Citrus Sinensis ID: 031016

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN
Secondary Structure (PSIPRED)
cccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEcccccccEEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHccccEEEEEccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEHHcccccccccccccc
Coil and Loop (DISEMBL)
mrnmtssgsscrGIAAIVgvgpnlgrSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRidcsdsrsvREAFEGVLSLGFVEVLVYnayqpvswqptnfteisFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGcsaslngiAGFSELCKN
Flexible Loop (DISEMBL)
mrnmtssgsscrgIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAreeksqvfairidcsdsrSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGcsaslngiagfselckn
Low Complexity Region (SEG)
MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN
Disordered region (IsUnstruct)
**********CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE****
Disordered Region (DISOPRED)
***************AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC*N
Disordered Region (DISEMBL)
**********CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN
Disordered Region (DISPRO)
**********CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
A5PJF6	330	Inactive hydroxysteroid d	yes	no	0.868	0.439	0.281	6e-08
Q5R7K0	330	Inactive hydroxysteroid d	yes	no	0.868	0.439	0.287	2e-07
Q3SXM5	330	Inactive hydroxysteroid d	yes	no	0.868	0.439	0.287	3e-07
P69936	248	NADP-dependent L-serine/L	yes	no	0.802	0.540	0.269	1e-06
P69935	248	NADP-dependent L-serine/L	N/A	no	0.802	0.540	0.269	1e-06
P71534	255	3-oxoacyl-[acyl-carrier-p	no	no	0.760	0.498	0.314	2e-06
P46331	273	Uncharacterized oxidoredu	yes	no	0.778	0.476	0.313	2e-06
Q8FHD2	248	NADP-dependent L-serine/L	yes	no	0.802	0.540	0.248	2e-06
Q83RE8	248	NADP-dependent L-serine/L	yes	no	0.802	0.540	0.248	2e-06
A1DH66	345	Very-long-chain 3-oxoacyl	N/A	no	0.808	0.391	0.226	3e-06

>sp|A5PJF6|HSDL1_BOVIN Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Bos taurus GN=HSDL1 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 8/153 (5%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +GR+ A + A  G  + +++R   +L   A +IA   K +   I  D S  
Sbjct: 70  AVVSGATDGIGRAYAEELASRGLNIVLISRSQEKLQMVAKDIADTYKVETDIIVADFSSG 129

Query: 75  RSVREAFEGVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           R + +     L    + +LV N   + P    P  FT++S D+    + ++   A L   
Sbjct: 130 REIYDMIREALQDRDIGILVNNVGVFYP---YPQYFTQVSEDTLWDIVNVNIAAASLMVH 186

Query: 133 QVLSGMVERGKGTIIFT---GCSASLNGIAGFS 162
            VL GMVER KG I+      C      +A FS
Sbjct: 187 IVLPGMVERKKGAIVTISSGSCCKPTPQLAAFS 219

Bos taurus (taxid: 9913)

>sp|Q5R7K0|HSDL1_PONAB Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Pongo abelii GN=HSDL1 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 8/153 (5%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +GR+ A + A  G  + +++R+  +L   A +IA   K +   I  D S  
Sbjct: 70  AVVSGATDGIGRAYAEELASRGLNIILISRNEEKLQVVAKDIADTYKVETGIIVADFSSG 129

Query: 75  RSVREAFEGVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           R +       L    + +LV N   + P    P  FT++S D     I ++   A L   
Sbjct: 130 REIYLPIREALKDKDIGILVNNVGVFYP---YPQYFTQLSEDKLWDIINVNIAAASLMVH 186

Query: 133 QVLSGMVERGKGTIIFT---GCSASLNGIAGFS 162
            VL GMVER KG I+      C      +A FS
Sbjct: 187 VVLPGMVERKKGAIVTISSGSCCKPTPQLAAFS 219

Pongo abelii (taxid: 9601)

>sp|Q3SXM5|HSDL1_HUMAN Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Homo sapiens GN=HSDL1 PE=1 SV=3

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 8/153 (5%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +G++ A + A  G  + +++R+  +L   A +IA   K +   I  D S  
Sbjct: 70  AVVSGATDGIGKAYAEELASRGLNIILISRNEEKLQVVAKDIADTYKVETDIIVADFSSG 129

Query: 75  RSVREAFEGVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           R +       L    V +LV N   + P    P  FT++S D     I ++   A L   
Sbjct: 130 REIYLPIREALKDKDVGILVNNVGVFYP---YPQYFTQLSEDKLWDIINVNIAAASLMVH 186

Query: 133 QVLSGMVERGKGTIIFT---GCSASLNGIAGFS 162
            VL GMVER KG I+      C      +A FS
Sbjct: 187 VVLPGMVERKKGAIVTISSGSCCKPTPQLAAFS 219

Homo sapiens (taxid: 9606)

>sp|P69936|YDFG_SALTY NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ydfG PE=3 SV=1

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  + G     G  IAR+F   G+ V    R   RL    DE+       V   ++D  +
Sbjct: 2   IVLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELG----ENVLTAQLDVRN 57

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             ++ E    + +    ++VLV NA   +  +P +  + S + ++  I  ++ G     +
Sbjct: 58  RAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAH--KASVEDWETMIDTNNKGLIYMTR 115

Query: 133 QVLSGMVERGKGTIIFTGCSA 153
            VL GMVER +G II  G +A
Sbjct: 116 AVLPGMVERNRGHIINIGSTA 136

Catalyzes the NADP-dependent oxidation of L-allo-threonine and L-serine.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P69935|YDFG_SALTI NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG OS=Salmonella typhi GN=ydfG PE=3 SV=1

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  + G     G  IAR+F   G+ V    R   RL    DE+       V   ++D  +
Sbjct: 2   IVLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELG----ENVLTAQLDVRN 57

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             ++ E    + +    ++VLV NA   +  +P +  + S + ++  I  ++ G     +
Sbjct: 58  RAAIEEMMASLPAQWRDIDVLVNNAGLALGLEPAH--KASVEDWETMIDTNNKGLIYMTR 115

Query: 133 QVLSGMVERGKGTIIFTGCSA 153
            VL GMVER +G II  G +A
Sbjct: 116 AVLPGMVERNRGHIINIGSTA 136

Catalyzes the NADP-dependent oxidation of L-allo-threonine and L-serine.

Salmonella typhi (taxid: 90370)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P71534|FABG_MYCS2 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=fabG PE=3 SV=2

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 16/143 (11%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           + G    +G +IAR+ A +G+ VA+  R  G                +F ++ D +DS +
Sbjct: 28  VTGGNRGIGLAIARRLAADGHKVAVTHRGSG------------APDDLFGVQCDVTDSAA 75

Query: 77  VREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           V  AF+ V    G VEVLV NA           TE   + F++ I  +  GAF CAQ+  
Sbjct: 76  VDRAFKEVEEHQGPVEVLVANAGISKDAFLMRMTE---ERFEEVINTNLTGAFRCAQRAS 132

Query: 136 SGMVERGKGTIIFTGCSASLNGI 158
             M  +  G IIF G  + + GI
Sbjct: 133 RTMQRKRFGRIIFIGSVSGMWGI 155

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P46331|YXBG_BACSU Uncharacterized oxidoreductase YxbG OS=Bacillus subtilis (strain 168) GN=yxbG PE=3 SV=2

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +G++ A  FA+EG  V I   +  ++    D I R+   Q  +  +D SD 
Sbjct: 9   AVITGAATGIGQATAEVFANEGARVIIGDINKDQMEETVDAI-RKNGGQAESFHLDVSDE 67

Query: 75  RSVREAFEGVL--SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            SV+ AF   +  + G +++L  NA   V  +     E   D F + IA+   G FLC++
Sbjct: 68  NSVK-AFADQIKDACGTIDILFNNA--GVDQEGGKVHEYPVDLFDRIIAVDLRGTFLCSK 124

Query: 133 QVLSGMVERGKGTIIFT 149
            ++  M+E G G+II T
Sbjct: 125 YLIPLMLENG-GSIINT 140

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8FHD2|YDFG_ECOL6 NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ydfG PE=3 SV=2

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  + G     G  I R+F  +G+ V    R   RL    DE+       ++  ++D  +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDVRN 57

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             ++ E    + +    +++LV NA   +  +P +  + S + ++  I  ++ G     +
Sbjct: 58  RAAIEEMLASLPAEWSNIDILVNNAGLALGMEPAH--KASIEDWETMIDTNNKGLVYMTR 115

Query: 133 QVLSGMVERGKGTIIFTGCSA 153
            VL GMVER  G II  G +A
Sbjct: 116 AVLPGMVERNHGHIINIGSTA 136

Catalyzes the NADP-dependent oxidation of L-allo-threonine and L-serine.

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q83RE8|YDFG_SHIFL NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG OS=Shigella flexneri GN=ydfG PE=3 SV=2

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  + G     G  I R+F  +G+ V    R   RL    DE+       ++  ++D  +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELTDELG----DNLYIAQLDVRN 57

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             ++ E    + +    +++LV NA   +  +P +  + S + ++  I  ++ G     +
Sbjct: 58  RAAIEEMLASLPAEWSNIDILVNNAGLALGMEPAH--KASVEDWETMIDTNNKGLVYMTR 115

Query: 133 QVLSGMVERGKGTIIFTGCSA 153
            VL GMVER  G II  G +A
Sbjct: 116 AVLPGMVERNHGHIINIGSTA 136

Catalyzes the NADP-dependent oxidation of L-allo-threonine and L-serine.

Shigella flexneri (taxid: 623)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|A1DH66|MKAR_NEOFI Very-long-chain 3-oxoacyl-CoA reductase OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_086780 PE=3 SV=1

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 2/137 (1%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRID-CSD 73
           A + G    LG+  + + A  G+ + +++R   +L+  A+EI  +   Q   + +D  ++
Sbjct: 70  AVVTGASDGLGKEFSLQLARAGFNIVLVSRTASKLTTLAEEITTKHSVQTKTLAMDFAAN 129

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             +  E  + +++   V VL+ N  +     PT F     D     + I+ LG     Q 
Sbjct: 130 DDADYEELKAIVNGLDVAVLINNVGKSHD-IPTPFALTPEDEMTDIVTINCLGTLRTTQL 188

Query: 134 VLSGMVERGKGTIIFTG 150
           ++ GM++R +G ++  G
Sbjct: 189 IIPGMMQRKRGLVLTMG 205

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
255562615	264	short-chain dehydrogenase, putative [Ric	0.982	0.621	0.866	5e-78
224084299	260	predicted protein [Populus trichocarpa]	0.982	0.630	0.885	2e-76
224096782	274	predicted protein [Populus trichocarpa]	0.982	0.598	0.873	2e-74
359496649	258	PREDICTED: 3-ketodihydrosphingosine redu	0.916	0.593	0.875	1e-73
449448338	272	PREDICTED: NADP-dependent L-serine/L-all	0.982	0.602	0.836	2e-73
356511746	267	PREDICTED: 3-ketodihydrosphingosine redu	0.916	0.573	0.875	4e-73
147784628	266	hypothetical protein VITISV_044431 [Viti	0.964	0.605	0.809	9e-73
356563646	263	PREDICTED: uncharacterized oxidoreductas	0.916	0.581	0.849	3e-71
297739381	371	unnamed protein product [Vitis vinifera]	0.916	0.412	0.826	1e-69
18409128	272	Rossmann-fold NAD(P)-binding domain-cont	0.988	0.606	0.790	5e-68

>gi|255562615|ref|XP_002522313.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223538391|gb|EEF39997.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  295 bits (755), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 143/165 (86%), Positives = 155/165 (93%), Gaps = 1/165 (0%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
           MR+M SS +  +GIAAIVGVGP LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAR+E
Sbjct: 1   MRSMASSATP-KGIAAIVGVGPKLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARQE 59

Query: 61  KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSI 120
           K+QVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPV W PTNFT+I  DSF++S+
Sbjct: 60  KAQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVPWHPTNFTDIRIDSFERSL 119

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           A+SS+GAFLCAQQVL GMVERGKGTI+FTGCSASLNGIAGFSELC
Sbjct: 120 AVSSVGAFLCAQQVLPGMVERGKGTILFTGCSASLNGIAGFSELC 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084299|ref|XP_002307254.1| predicted protein [Populus trichocarpa] gi|222856703|gb|EEE94250.1| predicted protein [Populus trichocarpa]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/166 (88%), Positives = 155/166 (93%), Gaps = 2/166 (1%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
           MR+M SS SS +GIAAIVGVGP LGR+IARKFAHEGYTVAILARDLGRLSRFADEIAREE
Sbjct: 1   MRSMASS-SSNKGIAAIVGVGPKLGRTIARKFAHEGYTVAILARDLGRLSRFADEIAREE 59

Query: 61  KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKS 119
           KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQP  + QPTNFT I  DSF+KS
Sbjct: 60  KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPAVYRQPTNFTHIPADSFEKS 119

Query: 120 IAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           +AISS+GAFLCAQQVL GMVERGKGTI+FTGCSASLNGIAGFSELC
Sbjct: 120 LAISSVGAFLCAQQVLPGMVERGKGTILFTGCSASLNGIAGFSELC 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096782|ref|XP_002310734.1| predicted protein [Populus trichocarpa] gi|222853637|gb|EEE91184.1| predicted protein [Populus trichocarpa]

 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/166 (87%), Positives = 154/166 (92%), Gaps = 2/166 (1%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
           MR+MTSS S+ +GIAAIVGVGP LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE
Sbjct: 1   MRSMTSSTSN-KGIAAIVGVGPKLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 59

Query: 61  KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQP-VSWQPTNFTEISFDSFQKS 119
           K+QVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQP VS QPTNFT+I  DSF KS
Sbjct: 60  KAQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPAVSPQPTNFTDICIDSFVKS 119

Query: 120 IAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           +AISS+GAFLCAQQVL GMVER +GTI+FTGCSASLNGIA  SELC
Sbjct: 120 LAISSVGAFLCAQQVLPGMVERRRGTILFTGCSASLNGIACLSELC 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496649|ref|XP_002262804.2| PREDICTED: 3-ketodihydrosphingosine reductase-like [Vitis vinifera]

 Score =  280 bits (716), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 134/153 (87%), Positives = 144/153 (94%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           GI AIVGVGP LGR IARKFAHEGYTVAILARDLGRLSRFADEIAREEK+QVFAIRIDCS
Sbjct: 12  GIVAIVGVGPKLGRCIARKFAHEGYTVAILARDLGRLSRFADEIAREEKAQVFAIRIDCS 71

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           DSRSVREAFEGVLSLGFVEVLVYNAYQPV W PT+FT+I  DSFQKS+A+SS+GAFLCAQ
Sbjct: 72  DSRSVREAFEGVLSLGFVEVLVYNAYQPVPWHPTSFTDIHIDSFQKSLAVSSIGAFLCAQ 131

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           QV+ GMV+R KGTI+FTGCSASLNGIAG+SELC
Sbjct: 132 QVIPGMVDRRKGTILFTGCSASLNGIAGYSELC 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448338|ref|XP_004141923.1| PREDICTED: NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG-like [Cucumis sativus] gi|449512917|ref|XP_004164177.1| PREDICTED: NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG-like [Cucumis sativus]

 Score =  280 bits (715), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/165 (83%), Positives = 153/165 (92%), Gaps = 1/165 (0%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
           MRNM SS S+ RGIAAIVGVGP LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE
Sbjct: 1   MRNMGSSPST-RGIAAIVGVGPKLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 59

Query: 61  KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSI 120
           KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL+YNA Q VS QPT FT++  DSF++S+
Sbjct: 60  KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLIYNANQQVSRQPTRFTDVRIDSFERSL 119

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           A+SS+GAF C+QQV+ GMVERG+GTI+FTGCSASLNG+AGFS+LC
Sbjct: 120 AVSSVGAFHCSQQVIPGMVERGRGTILFTGCSASLNGVAGFSDLC 164

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511746|ref|XP_003524584.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Glycine max]

 Score =  278 bits (712), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 134/153 (87%), Positives = 145/153 (94%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           GIAAIVGVGPNLG SIARKFAHEGYTVAILARDLGRLSRFADEIAREEK+QVFAIRIDCS
Sbjct: 12  GIAAIVGVGPNLGLSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKAQVFAIRIDCS 71

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           DSRSVREAFEGVLSLGFVE+LVYNAYQP+ W PT+F ++  DSF+KS+AISS+GAF CAQ
Sbjct: 72  DSRSVREAFEGVLSLGFVEILVYNAYQPLPWYPTSFQDLRVDSFEKSLAISSVGAFHCAQ 131

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           QVLSGMVERGKGTI+FTGCSASLNGI G+SELC
Sbjct: 132 QVLSGMVERGKGTILFTGCSASLNGIVGYSELC 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784628|emb|CAN74931.1| hypothetical protein VITISV_044431 [Vitis vinifera]

 Score =  277 bits (709), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 140/173 (80%), Positives = 150/173 (86%), Gaps = 12/173 (6%)

Query: 4   MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-----------RLSRF 52
           M SS SS RGI AIVGVGP LGR IARKFAHEGYTVAILARDLG           RLSRF
Sbjct: 1   MASSASS-RGIVAIVGVGPKLGRCIARKFAHEGYTVAILARDLGTPPLSLLPSFGRLSRF 59

Query: 53  ADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEIS 112
           ADEIAREEK+QVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPV W PT+FT+I 
Sbjct: 60  ADEIAREEKAQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVPWHPTSFTDIH 119

Query: 113 FDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
            DSFQKS+A+SS+GAFLCAQQV+ GMV+R KGTI+FTGCSASLNGIAG+SELC
Sbjct: 120 IDSFQKSLAVSSIGAFLCAQQVIPGMVDRRKGTILFTGCSASLNGIAGYSELC 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563646|ref|XP_003550072.1| PREDICTED: uncharacterized oxidoreductase yoxD-like [Glycine max]

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 130/153 (84%), Positives = 145/153 (94%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           GIAAIVGVGPNLG SIARKFAHEGYTVAILARDLGRLSRFADEIAREEK+QVFAIRIDCS
Sbjct: 12  GIAAIVGVGPNLGLSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKAQVFAIRIDCS 71

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           DSRSVREAFEGVLSLGFVE+LVYNAYQP+ W P++F ++  +SF++S+A+SS+GAF CAQ
Sbjct: 72  DSRSVREAFEGVLSLGFVEILVYNAYQPLPWCPSSFQDLRIESFERSLAVSSVGAFHCAQ 131

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           QVL GMVERGKGTI+FTGCSASLNGIAG+SELC
Sbjct: 132 QVLPGMVERGKGTILFTGCSASLNGIAGYSELC 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739381|emb|CBI29397.3| unnamed protein product [Vitis vinifera]

 Score =  266 bits (681), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 133/161 (82%), Positives = 143/161 (88%), Gaps = 8/161 (4%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG--------RLSRFADEIAREEKSQV 64
           GI AIVGVGP LGR IARKFAHEGYTVAILARDLG         LSRFADEIAREEK+QV
Sbjct: 69  GIVAIVGVGPKLGRCIARKFAHEGYTVAILARDLGTPPLSLLPSLSRFADEIAREEKAQV 128

Query: 65  FAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISS 124
           FAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPV W PT+FT+I  DSFQKS+A+SS
Sbjct: 129 FAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVPWHPTSFTDIHIDSFQKSLAVSS 188

Query: 125 LGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           +GAFLCAQQV+ GMV+R KGTI+FTGCSASLNGIAG+SELC
Sbjct: 189 IGAFLCAQQVIPGMVDRRKGTILFTGCSASLNGIAGYSELC 229

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18409128|ref|NP_566935.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|16612320|gb|AAL27518.1|AF439850_1 AT3g50560/T20E23_160 [Arabidopsis thaliana] gi|21928097|gb|AAM78077.1| AT3g50560/T20E23_160 [Arabidopsis thaliana] gi|332645160|gb|AEE78681.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  261 bits (668), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 132/167 (79%), Positives = 144/167 (86%), Gaps = 2/167 (1%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
           MRN+ SS S  +GIAA+VGVGP LGRSIARKFAHEGYTVAILARDLGRLSR A+EIAREE
Sbjct: 2   MRNVGSSSSGSKGIAAVVGVGPKLGRSIARKFAHEGYTVAILARDLGRLSRVAEEIAREE 61

Query: 61  KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQP--VSWQPTNFTEISFDSFQK 118
           K+QVFAIRIDC+D RSVREAFEGVLSLGFVEVLVYNAY     S  PT+FT I F SFQ 
Sbjct: 62  KAQVFAIRIDCADPRSVREAFEGVLSLGFVEVLVYNAYHSSYASHHPTSFTHIPFQSFQT 121

Query: 119 SIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           SI++S   AFLCAQQV  GM+E+GKGTI+FTGCSASLNGIAGFSELC
Sbjct: 122 SISVSVFAAFLCAQQVTPGMMEKGKGTILFTGCSASLNGIAGFSELC 168

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
TAIR|locus:2098735	272	AT3G50560 [Arabidopsis thalian	0.988	0.606	0.790	2.9e-64
DICTYBASE|DDB_G0284091	240	DDB_G0284091 [Dictyostelium di	0.898	0.625	0.371	6.3e-21
ASPGD|ASPL0000040045	264	AN3293 [Emericella nidulans (t	0.934	0.590	0.333	8.3e-19
ASPGD|ASPL0000039706	243	AN2694 [Emericella nidulans (t	0.868	0.596	0.362	8.8e-15
FB|FBgn0069973	247	CG40485 [Drosophila melanogast	0.784	0.530	0.286	8.2e-12
FB|FBgn0026268	251	antdh "antdh" [Drosophila mela	0.832	0.553	0.290	1.1e-11
TIGR_CMR|BA_1958	242	BA_1958 "oxidoreductase, short	0.832	0.574	0.305	1.4e-10
UNIPROTKB|G4MPA2	247	MGG_07009 "Oxidoreductase" [Ma	0.862	0.582	0.333	2.8e-10
TIGR_CMR|SO_1683	252	SO_1683 "3-oxoacyl-(acyl-carri	0.880	0.583	0.288	5.2e-10
TIGR_CMR|GSU_1603	246	GSU_1603 "3-oxoacyl-(acyl-carr	0.886	0.601	0.281	1.1e-09

TAIR|locus:2098735 AT3G50560 [Arabidopsis thaliana (taxid:3702)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 132/167 (79%), Positives = 144/167 (86%)

Query:     1 MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
             MRN+ SS S  +GIAA+VGVGP LGRSIARKFAHEGYTVAILARDLGRLSR A+EIAREE
Sbjct:     2 MRNVGSSSSGSKGIAAVVGVGPKLGRSIARKFAHEGYTVAILARDLGRLSRVAEEIAREE 61

Query:    61 KSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQP--VSWQPTNFTEISFDSFQK 118
             K+QVFAIRIDC+D RSVREAFEGVLSLGFVEVLVYNAY     S  PT+FT I F SFQ 
Sbjct:    62 KAQVFAIRIDCADPRSVREAFEGVLSLGFVEVLVYNAYHSSYASHHPTSFTHIPFQSFQT 121

Query:   119 SIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
             SI++S   AFLCAQQV  GM+E+GKGTI+FTGCSASLNGIAGFSELC
Sbjct:   122 SISVSVFAAFLCAQQVTPGMMEKGKGTILFTGCSASLNGIAGFSELC 168

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

DICTYBASE|DDB_G0284091 DDB_G0284091 [Dictyostelium discoideum (taxid:44689)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 58/156 (37%), Positives = 94/156 (60%)

Query:    10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIR 68
             S + +  ++GVG  +G  +A KFA EG++VA+++R+  +L  F   I ++   +  FA+ 
Sbjct:     2 SIKKVCCVIGVGKGIGFGVAEKFAKEGFSVALVSRNKEKLEPFVQTIQKKFGDTGSFAVE 61

Query:    69 IDCSDSRSVREAFEGVLSL--GF-VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
             +D +++ SV + F+ + S   G  ++VL+YNA    S++  +  +   + FQ +   S L
Sbjct:    62 MDATNAESVEKGFKEIRSKINGRPIDVLIYNA--SASFKAVSVEKTDVNDFQNAWKASCL 119

Query:   126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
             GAFL +QQVLS M  +  GTIIFTG +ASL G A F
Sbjct:   120 GAFLTSQQVLSEMYGQQNGTIIFTGATASLRGGASF 155

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ASPGD|ASPL0000040045 AN3293 [Emericella nidulans (taxid:162425)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 53/159 (33%), Positives = 85/159 (53%)

Query:     6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVF 65
             S   S + + A++GVGP +G +++  FA +G+ VA++AR   +L +    I  +  +   
Sbjct:     2 SLNPSSKPVLAVIGVGPGIGEAVSHHFASKGFVVALIARTESKLEKVQKTINDDVGTTAS 61

Query:    66 AIRI-DCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAIS 123
                + D     S++ AF  + + LG V+VL+YNA     + P N  E S + F+    I+
Sbjct:    62 KYYVADARSESSLQSAFAAIKADLGPVDVLIYNAGSR-RFTPRNILETSSEEFENFTRIN 120

Query:   124 SLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
               GAF   + VL  M+ +  GTIIFTG + S+ G AG S
Sbjct:   121 LFGAFFATKCVLPDMLAKSSGTIIFTGATGSIRGNAGVS 159

GO:0005575 "cellular_component" evidence=ND

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

ASPGD|ASPL0000039706 AN2694 [Emericella nidulans (taxid:162425)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 58/160 (36%), Positives = 81/160 (50%)

Query:    12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
             R  A I GVGP  G SIARKFA + Y+V +LAR+        DEI      Q   I  D 
Sbjct:     4 RPFAVIAGVGPGTGASIARKFA-QAYSVVVLARNPSNYHGVVDEI-NSSGGQALGISADV 61

Query:    72 SDSRSVREAFEGVLSLGFVEV----LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
             SDS SV+ AFE + S  + +      V+N+      +P  F E++ + F        +GA
Sbjct:    62 SDSASVQSAFEKI-SQQYKDTPLAAAVFNSGGGFVRKP--FLELTEEEFAGGFKSQGIGA 118

Query:   128 FLCAQQVLSGMVERGKG-----TIIFTGCSASLNGIAGFS 162
             F  A+  L  ++++  G     T+IFTG +AS+ G A FS
Sbjct:   119 FNFAKATLP-LLQKATGLQHPPTLIFTGATASVKGSANFS 157

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

FB|FBgn0069973 CG40485 [Drosophila melanogaster (taxid:7227)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 39/136 (28%), Positives = 69/136 (50%)

Query:    14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
             +A + G    +G +I RK    G  V  LAR + RL +  +E+ ++ +S++  ++ D SD
Sbjct:     8 VAVVTGASSGIGAAITRKLISAGVMVVALARRMDRLEQLREELPQDRRSRLRIMQCDVSD 67

Query:    74 SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               SV   F+ V   LG V++L+ NA +    Q      +S D+ Q+ +  + +G   C Q
Sbjct:    68 VSSVNAVFDAVQGDLGNVDILINNAGKLSGGQ---LLTMSVDTVQQMLQTNVMGVVYCTQ 124

Query:   133 QVLSGMVER-GKGTII 147
             +    M +R  KG ++
Sbjct:   125 RAFESMRQRQSKGHVV 140

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0026268 antdh "antdh" [Drosophila melanogaster (taxid:7227)]

 Score = 159 (61.0 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 43/148 (29%), Positives = 74/148 (50%)

Query:    14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
             ++ + G    +G +IA+     G TV  LAR + R+     E+  E++ ++FA+  D  +
Sbjct:     8 VSVVTGASSGIGSAIAKDLVLAGMTVVGLARRVDRVKELQRELPAEKRGKLFALYCDVGN 67

Query:    74 SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               SV EAF+ ++  LG ++VLV NA    + QP    +++    Q+ +  + +G  LC Q
Sbjct:    68 ESSVNEAFDWIIQKLGAIDVLVNNAG---TLQPGYLVDMNPAVMQQVLQTNIMGIVLCTQ 124

Query:   133 QVLSGMVERGKGTIIFTGCSASLNGIAG 160
             + +  M ER      F G    +N I G
Sbjct:   125 RAVRSMRERK-----FDGHVVLINSILG 147

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TIGR_CMR|BA_1958 BA_1958 "oxidoreductase, short-chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 149 (57.5 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 44/144 (30%), Positives = 68/144 (47%)

Query:    15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
             A I G G  +GR++A   A EG  V +LAR    L   A E+  E    V A   D S  
Sbjct:    13 ALITGAGRGIGRAVAIALAKEGVNVGLLARSEENLKAVAKEVEAEGVKAVIATA-DVSSY 71

Query:    75 RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
               V  A E + + LG +++L+ NA   +S +   F E+    ++K I ++ +G +   + 
Sbjct:    72 EEVTTAIETLKNGLGSIDILINNA--GIS-KFGKFLELDVADWEKIIQVNLMGVYYATRA 128

Query:   134 VLSGMVERGKGTIIFTGCSASLNG 157
              L  M+E+  G II    +A   G
Sbjct:   129 ALPSMIEQQSGDIINISSTAGQKG 152

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|G4MPA2 MGG_07009 "Oxidoreductase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 147 (56.8 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 52/156 (33%), Positives = 75/156 (48%)

Query:    15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
             A + GVGP  GR+ A + A + Y V +LAR     +    EI     S V  I  D SD+
Sbjct:     8 AIVAGVGPGTGRAAALRLA-KAYPVVLLARKPDSYNDLVAEIKSGGGSAV-GISADTSDA 65

Query:    75 RSVREAFEGV---LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
              SVR AF  +   L    +   VYN     + +P  F E S +  + S++ ++ G F  A
Sbjct:    66 GSVRSAFAAIKNELPDSKLAAAVYNVGTGFAIKP--FLEHSAEELESSLSANAGGLFNFA 123

Query:   132 QQVLSGMVERGKG-----TIIFTGCSASLNGIAGFS 162
             Q  +  ++E   G     T+I TG +ASL G A F+
Sbjct:   124 QSSIPLLLESVDGAPHPPTLIVTGATASLKGSARFA 159

GO:0005575 "cellular_component" evidence=ND

TIGR_CMR|SO_1683 SO_1683 "3-oxoacyl-(acyl-carrier-protein) reductase, putative" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 145 (56.1 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 45/156 (28%), Positives = 72/156 (46%)

Query:    14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
             +  I G    LG ++A  FA  G  +A++  D  +L R   ++    + Q +A+  D +D
Sbjct:     7 VVVITGGAGGLGLAMAHNFAQAGAKLALIDVDQDKLERACADLGSSTEVQGYAL--DITD 64

Query:    74 SRSVREAFEGVLS-LGFVEVLVYNAY-----QPVSWQPTNFTE-ISFDSFQKSIAISSLG 126
                V   F  +L   G + VLV NA        V  +    T+ +SFD FQ  I ++  G
Sbjct:    65 EEDVVAGFAYILEDFGKINVLVNNAGILRDGMLVKAKDGKVTDRMSFDQFQSVINVNLTG 124

Query:   127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
              FLC ++  + M+E G+  +I    S +  G  G S
Sbjct:   125 TFLCGREAAAAMIESGQAGVIVNISSLAKAGNVGQS 160

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1603 GSU_1603 "3-oxoacyl-(acyl-carrier-protein) reductase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 142 (55.0 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 43/153 (28%), Positives = 70/153 (45%)

Query:    14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
             IA + G    +GR IA + A EG  VA+ A  L    + ADEI +  + +  A+ +D +D
Sbjct:     7 IAVVTGASRGIGREIALRLAREGADVAVTATTLDSARKTADEIEQIGR-RALALAVDVAD 65

Query:    74 SRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             + +V   F  V+ + G V++LV NA            +  +D+    + ++  GAF C +
Sbjct:    66 AAAVEALFASVVEAFGKVDILVNNAGITRDGLLLRMKDADWDAV---LDVNLKGAFNCTR 122

Query:   133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
             +    M +   G I+  G      G AG    C
Sbjct:   123 EAAKLMTKARSGRIVNIGSVVGEMGNAGQVNYC 155

