Query 031010
Match_columns 167
No_of_seqs 40 out of 42
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 12:20:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031010.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031010hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1smba_ d.111.1.1 (A:) Golgi-a 78.3 0.32 2.4E-05 33.7 1.1 36 6-41 7-42 (149)
2 d1cfea_ d.111.1.1 (A:) Pathoge 45.9 5.3 0.00038 27.0 2.2 37 7-43 5-41 (135)
3 d1smra_ b.50.1.2 (A:) Chymosin 21.7 22 0.0016 26.0 2.2 35 89-131 3-37 (335)
4 d1qnxa_ d.111.1.1 (A:) Insect 18.9 21 0.0016 25.1 1.6 48 4-51 44-110 (209)
5 d1uwva1 b.40.4.12 (A:15-74) rR 18.8 16 0.0012 22.0 0.7 20 108-127 8-27 (60)
6 d1rc9a1 d.111.1.1 (A:1-164) Cy 17.6 20 0.0015 24.4 1.1 38 6-43 15-57 (164)
7 d1c0aa2 d.74.4.1 (A:288-420) P 16.9 21 0.0015 24.6 1.1 45 55-105 1-49 (133)
8 d1wkta_ b.11.1.2 (A:) Yeast ki 16.9 21 0.0016 24.0 1.0 22 113-134 26-47 (88)
9 d1r4xa2 d.105.1.2 (A:763-873) 15.9 26 0.0019 24.2 1.3 55 34-91 38-101 (111)
10 g1lya.1 b.50.1.2 (A:,B:) Cathe 15.7 34 0.0025 24.3 2.0 31 94-132 6-36 (338)
No 1
>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.34 E-value=0.32 Score=33.68 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=26.9
Q ss_pred hhHHhhhhhhhhhhcCCCccccCCCCcccHHHHHHH
Q 031010 6 EDNLLQGINSFRTSLGIPVLTKHKKAACLADEVAED 41 (167)
Q Consensus 6 Ed~Ll~~iN~YR~slnLp~L~kN~kA~ClA~eiA~~ 41 (167)
++++|+..|.||+..++|+|+=++.-+=.|...|++
T Consensus 7 ~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~ 42 (149)
T d1smba_ 7 HNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEA 42 (149)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHh
Confidence 577999999999999999999887533344444433
No 2
>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}
Probab=45.89 E-value=5.3 Score=27.05 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=31.5
Q ss_pred hHHhhhhhhhhhhcCCCccccCCCCcccHHHHHHHcC
Q 031010 7 DNLLQGINSFRTSLGIPVLTKHKKAACLADEVAEDLE 43 (167)
Q Consensus 7 d~Ll~~iN~YR~slnLp~L~kN~kA~ClA~eiA~~~~ 43 (167)
+++|.-=|.||+..++|+|+=++.-.=.|.+-|++..
T Consensus 5 q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~ 41 (135)
T d1cfea_ 5 QDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRA 41 (135)
T ss_dssp HHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHh
Confidence 4689999999999999999998877777777888764
No 3
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.66 E-value=22 Score=25.98 Aligned_cols=35 Identities=34% Similarity=0.670 Sum_probs=27.6
Q ss_pred CCccccccccchhhhhhcccCCCcccccccCCCceEEEEEecc
Q 031010 89 LVPTLVLTNYTHSSYAQYLNNSKFAGAGVGSEDDWMVVVLTTN 131 (167)
Q Consensus 89 l~~~~vltNyT~S~y~~yLNdSkytg~GiGsed~WmVvVLtTn 131 (167)
+++.+.|+||-..+| |+-|.||+....+-|++-|-
T Consensus 3 ~~~~~~l~n~~~~~Y--------~~~i~iGtP~Q~~~l~~DTG 37 (335)
T d1smra_ 3 LISPVVLTNYLNSQY--------YGEIGIGTPPQTFKVIFDTG 37 (335)
T ss_dssp BCEEEEEEEETTTEE--------EEEEEETTTTEEEEEEEETT
T ss_pred cccceeecccCCCEE--------EEEEEECCCCeEEEEEEECC
Confidence 567788999877766 34589999999998888773
No 4
>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}
Probab=18.86 E-value=21 Score=25.10 Aligned_cols=48 Identities=21% Similarity=0.392 Sum_probs=29.1
Q ss_pred chhhHHhhhhhhhhhhc-----------CCCc------cccCCCCcccHHHHHHHcCC--CCccccC
Q 031010 4 DDEDNLLQGINSFRTSL-----------GIPV------LTKHKKAACLADEVAEDLED--QPCTSIN 51 (167)
Q Consensus 4 d~Ed~Ll~~iN~YR~sl-----------nLp~------L~kN~kA~ClA~eiA~~~~~--qpCt~~t 51 (167)
++...+|+..|.||..+ .+|+ |+=++.-+=+|...|++-.. .+|.++.
