AT2G36320 protein (Arabidopsis thaliana)

STRING 9.05

AT2G36320 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	AT2G36320	zinc finger (AN1-like) family protein; zinc finger (AN1-like) family protein; FUNCTIONS IN- DNA binding, zinc ion binding; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Zinc finger, AN1-type (InterPro-IPR000058), Zinc finger, A20-type (InterPro-IPR002653); BEST Arabidopsis thaliana protein match is- zinc finger (AN1-like) family protein (TAIR-AT3G52800.1); Has 766 Blast hits to 751 proteins in 109 species- Archae - 0; Bacteria - 0; Metazoa - 386; Fungi - [...] (161 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G06260	nucleolar protein-related; nucleolar protein-related; FUNCTIONS IN- calcium ion binding; INVOLV [...] (424 aa)	•	0.716
	AT2G45380	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (494 aa)	•	0.716
	AT2G42350	zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (217 aa)	•	0.716
	AT1G11020	zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (321 aa)	•	0.716
	AT1G04850	ubiquitin-associated (UBA)/TS-N domain-containing protein; ubiquitin-associated (UBA)/TS-N doma [...] (413 aa)	•	0.677
	AT5G17850	cation exchanger, putative (CAX8); cation exchanger, putative (CAX8); FUNCTIONS IN- cation-cati [...] (559 aa)	•	0.675
	AT1G65820	microsomal glutathione s-transferase, putative; microsomal glutathione s-transferase, putative; [...] (194 aa)	•	0.659
	AT2G48020	sugar transporter, putative; sugar transporter, putative; FUNCTIONS IN- carbohydrate transmembr [...] (463 aa)	•	0.657
	AT2G16360	40S ribosomal protein S25 (RPS25A); 40S ribosomal protein S25 (RPS25A); FUNCTIONS IN- structura [...] (125 aa)	•	0.649
	AT2G47830	cation efflux family protein / metal tolerance protein, putative (MTPc1); cation efflux family [...] (471 aa)	•	0.599

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink