BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031012
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 159 bits (403), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 117/160 (73%), Gaps = 5/160 (3%)
Query: 3 LFLFFS--MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLG 60
L+ F S MQ+TI+RYL+HTKD + + +E+NMQHLK+EAANM+KKIE LE SKRKLLG
Sbjct: 54 LYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLG 113
Query: 61 EGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCG- 119
EG+ +C++EELQQIE+QLEKSV IRARK QVF EQI QLK+K K L AEN +L EK G
Sbjct: 114 EGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGS 173
Query: 120 --MENWQGSKEQPENLTNDDGASTSDVETELFIGPPPERR 157
E W ++ +++ + +S+VET+LFIG P R
Sbjct: 174 HESEVWSNKNQESTGRGDEESSPSSEVETQLFIGLPCSSR 213
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 21/174 (12%)
Query: 4 FLFFSMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGL 63
F S+ TIERY + K+ N + + N Q + E + + KKIE LE+SKRKLLGEG+
Sbjct: 57 FSSSSIAATIERYQRRIKEIGNNHKRND-NSQQARDETSGLTKKIEQLEISKRKLLGEGI 115
Query: 64 ASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENW 123
+C++EELQQ+E QL++S+S IRA+K Q+ E+I +LK + + L EN L+EK W
Sbjct: 116 DACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK-----W 170
Query: 124 QG----------SKEQPENLTNDDGASTSDVETELFIGPPPERRARRLAIPPQN 167
G S + DD +VET LFIGPP R++++ PPQN
Sbjct: 171 LGMGTATIASSQSTLSSSEVNIDDNM---EVETGLFIGPPETRQSKKF--PPQN 219
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 15/165 (9%)
Query: 4 FLFFSMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGL 63
F S Q+TIERY +TK+ + +Q+++ +K +A + KK+E LE KRKLLGE L
Sbjct: 57 FASASTQKTIERYRTYTKENIG-NKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKL 115
Query: 64 ASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGME-- 121
C++EEL +E +LE+S+ +IR RK ++ EQ+A+L+EK L +N L EKC +
Sbjct: 116 DECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPP 175
Query: 122 -----NWQGSKEQPE---NLTNDDGASTSDVETELFIGPPPERRA 158
+ E P+ N TND+ DVETELFIG P R+
Sbjct: 176 LSAPLTVRAEDENPDRNINTTNDN----MDVETELFIGLPGRSRS 216
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 16/166 (9%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S+Q+TI+RY +TKD N + +Q++Q +K + + KK+E L+ S+RK+LGE L C+
Sbjct: 62 SLQKTIDRYKAYTKDHVN-NKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCS 120
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVL--EAENTR-----LEEKCGM 120
+EEL+ +E +LEKS+ NIR +K ++ QIA+LKEK + L + EN R LE +
Sbjct: 121 IEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
Query: 121 ENWQGSKEQPENLTND--------DGASTSDVETELFIGPPPERRA 158
N + P D A DVET+L+IG P R+
Sbjct: 181 ANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERS 226
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S+Q+TI+RY +TKD N + +Q++Q +K + + KK+E L+ S+RK+LGE L +
Sbjct: 62 SLQKTIDRYKAYTKDHVN-NKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFS 120
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVL--EAENTR-----LEEKCGM 120
+EEL+ +E +LEKS+ IR +K ++ +QIA+LKEK + L + EN R LE +
Sbjct: 121 IEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALV 180
Query: 121 ENWQGSKEQPENLTND--------DGASTSDVETELFIGPPPERRA 158
N + P D A DVET+L+IG P R+
Sbjct: 181 ANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERS 226
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 10/165 (6%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S+ +T+ERY K +D + + + N Q K E + +KIE LE+S RK++GEGL + +
Sbjct: 62 SIPKTVERYQKRIQDLGSNHKRND-NSQQSKDETYGLARKIEHLEISTRKMMGEGLDASS 120
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGME-----N 122
+EELQQ+E QL++S+ IRA+K Q+ E+ +LKEK + L AEN L EKC M+
Sbjct: 121 IEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGRGIIG 180
Query: 123 WQGSKEQPENLTNDDGASTSDVETELFIGPPPERRARRLAIPPQN 167
S L DD + +V T+LFIGPP R ++ PP N
Sbjct: 181 RISSSSSTSELDIDD--NEMEVVTDLFIGPPETRHFKKF--PPSN 221
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 85/147 (57%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
SM+ +ERY +++ D R +P ++ ++ E + K++ L+ S+R+LLGE L + T
Sbjct: 62 SMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLT 121
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENWQGSK 127
++ELQQ+E QLE S+ +IR++KNQ+ E I++L++K K L+ +N L++ E + +
Sbjct: 122 IKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNA 181