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.V.3913.1 hypothetical protein (250 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	167
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-36
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-25
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-18
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-18
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	6e-18
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-17
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-16
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-16
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-16
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-15
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-15
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-15
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-15
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-14
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-14
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-14
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	5e-14
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-14
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	9e-14
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	9e-14
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-13
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-13
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-13
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-13
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-13
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-13
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-13
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-13
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-13
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-13
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	7e-13
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	9e-13
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	9e-13
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-12
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-12
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-12
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-12
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-12
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	4e-12
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	7e-12
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	7e-12
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-12
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-11
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-11
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-11
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-11
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	4e-11
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-11
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	6e-11
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-11
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-11
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	7e-11
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	7e-11
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	7e-11
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-11
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-10
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-10
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-10
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-10
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-10
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-10
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-10
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	6e-10
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-10
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-10
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	9e-10
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-09
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-09
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-09
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	8e-09
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	9e-09
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-08
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-08
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-08
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-08
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-08
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-08
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-08
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-08
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	6e-08
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	6e-08
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	7e-08
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	7e-08
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	7e-08
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-08
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	9e-08
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-07
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-07
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-07
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-07
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-07
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-07
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-07
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-07
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-07
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-07
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-07
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-07
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-07
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	5e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	6e-07
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-07
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-07
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	7e-07
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	8e-07
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	9e-07
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-06
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-06
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-06
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-06
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-06
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-06
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-06
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-06
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-06
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	5e-06
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-06
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	6e-06
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	6e-06
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-06
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-05
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-05
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-05
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-05
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-05
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-05
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-05
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	4e-05
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	4e-05
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-05
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	6e-05
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	6e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	7e-05
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-04
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-04
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-04
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-04
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	3e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	3e-04
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	4e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	4e-04
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	5e-04
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-04
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	6e-04
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	7e-04
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	7e-04
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	8e-04
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	8e-04
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	9e-04
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	0.001
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	0.001
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	0.001
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	0.001
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	0.001
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	0.001
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	0.001
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	0.001
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	0.001
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	0.002
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	0.002
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	0.002
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	0.002
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	0.002
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	0.002
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	0.003
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	0.004
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	0.004
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.004
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	0.004

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score =  125 bits (316), Expect = 2e-36
 Identities = 61/150 (40%), Positives = 87/150 (58%), Gaps = 4/150 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +AA+VG G  LG +IAR+FA EG++VA+ AR   +L     +I R+      A+  D  D
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V   F+ +   +G +EVLVYNA   V W P    E +   F+K   +++ G FL A+
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGANV-WFP--ILETTPRVFEKVWEMAAFGGFLAAR 117

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +    M+ RG+GTIIFTG +ASL G AGF+
Sbjct: 118 EAAKRMLARGRGTIIFTGATASLRGRAGFA 147

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 95.4 bits (238), Expect = 7e-25
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +GR+IAR+ A EG  V +  R+   L+  A            A++ D SD 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA--IEALGGNAVAVQADVSDE 58

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             V    E  L   G +++LV NA      +P    E++ + + + + ++  G FL  + 
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAG---IARPGPLEELTDEDWDRVLDVNLTGVFLLTRA 115

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            L  M ++G G I+     A L  + G +
Sbjct: 116 ALPHMKKQGGGRIVNISSVAGLRPLPGQA 144

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 79.6 bits (197), Expect = 1e-18
 Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +G  +A++ A  GY + ++AR   +L   A E+  +   +V  I  D SD 
Sbjct: 9   ALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP 68

Query: 75  RSV-REAFEGVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            ++ R   E     G ++VLV NA    + P       F E+S D  ++ I ++ L    
Sbjct: 69  EALERLEDELKERGGPIDVLVNNAGFGTFGP-------FLELSLDEEEEMIQLNILALTR 121

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIA 159
             + VL GMVERG G II  G +A L    
Sbjct: 122 LTKAVLPGMVERGAGHIINIGSAAGLIPTP 151

Length = 265

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 79.7 bits (197), Expect = 1e-18
 Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 5/136 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCS 72
           +A + G    +G +IAR FA EG  VA+   D     R A  IAR+   ++V A+  D +
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT 68

Query: 73  DSRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D+ SV  A      + G ++VLV NA   V   P   T+   + +++  A+   GA+   
Sbjct: 69  DAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTD---EDWRRCFAVDLDGAWNGC 125

Query: 132 QQVLSGMVERGKGTII 147
           + VL GMVERG+G+I+
Sbjct: 126 RAVLPGMVERGRGSIV 141

Length = 260

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 77.4 bits (191), Expect = 6e-18
 Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 4/148 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  I G    +G++  +     G  + +   +   L +  +E+    K++V A+ +D + 
Sbjct: 4   IILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDITS 63

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             S++E  E  L   G +++L+ NAY       + F E  ++ + + + ++  GAFLC+Q
Sbjct: 64  KESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCSQ 123

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAG 160
             +    ++GKG+II     AS+ G+  
Sbjct: 124 AFIKLFKKQGKGSIINI---ASIYGVIA 148

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 75.3 bits (186), Expect = 4e-17
 Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 7/142 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +GR+IA + A +G  V ++       +  A+ +      +  A ++D  D
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELV-EAAGGKARARQVDVRD 66

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
             +++ A   GV   G +++LV NA   P     T F E+  + +++ I ++  G FL  
Sbjct: 67  RAALKAAVAAGVEDFGRLDILVANAGIFP----LTPFAEMDDEQWERVIDVNLTGTFLLT 122

Query: 132 QQVLSGMVERGKGTIIFTGCSA 153
           Q  L  ++  G G I+ T   A
Sbjct: 123 QAALPALIRAGGGRIVLTSSVA 144

Length = 251

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.0 bits (182), Expect = 1e-16
 Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 5/150 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A I G G  +GR++A   A EG  V +LAR    L   A+E+       V A   D SD
Sbjct: 9   NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIAT-ADVSD 67

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V  A E + + LG +++L+ NA   +S +   F E+    ++K I ++ +G +   +
Sbjct: 68  YEEVTAAIEQLKNELGSIDILINNA--GIS-KFGKFLELDPAEWEKIIQVNLMGVYYATR 124

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            VL  M+ER  G II    +A   G A  S
Sbjct: 125 AVLPSMIERQSGDIINISSTAGQKGAAVTS 154

Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 8/148 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +GR+IA + A EG  VA+  R     +    E  +       A+  D SD
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAE-TVEEIKALGGNAAALEADVSD 60

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +V    E V +  G V++LV NA   ++ +      +S + +   I ++  G F   Q
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNA--GIT-RDNLLMRMSEEDWDAVINVNLTGVFNVTQ 117

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAG 160
            V+  M++R  G II     +S+ G+ G
Sbjct: 118 AVIRAMIKRRSGRII---NISSVVGLIG 142

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 73.1 bits (180), Expect = 3e-16
 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 6/135 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+V      +G +IAR  A EG  VAI AR+   L R A E+       V A+  D +D 
Sbjct: 4   ALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAG-VLAVVADLTDP 62

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             +    E      G V++LV NA  P    P  F E++ + + ++  +  L      + 
Sbjct: 63  EDIDRLVEKAGDAFGRVDILVNNAGGP---PPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 134 VLSGMVERGKGTIIF 148
           VL GM ERG G I+ 
Sbjct: 120 VLPGMKERGWGRIVN 134

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 71.3 bits (176), Expect = 1e-15
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 8/138 (5%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +GR+IA + A +G  V I   +       A E+ R    +   +  D SD  +VR   E 
Sbjct: 17  IGRAIALRLAADGAKVVIYDSNEEAAEALAAEL-RAAGGEARVLVFDVSDEAAVRALIEA 75

Query: 84  VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
            + + G +++LV NA   ++ +      +S + + + I ++  G F   +  L  M++  
Sbjct: 76  AVEAFGALDILVNNA--GIT-RDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR 132

Query: 143 KGTIIFTGCSASLNGIAG 160
            G I+      S++G+ G
Sbjct: 133 YGRIVNIS---SVSGVTG 147

Length = 246

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +G++ A  FA  G+ +A++AR    L   A E+ R    +  A  ID S+ 
Sbjct: 9   ALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAEL-RSTGVKAAAYSIDLSNP 67

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            ++      +L   G  +VL+ NA   +++      E+    +Q  I ++    F C   
Sbjct: 68  EAIAPGIAELLEQFGCPDVLINNA--GMAYT-GPLLEMPLSDWQWVIQLNLTSVFQCCSA 124

Query: 134 VLSGMVERGKGTII 147
           VL GM  RG G II
Sbjct: 125 VLPGMRARGGGLII 138

Length = 241

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 71.0 bits (174), Expect = 2e-15
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 9/153 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILAR--DLGRLSRFADEIAREEKSQVFAIRIDC 71
           +A + G    +GR+IAR  A EG  V + AR  +       A  I      +  A+  D 
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADV 66

Query: 72  SDSR-SVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
           SD   SV           G +++LV NA       P    E++ + + + I ++ LGAFL
Sbjct: 67  SDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAP--LEELTEEDWDRVIDVNLLGAFL 124

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             +  L  M    K  I+     A L G  G +
Sbjct: 125 LTRAALPLMK---KQRIVNISSVAGLGGPPGQA 154

Length = 251

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 70.0 bits (172), Expect = 3e-15
 Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 7/153 (4%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI---AREEKSQVFAIRIDCSD 73
           I G    +G+++A++   EG  V I+AR   +L    +EI   A     +V  I  D SD
Sbjct: 6   ITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADLSD 65

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V +AF + V   G  +++V  A   +   P  F +++ + F++ + ++  G+   A 
Sbjct: 66  YEEVEQAFAQAVEKGGPPDLVVNCAGISI---PGLFEDLTAEEFERGMDVNYFGSLNVAH 122

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
            VL  M E+  G I+F    A+L GI G+S  C
Sbjct: 123 AVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYC 155

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 4e-15
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCS 72
           +A ++G G  LG  +    A EGY VA+   +  + +  A EI  E  +   +    D +
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT 63

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
             +SV     GV    G V++LVYNA    +      T+     F +S+ ++ +G FLCA
Sbjct: 64  SEQSVLALSRGVDEIFGRVDLLVYNAGIAKA---AFITDFQLGDFDRSLQVNLVGYFLCA 120

Query: 132 QQVLSGMVERG-KGTII 147
           ++    M+  G +G II
Sbjct: 121 REFSRLMIRDGIQGRII 137

Length = 259

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.3 bits (168), Expect = 2e-14
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 13/149 (8%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AIV G    +G  IAR+FA EG  V +  R+     R A EI      +  A+  D SD 
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG--RAIAVAADVSDE 65

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTN--FTEISFDSFQKSIAISSLGAFLCA 131
             V  A    L   G V++LV NA         N    ++    F +  A++    +L  
Sbjct: 66  ADVEAAVAAALERFGSVDILVNNA----GTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT 121

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           Q  +  M   G G I+     AS  G+  
Sbjct: 122 QAAVPAMRGEGGGAIVNV---ASTAGLRP 147

Length = 251

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 67.9 bits (166), Expect = 2e-14
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 7/150 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G G  +G + A + A EG  V +   D G     A  +  +      A+R+D +D
Sbjct: 5   VAIVTGAGAGIGAACAARLAREGARVVVADIDGGA----AQAVVAQIAGGALALRVDVTD 60

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            + V   FE  V   G +++LV NA   +   P    +     + +++AI+  G FLC +
Sbjct: 61  EQQVAALFERAVEEFGGLDLLVNNA-GAMHLTPA-IIDTDLAVWDQTMAINLRGTFLCCR 118

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
                M+ RG G+I+     A  +G  G+ 
Sbjct: 119 HAAPRMIARGGGSIVNLSSIAGQSGDPGYG 148

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 4e-14
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G    +G+++AR+F   G  V  L  D   L+ FAD +      +   +  D +D
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA---RFVPVACDLTD 60

Query: 74  SRSVREAFEG-VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           + S+  A        G V+VLV NA    +    +  + +  S++   A++   A+LC +
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARA---ASLHDTTPASWRADNALNLEAAYLCVE 117

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
            VL GM++R +G ++  G   S+NG+A  
Sbjct: 118 AVLEGMLKRSRGAVVNIG---SVNGMAAL 143

Length = 257

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 66.7 bits (163), Expect = 5e-14
 Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 9/142 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +  + G    LG +IAR FA EG  V +   R        A+ +A E   +  AI+ D  
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTES----AEAVAAEAGERAIAIQADVR 57

Query: 73  DSRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTN---FTEISFDSFQKSIAISSLGAF 128
           D   V+    E     G V+ +V NA     + P     F  I ++ +Q+ +  +  GA 
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117

Query: 129 LCAQQVLSGMVERGKGTIIFTG 150
              Q VL    ERG G +I  G
Sbjct: 118 NLLQAVLPDFKERGSGRVINIG 139

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 7e-14
 Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 28/167 (16%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +G +IA     EGY VAI ARD   L   A E+    K  V  +  D  D 
Sbjct: 9   ALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAEL--NNKGNVLGLAADVRDE 66

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
             V+ A + +++  G ++VL+ NA    + PV        E++ + ++  I  +  GAF 
Sbjct: 67  ADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVE-------ELTPEEWRLVIDTNLTGAFY 119

Query: 130 CAQQVLSGMVERGKGTII----------FTGCS---ASLNGIAGFSE 163
             +  +  +  RG G II          F G +   AS  G+ GFSE
Sbjct: 120 TIKAAVPALK-RGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSE 165

Length = 237

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 9e-14
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 5/135 (3%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           + GVGP LGR++A + A  G  V + AR   RL   A EI  +   +  A+  D +D   
Sbjct: 10  VSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEI-DDLGRRALAVPTDITDEDQ 68

Query: 77  VRE-AFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
                   +   G V+ LV NA++  S +P    +  F  ++  I ++ LG     Q   
Sbjct: 69  CANLVALALERFGRVDALVNNAFRVPSMKP--LADADFAHWRAVIELNVLGTLRLTQAFT 126

Query: 136 SGMVERGKGTIIFTG 150
             + E G G+I+   
Sbjct: 127 PALAESG-GSIVMIN 140

Length = 258

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 66.0 bits (161), Expect = 9e-14
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 16/151 (10%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +G + AR    EGY V I ARD  RL       A +E   V  +  D  D 
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARL----AAAAAQELEGVLGLAGDVRDE 58

Query: 75  RSVREAFEGVL-SLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
             VR A + +  + G ++ LV NA     +PV        E++ + ++  +  +  GAF 
Sbjct: 59  ADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVE-------ELTPEEWRLVLDTNLTGAFY 111

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           C  +    ++ RG GTI+  G  A  N   G
Sbjct: 112 CIHKAAPALLRRGGGTIVNVGSLAGKNAFKG 142

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 16/135 (11%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +G ++A ++  EG  V I      R    A   A E      A+ +D +  
Sbjct: 9   ALLTGAASGIGEAVAERYLAEGARVVIADIKPAR----ARLAALEIGPAAIAVSLDVTRQ 64

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            S+       +   G +++L  NA      P+        +IS DS+ +  A++  G F 
Sbjct: 65  DSIDRIVAAAVERFGGIDILFNNAALFDMAPI-------LDISRDSYDRLFAVNVKGLFF 117

Query: 130 CAQQVLSGMVERGKG 144
             Q V   MVE+G+G
Sbjct: 118 LMQAVARHMVEQGRG 132

Length = 257

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 65.6 bits (161), Expect = 2e-13
 Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 10/151 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ---VFAIRID 70
           +A + G    +GR+IA + A +G  V I           A+ +  E  +      A++ D
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYA---SSEAGAEALVAEIGALGGKALAVQGD 63

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            SD+ SV  A +   +  G V++LV NA   ++ +      +  + + + I  +  G F 
Sbjct: 64  VSDAESVERAVDEAKAEFGGVDILVNNA--GIT-RDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             + V   M+++  G II       L G  G
Sbjct: 121 LTKAVARPMMKQRSGRIINISSVVGLMGNPG 151

Length = 248

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G +IAR  A  G  VAI+     R    A+E+A++   +  A + D S 
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSS 69

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             SV + F+ +    G +++L+ NA   ++       + +++ + K I ++  G F CAQ
Sbjct: 70  QESVEKTFKQIQKDFGKIDILIANA--GITV-HKPALDYTYEQWNKVIDVNLNGVFNCAQ 126

Query: 133 QVLSGMVERGKGTIIFTGCSASLNG-IAGFSELC 165
                  ++GKG++I T   AS++G I    +  
Sbjct: 127 AAAKIFKKQGKGSLIIT---ASMSGTIVNRPQPQ 157

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 65.3 bits (159), Expect = 2e-13
 Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G G  +G +  R+FA EG  VA+   +     + A +I R +     A   D +D
Sbjct: 5   TAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI-RAKGGNAQAFACDITD 63

Query: 74  SRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCA 131
             SV  A      +LG V+VLV NA     W     FT+     +++ IAI+  GA    
Sbjct: 64  RDSVDTAVAAAEQALGPVDVLVNNA----GWDKFGPFTKTEPPLWERLIAINLTGALHMH 119

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             VL GMVERG G I+     A+  G +G
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVGSSG 148

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 66.0 bits (161), Expect = 3e-13
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI-ARE 59
           +R M    +  R +A + G    +GR  AR+ A EG  V +   +L      A EI  + 
Sbjct: 403 LRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF 462

Query: 60  EKSQVFAIRIDCSDSRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQK 118
              +  A+++D +D ++V+ AF  V L+ G V+++V NA    S   + F E +   +Q 
Sbjct: 463 GAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS---SPFEETTLQEWQL 519

Query: 119 SIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIA 159
           ++ I + G FL A++    M E+G  G I+F    AS N + 
Sbjct: 520 NLDILATGYFLVAREAFRQMREQGLGGNIVFI---ASKNAVY 558

Length = 676

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 65.1 bits (159), Expect = 3e-13
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 8/145 (5%)

Query: 13  GIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           G  AIV G G   G  IAR+FA EG  V I   +     R A +I         AI+ D 
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIG----EAAIAIQADV 60

Query: 72  SDSRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +    V    E  LS  G +++LV NA   ++ +     E+  + F +  A++    +L 
Sbjct: 61  TKRADVEAMVEAALSKFGRLDILVNNA--GITHRNKPMLEVDEEEFDRVFAVNVKSIYLS 118

Query: 131 AQQVLSGMVERGKGTIIFTGCSASL 155
           AQ ++  M E+G G II    +A L
Sbjct: 119 AQALVPHMEEQGGGVIINIASTAGL 143

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 65.2 bits (159), Expect = 3e-13
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 5/140 (3%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           R  A + G    +G + A + A  G+ VA+ AR + +     D+I R +  +  A  +D 
Sbjct: 10  RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKI-RADGGEAVAFPLDV 68

Query: 72  SDSRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +D  SV+    +   +LG +EVLV  A            EIS + F+  + I  +GA   
Sbjct: 69  TDPDSVKSFVAQAEEALGEIEVLVSGAGDT---YFGKLHEISTEQFESQVQIHLVGANRL 125

Query: 131 AQQVLSGMVERGKGTIIFTG 150
           A  VL GM+ER +G +IF G
Sbjct: 126 ATAVLPGMIERRRGDLIFVG 145

Length = 274

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 64.7 bits (158), Expect = 4e-13
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 14/153 (9%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           A + G    +G++IA + A  G  V I   +     +  A EI  E   +   +R D S 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEI-EELGGKAVVVRADVSQ 59

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
            + V E F  V    G ++VLV NA    ++P+S       E++   +   +  +     
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLS-------ELTPAHWDAKMNTNLKALV 112

Query: 129 LCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
            CAQQ    M ERG G I+      S+  +  +
Sbjct: 113 HCAQQAAKLMRERGGGRIVAISSLGSIRALPNY 145

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.5 bits (158), Expect = 4e-13
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +A + G    +GR+IA   A EG  V I    +        +EI +EE     A++ D S
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI-KEEGGDAIAVKADVS 65

Query: 73  DSRSVREAFEGVLSL-GFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
               V    E ++   G +++LV NA    +          T+++ + + + I ++  G 
Sbjct: 66  SEEDVENLVEQIVEKFGKIDILVNNAGISNFGL-------VTDMTDEEWDRVIDVNLTGV 118

Query: 128 FLCAQQVLSGMVERGKGTII 147
            L  +  L  M++R  G I+
Sbjct: 119 MLLTRYALPYMIKRKSGVIV 138

Length = 247

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 1/141 (0%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +G++ A + A  G+ V +++R   +L   A EI  +   +   I  D S  
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63

Query: 75  RSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQV 134
             + E  E  L    + +LV N     S  P  F E   D  Q  I ++ +      + +
Sbjct: 64  DDIYERIEKELEGLDIGILVNNVGISHSI-PEYFLETPEDELQDIINVNVMATLKMTRLI 122

Query: 135 LSGMVERGKGTIIFTGCSASL 155
           L GMV+R KG I+     A L
Sbjct: 123 LPGMVKRKKGAIVNISSFAGL 143

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 64.9 bits (159), Expect = 7e-13
 Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 10/148 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G++ A++ A EG  V +   D       A E+      +   +  D +D
Sbjct: 424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG--GPDRALGVACDVTD 481

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +V+ AFE   L+ G V+++V NA   ++       E S + +++S  +++ G FL A+
Sbjct: 482 EAAVQAAFEEAALAFGGVDIVVSNA--GIAISGP-IEETSDEDWRRSFDVNATGHFLVAR 538

Query: 133 QVLSGMVERGKG-TIIFTGCSASLNGIA 159
           + +  M  +G G +I+F    AS N + 
Sbjct: 539 EAVRIMKAQGLGGSIVFI---ASKNAVN 563

Length = 681

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 63.6 bits (155), Expect = 9e-13
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
             +A ++G G  LG  +    A  GY VA+   +     + ADEI  E   + +    D 
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADA 61

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           ++ +SV    +GV      V++LVY+A    S + T+F       F +S+ ++ +G FLC
Sbjct: 62  TNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDF---ELGDFDRSLQVNLVGYFLC 118

Query: 131 AQQVLSGMVERG-KGTII 147
           A++    M+  G +G II
Sbjct: 119 AREFSKLMIRDGIQGRII 136

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 9e-13
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IA   A EG  V I   +    +  A+ +  +   +   + +D +D
Sbjct: 6   VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQ-KAGGKAIGVAMDVTD 64

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
             ++    +  +   G V++LV NA  Q V+       +   + ++K IAI   GAFL  
Sbjct: 65  EEAINAGIDYAVETFGGVDILVNNAGIQHVA----PIEDFPTEKWKKMIAIMLDGAFLTT 120

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           +  L  M  +G G II     AS++G+ G 
Sbjct: 121 KAALPIMKAQGGGRIINM---ASVHGLVGS 147

Length = 258

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 17/147 (11%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDL------------GRLSRFADEIAREEK 61
           +A + G    +GR+IA + A  G TV + A+              G +   A+EI     
Sbjct: 5   VAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEI-EAAG 63

Query: 62  SQVFAIRIDCSDSRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSI 120
            Q   I +D  D   VR   E  +   G +++LV NA     W  +   +     F    
Sbjct: 64  GQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAG--AIWL-SLVEDTPAKRFDLMQ 120

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTII 147
            ++  G +L +Q  L  MV+ G+G I+
Sbjct: 121 RVNLRGTYLLSQAALPHMVKAGQGHIL 147

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 14/163 (8%)

Query: 2   RNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK 61
            ++       R    + G    +GR+IA  FA  G  V +       L+  A   AR   
Sbjct: 3   IDLLKPLDGLR--VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA---ARLPG 57

Query: 62  SQVFAIRIDCSDSRSVREAFE-GVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQK 118
           ++V A   D +D   V   F+  V   G ++VLV NA    P         EI+ + +++
Sbjct: 58  AKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGI----DEITPEQWEQ 113

Query: 119 SIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           ++A++  G F  A+  +  +   G G +I    S +  G  G+
Sbjct: 114 TLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVA--GRLGY 154

Length = 264

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 19/153 (12%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              I G    +G + AR+FA  G  + +  R   RL   ADE+  +   +V  +++D SD
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVSD 61

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-----YQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
             S+  A E +      +++LV NA       P         E   + ++  I  +  G 
Sbjct: 62  RESIEAALENLPEEFRDIDILVNNAGLALGLDPAQ-------EADLEDWETMIDTNVKGL 114

Query: 128 FLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
               + +L  M+ R +G II      +L  IAG
Sbjct: 115 LNVTRLILPIMIARNQGHII------NLGSIAG 141

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 62.6 bits (153), Expect = 2e-12
 Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 8/147 (5%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G ++A   A +GY V   AR+  +L    + +       +  + +D +D  S
Sbjct: 5   ITGCSSGIGLALALALAAQGYRVIATARNPDKL----ESLGELLNDNLEVLELDVTDEES 60

Query: 77  VREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           ++ A + V+   G ++VLV NA   +        E S +  ++   ++  G     +  L
Sbjct: 61  IKAAVKEVIERFGRIDVLVNNAGYGLFG---PLEETSIEEVRELFEVNVFGPLRVTRAFL 117

Query: 136 SGMVERGKGTIIFTGCSASLNGIAGFS 162
             M ++G G I+     A L       
Sbjct: 118 PLMRKQGSGRIVNVSSVAGLVPTPFLG 144

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 62.2 bits (152), Expect = 3e-12
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 14/147 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  LG ++A++ A  G  VAIL R+  +      EI +    +  A++ D  D
Sbjct: 12  VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEI-KAAGGEALAVKADVLD 70

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-----------YQPVSWQPT-NFTEISFDSFQKSI 120
             S+ +A + +L   G  ++L+  A                 +PT  F ++  + F+   
Sbjct: 71  KESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVF 130

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTII 147
            ++ LG  L  Q     MV R  G II
Sbjct: 131 DLNLLGTLLPTQVFAKDMVGRKGGNII 157

Length = 278

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 61.8 bits (151), Expect = 4e-12
 Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 12/139 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  +G++IA+ FA  G +VAI  R    L   A+EI+     +   I+ D  D
Sbjct: 5   VAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDVRD 64

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNF----TEISFDSFQKSIAISSLGAF 128
             +V  A +  L   G +++L+ NA         NF      +S + F+  I I   G F
Sbjct: 65  PEAVEAAVDETLKEFGKIDILINNA-------AGNFLAPAESLSPNGFKTVIDIDLNGTF 117

Query: 129 LCAQQVLSGMVERGKGTII 147
              + V   ++E   G  I
Sbjct: 118 NTTKAVGKRLIEAKHGGSI 136

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 61.2 bits (148), Expect = 7e-12
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 7/144 (4%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +G+ +A  +   G  VAI AR L  L + ADEI      +V  +  D S  
Sbjct: 12  ALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG-TSGGKVVPVCCDVSQH 70

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           + V    + V + LG +++ V NA   ++  P    ++  + FQ+    +  G FL AQ 
Sbjct: 71  QQVTSMLDQVTAELGGIDIAVCNA-GIITVTP--MLDMPLEEFQRLQNTNVTGVFLTAQA 127

Query: 134 VLSGMVERGKGTIIFTGCSASLNG 157
               MV++G+G +I    +AS++G
Sbjct: 128 AAKAMVKQGQGGVIIN--TASMSG 149

Length = 253

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 61.1 bits (149), Expect = 7e-12
 Identities = 46/149 (30%), Positives = 61/149 (40%), Gaps = 15/149 (10%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +G + AR  A  G  V + AR   RL   ADEI         A+ +D +D
Sbjct: 8   VALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI---GAGAALALALDVTD 64

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNAYQ-PVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
             +V  A E      G +++LV NA             E   D + + I  +  G     
Sbjct: 65  RAAVEAAIEALPEEFGRIDILVNNAGLALGD----PLDEADLDDWDRMIDTNVKGLLNGT 120

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           + VL GMVER  G II  G       IAG
Sbjct: 121 RAVLPGMVERKSGHIINLG------SIAG 143

Length = 246

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 61.8 bits (150), Expect = 8e-12
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 8/150 (5%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
             +  + G    +GR+  ++FA  G  V +  R++ R    AD +  +      A+ +D 
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHH----ALAMDV 60

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           SD   +RE FE +    G ++VLV NA        T   + + + F +  AI+  GA+L 
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNA-GVTDPTMTATLDTTLEEFARLQAINLTGAYLV 119

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           A++ L  M+E+G G  I     AS  G+  
Sbjct: 120 AREALRLMIEQGHGAAIVN--VASGAGLVA 147

Length = 520

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 22/162 (13%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +G  +A   A  G  + + AR   RL     E           + +D SD     +  E 
Sbjct: 15  IGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPLDMSDLEDAEQVVEE 74

Query: 84  VLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
            L   G +++L+ NA        + F + S D  +K + ++  G     +  L  ++ER 
Sbjct: 75  ALKLFGGLDILINNA---GISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALPHLIERS 131

Query: 143 KGTIIF-------------TGCSASLNGIAGF-----SELCK 166
           +G+I+              T  +AS + + GF     +EL +
Sbjct: 132 QGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSE 173

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 6/153 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G G  +GR+ A+ FA EG  V +  RD     R A  IA   ++     + D   
Sbjct: 7   VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFAR--QGDVGS 64

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           + +V    + V +  G ++VLV NA            E  +D+    + ++  G FL A+
Sbjct: 65  AEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAV---MRVNVGGVFLWAK 121

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
             +  M  +G G+I+ T    +L G  G +   
Sbjct: 122 YAIPIMQRQGGGSIVNTASQLALAGGRGRAAYV 154

Length = 252

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 60.3 bits (147), Expect = 1e-11
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 5/153 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  I G G  +GR +A +FA  G  V IL  +       A+ + R+   +V   + D S 
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNV-RKAGGKVHYYKCDVSK 59

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V EA + +   +G V +L+ NA            E+  +  +K+  +++L  F   +
Sbjct: 60  REEVYEAAKKIKKEVGDVTILINNAGVV---SGKKLLELPDEEIEKTFEVNTLAHFWTTK 116

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
             L  M+ER  G I+     A L   AG ++ C
Sbjct: 117 AFLPDMLERNHGHIVTIASVAGLISPAGLADYC 149

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 8/142 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    LG +IAR FA EG  V +   +  +    A+ +A E   +  A++ D +D
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVV---NYHQSEDAAEALADELGDRAIALQADVTD 63

Query: 74  SRSVREAFE-GVLSLG-FVEVLVYNAYQPVSWQPTN---FTEISFDSFQKSIAISSLGAF 128
              V+  F       G  +  +V NA    S+         +I+++ FQ+ +  S  GA 
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 129 LCAQQVLSGMVERGKGTIIFTG 150
              Q  L GM E+G G II  G
Sbjct: 124 NTIQAALPGMREQGFGRIINIG 145

Length = 253

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 58.8 bits (143), Expect = 4e-11
 Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 6/148 (4%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           A + G    +GR+IA K A EG  V I             +E+ +    +   +  D SD
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL-KAYGVKALGVVCDVSD 59

Query: 74  SRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V+   E +   LG +++LV NA            E  +D+    I  +  G F   Q
Sbjct: 60  REDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAV---IDTNLTGVFNLTQ 116

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAG 160
            VL  M+++  G II       L G AG
Sbjct: 117 AVLRIMIKQRSGRIINISSVVGLMGNAG 144

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 6e-11
 Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 13/152 (8%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           R +  I G    +GR+ AR FA  G  V +LAR    L   A EI R    +  A+  D 
Sbjct: 8   RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI-RAAGGEALAVVADV 66

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLG 126
           +D+ +V+ A +     LG ++  V NA    + P       F +++ + F++   ++ LG
Sbjct: 67  ADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGP-------FEDVTPEEFRRVTEVTYLG 119

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGI 158
                   L  M  R +G II  G + +   I
Sbjct: 120 VVHGTLAALRHMRPRDRGAIIQVGSALAYRSI 151

Length = 334

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 6e-11
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 18/156 (11%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +GR+ A+ FA EG  V + AR    L +   EI R E  +  A+  D  D
Sbjct: 8   VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEI-RAEGGEAVALAGDVRD 66

Query: 74  ----SRSVREAFE--GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
                  V  A E  G L + F          PV        E+S + +++++A +   A
Sbjct: 67  EAYAKALVALAVERFGGLDIAFNNAGTLGEMGPV-------AEMSLEGWRETLATNLTSA 119

Query: 128 FLCAQQVLSGMVERGKGTIIFT----GCSASLNGIA 159
           FL A+  +  M+ RG G++IFT    G +A   G+A
Sbjct: 120 FLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMA 155

Length = 254

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 6e-11
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 8/153 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G +IA  FA +G  VA+L R        A+  A+        +  D SD
Sbjct: 17  VAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAEVAAQLLGGNAKGLVCDVSD 72

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           S+SV  A   V+S  G +++LV +A       P    ++S + + K+I I+  G+FL AQ
Sbjct: 73  SQSVEAAVAAVISAFGRIDILVNSA-GVALLAPA--EDVSEEDWDKTIDINLKGSFLMAQ 129

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
            V   M+  G G I+     A +  +      C
Sbjct: 130 AVGRHMIAAGGGKIVNLASQAGVVALERHVAYC 162

Length = 255

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.1 bits (143), Expect = 7e-11
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           + AI G    +GR++A +FA  G  + I+ RD     + A+ +  E      +++ D +D
Sbjct: 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEH----LSVQADITD 326

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +V  AF  + +  G ++VLV NA     ++P+   E S + F +   ++  GAF CA+
Sbjct: 327 EAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPS--LEQSAEDFTRVYDVNLSGAFACAR 384

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
                M     G I+  G  ASL  +   +  C
Sbjct: 385 AAARLM--SQGGVIVNLGSIASLLALPPRNAYC 415

Length = 520

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 58.5 bits (142), Expect = 7e-11
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 7/148 (4%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS-QVFAIRIDCSD 73
             I G    +GR++AR+FA  GY VA+ AR   RL     E+     S +V    +D +D
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEI--LDVTD 58

