06  Aligned_cols=68  Identities=18%  Similarity=0.283  Sum_probs=45.6

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHCCCeEEEEeCCh-------------hHHHHHHHHHHH
Q 031009           76 PMLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSA-------------ERVDSAVQSLRE  126 (167)
Q Consensus        76 ~~l~gk~vlITGa----------------s~GIG~aia~~L~~~G~~Vi~~~r~~-------------~~~~~~~~~l~~  126 (167)
                      .+|+||.++||+|                ||-.|.++|+++..+|++|.++.-..             ...+++.+.+..
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~   81 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNA   81 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHh
Confidence            3789999999886                46799999999999999999875321             123444444433


Q ss_pred             HhCCceEEEEeccCCCh
Q 031009          127 EFGEQHVWVPPSRLVSA  143 (167)
Q Consensus       127 ~~~~~~~~~~~~Dv~d~  143 (167)
                      .....++.+...=++|.
T Consensus        82 ~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          82 SVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HGGGCSEEEECCBCCSE
T ss_pred             hhccceeEeeeechhhh
Confidence            33333566655555554

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.81  E-value=0.0017  Score=45.13  Aligned_cols=40  Identities=25%  Similarity=0.282  Sum_probs=34.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|+| +|++|...++.+...|++|+++++++++++.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~   65 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEV   65 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHH
Confidence            466899997 5899999999888899999999999887643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.0017  Score=48.08  Aligned_cols=81  Identities=22%  Similarity=0.215  Sum_probs=56.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .++.++|+|.|+ ||+|..++..|+..| -++.++|.+                   ..+.+.+.+.+++..+..++..+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            477889999997 999999999999999 578888743                   12566666777776665566666


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ...+.+..........|++++.
T Consensus       106 ~~~~~~~~~~~~~~~~divid~  127 (247)
T d1jw9b_         106 NALLDDAELAALIAEHDLVLDC  127 (247)
T ss_dssp             CSCCCHHHHHHHHHTSSEEEEC
T ss_pred             hhhhhhccccccccccceeeec
Confidence            6555554444444445666554

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.76  E-value=0.0015  Score=46.07  Aligned_cols=40  Identities=25%  Similarity=0.302  Sum_probs=34.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      -+|.+++|+|+ |++|...++.+...|+ +|+++++++++.+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~   67 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK   67 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccc
Confidence            35789999997 8999999999888997 7999999988764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.74  E-value=0.002  Score=44.56  Aligned_cols=40  Identities=20%  Similarity=0.218  Sum_probs=34.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~   66 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL   66 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh
Confidence            4778999886 999999998888889999999999877653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.0029  Score=44.67  Aligned_cols=78  Identities=13%  Similarity=0.142  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      ++.||.++|.|.|.=.|+-++..|.++|++|++++.....+.+...   .    .++.+..+.....-.....+...++|
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~---~----ADivI~a~G~p~~i~~~~vk~g~vvI  106 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE---N----ADLLIVAVGKPGFIPGDWIKEGAIVI  106 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH---H----CSEEEECSCCTTCBCTTTSCTTCEEE
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh---h----hhHhhhhccCcccccccccCCCcEEE
Confidence            6899999999999999999999999999999999877655543322   1    14555555444333333444456777


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       107 DvGi~  111 (166)
T d1b0aa1         107 DVGIN  111 (166)
T ss_dssp             ECCCE
T ss_pred             ecCce
Confidence            76654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.73  E-value=0.0013  Score=45.13  Aligned_cols=40  Identities=18%  Similarity=0.159  Sum_probs=35.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      ....|++.|.||.|-+|..+++.|.++|++|.++|++...
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            4456789999999999999999999999999999998654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.70  E-value=0.0032  Score=44.93  Aligned_cols=84  Identities=15%  Similarity=0.092  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH-----HHHHHhCCceEEEEeccCCChhhhh---
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ-----SLREEFGEQHVWVPPSRLVSAPYNI---  147 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~d~~~~~---  147 (167)
                      ..+.||++.|.|. |.||+++++.+...|.+|+..++.....+....     ++.+.....++..+.+-+++.....   
T Consensus        40 ~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin~  118 (184)
T d1ygya1          40 TEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDK  118 (184)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCH
T ss_pred             ccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhhH
Confidence            3688999999987 999999999999999999999986543221111     1222222236888888877654221   


Q ss_pred             --hh--ccceEEEEecc
Q 031009          148 --IY--KYSWLLVNIYV  160 (167)
Q Consensus       148 --~~--~~~dilvN~ai  160 (167)
                        +.  +..-++||.+=
T Consensus       119 ~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         119 EALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             HHHTTSCTTEEEEECSC
T ss_pred             HHHhhhCCCceEEEecc
Confidence              11  22668888763

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.70  E-value=0.0022  Score=46.64  Aligned_cols=42  Identities=29%  Similarity=0.427  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +++||+++|.|. |.+|..+++.|.+.|++|++.|.+.+.+..
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            699999999986 889999999999999999999998876654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.65  E-value=0.00099  Score=47.64  Aligned_cols=82  Identities=21%  Similarity=0.169  Sum_probs=55.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH-HHHHHHHHhCCceEEEEeccCCChhhhh-------h
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS-AVQSLREEFGEQHVWVPPSRLVSAPYNI-------I  148 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dv~d~~~~~-------~  148 (167)
                      .+.||++.|-|. |.||+.+++.+...|.+|+.++++...... ....+.+.....++....+-++++....       .
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~~l~~  117 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLAL  117 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccccccceeeeechhhhhhccchhhcccccccccccccccceeee
Confidence            588999999998 679999999999999999999986532110 0112223333446777777776543211       1


Q ss_pred             hccceEEEEec
Q 031009          149 YKYSWLLVNIY  159 (167)
Q Consensus       149 ~~~~dilvN~a  159 (167)
                      .+..-++||.+
T Consensus       118 mk~~ailIN~~  128 (181)
T d1qp8a1         118 MAEDAVFVNVG  128 (181)
T ss_dssp             SCTTCEEEECS
T ss_pred             ccccceEEecc
Confidence            22267888876

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.65  E-value=0.0018  Score=46.90  Aligned_cols=83  Identities=19%  Similarity=0.130  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH----HHHHHHHhCCceEEEEeccCCChhhhh-----
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA----VQSLREEFGEQHVWVPPSRLVSAPYNI-----  147 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~----~~~l~~~~~~~~~~~~~~Dv~d~~~~~-----  147 (167)
                      .+.||++.|.|. |.||+.+++.+...|++|+..++......+.    ...+.+.....++....+-.++.....     
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~~~  118 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDES  118 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHH
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccceeeeccccccccccccccccCCccccccccccHHH
Confidence            688999999988 9999999999999999999998764322111    011222222236777777776554221     


Q ss_pred             --hhccceEEEEecc
Q 031009          148 --IYKYSWLLVNIYV  160 (167)
Q Consensus       148 --~~~~~dilvN~ai  160 (167)
                        ..+..-++||.+-
T Consensus       119 l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         119 IAKMKQDVVIVNVSR  133 (197)
T ss_dssp             HHHSCTTEEEEECSC
T ss_pred             HhhhCCccEEEecCc
Confidence              1222678888763

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0052  Score=43.44  Aligned_cols=78  Identities=12%  Similarity=0.175  Sum_probs=56.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLV  156 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilv  156 (167)
                      +++||.++|.|.|.=.|+-++..|+++|++|.+++.....+.+.   .    ...++........+.-.....+...+++
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~---~----~~aDivi~a~G~~~~i~~~~vk~g~ivi  108 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE---V----NKGDILVVATGQPEMVKGEWIKPGAIVI  108 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH---H----TTCSEEEECCCCTTCBCGGGSCTTCEEE
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH---H----hhccchhhccccccccccccccCCCeEe
Confidence            68999999999999999999999999999999999876554322   1    2235666555554443444455566777


Q ss_pred             EeccC
Q 031009          157 NIYVP  161 (167)
Q Consensus       157 N~ai~  161 (167)
                      +.+++
T Consensus       109 Dvgi~  113 (170)
T d1a4ia1         109 DCGIN  113 (170)
T ss_dssp             ECCCB
T ss_pred             ccCcc
Confidence            77664

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.63  E-value=0.0043  Score=44.27  Aligned_cols=85  Identities=15%  Similarity=0.117  Sum_probs=57.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH--HHHHH-----HHHHHHhCCceEEEEeccCCChhhhh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAV-----QSLREEFGEQHVWVPPSRLVSAPYNI  147 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~--~~~~~-----~~l~~~~~~~~~~~~~~Dv~d~~~~~  147 (167)
                      ...+.++++.|.|. |.||+++++.+...|.+|+..++....  ..+..     ..+.+.....++..+.+.+++.....
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~l  117 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHM  117 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccccchhh
Confidence            34789999999987 899999999999999999999975322  11110     11223333347888888888754222


Q ss_pred             h-------hccceEEEEecc
Q 031009          148 I-------YKYSWLLVNIYV  160 (167)
Q Consensus       148 ~-------~~~~dilvN~ai  160 (167)
                      +       .+..-++||.+=
T Consensus       118 i~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         118 INDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             BSHHHHTTSCTTEEEEECSC
T ss_pred             hHHHHHHhCCCCCEEEecCc
Confidence            1       122678888773

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.61  E-value=0.0064  Score=42.35  Aligned_cols=41  Identities=15%  Similarity=0.221  Sum_probs=34.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~  119 (167)
                      -+|.+++|.|+ +|+|...+..+...| .+|++.++++++.+.
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~   68 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAK   68 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHH
Confidence            35778999999 789999999999998 579999999887653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.57  E-value=0.0019  Score=46.15  Aligned_cols=43  Identities=9%  Similarity=0.190  Sum_probs=36.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      |++.|.|+ |=+|..+|..++.+|++|++.|++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            46888888 88999999999999999999999998776655544

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.56  E-value=0.0037  Score=44.97  Aligned_cols=81  Identities=17%  Similarity=0.054  Sum_probs=55.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH---------HHHHHHHHhCCceEEEEeccCCChhhh
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS---------AVQSLREEFGEQHVWVPPSRLVSAPYN  146 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~---------~~~~l~~~~~~~~~~~~~~Dv~d~~~~  146 (167)
                      ..+.||++.|.|. |.||+.+++.+...|++|+..++.......         ..+++-..   .++..+.+.+++....
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~---sD~i~~~~plt~~T~~  120 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFH---SDCVTLHCGLNEHNHH  120 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHH---CSEEEECCCCCTTCTT
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhcccc---CCEEEEeecccccchh
Confidence            4689999999988 999999999999999999999986432111         12233222   3677787777765422