Query: 128 EQPENLTNDDGASTSDVETELFIGPPP 154
N +GA+ S P P
Sbjct: 182 IINTNREEQNGATPSTSSPTPVTAPDP 208
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 85/147 (57%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
SM+ +ERY +++ D R +P ++ ++ E + K++ L+ S+R+LLGE L + T
Sbjct: 62 SMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLT 121
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENWQGSK 127
++ELQQ+E QLE S+ +IR++KNQ+ E I++L++K K L+ +N L++ E + +
Sbjct: 122 IKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNA 181
Query: 128 EQPENLTNDDGASTSDVETELFIGPPP 154
N +GA+ S P P
Sbjct: 182 IINTNREEQNGATPSTSSPTPVTAPDP 208
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 88/151 (58%), Gaps = 8/151 (5%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLE-VSKRKLLGEGLASC 66
S++ T+ERY K DT N E N QH + E++ + ++I L+ + R ++G+ + +
Sbjct: 61 SVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTM 120
Query: 67 TLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENWQGS 126
+L +L+Q+E +LEK ++ IRARKN++ ++ ++++ L+ +N L K +EN +G
Sbjct: 121 SLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKV-VENERG- 178
Query: 127 KEQPENLTNDDGASTSDVETELFIGPPPERR 157
+QP N+ ASTS E + + P + R
Sbjct: 179 -QQPLNMM--GAASTS--EYDHMVNNPYDSR 204
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLL 59
L+ F S M +T+ERY ++ +++ PT MQ+ E N+ +E+L+ S+R LL
Sbjct: 54 LYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLL 113
Query: 60 GEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCG 119
GE LA EL+Q+E Q+ +++ IR+RK QV +++ LK K ++L+ N L+ K
Sbjct: 114 GEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLD 173
Query: 120 MENWQGSKEQP 130
+ + + QP
Sbjct: 174 EIDVEAAPPQP 184
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ETIERY K DT N E N QH + EAA + ++I L+ S R L+G+ + +
Sbjct: 103 SVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMN 162
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKC-----GME- 121
EL+Q+E +L+K + IRARKN++ +I ++ + L+ +N L+ K G++
Sbjct: 163 HRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQT 222
Query: 122 -NWQGSKEQPENLTN 135
N GS E + N
Sbjct: 223 VNMMGSASTSEYVQN 237
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D N TE N Q+ + EA+ + ++I ++ S R ++GE L S
Sbjct: 76 SVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLN 135
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENWQGSK 127
+EL+ +E +LEK +S +R++KN++ +I ++++ L+ N L K +G++
Sbjct: 136 FKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIA----EGAR 191
Query: 128 EQPE 131
P+
Sbjct: 192 LNPD 195
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 66/112 (58%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D+ N +E N Q+ + EA+ + +I L+ R +LGE LA+ +
Sbjct: 77 SVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALS 136
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCG 119
L +L+ +E+++EK +S IR++KN++ +I ++++ L N L K
Sbjct: 137 LRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIA 188
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 3 LFLFFS--MQETIERY---LKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRK 57
L+ F S + +T+ERY + +D+ N T Q HE + + K E L+ ++R
Sbjct: 54 LYEFGSAGITKTLERYQHCCYNAQDSNNALSET----QSWYHEMSKLKAKFEALQRTQRH 109
Query: 58 LLGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEK 117
LLGE L +++ELQQ+E+QLE ++S R RK Q+ EQ+ +L+ K + L N +L+ K
Sbjct: 110 LLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHK 169
Query: 118 CGMENWQGSKEQPENLTNDDGASTSDVET-ELFIGPPPERRA 158
+E GS + A + VE ++ PPP A
Sbjct: 170 LEVE---GSTSNYRAMQQASWAQGAVVENGAAYVQPPPHSAA 208
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D+ N E N Q+ + EA+ + +I L+ R LGE LA+
Sbjct: 77 SVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALN 136
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCG 119
L +L+ +E+++EK +S IRA+KN++ +I ++++ L N L K
Sbjct: 137 LRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIA 188
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D+ N +E N Q+ + EA+ + +I L R ++GE LA
Sbjct: 77 SVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMK 136
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENWQGSK 127
L+EL+ +E+++EK +S IR++KN++ +I ++++ L N L K +
Sbjct: 137 LKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQ 196
Query: 128 EQPENLTNDDGASTSDVETELFIGPPPE 155
Q NL G+S++ E + PPP+
Sbjct: 197 HQQMNLM--PGSSSNYHE----LVPPPQ 218