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               +    E    LG +++++ NA      + T+  ++SF +F+++I  + LGA    +
Sbjct: 59  EERNQLVIAELEAELGGLDLVIINA---GVGKGTSLGDLSFKAFRETIDTNLLGAAAILE 115

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAG 160
             L     +G+G ++     A+L G+ G
Sbjct: 116 AALPQFRAKGRGHLVLISSVAALRGLPG 143

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 58.5 bits (142), Expect = 7e-11
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRID 70
           +A + G    +G++IA + A  G  V +  R   +    A+E+  E K+   +  A++ D
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYR--SKEDA-AEEVVEEIKAVGGKAIAVQAD 61

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
            S    V   F+  +   G +++LV NA  Q       +  E++ + + K I ++  G F
Sbjct: 62  VSKEEDVVALFQSAIKEFGTLDILVNNAGLQ----GDASSHEMTLEDWNKVIDVNLTGQF 117

Query: 129 LCAQQVLSGMVE-RGKGTIIF 148
           LCA++ +    + + KG II 
Sbjct: 118 LCAREAIKRFRKSKIKGKIIN 138

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 58.4 bits (142), Expect = 7e-11
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
             + G    +G ++AR  A  G  VA + R+  +L     ++ R         ++D +DS
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGY-PFATYKLDVADS 59

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            +V E  + +    G ++VLV N    +         +S + +Q + A+++ G F  +Q 
Sbjct: 60  AAVDEVVQRLEREYGPIDVLV-NVAGILRLGAI--DSLSDEDWQATFAVNTFGVFNVSQA 116

Query: 134 VLSGMVERGKGTIIFTGCSAS 154
           V   M  R  G I+  G +A+
Sbjct: 117 VSPRMKRRRSGAIVTVGSNAA 137

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 58.3 bits (141), Expect = 8e-11
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 26/168 (15%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G + AR  A EG  VAI AR + RL   ADE+   E  +   + +D +D
Sbjct: 5   VALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADEL-EAEGGKALVLELDVTD 63

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
            + V  A E  V +LG +++LV NA      PV    T         + + I  + LG  
Sbjct: 64  EQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTT-------DWTRMIDTNLLGLM 116

Query: 129 LCAQQVLSGMVERGKGTII-------------FTGCSASLNGIAGFSE 163
                 L   + R KGTI+                 +A+  G+  FSE
Sbjct: 117 YTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSE 164

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +GR+ A K A  G TV ++AR+   L     EI R +     A   D +DS +
Sbjct: 376 ITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI-RAKGGTAHAYTCDLTDSAA 434

Query: 77  VREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSF---QKSIAISSLGAFLCAQ 132
           V    + +L+  G V+ LV NA + +        E S D F   ++++A++  GA     
Sbjct: 435 VDHTVKDILAEHGHVDYLVNNAGRSIR----RSVENSTDRFHDYERTMAVNYFGAVRLIL 490

Query: 133 QVLSGMVERGKGTII 147
            +L  M ER  G ++
Sbjct: 491 GLLPHMRERRFGHVV 505

Length = 657

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G +IA++ A EG  V +   D     + A+  A +   +   ++ D + 
Sbjct: 3   VALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAE--AAQGGPRALGVQCDVTS 60

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V+ AFE  VL  G ++++V NA   ++   +   E S + + +S+ I+  G FL ++
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNA--GIAT-SSPIAETSLEDWNRSMDINLTGHFLVSR 117

Query: 133 QVLSGMVERGK-GTIIFTGCSASLNGIA 159
           +    M  +G  G I+F     S N +A
Sbjct: 118 EAFRIMKSQGIGGNIVFNA---SKNAVA 142

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 57.5 bits (139), Expect = 1e-10
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 6/137 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G ++AR     G  V   AR + ++   A E        +F  + D S+
Sbjct: 8   VALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDLSN 67

Query: 74  SRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              +   F  + +    V+V + NA      +P        + +++   ++ L   +C +
Sbjct: 68  EEQILSMFSAIRTQHQGVDVCINNAGLA---RPEPLLSGKTEGWKEMFDVNVLALSICTR 124

Query: 133 QVLSGMVERG--KGTII 147
           +    M ER    G II
Sbjct: 125 EAYQSMKERNVDDGHII 141

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 18/156 (11%)

Query: 12  RGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAI 67
            G  A+V G    LG  IA      G  V + AR    L    +E A   ++       I
Sbjct: 11  SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEEL----EEAAAHLEALGIDALWI 66

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSL 125
             D +D   +    E  L   G V++LV NA    +W  P    +   +++ K + ++  
Sbjct: 67  AADVADEADIERLAEETLERFGHVDILVNNA--GATWGAPA--EDHPVEAWDKVMNLNVR 122

Query: 126 GAFLCAQQVLS-GMVERGKGTIIFTGCSASLNGIAG 160
           G FL +Q V    M+ RG G II     AS+ G+ G
Sbjct: 123 GLFLLSQAVAKRSMIPRGYGRIINV---ASVAGLGG 155

Length = 259

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 7/146 (4%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFE 82
           +G+  AR+ A  G  V I  R+  +    A EI +E   ++V  I++D S   SVR+  E
Sbjct: 13  IGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLSSLASVRQFAE 72

Query: 83  GVLSLGF-VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER 141
             L+    +++L+ NA   +   P   T+   D F+   A++ LG FL    +L  +   
Sbjct: 73  EFLARFPRLDILINNA--GIMAPPRRLTK---DGFELQFAVNYLGHFLLTNLLLPVLKAS 127

Query: 142 GKGTIIFTGCSASLNGIAGFSELCKN 167
               I+     A   G   F++L   
Sbjct: 128 APSRIVNVSSIAHRAGPIDFNDLDLE 153

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.4 bits (137), Expect = 4e-10
 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 4/140 (2%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           LGR+IA + A  G  V +  R     +    E       +  A++ D +D  ++  A   
Sbjct: 18  LGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAA 77

Query: 84  VLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
            +   G +++LV NA      +P    ++S D + + I ++  G F   + V+  M ++ 
Sbjct: 78  AVERFGRIDILVNNA-GIFEDKP--LADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR 134

Query: 143 KGTIIFTGCSASLNGIAGFS 162
            G I+     A L G  G S
Sbjct: 135 GGRIVNISSVAGLPGWPGRS 154

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE---EKSQVFAIRID 70
           +A + G    +GR+IA++ A +G +V +   +       A+E+  E      +  A++ D
Sbjct: 5   VALVTGASRGIGRAIAKRLARDGASVVV---NYASSKAAAEEVVAEIEAAGGKAIAVQAD 61

Query: 71  CSDSRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            SD   V   F+    + G V++LV NA   +  +P    E S + F +   +++ GAF 
Sbjct: 62  VSDPSQVARLFDAAEKAFGGVDILVNNA-GVMLKKP--IAETSEEEFDRMFTVNTKGAFF 118

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             Q+    +  R  G II    S +      + 
Sbjct: 119 VLQEAAKRL--RDGGRIINISSSLTAAYTPNYG 149

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 6e-10
 Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 2/135 (1%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G++ A   A EG +V +   +     R A +I   +     A+++D SD
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIV-ADGGTAIAVQVDVSD 66

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             S +   +  +S  G ++ LV NA      +      + +D ++K ++++  GA +C +
Sbjct: 67  PDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTR 126

Query: 133 QVLSGMVERGKGTII 147
            V   M +RG G I+
Sbjct: 127 AVYKHMAKRGGGAIV 141

Length = 250

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 6e-10
 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G    LG + A   A  G TVA            A  +      +  AI  D +D
Sbjct: 9   RALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL-EAAGGRAHAIAADLAD 67

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             SV+  F     +LG ++ LV NA    S    + TE+  D++   + ++  G FL  +
Sbjct: 68  PASVQRFFDAAAAALGGLDGLVNNAGITNS---KSATELDIDTWDAVMNVNVRGTFLMLR 124

Query: 133 QVLSGMVERGKGTII 147
             L  + + G+G I+
Sbjct: 125 AALPHLRDSGRGRIV 139

Length = 250

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 55.4 bits (134), Expect = 8e-10
 Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 16  AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFA-IRIDCSDS 74
            I G G  +G ++ +     G  V     D   L+   + + +E KS+  + + +D +D 
Sbjct: 8   LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ 67

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAY-QPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            S+ E         G ++  V  AY +   +    F ++S D F +++++    +FL +Q
Sbjct: 68  ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYG-KKFFDVSLDDFNENLSLHLGSSFLFSQ 126

Query: 133 QVLSGMVERGKGTII 147
           Q      ++G G ++
Sbjct: 127 QFAKYFKKQGGGNLV 141

Length = 256

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 55.5 bits (134), Expect = 9e-10
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +G +IAR  A  G  V +           A ++A +    V  +  D +  
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGA-EAAAKVAGDAGGSVIYLPADVTKE 62

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             + +      +  G +++LV NA  Q V+  P    E   + + + IA+    AF   +
Sbjct: 63  DEIADMIAAAAAEFGGLDILVNNAGIQHVA--PIE--EFPPEDWDRIIAVMLTSAFHTIR 118

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
             L  M ++G G II     AS +G+   
Sbjct: 119 AALPHMKKQGWGRIINI---ASAHGLVAS 144

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +G ++A  F   G  V     D   L         +E        +D SD
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVI--GFDQAFL--------TQEDYPFATFVLDVSD 59

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           + +V +  + +L+  G ++VLV NA   +    T    +S + +Q++ A+++ GAF   +
Sbjct: 60  AAAVAQVCQRLLAETGPLDVLV-NAAGILRMGAT--DSLSDEDWQQTFAVNAGGAFNLFR 116

Query: 133 QVLSGMVERGKGTIIFTGCSA 153
            V+     +  G I+  G +A
Sbjct: 117 AVMPQFRRQRSGAIVTVGSNA 137

Length = 252

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 12/131 (9%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           + G    +GR+ A   A  G  V   AR+   L R A E   E       +R+D  D  +
Sbjct: 14  VTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCE------PLRLDVGDDAA 67

Query: 77  VREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLS 136
           +R A     + G  + LV  A         + T   FD   + +A+++ GA L A+ V  
Sbjct: 68  IRAALA---AAGAFDGLVNCAGIASLESALDMTAEGFD---RVMAVNARGAALVARHVAR 121

Query: 137 GMVERGKGTII 147
            M+  G+G  I
Sbjct: 122 AMIAAGRGGSI 132

Length = 245

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 10/153 (6%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +GR+IA + A +G+ + +   +L   ++   +   E      A+  D +D 
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDK 64

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             V    +  +   G  +V+V NA   P+    T    I+ +  +K  A++  G     Q
Sbjct: 65  DDVEALIDQAVEKFGSFDVMVNNAGIAPI----TPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 133 QVLSGMVERG-KGTIIFTGCSASLNGIAGFSEL 164
                  + G  G II     +S+ G+ GF  L
Sbjct: 121 AAARQFKKLGHGGKIINA---SSIAGVQGFPNL 150

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 14/146 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR  A +GY V++  R+   L+             V A+  D  D
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAA-----LSASGGDVEAVPYDARD 56

Query: 74  SRSVREAFEGVLSLGF--VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
               R A    L   F  ++VLV+NA   +  +PT   E S    +   +I+ +      
Sbjct: 57  PEDAR-ALVDALRDRFGRIDVLVHNA--GIG-RPTTLREGSDAELEAHFSINVIAPAELT 112

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNG 157
           + +L  + E G G ++F     SL+G
Sbjct: 113 RALLPALREAGSGRVVFL---NSLSG 135

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 52.5 bits (126), Expect = 9e-09
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCS 72
           +A I G    +G++ A   A EG  V  LA D+   +S   D+I +    +  A  +D S
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYV--LAVDIAEAVSETVDKI-KSNGGKAKAYHVDIS 64

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D + V++    +    G V+VL  NA   V        E   D F K +A+   G FL  
Sbjct: 65  DEQQVKDFASEIKEQFGRVDVLFNNA--GVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMT 122

Query: 132 QQVLSGMVERGKGTII----FTGCSASLN 156
           + +L  M+E+G G+II    F+G +A L 
Sbjct: 123 KMLLPLMMEQG-GSIINTSSFSGQAADLY 150

Length = 272

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRID 70
             +A +      +G++ A   A +G+ + I    D       A+E+ R    +    ++D
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV-RSHGVRAEIRQLD 60

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            SD     +A + ++  LG ++VLV NA          F ++ FD ++K   +   GAFL
Sbjct: 61  LSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK---APFLDMDFDEWRKIFTVDVDGAFL 117

Query: 130 CAQQVLSGMVERGKG 144
           C+Q     MV++G+G
Sbjct: 118 CSQIAARHMVKQGQG 132

Length = 256

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 26/168 (15%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRID 70
           +A I G    LG ++AR  A  G  VA L R+  +     D++A+E  +   +  A+  D
Sbjct: 7   VAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKG----DKVAKEITALGGRAIALAAD 62

Query: 71  CSDSRSVREAFEG-VLSLGFVEVLVYNA-------------YQPVSWQPTNFTEISFDSF 116
             D  S+  A E  V   G V++L+  A             Y+P + Q  NF ++  + +
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQ--NFFDLDEEGW 120

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL 164
           +    ++  G+FL +Q     M+E+  G+II     +S+N  +  +++
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINI---SSMNAFSPLTKV 165

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 7/141 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  + G     G  I R+F  +G+ V    R   RL    DE+       ++  ++D  +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDVRN 57

Query: 74  SRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             ++ E    +      ++VLV NA   +  +P +  + S + ++  I  ++ G     +
Sbjct: 58  RAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAH--KASVEDWETMIDTNNKGLVYMTR 115

Query: 133 QVLSGMVERGKGTIIFTGCSA 153
            VL GMVER  G II  G +A
Sbjct: 116 AVLPGMVERNHGHIINIGSTA 136

Length = 248

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 12  RGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRID 70
            G  A+V G G  +GR+  +  A  G  V  ++R    L    D + RE    +  + +D
Sbjct: 6   AGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADL----DSLVRECPG-IEPVCVD 60

Query: 71  CSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
            SD  +  EA   V   G V++LV NA      QP  F E++ ++F +S  ++       
Sbjct: 61  LSDWDATEEALGSV---GPVDLLVNNA-AVAILQP--FLEVTKEAFDRSFDVNVRAVIHV 114

Query: 131 AQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELC 165
           +Q V  GM+ RG  G+I+     AS   +   +  C
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYC 150

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 51.0 bits (122), Expect = 3e-08
 Identities = 34/150 (22%), Positives = 57/150 (38%), Gaps = 7/150 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           + AI G    LGR+ A   A  G  VA++ R    LS+    +       +    ID  D
Sbjct: 9   VVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVP---ADALRIGGIDLVD 65

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            ++ R A + V    G ++ LV  A     W      +   D++ +   ++       ++
Sbjct: 66  PQAARRAVDEVNRQFGRLDALVNIA-GAFVWG--TIADGDADTWDRMYGVNVKTTLNASK 122

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             L  +   G G I+  G  A+L    G  
Sbjct: 123 AALPALTASGGGRIVNIGAGAALKAGPGMG 152

Length = 239

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           +A + G    LG + AR    EG  V +  +  + G+        A E         +D 
Sbjct: 7   VAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQ------AAAAELGDAARFFHLDV 60

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +D        +      G ++VLV NA              + + +++ + I+  G FL 
Sbjct: 61  TDEDGWTAVVDTAREAFGRLDVLVNNAGILT---GGTVETTTLEEWRRLLDINLTGVFLG 117

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            + V+  M E G G+II       L G    +
Sbjct: 118 TRAVIPPMKEAGGGSIINMSSIEGLVGDPALA 149

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.9 bits (122), Expect = 3e-08
 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 12/142 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ-VFAIRIDCS 72
           +A I G    +GR+IA  F  EG  VA+L          A+  A+E + + VF I+ D  
Sbjct: 9   VALITGGTRGIGRAIAEAFLREGAKVAVLYNS-------AENEAKELREKGVFTIKCDVG 61

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           +   V+++ E V    G V+VLV NA          F E   + + K I I+  GA    
Sbjct: 62  NRDQVKKSKEVVEKEFGRVDVLVNNAG---IMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118

Query: 132 QQVLSGMVERGKGTIIFTGCSA 153
            + L  +     G I+    +A
Sbjct: 119 YEFLPLLKLSKNGAIVNIASNA 140

Length = 255

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRI---D 70
           IA + G    +G +I ++ A +GY VA  A       R A+   +E+ +  F  R+   D
Sbjct: 2   IALVTGGMGGIGTAICQRLAKDGYRVA--ANCGPNEER-AEAWLQEQGALGFDFRVVEGD 58

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            S   S + A   V + LG ++VLV NA      +   F +++++ +   I  +    F 
Sbjct: 59  VSSFESCKAAVAKVEAELGPIDVLVNNAGIT---RDATFKKMTYEQWSAVIDTNLNSVFN 115

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             Q V+ GM ERG G II     +S+NG  G
Sbjct: 116 VTQPVIDGMRERGWGRIINI---SSVNGQKG 143

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 6e-08
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 11/134 (8%)

Query: 16  AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
           AI G    +G + AR  A  G  VAI   D       A E+       V    +D +D  
Sbjct: 9   AITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGL-----VVGGPLDVTDPA 63

Query: 76  SVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           S     + V + LG ++VLV NA   PV      F +      ++ + ++  G  L ++ 
Sbjct: 64  SFAAFLDAVEADLGPIDVLVNNAGVMPV----GPFLDEPDAVTRRILDVNVYGVILGSKL 119

Query: 134 VLSGMVERGKGTII 147
               MV RG+G ++
Sbjct: 120 AAPRMVPRGRGHVV 133

Length = 273

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 50.2 bits (120), Expect = 6e-08
 Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 6/137 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A I G    +G  IAR FA  G  + +L      + + ADE+      +  A+  D  D
Sbjct: 8   TALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADEL-CGRGHRCTAVVADVRD 65

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             SV  A +      G +++LV NA      +  +F ++S +     I I+  G +   +
Sbjct: 66  PASVAAAIKRAKEKEGRIDILVNNAG---VCRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122

Query: 133 QVLSGMVERGKGTIIFT 149
            VL  M+ R  G I+  
Sbjct: 123 AVLPEMIARKDGRIVMM 139

Length = 263

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 49.8 bits (119), Expect = 7e-08
 Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRFADEIAREEKSQ-VFAIRID 70
           +A I G    +G + AR FA  G  V I  +  D G+       +A E     +  +  D
Sbjct: 6   VAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQ------AVAAELGDPDISFVHCD 59

Query: 71  CSDSRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            +    VR A +  ++  G ++++  NA   +     +  E S + F++ + ++  GAFL
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNA-GVLGAPCYSILETSLEEFERVLDVNVYGAFL 118

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             +     M+   KG+I+     AS+ G+ G
Sbjct: 119 GTKHAARVMIPAKKGSIVSV---ASVAGVVG 146

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 7e-08
 Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +A + G    +G +IAR+ A +G+ VA+  A           EI      +  A++ D +
Sbjct: 7   VAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI-EAAGGRAIAVQADVA 65

Query: 73  DSRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D+ +V   F+    + G ++VLV NA            +   + F ++IA +  GAF+  
Sbjct: 66  DAAAVTRLFDAAETAFGRIDVLVNNAG---VMPLGTIADFDLEDFDRTIATNLRGAFVVL 122

Query: 132 QQVLSGMVERGK 143
           ++    + + G+
Sbjct: 123 REAARHLGQGGR 134

Length = 245

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 49.8 bits (119), Expect = 7e-08
 Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 12/139 (8%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           + G    +GR++AR     G TV  L      L  + D +            +D +D+ +
Sbjct: 3   VTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLR--------LTPLDVADAAA 54

Query: 77  VREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           VRE    +L+  G ++ LV  A      +P     +S + ++++ A++  G F   Q V 
Sbjct: 55  VREVCSRLLAEHGPIDALVNCAG---VLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 136 SGMVERGKGTIIFTGCSAS 154
             M +R  G I+    +A+
Sbjct: 112 PHMKDRRTGAIVTVASNAA 130

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 10/153 (6%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA--REEKSQVFAIRID 70
           G   I G    LG ++AR  A EG    +L    G     A+ +A      ++V     D
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 71  CSDSRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            +D  ++      +  +LG ++ +V+NA   V        E++ + F++ +A    GA+ 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNA--GVL-DDGPLEELTPERFERVLAPKVTGAWN 117

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             +       +   G  +     A + G  G +
Sbjct: 118 LHELTR----DLDLGAFVLFSSVAGVLGSPGQA 146

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 9e-08
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G+++A++FA EG  V I  R   +L     EI +    QV  +++D  +   
Sbjct: 6   ITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP-GQVLTVQMDVRNPED 64

Query: 77  VREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFT----EISFDSFQKSIAISSLGAFLCA 131
           V++   +     G ++ L+ NA         NF     ++S + +   I I   G F C+
Sbjct: 65  VQKMVEQIDEKFGRIDALINNA-------AGNFICPAEDLSVNGWNSVIDIVLNGTFYCS 117

Query: 132 QQVLSGMVERG-KGTII 147
           Q V    +E+G KG II
Sbjct: 118 QAVGKYWIEKGIKGNII 134

Length = 252

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRID 70
           +A + G    +G++IA + A EGY +A+   +  R  + A+E A E ++   +  A++ +
Sbjct: 6   VALVTGSSRGIGKAIALRLAEEGYDIAV---NYARSRKAAEETAEEIEALGRKALAVKAN 62

Query: 71  CSDSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
             D   ++E F  +    G ++V V NA   V  +P    E+    +  ++ I++     
Sbjct: 63  VGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVL-RPA--MELEESHWDWTMNINAKALLF 119

Query: 130 CAQQVLSGMVERGKGTII 147
           CAQ+    M + G G II
Sbjct: 120 CAQEAAKLMEKVGGGKII 137

Length = 250

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 10/146 (6%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +GR++A + A  G  + + AR+  RL+  A E+A +   +   +  D SD+ +
Sbjct: 6   ITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELA-DHGGEALVVPTDVSDAEA 64

Query: 77  VREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEIS-FDSFQKSIAISSLGAFLCAQQV 134
                E  ++  G +++LV NA   ++   + F E++    F++ + ++ LGA  C    
Sbjct: 65  CERLIEAAVARFGGIDILVNNA--GITMW-SRFDELTDLSVFERVMRVNYLGAVYCTHAA 121

Query: 135 LSGMVERGKGTIIFTGCSASLNGIAG 160
           L  +    +G I+     +SL G+ G
Sbjct: 122 LPHLKAS-RGQIVVV---SSLAGLTG 143

Length = 263

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 12/150 (8%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQV-FAIRIDCS 72
           A I G    LGR+IAR+ A +G  V +    D   L  FA EI       V FA   D +
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 73  DSRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D    +    +   ++G + VLV NA            +I  D +++ +AI+    FL  
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSF---GAIEQIELDEWRRVMAINVESIFLGC 118

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           +  L  +      +I+      +++ +A F
Sbjct: 119 KHALPYLRASQPASIV------NISSVAAF 142

Length = 251

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 18/161 (11%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +GR+ A  FA  G  V + AR    L   A E+ RE   +  A+  D +D+  
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV-RELGGEAIAVVADVADAAQ 63

Query: 77  VREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           V  A +  V   G ++  V NA   V      F +++ + F++   ++ LG        L
Sbjct: 64  VERAADTAVERFGRIDTWVNNAGVAVF---GRFEDVTPEEFRRVFDVNYLGHVYGTLAAL 120

Query: 136 SGMVERGKGTIIFTGC-------------SASLNGIAGFSE 163
             +  RG G +I  G              SAS + + GF+E
Sbjct: 121 PHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTE 161

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 7/115 (6%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSR 75
           I G    +G+  AR+ A  G  V +  RD+ +    A EI R+    +V    +D +  +
Sbjct: 6   ITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASLK 65

Query: 76  SVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
           S+R      L+    ++VL+ NA   V   P + TE   D F+    ++ LG FL
Sbjct: 66  SIRAFAAEFLAEEDRLDVLINNA--GVMRCPYSKTE---DGFEMQFGVNHLGHFL 115

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +G ++A   A  G  V +  RD  +L+  A+ + + +     A+  D +D 
Sbjct: 13  ALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL-KGQGLSAHALAFDVTDH 71

Query: 75  RSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            +VR A +     +G +++LV NA        T   +   D+F++ +  +    F   Q 
Sbjct: 72  DAVRAAIDAFEAEIGPIDILVNNAGMQFR---TPLEDFPADAFERLLRTNISSVFYVGQA 128

Query: 134 VLSGMVERGKGTII 147
           V   M+ RG G II
Sbjct: 129 VARHMIARGAGKII 142

Length = 255

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 13/136 (9%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G  +A   A  G  + I      R      ++ R+E  +  A   + +  + 
Sbjct: 14  ITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKL-RQEGIKAHAAPFNVTHKQE 72

Query: 77  VREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           V  A E +   +G ++VL+ NA      P       FTE     +   IA++    FL +
Sbjct: 73  VEAAIEHIEKDIGPIDVLINNAGIQRRHP-------FTEFPEQEWNDVIAVNQTAVFLVS 125

Query: 132 QQVLSGMVERGKGTII 147
           Q V   MV+R  G II
Sbjct: 126 QAVARYMVKRQAGKII 141

Length = 254

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 5/135 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IA   A  G  + I +R+  +       I +E   +  A   D SD
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGV-EATAFTCDVSD 65

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +++ A E +    G +++LV NA      +     E     ++  I ++  G F  +Q
Sbjct: 66  EEAIKAAVEAIEEDFGKIDILVNNAGII---RRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122

Query: 133 QVLSGMVERGKGTII 147
            V   M+++G G II
Sbjct: 123 AVARHMIKQGHGKII 137

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 16  AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
            I G    LGR++A   A +G  +A++  +  +L     E      ++V     + +D  
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC-GALGTEVRGYAANVTDEE 67

Query: 76  SVREAFEGVLS-LGFVEVLVYNA--------YQPVSWQPTNFTEISFDSFQKSIAISSLG 126
            V   F  +    G +  L+ NA         +    + T  +++S + FQ  I ++  G
Sbjct: 68  DVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVT--SKMSLEQFQSVIDVNLTG 125

Query: 127 AFLCAQQVLSGMVERG-KGTII 147
            FLC ++  + M+E G KG II
Sbjct: 126 VFLCGREAAAKMIESGSKGVII 147

Length = 253

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 8/151 (5%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ---VFAIRIDC 71
             I G    LGR+IA + A +G  V +L     R    AD +A   ++       +  D 
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 72  SDSRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
            D  + R A + GV   G +++LV NA          F E+S + +   I ++  G F  
Sbjct: 69  RDFAATRAALDAGVEEFGRLDILVNNA---GIATDAAFAELSIEEWDDVIDVNLDGFFNV 125

Query: 131 AQQVLSGMVE-RGKGTIIFTGCSASLNGIAG 160
            Q  L  M+  R  G I+     A + G  G
Sbjct: 126 TQAALPPMIRARRGGRIVNIASVAGVRGNRG 156

Length = 249

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 48.3 bits (115), Expect = 3e-07
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 20/168 (11%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
             +A + G    +G +IAR+   EG  V + AR    L+    E+ RE   +      D 
Sbjct: 3   SEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKEL-REAGVEADGRTCDV 61

Query: 72  SDSRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
                +       V   G ++VLV NA +          E++ + +   +  +  G F  
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAGRSGG---GATAELADELWLDVVETNLTGVFRV 118

Query: 131 AQQVLS--GMVERGKGTII---FTG----------CSASLNGIAGFSE 163
            ++VL   GM+ERG G II    TG           SAS +G+ GF++
Sbjct: 119 TKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTK 166

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G G  +G +IA++   +G+ VAI+  +       AD++  ++  +  A++ D SD
Sbjct: 4   VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKL-SKDGGKAIAVKADVSD 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTE-ISFDSFQKSIAISSLGAFLCA 131
              V  A   V+   G + V+V NA       PT   E I+ + F K   I+  G     
Sbjct: 63  RDQVFAAVRQVVDTFGDLNVVVNNA----GVAPTTPIETITEEQFDKVYNINVGGVIWGI 118

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL 164
           Q       + G G  I    S +  G+ G  EL
Sbjct: 119 QAAQEAFKKLGHGGKIINATSQA--GVVGNPEL 149

Length = 256

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 48.4 bits (115), Expect = 3e-07
 Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 11/125 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCS 72
           +  I G    +G   AR FA  G  V +  R++ R S     I  E  K++V A+ +D +
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLA 62

Query: 73  DSRSVR---EAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
             RSV+   EAF+   S   + VLV NA   V   P   TE   D  + +  ++ LG F 
Sbjct: 63  SLRSVQRFAEAFKAKNS--PLHVLVCNA--AVFALPWTLTE---DGLETTFQVNHLGHFY 115

Query: 130 CAQQV 134
             Q +
Sbjct: 116 LVQLL 120

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 5/149 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ--VFAIRIDC 71
           I  + G    +GR  A  +A  G TV +L R+  +L + AD I  E   Q   F + +  
Sbjct: 6   IILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLT 65

Query: 72  SDSRSVRE-AFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
             S + ++ A    ++   ++ +++NA   +       +E +   +Q    ++    F+ 
Sbjct: 66  CTSENCQQLAQRIAVNYPRLDGVLHNA--GLLGDVCPLSEQNPQVWQDVXQVNVNATFML 123

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIA 159
            Q +L  +++   G+++FT  S    G A
Sbjct: 124 TQALLPLLLKSDAGSLVFTSSSVGRQGRA 152

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 48.0 bits (114), Expect = 4e-07
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 9/154 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A I G    +GR+ A+ +  EG  VAI   +L      A EI         AI +D +D
Sbjct: 5   TALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG----PAACAISLDVTD 60

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             S+      ++   G +++LV NA     +      +I+ +S+ +  AI+  G     Q
Sbjct: 61  QASIDRCVAALVDRWGSIDILVNNA---ALFDLAPIVDITRESYDRLFAINVSGTLFMMQ 117

Query: 133 QVLSGMVERGK-GTIIFTGCSASLNGIAGFSELC 165
            V   M+ +G+ G II     A   G A     C
Sbjct: 118 AVARAMIAQGRGGKIINMASQAGRRGEALVGVYC 151

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 3/132 (2%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           + G    +G + A +FA  G TV  +AR    L   AD I R       A+  D SD  +
Sbjct: 45  LTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDA 103

Query: 77  VREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           V      V   +G V++L+ NA + +  +P   +   +   ++++ ++        + + 
Sbjct: 104 VDALVADVEKRIGGVDILINNAGRSIR-RPLAESLDRWHDVERTMVLNYYAPLRLIRGLA 162

Query: 136 SGMVERGKGTII 147
            GM+ERG G II
Sbjct: 163 PGMLERGDGHII 174

Length = 293

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 26/161 (16%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFA------- 66
           +A I G    +GR++A  FA EG  +AI+  D         E A E K +V         
Sbjct: 48  VALITGGDSGIGRAVAVLFAKEGADIAIVYLD-------EHEDANETKQRVEKEGVKCLL 100

Query: 67  IRIDCSDSRSVREAFE-GVLSLGFVEVLVYN-AYQPVSWQPTN-FTEISFDSFQKSIAIS 123
           I  D SD    ++A E  V  LG +++LV N A+Q     P     +I+ +   K+   +
Sbjct: 101 IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQ----YPQQSLEDITAEQLDKTFKTN 156

Query: 124 SLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL 164
               F   +  L  + ++G   II TG   S+ G  G   L
Sbjct: 157 IYSYFHMTKAALPHL-KQG-SAIINTG---SITGYEGNETL 192

Length = 290

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 10/148 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  +G + AR+ A EG TV +   D       ADE+          +  D +D
Sbjct: 9   VAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDVTD 62

Query: 74  SRSVREAFEGVLSL-GFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
             +V   F+      G V++   NA   P   +  +      D++Q+   ++    +LC 
Sbjct: 63  EDAVNALFDTAAETYGSVDIAFNNAGISPP--EDDSILNTGLDAWQRVQDVNLTSVYLCC 120

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIA 159
           +  L  MV +GKG+II T    ++ G A
Sbjct: 121 KAALPHMVRQGKGSIINTASFVAVMGSA 148

Length = 255

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 47.3 bits (113), Expect = 7e-07
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 19/139 (13%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G++ AR+ A +GYTV   AR + ++   A          V  + +D +D
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------LGVHPLSLDVTD 57

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
             S++ A + +++  G ++VLV NA    Y  +        ++  D  ++   ++  GA 
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIE-------DVPIDEARRQFEVNLFGAA 110

Query: 129 LCAQQVLSGMVERGKGTII 147
              Q VL  M  +  G II
Sbjct: 111 RLTQLVLPHMRAQRSGRII 129

Length = 273

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 7/136 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCS 72
           + A  G G  +G + AR+   EG  V I      RL   ADE+A E    +V A+  D +
Sbjct: 22  VTAAAGTG--IGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVT 79