Q ss_pred             h-------hhccceEEEEecc
Q 031009          147 I-------IYKYSWLLVNIYV  160 (167)
Q Consensus       147 ~-------~~~~~dilvN~ai  160 (167)
                      .       ..+..-++||.+=
T Consensus       121 li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         121 LINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             SBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhHHHHhccCCCCeEEecCC
Confidence            1       2223678888774

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.54  E-value=0.0081  Score=42.19  Aligned_cols=41  Identities=17%  Similarity=0.330  Sum_probs=35.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~  119 (167)
                      -+|.+++|.|+ ||+|...++.+...| .+|+++|+++++++.
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~   69 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK   69 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH
Confidence            35778999987 999999999999999 579999999988653

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.52  E-value=0.0028  Score=43.98  Aligned_cols=41  Identities=20%  Similarity=0.315  Sum_probs=34.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|++|++|...++.+...| .+|+++++++++.+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~   68 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA   68 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHH
Confidence            46789999999999999999888888 579999998876543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.0039  Score=43.26  Aligned_cols=39  Identities=23%  Similarity=0.282  Sum_probs=33.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      +|.+++|.|+ |++|...++.+...|++++++++++++.+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~   68 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE   68 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH
Confidence            5778999986 89999999888889999999999887754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.46  E-value=0.002  Score=46.19  Aligned_cols=43  Identities=26%  Similarity=0.256  Sum_probs=36.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      ++..+++.|-|+ |..|.++|..|++.|++|.+++|+++..+++
T Consensus         4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i   46 (189)
T d1n1ea2           4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLV   46 (189)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred             cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence            345567889988 8899999999999999999999998766543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.38  E-value=0.0041  Score=42.80  Aligned_cols=50  Identities=10%  Similarity=0.211  Sum_probs=40.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      .-.++++.|.|+ |.+|..++..|+..|  .+++++|++++.++....++...
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~   54 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG   54 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhC
Confidence            345667888897 999999999999988  36999999998877666677543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.38  E-value=0.0056  Score=43.91  Aligned_cols=83  Identities=16%  Similarity=0.063  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH-------HHHHHhCCceEEEEeccCCChhhhh-
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ-------SLREEFGEQHVWVPPSRLVSAPYNI-  147 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~-------~l~~~~~~~~~~~~~~Dv~d~~~~~-  147 (167)
                      ..+.||++.|.|. |.||+.+++.+...|.+|+..++..........       .+.+.....++....+-++++.... 
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~li  121 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFF  121 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhhee
Confidence            4688999999988 999999999999999999999875432111100       1222222236777777777653211 


Q ss_pred             ------hhccceEEEEec
Q 031009          148 ------IYKYSWLLVNIY  159 (167)
Q Consensus       148 ------~~~~~dilvN~a  159 (167)
                            ..+..-++||.+
T Consensus       122 ~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         122 NKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             SHHHHTTSCTTEEEEECS
T ss_pred             cHHHhhCcCCccEEEecC
Confidence                  222367888876

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0054  Score=42.60  Aligned_cols=40  Identities=25%  Similarity=0.287  Sum_probs=34.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~   66 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK   66 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHH
Confidence            4668999987 9999999999999998 79999999887653

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.33  E-value=0.0051  Score=42.28  Aligned_cols=40  Identities=25%  Similarity=0.275  Sum_probs=34.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence            4678999875 999999988888899999999999887653

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.21  E-value=0.0048  Score=43.15  Aligned_cols=40  Identities=20%  Similarity=0.285  Sum_probs=33.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      +-|.|. |-+|.++++.|+++|++|.+++|++++.+++.++
T Consensus         4 IGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            445554 8999999999999999999999999988776554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.19  E-value=0.0079  Score=41.56  Aligned_cols=49  Identities=14%  Similarity=0.102  Sum_probs=38.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      +-+.+++.|.|+ |.+|..++..++..+ ++++++|.+++.++....++..
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~   53 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   53 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhh
Confidence            445567888897 999999999998888 6899999998877666566543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0069  Score=42.50  Aligned_cols=40  Identities=20%  Similarity=0.248  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      .++.||+++|.|- |-+|+.+|+.+...|++|++++.++-.
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            3689999999988 689999999999999999999998754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.15  E-value=0.0064  Score=41.90  Aligned_cols=37  Identities=27%  Similarity=0.355  Sum_probs=31.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA  120 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~  120 (167)
                      +.|.|. |-+|.++++.|.++|++|+++||+++..++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a   39 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKA   39 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHH
Confidence            556666 9999999999999999999999998776654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.14  E-value=0.0021  Score=44.00  Aligned_cols=35  Identities=17%  Similarity=0.331  Sum_probs=32.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      .++||.++|.|| |.+|..-++.|++.|++|++++.
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            689999999999 77999999999999999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.09  E-value=0.0092  Score=44.08  Aligned_cols=47  Identities=21%  Similarity=0.309  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHH
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~  123 (167)
                      .+++||+++|-|. |..|..+++.|.+.|++|++.+.+...++....+
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            3689999999987 8999999999999999999999988777655443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.04  E-value=0.0094  Score=42.87  Aligned_cols=81  Identities=20%  Similarity=0.153  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH------HHHHHHHHHhCCceEEEEeccCCChhhhh--
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD------SAVQSLREEFGEQHVWVPPSRLVSAPYNI--  147 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~------~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~--  147 (167)
                      ..+.||++.|-|. |.||+.+++.+...|++|+..++......      ...+++-+.   .++..+.+-.++.....  
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~---~D~v~~~~plt~~T~~li~  116 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQ---SDVIDLHVPGIEQNTHIIN  116 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHH---CSEEEECCCCCGGGTTSBC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHHh---cccceeeeccccccccccc
Confidence            3688999999988 89999999999999999999997543210      012233222   26777777776553221  


Q ss_pred             -----hhccceEEEEecc
Q 031009          148 -----IYKYSWLLVNIYV  160 (167)
Q Consensus       148 -----~~~~~dilvN~ai  160 (167)
                           ..+..-++||.+=
T Consensus       117 ~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         117 EAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             HHHHHHSCTTEEEEECSC
T ss_pred             HHHhhccCCceEEEeccc
Confidence                 1223678888874

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.03  E-value=0.0077  Score=41.29  Aligned_cols=48  Identities=17%  Similarity=0.332  Sum_probs=38.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      .+.+++.|.|+ |.+|..++..|+.+|  .+|+++|++++..+....++..
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~   52 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLED   52 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhc
Confidence            34557888896 999999999999988  5799999999877766666653

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.01  E-value=0.015  Score=39.80  Aligned_cols=45  Identities=18%  Similarity=0.346  Sum_probs=35.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChh--HHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE--RVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~--~~~~~~~~l~~  126 (167)
                      ++.|.|++|.+|..++..|+.+|  .+++++|++++  +++....++..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~   50 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD   50 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchh
Confidence            48999999999999999999998  47999998763  34444555554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.00  E-value=0.0062  Score=43.72  Aligned_cols=37  Identities=30%  Similarity=0.315  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ++-+.|+|+|.|| |-.|+++|..|+++|++|.+++|.
T Consensus         2 ~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           2 MMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3455678999988 889999999999999999999874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.99  E-value=0.0077  Score=41.61  Aligned_cols=40  Identities=25%  Similarity=0.313  Sum_probs=33.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV  121 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~  121 (167)
                      |+|-+.|- |-+|.++|+.|+++|++|.+++|+.++.+...
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            45667766 89999999999999999999999988765543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.98  E-value=0.0072  Score=42.35  Aligned_cols=42  Identities=19%  Similarity=0.316  Sum_probs=35.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA  120 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~  120 (167)
                      -+|.+++|.|+ ||+|...++.+...|+ +|+++++++++++..
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a   68 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA   68 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH
Confidence            45778999986 8999999999988895 699999998876543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.90  E-value=0.036  Score=38.90  Aligned_cols=39  Identities=15%  Similarity=0.157  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ..+++||.++|.|-|.=.|+-++..|+++|+.|..++.+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            348999999999999999999999999999999988754

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.88  E-value=0.0072  Score=42.38  Aligned_cols=40  Identities=15%  Similarity=0.120  Sum_probs=33.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|+ ||+|...++.+...|+ +|+++++++++.+.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~   67 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEA   67 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHH
Confidence            4667999986 8999999998888897 69999998876543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.86  E-value=0.0062  Score=42.64  Aligned_cols=41  Identities=20%  Similarity=0.253  Sum_probs=35.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      +.|-+.|- |-+|..+++.|+++|++|++++|++++.+++.+
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   43 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   43 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            35777877 899999999999999999999999988876644

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.83  E-value=0.019  Score=39.58  Aligned_cols=40  Identities=20%  Similarity=0.256  Sum_probs=32.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      -+|.+++|.|+ +|+|...++.+...|+ .|++.++++++.+
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~   67 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA   67 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH
Confidence            35778999998 6999999999988995 5777788777654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.0062  Score=41.53  Aligned_cols=33  Identities=18%  Similarity=0.266  Sum_probs=30.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +|.|.|+ |.+|..++..|++.|++|.+++|+++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            5788888 99999999999999999999998764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.62  E-value=0.015  Score=39.98  Aligned_cols=39  Identities=26%  Similarity=0.460  Sum_probs=33.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ  122 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~  122 (167)
                      |-|.|. |-+|..+|+.|+++|++|++++|++++.++..+
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            556666 899999999999999999999999987766543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.027  Score=39.82  Aligned_cols=82  Identities=17%  Similarity=0.014  Sum_probs=55.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH------HHHHHHHHHhCCceEEEEeccCCChhhhh---
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD------SAVQSLREEFGEQHVWVPPSRLVSAPYNI---  147 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~------~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~---  147 (167)
                      .+.+|++.|-|. |.||+.+++.+...|.+|+..++......      +..+++-+.   .++..+.+.+++.....   
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~---sDii~i~~plt~~T~~li~~  116 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNM---SDVVSLHVPENPSTKNMMGA  116 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHH---CSEEEECCCSSTTTTTCBCH
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhh---ccceeecccCCcchhhhccH
Confidence            688999999977 99999999999999999999987543100      012233222   26888888877654221   


