BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031011
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 235 bits (600), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 108/139 (77%), Positives = 123/139 (88%)
Query: 1 MTADGGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTG 60
MT G NQLIS+ P+ELKF+FELEKQ +CDLKV N TE++VAFKVKTTSPKKYFVRPNTG
Sbjct: 1 MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60
Query: 61 VVQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIE 120
V+QPWDSCIIRVTLQAQRE PPDMQCKDKFLLQSTIVP +TDVD+LP DTF KDSGKT+
Sbjct: 61 VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120
Query: 121 ECKLRVVYVSPSSAQGNLE 139
ECKL+V Y++PS+ Q + E
Sbjct: 121 ECKLKVSYITPSTTQRSSE 139
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHH-VAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+++HP ELKF FEL+KQ C +++ N T VAFKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6 LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65
Query: 68 CIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 127
C + VT+QAQ+E+P DMQCKDKFL+Q+ +V T ++ + FNK++G+ IE+ KLRVV
Sbjct: 66 CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125
Query: 128 YV 129
Y+
Sbjct: 126 YI 127
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 93/125 (74%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++V P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 20 SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
+C + VT+QAQ+E+P DMQCKDKFLLQ I ++ P+ F+K++G +EE KLRV
Sbjct: 80 TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRV 139
Query: 127 VYVSP 131
YV+P
Sbjct: 140 TYVAP 144
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 92/126 (73%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
N+L+++ P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 125
S + VT+QAQ+E+P D+QCKDKFLLQ + D+ + F+K++G +EE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 126 VVYVSP 131
VVYV+P
Sbjct: 122 VVYVAP 127
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 85/126 (67%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSC 68
L+ + P L+F +L+KQ C +++ N T H+VAFKVKTTSPKKY VRPN GVV P +C
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 69 IIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVY 128
V +QA +E PPDM CKDKFL+QST V + T +D+ F+K GK IEE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 129 VSPSSA 134
V PS +
Sbjct: 125 VPPSDS 130
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 95/153 (62%), Gaps = 4/153 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
++L+ + P +++F EL K+ C L + N TE++VAFK KTT+ KKY+VRPN GVV P
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 125
SC + V +QA +E+P DMQC+DK L Q +V T D+ + F+K++G EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 126 VVYVS----PSSAQGNLEDEGLVSATRSPDANS 154
V+YV+ PS Q E+ A+ S + N+
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGNA 325
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++ +++F EL KQG C L + N T+++VAFK +TT PK Y V+P+ GVV P
Sbjct: 4 DELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRS 63
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
SC + V +QA +E+P D QCKDK L Q +V T ++ + F+K++G +EE ++
Sbjct: 64 SCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKI 123
Query: 127 VYVSP----SSAQGNLEDEGLVSATRSPDANS 154
+YV+P S Q LED SA+ S N+
Sbjct: 124 IYVAPPQPQSPVQEGLEDGSSPSASVSDKGNA 155
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 84/130 (64%)
Query: 5 GGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQP 64
N+L+ + P L+F FEL+KQ C L + N T+++VAFKVKTT+ Y VRPN G++ P
Sbjct: 2 SNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILP 61
Query: 65 WDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKL 124
+C + VT+QAQ+E P DMQ +KF++QS + ++ + F+K+SG +EE KL
Sbjct: 62 KSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKL 121
Query: 125 RVVYVSPSSA 134
RV YV ++
Sbjct: 122 RVTYVCSTTT 131
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 26/150 (17%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESP-PDMQCKDK 89
+ V N V FKVKTT+PK Y VRPN+G ++P + ++V LQA +E P PD +C+DK
Sbjct: 23 ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDK 82
Query: 90 FLLQSTIVPSNTDVDDLPPDTFN------KDSGKTIEECKLRVVYVS---PSSAQGNLED 140
FL+QS + D D + ++ + G++I + K+R VY + P SA +E+
Sbjct: 83 FLIQSMAI---GDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVYSTKQPPQSADKQVEN 139
Query: 141 -------------EGLVSATRSPDANSVSF 157