T Consensus 44 ~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a~~C~~~~~~~~~~~ 110 (209)
T d1qnxa_ 44 QEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVA 110 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTTCCCSCCSCCCCS
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHHhhcccCCCcccCCC
Confidence 34478999999999763 2443 55555545556666665432 3665543
No 5
>d1uwva1 b.40.4.12 (A:15-74) rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=18.81 E-value=16 Score=22.02 Aligned_cols=20 Identities=20% Similarity=0.328 Sum_probs=15.9
Q ss_pred cCCCcccccccCCCceEEEE
Q 031010 108 NNSKFAGAGVGSEDDWMVVV 127 (167)
Q Consensus 108 NdSkytg~GiGsed~WmVvV 127 (167)
.|=-+.|-|||.-|+|.|+|
T Consensus 8 ~~l~~~G~Gv~r~~g~vvfV 27 (60)
T d1uwva1 8 NDLDSFGQGVARHNGKTLFI 27 (60)
T ss_dssp EEECTTSEEEEEETTEEEEE
T ss_pred EECCCCCcEEEEECCEEEEE
Confidence 34457899999999998777
No 6
>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}
Probab=17.58 E-value=20 Score=24.40 Aligned_cols=38 Identities=21% Similarity=0.112 Sum_probs=27.4
Q ss_pred hhHHhhhhhhhhhhcCCCc-----cccCCCCcccHHHHHHHcC
Q 031010 6 EDNLLQGINSFRTSLGIPV-----LTKHKKAACLADEVAEDLE 43 (167)
Q Consensus 6 Ed~Ll~~iN~YR~slnLp~-----L~kN~kA~ClA~eiA~~~~ 43 (167)
..++|+.-|.||....-|+ |.=+..-+=.|.+.|++..
T Consensus 15 ~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~~c~ 57 (164)
T d1rc9a1 15 QNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCI 57 (164)
T ss_dssp HHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHHHHh
Confidence 4668888899999887776 7666555556667776643
No 7
>d1c0aa2 d.74.4.1 (A:288-420) Prokaryotic AspRS, insert domain {Escherichia coli [TaxId: 562]}
Probab=16.95 E-value=21 Score=24.57 Aligned_cols=45 Identities=16% Similarity=0.216 Sum_probs=33.6
Q ss_pred CCCCCCChhHhhhhcccccc----ccCCceeeeeeccCCCccccccccchhhhhh
Q 031010 55 KSPPLSNYNRLVKKCDIDIN----TNRDGVVLPVCVHDLVPTLVLTNYTHSSYAQ 105 (167)
Q Consensus 55 ~~~q~pnyp~~l~kC~inin----~T~DG~imPvCVP~l~~~~vltNyT~S~y~~ 105 (167)
+|.+|-+..+..+.|...+= ....|.|-=+|||+.. +++|+++.+
T Consensus 1 npmei~Dvt~if~~s~f~vF~~~~~~~gg~Vk~i~vp~~~------~~srk~id~ 49 (133)
T d1c0aa2 1 NPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGA------SLTRKQIDE 49 (133)
T ss_dssp SCCCEEECHHHHTTCSCHHHHHHHHCTTEEEEEEEETTGG------GCCHHHHHH
T ss_pred CCEEEEEHHHHhCCCCchhhhHhHhCCCCEEEEEEccCCc------cccHHHHHH
Confidence 45677888889999987742 2357899999999864 588887544
No 8
>d1wkta_ b.11.1.2 (A:) Yeast killer toxin {Williopsis mrakii [TaxId: 4963]}
Probab=16.88 E-value=21 Score=24.01 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=17.0
Q ss_pred ccccccCCCceEEEEEeccCCC
Q 031010 113 AGAGVGSEDDWMVVVLTTNTAA 134 (167)
Q Consensus 113 tg~GiGsed~WmVvVLtTnT~~ 134 (167)
|-+|||++-.|||--=+|+.-.