Q ss_pred             ----hhccceEEEEeccCc
Q 031009          148 ----IYKYSWLLVNIYVPS  162 (167)
Q Consensus       148 ----~~~~~dilvN~ai~~  162 (167)
                          ..+..-++||.+--+
T Consensus       117 ~~l~~mk~~a~lIN~aRG~  135 (188)
T d1sc6a1         117 KEISLMKPGSLLINASRGT  135 (188)
T ss_dssp             HHHHHSCTTEEEEECSCSS
T ss_pred             HHHhhCCCCCEEEEcCcHH
Confidence                122378888887443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.60  E-value=0.019  Score=40.50  Aligned_cols=45  Identities=11%  Similarity=0.206  Sum_probs=31.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-------eEEEEeCCh--hHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSA--ERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~-------~Vi~~~r~~--~~~~~~~~~l~~  126 (167)
                      +|.||||+|.||..++..|+..+.       .+.+++...  +.++....++..
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d   79 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED   79 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcc
Confidence            699999999999999999997532       455666554  334444445544

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.0085  Score=48.14  Aligned_cols=80  Identities=18%  Similarity=0.262  Sum_probs=56.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC-------------------hhHHHHHHHHHHHHhCCceEEEE
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWVP  136 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  136 (167)
                      .+++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.++...+..++..+
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~  112 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH  112 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEee
Confidence            356778999999 8899999999999995 68888743                   12456666677666555567777


Q ss_pred             eccCCChhhhhhhccceEEEEe
Q 031009          137 PSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus       137 ~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ..++.+... .+.+..|+++++
T Consensus       113 ~~~i~~~~~-~~~~~~DlVi~~  133 (426)
T d1yovb1         113 FNKIQDFND-TFYRQFHIIVCG  133 (426)
T ss_dssp             CSCGGGBCH-HHHTTCSEEEEC
T ss_pred             eccccchHH-HHHHhcchheec
Confidence            777765443 334445666654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.52  E-value=0.031  Score=38.74  Aligned_cols=49  Identities=18%  Similarity=0.372  Sum_probs=39.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      .++..++.|.|+ |.+|..++..|+..|  .+++++|++++.++....+|..
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~   66 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQH   66 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhC
Confidence            444456788886 999999999999998  3699999999887777677764

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.45  E-value=0.019  Score=39.24  Aligned_cols=46  Identities=17%  Similarity=0.363  Sum_probs=38.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      |++.|.|+ |.+|..++..|+.+|  .+++++|++++.++....++...
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a   49 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA   49 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhcc
Confidence            67888895 899999999999988  47999999998877666666643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.41  E-value=0.02  Score=39.45  Aligned_cols=41  Identities=17%  Similarity=0.284  Sum_probs=33.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      -+|.+++|.|+ +|+|...+..+...|+ +|+++++++++++.
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~   68 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK   68 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHH
Confidence            35778999986 7888888888888885 68889999887653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.37  E-value=0.022  Score=39.83  Aligned_cols=39  Identities=18%  Similarity=0.224  Sum_probs=33.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      +|.+++|.|+ ||+|...++.+...|+ .|++.++++++++
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~   67 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP   67 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH
Confidence            5678999975 9999999999999997 5888899887753

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.36  E-value=0.015  Score=38.30  Aligned_cols=35  Identities=34%  Similarity=0.416  Sum_probs=30.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ++|.++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888877 8999999999999999999997754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.33  E-value=0.022  Score=39.12  Aligned_cols=40  Identities=30%  Similarity=0.359  Sum_probs=33.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCC--eEEEEeCChhHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAV  121 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~--~Vi~~~r~~~~~~~~~  121 (167)
                      |++.|.|. |-+|..+++.|.+.|+  +|+++|++++..+...
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~   43 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   43 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence            56888886 9999999999999995  6889999987765443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.31  E-value=0.0098  Score=42.83  Aligned_cols=34  Identities=24%  Similarity=0.225  Sum_probs=30.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +|+|+|.|| |--|+..|.+|+++|++|.++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            688999988 7789999999999999999998653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.29  E-value=0.025  Score=40.24  Aligned_cols=40  Identities=25%  Similarity=0.301  Sum_probs=32.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD  118 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~  118 (167)
                      -+|.+++|.|+ |++|...+......|+ +|+++++++++++
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~   64 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLA   64 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhH
Confidence            35778999986 8999888888777775 7999999887664

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.13  E-value=0.019  Score=37.74  Aligned_cols=35  Identities=31%  Similarity=0.406  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ++|.++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            3578999988 9999999999999999999998764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.10  E-value=0.024  Score=39.31  Aligned_cols=40  Identities=15%  Similarity=0.255  Sum_probs=31.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|+ |++|...++.+...|++ |++.++++++++.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~   68 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL   68 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH
Confidence            4678999987 89999999888888875 5667877766543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.04  E-value=0.027  Score=38.89  Aligned_cols=40  Identities=23%  Similarity=0.253  Sum_probs=32.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDS  119 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~  119 (167)
                      +|.+++|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~   72 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL   72 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHH
Confidence            4778999986 9999999888877785 67888888876543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.01  E-value=0.027  Score=38.69  Aligned_cols=44  Identities=18%  Similarity=0.101  Sum_probs=36.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .+|+.||.-|++.|   ..+..|+++|++|+.+|.+++.++...+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~   62 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER   62 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence            36778999999877   467789999999999999998887665544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.99  E-value=0.021  Score=36.98  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=29.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++|.|| |-+|.++|..|.+.|.+|.++.|.+
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            67889988 9999999999999999999998764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.98  E-value=0.026  Score=38.25  Aligned_cols=41  Identities=27%  Similarity=0.410  Sum_probs=33.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS  123 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~  123 (167)
                      ++.+-|+ |-+|.++++.|++.| ++|++++|++++.++..++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3556666 999999999999888 8999999999877655443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.98  E-value=0.044  Score=35.68  Aligned_cols=34  Identities=24%  Similarity=0.235  Sum_probs=30.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .|.++|.|| |-+|.++|..|.+.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            367899988 9999999999999999999998753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.94  E-value=0.03  Score=39.07  Aligned_cols=39  Identities=21%  Similarity=0.215  Sum_probs=36.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER  116 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~  116 (167)
                      ++.||+++|.|- |-+|+.+|+++...|++|+++..++-.
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            689999999988 889999999999999999999998743

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=94.84  E-value=0.097  Score=36.11  Aligned_cols=49  Identities=16%  Similarity=0.351  Sum_probs=40.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHH
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      .++.+++.|.|+ |.+|..++..|+..|  .+++++|++++..+....++..
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h   67 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH   67 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhc
Confidence            345567888896 999999999999999  3699999998887766677754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.80  E-value=0.048  Score=35.66  Aligned_cols=33  Identities=18%  Similarity=0.319  Sum_probs=29.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++|.|| |-||.++|..|.+.|.+|.++.+.+
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            57888888 8999999999999999999988754

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.76  E-value=0.024  Score=37.35  Aligned_cols=53  Identities=11%  Similarity=0.098  Sum_probs=39.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      |.++|.|. |.+|+.+++.|  +|..|++++.+++..+..    ...    .+.++.+|.++++
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~~----~~~~i~Gd~~~~~   53 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LRS----GANFVHGDPTRVS   53 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HHT----TCEEEESCTTSHH
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hhc----CccccccccCCHH
Confidence            56888886 88999999998  466688888887765432    222    3677889999876

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.74  E-value=0.028  Score=38.48  Aligned_cols=33  Identities=21%  Similarity=0.330  Sum_probs=26.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-------eEEEEeCCh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSA  114 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~-------~Vi~~~r~~  114 (167)
                      +|.|+||+|.+|..++..|+..+.       .+++.|.++
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            699999999999999999987552       366666544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.73  E-value=0.032  Score=39.70  Aligned_cols=36  Identities=25%  Similarity=0.246  Sum_probs=30.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +.|.|. |-+|+.+|..|+++|++|+++|.+++..+.
T Consensus         3 I~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            555655 999999999999999999999998776543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.023  Score=37.39  Aligned_cols=33  Identities=18%  Similarity=0.176  Sum_probs=29.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|.+
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            67899988 7899999999999999999998863

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.64  E-value=0.033  Score=38.07  Aligned_cols=23  Identities=30%  Similarity=0.476  Sum_probs=21.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG  104 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G  104 (167)
                      +|.|+||+|.+|..++..|+..+
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcc
Confidence            69999999999999999999865

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.58  E-value=0.036  Score=37.67  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=33.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      +.+-|+ |-+|.++++.|.+.|+++++++|+.++.++..+++
T Consensus         3 Ig~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            455555 89999999999999999999999988877665543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.56  E-value=0.03  Score=36.29  Aligned_cols=36  Identities=17%  Similarity=0.268  Sum_probs=31.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .++|.++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            35788999988 9999999999999999999998764

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.51  E-value=0.12  Score=37.25  Aligned_cols=81  Identities=25%  Similarity=0.257  Sum_probs=58.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVN  157 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN  157 (167)
                      -+|..|+..|+++|--.++.-+++  |.+|+.++++++-.+...+.+... +..++.+...|..+.. .....++-++++
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~g~-~~~~pfD~Iiv~  152 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSKGF-PPKAPYDVIIVT  152 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCC-GGGCCEEEEEEC
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECccccCC-cccCcceeEEee
Confidence            457789999999888888777776  567999999987776666666554 4447999999987532 223445777777


Q ss_pred             eccCc
Q 031009          158 IYVPS  162 (167)
Q Consensus       158 ~ai~~  162 (167)
                      .++..
T Consensus       153 ~a~~~  157 (215)
T d1jg1a_         153 AGAPK  157 (215)
T ss_dssp             SBBSS
T ss_pred             ccccc
Confidence            77654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.49  E-value=0.04  Score=37.23  Aligned_cols=44  Identities=11%  Similarity=0.108  Sum_probs=35.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      |++.|.|+ |.+|.+++..|+.++ ++++++|.+++..+....++.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~   46 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   46 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhh
Confidence            45777786 999999999999888 689999998877665555553