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
+++ TIERY K D+ N E N + + E+A + ++I+ ++ S R L+G+ L+S +
Sbjct: 61 NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLS 120
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCG-MENWQGS 126
++EL+Q+E +LEK++S IR++K+++ +I +++ L+ EN L K +E +Q
Sbjct: 121 VKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQH 180
Query: 127 KEQ 129
Q
Sbjct: 181 HHQ 183
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
SM++ IERY K + + TE + QHL E M + E L+ + R+++GE L S T
Sbjct: 63 SMKKIIERYQKVSG-----ARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLT 117
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ EL + +QLE + S +R+RKNQ+ +Q+ L+ K ++LE +N+ L
Sbjct: 118 MTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHL 164
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 65/110 (59%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D+ N +E N Q + EA+ + ++I ++ + R ++GE L S T
Sbjct: 77 SVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLT 136
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEK 117
+ +L+ +E +LEK +S IR++KN++ +I +++K L N L K
Sbjct: 137 VRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAK 186
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 16/113 (14%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKH------EAANMVKKIELLEVSKRKLLGE 61
S++E IE+Y Q T + + + H E M ++E LE R+ G+
Sbjct: 63 SLRELIEQY----------QHATNSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGD 112
Query: 62 GLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
L+S TL+++ +E+QLE SVS +RARK+Q+ N+Q+ L+ K ++LE +NT L
Sbjct: 113 DLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFL 165
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 11 ETIERYLKHTKDT--RNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
E +RYL K R+ Q ++H K +A ++E+LE +KR +GE L S +L
Sbjct: 68 ERYDRYLYSDKQLVGRDISQSENWVLEHAKLKA-----RVEVLEKNKRNFMGEDLDSLSL 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEK 117
+ELQ +E QL ++ +IR+RKNQ E I+ L++K KVL+ N L +K
Sbjct: 123 KELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKK 171
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 11 ETIERYLKHTKD--TRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
E +RYL K R+ Q ++H K +A ++E+LE +KR +GE L S +L
Sbjct: 68 ERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKA-----RVEVLEKNKRNFMGEDLDSLSL 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEK 117
+ELQ +E QL+ ++ +IR+RKNQ E I+ L++K K L+ N L +K
Sbjct: 123 KELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKK 171
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQPTEQ-NMQ-HLKHEAANMVKKIELLEVSKRK 57
LF + S M++ +ERY +++ + + P N Q + E + + KIELLE ++R
Sbjct: 54 LFEYSSESCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRH 113
Query: 58 LLGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
LGE L S +++ELQ +E+QL+ S+ +IR+RKNQ+ +E + L+ K K + EN+ L
Sbjct: 114 YLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSML 170
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQP-TEQNMQ-HLKHEAANMVKKIELLEVSKRK 57
LF + S M++ +ERY +++ R P + N Q + E + + KIELLE ++R
Sbjct: 54 LFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRH 113
Query: 58 LLGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
LGE L +L++LQ +E+QLE ++ +IR+RKNQ+ NE + L+ K K ++ EN+ L
Sbjct: 114 YLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSML 170
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQPTEQ-NMQ-HLKHEAANMVKKIELLEVSKRK 57
LF + S M++ +ERY +++ + + P N Q + E + + KIELLE ++R
Sbjct: 54 LFEYSSESCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRH 113
Query: 58 LLGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
LGE L S +++ELQ +E+QL+ S+ +IR+RKNQ+ +E + L+ K K + EN+ L
Sbjct: 114 YLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSML 170
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQPTEQ-NMQ-HLKHEAANMVKKIELLEVSKRK 57
LF + S M++ +ERY +++ + + P N Q + E + + KIELLE ++R
Sbjct: 54 LFEYSSESCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRH 113
Query: 58 LLGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
LGE L S +++ELQ +E+QL+ S+ +IR+RKNQ+ +E + L+ K K + EN+ L
Sbjct: 114 YLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSML 170
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQP-TEQNMQHLKHEAANMVKKIELLEVSKRKL 58