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
               V    +  +  LG ++VLV NA        T   +++ D + + + ++  G F   
Sbjct: 80  SEAQVDALIDAAVERLGRLDVLVNNAGLGGQ---TPVVDMTDDEWSRVLDVTLTGTFRAT 136

Query: 132 QQVLSGMVERGKGTII 147
           +  L  M  RG G +I
Sbjct: 137 RAALRYMRARGHGGVI 152

Length = 262

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 46.8 bits (111), Expect = 8e-07
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 8/146 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC-S 72
           +A + G    +G++IA   A  G +V I           A  I ++   Q   +  +  S
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAI-QQAGGQAIGLECNVTS 59

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSW-QPTNF-TEISFDSFQKSIAISSLGAFLC 130
           +          V   G + +LV NA        P  F   ++ + F+ +  ++   AF  
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNA----GGGGPKPFDMPMTEEDFEWAFKLNLFSAFRL 115

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLN 156
           +Q     M + G G I+     +S N
Sbjct: 116 SQLCAPHMQKAGGGAILNISSMSSEN 141

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 9e-07
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 9/138 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  I G    LGR++A +F  E   V I  R     +    E  ++   +  A++ D + 
Sbjct: 9   VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV 68

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
              V    +  V   G ++V++ NA     V   P+   E+S + + K I  +  GAFL 
Sbjct: 69  ESDVVNLIQTAVKEFGTLDVMINNAGIENAV---PS--HEMSLEDWNKVINTNLTGAFLG 123

Query: 131 AQQVLSGMVERG-KGTII 147
           +++ +   VE   KG II
Sbjct: 124 SREAIKYFVEHDIKGNII 141

Length = 261

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 7/146 (4%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDC 71
            IA + G    +GR+ A   A EGYTVA+   ++L       + I +    + F ++ D 
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADI 60

Query: 72  SDSRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           SD   V   F  +      +  LV NA   + +       ++ +   + ++ +  G FLC
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNA--GILFTQCTVENLTAERINRVLSTNVTGYFLC 118

Query: 131 AQQVLSGMVER--GKGTIIFTGCSAS 154
            ++ +  M  +  G G  I    SA+
Sbjct: 119 CREAVKRMALKHGGSGGAIVNVSSAA 144

Length = 247

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 13/152 (8%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRID 70
           R +A + G    +G  IAR  A  G+ +AI    D   L+    E+ R    +V     D
Sbjct: 2   RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQEL-RALGVEVIFFPAD 60

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
            +D  +     +   +  G ++ LV NA          +  +++ +SF + +AI+  G F
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKV--RGDLLDLTPESFDRVLAINLRGPF 118

Query: 129 LCAQQVLSGMVERGK------GTIIF-TGCSA 153
              Q V   M+ + +       +I+F +  +A
Sbjct: 119 FLTQAVAKRMLAQPEPEELPHRSIVFVSSVNA 150

Length = 256

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 13/138 (9%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G ++ARKF   G TV I  R   RL+    E+       +  I +D  D+ S
Sbjct: 10  ITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL-----PNIHTIVLDVGDAES 64

Query: 77  VREAFEGVLSLG-FVEVLVYNA-YQPVSWQPTNFT--EISFDSFQKSIAISSLGAFLCAQ 132
           V    E +LS    +++L+ NA  Q    +P +        D     I  + +G     +
Sbjct: 65  VEALAEALLSEYPNLDILINNAGIQ----RPIDLRDPASDLDKADTEIDTNLIGPIRLIK 120

Query: 133 QVLSGMVERGKGTIIFTG 150
             L  + ++ + TI+   
Sbjct: 121 AFLPHLKKQPEATIVNVS 138

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 21/163 (12%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-LSRFA----------DEIAREEKS 62
           +A I G     GR+ A + A EG    I+A DL   LS +           DE AR  ++
Sbjct: 5   VAFITGAARGQGRAHAVRLAAEG--ADIIAIDLCAPLSDYPTYPLATREDLDETARLVEA 62

Query: 63  Q---VFAIRIDCSDSRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQK 118
               V A + D  D   VR   E GV   G ++V+V NA   +S+  +   E+S + +  
Sbjct: 63  LGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANA-GVLSYGRSW--ELSEEQWDT 119

Query: 119 SIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAG 160
            + I+  G +   + V+  M+ERG  G+II T   A L  + G
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPG 162

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 14/147 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  +GR++  +F  EG  VA+L R   +       + +     V  +  D + 
Sbjct: 8   VALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQRFGDHVLVVEGDVTS 63

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNA-----YQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
               + A  + V + G ++  V NA        +   P    + +FD       ++  G 
Sbjct: 64  YADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEI---FNVNVKGY 120

Query: 128 FLCAQQVLSGMVERGKGTIIFTGCSAS 154
            L A+  L  +   G G++IFT  ++S
Sbjct: 121 LLGAKAALPALKASG-GSMIFTLSNSS 146

Length = 263

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 7/148 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           IA + G    +G +IAR+  ++GY V          ++   E     + QV    +D +D
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD 63

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           +    EA   +    G V++LV NA   ++ + + F  +S   +   I  +    F   Q
Sbjct: 64  TEECAEALAEIEEEEGPVDILVNNA--GIT-RDSVFKRMSHQEWNDVINTNLNSVFNVTQ 120

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAG 160
            + + M E+G G II     +S+NG+ G
Sbjct: 121 PLFAAMCEQGYGRIINI---SSVNGLKG 145

Length = 245

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 19/138 (13%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
             + G G  +GR  A  FA EG  V     D     R A+ I R   +   A R+D SD+
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI-RAAGAVAHAYRVDVSDA 376

Query: 75  RSVREAF-EGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG------ 126
            ++ EAF E V +  G  +++V NA   ++     F + S + + + + ++  G      
Sbjct: 377 DAM-EAFAEWVRAEHGVPDIVVNNAGIGMA---GGFLDTSAEDWDRVLDVNLWGVIHGCR 432

Query: 127 AFLCAQQVLSGMVERGKG 144
            F   +Q    MVERG G
Sbjct: 433 LF--GRQ----MVERGTG 444

Length = 582

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 14/141 (9%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAIL----ARDLGRLSRFADEIAREEKSQVFAIRID 70
           A I G    +GR++A  FA EG  VAI       D    ++   ++  EE  +   I  D
Sbjct: 29  ALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETK---KLIEEEGRKCLLIPGD 85

Query: 71  CSDSRSVREAFEGVL-SLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
             D    R+  + V+   G +++LV NA YQ       +  +I+ +  +K+   +    F
Sbjct: 86  LGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQ---ESIEDITTEQLEKTFRTNIFSMF 142

Query: 129 LCAQQVLSGMVERGKGTIIFT 149
              +  L  + ++G  +II T
Sbjct: 143 YLTKAALPHL-KKG-SSIINT 161

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 25/137 (18%), Positives = 51/137 (37%), Gaps = 7/137 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI--AREEKSQVFAIRIDC 71
           +A I G    +G   A  FA  G  +A+  RD  RL         A   + ++  +  D 
Sbjct: 5   VAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADL 64

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           ++           L+  G +++LV NA            +   + + K + ++       
Sbjct: 65  TEEEGQDRIISTTLAKFGRLDILVNNAGILA---KGGGEDQDIEEYDKVMNLNLRAVIYL 121

Query: 131 AQQVLSGMVERGKGTII 147
            +  +  +++  KG I+
Sbjct: 122 TKLAVPHLIKT-KGEIV 137

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 44.9 bits (106), Expect = 5e-06
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 6/151 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G    +G+ IA + A  G  VAI   +    +  ADEI  +   +   + +D ++
Sbjct: 9   TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEI-NKAGGKAIGVAMDVTN 67

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +V    + V    G V++LV NA   +     N+   SF  ++K  AI   GAFL  +
Sbjct: 68  EDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENY---SFADWKKMQAIHVDGAFLTTK 124

Query: 133 QVLSGMV-ERGKGTIIFTGCSASLNGIAGFS 162
             L  M  +   G +I+ G   S       S
Sbjct: 125 AALKHMYKDDRGGVVIYMGSVHSHEASPLKS 155

Length = 262

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 10/151 (6%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRID 70
           R +A + G    +GR+IA + A  G+ +AI    D  + +    E+    +  ++  + D
Sbjct: 1   RPVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIY-FQAD 59

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
             +        +      G ++ LV NA   V     +  +++ DSF + IAI+  G F 
Sbjct: 60  IGELSDHEALLDQAWEDFGRLDCLVNNAGIAVR-PRGDLLDLTEDSFDRLIAINLRGPFF 118

Query: 130 CAQQVLSGMVERGK------GTIIFTGCSAS 154
             Q V   MVE+         +IIF     +
Sbjct: 119 LTQAVARRMVEQPDRFDGPHRSIIFVTSINA 149

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 6e-06
 Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 3/126 (2%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +G  +AR  A  G  V +L+R+   L +  ++I  E    V  I  D +    +    + 
Sbjct: 20  IGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKE 79

Query: 84  VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK 143
           + ++G  ++  ++   P   +P  F E+S + ++ ++ +    A    + ++  M  +G 
Sbjct: 80  LKNIGEPDIFFFSTGGP---KPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGF 136

Query: 144 GTIIFT 149
           G II++
Sbjct: 137 GRIIYS 142

Length = 263

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 6e-06
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 17 IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA 57
          I+G   ++ R+ AR++A  G  + + ARD+ RL R AD++ 
Sbjct: 6  IIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLR 46

Length = 243

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 44.4 bits (105), Expect = 7e-06
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS-QVFAIRIDCS 72
            A I G    +G +IAR+F   G  V I+ARD   L++  DE+A E    +V  +  D S
Sbjct: 11  TALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVS 70

Query: 73  DSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D    R   + V      + +LV NA   +     ++TE   D ++     +   AF  +
Sbjct: 71  DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTE---DEWRGIFETNLFSAFELS 127

Query: 132 QQVLSGMVERGKGTIIFTGCSASL 155
           +     + +     I+  G  + L
Sbjct: 128 RYAHPLLKQHASSAIVNIGSVSGL 151

Length = 257

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDC 71
            +A + G G  +G+ IA   A  G  VA+   R    L+  A+ I    +  +  I  D 
Sbjct: 9   QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQ-IAADV 67

Query: 72  SDSRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +    +R A       LG + + V NA    +  P    E+  + +Q  + I+  G FL 
Sbjct: 68  TSKADLRAAVARTEAELGALTLAV-NAAGIANANPAE--EMEEEQWQTVMDINLTGVFLS 124

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGI 158
            Q     M+E G G+I+     AS++GI
Sbjct: 125 CQAEARAMLENGGGSIVNI---ASMSGI 149

Length = 254

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 10/151 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +A + G    +G  IAR  A  G  + +    D   +      +A +   +V     D S
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
              ++ +         G V++LV NA  Q V        +   + +   IA++    F  
Sbjct: 64  KPAAIEDMVAYAQRQFGGVDILVNNAGIQHV----APIEDFPTEKWDAIIALNLSAVFHT 119

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
            +  L  M ++G G II     AS++G+   
Sbjct: 120 TRLALPHMKKQGWGRIINI---ASVHGLVAS 147

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI-AREEKSQVFAIRIDCSD 73
           A + G    +G+  A + A +G  + ++AR+  +L   +D I ++  K+Q+  + +D S 
Sbjct: 56  ALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG 115

Query: 74  S-----RSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTN-FTEISFDSFQKSIAISSLGA 127
                 + ++E  EG L +G   VL+ N    VS+     F E+  +  +  I ++  G 
Sbjct: 116 DIDEGVKRIKETIEG-LDVG---VLINNV--GVSYPYARFFHEVDEELLKNLIKVNVEGT 169

Query: 128 FLCAQQVLSGMVERGKGTIIFTGCSASL 155
               Q VL GM++R KG II  G  A++
Sbjct: 170 TKVTQAVLPGMLKRKKGAIINIGSGAAI 197

Length = 320

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 8/141 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCS 72
           IA + G    +GR IA +    G TV I  R  L +L   A+EI      +   +R D S
Sbjct: 5   IALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEI-EARGGKCIPVRCDHS 63

Query: 73  DSRSVREAFEGVLSL--GFVEVLVYNAYQPV----SWQPTNFTEISFDSFQKSIAISSLG 126
           D   V   FE V     G +++LV NAY  V          F E     +     +    
Sbjct: 64  DDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVGLRA 123

Query: 127 AFLCAQQVLSGMVERGKGTII 147
            + C+      MV+ GKG I+
Sbjct: 124 HYACSVYAAPLMVKAGKGLIV 144

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 9/150 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI-RIDCS 72
           IA + G     G     + A +GY V    R+  +      +  +    Q   + ++D +
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTE-ISFDSFQKSIAISSLGAFLCA 131
           D  S+      +  +G +++LV NA          F E I  + ++K    +  GA    
Sbjct: 65  DQNSIHNFQLVLKEIGRIDLLVNNAGYANG----GFVEEIPVEEYRKQFETNVFGAISVT 120

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           Q VL  M ++  G II      S++G  GF
Sbjct: 121 QAVLPYMRKQKSGKIINIS---SISGRVGF 147

Length = 280

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 33/151 (21%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G + AR F  +G  V     D       +             +++D SD   
Sbjct: 10  ITGAASGIGLAQARAFLAQGAQV--YGVDKQDKPDLSGNFH--------FLQLDLSDD-- 57

Query: 77  VREAFEGVLSLGFVEVL-----VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           +   F+ V S   V++L     + + Y+P+        + S + +Q     +    FL  
Sbjct: 58  LEPLFDWVPS---VDILCNTAGILDDYKPL-------LDTSLEEWQHIFDTNLTSTFLLT 107

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +  L  M+ER  G II   CS     IA F 
Sbjct: 108 RAYLPQMLERKSGIII-NMCS-----IASFV 132

Length = 235

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 5/135 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           IA I G    +G +IA+ +A  G T+     +   + +      RE   +      D +D
Sbjct: 12  IALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDK-GLAAYRELGIEAHGYVCDVTD 70

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V+     +   +G +++LV NA      +     E+S + F++ I I     F+ ++
Sbjct: 71  EDGVQAMVSQIEKEVGVIDILVNNAG---IIKRIPMLEMSAEDFRQVIDIDLNAPFIVSK 127

Query: 133 QVLSGMVERGKGTII 147
            V+  M+++G G II
Sbjct: 128 AVIPSMIKKGHGKII 142

Length = 265

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 30/143 (20%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 6   SSGSSCRG-IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQV 64
              +S  G +  + G    +G  +AR+    G  +A++  +   L+  A E+  +++  V
Sbjct: 2   PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDR--V 59

Query: 65  FAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKS 119
             +  D +D  +++ A E  +   G ++V+V NA                ++  D+F++ 
Sbjct: 60  LTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGS-------VAQVDPDAFRRV 112

Query: 120 IAISSLGAFLCAQQVLSGMVERG 142
           I ++ LG F   +  L  ++ER 
Sbjct: 113 IDVNLLGVFHTVRATLPALIERR 135

Length = 296

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+  G+G N+ R + +K    G  V I +R+   L +   E+    +  V+A++ D SD 
Sbjct: 7   ASSRGIGFNVARELLKK----GARVVISSRNEENLEKALKELKEYGE--VYAVKADLSDK 60

Query: 75  RS----VREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG-AFL 129
                 V+EA+E    LG ++ LV+NA   V  +P    E  +  + ++  +  +   +L
Sbjct: 61  DDLKNLVKEAWEL---LGGIDALVWNAGN-VRCEPCMLHEAGYSDWLEAALLHLVAPGYL 116

Query: 130 CAQQVLSGMVERGKGTIIF 148
               + + + ++ KG +++
Sbjct: 117 TTLLIQAWLEKKMKGVLVY 135

Length = 259

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 10/139 (7%)

Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV 84
           G + A     +GYTV          + FAD   R+            S+ +   E  + V
Sbjct: 14  GPASAEALTEDGYTVV------CHDASFADAAERQAFESENPGTKALSEQKP-EELVDAV 66

Query: 85  LSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK 143
           L   G ++VLV N Y P    P +    S    +++    S+  F   Q  ++ M + G 
Sbjct: 67  LQAGGAIDVLVSNDYIPRPMNPID--GTSEADIRQAFEALSIFPFALLQAAIAQMKKAGG 124

Query: 144 GTIIFTGCSASLNGIAGFS 162
           G+IIF   +     +A  S
Sbjct: 125 GSIIFITSAVPKKPLAYNS 143

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 7/134 (5%)

Query: 16  AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
            I G    LGR+IA ++A EG+ +A+   +          + RE     F  R D  D  
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLL-REAGGDGFYQRCDVRDYS 62

Query: 76  SVREAFEGVLS--LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            +  A         G ++V+V NA   V+     F E+S + +   IAI+ +G     + 
Sbjct: 63  QL-TALAQACEEKWGGIDVIVNNA--GVA-SGGFFEELSLEDWDWQIAINLMGVVKGCKA 118

Query: 134 VLSGMVERGKGTII 147
            L     +  G I+
Sbjct: 119 FLPLFKRQKSGRIV 132

Length = 270

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 12/151 (7%)

Query: 17  IVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
           I G    LG + A+  A  G + V +  RD  +  R A      + S    + +D +   
Sbjct: 2   ITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYT-VMHLDLASLD 60

Query: 76  SVREAFEGVLSLGF-VEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           SVR+  +     G  ++VLV NA  Y P + +PT FT    D F+ S+  + LG FL ++
Sbjct: 61  SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPT-FTA---DGFELSVGTNHLGHFLLSR 116

Query: 133 QVLSGMVE---RGKGTIIFTGCSASLNGIAG 160
            +L  + +     K  II    + + N +AG
Sbjct: 117 LLLDDLKKSDYPSKRLIIVGSITGNTNTLAG 147

Length = 308

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
          R  A I G    +G +IAR+ A   +T+ +  R   RL   A E+            +D 
Sbjct: 3  RPTALITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAAELPGAT-----PFPVDL 56

Query: 72 SDSRSVREAFEGVLSLGFVEVLVYNA 97
          +D  ++  A E    LG ++VLV+NA
Sbjct: 57 TDPEAIAAAVE---QLGRLDVLVHNA 79

Length = 227

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 14/135 (10%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I GV    GR++A+     G+ V    R     + F          +  A  +D +D  +
Sbjct: 9   ITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHPDRALARLLDVTDFDA 64

Query: 77  VREAFEGVLS-LGFVEVLVYNA---YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           +        +  G ++VLV NA   ++          E      ++   ++  GA    +
Sbjct: 65  IDAVVADAEATFGPIDVLVNNAGYGHEGA------IEESPLAEMRRQFEVNVFGAVAMTK 118

Query: 133 QVLSGMVERGKGTII 147
            VL GM  R +G I+
Sbjct: 119 AVLPGMRARRRGHIV 133

Length = 277

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 6e-05
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 5/132 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    LG   A+  A  G  V + +R + RL     EI  E  +    + +D +D
Sbjct: 11  VALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA-AHVVSLDVTD 69

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            +S++ A        G +++LV N+   VS       +++   F      ++ GAF  AQ
Sbjct: 70  YQSIKAAVAHAETEAGTIDILVNNS--GVSTT-QKLVDVTPADFDFVFDTNTRGAFFVAQ 126

Query: 133 QVLSGMVERGKG 144
           +V   M+ R KG
Sbjct: 127 EVAKRMIARAKG 138

Length = 258

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query: 17 IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRID 70
          + G    LG  +A+ +A  G TV ++AR   +L +  D I      + FAIR D
Sbjct: 11 VTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFD 64

Length = 239

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 11/150 (7%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +GR+ A  FA EG+ V     +   L+  A E+        +   +D +D  +
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAG---NAWTGALDVTDRAA 62

Query: 77  VREAFE--GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQV 134
              A       + G ++VL  NA          F +I  ++  + I I+  G    A   
Sbjct: 63  WDAALADFAAATGGRLDVLFNNAGILRGGP---FEDIPLEAHDRVIDINVKGVLNGAHAA 119

Query: 135 LSGMVERGKGTIIFTGCSASLNGIAGFSEL 164
           L   ++   G  +    SAS   I G   L
Sbjct: 120 LP-YLKATPGARVINTSSAS--AIYGQPGL 146

Length = 260

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 17 IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS-QVFAIRIDCSDSR 75
          I G    LG  +AR+FA +G  +A+ AR   RL     E+       +V    +D +D  
Sbjct: 7  ITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHD 66

Query: 76 SVREAFE 82
           V E F 
Sbjct: 67 QVFEVFA 73

Length = 248

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCS 72
           IA + G    +G +IA+  A +G  V + +R L      AD I     K++  A  I   
Sbjct: 10  IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHI--G 67

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTN--FTEI---SFDSFQKSIAISSLG 126
           +   +   F  +    G +++LV NA         N  F  I      +FQK++ ++  G
Sbjct: 68  EMEQIDALFAHIRERHGRLDILVNNA-------AANPYFGHILDTDLGAFQKTVDVNIRG 120

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGI 158
            F  + +    M E+G G+I+     AS+NG+
Sbjct: 121 YFFMSVEAGKLMKEQGGGSIVNV---ASVNGV 149

Length = 252

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 13/135 (9%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G ++A++F   G TV I  R+  RL+      A+ E  ++     D +D  S
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVIICGRNEERLAE-----AKAENPEIHTEVCDVADRDS 64

Query: 77  VREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFT--EISFDSFQKSIAISSLGAFLCAQ 132
            RE  E +      + VL+ NA  Q    +  + T  E   D  ++ IA + L       
Sbjct: 65  RRELVEWLKKEYPNLNVLINNAGIQ----RNEDLTGAEDLLDDAEQEIATNLLAPIRLTA 120

Query: 133 QVLSGMVERGKGTII 147
            +L  ++ + + TII
Sbjct: 121 LLLPHLLRQPEATII 135

Length = 245

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%)

Query: 12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
            +A + G    +GR+ A K A  GY V   +R+  R               V  + +D 
Sbjct: 4  SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---------APIPGVELLELDV 54

Query: 72 SDSRSVREAFEGVLSL-GFVEVLVYNA 97
          +D  SV+ A + V++  G ++VLV NA
Sbjct: 55 TDDASVQAAVDEVIARAGRIDVLVNNA 81

Length = 270

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G     GR+        G  V   ARD   L+  A++       ++  + +D +D  +
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG----DRLLPLALDVTDRAA 63

Query: 77  VREAFE-GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           V  A E  V   G ++++V NA   +       TE      +  I  +  GA    Q VL
Sbjct: 64  VFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTE---SEARAQIDTNFFGALWVTQAVL 120

Query: 136 SGMVERGKGTIIFTGCSASLNGIAGF 161
             + E+  G II     +S+ GI+ F
Sbjct: 121 PYLREQRSGHIIQI---SSIGGISAF 143

Length = 275

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 17/143 (11%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G G   GR +A + A +G+ V    +   +++    E A      +   ++D +D+  
Sbjct: 7   ITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAE-AARRGLALRVEKLDLTDAID 65

Query: 77  VREAFEGVLSLGFVEVLVYNAYQ----PVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +A E       V+VL+ NA       V        +I  +  ++    +  G     Q
Sbjct: 66  RAQAAEWD-----VDVLLNNAGIGEAGAV-------VDIPVELVRELFETNVFGPLELTQ 113

Query: 133 QVLSGMVERGKGTIIFTGCSASL 155
             +  MV RGKG ++FT   A L
Sbjct: 114 GFVRKMVARGKGKVVFTSSMAGL 136

Length = 257

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           +A + G    +G SI R F   G  V I  L  DLG+     D +  E    V     D 
Sbjct: 20  VALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQ--NVCDSLGGEPN--VCFFHCDV 75

Query: 72  SDSRSVREAFE-GVLSLGFVEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFL 129
           +    V  A +  V   G ++++V NA   ++  P  +   +    F+K   ++  G FL
Sbjct: 76  TVEDDVSRAVDFTVDKFGTLDIMVNNA--GLTGPPCPDIRNVELSEFEKVFDVNVKGVFL 133

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             +     M+   KG+I+     AS  G  G
Sbjct: 134 GMKHAARIMIPLKKGSIVSLCSVASAIGGLG 164

Length = 280

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 10/146 (6%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G+++AR++A +G T+ ++AR    L  FA  + +  +  V+A   D  D+ +
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYA--ADVRDADA 64

Query: 77  VREAFEGVLS-LGFVEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCAQQV 134
           +  A    ++  G  +V++ NA   +S    T   E     F++ +  +  G     Q  
Sbjct: 65  LAAAAADFIAAHGLPDVVIANA--GISVGTLTEERE-DLAVFREVMDTNYFGMVATFQPF 121

Query: 135 LSGMVERGKGTIIFTGCSASLNGIAG 160
           ++ M    +GT++  G  AS+ G+ G
Sbjct: 122 IAPMRAARRGTLV--GI-ASVAGVRG 144

Length = 257

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ-VFAIRIDCSDSR 75
           I G    +G++ A   A  G TV ++ R+  R      EI  E  +Q +F   +D SD +
Sbjct: 6   ITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDPK 65

Query: 76  SVREAFEGVLSLGF-VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            V E  E     G  + VL+ NA   V     N  E++ D  +K+ A ++LG ++
Sbjct: 66  QVWEFVEEFKEEGKKLHVLINNAGCMV-----NKRELTEDGLEKNFATNTLGTYI 115

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCS 72
          +A + G    +G +        G +VAI  RD  RL+     +  +   +++ A R D  
Sbjct: 10 VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVL 69

Query: 73 DSRSVREAFEGVLS-LGFVEVLVYNAYQ 99
          D   V      V +  G V++LV NA Q
Sbjct: 70 DEADVAAFAAAVEARFGGVDMLVNNAGQ 97

Length = 265

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 7/136 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI-AREEKSQVFAIRIDCS 72
           +A + G    LG  IAR  A  G  V +  R+   L      + A    ++  A   D +
Sbjct: 13  VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALA--FDIA 70

Query: 73  DSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D  +V  AF  +    G +++LV N     +       E+   + +  +    +   L +
Sbjct: 71  DEEAVAAAFARIDAEHGRLDILVNNVG---ARDRRPLAELDDAAIRALLETDLVAPILLS 127

Query: 132 QQVLSGMVERGKGTII 147
           +     M  +G G II
Sbjct: 128 RLAAQRMKRQGYGRII 143

Length = 256

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +A I G     G + AR  A  G  + +       L R   E+ R + ++V  +R D S
Sbjct: 7  KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAEL-RAQGAEVLGVRTDVS 65

Query: 73 DSRSVREAFEGVL-SLGFVEVLVYNA 97
          D+  V    +  L   G V +L  NA
Sbjct: 66 DAAQVEALADAALERFGAVHLLFNNA 91

Length = 287

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 21/153 (13%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE------KSQVFAIRID 70
           I G G  LG + A + A EG   A L+  L  L+    E A+         ++V  I+ D
Sbjct: 8   ITGGGSGLGLATAVRLAKEG---AKLS--LVDLNEEGLEAAKAALLEIAPDAEVLLIKAD 62

Query: 71  CSDSRSVREAF--EGVLSLGFVEVLVYNAYQPVSWQPT-NFTEISFDSFQKSIAISSLGA 127
            SD   V EA+    V   G ++    NA        T +F     D F K ++I+  G 
Sbjct: 63  VSDEAQV-EAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGA---DEFDKVVSINLRGV 118

Query: 128 FLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           F   ++VL  M E+G G I+ T   AS+ GI G
Sbjct: 119 FYGLEKVLKVMREQGSGMIVNT---ASVGGIRG 148

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 40/150 (26%), Positives = 57/150 (38%), Gaps = 17/150 (11%)

Query: 17  IVGVGPNLGRSIARKFAHEG---YTVAILARDLGRLSRFADEIAREEKSQVFAI-RIDCS 72
           I G    +G  +A + A +    + V    RDL +  R   E A           ++D  
Sbjct: 5   ITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLW-EAAGALAGGTLETLQLDVC 63

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
           DS+SV  A E V     V+VLV NA      P+         +S D+      ++  G  
Sbjct: 64  DSKSVAAAVERVTE-RHVDVLVCNAGVGLLGPLE-------ALSEDAMASVFDVNVFGTV 115

Query: 129 LCAQQVLSGMVERGKGTIIFTGCSASLNGI 158
              Q  L  M  RG G I+ T     L G+
Sbjct: 116 RMLQAFLPDMKRRGSGRILVTSSVGGLQGL 145

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 14/139 (10%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSD 73
           A + G    +GR+IA   A EGY V +          R  DE+     S    ++ D SD
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNS-AVLVQADLSD 61

Query: 74  SRSVREAFEGVL-----SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
                 A   ++     + G  +VLV NA    ++ PT   + S D++ +   I+    +
Sbjct: 62  F----AACADLVAAAFRAFGRCDVLVNNA---SAFYPTPLGQGSEDAWAELFGINLKAPY 114

Query: 129 LCAQQVLSGMVERGKGTII 147
           L  Q     +     G+II
Sbjct: 115 LLIQAFARRLAGSRNGSII 133

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 14/147 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  LGR++  +F  EG  VA+L R   +++    E+  +    V  +  D   
Sbjct: 6   VALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVA----ELRADFGDAVVGVEGDVRS 61

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQ-PTNFTEISFD----SFQKSIAISSLGA 127
                 A    V   G ++  + NA     W   T+  +I  +    +F +   I+  G 
Sbjct: 62  LADNERAVARCVERFGKLDCFIGNA---GIWDYSTSLVDIPEEKLDEAFDELFHINVKGY 118

Query: 128 FLCAQQVLSGMVERGKGTIIFTGCSAS 154
            L A+  L  +    +G++IFT  +A 
Sbjct: 119 ILGAKAALPALY-ATEGSVIFTVSNAG 144

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 38.1 bits (88), Expect = 9e-04
 Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTV-AILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           IA + G    +G SI ++   +G+ V A    +  R  ++ ++  +       A   +  
Sbjct: 5   IAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLED-QKALGFDFIASEGNVG 63

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D  S + AF+ V + +G ++VLV NA      +   F +++ + +   I  +    F   
Sbjct: 64  DWDSTKAAFDKVKAEVGEIDVLVNNAGIT---RDVVFRKMTREDWTAVIDTNLTSLFNVT 120

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           +QV+ GMVERG G II     +S+NG  G
Sbjct: 121 KQVIDGMVERGWGRIINI---SSVNGQKG 146

Length = 246

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 18/144 (12%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRID 70
           +A + G    +GR+IA + A++G  VAI     GR  + ADE  RE +S   + F I  D
Sbjct: 8   VALVTGASRGIGRAIAMRLANDGALVAI---HYGRNKQAADETIREIESNGGKAFLIEAD 64

Query: 71  CSDSRSVREAFEGV-------LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAIS 123
            +    V++  E +       +    +++LV NA         N TE  FD     +A++
Sbjct: 65  LNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI---MAVN 121

Query: 124 SLGAFLCAQQVLSGMVERGKGTII 147
               F   QQ L  +  R +G +I
Sbjct: 122 IKAPFFLIQQTLPLL--RAEGRVI 143

Length = 254

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +GR+ A  FA EG  V +  RD          I RE   +   +  D + 
Sbjct: 9   VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI-REAGGEALFVACDVTR 67

Query: 74  SRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V+   E  ++  G ++    NA   +  +     E S   F   + ++  G +LC +
Sbjct: 68  DAEVKALVEQTIAAYGRLDYAFNNA--GIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMK 125

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             +  M+ +G G I+ T   A L      S
Sbjct: 126 YQIPLMLAQGGGAIVNTASVAGLGAAPKMS 155

Length = 253

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 8  GSSCRGIAAIV--GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVF 65
          G   +G  A+V  G GP +G+  A   A EG  V ++ RDL R  + AD +       V 
Sbjct: 23 GKDLKGKTAVVLGGTGP-VGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVG 81

Query: 66 AIRIDCSDSRSVREAFEGV 84
          A+      +R    A +G 
Sbjct: 82 AVETSDDAAR--AAAIKGA 98

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCS 72
           +A + G    LG   A   A +G  V +  R+L +    A  I      + V    +D +
Sbjct: 18  VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLT 77

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
              SVR A + + +    +++L+ NA   V + P   T    D F+     + LG F
Sbjct: 78  SLASVRAAADALRAAYPRIDLLINNA--GVMYTPKQTTA---DGFELQFGTNHLGHF 129

Length = 306

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 14/156 (8%)

Query: 17  IVGVGPNLGRSIARKFAHEGYT--VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           + G    +GR++A +    G    V +LAR    L    +E+      +V  ++ D SD+
Sbjct: 4   LTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEEL--RPGLRVTTVKADLSDA 61

Query: 75  RSVREAFEGVLSLGF-VEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC- 130
             V +  E +  L    ++L+ NA    PVS        I  D  QK   + +L + +C 
Sbjct: 62  AGVEQLLEAIRKLDGERDLLINNAGSLGPVS----KIEFIDLDELQKYFDL-NLTSPVCL 116

Query: 131 AQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELC 165
              +L    +RG K T++     A++N   G+   C
Sbjct: 117 TSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYC 152