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.48  E-value=0.02  Score=39.63  Aligned_cols=34  Identities=12%  Similarity=0.201  Sum_probs=29.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~  114 (167)
                      +|+|+|.|| |-.|++.|..|+++|++ |.++++..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            577999988 89999999999999985 99988764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.46  E-value=0.023  Score=37.22  Aligned_cols=34  Identities=32%  Similarity=0.401  Sum_probs=30.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +|.++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            467888887 9999999999999999999998764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.39  E-value=0.064  Score=36.62  Aligned_cols=44  Identities=14%  Similarity=0.205  Sum_probs=35.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHH
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      .++.|.|+ |++|..++..|...+ .+++++|++++..+....++.
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~   48 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTS   48 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchh
Confidence            35778895 999999999888888 679999998887766655554

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.32  E-value=0.035  Score=35.96  Aligned_cols=33  Identities=18%  Similarity=0.149  Sum_probs=29.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++|.|| |-+|.++|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56888877 9999999999999999999998864

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.12  Score=38.95  Aligned_cols=64  Identities=22%  Similarity=0.173  Sum_probs=45.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .++||+|+-.|++.|+   ++..++++|+ +|+.++.++.. ....+.........++.++..|+.+..
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~   97 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVH   97 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSC
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhc
Confidence            4679999999998885   5667778896 69999988754 333344444433446888888887653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.28  E-value=0.04  Score=35.91  Aligned_cols=33  Identities=18%  Similarity=0.271  Sum_probs=29.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            67899988 9999999999999999999988654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=94.21  E-value=0.065  Score=36.01  Aligned_cols=42  Identities=7%  Similarity=0.169  Sum_probs=33.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      ++.|.|+ |.+|..++..|+..|  .+++++|++++.++....++
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~   45 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM   45 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhh
Confidence            4667796 999999999999998  57999999987766544444

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.075  Score=37.32  Aligned_cols=37  Identities=19%  Similarity=0.280  Sum_probs=32.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ..++|.|+|.|| |--|++.|..|+++|++|.++.+..
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            456788999988 8899999999999999999998764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.07  E-value=0.03  Score=36.75  Aligned_cols=33  Identities=15%  Similarity=0.342  Sum_probs=29.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|.+
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            67899988 9999999999999999999998754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.97  E-value=0.046  Score=36.31  Aligned_cols=35  Identities=23%  Similarity=0.320  Sum_probs=30.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .+|.++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4578999987 9999999999999999999998753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.89  E-value=0.038  Score=36.24  Aligned_cols=32  Identities=22%  Similarity=0.229  Sum_probs=28.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |.++|.|| |-||.++|..|.+.|.+|.++.++
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45888887 999999999999999999999876

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.89  E-value=0.094  Score=32.98  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=45.2

Q ss_pred             CCCCCEEEEeCCCCchH-HHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEE
Q 031009           77 MLPPYNVLITGSTKGIG-YALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLL  155 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG-~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dil  155 (167)
                      +-..|.+.+.|- +|+| .++|+.|.++|++|...|+......   +.+.+. +- .+  ...+-.    ......+-++
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~-Gi-~v--~~g~~~----~~i~~~d~vV   72 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQA-GA-KI--YIGHAE----EHIEGASVVV   72 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHT-TC-EE--EESCCG----GGGTTCSEEE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHC-CC-eE--EECCcc----ccCCCCCEEE
Confidence            345667888877 5556 6679999999999999998754332   344433 33 22  221111    1123346677


Q ss_pred             EEeccCc
Q 031009          156 VNIYVPS  162 (167)
Q Consensus       156 vN~ai~~  162 (167)
                      +..||+.
T Consensus        73 ~S~AI~~   79 (96)
T d1p3da1          73 VSSAIKD   79 (96)
T ss_dssp             ECTTSCT
T ss_pred             ECCCcCC
Confidence            7777764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.87  E-value=0.038  Score=35.67  Aligned_cols=33  Identities=21%  Similarity=0.376  Sum_probs=29.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++|.|| |-+|.++|..|.+.|++|.++.+.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            56888877 9999999999999999999998753

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.83  E-value=0.061  Score=36.26  Aligned_cols=37  Identities=27%  Similarity=0.227  Sum_probs=29.2

Q ss_pred             CCCCEEEE-eCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           78 LPPYNVLI-TGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        78 l~gk~vlI-TGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ..++.++| -.+++.||.++|..|+++|++|.++.+.+
T Consensus        37 ~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          37 KIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            34455444 45668999999999999999999998764

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.62  E-value=0.26  Score=35.04  Aligned_cols=82  Identities=16%  Similarity=0.099  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVN  157 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN  157 (167)
                      -+|.+|+-.|++.|--.+..-++...+.+|+.++.+++..+...+.++.. +..++.+...|..+.... ...++-++++
T Consensus        74 ~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~-~~~n~~~~~~d~~~~~~~-~~~fD~I~~~  151 (213)
T d1dl5a1          74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-GIENVIFVCGDGYYGVPE-FSPYDVIFVT  151 (213)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGCCGG-GCCEEEEEEC
T ss_pred             cccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh-cccccccccCchHHcccc-ccchhhhhhh
Confidence            35778999998888766655555555678999999998888777777554 333677777776542211 1224555555


Q ss_pred             eccC
Q 031009          158 IYVP  161 (167)
Q Consensus       158 ~ai~  161 (167)
                      .++.
T Consensus       152 ~~~~  155 (213)
T d1dl5a1         152 VGVD  155 (213)
T ss_dssp             SBBS
T ss_pred             ccHH
Confidence            5443

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=93.61  E-value=0.23  Score=34.91  Aligned_cols=61  Identities=18%  Similarity=0.161  Sum_probs=44.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ++.|+=.|++.|.   .+..|+++|++|+.+|.+++.++.+.+.+... +..++.++..|..+..
T Consensus        16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~-~~~~i~~~~~d~~~l~   76 (231)
T d1vl5a_          16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGN-GHQQVEYVQGDAEQMP   76 (231)
T ss_dssp             CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCC-CCC
T ss_pred             cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhccccc-cccccccccccccccc
Confidence            4678888988874   34677889999999999998877665555443 3347889999988754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=93.52  E-value=0.031  Score=41.12  Aligned_cols=37  Identities=14%  Similarity=0.214  Sum_probs=30.8

Q ss_pred             CCCEEEEeCCCCchHHHH-----HHHHHHCCCeEEEEeCChh
Q 031009           79 PPYNVLITGSTKGIGYAL-----AKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        79 ~gk~vlITGas~GIG~ai-----a~~L~~~G~~Vi~~~r~~~  115 (167)
                      .++.++|+.|.||.|+.+     |..|+++|.+|.++|.+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            456677777799999985     7899999999999998754

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=93.48  E-value=0.29  Score=32.89  Aligned_cols=45  Identities=13%  Similarity=0.206  Sum_probs=34.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCC--hhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRS--AERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~--~~~~~~~~~~l~~  126 (167)
                      ++.|.|++|.+|..++..+..+|  .+++++|.+  ++..+....++..
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~   50 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH   50 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhh
Confidence            58899999999999999999998  359999864  3344444455543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.46  E-value=0.05  Score=39.04  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=29.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .++|+|.|| |--|+.+|..|+++|.+|++++++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            357999988 8889999999999999999999864

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.40  E-value=0.051  Score=36.50  Aligned_cols=35  Identities=20%  Similarity=0.142  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCCh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA  114 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~  114 (167)
                      .||+++|.|| |-.|.++|..|.+.|  .+|+++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 889999999999988  4788887664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.37  E-value=0.04  Score=40.28  Aligned_cols=35  Identities=29%  Similarity=0.365  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +.|+|+|.|| |--|+..|..|+++|++|.++.+.+
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3468999988 7789999999999999999998653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=93.35  E-value=0.15  Score=34.41  Aligned_cols=44  Identities=20%  Similarity=0.413  Sum_probs=35.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ++.|.|+ |.+|.+++..++.+|  .+++++|++++..+....+++.
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~   48 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH   48 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHh
Confidence            4667786 999999999999998  3699999999877766666654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.33  E-value=0.15  Score=34.38  Aligned_cols=63  Identities=10%  Similarity=0.024  Sum_probs=43.1

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           77 MLPPYNVLITGSTKG-IGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        77 ~l~gk~vlITGas~G-IG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      .++|+.++=.|++.| +|.+    .+.+|+ +|+.++.+++..+...+.++...-..++.+++.|+.+.
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~   76 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA   76 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccccc
Confidence            467888776666554 5553    455675 79999999988877666665443334688899887654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.28  E-value=0.098  Score=37.49  Aligned_cols=37  Identities=22%  Similarity=0.285  Sum_probs=32.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .-.+|.++|.|| |-.|...|..|+++|++|.++++..
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            456788999988 7889999999999999999998654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.26  E-value=0.069  Score=35.99  Aligned_cols=35  Identities=17%  Similarity=0.164  Sum_probs=28.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD  118 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~  118 (167)
                      +-|.|. |-+|.++++.|+++|++|++.+++.+...
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            445555 99999999999999999999987765443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.23  E-value=0.09  Score=35.56  Aligned_cols=36  Identities=17%  Similarity=0.256  Sum_probs=30.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERV  117 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~  117 (167)
                      ++.|.||+|.+|.+++..|+.+|  .+++++|.++.+.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~   39 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG   39 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch
Confidence            58899999999999999999988  4599999876543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.19  E-value=0.043  Score=39.86  Aligned_cols=31  Identities=23%  Similarity=0.305  Sum_probs=27.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |+|.|| |-.|.++|.+|+++|.+|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788877 8999999999999999999998753

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.18  E-value=0.12  Score=34.67  Aligned_cols=44  Identities=18%  Similarity=0.295  Sum_probs=35.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ++.|.|+ |.+|..++..++.+|  .+++++|++++.++....++..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~   47 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccc
Confidence            4666686 899999999999887  5799999999887766666654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.18  E-value=0.37  Score=35.20  Aligned_cols=34  Identities=29%  Similarity=0.226  Sum_probs=30.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~  111 (167)
                      +++||+++|-|. |-.|..+++.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEee
Confidence            689999999986 9999999999999999988655