E L S+ P A VS
Sbjct: 140 TSTSNPPVSVEGSENLASSVGGPTAVGVSL 169
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 29 CDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESP-PDMQCK 87
CDL++ N + + FKVKTT+PK+Y VRPN G ++ + + V LQ P P +C+
Sbjct: 21 CDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLDHEPAPGTKCR 80
Query: 88 DKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYV-SPSSAQGN 137
DKFL+QST + D+ D + + S I E K+R VY PS+A +
Sbjct: 81 DKFLVQSTELKPELQGMDI-ADIWTQVSKANISERKIRCVYSEGPSTANAH 130
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 21/146 (14%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQ 75
EL+F DLK+ N T+ + FKVKTT+PK+Y VRPN+G+++P S + V LQ
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 76 AQRESPPDMQCKDKFLLQSTIVPSNTDVD------DLPPDTFNKDSGKTIEECKLRVVYV 129
P+ + K KF++QS P + D PP+ ++ + KLR V+
Sbjct: 75 PFNYD-PNEKNKHKFMVQSMYAPDHVVESQELLWKDAPPE--------SLMDTKLRCVFE 125
Query: 130 SP-SSAQGNLEDEGLVSATRSPDANS 154
P S Q D A+R+ DA +
Sbjct: 126 MPDGSHQAPASD-----ASRATDAGA 146
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
S + V LQ + P+ + K KF++QS P TD D+ + + + + + KLR
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAP--TDTSDMEA-VWKEAKPEDLMDSKLRC 121
Query: 127 VYVSPS 132
V+ P+
Sbjct: 122 VFELPA 127
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
S + V LQ + P+ + K KF++QS P TD D+ + + + + + KLR
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAP--TDTSDMEA-VWKEAKPEDLMDSKLRC 121
Query: 127 VYVSPSSAQG--NLEDEGLVSATRS 149
V+ P+ ++E ++S T S
Sbjct: 122 VFELPAENDKPHDVEINKIISTTAS 146
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLR 125
S + V LQ + P+ + K KF++QS P +T D++ + + + + + + KLR
Sbjct: 66 SLNVSVMLQP-FDYDPNEKSKHKFMVQSMFAPPDTSDMEAV----WKEAKPEDLMDSKLR 120
Query: 126 VVYVSPS 132
V+ P+
Sbjct: 121 CVFELPA 127
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLR 125
S + V LQ + P+ + K KF++QS P++T D++ + + + + + KLR
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAPADTSDME----AAWKEAKPEDLMDSKLR 120
Query: 126 VVYVSPSSAQG--NLEDEGLVSATRSPDANSVSFGILLFAL 164
V+ P+ ++E ++S T S V L AL
Sbjct: 121 CVFELPAENDKPHDVEINKIISTTASKTETPVVSKALSSAL 161
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P NT D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNTSDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P NT D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNTSDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLR 125
S + V LQ + P+ + K KF++QS P +T D++ + + + + + + KLR
Sbjct: 66 SLNVSVMLQP-FDYDPNEKSKHKFMVQSMFAPPDTSDMEAV----WKEAKPEDLMDSKLR 120
Query: 126 VVYVSPS 132
V+ P+
Sbjct: 121 CVFELPA 127
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+GV+ P + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 132
LQ + P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 10 ISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCI 69
+ + P+ L + L +Q + NN++ +AFKVKTT+PK Y VRPN VV P ++
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 70 IRVTLQAQRESP-PDMQCKDKFLLQSTIVPSNTDVD 104
++V E P D +C+DKFL+ +PS D++
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLV--ITLPSPYDLN 97
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 15 EELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIR--- 71
E+L F +E KQ +K+ N ++ HVAFK +TT+PK F+RP ++ P ++ I
Sbjct: 114 EKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFK 173
Query: 72 -VTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYVS 130
V E P D + + KF + S V D P+ F++ +E LRV+++
Sbjct: 174 FVEPPENNEKPMDQRSRVKFKIMSLKVKGPMDYV---PELFDEQKDDVSKEQILRVIFLD 230
Query: 131 PSSAQGNLE 139
P + LE
Sbjct: 231 PERSNPALE 239
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS22 PE=1 SV=2
Length = 175
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 10 ISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCI 69
+ + PE+L F L KQ +K+ N+ E V FKV+T++P KY VRPN ++ +S
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 70 IRVTLQAQRESPPD---MQCKDKFLLQSTIVPS 99
+++ +S D Q +DKFL+ + +P+
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTLPIPA 93
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIR---- 71
+L F +E KQ +K+ N ++ HVAFK +TT PK F+RP ++ P + I
Sbjct: 107 KLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKF 166
Query: 72 VTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYVSP 131
V E P + + KF + S + TD P+ F + EE +RVV++ P
Sbjct: 167 VEPPENNEKPMEQKSGVKFKIMSLKMKVPTDYM---PELFEEQKDHVSEEQVMRVVFLDP 223