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 11/148 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  + G    +GR +A + A EG  V ++ R          EI             D   
Sbjct: 6   VVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHE-VLAEI-LAAGDAAHVHTADLET 63

Query: 74  ----SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
                  VR A E     G V+VL+ N    + W    +     +  +  I  S      
Sbjct: 64  YAGAQGVVRAAVE---RFGRVDVLINNVGGTI-WAKP-YEHYEEEQIEAEIRRSLFPTLW 118

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNG 157
           C + VL  M+ER +G I+     A+   
Sbjct: 119 CCRAVLPHMLERQQGVIVNVSSIATRGI 146

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 34/159 (21%), Positives = 57/159 (35%), Gaps = 16/159 (10%)

Query: 13  GIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           G+ A+V G    LG +   +   +G  V IL          A          V     D 
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFVPV-----DV 56

Query: 72  SDSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNF---TEISFDSFQKSIAISSLGA 127
           +  + V+ A        G ++++V  A   V+ +  N       S + FQ+ I ++ +G 
Sbjct: 57  TSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGT 116

Query: 128 FLCAQQVLSGMVERG------KGTIIFTGCSASLNGIAG 160
           F   +     M +        +G II T   A+  G  G
Sbjct: 117 FNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIG 155

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 15/113 (13%)

Query: 21  GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA 80
           G NLG  IA+ FA  G  VA+ +R   ++     ++ ++   +   +  D  D  +V  A
Sbjct: 20  GINLG--IAQAFARAGANVAVASRSQEKVDAAVAQL-QQAGPEGLGVSADVRDYAAVEAA 76

Query: 81  FEGVLS-LGFVEVLVYNAYQPVSWQPTNF----TEISFDSFQKSIAISSLGAF 128
           F  +    G ++VLV  A         NF      +S + F+  + I  LG F
Sbjct: 77  FAQIADEFGPIDVLVSGA-------AGNFPAPAAGMSANGFKTVVDIDLLGTF 122

Length = 264

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 25/142 (17%)

Query: 12  RGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRID 70
           +   AIV G    +G+++  +   EG  V                      + V   ++D
Sbjct: 5   KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK------------EPSYNDVDYFKVD 52

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSL 125
            S+   V +  + V+S  G +++LV NA    Y  +         +  D + + I ++  
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIH-------AVEEDEWDRIINVNVN 105

Query: 126 GAFLCAQQVLSGMVERGKGTII 147
           G FL ++  +  M+++ KG II
Sbjct: 106 GIFLMSKYTIPYMLKQDKGVII 127

Length = 258

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 6/143 (4%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +G +I  + A  G  V   AR+   L     E  RE+  +V     D S  
Sbjct: 9   ALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEW-REKGFKVEGSVCDVSSR 67

Query: 75  RSVREAFEGVLSL--GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              +E  + V S   G + +LV NA   +  +  ++TE   + +   ++ +   A+  ++
Sbjct: 68  SERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTE---EDYSLIMSTNFEAAYHLSR 124

Query: 133 QVLSGMVERGKGTIIFTGCSASL 155
                +   G G I+F    A +
Sbjct: 125 LAHPLLKASGNGNIVFISSVAGV 147

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I      +GR+IA  FA EG  V  +A D+            E    +    +D +D
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANV--IATDINE----EKLKELERGPGITTRVLDVTD 57

Query: 74  SRSVREAFEGVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V    +     G ++VL   A +        +  +   D +  ++ ++    +L  +
Sbjct: 58  KEQVAALAKE---EGRIDVLFNCAGFVHHG----SILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 133 QVLSGMVERGKGTII 147
            VL  M+ R  G+II
Sbjct: 111 AVLPKMLARKDGSII 125

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           R +  I G    +G + A   A  GY V +        +    +  R +  +  A+  D 
Sbjct: 2   RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADV 61

Query: 72  SDSRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +D   V   FE V   LG ++ LV NA   +        ++      +  A + +G+FLC
Sbjct: 62  ADEADVLRLFEAVDRELGRLDALVNNA--GILEAQMRLEQMDAARLTRIFATNVVGSFLC 119

Query: 131 AQQVLSGMVER--GKGTII 147
           A++ +  M  R  G+G  I
Sbjct: 120 AREAVKRMSTRHGGRGGAI 138

Length = 248

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 13 GIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
          G  AIV G    +G ++AR     G  VAI+  D    +  A  +      +   I  D 
Sbjct: 6  GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG----ERARFIATDI 61

Query: 72 SDSRSVREAFEGVLS-LGFVEVLVYNA 97
          +D  ++  A   V++  G V++LV  A
Sbjct: 62 TDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 21/156 (13%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-------RLSRFADEIAREEKS---Q 63
           +  + G G  LGR+ A  FA  G  V +   DLG       + S  AD++  E K+   +
Sbjct: 7   VVLVTGAGGGLGRAYALAFAERGAKVVV--NDLGGDRKGSGKSSSAADKVVDEIKAAGGK 64

Query: 64  VFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIA 121
             A      D   + +    + + G V++LV NA   +  S     F ++S + +   + 
Sbjct: 65  AVANYDSVEDGEKIVKT--AIDAFGRVDILVNNAGILRDRS-----FAKMSEEDWDLVMR 117

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG 157
           +   G+F   +     M ++  G II T  +A L G
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYG 153

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           A I G G  +G+ IA  FA  G +V +   +    +   DEI ++   Q FA R D + 
Sbjct: 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI-QQLGGQAFACRCDITS 71

Query: 74 SRSVREAFEGVLS-LGFVEVLVYNA 97
           + +    +  LS LG V++LV NA
Sbjct: 72 EQELSALADFALSKLGKVDILVNNA 96

Length = 255

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 11/154 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G+ IA + A +G+ VA+   +       A EI  +   +  A ++D SD
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEI-NQAGGKAVAYKLDVSD 60

Query: 74  SRSVREAFE-GVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
              V  A +      G  +V+V NA   P+    T   EI+ +  +K   ++  G     
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPI----TPILEITEEELKKVYNVNVKGVLFGI 116

Query: 132 QQVLSGMVERG-KGTIIFTGCSASLNGIAGFSEL 164
           Q       ++G  G II    +AS+ G  G   L
Sbjct: 117 QAAARQFKKQGHGGKII---NAASIAGHEGNPIL 147

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 20/162 (12%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    +G++ A  FA  G  + + ARD   L   A+E  R   ++V  +  D +D+  
Sbjct: 12  ITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEE-CRALGAEVLVVPTDVTDADQ 70

Query: 77  VREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQV 134
           V+       S  G ++V V N     V      F E   ++ ++ I  + +G    A   
Sbjct: 71  VKALATQAASFGGRIDVWVNNVGVGAVG----RFEETPIEAHEQVIQTNLIGYMRDAHAA 126

Query: 135 LSGMVERGKGTIIFT-------------GCSASLNGIAGFSE 163
           L    ++G G  I                 SAS  G+ GFSE
Sbjct: 127 LPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSE 168

Length = 330

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 5/119 (4%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
           I G    +GR+ A   A  G++V I  ARD       AD + R    +   +  D ++  
Sbjct: 7   ITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV-RAAGGRACVVAGDVANEA 65

Query: 76  SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            V   F+ V  + G ++ LV NA       P    ++     ++    + LGA+LCA++
Sbjct: 66  DVIAMFDAVQSAFGRLDALVNNAGIVAPSMP--LADMDAARLRRMFDTNVLGAYLCARE 122

Length = 248

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 36.0 bits (83), Expect = 0.004
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
          A I+G    +GR++AR  A  G+ + +  RD G L+     +A E  +   A   D +  
Sbjct: 1  ALILGATGGIGRALARALAGRGWRLLLSGRDAGALA----GLAAEVGAL--ARPADVAAE 54

Query: 75 RSVREAFEGVLSLGFVEVLVYNA 97
            V    +    LG +++LVY A
Sbjct: 55 LEVWALAQE---LGPLDLLVYAA 74

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 14 IAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           A + G    +G SIA     EGY V +   R     S  A E+     +     + D S
Sbjct: 3  AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 73 DSRSVREAFEGVL-----SLGFVEVLVYNA 97
          +S ++    E ++     + G  +VLV NA
Sbjct: 63 NSATLFSRCEAIIDACFRAFGRCDVLVNNA 92

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	99.98
PRK05876	275	short chain dehydrogenase; Provisional	99.97
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK07062	265	short chain dehydrogenase; Provisional	99.97
PRK07478	254	short chain dehydrogenase; Provisional	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07791	286	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
PRK07063	260	short chain dehydrogenase; Provisional	99.97
PRK07109	334	short chain dehydrogenase; Provisional	99.97
PRK08589	272	short chain dehydrogenase; Validated	99.97
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.97
PRK05872	296	short chain dehydrogenase; Provisional	99.97
PRK06114	254	short chain dehydrogenase; Provisional	99.97
PRK08862	227	short chain dehydrogenase; Provisional	99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.97
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK07825	273	short chain dehydrogenase; Provisional	99.97
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.97
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.97
PRK06398	258	aldose dehydrogenase; Validated	99.97
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.97
PRK08303	305	short chain dehydrogenase; Provisional	99.97
PRK06194	287	hypothetical protein; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK07677	252	short chain dehydrogenase; Provisional	99.97
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.97
KOG0725	270	consensus Reductases with broad range of substrate	99.97
PRK07035	252	short chain dehydrogenase; Provisional	99.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06125	259	short chain dehydrogenase; Provisional	99.97
PRK08278	273	short chain dehydrogenase; Provisional	99.96
PRK07576	264	short chain dehydrogenase; Provisional	99.96
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.96
PRK09242	257	tropinone reductase; Provisional	99.96
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.96
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PLN02253	280	xanthoxin dehydrogenase	99.96
PRK06172	253	short chain dehydrogenase; Provisional	99.96
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07024	257	short chain dehydrogenase; Provisional	99.96
PRK05599	246	hypothetical protein; Provisional	99.96
PRK08265	261	short chain dehydrogenase; Provisional	99.96
PRK05717	255	oxidoreductase; Validated	99.96
PRK07814	263	short chain dehydrogenase; Provisional	99.96
PRK07890	258	short chain dehydrogenase; Provisional	99.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.96
PRK05866	293	short chain dehydrogenase; Provisional	99.96
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.96
PRK07985	294	oxidoreductase; Provisional	99.96
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.96
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK05854	313	short chain dehydrogenase; Provisional	99.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.96
PRK06180	277	short chain dehydrogenase; Provisional	99.96
PRK05855	582	short chain dehydrogenase; Validated	99.96
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK12747	252	short chain dehydrogenase; Provisional	99.96
PRK05650	270	short chain dehydrogenase; Provisional	99.96
PRK07831	262	short chain dehydrogenase; Provisional	99.96
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.96
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.96
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.96
PRK12743	256	oxidoreductase; Provisional	99.96
PRK06138	252	short chain dehydrogenase; Provisional	99.96
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.96
PRK07454	241	short chain dehydrogenase; Provisional	99.96
PRK07856	252	short chain dehydrogenase; Provisional	99.96
PRK08263	275	short chain dehydrogenase; Provisional	99.96
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK07067	257	sorbitol dehydrogenase; Provisional	99.96
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.96
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06128	300	oxidoreductase; Provisional	99.96
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.96
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.96
PRK09072	263	short chain dehydrogenase; Provisional	99.96
PLN02780	320	ketoreductase/ oxidoreductase	99.96
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.96
PRK08628	258	short chain dehydrogenase; Provisional	99.96
PRK06182	273	short chain dehydrogenase; Validated	99.96
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.96
PRK05993	277	short chain dehydrogenase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK08226	263	short chain dehydrogenase; Provisional	99.96
PRK12939	250	short chain dehydrogenase; Provisional	99.95
PRK08267	260	short chain dehydrogenase; Provisional	99.95
PRK06841	255	short chain dehydrogenase; Provisional	99.95
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07832	272	short chain dehydrogenase; Provisional	99.95
PRK06179	270	short chain dehydrogenase; Provisional	99.95
PRK06523	260	short chain dehydrogenase; Provisional	99.95
PRK08251	248	short chain dehydrogenase; Provisional	99.95
PRK06483	236	dihydromonapterin reductase; Provisional	99.95
PRK09134	258	short chain dehydrogenase; Provisional	99.95
PRK06949	258	short chain dehydrogenase; Provisional	99.95
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
KOG1208	314	consensus Dehydrogenases with different specificit	99.95
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.95
PRK06914	280	short chain dehydrogenase; Provisional	99.95
PRK07904	253	short chain dehydrogenase; Provisional	99.95
PRK08703	239	short chain dehydrogenase; Provisional	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.95
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.95
PRK09186	256	flagellin modification protein A; Provisional	99.95
PLN00015	308	protochlorophyllide reductase	99.95
PRK07775	274	short chain dehydrogenase; Provisional	99.95
PRK06197	306	short chain dehydrogenase; Provisional	99.95
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.95
PRK12937	245	short chain dehydrogenase; Provisional	99.95
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.95
PRK06701	290	short chain dehydrogenase; Provisional	99.95
PRK07774	250	short chain dehydrogenase; Provisional	99.95
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.95
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.95
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.95
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.95
PRK06198	260	short chain dehydrogenase; Provisional	99.95
PRK05875	276	short chain dehydrogenase; Provisional	99.95
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.95
PRK06500	249	short chain dehydrogenase; Provisional	99.95
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.95
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.95
PRK06196	315	oxidoreductase; Provisional	99.94
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.94
PRK10538	248	malonic semialdehyde reductase; Provisional	99.94
PRK07102	243	short chain dehydrogenase; Provisional	99.94
PRK07069	251	short chain dehydrogenase; Validated	99.94
PRK06123	248	short chain dehydrogenase; Provisional	99.94
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06181	263	short chain dehydrogenase; Provisional	99.94
PRK12744	257	short chain dehydrogenase; Provisional	99.94
PRK07326	237	short chain dehydrogenase; Provisional	99.94
PRK06057	255	short chain dehydrogenase; Provisional	99.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.94
PRK07201	657	short chain dehydrogenase; Provisional	99.94
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK05693	274	short chain dehydrogenase; Provisional	99.94
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK12746	254	short chain dehydrogenase; Provisional	99.94
PRK12827	249	short chain dehydrogenase; Provisional	99.94
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.94
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK09291	257	short chain dehydrogenase; Provisional	99.94
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.94
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK12828	239	short chain dehydrogenase; Provisional	99.94
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.94
PRK08324	681	short chain dehydrogenase; Validated	99.94
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.93
PRK06940	275	short chain dehydrogenase; Provisional	99.93
PRK12829	264	short chain dehydrogenase; Provisional	99.93
PRK07060	245	short chain dehydrogenase; Provisional	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK09135	249	pteridine reductase; Provisional	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.93
COG1028	251	FabG Dehydrogenases with different specificities (	99.93
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.93
PRK06101	240	short chain dehydrogenase; Provisional	99.93
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK07023	243	short chain dehydrogenase; Provisional	99.92
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK12742	237	oxidoreductase; Provisional	99.92
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.92
PRK06924	251	short chain dehydrogenase; Provisional	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.92
PRK08264	238	short chain dehydrogenase; Validated	99.92
PRK07577	234	short chain dehydrogenase; Provisional	99.92
PRK07041	230	short chain dehydrogenase; Provisional	99.91
PRK08017	256	oxidoreductase; Provisional	99.91
PRK07578	199	short chain dehydrogenase; Provisional	99.91
PRK05884	223	short chain dehydrogenase; Provisional	99.91
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06720	169	hypothetical protein; Provisional	99.9
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.9
PRK12367	245	short chain dehydrogenase; Provisional	99.9
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.9
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.89
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK08177	225	short chain dehydrogenase; Provisional	99.89
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.89
PRK06953	222	short chain dehydrogenase; Provisional	99.88
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.85
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.85
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.79
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.76
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.75
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.74
PLN03209	576	translocon at the inner envelope of chloroplast su	99.71
PLN02653	340	GDP-mannose 4,6-dehydratase	99.71
PLN02572	442	UDP-sulfoquinovose synthase	99.68
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.67
PLN02583	297	cinnamoyl-CoA reductase	99.67
PLN00198	338	anthocyanidin reductase; Provisional	99.66
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.66
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.66
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.66
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.65
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.65
PLN02240	352	UDP-glucose 4-epimerase	99.65
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.65
PLN02214	342	cinnamoyl-CoA reductase	99.64
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.62
PLN02650	351	dihydroflavonol-4-reductase	99.62
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.6
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.59
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.56
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.53
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.5
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.5
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.5
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.49
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.48
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.48
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.46
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.45
PLN02427	386	UDP-apiose/xylose synthase	99.45
PLN02686	367	cinnamoyl-CoA reductase	99.41
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.37
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.36
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.34
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.33
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.33
CHL00194	317	ycf39 Ycf39; Provisional	99.3
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.3
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.29
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.29
PLN02260	668	probable rhamnose biosynthetic enzyme	99.28
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.27
PRK08309	177	short chain dehydrogenase; Provisional	99.26
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.25
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.22
PRK05865	854	hypothetical protein; Provisional	99.21
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.19
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.18
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.17
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.17
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.13
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.12
PLN02206	442	UDP-glucuronate decarboxylase	99.12
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.11
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.1
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.08
PRK07201	657	short chain dehydrogenase; Provisional	99.06
PLN02503	605	fatty acyl-CoA reductase 2	99.05
PLN02996	491	fatty acyl-CoA reductase	99.05
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.04
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.02
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.01
PLN02778	298	3,5-epimerase/4-reductase	99.0
PRK12320	699	hypothetical protein; Provisional	98.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.94
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.91
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.91
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.88
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.76
PLN00016	378	RNA-binding protein; Provisional	98.73
PLN02260	668	probable rhamnose biosynthetic enzyme	98.73
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.72
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.69
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.66
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.61
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.52
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.5
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.4
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.34
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.34
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.32
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.32
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.31
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.29
PTZ00325	321	malate dehydrogenase; Provisional	98.29
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.28
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.26
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.25
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.23
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.15
COG2910	211	Putative NADH-flavin reductase [General function p	98.14
PRK09620	229	hypothetical protein; Provisional	98.14
PLN00106	323	malate dehydrogenase	98.05
PRK14982	340	acyl-ACP reductase; Provisional	98.01
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.98
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.93
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.86
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.8
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.77
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.75
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.73
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.7
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.65
PRK06849	389	hypothetical protein; Provisional	97.63
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.62
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.59
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.56
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.53
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.51
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.5
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.5
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.47
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.46
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.46
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.43
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.42
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	97.41
PRK05086	312	malate dehydrogenase; Provisional	97.38
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.36
COG3268	382	Uncharacterized conserved protein [Function unknow	97.35
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.33
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.31
PRK14968	188	putative methyltransferase; Provisional	97.31
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.31
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.31
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.3
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.29
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.24
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.21
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.19
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.19
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.18
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.15
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.14
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.11
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.11
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.09
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.09
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.05
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.05
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.04
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.04
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.04
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.04
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.99
PTZ00117	319	malate dehydrogenase; Provisional	96.99
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.96
PLN02602	350	lactate dehydrogenase	96.95
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.93
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.92
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.89
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.89
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.88
PRK09496	453	trkA potassium transporter peripheral membrane com	96.87
PRK04148	134	hypothetical protein; Provisional	96.85
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.84
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.83
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.83
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.83
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.82
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.78
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.75
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.75
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.73
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.71
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.69
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.68
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.67
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.66
PRK09496	453	trkA potassium transporter peripheral membrane com	96.66
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.65
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.63
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.62
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.62
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.61
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.59
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.59
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.57
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.55
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.54
PLN00203	519	glutamyl-tRNA reductase	96.53
PLN02740	381	Alcohol dehydrogenase-like	96.51
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.51
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.51
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.49
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.49
PRK08223	287	hypothetical protein; Validated	96.47
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	96.47
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.46
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.46
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.46
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.45
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.44
PRK05442	326	malate dehydrogenase; Provisional	96.44
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.42
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.41
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.38
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.37
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.37
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.37
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.37
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.36
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.35
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.34
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.34
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.33
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.31
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.3
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.29
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.28
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.28
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	96.28
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.28
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.26
PRK10669	558	putative cation:proton antiport protein; Provision	96.25
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.23
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.23
PTZ00354	334	alcohol dehydrogenase; Provisional	96.22
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.21
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.2
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.2
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.19
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.19
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.17
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.17
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.17
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.15
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.14
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.14
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.14
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.13
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.13
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.13
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.11
PRK08655	437	prephenate dehydrogenase; Provisional	96.1
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.08
PRK06223	307	malate dehydrogenase; Reviewed	96.08
PLN02494	477	adenosylhomocysteinase	96.08
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.08
PRK12480	330	D-lactate dehydrogenase; Provisional	96.08
PLN02928	347	oxidoreductase family protein	96.08
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.08
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.07
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.06
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.04
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.03
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.03
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	96.02
PRK13771	334	putative alcohol dehydrogenase; Provisional	96.02
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.02
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.99
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	95.97
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.95
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.94
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.92
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.91
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.91
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.89
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.84
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.81
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.79
PRK07411	390	hypothetical protein; Validated	95.79
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.78
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.78
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.78
PRK06932	314	glycerate dehydrogenase; Provisional	95.77
PLN02827	378	Alcohol dehydrogenase-like	95.76
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.75
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.74
PRK06487	317	glycerate dehydrogenase; Provisional	95.73
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.72
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.71
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.71
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.69
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.67
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.64
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.63
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	95.63
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	95.63
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.62
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.59
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.56

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=6.8e-37  Score=220.80  Aligned_cols=151  Identities=30%  Similarity=0.397  Sum_probs=144.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++||||++|||.++|++|+++|++|++.+|+.++++++..++..   .++..+..|++|.++++.+++.+. ++++
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            579999999999999999999999999999999999999999988743   578999999999999999999999 9999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||+||||||.   ...+++.+.+.++|+.++++|+.|.++.+++++|.|.+++.|.|||+||+++..++|+...||+|
T Consensus        82 iDiLvNNAGl---~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~AT  156 (246)
T COG4221          82 IDILVNNAGL---ALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGAT  156 (246)
T ss_pred             ccEEEecCCC---CcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhh
Confidence            9999999999   66689999999999999999999999999999999999999999999999999999999999986

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.6e-36  Score=222.83  Aligned_cols=156  Identities=28%  Similarity=0.358  Sum_probs=149.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+++++|||||+|||+++|+.|+++|++|++++|+.++++++.++++...+.++.++.+|++++++++++.+++. +.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            34689999999999999999999999999999999999999999999998778899999999999999999999998 77


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++||+||||||+   ...+++.+.+.++..+++++|+.++..+++.++|.|.+++.|.||||+|.++..|.|..+.|+||
T Consensus        83 ~~IdvLVNNAG~---g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~AT  159 (265)
T COG0300          83 GPIDVLVNNAGF---GTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSAT  159 (265)
T ss_pred             CcccEEEECCCc---CCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHH
Confidence            899999999999   77789999999999999999999999999999999999999999999999999999999999986

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.1e-36  Score=223.37  Aligned_cols=157  Identities=22%  Similarity=0.326  Sum_probs=146.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCc-EEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ-VFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ..+.+|+++||||++|||.++|+.|+++|++++++.|..+++++..++|+...... ++.+++|++|+++++++++++. 
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999999999888887755555 9999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++|++|+||||||+   ......++.+.++++..|++|+.|+..++|+++|.|++++.|+||++||++|..+.|....|+
T Consensus        88 ~fg~vDvLVNNAG~---~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGI---SLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             hcCCCCEEEecCcc---ccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccc
Confidence            99999999999999   567788889999999999999999999999999999999889999999999999999999999


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      ||
T Consensus       165 AS  166 (282)
T KOG1205|consen  165 AS  166 (282)
T ss_pred             hH
Confidence            87

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-34  Score=212.83  Aligned_cols=154  Identities=27%  Similarity=0.358  Sum_probs=147.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +..|+++|||||++|+|+++|.+++++|+++++.+.+.+..+++.+.++. .| +++.+.||+++.+++.+..++++ +.
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~-~g-~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRK-IG-EAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHh-cC-ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999999999999999999999999999987 44 89999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|++|||||+   .+..++.+.+.|+++..+++|+.++|...|+|+|.|.++++|.||+|+|.+|..+.++..+||+|
T Consensus       113 G~V~ILVNNAGI---~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaS  189 (300)
T KOG1201|consen  113 GDVDILVNNAGI---VTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCAS  189 (300)
T ss_pred             CCceEEEecccc---ccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhh
Confidence            999999999999   78889999999999999999999999999999999999999999999999999999999999987

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-32  Score=202.97  Aligned_cols=156  Identities=18%  Similarity=0.281  Sum_probs=141.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+.++++.+.+....+.++.++.+|++|+++++++++++.+++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            35789999999999999999999999999999999998888888777765345678999999999999999999876778


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        85 ~iD~lv~nag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~as  160 (263)
T PRK08339         85 EPDIFFFSTGG---PKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVV  160 (263)
T ss_pred             CCcEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHH
Confidence            99999999998   56678889999999999999999999999999999998888999999999999999999999864

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.7e-31  Score=203.00  Aligned_cols=154  Identities=19%  Similarity=0.242  Sum_probs=144.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.++++. .+.++.++.+|++|+++++++++++. .++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA-LGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999999999988888876 67789999999999999999999998 789


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ...+++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.|+++.|++|
T Consensus        84 ~iD~lVnnAG~---~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         84 RIDVWVNNVGV---GAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             CCCEEEECCCc---CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence            99999999998   67778899999999999999999999999999999999888999999999999999999999875

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=197.00  Aligned_cols=154  Identities=22%  Similarity=0.276  Sum_probs=141.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||+++|||++++++|+++|++|++.+|+.+.++++.+.++. .+.++.++.+|++|+++++++++++. +++
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRA-EGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999998888888877765 56678999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ...+++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+++..|++|
T Consensus        83 ~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (275)
T PRK05876         83 HVDVVFSNAGI---VVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA  159 (275)
T ss_pred             CCCEEEECCCc---CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence            99999999998   6667888999999999999999999999999999998775 6899999999999999999999874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=194.34  Aligned_cols=153  Identities=18%  Similarity=0.259  Sum_probs=135.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+..  ++..+.++. .+.++.++.+|++++++++++++++. .+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999888642  334444444 56688999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+++..|++
T Consensus        82 g~iD~lv~~ag~---~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~a  158 (251)
T PRK12481         82 GHIDILINNAGI---IRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTA  158 (251)
T ss_pred             CCCCEEEECCCc---CCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHH
Confidence            999999999998   6667888899999999999999999999999999998765 589999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       159 s  159 (251)
T PRK12481        159 S  159 (251)
T ss_pred             H
Confidence            5

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-30  Score=193.30  Aligned_cols=156  Identities=19%  Similarity=0.226  Sum_probs=142.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++++++..+.+.... +.++..+.+|++|+++++++++++. +
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999999988888877776533 3478899999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|++
T Consensus        85 ~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a  161 (265)
T PRK07062         85 FGGVDMLVNNAGQ---GRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA  161 (265)
T ss_pred             cCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence            8999999999998   6677888999999999999999999999999999999887899999999999999999888986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       162 s  162 (265)
T PRK07062        162 A  162 (265)
T ss_pred             H
Confidence            4

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-30  Score=192.47  Aligned_cols=155  Identities=25%  Similarity=0.397  Sum_probs=140.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++|||+++|||++++++|+++|++|++++|++++++++.+.++. .+.++.++.+|++++++++++++++. ++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRA-EGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35689999999999999999999999999999999999888888888776 56788999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCccccc
Q 031016           88 GFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSELC  165 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~y~  165 (167)
                      +++|++|||||.   . +..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+. .+.+++..|+
T Consensus        82 ~~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~  158 (254)
T PRK07478         82 GGLDIAFNNAGT---LGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYA  158 (254)
T ss_pred             CCCCEEEECCCC---CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhH
Confidence            999999999997   3 3467788899999999999999999999999999998878899999999886 5778899998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       159 ~s  160 (254)
T PRK07478        159 AS  160 (254)
T ss_pred             HH
Confidence            75

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=7.4e-31  Score=182.85  Aligned_cols=153  Identities=24%  Similarity=0.269  Sum_probs=139.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ...|.++|||+++|||+++++.|+..|++|++.+++.+..+++...|.. + .+-..+.||++++++++..+++.. .+|
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g-~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG-Y-GDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC-C-CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            3579999999999999999999999999999999999888888888754 2 466788999999999999999999 999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++++|||||+   ..+..+..++.++|+..+.+|+.+.|+++|++.+.|...  +.++|||+||+.+.++.-++..|+|
T Consensus        90 ~psvlVncAGI---trD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAA  166 (256)
T KOG1200|consen   90 TPSVLVNCAGI---TRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAA  166 (256)
T ss_pred             CCcEEEEcCcc---ccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhh
Confidence            99999999999   888889999999999999999999999999999995443  3459999999999999999999998


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       167 s  167 (256)
T KOG1200|consen  167 S  167 (256)
T ss_pred             h
Confidence            6

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.2e-30  Score=195.19  Aligned_cols=151  Identities=17%  Similarity=0.226  Sum_probs=128.9

Q ss_pred             CCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+|+++||||+  +|||+++|++|+++|++|++.+|+.+ ..+..+.+....+.+ .++.+|++|+++++++++++. +
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999997  79999999999999999999998853 222233332213434 678999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           87 LGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      ++++|++|||||+   ..    ..++.+.+.++|++++++|+.+++++++.++|.|.+  +|+||++||..+..+.|++.
T Consensus        81 ~g~iDilVnnAG~---~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~  155 (274)
T PRK08415         81 LGKIDFIVHSVAF---APKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYN  155 (274)
T ss_pred             cCCCCEEEECCcc---CcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcch
Confidence            8999999999998   43    357888999999999999999999999999999976  37999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       156 ~Y~as  160 (274)
T PRK08415        156 VMGVA  160 (274)
T ss_pred             hhhhH
Confidence            99875

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=196.44  Aligned_cols=154  Identities=22%  Similarity=0.268  Sum_probs=138.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh---------hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL---------GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      +++|+++||||++|||++++++|+++|++|++++++.         +.++++.+++.. .+.++.++.+|++|+++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-AGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh-cCCceEEEeCCCCCHHHHHHH
Confidence            4689999999999999999999999999999988765         666777777765 567888999999999999999


Q ss_pred             HHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC------CceEEEecCCc
Q 031016           81 FEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG------KGTIIFTGCSA  153 (167)
Q Consensus        81 ~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~iss~~  153 (167)
                      ++++. +++++|++|||||+   ....++.+.+.++|++.+++|+.+++.+++.++|.|.++.      .|+||++||.+
T Consensus        83 ~~~~~~~~g~id~lv~nAG~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~  159 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGI---LRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGA  159 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchh
Confidence            99998 88999999999998   6667888999999999999999999999999999997642      37999999999


Q ss_pred             cccCCCCccccccC
Q 031016          154 SLNGIAGFSELCKN  167 (167)
Q Consensus       154 ~~~~~~~~~~y~as  167 (167)
                      +..+.+++..|++|
T Consensus       160 ~~~~~~~~~~Y~as  173 (286)
T PRK07791        160 GLQGSVGQGNYSAA  173 (286)
T ss_pred             hCcCCCCchhhHHH
Confidence            99999999999875

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.2e-30  Score=182.74  Aligned_cols=147  Identities=24%  Similarity=0.437  Sum_probs=136.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC--hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD--LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..+++.+.++. .+.++.++.+|++++++++++++++. +++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKA-PGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHH-TTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence            7899999999999999999999976 67778888  6777888888886 67899999999999999999999999 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ...+++.+.+.|+|++++++|+.+++.+.+.+.|    ++.|+||++||.++..|.|++.+|++|
T Consensus        80 ~ld~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~as  151 (167)
T PF00106_consen   80 PLDILINNAGI---FSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSAS  151 (167)
T ss_dssp             SESEEEEECSC---TTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHH
T ss_pred             ccccccccccc---ccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHH
Confidence            99999999999   7788999999999999999999999999999999    447899999999999999999999874

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=5.1e-30  Score=190.88  Aligned_cols=158  Identities=23%  Similarity=0.237  Sum_probs=143.6

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.+++.+|+++||||+++||++++++|+++|++|++++|+++.++++.++++. .+.++..+.+|++++++++++++++.
T Consensus         3 ~~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (254)
T PRK08085          3 DLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ-EGIKAHAAPFNVTHKQEVEAAIEHIE   81 (254)
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998888888877765 55678889999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                       +++++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+.+.+.+.+.+++.|+||++||..+..+.+++..|
T Consensus        82 ~~~~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (254)
T PRK08085         82 KDIGPIDVLINNAGI---QRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPY  158 (254)
T ss_pred             HhcCCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcch
Confidence             88999999999998   66678889999999999999999999999999999988777899999999998898888889


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       159 ~~s  161 (254)
T PRK08085        159 AAS  161 (254)
T ss_pred             HHH
Confidence            864