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.10  E-value=0.13  Score=34.61  Aligned_cols=44  Identities=14%  Similarity=0.138  Sum_probs=35.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ++.|.|+ |.+|.+++..++.+|  .+++++|++++..+....++..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~   47 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhh
Confidence            4667786 999999999999888  4699999999887766666654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.07  E-value=0.31  Score=32.80  Aligned_cols=44  Identities=20%  Similarity=0.259  Sum_probs=32.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHC-C--CeEEEEeCChhHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKA-G--DNVIICSRSAERVDSAVQSLRE  126 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~-G--~~Vi~~~r~~~~~~~~~~~l~~  126 (167)
                      ++.|+|++|.+|.+++..|+.+ +  .++++.|..+ ..+....++..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h   48 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH   48 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHC
Confidence            5889999999999999988643 4  6799999864 34444445543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.89  E-value=0.067  Score=40.50  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      +.|+++|.|| |--|+.+|..|+++|++|.++..+.
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3688999988 7789999999999999999998654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=92.88  E-value=0.29  Score=33.95  Aligned_cols=73  Identities=22%  Similarity=0.214  Sum_probs=48.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh-hhhhhhccceEEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA-PYNIIYKYSWLLVN  157 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~~~~~~~~~dilvN  157 (167)
                      +..+++|-|+ |=-|+.-++.....|+.|.++|.+.+.++++...+    +. .+...   ..+. ......+.-|++|+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~----~~-~~~~~---~~~~~~l~~~~~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF----GS-RVELL---YSNSAEIETAVAEADLLIG  101 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GG-GSEEE---ECCHHHHHHHHHTCSEEEE
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh----cc-cceee---hhhhhhHHHhhccCcEEEE
Confidence            4457999988 77899999999999999999999998876543332    32 22222   1222 23334444677777


Q ss_pred             ecc
Q 031009          158 IYV  160 (167)
Q Consensus       158 ~ai  160 (167)
                      .+.
T Consensus       102 aal  104 (168)
T d1pjca1         102 AVL  104 (168)
T ss_dssp             CCC
T ss_pred             eee
Confidence            663

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.83  E-value=0.061  Score=35.42  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=30.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .|.++|-|| |-||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            367889988 9999999999999999999997754

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=92.80  E-value=0.066  Score=36.13  Aligned_cols=43  Identities=14%  Similarity=0.169  Sum_probs=31.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChhHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLR  125 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~~~~~~~~~l~  125 (167)
                      ++.|.|+ |.+|..++..++.+|  .+++++|++++..+....++.
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~   47 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDIN   47 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeec
Confidence            3666687 999999999999998  369999999887665555664

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=92.74  E-value=0.21  Score=36.08  Aligned_cols=63  Identities=16%  Similarity=0.089  Sum_probs=45.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ++++||=-|++.|   ..+..|++.| .+|+++|.+++.++.+.+.........++.+.+.|.....
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~   87 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH   87 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhc
Confidence            4678888888776   2345677777 4799999999988877665544333337889999986543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.72  E-value=0.056  Score=38.32  Aligned_cols=34  Identities=18%  Similarity=0.228  Sum_probs=29.9

Q ss_pred             CCEEEEeCCCCchHHH-----HHHHHHHCCCeEEEEeCC
Q 031009           80 PYNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        80 gk~vlITGas~GIG~a-----ia~~L~~~G~~Vi~~~r~  113 (167)
                      ||+|.|+|+.||.|+.     ++..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6889999999999886     667888999999999865

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.61  E-value=0.23  Score=35.36  Aligned_cols=61  Identities=15%  Similarity=0.091  Sum_probs=46.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +++++|=-|++.|   ..+..|+++|++|+++|.+++-++.+.+..... +. ++.+...|+.+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~-~~-~i~~~~~d~~~l~  101 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER-NL-KIEFLQGDVLEIA  101 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CCEEEESCGGGCC
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc-cc-cchheehhhhhcc
Confidence            4567999999877   456778999999999999998777666655443 32 5788888887644

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.60  E-value=0.45  Score=32.83  Aligned_cols=63  Identities=14%  Similarity=0.122  Sum_probs=45.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +.++.++=-|++.|.   .+..|+++|++|+.+|.+++.++.+.+..... +-..+.+...|+.+..
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~d~~~~~   91 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE-GLDNLQTDLVDLNTLT   91 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCTTEEEEECCTTTCC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc-cccchhhhheeccccc
Confidence            345578888886553   56788899999999999998887765554433 3335777888877644

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.34  E-value=0.079  Score=36.89  Aligned_cols=33  Identities=27%  Similarity=0.398  Sum_probs=29.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +|.|-|+ |..|.++|..|++.|++|.++.|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4778877 89999999999999999999998654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.27  E-value=0.14  Score=36.84  Aligned_cols=63  Identities=16%  Similarity=0.080  Sum_probs=48.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ..+++.+|=.|++.|.   ++..|+++|.+|+.+|.+++.++.+.+..... +. ++.++..|+.+..
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~-~~-~v~~~~~d~~~~~   97 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ-GL-KPRLACQDISNLN   97 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-TC-CCEEECCCGGGCC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc-Cc-cceeeccchhhhc
Confidence            3556789999998885   67888999999999999998887665555433 33 5788888887654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.18  E-value=0.12  Score=39.19  Aligned_cols=35  Identities=11%  Similarity=0.227  Sum_probs=31.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~  111 (167)
                      ..++||+++|.|. |-.|..+++.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            3689999999988 8999999999999999988765

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=92.05  E-value=0.042  Score=40.29  Aligned_cols=35  Identities=23%  Similarity=0.401  Sum_probs=28.9

Q ss_pred             CCEEEEeCCCCchHHH-----HHHHHHHCCCeEEEEeCChh
Q 031009           80 PYNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        80 gk~vlITGas~GIG~a-----ia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +|+|.|+| -||.|+.     ++..|++.|++|.++|.+.+
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            36788897 8999987     45689999999999998753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.84  E-value=0.48  Score=32.77  Aligned_cols=60  Identities=13%  Similarity=-0.021  Sum_probs=44.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +.+||=-|++.|.   ++..|++.|++|+++|.+++.++.+.+..... +. .+.++..|..+..
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~-~~-~~~~~~~d~~~l~   97 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-ES-NVEFIVGDARKLS   97 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TC-CCEEEECCTTSCC
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc-cc-ccccccccccccc
Confidence            3468889998885   66788899999999999988887766555443 32 4667777777643

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.76  E-value=0.051  Score=37.98  Aligned_cols=31  Identities=19%  Similarity=0.223  Sum_probs=27.4

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHCCCeEEEEe
Q 031009           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICS  111 (167)
Q Consensus        81 k~vlITGas~GIG~a-----ia~~L~~~G~~Vi~~~  111 (167)
                      |..+|||-+.|.|+.     ++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            689999998899986     6789999999999986

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.56  E-value=0.18  Score=35.95  Aligned_cols=44  Identities=16%  Similarity=0.076  Sum_probs=36.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .+++.||.-|++.|   ..+..|+++|++|+.+|.+++.++.+.++.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            35678999999887   457889999999999999998876655543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.49  E-value=0.1  Score=35.95  Aligned_cols=31  Identities=16%  Similarity=0.225  Sum_probs=27.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      |+|.|+ |--|+..|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788876 7889999999999999999998864

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.33  E-value=0.96  Score=32.24  Aligned_cols=84  Identities=20%  Similarity=0.091  Sum_probs=56.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh----CCceEEEEeccCCChhhhhhhccce
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----GEQHVWVPPSRLVSAPYNIIYKYSW  153 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~d~~~~~~~~~~d  153 (167)
                      -+|..||-.|++.|--.++.-++.....+|+.++++++-++...+.++...    ....+.+...|..+... ....++-
T Consensus        75 ~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~-~~~~fD~  153 (224)
T d1i1na_          75 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA  153 (224)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred             CCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccc-hhhhhhh
Confidence            357799999999998888877788778899999999988877766665421    11246777777654221 1223455


Q ss_pred             EEEEeccCc
Q 031009          154 LLVNIYVPS  162 (167)
Q Consensus       154 ilvN~ai~~  162 (167)
                      ++++.+++.
T Consensus       154 I~~~~~~~~  162 (224)
T d1i1na_         154 IHVGAAAPV  162 (224)
T ss_dssp             EEECSBBSS
T ss_pred             hhhhcchhh
Confidence            566655543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.31  E-value=0.099  Score=38.02  Aligned_cols=30  Identities=20%  Similarity=0.418  Sum_probs=26.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ++|.|| |-.|..+|.+|+++|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            778877 888999999999999999999864

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.28  E-value=0.075  Score=37.63  Aligned_cols=35  Identities=17%  Similarity=0.314  Sum_probs=29.8

Q ss_pred             CCEEEEeCCCCchHHH-----HHHHHHHCCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~a-----ia~~L~~~G~~Vi~~~r~~  114 (167)
                      .|+|.|+++.||.|+.     +|..|++.|.+|.++|-+.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4789999999998876     5678899999999998664

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.13  E-value=0.53  Score=34.50  Aligned_cols=60  Identities=20%  Similarity=0.183  Sum_probs=44.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCC
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLV  141 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~  141 (167)
                      ..+|+.++=.|++.|+   ++..+++.|++|+.+|.+++.++.+.+..+.. +- +..+...|+.
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n-~~-~~~~~~~d~~  177 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN-GV-RPRFLEGSLE  177 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT-TC-CCEEEESCHH
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc-CC-ceeEEecccc
Confidence            4678999999999886   33456778999999999999888776655443 32 4566666654

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=90.81  E-value=1.4  Score=32.45  Aligned_cols=74  Identities=16%  Similarity=0.144  Sum_probs=44.6

Q ss_pred             CEEEEeCCCCc-hHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEe
Q 031009           81 YNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus        81 k~vlITGas~G-IG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ++++-.|+++| |+.++++   ...++|+.+|.+++.++-+.+-.+...-..++.+...|..+.......++ |++|-|
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~~~~~~~f-DlIVsN  186 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASI-EMILSN  186 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTC-CEEEEC
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccccccccCcc-cEEEEc
Confidence            34554444444 5555542   35689999999999887766666543333357778888876543333343 444433