T Consensus 26 tcvgig~nvhwmvtg~st~g~q 47 (88)
T d1wkta_ 26 TCVGIGANVHWMVTGGSTDGKQ 47 (88)
T ss_dssp SCEECCSSCCEEEECCTTTTSC
T ss_pred eeEeeccceEEEEecCCcCCcc
Confidence 6789999999999765555443
No 9
>d1r4xa2 d.105.1.2 (A:763-873) Coatomer gamma subunit, C-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.94 E-value=26 Score=24.20 Aligned_cols=55 Identities=13% Similarity=0.182 Sum_probs=37.0
Q ss_pred cHHHHHHHcCCCCccccCC-CCCC--------CCCCChhHhhhhccccccccCCceeeeeeccCCCc
Q 031010 34 LADEVAEDLEDQPCTSINI-GVKS--------PPLSNYNRLVKKCDIDINTNRDGVVLPVCVHDLVP 91 (167)
Q Consensus 34 lA~eiA~~~~~qpCt~~t~-g~~~--------~q~pnyp~~l~kC~inin~T~DG~imPvCVP~l~~ 91 (167)
-.++|.+.|.=|||+.+-. +.+. -.+=+=.+-|.+|++.+. +|+.|-++|-.-++
T Consensus 38 Av~~li~~Lgm~pcegsd~V~~~~~sHtL~LsG~~~gg~~VLvr~~la~~---~gVt~kl~vRS~d~ 101 (111)
T d1r4xa2 38 AVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLLL---DTVTMQVTARSLEE 101 (111)
T ss_dssp HHHHHHHHHTCEECTTTTSCCSSCSEEEEEEEEEETTTEEEEEEEEEEES---SSEEEEEEEEESSH
T ss_pred HHHHHHHHcCCccccCccccCCCCcceEEEEEEEEeCCCEEEEEEEEecc---CCeEEEEEEecCCh
Confidence 4689999999999998754 1110 011122356888988764 69999999866544
No 10
>g1lya.1 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.68 E-value=34 Score=24.29 Aligned_cols=31 Identities=32% Similarity=0.681 Sum_probs=24.1
Q ss_pred cccccchhhhhhcccCCCcccccccCCCceEEEEEeccC
Q 031010 94 VLTNYTHSSYAQYLNNSKFAGAGVGSEDDWMVVVLTTNT 132 (167)
Q Consensus 94 vltNyT~S~y~~yLNdSkytg~GiGsed~WmVvVLtTnT 132 (167)
-|+||...+| +.-|.||+..+++-+++-|-.
T Consensus 6 ~l~~~~d~~Y--------~~~i~iGtP~q~~~~~~DTGS 36 (338)
T g1lya.1 6 VLKNYMDAQY--------YGEIGIGTPPQCFTVVFDTGS 36 (338)
T ss_dssp EEEEETTTEE--------EEEEEETTTTEEEEEEEETTC
T ss_pred cceecCCcEE--------EEEEEEcCCCeEEEEEEECCC
Confidence 5788877666 345799999999999998743
Done!