Query: 132 SSAQGNLE 139
+ +E
Sbjct: 224 ENPNSMME 231
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 17 LKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRV---- 72
L F +E KQ +K+ N ++ H AFK +TT+PK ++RP GV+ P +S V
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 73 -TLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYV-- 129
+ + P + + K KF + S V + P+ F++ + E LRV+++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGVEYV---PELFDEQKDQVAVEQVLRVIFIDA 201
Query: 130 -SPSSAQGNL-----EDEGLVSATRSP 150
PS+A L E E V A + P
Sbjct: 202 DRPSAALEKLKRQLDEAEAAVEARKKP 228
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + +E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRVTLQAQRESPPDMQCKDKFLLQST 95
I V+ + +D+FL+ +
Sbjct: 387 IDIIVSPHGGL----TVSAQDRFLIMAA 410
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRVTLQAQRESPPDMQCKDKFLLQS 94
I V+ + +D+FL+ +
Sbjct: 387 VDIVVSPHGGL----TVSAQDRFLIMA 409
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77
PE=2 SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q2T9W7|MSPD1_BOVIN Motile sperm domain-containing protein 1 OS=Bos taurus GN=MOSPD1
PE=2 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCMDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 95 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 140
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P05634|MSP10_CAEEL Major sperm protein 10/36/56/76 OS=Caenorhabditis elegans
GN=msp-10 PE=2 SV=4
Length = 127
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55
PE=2 SV=3
Length = 127
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKEAVLLAVSCDA 77
>sp|P53019|MSP33_CAEEL Major sperm protein 33 OS=Caenorhabditis elegans GN=msp-33 PE=2
SV=2
Length = 127
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ + V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVFLAVSCDA 77
>sp|Q9XXL3|SSP31_CAEEL Sperm-specific class P protein 31 OS=Caenorhabditis elegans
GN=ssp-31 PE=1 SV=1
Length = 107
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 33 VINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESPPDMQCKDKFLL 92
+++ +E +AFKVK+++ + Y VRP G V + L+ R + P + DK ++
Sbjct: 22 IVSESESRLAFKVKSSNNESYRVRPVYGFVDAKG----KAKLEVNRLAGPAKE--DKLVI 75
Query: 93 QSTIVPSN 100
Q VP++
Sbjct: 76 QYAEVPAD 83
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
++VIN + + F KTT PK+ + P GV+ P +S + ++ A
Sbjct: 31 VRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAISCDA 76
>sp|Q18461|MSP49_CAEEL Major sperm protein 49 OS=Caenorhabditis elegans GN=msp-49 PE=2
SV=3
Length = 127
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KT + K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTINMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|O84060|ISPG_CHLTR 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=ispG PE=3 SV=1
Length = 602
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 62 VQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLP 107
+Q W I+RVT+Q RE KD+ + Q+ +P D+ P
Sbjct: 53 LQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFP 98
>sp|B0BB44|ISPG_CHLTB 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia
trachomatis serovar L2b (strain UCH-1/proctitis) GN=ispG
PE=3 SV=1
Length = 602
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 62 VQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLP 107
+Q W I+RVT+Q RE KD+ + Q+ +P D+ P
Sbjct: 53 LQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFP 98
>sp|Q3KMW4|ISPG_CHLTA 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia
trachomatis serovar A (strain HAR-13 / ATCC VR-571B)
GN=ispG PE=3 SV=1
Length = 602
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 62 VQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLP 107
+Q W I+RVT+Q RE KD+ + Q+ +P D+ P
Sbjct: 53 LQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFP 98
>sp|P53023|MSP3_GLORO Major sperm protein 3 OS=Globodera rostochiensis GN=MSP-3 PE=2
SV=2
Length = 126
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+++IN + F KTT PK+ + P GV+ P +S + ++ A
Sbjct: 31 VRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAISCDA 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,256,550
Number of Sequences: 539616
Number of extensions: 2644905
Number of successful extensions: 4917
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4845
Number of HSP's gapped (non-prelim): 79
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)