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.68  E-value=0.57  Score=35.07  Aligned_cols=63  Identities=27%  Similarity=0.196  Sum_probs=43.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .+||+|+--|++.|+   ++..++++|+ +|+.++.++. .....+......-..++.++..|+.+.+
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~   95 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE   95 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc
Confidence            578999999998885   4566778885 6999998754 4433333333333336888888887754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.68  E-value=0.12  Score=37.99  Aligned_cols=30  Identities=27%  Similarity=0.483  Sum_probs=26.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCC-eEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~  113 (167)
                      |+|.|| |-+|.++|.+|+++|. +|.+++++
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            788887 8999999999999996 69999875

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.65  E-value=0.28  Score=34.55  Aligned_cols=78  Identities=21%  Similarity=0.177  Sum_probs=54.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhh--h--hhccceEEE
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYN--I--IYKYSWLLV  156 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~--~--~~~~~dilv  156 (167)
                      .++=+|-|+||...++.+.+ . +.+|+++|++++.++...+.+.. .+. ++.++..+..+....  .  ...++-++.
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-~~~-r~~~~~~~f~~~~~~~~~~~~~~vdgIl~  101 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-FSD-RVSLFKVSYREADFLLKTLGIEKVDGILM  101 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-GTT-TEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-ccc-cccchhHHHhhHHHHHHHcCCCCcceeee
Confidence            34667888899988888876 3 47899999999988776665543 233 688888888765422  1  123467777


Q ss_pred             EeccCc
Q 031009          157 NIYVPS  162 (167)
Q Consensus       157 N~ai~~  162 (167)
                      +.++.+
T Consensus       102 DlGvSs  107 (192)
T d1m6ya2         102 DLGVST  107 (192)
T ss_dssp             ECSCCH
T ss_pred             ccchhH
Confidence            777643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.60  E-value=0.15  Score=37.73  Aligned_cols=34  Identities=21%  Similarity=0.316  Sum_probs=30.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEe
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS  111 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~  111 (167)
                      .++||+++|.|. |-.|..+++.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEe
Confidence            689999999985 8999999999999999987653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=90.40  E-value=0.7  Score=32.58  Aligned_cols=62  Identities=24%  Similarity=0.202  Sum_probs=46.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +|.+||=-|++.|.   ++..|++.|.+|+.+|.+++.++.+.+.+... +..++.+++.|+.+..
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~-~~~~~~~~~~d~~~~~   77 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEK-GVENVRFQQGTAESLP   77 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH-TCCSEEEEECBTTBCC
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccc-cccccccccccccccc
Confidence            46678889998884   45677788999999999998877665555544 3336889999987643

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=90.17  E-value=0.64  Score=34.00  Aligned_cols=65  Identities=15%  Similarity=0.250  Sum_probs=47.6

Q ss_pred             CCCCEEEEeCCCCc-hHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           78 LPPYNVLITGSTKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        78 l~gk~vlITGas~G-IG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      -+|.+|+=.|+++| +...+++.+.. +.+|+.++++++.++.+.+.++......++.+...|+.+.
T Consensus        84 ~pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~  149 (250)
T d1yb2a1          84 RPGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF  149 (250)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC
T ss_pred             CCcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc
Confidence            46788888888877 34555555433 4589999999998888877776544445788888998764

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.06  E-value=0.82  Score=34.29  Aligned_cols=63  Identities=21%  Similarity=0.128  Sum_probs=43.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .+||+|+-.|++.|+   ++..++++|+ +|++++.++ .++.+.+..+......++.++..|+.+..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~  100 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH  100 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc
Confidence            578999999998884   4566778886 699999775 34333333433333346888988887654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.98  E-value=1.7  Score=28.66  Aligned_cols=64  Identities=13%  Similarity=0.071  Sum_probs=48.5

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHCCCeEEEEeC----------------------------ChhHHHHHHHHHHHH
Q 031009           79 PPYNVLITGST---KGIGYALAKEFLKAGDNVIICSR----------------------------SAERVDSAVQSLREE  127 (167)
Q Consensus        79 ~gk~vlITGas---~GIG~aia~~L~~~G~~Vi~~~r----------------------------~~~~~~~~~~~l~~~  127 (167)
                      +.|.+.|.|+|   +..|..+++.|.+.|++|+.+..                            ..+...+.++++.+.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp~~~~~~~~~e~~~~   97 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKK   97 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeCHHHHHHHHHHHHHh
Confidence            57889999998   57999999999999999888642                            234566677777655


Q ss_pred             hCCceEEEEeccCCChh
Q 031009          128 FGEQHVWVPPSRLVSAP  144 (167)
Q Consensus       128 ~~~~~~~~~~~Dv~d~~  144 (167)
                       +. +..+++....+++
T Consensus        98 -g~-k~v~~~~G~~~ee  112 (139)
T d2d59a1          98 -GA-KVVWFQYNTYNRE  112 (139)
T ss_dssp             -TC-SEEEECTTCCCHH
T ss_pred             -CC-CEEEEeccccCHH
Confidence             44 5677777777766

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.86  E-value=0.87  Score=31.14  Aligned_cols=61  Identities=13%  Similarity=0.068  Sum_probs=44.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      +|.+++=.|++.|   .++..+++.+.+|+.+|.+++.++...+.++...-..++.++.+|..+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE   93 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh
Confidence            5667877888777   334556777889999999999888877777654322368888887643

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.80  E-value=0.78  Score=32.14  Aligned_cols=64  Identities=22%  Similarity=0.128  Sum_probs=44.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      ..+++|++++=-|++.|.   ++..++..| .+|+.++.+++.++.+.+.++.. +. +..++..|+.+.
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~-~~-~~~~~~~d~~~~  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF-KG-KFKVFIGDVSEF  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG-TT-SEEEEESCGGGC
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc-CC-CceEEECchhhh
Confidence            447899999888887762   233445677 47999999998887666655433 33 577777776543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.79  E-value=0.13  Score=42.00  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=29.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCC-CeEEEEeC
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSR  112 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G-~~Vi~~~r  112 (167)
                      +...+|+|.|+ ||+|.++++-|+..| .++.++|.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            55668999987 899999999999999 57888874

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.57  E-value=0.28  Score=35.07  Aligned_cols=31  Identities=29%  Similarity=0.338  Sum_probs=26.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      ++|+|.|| |=-|+..|..|.++|++|.++-.
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            45889988 77899999999999999999854

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.57  E-value=0.11  Score=38.48  Aligned_cols=35  Identities=26%  Similarity=0.403  Sum_probs=29.1

Q ss_pred             CCEEEEeCCCCchHHH-----HHHHHHHCCCeEEEEeCChh
Q 031009           80 PYNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        80 gk~vlITGas~GIG~a-----ia~~L~~~G~~Vi~~~r~~~  115 (167)
                      +|++.|.| -||.|+.     ++..|++.|.+|.++|-+++
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            46788887 8999987     57889999999999998753

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.32  E-value=0.22  Score=34.61  Aligned_cols=35  Identities=20%  Similarity=0.350  Sum_probs=27.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHH
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS  119 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~  119 (167)
                      +.|.| .|-+|+.+|..| ++|++|++.|.+++..++
T Consensus         3 I~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~   37 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDK   37 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHH
Confidence            45556 599999999766 479999999999876543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.13  E-value=0.25  Score=36.44  Aligned_cols=33  Identities=18%  Similarity=0.283  Sum_probs=23.0

Q ss_pred             CEEEEeCCC-Cch---HHHHHHHHHHCCCeEEEEeCC
Q 031009           81 YNVLITGST-KGI---GYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        81 k~vlITGas-~GI---G~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |+|+|++|+ ||-   ..+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            456665544 343   456889999999999877643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.72  E-value=0.19  Score=33.87  Aligned_cols=31  Identities=26%  Similarity=0.169  Sum_probs=25.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEE
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIIC  110 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~  110 (167)
                      .++.|+|.|| |.+|.++|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            3567899888 999999999999999775443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=88.62  E-value=0.79  Score=31.23  Aligned_cols=57  Identities=16%  Similarity=0.117  Sum_probs=34.9

Q ss_pred             CCCEEEEeCC-CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEecc
Q 031009           79 PPYNVLITGS-TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSR  139 (167)
Q Consensus        79 ~gk~vlITGa-s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  139 (167)
                      +|+.++=-|+ +|++|.    +.+.+|++|+.++.+++..+.+.+.++...-..++....+|
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d   98 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE   98 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH
T ss_pred             CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh
Confidence            4555554444 444543    45567999999999998887776666554333244444443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.13  E-value=0.21  Score=35.33  Aligned_cols=31  Identities=26%  Similarity=0.407  Sum_probs=27.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      .|+|.|| |--|+..|.+|+++|++|.++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            3788887 778999999999999999999764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=88.11  E-value=1.4  Score=31.91  Aligned_cols=63  Identities=11%  Similarity=0.024  Sum_probs=44.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      +|.+||=.|++.|.   .+..|+++ |++|+.++.++..++...+.....+-..++.+..+|..+..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~  130 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP  130 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc
Confidence            56788888887773   45556654 88999999998877766555544432336889999987754

>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein YNL200c (YNU0 YEAST)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.89  E-value=0.36  Score=35.23  Aligned_cols=32  Identities=22%  Similarity=0.271  Sum_probs=24.7

Q ss_pred             CEEEEeCC--CCchHHHHHHHHHHCCCeEEEEeC
Q 031009           81 YNVLITGS--TKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        81 k~vlITGa--s~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      ++.++.|-  .||=|+.+++.|.++|++|.++..
T Consensus        57 ~vlil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~   90 (243)
T d1jzta_          57 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYP   90 (243)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred             eEEEEECCCCccHHHHHHHHHHHhcCCeeEEEEe
Confidence            35666654  478999999999999999777654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.89  E-value=0.14  Score=32.35  Aligned_cols=37  Identities=16%  Similarity=0.193  Sum_probs=31.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      .++||.|+|.|+ |--|..++..|++.+.++++..|..
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            688999999998 5778899999999888877776654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.86  E-value=1.8  Score=30.37  Aligned_cols=63  Identities=14%  Similarity=0.125  Sum_probs=43.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      -+|.+|+=.|++.|.-......+...| +|+.+|.+++.++.+.+..+.. +  ++.++..|..+..
T Consensus        55 kpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~--ni~~i~~d~~~~~  117 (209)
T d1nt2a_          55 RGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-N--NIIPLLFDASKPW  117 (209)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-S--SEEEECSCTTCGG
T ss_pred             CCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-C--CceEEEeeccCcc
Confidence            457789999999885433333333344 8999999998887765554332 2  5888888888765

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.70  E-value=0.82  Score=28.00  Aligned_cols=42  Identities=24%  Similarity=0.302  Sum_probs=30.1

Q ss_pred             EEEEeCCCCchHH-HHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHH
Q 031009           82 NVLITGSTKGIGY-ALAKEFLKAGDNVIICSRSAERVDSAVQSLREE  127 (167)
Q Consensus        82 ~vlITGas~GIG~-aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~  127 (167)
                      ++-+.|- +|+|- ++|+.|.++|+.|...|+.+....   +.|++.
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t---~~L~~~   45 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERT---AYLRKL   45 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHHHHT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhH---HHHHHC
Confidence            4556665 56665 689999999999999999865433   445554

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.56  E-value=1.4  Score=31.44  Aligned_cols=83  Identities=18%  Similarity=0.178  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-CC----CeEEEEeCChhHHHHHHHHHHHH----hCCceEEEEeccCCChhhhhhh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLK-AG----DNVIICSRSAERVDSAVQSLREE----FGEQHVWVPPSRLVSAPYNIIY  149 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~-~G----~~Vi~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dv~d~~~~~~~  149 (167)
                      +|..||..|+++|--.++.-+++. .|    .+|+.++++++-.+...+.+...    .+..++.+...|..+... ...
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~-~~~  158 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP-PNA  158 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-GGC
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc-ccc
Confidence            578999999999988877776654 44    48999999987666554443221    122258888888765322 223


Q ss_pred             ccceEEEEeccCc
Q 031009          150 KYSWLLVNIYVPS  162 (167)
Q Consensus       150 ~~~dilvN~ai~~  162 (167)
                      .++-++++.+++.
T Consensus       159 ~fD~Iiv~~a~~~  171 (223)
T d1r18a_         159 PYNAIHVGAAAPD  171 (223)
T ss_dssp             SEEEEEECSCBSS
T ss_pred             ceeeEEEEeechh
Confidence            4566777776653

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.25  E-value=0.29  Score=34.63  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=27.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      ++|.|| |--|...|..|+++|.+|+++++..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            778887 6789999999999999999998754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.17  E-value=0.31  Score=35.84  Aligned_cols=30  Identities=30%  Similarity=0.570  Sum_probs=26.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |+|.|+ |..|...|.+++++|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            788887 889999999999999999998764

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=87.08  E-value=1.7  Score=30.70  Aligned_cols=63  Identities=16%  Similarity=0.025  Sum_probs=44.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      -+|+.|+=.|++.|   .++..|++ .|++|+.+|.++..++...+.....+-..++.+...|+.+.
T Consensus        32 ~pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~   95 (245)
T d1nkva_          32 KPGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY   95 (245)
T ss_dssp             CTTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred             CCCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc
Confidence            45778888898777   24555655 48999999999887776555444433233588999998764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=86.27  E-value=0.78  Score=32.31  Aligned_cols=59  Identities=17%  Similarity=0.165  Sum_probs=41.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        75 ~~~l~gk~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      ..+++||+|+=-|++.|+   ++..++..|+ +|+.+|.+++.++...+.     .. ++.++..|+.+
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N-----~~-~~~~~~~D~~~  103 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN-----CG-GVNFMVADVSE  103 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH-----CT-TSEEEECCGGG
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc-----cc-cccEEEEehhh
Confidence            347899999999998883   3345666774 699999998766543222     12 46778888764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.15  E-value=0.38  Score=35.04  Aligned_cols=30  Identities=30%  Similarity=0.378  Sum_probs=25.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |+|.|| |--|+..|.+|+++|++|.++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            677877 677999999999999999998753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=86.02  E-value=0.38  Score=32.85  Aligned_cols=32  Identities=25%  Similarity=0.408  Sum_probs=26.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA  114 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~  114 (167)
                      .|+|.|| |--|+..|..|.++|. +|.++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            3788887 7789999999999996 699988754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=85.92  E-value=0.57  Score=29.65  Aligned_cols=34  Identities=26%  Similarity=0.307  Sum_probs=27.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH---CCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~---~G~~Vi~~~r~~  114 (167)
                      .|.++|.|| |.+|.++|..|.+   .|.+|.++.+.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            367899988 8999999987665   488999988754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.69  E-value=0.69  Score=33.65  Aligned_cols=34  Identities=32%  Similarity=0.398  Sum_probs=28.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEe
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICS  111 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~  111 (167)
                      .++||+++|-|. |-.|..+++.|+++ |++|+.+.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            589999999988 77999999999864 88877654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.65  E-value=0.34  Score=35.09  Aligned_cols=33  Identities=30%  Similarity=0.379  Sum_probs=29.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      .|+|.|| |=-|+.+|..|.++|.+|.++++.++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3888888 58899999999999999999998753

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.86  E-value=0.43  Score=34.19  Aligned_cols=32  Identities=22%  Similarity=0.363  Sum_probs=28.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCChh
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAE  115 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~  115 (167)
                      ++|.|| |--|+..|..|+++|.+|.++++.+.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            788887 88899999999999999999998754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.84  E-value=0.5  Score=30.06  Aligned_cols=34  Identities=29%  Similarity=0.412  Sum_probs=26.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH---CCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLK---AGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~---~G~~Vi~~~r~~  114 (167)
                      .|.++|.|| |.+|.++|..|.+   +|.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            357889988 9999999976655   456799988754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.72  E-value=0.62  Score=34.71  Aligned_cols=36  Identities=25%  Similarity=0.336  Sum_probs=29.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCC--CeEEEEeCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAE  115 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G--~~Vi~~~r~~~  115 (167)
                      ..|.|+|.|| |--|+.+|..|+++|  .+|+++.++..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            3468999988 777889999999877  58999988753

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=84.41  E-value=2.6  Score=30.98  Aligned_cols=72  Identities=19%  Similarity=0.117  Sum_probs=47.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEEe
Q 031009           81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVNI  158 (167)
Q Consensus        81 k~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN~  158 (167)
                      ++.-+--|+|.||.+++..+  ...+|+.+|.+++.++-+.+..+.. +-.++.+++.|+.+...   ....|++|-|
T Consensus       111 ~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~-~~~~v~~~~~d~~~~~~---~~~fDlIvsN  182 (274)
T d2b3ta1         111 RILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHL-AIKNIHILQSDWFSALA---GQQFAMIVSN  182 (274)
T ss_dssp             EEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHH-TCCSEEEECCSTTGGGT---TCCEEEEEEC
T ss_pred             ceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHh-CcccceeeecccccccC---CCceeEEEec
Confidence            34444445566777776654  3578999999999888776666544 33368999999876431   1235666655

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.39  E-value=0.37  Score=35.71  Aligned_cols=32  Identities=25%  Similarity=0.378  Sum_probs=27.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEEEeCCh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~  114 (167)
                      -++|.|| |--|+.+|+.|+++|.+|.++.++.
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4788887 8889999999999999999998654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.13  E-value=1.4  Score=32.22  Aligned_cols=63  Identities=16%  Similarity=0.074  Sum_probs=43.5

Q ss_pred             CCCCEEEEeCCCCc-hHHHHHHHHHHCC-CeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           78 LPPYNVLITGSTKG-IGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        78 l~gk~vlITGas~G-IG~aia~~L~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      -+|++++-.|++.| ++..++    +.| ++|+.++.+++..+.+.+.++...-..++.++..|..+..
T Consensus       106 ~~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~  170 (260)
T d2frna1         106 KPDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP  170 (260)
T ss_dssp             CTTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred             CCccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc
Confidence            36888888887654 444443    345 6899999999988777666654332335889999987643

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=84.09  E-value=0.55  Score=34.05  Aligned_cols=33  Identities=24%  Similarity=0.441  Sum_probs=26.5

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHCCCeEEEEeCCh
Q 031009           81 YNVLITGSTKGIGYA-----LAKEFLKAGDNVIICSRSA  114 (167)
Q Consensus        81 k~vlITGas~GIG~a-----ia~~L~~~G~~Vi~~~r~~  114 (167)
                      |.++++| -||.|+.     +|..|+++|.+|.++|-++
T Consensus         9 ~~i~~sG-KGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp   46 (296)
T d1ihua1           9 PYLFFTG-KGGVGKTSISCATAIRLAEQGKRVLLVSTDP   46 (296)
T ss_dssp             SEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             eEEEEEC-CCcChHHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4566665 7998887     6789999999999998774

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=84.08  E-value=2.7  Score=29.87  Aligned_cols=78  Identities=15%  Similarity=0.013  Sum_probs=49.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChhhhhhhccceEEEE
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAPYNIIYKYSWLLVN  157 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~~~~~~~~dilvN  157 (167)
                      -+|.+||-.|++.|--.+   .|++.+.+|+.++++++..+...+.+. .  ..++.+...|...... ....++-++++
T Consensus        69 ~~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~--~~nv~~~~~d~~~g~~-~~~pfD~Iiv~  141 (224)
T d1vbfa_          69 HKGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-Y--YNNIKLILGDGTLGYE-EEKPYDRVVVW  141 (224)
T ss_dssp             CTTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-T--CSSEEEEESCGGGCCG-GGCCEEEEEES
T ss_pred             cccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-c--ccccccccCchhhcch-hhhhHHHHHhh
Confidence            356789999998885443   455567899999999887765544332 2  2368888888654221 12335666777


Q ss_pred             eccCc
Q 031009          158 IYVPS  162 (167)
Q Consensus       158 ~ai~~  162 (167)
                      .+++.
T Consensus       142 ~a~~~  146 (224)
T d1vbfa_         142 ATAPT  146 (224)
T ss_dssp             SBBSS
T ss_pred             cchhh
Confidence            66554

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.79  E-value=0.79  Score=29.95  Aligned_cols=28  Identities=21%  Similarity=0.430  Sum_probs=25.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCCeEEE
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGDNVII  109 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~~Vi~  109 (167)
                      ++.|.|++|-.|+++++.+.+.|+.++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~   29 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVL   29 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEE
Confidence            4899999999999999999999988664

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.77  E-value=0.48  Score=35.11  Aligned_cols=30  Identities=40%  Similarity=0.535  Sum_probs=26.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |+|.|+ |.-|...|..|+++|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788877 888999999999999999999764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=83.76  E-value=0.17  Score=33.73  Aligned_cols=36  Identities=17%  Similarity=0.068  Sum_probs=25.5