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-30  Score=191.92  Aligned_cols=155  Identities=30%  Similarity=0.399  Sum_probs=140.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++|||+++|||++++++|+++|++|++++|+++..++..+.+... .+.++.++.+|++++++++++++++. ++
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999988888887777542 24578899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....+..+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++.+|++|
T Consensus        85 g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (260)
T PRK07063         85 GPLDVLVNNAGI---NVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA  161 (260)
T ss_pred             CCCcEEEECCCc---CCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence            999999999998   55666778889999999999999999999999999988877999999999999999999999875

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.7e-30  Score=197.15  Aligned_cols=154  Identities=27%  Similarity=0.396  Sum_probs=143.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.++++. .+.++.++.+|++|+++++++++++. +++
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~-~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA-AGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            5689999999999999999999999999999999999888888888876 67789999999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.+++++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+.+..|++|
T Consensus        85 ~iD~lInnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  160 (334)
T PRK07109         85 PIDTWVNNAMV---TVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAA  160 (334)
T ss_pred             CCCEEEECCCc---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHH
Confidence            99999999998   66678889999999999999999999999999999998878999999999999999999999864

>PRK08589 short chain dehydrogenase; Validated

Probab=99.97  E-value=8.8e-30  Score=191.63  Aligned_cols=152  Identities=26%  Similarity=0.303  Sum_probs=137.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||+++|||++++++|+++|++|++++|+ +.+++..+.++. .+.++..+.+|++++++++++++++. +++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999999 777777777765 56689999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   .. ..++.+.+.++|++++++|+.+++.+++.++|.|.+++ |+||++||..+..+.++...|++|
T Consensus        82 ~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as  157 (272)
T PRK08589         82 RVDVLFNNAGV---DNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAA  157 (272)
T ss_pred             CcCEEEECCCC---CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHH
Confidence            99999999998   43 45777889999999999999999999999999998765 899999999999998899999875

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=5.9e-30  Score=192.62  Aligned_cols=151  Identities=18%  Similarity=0.224  Sum_probs=128.8

Q ss_pred             CCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++|||+++  |||+++|++|+++|++|++.+|+....++. +.+....+. ...+.+|++|+++++++++++. +
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH-HHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence            5689999999996  999999999999999999999875433333 333221333 3578999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           87 LGFVEVLVYNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      +|++|++|||||.   ...    .++.+.+.++|++.+++|+.++++++|.++|.|.+  +|+||++||..+..+.|++.
T Consensus        83 ~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~  157 (271)
T PRK06505         83 WGKLDFVVHAIGF---SDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYN  157 (271)
T ss_pred             hCCCCEEEECCcc---CCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccc
Confidence            9999999999998   332    46778999999999999999999999999999974  48999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      +|++|
T Consensus       158 ~Y~as  162 (271)
T PRK06505        158 VMGVA  162 (271)
T ss_pred             hhhhh
Confidence            99875

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=6e-30  Score=190.64  Aligned_cols=149  Identities=15%  Similarity=0.184  Sum_probs=130.0

Q ss_pred             CCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||+  +|||++++++|+++|++|++.+|+. +..+..+++   .+.++.++.+|++|+++++++++++. +
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKL---VDEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhh---ccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            568999999999  7999999999999999999999873 333333333   23468889999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           87 LGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      ++++|++|||||.   ..    .+++.+.+.++|+..+++|+.+++.+++.++|.|.+  .|+||++||..+..+.+++.
T Consensus        81 ~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~  155 (252)
T PRK06079         81 VGKIDGIVHAIAY---AKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYN  155 (252)
T ss_pred             hCCCCEEEEcccc---cccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcch
Confidence            8999999999998   33    267888999999999999999999999999999965  48999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       156 ~Y~as  160 (252)
T PRK06079        156 VMGIA  160 (252)
T ss_pred             hhHHH
Confidence            99875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.3e-29  Score=189.49  Aligned_cols=157  Identities=13%  Similarity=0.146  Sum_probs=131.1

Q ss_pred             CCCCCCCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      |.+.+++++|+++||||+  +|||++++++|+++|++|++++|+.+..+.+ +.+.... ....++.+|++|++++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYV-EPLAEEL-DAPIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHH-HHHHHhh-ccceEEecCcCCHHHHHHHH
Confidence            445556789999999998  5999999999999999999999876433222 2232212 23567899999999999999


Q ss_pred             HHHH-hcCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           82 EGVL-SLGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        82 ~~~~-~~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      +++. +++++|++|||||.   .+    ..++.+.+.++|++++++|+.+++++++.++|.|++  .|+||++||..+..
T Consensus        80 ~~~~~~~g~ld~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~  154 (258)
T PRK07533         80 ARIAEEWGRLDFLLHSIAF---APKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEK  154 (258)
T ss_pred             HHHHHHcCCCCEEEEcCcc---CCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEecccccc
Confidence            9998 88999999999997   33    256788999999999999999999999999999964  47999999999988


Q ss_pred             CCCCccccccC
Q 031016          157 GIAGFSELCKN  167 (167)
Q Consensus       157 ~~~~~~~y~as  167 (167)
                      +.+++..|++|
T Consensus       155 ~~~~~~~Y~as  165 (258)
T PRK07533        155 VVENYNLMGPV  165 (258)
T ss_pred             CCccchhhHHH
Confidence            88999999874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=6.8e-30  Score=179.30  Aligned_cols=151  Identities=23%  Similarity=0.280  Sum_probs=136.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.|-++|||||++|||++++++|.+.|-+|++.+|+++++.+....     ...++...||+.|.++.+++++.+. ++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~-----~p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE-----NPEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc-----CcchheeeecccchhhHHHHHHHHHhhC
Confidence            45789999999999999999999999999999999999998877653     4568899999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCC--CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNF--TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +.++++|||||+   ...-.+  .+...++.++.+++|+.+|+++++.|+|++.+++.+.||++||..+..|......||
T Consensus        77 P~lNvliNNAGI---qr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYc  153 (245)
T COG3967          77 PNLNVLINNAGI---QRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYC  153 (245)
T ss_pred             Cchheeeecccc---cchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccch
Confidence            999999999999   443333  345568889999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      ++
T Consensus       154 aT  155 (245)
T COG3967         154 AT  155 (245)
T ss_pred             hh
Confidence            85

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=192.69  Aligned_cols=153  Identities=22%  Similarity=0.419  Sum_probs=138.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+.++++.+.+..  +.++..+.+|++|+++++++++++. ++
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999999999888887776632  4467778899999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++++++|+.+++++++.++|.|.++ .|+||++||..+..+.+++..|++|
T Consensus        84 g~id~vI~nAG~---~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  159 (296)
T PRK05872         84 GGIDVVVANAGI---ASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCAS  159 (296)
T ss_pred             CCCCEEEECCCc---CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHH
Confidence            999999999998   667888999999999999999999999999999999875 4899999999999999999999875

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-29  Score=187.86  Aligned_cols=155  Identities=22%  Similarity=0.285  Sum_probs=137.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++|||+++|||+++|++|+++|++|++++|+.+ .++++.+.+.. .+.++.++.+|++|+++++++++++. +
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999998754 45677777765 56678899999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC--cccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG--FSEL  164 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--~~~y  164 (167)
                      ++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++  +..|
T Consensus        84 ~g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  160 (254)
T PRK06114         84 LGALTLAVNAAGI---ANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHY  160 (254)
T ss_pred             cCCCCEEEECCCC---CCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchH
Confidence            8999999999998   6667888899999999999999999999999999998887899999999998877654  6788


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       161 ~~s  163 (254)
T PRK06114        161 NAS  163 (254)
T ss_pred             HHH
Confidence            764

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-29  Score=184.49  Aligned_cols=153  Identities=22%  Similarity=0.282  Sum_probs=135.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++|||+++|||++++++|+++|++|++.+|+.+.++++.+.+.. .+.++..+.+|++++++++++++++. ++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSA-LTDNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999988888888866 56678889999999999999999998 88


Q ss_pred             C-CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccc
Q 031016           88 G-FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        88 ~-~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      + ++|++|||+|.  .....++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+   .+++..|+
T Consensus        81 g~~iD~li~nag~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~  155 (227)
T PRK08862         81 NRAPDVLVNNWTS--SPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVE  155 (227)
T ss_pred             CCCCCEEEECCcc--CCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhH
Confidence            8 99999999986  13456788999999999999999999999999999998764 689999999654   35677787


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       156 as  157 (227)
T PRK08862        156 SS  157 (227)
T ss_pred             HH
Confidence            64

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-29  Score=187.68  Aligned_cols=155  Identities=28%  Similarity=0.392  Sum_probs=137.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++|||+++|||++++++|+++|++|++.+|+.+.++++.+.++. .+.++..+.+|++++++++++++++. ++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT-SGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998888888888776 56678899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCC-C-Ccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGI-A-GFSEL  164 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~-~-~~~~y  164 (167)
                      +++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|+||++||..+..+. + ++..|
T Consensus        85 g~id~lv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y  161 (253)
T PRK05867         85 GGIDIAVCNAGI---ITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHY  161 (253)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccch
Confidence            999999999998   6667888899999999999999999999999999998765 5799999998886543 3 45788


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       162 ~as  164 (253)
T PRK05867        162 CAS  164 (253)
T ss_pred             HHH
Confidence            764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.97  E-value=1.4e-29  Score=189.28  Aligned_cols=152  Identities=17%  Similarity=0.230  Sum_probs=130.7

Q ss_pred             CCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChh--hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLG--RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++|+++|||++  +|||+++|++|+++|++|++.+|+.+  +.++..+++.. ...+..++.+|++|+++++++++++.
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHHHHHH
Confidence            568999999986  89999999999999999988876543  34445555544 33457788999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           86 -SLGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                       +++++|++|||||.   ..    ..++.+.+.++|++.+++|+.+++.+++.++|.|.+  .|+||++||..+..+.|+
T Consensus        83 ~~~g~iD~lv~nag~---~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~  157 (258)
T PRK07370         83 QKWGKLDILVHCLAF---AGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPN  157 (258)
T ss_pred             HHcCCCCEEEEcccc---cCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcc
Confidence             88999999999997   32    357888999999999999999999999999999975  389999999999999999


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       158 ~~~Y~as  164 (258)
T PRK07370        158 YNVMGVA  164 (258)
T ss_pred             cchhhHH
Confidence            9999875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-29  Score=187.26  Aligned_cols=156  Identities=20%  Similarity=0.236  Sum_probs=140.1

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+.+++|+++||||+++||++++++|+++|++|++++|+ +..+++.+.+.. .+.++.++.+|++++++++++++++. 
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999988 555666666655 56678999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      .++++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|+
T Consensus        88 ~~g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (258)
T PRK06935         88 EFGKIDILVNNAGT---IRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYT  164 (258)
T ss_pred             HcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhH
Confidence            88999999999998   566788888999999999999999999999999999988889999999999999989999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       165 as  166 (258)
T PRK06935        165 AS  166 (258)
T ss_pred             HH
Confidence            74

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-29  Score=187.30  Aligned_cols=159  Identities=16%  Similarity=0.220  Sum_probs=137.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++||||++|||++++++|+++|++|++.+| +++.+++..+.++...+.++.++.+|++|+++++++++++. +
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999988865 55666666666655356689999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCC---CCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           87 LGFVEVLVYNAYQPVS---WQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                      ++++|++|||||....   ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAG  164 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCccc
Confidence            8999999999986210   0134667788999999999999999999999999999877789999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       165 Y~as  168 (260)
T PRK08416        165 HGTS  168 (260)
T ss_pred             chhh
Confidence            9875

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-29  Score=188.25  Aligned_cols=151  Identities=25%  Similarity=0.298  Sum_probs=137.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++++++||||++|||++++++|+++|++|++.+|+++.++++.+.+.     ++.++.+|++++++++++++.+. .+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999999887776655542     47788999999999999999998 78


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||+|.   ....++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        77 ~~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  153 (273)
T PRK07825         77 GPIDVLVNNAGV---MPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCAS  153 (273)
T ss_pred             CCCCEEEECCCc---CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHH
Confidence            999999999999   66778888999999999999999999999999999999888999999999999999999999875

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-29  Score=186.03  Aligned_cols=155  Identities=23%  Similarity=0.336  Sum_probs=142.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++|||++++||++++++|+++|++|++++|++++.+++.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999998888887777765 56678999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.|+||++||..+..+.+++..|++|
T Consensus        86 ~~~d~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s  162 (255)
T PRK07523         86 GPIDILVNNAGM---QFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTAT  162 (255)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHH
Confidence            999999999998   66778889999999999999999999999999999998878999999999998898999999864

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.2e-29  Score=187.30  Aligned_cols=151  Identities=17%  Similarity=0.210  Sum_probs=129.9

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecCh---hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDL---GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      ++++|+++|||++  +|||+++|++|+++|++|++.+|+.   +.++++.+.+   .+.++.++.+|++|++++++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL---EGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc---CCCceEEEecCCCCHHHHHHHHHH
Confidence            3568999999997  8999999999999999999988753   2333443332   245788999999999999999999


Q ss_pred             HH-hcCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      +. ++|++|++|||||+   ..    ..++.+.+.++|+..+++|+.+++.+++.++|.|.+  .|+||++||..+..+.
T Consensus        81 ~~~~~g~ld~lv~nag~---~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~  155 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAF---ANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVV  155 (257)
T ss_pred             HHHhCCCccEEEECccc---CCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCC
Confidence            98 88999999999997   33    356778899999999999999999999999999965  4899999999999999


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      +++..|++|
T Consensus       156 ~~~~~Y~as  164 (257)
T PRK08594        156 QNYNVMGVA  164 (257)
T ss_pred             CCCchhHHH
Confidence            999999875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=7.9e-29  Score=185.66  Aligned_cols=156  Identities=22%  Similarity=0.270  Sum_probs=143.0

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+.+|+++|||++++||++++++|+++|++|++++|+++.+++..+.++. .+.++.++.+|++++++++++++++. +
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE-LGIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999998888888777766 66789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+.+.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus        85 ~~~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (265)
T PRK07097         85 VGVIDILVNNAGI---IKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA  161 (265)
T ss_pred             CCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence            8999999999998   6667888999999999999999999999999999999887899999999999988888988986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       162 s  162 (265)
T PRK07097        162 A  162 (265)
T ss_pred             H
Confidence            4

>PRK06398 aldose dehydrogenase; Validated

Probab=99.97  E-value=4.4e-29  Score=186.51  Aligned_cols=143  Identities=19%  Similarity=0.268  Sum_probs=131.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||+++|||++++++|+++|++|++++|+...            ..++.++.+|++++++++++++++. +++
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------YNDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc------------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999987542            1257889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        72 ~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  147 (258)
T PRK06398         72 RIDILVNNAGI---ESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTS  147 (258)
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhh
Confidence            99999999998   66778899999999999999999999999999999988778999999999999999999999875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=7.1e-29  Score=185.65  Aligned_cols=155  Identities=15%  Similarity=0.200  Sum_probs=129.0

Q ss_pred             CCCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++||||++  |||+++|++|+++|++|++.+|++ ..++..+.+....+.. .++.+|++|+++++++++++. 
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~-~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCN-FVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCc-eEEEccCCCHHHHHHHHHHHHH
Confidence            35689999999997  999999999999999999988874 3344444454323333 467899999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++++|++|||+|..... ...++.+.+.++|++.+++|+.+++.+++.+.|.|.+  +|+||++||..+..+.+++..|
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y  160 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVM  160 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccch
Confidence            889999999999972100 1246778999999999999999999999999999964  4899999999999899999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       161 ~as  163 (260)
T PRK06603        161 GVA  163 (260)
T ss_pred             hhH
Confidence            875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.97  E-value=7.6e-29  Score=186.85  Aligned_cols=162  Identities=23%  Similarity=0.321  Sum_probs=142.0

Q ss_pred             CCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            5 TSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         5 ~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      ...+.+++|+++|||++++||++++++|+++|++|++++|+.+..+++.+.+.. .+.++.++.+|++++++++++++++
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA-AGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence            334456799999999999999999999999999999999998888888777766 5668899999999999999999999


Q ss_pred             H-hcCCccEEEEcCCCCCCC------------CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecC
Q 031016           85 L-SLGFVEVLVYNAYQPVSW------------QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC  151 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag~~~~~------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  151 (167)
                      . +++++|++|||||.....            ...++.+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            8 889999999999962110            113467888999999999999999999999999998887899999999


Q ss_pred             CccccCCCCccccccC
Q 031016          152 SASLNGIAGFSELCKN  167 (167)
Q Consensus       152 ~~~~~~~~~~~~y~as  167 (167)
                      ..+..+.+++..|++|
T Consensus       162 ~~~~~~~~~~~~Y~~s  177 (278)
T PRK08277        162 MNAFTPLTKVPAYSAA  177 (278)
T ss_pred             chhcCCCCCCchhHHH
Confidence            9999999999999875

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.3e-29  Score=190.28  Aligned_cols=157  Identities=16%  Similarity=0.111  Sum_probs=131.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh----------hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL----------GRLSRFADEIAREEKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   79 (167)
                      +++|+++||||++|||+++|++|+++|++|++++|+.          +.++++.+.++. .+.++.++.+|+++++++++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHHHHH
Confidence            5789999999999999999999999999999999873          345566666655 56678899999999999999


Q ss_pred             HHHHHH-hcCCccEEEEcC-CCCCC-CCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           80 AFEGVL-SLGFVEVLVYNA-YQPVS-WQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        80 ~~~~~~-~~~~i~~lv~~a-g~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      +++++. ++|+||++|||| |.... ....++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence            999998 889999999999 75100 112567788899999999999999999999999999887779999999976643


Q ss_pred             ---CCCCccccccC
Q 031016          157 ---GIAGFSELCKN  167 (167)
Q Consensus       157 ---~~~~~~~y~as  167 (167)
                         +.+++..|++|
T Consensus       165 ~~~~~~~~~~Y~as  178 (305)
T PRK08303        165 NATHYRLSVFYDLA  178 (305)
T ss_pred             cCcCCCCcchhHHH
Confidence               23456778864

>PRK06194 hypothetical protein; Provisional

Probab=99.97  E-value=6.8e-29  Score=187.82  Aligned_cols=154  Identities=21%  Similarity=0.231  Sum_probs=139.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|++|||||+++||++++++|+++|++|++++|+.+.+++..+.+.. .+.++.++.+|++|+++++++++++. +++
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA-QGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999999999998887777777765 46678999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC------ceEEEecCCccccCCCCcc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK------GTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------g~iv~iss~~~~~~~~~~~  162 (167)
                      ++|++|||||.   ....++.+.+.++|+..+++|+.+++.+++.++|.|.++..      |+||++||..+..+.+++.
T Consensus        83 ~id~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  159 (287)
T PRK06194         83 AVHLLFNNAGV---GAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMG  159 (287)
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence            99999999998   66677888999999999999999999999999999988754      7999999999999989999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       160 ~Y~~s  164 (287)
T PRK06194        160 IYNVS  164 (287)
T ss_pred             chHHH
Confidence            99864

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=1e-29  Score=188.78  Aligned_cols=156  Identities=29%  Similarity=0.356  Sum_probs=139.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++||||+.|||++.+++|+++|.+|++++|++++++.+.+++...++.+++++.+|+++++++-+.+.+.....+|
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            46999999999999999999999999999999999999999999998878889999999999988733333332233579


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      .+||||+|.++. .+..+.+.+.++++..+++|..++..+++.++|.|.++++|.|||+||.++..|.|.++.|++|
T Consensus       128 gILVNNvG~~~~-~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysas  203 (312)
T KOG1014|consen  128 GILVNNVGMSYD-YPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSAS  203 (312)
T ss_pred             EEEEecccccCC-CcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHH
Confidence            999999999543 3677888988899999999999999999999999999999999999999999999999999985

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.9e-29  Score=184.07  Aligned_cols=152  Identities=25%  Similarity=0.379  Sum_probs=137.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.++++.+.++. .+.++.++.+|++++++++++++++. +++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            58999999999999999999999999999999998888887777765 45688999999999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||+|.   ....++.+.+.++|++++++|+.+++.+++++++.|.++. .|+||++||..+..+.+++.+|++|
T Consensus        80 d~lI~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  154 (252)
T PRK07677         80 DALINNAAG---NFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  154 (252)
T ss_pred             cEEEECCCC---CCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHH
Confidence            999999997   4556788899999999999999999999999999987653 6899999999998888888888865

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=5e-29  Score=186.59  Aligned_cols=152  Identities=16%  Similarity=0.138  Sum_probs=127.0

Q ss_pred             CCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||  ++|||+++|++|+++|++|++.+|++ +..+..+++....+ ....+.+|++|+++++++++++. +
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999997  67999999999999999999987764 33333444433123 34678999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCC----C-CCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQP----T-NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~----~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++++|++|||||+   ...    . .+++.+.++|+..+++|+.+++++++.+.|.|+++ +|+||++||..+..+.|++
T Consensus        82 ~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~  157 (261)
T PRK08690         82 WDGLDGLVHSIGF---APKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNY  157 (261)
T ss_pred             hCCCcEEEECCcc---CCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCc
Confidence            9999999999998   432    1 24567889999999999999999999999999765 4899999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       158 ~~Y~as  163 (261)
T PRK08690        158 NVMGMA  163 (261)
T ss_pred             ccchhH
Confidence            999875

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-28  Score=183.46  Aligned_cols=156  Identities=21%  Similarity=0.224  Sum_probs=143.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++|||++++||++++++|+++|++|++++|+++.++++.+.++. .+.++.++.+|+++++++.++++++. .
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            446899999999999999999999999999999999998888888887766 56678999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+.+.+++.|.+++.+++|++||..+..+.+++.+|++
T Consensus        86 ~~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  162 (256)
T PRK06124         86 HGRLDILVNNVGA---RDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPA  162 (256)
T ss_pred             cCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHH
Confidence            8999999999998   6667888899999999999999999999999999998887899999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       163 s  163 (256)
T PRK06124        163 A  163 (256)
T ss_pred             H
Confidence            4

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.97  E-value=1.3e-28  Score=184.72  Aligned_cols=158  Identities=25%  Similarity=0.294  Sum_probs=137.4

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      ..++.+|+++|||++.|||+++|++|++.|++|++.+|+.+.+++....+...  .+.++..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888777652  2346999999999999999999999


Q ss_pred             H-h-cCCccEEEEcCCCCCCCCCC-CCCCCCHHHHHHHhhhhhHH-HHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           85 L-S-LGFVEVLVYNAYQPVSWQPT-NFTEISFDSFQKSIAISSLG-AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        85 ~-~-~~~i~~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      . + +|+||++|||||.   .... ++.+.+.|+|+..+++|+.+ .+.+.+.+.++++++++|.|+++||..+..+.++
T Consensus        83 ~~~~~GkidiLvnnag~---~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~  159 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGA---LGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG  159 (270)
T ss_pred             HHHhCCCCCEEEEcCCc---CCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC
Confidence            8 7 7999999999999   4444 79999999999999999995 6667777777777777899999999999888766


Q ss_pred             c-cccccC
Q 031016          161 F-SELCKN  167 (167)
Q Consensus       161 ~-~~y~as  167 (167)
                      . .+|++|
T Consensus       160 ~~~~Y~~s  167 (270)
T KOG0725|consen  160 SGVAYGVS  167 (270)
T ss_pred             CcccchhH
Confidence            6 788764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-28  Score=182.38  Aligned_cols=157  Identities=20%  Similarity=0.243  Sum_probs=141.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++|||++++||++++++|+++|++|++++|+.+.++++.+.+.. .+.++.++.+|+++.++++++++++. .
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA-AGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999998888888888766 56678899999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++||++|.  .....++.+.+.++|+..+++|+.+++.+++.++|++.+++.++||++||..+..+.+++..|++
T Consensus        83 ~~~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  160 (252)
T PRK07035         83 HGRLDILVNNAAA--NPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSI  160 (252)
T ss_pred             cCCCCEEEECCCc--CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHH
Confidence            8999999999997  12345777889999999999999999999999999998877899999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       161 s  161 (252)
T PRK07035        161 T  161 (252)
T ss_pred             H
Confidence            4

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=7e-29  Score=185.98  Aligned_cols=151  Identities=14%  Similarity=0.135  Sum_probs=127.3

Q ss_pred             CCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||++  |||++++++|+++|++|++.+|+. +.++..+++.. ...+...+.+|++|+++++++++++. +
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            4689999999986  999999999999999999988873 44444555544 23456788999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCC-----CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTN-----FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++++|++|||||+   .+..+     +.+.+.++|+..+++|+.+++.+.+.+.|.+.+  +|+||++||..+..+.+++
T Consensus        82 ~g~iD~linnAg~---~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~  156 (262)
T PRK07984         82 WPKFDGFVHSIGF---APGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNY  156 (262)
T ss_pred             cCCCCEEEECCcc---CCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCc
Confidence            8999999999997   33222     567889999999999999999999999986643  4899999999998899999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       157 ~~Y~as  162 (262)
T PRK07984        157 NVMGLA  162 (262)
T ss_pred             chhHHH
Confidence            999875

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=183.39  Aligned_cols=153  Identities=20%  Similarity=0.236  Sum_probs=137.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++|+++|||+++|||++++++|+++|++|++++|+++.+++..+.+....+.++.++.+|++++++++++++..   +
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~---g   80 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA---G   80 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh---C
Confidence            3568999999999999999999999999999999999888888877776534667899999999999998887754   8


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|+..+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        81 ~id~lv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         81 DIDILVNNAGA---IPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence            99999999998   66778899999999999999999999999999999998777899999999998888888888754

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-28  Score=184.75  Aligned_cols=155  Identities=21%  Similarity=0.249  Sum_probs=137.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-------HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-------LSRFADEIAREEKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.+.       +++..+.++. .+.++.++.+|+++++++++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA-AGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHH
Confidence            3568999999999999999999999999999999987542       3455555655 5668999999999999999999


Q ss_pred             HHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC--
Q 031016           82 EGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI--  158 (167)
Q Consensus        82 ~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--  158 (167)
                      +++. +++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.|+||++||..+..+.  
T Consensus        82 ~~~~~~~g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  158 (273)
T PRK08278         82 AKAVERFGGIDICVNNASA---INLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWF  158 (273)
T ss_pred             HHHHHHhCCCCEEEECCCC---cCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccccc
Confidence            9988 88999999999998   66678888999999999999999999999999999998877899999999888876  


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      +++..|++|
T Consensus       159 ~~~~~Y~~s  167 (273)
T PRK08278        159 APHTAYTMA  167 (273)
T ss_pred             CCcchhHHH
Confidence            888899875

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-28  Score=183.83  Aligned_cols=155  Identities=19%  Similarity=0.280  Sum_probs=138.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||+++||.+++++|+++|++|++++|+.+.+++..+.+.. .+.++.++.+|++++++++++++++. .
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-AGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999998887777777765 45677889999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.++++++|.|.++ +|+||++||..+..+.+++..|++
T Consensus        84 ~~~iD~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~a  159 (264)
T PRK07576         84 FGPIDVLVSGAAG---NFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCA  159 (264)
T ss_pred             cCCCCEEEECCCC---CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHH
Confidence            8999999999997   555678889999999999999999999999999999765 489999999999888899888976


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       160 s  160 (264)
T PRK07576        160 A  160 (264)
T ss_pred             H
Confidence            4

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.96  E-value=1.7e-28  Score=182.71  Aligned_cols=155  Identities=16%  Similarity=0.238  Sum_probs=135.6

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+.+++|+++|||+++|||++++++|+++|++|++++++..  ++..+.+.. .+.++..+.+|++|+++++++++++. 
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999998876532  344445544 45678899999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|+||++||..+..+.+++..|
T Consensus        82 ~~~~~D~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (253)
T PRK08993         82 EFGHIDILVNNAGL---IRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSY  158 (253)
T ss_pred             HhCCCCEEEECCCC---CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcch
Confidence            88999999999998   6667788899999999999999999999999999998764 5899999999999998888999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       159 ~~s  161 (253)
T PRK08993        159 TAS  161 (253)
T ss_pred             HHH
Confidence            875

>PRK09242 tropinone reductase; Provisional

Probab=99.96  E-value=2.1e-28  Score=182.44  Aligned_cols=156  Identities=22%  Similarity=0.243  Sum_probs=141.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++|||++++||++++++|+++|++|++++|+.+..++..+.+... .+.++.++.+|++++++++++++++. +
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999988888887777652 25678999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++||++|.   ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++
T Consensus        86 ~g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         86 WDGLHILVNNAGG---NIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             cCCCCEEEECCCC---CCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            8999999999998   5666788899999999999999999999999999998877789999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       163 s  163 (257)
T PRK09242        163 T  163 (257)
T ss_pred             H
Confidence            4

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.96  E-value=2.6e-29  Score=178.88  Aligned_cols=149  Identities=17%  Similarity=0.261  Sum_probs=133.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |+++||++++||+.||||+++++.|+++|..+.++..+.+..+...+.-+..+..++.++.||+++..++++.++++. .
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999888887777776665554444355689999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~  163 (167)
                      +|.||++||+||+           .+.++|++.+++|+.+.+.-+...+|+|.+++   +|-|||+||.+|+.|.|.++.
T Consensus        81 fg~iDIlINgAGi-----------~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pV  149 (261)
T KOG4169|consen   81 FGTIDILINGAGI-----------LDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPV  149 (261)
T ss_pred             hCceEEEEccccc-----------ccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchh
Confidence            9999999999999           34678999999999999999999999999876   589999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |+||
T Consensus       150 Y~As  153 (261)
T KOG4169|consen  150 YAAS  153 (261)
T ss_pred             hhhc
Confidence            9987

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.9e-28  Score=182.89  Aligned_cols=154  Identities=18%  Similarity=0.291  Sum_probs=135.2

Q ss_pred             CCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecC-----------hhhHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016           10 SCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARD-----------LGRLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus        10 ~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      +++|+++|||++  +|||+++|++|+++|++|+++++.           .+...+..+.++. .+.++.++.+|++++++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLTQNDA   82 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHH
Confidence            568999999998  599999999999999999887532           2223345555555 57789999999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++++++++. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+.+.++|.|.+++.|+||++||..+.
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  159 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAY---STNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence            999999998 88999999999998   56678889999999999999999999999999999988778999999999999


Q ss_pred             cCCCCccccccC
Q 031016          156 NGIAGFSELCKN  167 (167)
Q Consensus       156 ~~~~~~~~y~as  167 (167)
                      .+.+++..|++|
T Consensus       160 ~~~~~~~~Y~~s  171 (256)
T PRK12859        160 GPMVGELAYAAT  171 (256)
T ss_pred             CCCCCchHHHHH
Confidence            999999999874

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=2.5e-28  Score=181.91  Aligned_cols=152  Identities=24%  Similarity=0.358  Sum_probs=139.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++|||++++||++++++|+++|++|++++|+.+..+++...+.. .+.++.++.+|++++++++++++++. +++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK-DGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999998888888777765 56678899999999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||+|.   ....++.+.+.++|+.++++|+.+++.+++.+.+.|.+.+ .|+||++||..+..+.+++..|++|
T Consensus        81 d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  155 (256)
T PRK08643         81 NVVVNNAGV---APTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSST  155 (256)
T ss_pred             CEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHH
Confidence            999999998   6677888899999999999999999999999999998764 4799999999999999999999864

>PLN02253 xanthoxin dehydrogenase

Probab=99.96  E-value=2.7e-28  Score=183.99  Aligned_cols=156  Identities=21%  Similarity=0.248  Sum_probs=136.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++|||++++||++++++|+++|++|++++|+++..+++.+.+.  .+.++.++.+|++|+++++++++.+. ++
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--GEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc--CCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999998777766666553  24578999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||... ....++.+.+.++|+.++++|+.+++.+++.+.|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        93 g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  171 (280)
T PLN02253         93 GTLDIMVNNAGLTG-PPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGS  171 (280)
T ss_pred             CCCCEEEECCCcCC-CCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHH
Confidence            99999999999711 12246778899999999999999999999999999988777999999999999888888889875

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-28  Score=181.09  Aligned_cols=155  Identities=21%  Similarity=0.286  Sum_probs=140.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++|||++++||.+++++|+++|++|++++|+++.+++..+.+.. .+.++.++.+|++++++++++++++. .+
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE-AGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35689999999999999999999999999999999998888888777766 66789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||+|.   .. ..++.+.+.++|+..+++|+.+++.+++.++|.|.+++.+++|++||..+..+.+++..|++
T Consensus        83 g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  159 (253)
T PRK06172         83 GRLDYAFNNAGI---EIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAA  159 (253)
T ss_pred             CCCCEEEECCCC---CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHH
Confidence            999999999997   33 34577889999999999999999999999999998877789999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       160 s  160 (253)
T PRK06172        160 S  160 (253)
T ss_pred             H
Confidence            4

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.8e-28  Score=184.64  Aligned_cols=152  Identities=18%  Similarity=0.179  Sum_probs=127.8