LF F S M +T+ERY ++++ P E N Q E + ++E L+ ++R +
Sbjct: 54 LFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQ----EYLKLKTRVEFLQTTQRNI 109
Query: 59 LGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKC 118
LGE L +++EL+Q+E Q+E S+ IR+RKNQ +Q+ LK K + L+ N L +K
Sbjct: 110 LGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL 169
Query: 119 GMENWQGSKEQPENLTNDDGASTSDVETEL---------FIGPPPERRARRLAI 163
+ S E +++ DG S T L + P P++ L I
Sbjct: 170 Q----ETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQI 219
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQP-TEQNMQHLKHEAANMVKKIELLEVSKRKL 58
LF F S M +T+ERY ++++ P E N Q E + ++E L+ ++R +
Sbjct: 54 LFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQ----EYLKLKTRVEFLQTTQRNI 109
Query: 59 LGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKC 118
LGE L +++EL+Q+E Q+E S+ IR+RKNQ +Q+ LK K + L+ N L +K
Sbjct: 110 LGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL 169
Query: 119 GMENWQGSKEQPENLTNDDGASTSDVETEL---------FIGPPPERRARRLAI 163
+ S E +++ DG S T L + P P++ L I
Sbjct: 170 Q----ETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQI 219
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 67/112 (59%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D N E N Q+ + E+A + ++I ++ S R+L+GE + S +
Sbjct: 77 SVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMS 136
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCG 119
+EL+ +E +LE+S++ IR++KN++ +I ++++ L +N L K
Sbjct: 137 PKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIA 188
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D N TE N Q+ + EA+ + ++I ++ R +LGE L S
Sbjct: 76 SVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLN 135
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAEN----TRLEEKCGMENW 123
+EL+ +E +LEK +S +R++K+++ +I ++++ L+ +N +++ E+ G++
Sbjct: 136 FKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQ 195
Query: 124 QGS 126
+ S
Sbjct: 196 ESS 198
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 10/130 (7%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLL 59
L+ F S M +T+ERY + + + QP+++ + E + K+++L+ S R LL
Sbjct: 54 LYEFCSTSCMNKTLERYQRCSYGSLETSQPSKET-ESSYQEYLKLKAKVDVLQRSHRNLL 112
Query: 60 GEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAEN----TRLE 115
GE L + +EL+Q+E QL+KS+ IR+ K Q +Q+A L++K ++L N T+LE
Sbjct: 113 GEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLE 172
Query: 116 EKCGM--ENW 123
E C NW
Sbjct: 173 ESCASFRPNW 182
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 65/106 (61%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ + I +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSML 168
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 65/106 (61%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ + I +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSML 168
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 65/106 (61%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ + I +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSML 168
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
SM+ I+RY K +KD + ++ + EAA++ +++ L+ + R+L+GE L+
Sbjct: 61 SMKSVIDRYGK-SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLN 119
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGM 120
++ELQ +E QLE S+ ++R +K+ V ++I +L KG ++ EN L +K +
Sbjct: 120 VKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISL 172
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 62 CMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMS 121
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR RKNQ+ E I +L++K K ++ +N+ L
Sbjct: 122 PKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSML 168
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQN-MQHLKHEAANMVKKIELLEVSKRKLLGEGLASC 66
S + TIERY K + T + N Q+ + EAA M +I+ L+ + R L+GE + +
Sbjct: 62 STRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNM 121
Query: 67 TLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENWQGS 126
T +EL+ +E +LEK +S IR++K+++ +I ++++ L+ EN L K
Sbjct: 122 TAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVA------- 174
Query: 127 KEQPENLTNDDGASTSDVETELFIGPPP 154
+ E +DD + D E + P P
Sbjct: 175 --EAERAEHDDQQAAEDDE----MAPAP 196
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1 PE=2
SV=1
Length = 256
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ E I +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYESINELQRKEKAIQEQNSML 168
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1
Length = 252
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 67/112 (59%)
Query: 8 SMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCT 67
S++ TIERY K D N E N Q+ + E+A + ++I ++ S R+L+GE + S +
Sbjct: 77 SVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMS 136
Query: 68 LEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCG 119
+EL+ +E +L++SV+ IR++KN++ +I ++++ L +N L K
Sbjct: 137 PKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIA 188
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 65/106 (61%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSS 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ ++ I +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSML 168
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR RKNQ+ E I +L++K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSML 168
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLNAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR RKNQ+ E I +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSML 168
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 86/151 (56%), Gaps = 20/151 (13%)
Query: 9 MQETIERYLKHTKDTR-----NKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGL 63
M+ +ERY +++ + + P ++H K +A ++E+L+ +++ +GE L
Sbjct: 63 MERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKA-----RLEVLQRNQKHYVGEDL 117
Query: 64 ASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENW 123
S +++ELQ +E QL+ ++ +IR+RKNQ+ +E I+ L++K + L+ +N +L +K
Sbjct: 118 ESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKV----- 172
Query: 124 QGSKEQPENLTNDDGASTSDV--ETELFIGP 152
KE+ ++ G ++S + T+ ++G
Sbjct: 173 ---KEREKSAQQISGINSSSLFAHTDFYLGT 200
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 52/75 (69%)
Query: 40 EAANMVKKIELLEVSKRKLLGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQ 99
E + + KIELLE ++R LGE L S +++ELQ +E+QL+ S+ +IR+RKNQ+ +E +
Sbjct: 96 EYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNH 155
Query: 100 LKEKGKVLEAENTRL 114
L+ K K + EN+ L
Sbjct: 156 LQRKEKEILEENSML 170
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ + + +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSML 168
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ + + +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSML 168
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ + + +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSML 168
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%)
Query: 9 MQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGLASCTL 68
M++ +ERY +++ R P + E + KIELLE ++R LGE L + +
Sbjct: 63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122
Query: 69 EELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
+ELQ +E+QL+ ++ +IR+RKNQ+ + + +L+ K K ++ +N+ L
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSML 168
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 4 FLFFSMQETIERYLKHTKDTRNKQQPTEQNMQHLKHEAANMVKKIELLEVSKRKLLGEGL 63
F SM+ IERY +T ++ P + +Q + EAA + +++ L+ + R+++GE L
Sbjct: 57 FSSSSMKSVIERYSDAKGETSSENDPASE-IQFWQKEAAILKRQLHNLQENHRQMMGEEL 115
Query: 64 ASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRLEEKCGMENW 123
+ ++E LQ +E QLE S+ +R +K+Q+ E+I L +G ++ EN L +K + +
Sbjct: 116 SGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQ 175
Query: 124 Q 124
Q
Sbjct: 176 Q 176
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 3 LFLFFS---MQETIERYLKHTKDTRNKQQPTEQ-NMQ-HLKHEAANMVKKIELLEVSKRK 57
LF + S M++ +ERY +++ R P N Q + E + + KIELLE ++R
Sbjct: 54 LFEYTSESCMEKVLERYERYSYAERQLIAPDSHINAQPNWSMEYSRLKAKIELLERNQRH 113
Query: 58 LLGEGLASCTLEELQQIERQLEKSVSNIRARKNQVFNEQIAQLKEKGKVLEAENTRL 114
LGE L +L++LQ +E+QLE ++ +IR+RKNQ+ E + L+ K ++ EN+ L
Sbjct: 114 YLGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYESLNHLQRKENEIQEENSML 170
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,576,319
Number of Sequences: 539616
Number of extensions: 2302044
Number of successful extensions: 11254
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 552
Number of HSP's that attempted gapping in prelim test: 10696
Number of HSP's gapped (non-prelim): 1127
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)