Q ss_pred             CCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           89 TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        89 s~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .|-+|+++++.|.+.+..+.+++|+.++.+++.++.
T Consensus         7 ~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           7 TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            478999999988664444568999999887776654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.19  E-value=0.83  Score=30.66  Aligned_cols=34  Identities=21%  Similarity=0.360  Sum_probs=26.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCe-EEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~-Vi~~~r~~  114 (167)
                      ++.++|.|| |..|...|..+.++|++ |+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            344777766 88999999999999976 77777653

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.03  E-value=3.6  Score=27.89  Aligned_cols=62  Identities=11%  Similarity=0.107  Sum_probs=43.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHh-CCceEEEEeccCCC
Q 031009           78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF-GEQHVWVPPSRLVS  142 (167)
Q Consensus        78 l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~d  142 (167)
                      .++++|+=.|++.|   .++..+++.+.+|++++.++...+.+.+.++... ...++.+...|+.+
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~  113 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE  113 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh
Confidence            35667887777766   3445667778899999999888776665554432 12258888889865

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.74  E-value=0.84  Score=29.77  Aligned_cols=34  Identities=24%  Similarity=0.205  Sum_probs=27.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH----CCCeEEEEeCCh
Q 031009           80 PYNVLITGSTKGIGYALAKEFLK----AGDNVIICSRSA  114 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~----~G~~Vi~~~r~~  114 (167)
                      +|.++|.|| |.+|.++|..|++    .|.+|.++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            567888877 9999999988863    588999887643

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.58  E-value=0.9  Score=32.86  Aligned_cols=34  Identities=21%  Similarity=0.171  Sum_probs=29.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEEEe
Q 031009           77 MLPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICS  111 (167)
Q Consensus        77 ~l~gk~vlITGas~GIG~aia~~L~~-~G~~Vi~~~  111 (167)
                      +++||+++|-|. |-.|..+++.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEee
Confidence            688999999975 9999999999975 599988765

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=82.46  E-value=1.3  Score=30.97  Aligned_cols=66  Identities=15%  Similarity=0.120  Sum_probs=44.7

Q ss_pred             CCCEEEEeCCCCch-HHHHHHHHHHCCCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           79 PPYNVLITGSTKGI-GYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        79 ~gk~vlITGas~GI-G~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      ++.+++=-|++.|- ...+++.+...|++|+.+|.+++-++.+.+.+........+.+...|..+..
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~  105 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVE  105 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCC
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccc
Confidence            35578888887774 3344444444689999999999888877666654433446777777776543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.19  E-value=1.1  Score=30.96  Aligned_cols=37  Identities=14%  Similarity=0.243  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        76 ~~l~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ..++||.|+|.|+ |--|..+|.++++.+++++.+.|.
T Consensus        28 ~~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECC-CccHHHHHHHHHhhhccccccccc
Confidence            3689999999988 556899999999999998877654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.95  E-value=1.1  Score=31.39  Aligned_cols=62  Identities=19%  Similarity=0.071  Sum_probs=42.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHC-CCeEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCChh
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSAP  144 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~  144 (167)
                      .++.++=.|++.|.   .+..|++. +.+|+++|.+++.++.+.+.+... +...+.+.+.|+.+..
T Consensus        60 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~-~~~~~~f~~~d~~~~~  122 (222)
T d2ex4a1          60 GTSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE-GKRVRNYFCCGLQDFT  122 (222)
T ss_dssp             CCSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG-GGGEEEEEECCGGGCC
T ss_pred             CCCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhccccccccc-cccccccccccccccc
Confidence            34578888887663   44555544 468999999998887765555433 2336788888887643

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.79  E-value=0.58  Score=34.67  Aligned_cols=30  Identities=33%  Similarity=0.575  Sum_probs=26.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |+|.|+ |..|+..|.+++++|.+|+++.+.
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788877 889999999999999999998753

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.36  E-value=0.99  Score=31.74  Aligned_cols=32  Identities=28%  Similarity=0.345  Sum_probs=27.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHCCC-eEEEEeCCh
Q 031009           82 NVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA  114 (167)
Q Consensus        82 ~vlITGas~GIG~aia~~L~~~G~-~Vi~~~r~~  114 (167)
                      .|+|.|| |--|+.+|..|.++|. +|.++.+..
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            4888888 7779999999999994 898988754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.25  E-value=0.73  Score=34.26  Aligned_cols=30  Identities=20%  Similarity=0.243  Sum_probs=26.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      |+|.|| |--|++++.+|.++|.+|+++++.
T Consensus        10 V~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1          10 VLVVGA-GFSGLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-cHHHHHHHHHHHhCCCCEEEEEcC
Confidence            888888 788999999999999999999864

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=80.80  E-value=0.86  Score=34.06  Aligned_cols=29  Identities=14%  Similarity=0.092  Sum_probs=25.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      |+|.|+ |--|..+|.+|+++|.+|.++.+
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEec
Confidence            677766 77789999999999999999876

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=80.63  E-value=4.8  Score=26.08  Aligned_cols=78  Identities=8%  Similarity=0.026  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCC---chHHHHHHHHHHCCCeEEEEe------------------------------CChhHHHHHHHHHH
Q 031009           79 PPYNVLITGSTK---GIGYALAKEFLKAGDNVIICS------------------------------RSAERVDSAVQSLR  125 (167)
Q Consensus        79 ~gk~vlITGas~---GIG~aia~~L~~~G~~Vi~~~------------------------------r~~~~~~~~~~~l~  125 (167)
                      +.|.+.|.|+|.   ..|..+.+.|.+.|++++.+.                              +..+...+.++++.
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v~~p~~~v~~~v~~~~   91 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVL   91 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCHHHHTTTHHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEEeccHHHHHHHHHHHH
Confidence            567899999985   699999999999999887763                              22233445556655


Q ss_pred             HHhCCceEEEEeccCCChh-hhhhhcc-ceEEEEe
Q 031009          126 EEFGEQHVWVPPSRLVSAP-YNIIYKY-SWLLVNI  158 (167)
Q Consensus       126 ~~~~~~~~~~~~~Dv~d~~-~~~~~~~-~dilvN~  158 (167)
                      +. +. +..+++....+++ .+.+.+. ..++-|+
T Consensus        92 ~~-g~-k~i~~q~G~~~~e~~~~a~~~Gi~vV~~~  124 (136)
T d1iuka_          92 AL-RP-GLVWLQSGIRHPEFEKALKEAGIPVVADR  124 (136)
T ss_dssp             HH-CC-SCEEECTTCCCHHHHHHHHHTTCCEEESC
T ss_pred             hh-CC-CeEEEecCccCHHHHHHHHHcCCEEEcCC
Confidence            44 44 4667777887776 3333333 4555544

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.43  E-value=4.9  Score=27.25  Aligned_cols=63  Identities=10%  Similarity=0.011  Sum_probs=42.7

Q ss_pred             CCCCCEEEE-eCCCCchHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCCh
Q 031009           77 MLPPYNVLI-TGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVSA  143 (167)
Q Consensus        77 ~l~gk~vlI-TGas~GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~  143 (167)
                      .++|+.++= -.|+|++|.+.    +.+|+ +|+.++.+.+..+-+.+.++......++.++..|+.+.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~~  103 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA  103 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred             hcCCCEEEEccccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchhh
Confidence            467777664 44455577654    45786 59999999988877766665543333688888887653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.42  E-value=2.8  Score=30.36  Aligned_cols=43  Identities=16%  Similarity=0.108  Sum_probs=34.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeCChhHHHHHHHHH
Q 031009           79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL  124 (167)
Q Consensus        79 ~gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r~~~~~~~~~~~l  124 (167)
                      .++.||=.|++.|.   ++..|+++|++|+.+|.+++.++.+.+..
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~   98 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKER   98 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHH
Confidence            46789999998874   56778889999999999998776655444

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.20  E-value=0.92  Score=31.26  Aligned_cols=30  Identities=13%  Similarity=0.119  Sum_probs=27.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHCCCeEEEEeCC
Q 031009           83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS  113 (167)
Q Consensus        83 vlITGas~GIG~aia~~L~~~G~~Vi~~~r~  113 (167)
                      ++|.|| |-.|.+.|..+++.|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            678887 889999999999999999999875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=80.13  E-value=1.6  Score=29.35  Aligned_cols=32  Identities=25%  Similarity=0.298  Sum_probs=26.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHC--CCeEEEEe
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKA--GDNVIICS  111 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~--G~~Vi~~~  111 (167)
                      .|.+.|-|++|.||.....-+.+.  .++|+.+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~ls   35 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALT   35 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEE
Confidence            478999999999999998887765  47777654

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=80.11  E-value=1.8  Score=29.57  Aligned_cols=61  Identities=13%  Similarity=0.066  Sum_probs=40.4

Q ss_pred             CCCCCEEEEeCCCC-chHHHHHHHHHHCCC-eEEEEeCChhHHHHHHHHHHHHhCCceEEEEeccCCC
Q 031009           77 MLPPYNVLITGSTK-GIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWVPPSRLVS  142 (167)
Q Consensus        77 ~l~gk~vlITGas~-GIG~aia~~L~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d  142 (167)
                      .+.+++++=.+++. .+|.    +.+.+|+ +|+.++.+.+..+-+.+.++.. +..+..++..|+.+
T Consensus        41 ~~~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~-~~~~~~ii~~d~~~  103 (183)
T d2fpoa1          41 VIVDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATL-KAGNARVVNSNAMS  103 (183)
T ss_dssp             HHTTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHT-TCCSEEEECSCHHH
T ss_pred             ccchhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhc-cccceeeeeecccc
Confidence            35677666555544 4544    4455786 6999999998888777766543 33467777777654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=80.04  E-value=0.48  Score=32.30  Aligned_cols=32  Identities=25%  Similarity=0.268  Sum_probs=27.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHCCCeEEEEeC
Q 031009           80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR  112 (167)
Q Consensus        80 gk~vlITGas~GIG~aia~~L~~~G~~Vi~~~r  112 (167)
                      ++.++|.|| |-.|...|..+++.|.+|+++++
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~   36 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITG   36 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEe
Confidence            456888888 67999999999999999999875