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++|||++  +|||+++|++|+++|++|++++|++.. .+..+.+....+ ....+.+|++|+++++++++++. 
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHH
Confidence            3578999999997  899999999999999999998886432 222333332133 35578999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +++++|++|||||+   ..    ..++.+.+.++|++.+++|+.+++.+++.++|.|.+  .|+||++||..+..+.|++
T Consensus        85 ~~g~iD~lv~nAG~---~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~  159 (272)
T PRK08159         85 KWGKLDFVVHAIGF---SDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHY  159 (272)
T ss_pred             hcCCCcEEEECCcc---cCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcc
Confidence            89999999999998   33    256778999999999999999999999999999964  4899999999988889999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       160 ~~Y~as  165 (272)
T PRK08159        160 NVMGVA  165 (272)
T ss_pred             hhhhhH
Confidence            999875

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-28  Score=182.74  Aligned_cols=151  Identities=21%  Similarity=0.317  Sum_probs=133.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +++++|||++++||++++++|+++|++|++++|+++.++++.+.+.. .+ ++.++.+|++++++++++++++. +.+++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK-AA-RVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc-CC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999999999998887777666643 33 78999999999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCC-CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNF-TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||+|.   ...... .+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        80 d~lv~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as  154 (257)
T PRK07024         80 DVVIANAGI---SVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSAS  154 (257)
T ss_pred             CEEEECCCc---CCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHH
Confidence            999999998   333333 33788999999999999999999999999988888999999999999999999999864

>PRK05599 hypothetical protein; Provisional

Probab=99.96  E-value=2.3e-28  Score=181.51  Aligned_cols=151  Identities=13%  Similarity=0.075  Sum_probs=133.5

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~   91 (167)
                      ++++|||+++|||++++++|+ +|++|++++|++++++++.+.++...+.++.++.+|++|+++++++++++. .++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999 599999999999999988888876223358899999999999999999998 889999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||+|.   ....+..+.+.+++.+.+++|+.+++.+.+.++|.|.+++ +|+||++||.++..+.+++..|++|
T Consensus        80 ~lv~nag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  153 (246)
T PRK05599         80 LAVVAFGI---LGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGST  153 (246)
T ss_pred             EEEEecCc---CCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhH
Confidence            99999998   4444555677788899999999999999999999998764 6899999999999999999999875

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.3e-28  Score=182.06  Aligned_cols=149  Identities=20%  Similarity=0.242  Sum_probs=132.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||+++|||++++++|+++|++|++++|+.+.++++.+.+    +.++.++.+|++++++++++++++. +++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999987766665543    4578899999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....+. +.+.++|++.+++|+.+++.+++.+.|.|. ++.|+||++||..+..+.+++..|++|
T Consensus        80 ~id~lv~~ag~---~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~as  153 (261)
T PRK08265         80 RVDILVNLACT---YLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPAS  153 (261)
T ss_pred             CCCEEEECCCC---CCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHH
Confidence            99999999997   443333 568899999999999999999999999997 556899999999999999999999875

>PRK05717 oxidoreductase; Validated

Probab=99.96  E-value=4.2e-28  Score=180.70  Aligned_cols=154  Identities=20%  Similarity=0.288  Sum_probs=134.9

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +..++++|+++|||++++||++++++|+++|++|++++|+.++.++..+.    .+.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKA----LGENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH----cCCceEEEEccCCCHHHHHHHHHHHH
Confidence            45667899999999999999999999999999999999887665554433    34578899999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCC--CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQ--PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                       +++++|++|||||.   ..  ..++.+.+.++|+..+++|+.+++.+++.+.|.|.++ .|+||++||..+..+.+++.
T Consensus        80 ~~~g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~  155 (255)
T PRK05717         80 GQFGRLDALVCNAAI---ADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTE  155 (255)
T ss_pred             HHhCCCCEEEECCCc---ccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCc
Confidence             88999999999998   32  2567788999999999999999999999999999775 48999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       156 ~Y~~s  160 (255)
T PRK05717        156 AYAAS  160 (255)
T ss_pred             chHHH
Confidence            99875

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6e-28  Score=180.75  Aligned_cols=155  Identities=20%  Similarity=0.271  Sum_probs=140.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++|||++++||++++++|+++|++|++++|+++..+++.+.+.. .+.++.++.+|++++++++++++++. .+
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA-AGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998888887777765 56678999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh-cCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE-RGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++||+||.   ....++.+.+.++++..+++|+.+++.+.+.+.+.|.+ ++.|+||++||..+..+.+++..|++
T Consensus        86 ~~id~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  162 (263)
T PRK07814         86 GRLDIVVNNVGG---TMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGT  162 (263)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHH
Confidence            999999999998   55667788899999999999999999999999999987 45689999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       163 s  163 (263)
T PRK07814        163 A  163 (263)
T ss_pred             H
Confidence            5

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.5e-28  Score=179.64  Aligned_cols=153  Identities=24%  Similarity=0.381  Sum_probs=137.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++||||+++||++++++|+++|++|++++|+++.++++.+.+.. .+.++.++.+|++++++++++++++. +++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD-LGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-hCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999998888777777765 56678999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   .. ..++.+.+.++|++.+++|+.+++.+++.+.+.|.+++ ++||++||..+..+.+++..|++|
T Consensus        82 ~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~s  157 (258)
T PRK07890         82 RVDALVNNAFR---VPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMA  157 (258)
T ss_pred             CccEEEECCcc---CCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHH
Confidence            99999999997   43 35777889999999999999999999999999997754 799999999999999999999864

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.96  E-value=9e-28  Score=178.94  Aligned_cols=156  Identities=25%  Similarity=0.339  Sum_probs=139.2

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ++.+++|+++|||++++||++++++|+++|++|++++|+.+..+++.+.++. .+.++.++.+|+++++++++++..+. 
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3456799999999999999999999999999999999988888777777765 56688899999999999999999988 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      .++++|++|||+|.   ....++ +.+.++|++.+++|+.+++.+++.+.|.|.+.+.|+||++||..+..+.+++..|+
T Consensus        85 ~~~~~d~li~~ag~---~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  160 (255)
T PRK06113         85 KLGKVDILVNNAGG---GGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_pred             HcCCCCEEEECCCC---CCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhH
Confidence            88999999999998   444454 67889999999999999999999999999877778999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       161 ~s  162 (255)
T PRK06113        161 SS  162 (255)
T ss_pred             HH
Confidence            64

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.5e-28  Score=183.05  Aligned_cols=156  Identities=24%  Similarity=0.322  Sum_probs=136.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+.+.. .+.++.++.+|++|+++++++++++. +
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999888888877765 56678899999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCC--CHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc-CCCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEI--SFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN-GIAGFSE  163 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~  163 (167)
                      ++++|++|||||.   ....++.+.  +.++++..+++|+.+++.+++.++|.|.+++.|+||++||..+.. +.+++..
T Consensus       115 ~g~id~li~~AG~---~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~  191 (293)
T PRK05866        115 IGGVDILINNAGR---SIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSV  191 (293)
T ss_pred             cCCCCEEEECCCC---CCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcch
Confidence            8999999999998   555555443  468899999999999999999999999988889999999976654 3677888


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       192 Y~as  195 (293)
T PRK05866        192 YNAS  195 (293)
T ss_pred             HHHH
Confidence            8864

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.96  E-value=2e-28  Score=186.49  Aligned_cols=156  Identities=21%  Similarity=0.187  Sum_probs=128.9

Q ss_pred             CCCCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh--------c-C---CcEEEEEeec--
Q 031016            8 GSSCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--------E-K---SQVFAIRIDC--   71 (167)
Q Consensus         8 ~~~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--------~-~---~~~~~~~~D~--   71 (167)
                      +.+++|+++|||+  ++|||+++|+.|+++|++|++ +|+.+++++....+...        . +   .....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4578999999999  899999999999999999988 78777777766555420        1 1   1146788898  


Q ss_pred             CC------------------HHHHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHH
Q 031016           72 SD------------------SRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ  132 (167)
Q Consensus        72 ~~------------------~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  132 (167)
                      ++                  +++++++++++. ++|++|++|||||.. .....++.+.+.++|++.+++|+++++.++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~-~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANG-PEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcc-ccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            43                  348999999998 899999999999861 0124688899999999999999999999999


Q ss_pred             HHHHhhHhcCCceEEEecCCccccCCCCc-cccccC
Q 031016          133 QVLSGMVERGKGTIIFTGCSASLNGIAGF-SELCKN  167 (167)
Q Consensus       133 ~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~as  167 (167)
                      .++|.|.++  |+||++||..+..+.|++ ..|++|
T Consensus       163 ~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~as  196 (303)
T PLN02730        163 HFGPIMNPG--GASISLTYIASERIIPGYGGGMSSA  196 (303)
T ss_pred             HHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHH
Confidence            999999764  899999999999888865 579875

>PRK07985 oxidoreductase; Provisional

Probab=99.96  E-value=7.4e-28  Score=183.16  Aligned_cols=154  Identities=19%  Similarity=0.223  Sum_probs=133.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++||||++|||++++++|+++|++|++.+|+.  +..+++.+.+.. .+.++.++.+|++++++++++++++. 
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-CGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999887653  345555555544 56678899999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      .++++|++|||||.  .....++.+.+.++|++.+++|+.+++.+++.+.|.|.+  .|+||++||..+..+.+++.+|+
T Consensus       125 ~~g~id~lv~~Ag~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~  200 (294)
T PRK07985        125 ALGGLDIMALVAGK--QVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_pred             HhCCCCEEEECCCC--CcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhH
Confidence            88999999999997  123457888999999999999999999999999999965  37999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       201 as  202 (294)
T PRK07985        201 AT  202 (294)
T ss_pred             HH
Confidence            74

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=1e-27  Score=179.20  Aligned_cols=154  Identities=23%  Similarity=0.305  Sum_probs=137.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||+++||+++|++|+++|++|++.+|+ .+...++.+.++. .+.++.++.+|++|+++++++++.+. ++
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999999988885 4455666667765 56788899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||+|.   ..+.++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .|+||++||..+..+.+++.+|++
T Consensus        84 g~id~lv~~ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         84 GTLDVMINNAGI---ENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            999999999998   6667788899999999999999999999999999998865 589999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       161 s  161 (261)
T PRK08936        161 S  161 (261)
T ss_pred             H
Confidence            4

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=6.8e-28  Score=178.79  Aligned_cols=153  Identities=23%  Similarity=0.366  Sum_probs=138.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEE-EecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      .+++++||||+++||++++++|+++|++|++ ..|+.++.+++.+.++. .+.++.++.+|++++++++++++++. .++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA-LGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999876 47888777777777766 67789999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++++.+.|.+++.|+||++||..+..+.+++..|++|
T Consensus        82 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  157 (250)
T PRK08063         82 RLDVFVNNAAS---GVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVS  157 (250)
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHH
Confidence            99999999998   66778889999999999999999999999999999998888999999999888888888888764

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=185.78  Aligned_cols=144  Identities=19%  Similarity=0.211  Sum_probs=126.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ++++|+++||||++|||++++++|+++|++|++.+|+.++.++..+++.... +.++.++.+|+++.++++++++++. +
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999999988888877776532 3478999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      .+++|++|||||.   ... +..+.+.++++..+++|+.+++.+++.++|.|.+. .++||++||..+..+
T Consensus        91 ~~~iD~li~nAG~---~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~  156 (313)
T PRK05854         91 GRPIHLLINNAGV---MTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRG  156 (313)
T ss_pred             CCCccEEEECCcc---ccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCC
Confidence            8999999999998   332 34457789999999999999999999999999765 589999999887654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.96  E-value=7e-28  Score=178.63  Aligned_cols=153  Identities=19%  Similarity=0.283  Sum_probs=134.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++|||++++||.+++++|+++|++|++++|+..  ++..+.+.. .+.++.++.+|++++++++++++++. .+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999998652  344444544 55678999999999999999999988 78


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        79 ~~~d~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  155 (248)
T TIGR01832        79 GHIDILVNNAGI---IRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTA  155 (248)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHH
Confidence            899999999998   6667778889999999999999999999999999998765 689999999999888888888886


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       156 s  156 (248)
T TIGR01832       156 S  156 (248)
T ss_pred             H
Confidence            4

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.3e-28  Score=181.94  Aligned_cols=150  Identities=21%  Similarity=0.308  Sum_probs=135.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++|||++|+||++++++|+++|++|++++|+++.++++.+.    .+.++..+.+|++|+++++++++++. .+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----HPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----cCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999988766554332    34578889999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||||.   ...+++.+.+.++|++.+++|+.+++.+.+.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        79 ~d~vv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~s  153 (277)
T PRK06180         79 IDVLVNNAGY---GHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGS  153 (277)
T ss_pred             CCEEEECCCc---cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHH
Confidence            9999999998   66778889999999999999999999999999999998877899999999999999999999864

>PRK05855 short chain dehydrogenase; Validated

Probab=99.96  E-value=4.8e-28  Score=198.38  Aligned_cols=155  Identities=23%  Similarity=0.297  Sum_probs=142.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+++++||||++|||++++++|+++|++|++++|+.+.++++.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRA-AGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999999999999999888888887766 56789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   ...+++.+.+.++|+.++++|+.+++.+++.++|.|.+++ .|+||++||.++..+.+++..|++
T Consensus       391 g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  467 (582)
T PRK05855        391 GVPDIVVNNAGI---GMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYAT  467 (582)
T ss_pred             CCCcEEEECCcc---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHH
Confidence            999999999999   6677888999999999999999999999999999999876 489999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       468 s  468 (582)
T PRK05855        468 S  468 (582)
T ss_pred             H
Confidence            5

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=8.9e-28  Score=183.65  Aligned_cols=156  Identities=23%  Similarity=0.246  Sum_probs=136.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .++++|+++|||+++|||++++++|+++|++|++.++. ....++..+.+.. .+.++.++.+|++++++++++++.+.+
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999998875 3456677777765 677899999999999999999988766


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-------CceEEEecCCccccCCC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-------KGTIIFTGCSASLNGIA  159 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~iss~~~~~~~~  159 (167)
                      ++++|++|||||.   ....++.+.+.++|+..+++|+.+++++++.+.++|.++.       .|+||++||..+..+.+
T Consensus        87 ~g~iD~li~nAG~---~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (306)
T PRK07792         87 LGGLDIVVNNAGI---TRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV  163 (306)
T ss_pred             hCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC
Confidence            7899999999998   6667788899999999999999999999999999997541       37999999999999989


Q ss_pred             CccccccC
Q 031016          160 GFSELCKN  167 (167)
Q Consensus       160 ~~~~y~as  167 (167)
                      ++..|++|
T Consensus       164 ~~~~Y~as  171 (306)
T PRK07792        164 GQANYGAA  171 (306)
T ss_pred             CCchHHHH
Confidence            99999874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=5.3e-28  Score=180.96  Aligned_cols=151  Identities=15%  Similarity=0.123  Sum_probs=123.2

Q ss_pred             CCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||  ++|||+++|++|+++|++|++++|.....+++ +.+....+. ...+.+|++|+++++++++++. +
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRI-TEFAAEFGS-DLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHH-HHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHH
Confidence            45899999996  67999999999999999999886542222222 222221332 3468899999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCC----C-CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPT----N-FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++++|++|||||.   ....    + +++.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+..+.+++
T Consensus        82 ~g~iD~lvnnAG~---~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~  156 (260)
T PRK06997         82 WDGLDGLVHSIGF---APREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNY  156 (260)
T ss_pred             hCCCcEEEEcccc---CCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCc
Confidence            8999999999998   3321    2 456888999999999999999999999999953  4899999999999899999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       157 ~~Y~as  162 (260)
T PRK06997        157 NTMGLA  162 (260)
T ss_pred             chHHHH
Confidence            999875

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.3e-28  Score=178.49  Aligned_cols=151  Identities=21%  Similarity=0.282  Sum_probs=131.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h--
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S--   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~--   86 (167)
                      ++|+++|||+++|||++++++|+++|++|++.. ++.+..++....+.. .+.++..+.+|+++.++++++++++. .  
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            579999999999999999999999999998875 566667777777765 56678889999999999998888775 3  


Q ss_pred             --cC--CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           87 --LG--FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        87 --~~--~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                        ++  ++|++|||||.   ....++.+.+.++|++++++|+.+++.++++++|.|.++  |+||++||..+..+.+++.
T Consensus        82 ~~~g~~~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~  156 (252)
T PRK12747         82 NRTGSTKFDILINNAGI---GPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFI  156 (252)
T ss_pred             hhcCCCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCCch
Confidence              23  89999999998   566778889999999999999999999999999999763  7999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      +|++|
T Consensus       157 ~Y~~s  161 (252)
T PRK12747        157 AYSMT  161 (252)
T ss_pred             hHHHH
Confidence            99875

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.2e-28  Score=180.31  Aligned_cols=151  Identities=22%  Similarity=0.246  Sum_probs=139.4

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~   91 (167)
                      ++++||||+++||++++++|+++|++|++++|+.+.+++..+.+.. .+.++.++.+|++++++++++++++. +++++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE-AGGDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999999999998888888887776 56789999999999999999999998 889999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||+|.   ...+++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++|
T Consensus        80 ~lI~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  152 (270)
T PRK05650         80 VIVNNAGV---ASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVA  152 (270)
T ss_pred             EEEECCCC---CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHH
Confidence            99999998   67778889999999999999999999999999999988877899999999999999999999864

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-27  Score=178.34  Aligned_cols=155  Identities=23%  Similarity=0.301  Sum_probs=139.1

Q ss_pred             CCCcEEEEEcCCC-chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGP-NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~-~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+|+++|||++| |||+++++.|+++|++|++++|+.+++++..+.++...+ .++.++.+|++++++++++++++. +
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999985 999999999999999999999998888877777755233 468899999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+++..|+
T Consensus        95 ~g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~  171 (262)
T PRK07831         95 LGRLDVLVNNAGL---GGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYA  171 (262)
T ss_pred             cCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchH
Confidence            8999999999998   5667888999999999999999999999999999998876 78999999999998988999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       172 ~s  173 (262)
T PRK07831        172 AA  173 (262)
T ss_pred             HH
Confidence            75

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.96  E-value=1.1e-27  Score=177.40  Aligned_cols=153  Identities=24%  Similarity=0.328  Sum_probs=135.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++|||++++||++++++|+++|++|++. .++.....+..+.++. .+.++..+.+|++|+++++++++++. .++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA-LGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            57999999999999999999999999998885 4455555566666655 56678889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        81 ~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~s  156 (246)
T PRK12938         81 EIDVLVNNAGI---TRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTA  156 (246)
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHH
Confidence            99999999998   56667888999999999999999999999999999988777899999999999898998888764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-27  Score=177.69  Aligned_cols=153  Identities=27%  Similarity=0.422  Sum_probs=137.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      +|+++|||++++||.+++++|+++|++|++++|+.+..++..+.+....+ .++.++.+|++++++++++++++. .+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998877777776654233 478999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ....++.+.+.++|+..+++|+.+++.+.+.+.+.|.+++ .++||++||..+..+.+...+|++|
T Consensus        82 id~vv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  157 (259)
T PRK12384         82 VDLLVYNAGI---AKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAA  157 (259)
T ss_pred             CCEEEECCCc---CCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHH
Confidence            9999999998   6667888899999999999999999999999999998876 6899999999988888888889875

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=177.35  Aligned_cols=153  Identities=20%  Similarity=0.295  Sum_probs=131.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|++. .++..+.+.. .+.++.++.+|++++++++++++++. ++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRA-AGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999999753 4455556654 56678899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.  .....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+.  .++..+|++|
T Consensus        83 ~~id~lv~nAg~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~s  158 (260)
T PRK12823         83 GRIDVLINNVGG--TIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAA  158 (260)
T ss_pred             CCCeEEEECCcc--ccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHH
Confidence            999999999996  123567888999999999999999999999999999998877899999998764  2345678764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.96  E-value=8.4e-28  Score=178.79  Aligned_cols=153  Identities=18%  Similarity=0.227  Sum_probs=137.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +..+|.|+|||+.+|+|+.+|++|.++|++|++-+-.++..+.+..+.+   ..+...+..|+|++++++++.+.++ ..
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999999999988888887777663   5688899999999999999999887 43


Q ss_pred             --CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           88 --GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        88 --~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                        ..+.++|||||+  ....++.+=.+.+++...+++|+.|++.+++.|+|.+++. +|||||+||+.|..+.|..++||
T Consensus       103 ~~~gLwglVNNAGi--~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~  179 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGI--SGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYC  179 (322)
T ss_pred             ccccceeEEecccc--ccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccch
Confidence              469999999997  2467888889999999999999999999999999999876 59999999999999999999999


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       180 ~S  181 (322)
T KOG1610|consen  180 VS  181 (322)
T ss_pred             hh
Confidence            87

>PRK12743 oxidoreductase; Provisional

Probab=99.96  E-value=1.8e-27  Score=177.52  Aligned_cols=152  Identities=25%  Similarity=0.380  Sum_probs=135.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      +|+++||||+++||++++++|+++|++|+++.+ +.+..+++.+.++. .+.++.++.+|++++++++++++++. ++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999988854 55666777777766 67789999999999999999999999 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ....++.+.+.++|++.+++|+.+++.+.+.+.+.|.+++ .|+||++||..+..+.+++..|+++
T Consensus        81 id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  156 (256)
T PRK12743         81 IDVLVNNAGA---MTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAA  156 (256)
T ss_pred             CCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHH
Confidence            9999999998   5556778889999999999999999999999999997754 5899999999999999999999864

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=176.36  Aligned_cols=154  Identities=26%  Similarity=0.334  Sum_probs=138.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++|||++++||++++++|+++|++|++++|+.+..++..+.+.  .+.++.++.+|++|+++++++++++. ++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999999999999877776666654  35678999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||+|.   ....++.+.+.++++..+++|+.+++.+.+.+++.|++++.++||++||..+..+.+++..|++|
T Consensus        80 ~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  156 (252)
T PRK06138         80 GRLDVLVNNAGF---GCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVAS  156 (252)
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHH
Confidence            999999999998   66677788899999999999999999999999999998878899999999999888888888764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.96  E-value=8.6e-28  Score=179.75  Aligned_cols=151  Identities=23%  Similarity=0.370  Sum_probs=129.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.    .+.++..+.+|+++.++++++++++. ++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----HGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            35689999999999999999999999999999999988766655432    35578899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCC-CCCCCCCCH----HHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           88 GFVEVLVYNAYQPVSWQ-PTNFTEISF----DSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~-~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      +++|++|||||.   .. ..++.+.+.    ++|++.+++|+.+++.+++.++|.|.+++ |++|+++|..+..+.+++.
T Consensus        78 g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~  153 (262)
T TIGR03325        78 GKIDCLIPNAGI---WDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGP  153 (262)
T ss_pred             CCCCEEEECCCC---CccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCc
Confidence            999999999997   32 234444443    57999999999999999999999997754 8999999999999988888


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       154 ~Y~~s  158 (262)
T TIGR03325       154 LYTAA  158 (262)
T ss_pred             hhHHH
Confidence            99875

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=176.31  Aligned_cols=153  Identities=27%  Similarity=0.418  Sum_probs=139.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++|||++++||+.++++|+++|++|++++|+++..+++.+.++. .+.++.++.+|+++++++.++++.+. ++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS-TGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999998887777777765 56688999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ....++.+.+.++++..+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|++|
T Consensus        84 id~lv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  158 (241)
T PRK07454         84 PDVLINNAGM---AYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVS  158 (241)
T ss_pred             CCEEEECCCc---cCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHH
Confidence            9999999998   66677888899999999999999999999999999988877899999999998888888888753

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-27  Score=177.08  Aligned_cols=147  Identities=22%  Similarity=0.232  Sum_probs=131.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.        .. .+.++.++.+|++++++++++++.+. .+
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TV-DGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hh-cCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999998654        11 34578899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   .+..++.+.+.++|++.+++|+.+++.+++.+.+.|.++ ..|+||++||..+..+.+++..|++
T Consensus        74 ~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~  150 (252)
T PRK07856         74 GRLDVLVNNAGG---SPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGA  150 (252)
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHH
Confidence            999999999998   666778889999999999999999999999999999875 3589999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       151 s  151 (252)
T PRK07856        151 A  151 (252)
T ss_pred             H
Confidence            4

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-27  Score=179.01  Aligned_cols=150  Identities=21%  Similarity=0.252  Sum_probs=135.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .+|+++||||+++||++++++|+++|++|++++|+++.++++.+.    .+.++.++.+|++++++++++++.+. .+++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK----YGDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----ccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999998776655443    34568889999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ...+++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+++..|++|
T Consensus        78 ~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  152 (275)
T PRK08263         78 LDIVVNNAGY---GLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHAS  152 (275)
T ss_pred             CCEEEECCCC---ccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHH
Confidence            9999999998   67788889999999999999999999999999999988877899999999999999999889864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-27  Score=176.23  Aligned_cols=154  Identities=24%  Similarity=0.332  Sum_probs=141.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||++++||++++++|+++|++|++++|+++..++..+.++. .+.++.++.+|++++++++++++++. .++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK-AGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999998888887777766 66789999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|+|+|.   ....+..+.+.++++..+++|+.+++.+++.+++.|.+++.++||++||..+..+.+++..|+++
T Consensus        81 ~~d~vi~~a~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~  156 (258)
T PRK12429         81 GVDILVNNAGI---QHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSA  156 (258)
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHH
Confidence            99999999998   66677888899999999999999999999999999998888899999999999999999998764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3e-27  Score=176.21  Aligned_cols=155  Identities=19%  Similarity=0.219  Sum_probs=134.8

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecC-----------hhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARD-----------LGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      ++++|+++||||+  +|||.+++++|+++|++|++++|+           ......+.+.+.. .+.++.++.+|+++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence            4578999999999  499999999999999999999887           2222224444544 5667999999999999


Q ss_pred             HHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           76 SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        76 ~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +++++++++. +++++|++|||||.   ....++.+.+.++++..+++|+.+++.+.+.+.+.|.+++.++||++||..+
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~  157 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAY---STHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS  157 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc
Confidence            9999999998 88999999999998   6677888899999999999999999999999999998777789999999999


Q ss_pred             ccCCCCccccccC
Q 031016          155 LNGIAGFSELCKN  167 (167)
Q Consensus       155 ~~~~~~~~~y~as  167 (167)
                      ..+.+++..|++|
T Consensus       158 ~~~~~~~~~Y~~s  170 (256)
T PRK12748        158 LGPMPDELAYAAT  170 (256)
T ss_pred             cCCCCCchHHHHH
Confidence            8888888999875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-27  Score=176.77  Aligned_cols=151  Identities=26%  Similarity=0.381  Sum_probs=135.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++|||++++||++++++|+++|++|++++|+.+..+++.+.+    +.++.++.+|++++++++++++++. +++
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----GPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999988777665543    3468889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.+.+.|.+++ .|+||++||..+..+.+++..|++|
T Consensus        80 ~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  156 (257)
T PRK07067         80 GIDILFNNAAL---FDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCAT  156 (257)
T ss_pred             CCCEEEECCCc---CCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhh
Confidence            99999999998   5667888899999999999999999999999999997764 4799999999999999999999875

>TIGR02415 23BDH acetoin reductases

Probab=99.96  E-value=3e-27  Score=175.71  Aligned_cols=151  Identities=24%  Similarity=0.324  Sum_probs=138.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~   91 (167)
                      |+++|||++++||++++++|+++|++|++++|+++.++++.+.+.. .+.++.++.+|++++++++++++++. +++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ-AGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999998888877777766 66789999999999999999999998 889999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||+|.   ...+++.+.+.++|++.+++|+.+++.+++.+++.|++++ .++||++||..+..+.+++..|++|
T Consensus        80 ~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  153 (254)
T TIGR02415        80 VMVNNAGV---APITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSST  153 (254)
T ss_pred             EEEECCCc---CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHH
Confidence            99999998   6777888999999999999999999999999999998865 4899999999999999999999864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2e-27  Score=177.10  Aligned_cols=150  Identities=27%  Similarity=0.329  Sum_probs=128.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++|||+++|||+++|++|+++|++|++++++.+..   .+.+.. .  .+.++.+|++|+++++++++++. ++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~-~--~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE-K--GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh-C--CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999998887654322   223322 2  47789999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc-CCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN-GIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~y~a  166 (167)
                      +++|++|||+|.   ....++.+.+.++|++++++|+.+++++++.++|.|.+++.|+||++||..+.. +.+++..|++
T Consensus        78 ~~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  154 (255)
T PRK06463         78 GRVDVLVNNAGI---MYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAI  154 (255)
T ss_pred             CCCCEEEECCCc---CCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHH
Confidence            999999999998   566788889999999999999999999999999999877789999999998874 4567788987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       155 s  155 (255)
T PRK06463        155 T  155 (255)
T ss_pred             H
Confidence            5

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=4.3e-27  Score=173.58  Aligned_cols=154  Identities=30%  Similarity=0.403  Sum_probs=139.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+++++|||++++||++++++|+++|++|++++|+++..++..+.+.. .+.++.++.+|++++++++++++++. +++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEEVTAAIEQLKNELG   83 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999999999998888777777765 56689999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ...+++.+.+.++|+..+++|+.+++.+.+.+.+.+.+++.+++|++||..+..+.+++..|++|
T Consensus        84 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  159 (239)
T PRK07666         84 SIDILINNAGI---SKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSAS  159 (239)
T ss_pred             CccEEEEcCcc---ccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHH
Confidence            99999999998   56667778899999999999999999999999999988878899999999999998888888764

>PRK06128 oxidoreductase; Provisional

Probab=99.96  E-value=2.3e-27  Score=180.82  Aligned_cols=153  Identities=20%  Similarity=0.241  Sum_probs=133.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh--hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG--RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++|||+++|||++++++|+++|++|++.+++.+  ..++..+.++. .+.++.++.+|++++++++++++++. .
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            56799999999999999999999999999988876543  34556666665 56788999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.  .....++.+.+.++|+..+++|+.+++.+++.++|.|.+  .++||++||..+..+.+++..|++
T Consensus       132 ~g~iD~lV~nAg~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~a  207 (300)
T PRK06128        132 LGGLDILVNIAGK--QTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAS  207 (300)
T ss_pred             hCCCCEEEECCcc--cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHH
Confidence            8999999999997  123457888999999999999999999999999999865  379999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       208 s  208 (300)
T PRK06128        208 T  208 (300)
T ss_pred             H
Confidence            4

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-27  Score=176.27  Aligned_cols=154  Identities=25%  Similarity=0.343  Sum_probs=139.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||++++||++++++|+++|++|++++|+++..++..+.++. .+.++.++.+|++++++++++++++. .++
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK-AGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh-cCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999999999999999888888888766 66788999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhh-HhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGM-VERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.+++.+ ++.+.++||++||..+..+.++...|++|
T Consensus        84 ~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s  160 (262)
T PRK13394         84 SVDILVSNAGI---QIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA  160 (262)
T ss_pred             CCCEEEECCcc---CCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            99999999998   666777888899999999999999999999999999 66667899999999988888888888764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-27  Score=178.20  Aligned_cols=151  Identities=23%  Similarity=0.273  Sum_probs=131.5

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      |...+.+++|+++|||+++|||++++++|+++|++|+++++++...          ...++.++.+|+++++++++++++
T Consensus         1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG----------QHENYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCceEEEEccCCCHHHHHHHHHH
Confidence            3444567899999999999999999999999999999999876542          123678899999999999999999


Q ss_pred             HH-hcCCccEEEEcCCCCCCCCCC---------CCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQPT---------NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +. +++++|++|||||.   ....         +..+.+.++|++.+++|+.+++.+++.+.+.|.+++.|+||++||..
T Consensus        71 ~~~~~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~  147 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGI---NIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEA  147 (266)
T ss_pred             HHHHcCCCCEEEECCcc---cCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccc
Confidence            98 88999999999997   3222         23467899999999999999999999999999988789999999999


Q ss_pred             cccCCCCccccccC
Q 031016          154 SLNGIAGFSELCKN  167 (167)
Q Consensus       154 ~~~~~~~~~~y~as  167 (167)
                      +..+.+++..|++|
T Consensus       148 ~~~~~~~~~~Y~~s  161 (266)
T PRK06171        148 GLEGSEGQSCYAAT  161 (266)
T ss_pred             ccCCCCCCchhHHH
Confidence            99999999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.96  E-value=3.6e-27  Score=174.68  Aligned_cols=154  Identities=21%  Similarity=0.314  Sum_probs=137.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +.+|+++|||++++||.+++++|+++|++|++.. |+++..++..+.++. .+.++.++.+|++++++++++++++. ++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-EGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3589999999999999999999999999998765 455666677677765 56689999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||+|.   ....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++|
T Consensus        83 ~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  159 (247)
T PRK12935         83 GKVDILVNNAGI---TRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAA  159 (247)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHH
Confidence            999999999998   66667788899999999999999999999999999988777899999999999888899999874

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.6e-27  Score=176.44  Aligned_cols=154  Identities=13%  Similarity=0.221  Sum_probs=138.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++++++||||+++||++++++|+++|++|++++|+++.+++...++ . .+.++.++.+|++|+++++++++.+.+++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-YPGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-cCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            356899999999999999999999999999999999988887777666 3 45689999999999999999988876668


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++++..+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+++..|++|
T Consensus        80 ~id~lv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  155 (263)
T PRK09072         80 GINVLINNAGV---NHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCAS  155 (263)
T ss_pred             CCCEEEECCCC---CCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHH
Confidence            99999999998   56677888999999999999999999999999999998877899999999999998988888764

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.96  E-value=1.5e-27  Score=183.43  Aligned_cols=153  Identities=24%  Similarity=0.314  Sum_probs=127.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCC--HHHHHHHHHHHHhc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSD--SRSVREAFEGVLSL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~--~~~~~~~~~~~~~~   87 (167)
                      .+++++||||++|||+++|++|+++|++|++++|++++++++.++++... +.++..+.+|+++  .+.++++.+.+. .
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~-~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE-G  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc-C
Confidence            58999999999999999999999999999999999999998888886533 3578889999985  334444443331 1


Q ss_pred             CCccEEEEcCCCCCCCC--CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc-C-CCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQ--PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN-G-IAGFSE  163 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~-~~~~~~  163 (167)
                      .++|++|||||.   ..  ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||.++.. + .|+++.
T Consensus       131 ~didilVnnAG~---~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~  207 (320)
T PLN02780        131 LDVGVLINNVGV---SYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAV  207 (320)
T ss_pred             CCccEEEEecCc---CCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchH
Confidence            257799999998   33  2467888999999999999999999999999999988889999999999864 4 588899


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       208 Y~aS  211 (320)
T PLN02780        208 YAAT  211 (320)
T ss_pred             HHHH
Confidence            9875

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=3.3e-27  Score=181.09  Aligned_cols=141  Identities=22%  Similarity=0.299  Sum_probs=123.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++|||+++|||++++++|+++| ++|++++|+.++.+++.+.+.. .+.++.++.+|+++.++++++++++. .++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            37899999999999999999999999 9999999998888877777654 45678889999999999999999998 788


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccc
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASL  155 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~  155 (167)
                      ++|++|||||+   .. ..+..+.+.++|+.++++|+.+++.+++.++|.|.+++  .|+||++||..+.
T Consensus        81 ~iD~lI~nAG~---~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289        81 PLDALVCNAAV---YFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             CCCEEEECCCc---cccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence            99999999997   33 23345678899999999999999999999999998764  4899999998764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-27  Score=176.98  Aligned_cols=151  Identities=17%  Similarity=0.279  Sum_probs=132.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~   92 (167)
                      +++|||+++|||++++++|+++|++|++++|+++.+++..+.++. .+ ++.++.+|++|+++++++++++. +++++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE-YG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            589999999999999999999999999999999888888887765 33 68889999999999999999998 8899999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh-cCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE-RGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|||||... ....++.+.+.++|.+.+++|+.+++.+.+.++|.|.+ ++.|+||++||..+..+.+++..|++|
T Consensus        80 li~naG~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  154 (259)
T PRK08340         80 LVWNAGNVR-CEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVT  154 (259)
T ss_pred             EEECCCCCC-CCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHH
Confidence            999999721 12345778889999999999999999999999999874 457899999999999898988889764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-27  Score=176.47  Aligned_cols=153  Identities=20%  Similarity=0.295  Sum_probs=134.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||+++||++++++|+++|++|++++|+++.. +..+.++. .+.++.++.+|++++++++++++++. .
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            346799999999999999999999999999999999988766 66666655 56689999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....+++..+ ++|+..+++|+.+++.+.+.+.|.+++. .|+||++||..+..+.+++..|++
T Consensus        81 ~~~id~vi~~ag~---~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~  155 (258)
T PRK08628         81 FGRIDGLVNNAGV---NDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAA  155 (258)
T ss_pred             cCCCCEEEECCcc---cCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHH
Confidence            8999999999997   4445555555 9999999999999999999999998764 489999999999999899999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       156 s  156 (258)
T PRK08628        156 A  156 (258)
T ss_pred             H
Confidence            4

>PRK06182 short chain dehydrogenase; Validated

Probab=99.96  E-value=2.5e-27  Score=178.23  Aligned_cols=147  Identities=23%  Similarity=0.312  Sum_probs=131.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .+|+++|||++++||++++++|+++|++|++++|+.++++++.    .   ..+.++.+|++|+++++++++++. .+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S---LGVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h---CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999999887655432    1   247889999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ...+++.+.+.++|+..+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|++|
T Consensus        75 id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  149 (273)
T PRK06182         75 IDVLVNNAGY---GSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHAT  149 (273)
T ss_pred             CCEEEECCCc---CCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHH
Confidence            9999999998   67778889999999999999999999999999999998878899999999988888887788764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-27  Score=177.36  Aligned_cols=150  Identities=23%  Similarity=0.380  Sum_probs=130.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||+++|||++++++|+++|++|++++|+++.++++.+.    .+.++.++.+|++++++++++++++. +++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQR----FGDHVLVVEGDVTSYADNQRAVDQTVDAFG   79 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999998777665544    34468889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHH----HHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDS----FQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                      ++|++|||||+   .. ..++.+.+.++    |++++++|+.+++.+++.++|.|.++ .|+||++||..+..+.++...
T Consensus        80 ~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~  155 (263)
T PRK06200         80 KLDCFVGNAGI---WDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPL  155 (263)
T ss_pred             CCCEEEECCCC---cccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCch
Confidence            99999999997   33 34566666665    89999999999999999999998765 489999999999999888888


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       156 Y~~s  159 (263)
T PRK06200        156 YTAS  159 (263)
T ss_pred             hHHH
Confidence            9864

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-27  Score=179.06  Aligned_cols=147  Identities=17%  Similarity=0.245  Sum_probs=131.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc-C
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL-G   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~-~   88 (167)
                      .+|+++||||++|||++++++|+++|++|++++|+++.++++.+       ..+.++.+|++|+++++++++++. .. +
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999999999998876654332       246788999999999999999986 54 6


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ...+++.+.+.++++..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++|
T Consensus        76 ~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  151 (277)
T PRK05993         76 RLDALFNNGAY---GQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNAS  151 (277)
T ss_pred             CccEEEECCCc---CCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHH
Confidence            89999999998   66778889999999999999999999999999999998888999999999999999999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=1.7e-27  Score=193.50  Aligned_cols=149  Identities=27%  Similarity=0.391  Sum_probs=133.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ..+|+++||||++|||+++|++|+++|++|++++|+++.++++.+.+    +.++..+.+|++|+++++++++++. +++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999999999999988777666543    4567889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   . ...++.+.+.++|++++++|+.+++++++.++|.|.  +.|+||++||.++..+.+++..|++|
T Consensus       343 ~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~as  417 (520)
T PRK06484        343 RLDVLVNNAGI---AEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCAS  417 (520)
T ss_pred             CCCEEEECCCC---cCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHH
Confidence            99999999998   4 345788899999999999999999999999999993  35899999999999999999999875

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.3e-27  Score=175.35  Aligned_cols=153  Identities=24%  Similarity=0.319  Sum_probs=134.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++|||++++||++++++|+++|++|++++|+.+ ..+..+.+.. .+.++.++.+|++++++++++++++. +++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCG-RGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999864 3444455544 45678899999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc-ccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS-LNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.+++++.+++|+.+++.+.+.+.|.+.+++.++||++||..+ ..+.+++..|++|
T Consensus        82 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  158 (263)
T PRK08226         82 RIDILVNNAGV---CRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALT  158 (263)
T ss_pred             CCCEEEECCCc---CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHH
Confidence            99999999998   6677888899999999999999999999999999998877789999999887 4566788888764

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.5e-27  Score=173.31  Aligned_cols=154  Identities=23%  Similarity=0.326  Sum_probs=139.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||++++||++++++|+++|++|++++|+++..++..+.++. .+.++.++.+|++++++++++++++. .++
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA-AGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999999999999998888877777765 56689999999999999999999998 789


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+.+.+.|.|.+++.|++|++||..+..+.+++..|+++
T Consensus        84 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  159 (250)
T PRK12939         84 GLDGLVNNAGI---TNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVAS  159 (250)
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHH
Confidence            99999999998   66677888899999999999999999999999999988778899999999999888888888764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.8e-27  Score=175.39  Aligned_cols=149  Identities=21%  Similarity=0.306  Sum_probs=135.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h-cCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S-LGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~-~~~i   90 (167)
                      |+++||||+++||++++++|+++|++|++++|+.+.++++.+.+   .+.++.++.+|++++++++++++.+. + .+++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL---GAGNAWTGALDVTDRAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999988777776654   24578999999999999999999887 5 7899


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||||.   ....++.+.+.++++..+++|+.+++.+++.+.+.|++++.++||++||..+..+.+++..|++|
T Consensus        79 d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  152 (260)
T PRK08267         79 DVLFNNAGI---LRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSAT  152 (260)
T ss_pred             CEEEECCCC---CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHH
Confidence            999999998   66677888899999999999999999999999999998888999999999999999988888764

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.1e-27  Score=174.64  Aligned_cols=153  Identities=27%  Similarity=0.368  Sum_probs=134.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||+++||.+++++|+++|++|++++|+.+. .+..+.+   .+.++.++.+|++++++++++++++. +
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   86 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL---LGGNAKGLVCDVSDSQSVEAAVAAVISA   86 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh---hCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999998753 2223332   34467789999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+++..|++
T Consensus        87 ~~~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  163 (255)
T PRK06841         87 FGRIDILVNSAGV---ALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCA  163 (255)
T ss_pred             hCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHH
Confidence            8999999999998   6667788889999999999999999999999999998877899999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       164 s  164 (255)
T PRK06841        164 S  164 (255)
T ss_pred             H
Confidence            4

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=7.3e-27  Score=173.14  Aligned_cols=155  Identities=26%  Similarity=0.380  Sum_probs=137.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++++++||||+++||.+++++|+++|++|++++|+++..+++...+..  +.++.++.+|++++++++++++++. ++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35689999999999999999999999999999999998877777666543  4568899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++||++|..  ....++.+.+.++|+..+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+.|
T Consensus        80 ~~~d~vi~~ag~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  157 (251)
T PRK07231         80 GSVDILVNNAGTT--HRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNAS  157 (251)
T ss_pred             CCCCEEEECCCCC--CCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHH
Confidence            9999999999971  23456778899999999999999999999999999988777899999999999999988888764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.7e-27  Score=175.89  Aligned_cols=151  Identities=15%  Similarity=0.219  Sum_probs=134.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC-cEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS-QVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+.+.. .+. ...++.+|++++++++++++++. .++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARA-LGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999999999998888777777765 333 35668899999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+++..|++|
T Consensus        80 d~lv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  154 (272)
T PRK07832         80 DVVMNIAGI---SAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSAS  154 (272)
T ss_pred             CEEEECCCC---CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHH
Confidence            999999998   5667788999999999999999999999999999997653 5899999999998898999999864

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.6e-27  Score=176.95  Aligned_cols=145  Identities=25%  Similarity=0.296  Sum_probs=131.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .+++++||||+|+||++++++|+++|++|++++|+++..+         ...++.++.+|++|+++++++++.+. ++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA---------PIPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            4688999999999999999999999999999999865432         12357889999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ...+++.+.+.++++..+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|++|
T Consensus        74 ~d~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  148 (270)
T PRK06179         74 IDVLVNNAGV---GLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAAS  148 (270)
T ss_pred             CCEEEECCCC---CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHH
Confidence            9999999998   67788888999999999999999999999999999999888999999999999999988888864

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.6e-27  Score=174.96  Aligned_cols=151  Identities=19%  Similarity=0.192  Sum_probs=130.4

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ....+++|+++|||+++|||++++++|+++|++|++++|+++..          ...++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVL   72 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHH
Confidence            33456799999999999999999999999999999999975421          23468889999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC-Cccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA-GFSE  163 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~  163 (167)
                       +++++|++|||||... ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+ ++..
T Consensus        73 ~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~  151 (260)
T PRK06523         73 ERLGGVDILVHVLGGSS-APAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTA  151 (260)
T ss_pred             HHcCCCCEEEECCcccc-cCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcch
Confidence             8899999999999611 124567788999999999999999999999999999988778999999999988865 7888


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       152 Y~~s  155 (260)
T PRK06523        152 YAAA  155 (260)
T ss_pred             hHHH
Confidence            8764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.6e-27  Score=172.51  Aligned_cols=153  Identities=22%  Similarity=0.312  Sum_probs=136.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      +|+++|||+++|||++++++|+++|++|++.+|+++..+++...+.... +.++.++.+|++++++++++++++. ++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6889999999999999999999999999999999888887777665422 5579999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC-ccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG-FSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~y~as  167 (167)
                      +|++|||+|+   ....++.+.+.+.+++.+++|+.+++.+++.+.|.+++.+.++||++||..+..+.++ +..|++|
T Consensus        82 id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s  157 (248)
T PRK08251         82 LDRVIVNAGI---GKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAAS  157 (248)
T ss_pred             CCEEEECCCc---CCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHH
Confidence            9999999998   5666777888899999999999999999999999998877789999999999888875 6778764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.95  E-value=4.3e-27  Score=173.35  Aligned_cols=147  Identities=15%  Similarity=0.161  Sum_probs=128.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++|||+++|||++++++|+++|++|++++|+++...   +.++. .+  +.++.+|++++++++++++++. .++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~-~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ-AG--AQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH-cC--CEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            589999999999999999999999999999999875432   33322 22  5778999999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||||.   ....+..+.+.++|++++++|+.+++.+++.+.|.|.+++  .|+||++||..+..+.+++.+|++|
T Consensus        76 d~lv~~ag~---~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~as  151 (236)
T PRK06483         76 RAIIHNASD---WLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAAS  151 (236)
T ss_pred             cEEEECCcc---ccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHH
Confidence            999999998   5555566788999999999999999999999999998865  6899999999998888999999875

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=173.45  Aligned_cols=154  Identities=21%  Similarity=0.264  Sum_probs=134.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ..+|+++||||+++||++++++|+++|++|+++.+ +.+..+++.+.+.. .+.++.++.+|++|+++++++++++. ..
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA-LGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999988765 45556666666655 56678999999999999999999998 78


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.+.+.++..|++|+++|..+..+.|++..|++|
T Consensus        86 ~~iD~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~s  162 (258)
T PRK09134         86 GPITLLVNNASL---FEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLS  162 (258)
T ss_pred             CCCCEEEECCcC---CCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHH
Confidence            999999999998   66677888999999999999999999999999999988777899999998777777888888864

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=172.93  Aligned_cols=158  Identities=24%  Similarity=0.365  Sum_probs=140.1

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ....+++|+++|||++++||++++++|+++|++|++++|++++++++...+.. .+.++.++.+|++++++++++++++.
T Consensus         3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEA-EGGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            33446789999999999999999999999999999999999888888777765 45678999999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--------CceEEEecCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--------KGTIIFTGCSASLN  156 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~  156 (167)
                       +++++|++|||+|.   ....++.+.+.++|+.++++|+.+++.+.+.+.|.|.++.        .|++|++||..+..
T Consensus        82 ~~~~~~d~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  158 (258)
T PRK06949         82 TEAGTIDILVNNSGV---STTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR  158 (258)
T ss_pred             HhcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC
Confidence             88999999999998   5666777888999999999999999999999999998764        47999999999988


Q ss_pred             CCCCccccccC
Q 031016          157 GIAGFSELCKN  167 (167)
Q Consensus       157 ~~~~~~~y~as  167 (167)
                      +.+...+|++|
T Consensus       159 ~~~~~~~Y~~s  169 (258)
T PRK06949        159 VLPQIGLYCMS  169 (258)
T ss_pred             CCCCccHHHHH
Confidence            88888888753

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=4.8e-27  Score=175.42  Aligned_cols=148  Identities=14%  Similarity=0.124  Sum_probs=124.0

Q ss_pred             CCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.+|+++|||+  ++|||++++++|+++|++|++++|+.  +.++++.+.    .+.++.++.+|++|+++++++++++.
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKR----LPEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHh----cCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            46899999999  89999999999999999999998764  333444333    33467789999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           86 -SLGFVEVLVYNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                       +++++|++|||||+   .+.    .++.+.+.++|++.+++|+.+++.+++.++|.|.+  .|+||++|+. +..+.+.
T Consensus        81 ~~~g~iD~li~nAG~---~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~  154 (256)
T PRK07889         81 EHVDGLDGVVHSIGF---APQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPA  154 (256)
T ss_pred             HHcCCCcEEEEcccc---ccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCc
Confidence             88999999999998   432    45778889999999999999999999999999974  4799999865 3456677


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       155 ~~~Y~as  161 (256)
T PRK07889        155 YDWMGVA  161 (256)
T ss_pred             cchhHHH
Confidence            8888875

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=6.9e-27  Score=190.01  Aligned_cols=152  Identities=27%  Similarity=0.420  Sum_probs=134.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .+|+++|||+++|||++++++|+++|++|++++|+.+.++++.+.+    +.++.++.+|++++++++++++++. ++++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999999988777665543    4577889999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCc-eEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKG-TIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||||... ....++.+.+.++|++++++|+.+++.++++++|.|.+++.| +||++||..+..+.+++..|++|
T Consensus        80 iD~li~nag~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as  157 (520)
T PRK06484         80 IDVLVNNAGVTD-PTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS  157 (520)
T ss_pred             CCEEEECCCcCC-CCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence            999999999711 123567789999999999999999999999999999876655 99999999999999999999875

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=5e-27  Score=178.78  Aligned_cols=142  Identities=23%  Similarity=0.291  Sum_probs=128.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ....+++++|||+++|||+++|+.|+++|++|++.+|+.++.++.++.+... ...++.++.+|+++.++++++.++.+ 
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            3457899999999999999999999999999999999999988888888752 45678999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +.+++|++|||||+   .....  ..+.|.++..|.+|+.|+|.+++.++|.++++..+|||++||...
T Consensus       111 ~~~~ldvLInNAGV---~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  111 KEGPLDVLINNAGV---MAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             cCCCccEEEeCccc---ccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence            89999999999999   33222  677789999999999999999999999999887799999999876

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.95  E-value=1.1e-26  Score=172.24  Aligned_cols=153  Identities=31%  Similarity=0.365  Sum_probs=139.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++||||+++||++++++|+++|++|++++|+.+..+++.+.+.. .+.++.++.+|++++++++++++++. .+++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA-KGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999999998887777777765 56679999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++||++|.   ....++.+.+.++|+..+++|+.+++.+.+.+.+.|.+++.++||++||..+..+.+++..|++|
T Consensus        81 ~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~s  155 (250)
T TIGR03206        81 VDVLVNNAGW---DKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAAC  155 (250)
T ss_pred             CCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHH
Confidence            9999999998   56677888889999999999999999999999999988777899999999999888888888764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=174.50  Aligned_cols=153  Identities=23%  Similarity=0.344  Sum_probs=136.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++||||+|++|++++++|+++|++|++++|+++..++..+.+... .+.++.++.+|++|++++++ ++++. .++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            4789999999999999999999999999999999988777776666542 13578999999999999999 88887 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ...+++.+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+++..|++|
T Consensus        81 ~id~vv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  156 (280)
T PRK06914         81 RIDLLVNNAGY---ANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSS  156 (280)
T ss_pred             CeeEEEECCcc---cccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHh
Confidence            99999999998   66677888899999999999999999999999999988877899999999999999999999864

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=173.15  Aligned_cols=154  Identities=14%  Similarity=0.051  Sum_probs=128.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++++||||++|||+++|++|+++| ++|++++|++++ ++++.++++...+.+++++.+|++|+++++++++++.+.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            46899999999999999999999995 899999999876 7778777766233478999999999999999998887448


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|+|+|.   .........+.++..+.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++|
T Consensus        87 ~id~li~~ag~---~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~s  162 (253)
T PRK07904         87 DVDVAIVAFGL---LGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGST  162 (253)
T ss_pred             CCCEEEEeeec---CCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHH
Confidence            99999999998   32221112234556678999999999999999999999888999999999988888888889875

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-26  Score=170.19  Aligned_cols=156  Identities=17%  Similarity=0.248  Sum_probs=136.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC--HHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD--SRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~-~   86 (167)
                      +++|+++|||++++||+++++.|+++|++|++++|+++.+++..+.+....+.+..++.+|+++  .++++++++++. .
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999999999888888777765234467888999985  568888888888 6


Q ss_pred             c-CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           87 L-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~-~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      . +++|++|||||..  ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+.+.+++|++||..+..+.+++..|+
T Consensus        84 ~~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         84 TQGKLDGIVHCAGYF--YALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             hCCCCCEEEEecccc--ccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            6 7899999999971  234578889999999999999999999999999999887778999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       162 ~s  163 (239)
T PRK08703        162 AS  163 (239)
T ss_pred             Hh
Confidence            75

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=173.84  Aligned_cols=149  Identities=21%  Similarity=0.308  Sum_probs=133.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      .|+++||||+|+||++++++|+++|++|++++|+++.++++.+.    .+.++.++.+|++|+++++++++++. .++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR----YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999988766655443    34578899999999999999999988 78999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||||.   ...++..+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..+.|++..|++|
T Consensus        78 d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  151 (276)
T PRK06482         78 DVVVSNAGY---GLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHAT  151 (276)
T ss_pred             CEEEECCCC---CCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHH
Confidence            999999998   66677888889999999999999999999999999988777899999999988888888899864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.95  E-value=2.4e-26  Score=169.85  Aligned_cols=151  Identities=21%  Similarity=0.274  Sum_probs=134.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||++++||++++++|+++|+.|++.+|+.+++++..+.    .+.++.++.+|++++++++++++++. +++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAE----LGERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----hCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999998888887776665543    34568889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|+..+++|+.+++++++.+.+.+.+++.++||++||..+..+.+++..|++|
T Consensus        80 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  155 (245)
T PRK12936         80 GVDILVNNAGI---TKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCAS  155 (245)
T ss_pred             CCCEEEECCCC---CCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHH
Confidence            99999999998   66677788899999999999999999999999998887777899999999999998988888764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.95  E-value=2.3e-26  Score=171.15  Aligned_cols=146  Identities=19%  Similarity=0.280  Sum_probs=126.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++|||++++||+++++.|+++|++|++++|+++.+++..+.+....+ ..+.++.+|++|+++++++++++. +++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999998888888777754223 346677999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      ++|++||||+........++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  150 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV  150 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence            99999999986221223567889999999999999999999999999999988888999999987754

>PLN00015 protochlorophyllide reductase

Probab=99.95  E-value=1.2e-26  Score=177.61  Aligned_cols=136  Identities=25%  Similarity=0.371  Sum_probs=120.4

Q ss_pred             EEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccEE
Q 031016           16 AIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEVL   93 (167)
Q Consensus        16 lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~l   93 (167)
                      +||||++|||++++++|+++| ++|++++|+.+..+++.+.+.. .+.++.++.+|++++++++++++++. .++++|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-PKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            599999999999999999999 9999999998888777777654 45578889999999999999999998 78899999


Q ss_pred             EEcCCCCCCCCC-CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccc
Q 031016           94 VYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASL  155 (167)
Q Consensus        94 v~~ag~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~  155 (167)
                      |||||+   ... .+..+.+.++|+.++++|+.+++.+++.++|.|.+++  .|+||++||..+.
T Consensus        80 InnAG~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         80 VCNAAV---YLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             EECCCc---CCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            999998   332 3566788999999999999999999999999998875  5899999998764

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.4e-26  Score=173.12  Aligned_cols=154  Identities=29%  Similarity=0.411  Sum_probs=137.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ..+|+++||||+++||++++++|+++|++|++++|+.+.+.+..+.+.. .+.++.++.+|++++++++++++++. .++
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA-DGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999988777766666655 55678899999999999999999988 788


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....+..+.+.+++++.+++|+.+++.+++.+++.+.+++.|+||++||..+..+.++...|++|
T Consensus        87 ~id~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (274)
T PRK07775         87 EIEVLVSGAGD---TYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAA  162 (274)
T ss_pred             CCCEEEECCCc---CCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHH
Confidence            99999999998   56667778899999999999999999999999999988777899999999998888888888764

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.7e-27  Score=178.04  Aligned_cols=144  Identities=19%  Similarity=0.240  Sum_probs=124.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+.+... .+.++.++.+|++|.++++++++++. 
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999999988777766666542 24578899999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      +++++|++|||||.   ...  ....+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..
T Consensus        92 ~~~~iD~li~nAg~---~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~  157 (306)
T PRK06197         92 AYPRIDLLINNAGV---MYT--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRI  157 (306)
T ss_pred             hCCCCCEEEECCcc---ccC--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhc
Confidence            88999999999998   322  2346778999999999999999999999999987778999999987543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=3.6e-26  Score=169.52  Aligned_cols=158  Identities=20%  Similarity=0.272  Sum_probs=138.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC--CHHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS--DSRSVREAFEGVL   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~   85 (167)
                      ..+++|+++|||++++||.+++++|+++|++|++++|+.+..+++.+++......++.++.+|++  ++++++++++.+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            34579999999999999999999999999999999999888888877776533446777888886  7899999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                       .++++|++|||||..  ....++.+.+.++|+..+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++.+|
T Consensus        88 ~~~~~id~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y  165 (247)
T PRK08945         88 EQFGRLDGVLHNAGLL--GELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAY  165 (247)
T ss_pred             HHhCCCCEEEECCccc--CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCccc
Confidence             889999999999972  23356778889999999999999999999999999998888899999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       166 ~~s  168 (247)
T PRK08945        166 AVS  168 (247)
T ss_pred             HHH
Confidence            864

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.8e-26  Score=169.58  Aligned_cols=153  Identities=22%  Similarity=0.385  Sum_probs=135.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ..++|+++|||++++||++++++|+++|++|+++.|+. ...+++.+.+.. .+.++.++.+|++++++++++++++. +
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999998887654 445666666765 66789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....++.+.+.++|+.++++|+.+++.+++.++|.|.+  .|+||++||..+..+.+++..|++
T Consensus        81 ~~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~  155 (245)
T PRK12937         81 FGRIDVLVNNAGV---MPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAA  155 (245)
T ss_pred             cCCCCEEEECCCC---CCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHH
Confidence            8999999999998   56677888899999999999999999999999999865  379999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       156 s  156 (245)
T PRK12937        156 S  156 (245)
T ss_pred             H
Confidence            4

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.95  E-value=4.1e-26  Score=175.53  Aligned_cols=141  Identities=23%  Similarity=0.323  Sum_probs=122.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ..+|+++||||++|||++++++|+++|++|++++|+.++.++..+.+.. .+.++.++.+|+++.++++++++++. ..+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3589999999999999999999999999999999998888887777754 45578899999999999999999887 667


Q ss_pred             CccEEEEcCCCCCCCCC-CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC--ceEEEecCCcc
Q 031016           89 FVEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK--GTIIFTGCSAS  154 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~iss~~~  154 (167)
                      ++|++|||||+   ... .+..+.+.++|+..+++|+.+++.+++.++|.|++++.  ++||++||...
T Consensus        83 ~iD~li~nAg~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~  148 (322)
T PRK07453         83 PLDALVCNAAV---YMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA  148 (322)
T ss_pred             CccEEEECCcc---cCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc
Confidence            89999999998   322 23446788999999999999999999999999988753  69999999754

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.6e-26  Score=173.03  Aligned_cols=154  Identities=23%  Similarity=0.325  Sum_probs=133.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +.+++|+++||||+++||.+++++|+++|++|++++|+.+ ..++..+.++. .+.++.++.+|++++++++++++++. 
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998753 34555555544 56678899999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      .++++|++|||||.   . ...++.+.+.++|.+.+++|+.+++.+++++.+.|.+  .|+||++||..+..+.+++..|
T Consensus       121 ~~~~iD~lI~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y  195 (290)
T PRK06701        121 ELGRLDILVNNAAF---QYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDY  195 (290)
T ss_pred             HcCCCCEEEECCcc---cCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchh
Confidence            88999999999997   3 3456788999999999999999999999999999865  3799999999999998888888


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       196 ~~s  198 (290)
T PRK06701        196 SAT  198 (290)
T ss_pred             HHH
Confidence            864

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-26  Score=169.13  Aligned_cols=154  Identities=21%  Similarity=0.325  Sum_probs=131.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||++++||++++++|+++|++|++++|+++..+++.+.+.. .+.++.++.+|++++++++++++++. +++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA-DGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4679999999999999999999999999999999998777777776655 45578889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|........++.+.+.++|++.+++|+.+++.+++.++|.+.+++.|+||++||..+..+   ...|++|
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~Y~~s  158 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---SNFYGLA  158 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---ccccHHH
Confidence            999999999982211235677888999999999999999999999999998877889999999887644   3456543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.95  E-value=2.6e-26  Score=191.24  Aligned_cols=162  Identities=27%  Similarity=0.404  Sum_probs=143.2

Q ss_pred             CCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHH
Q 031016            3 NMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus         3 ~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~   81 (167)
                      +|.+..++.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+.+....+ .++..+.+|+++++++++++
T Consensus       405 ~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~  484 (676)
T TIGR02632       405 RMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF  484 (676)
T ss_pred             cCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence            45555567899999999999999999999999999999999998887777766654222 36788999999999999999


Q ss_pred             HHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCC
Q 031016           82 EGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIA  159 (167)
Q Consensus        82 ~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~  159 (167)
                      +++. +++++|++|||||.   ....++.+.+.++|+..+++|+.+++.+++.+++.|.+++ .|+||++||..+..+.+
T Consensus       485 ~~i~~~~g~iDilV~nAG~---~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~  561 (676)
T TIGR02632       485 ADVALAYGGVDIVVNNAGI---ATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK  561 (676)
T ss_pred             HHHHHhcCCCcEEEECCCC---CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC
Confidence            9998 89999999999998   5667888889999999999999999999999999998865 57999999999999999


Q ss_pred             CccccccC
Q 031016          160 GFSELCKN  167 (167)
Q Consensus       160 ~~~~y~as  167 (167)
                      ++.+|++|
T Consensus       562 ~~~aY~aS  569 (676)
T TIGR02632       562 NASAYSAA  569 (676)
T ss_pred             CCHHHHHH
Confidence            99999875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=4.8e-26  Score=169.91  Aligned_cols=154  Identities=25%  Similarity=0.297  Sum_probs=134.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.++++...+.+.. .+.++.++.+|++|+++++++++++. .+
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA-LGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998887777777765 56678899999999999999999998 78


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHh-hHhcCCceEEEecCCccccCCCC----cc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSG-MVERGKGTIIFTGCSASLNGIAG----FS  162 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~g~iv~iss~~~~~~~~~----~~  162 (167)
                      +++|++|||+|.   ....+..+.+.++|++.+++|+.+++.+.+.+.+. +.+++.++||++||..+..+.++    +.
T Consensus        88 ~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~  164 (259)
T PRK08213         88 GHVDILVNNAGA---TWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTI  164 (259)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcc
Confidence            999999999998   55567778889999999999999999999999998 77766789999999887766554    36


Q ss_pred             cccc
Q 031016          163 ELCK  166 (167)
Q Consensus       163 ~y~a  166 (167)
                      .|++
T Consensus       165 ~Y~~  168 (259)
T PRK08213        165 AYNT  168 (259)
T ss_pred             hHHH
Confidence            7765

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.95  E-value=4.3e-26  Score=169.31  Aligned_cols=147  Identities=20%  Similarity=0.270  Sum_probs=132.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++|||++++||++++++|+++|++|++++|+.         +.. .+.++.++.+|++++++++++++++. +
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAE   73 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999875         112 45578899999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.+.+.|.+++.|+||++||..+..+.+++..|++
T Consensus        74 ~~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  150 (252)
T PRK08220         74 TGPLDVLVNAAGI---LRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGA  150 (252)
T ss_pred             cCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHH
Confidence            8999999999998   6667888889999999999999999999999999999887889999999999988888888886


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       151 s  151 (252)
T PRK08220        151 S  151 (252)
T ss_pred             H
Confidence            4

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.95  E-value=5.7e-26  Score=167.53  Aligned_cols=151  Identities=26%  Similarity=0.337  Sum_probs=134.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      |+++|||++++||+.++++|+++|++|+++.| +++..++..+.+.. .+.++.++.+|++++++++++++++. ..+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA-LGFDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999887 55556665555544 45679999999999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.+++.|.+++.++||++||..+..+.+++..|+++
T Consensus        80 d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  153 (242)
T TIGR01829        80 DVLVNNAGI---TRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAA  153 (242)
T ss_pred             cEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHH
Confidence            999999998   66667788899999999999999999999999999998877899999999998888888888764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=4.5e-26  Score=168.44  Aligned_cols=155  Identities=23%  Similarity=0.308  Sum_probs=139.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++|||++++||.+++++|+++|++|+++ +|+++...+..+.+.. .+.++.++.+|++++++++++++++. .
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999998 9988877777777765 56678999999999999999999988 7


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|+++|.   ....++.+.+.++|+..+++|+.+++.+.+.+.+.+.+++.+++|++||..+..+.+.+..|++
T Consensus        81 ~~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~  157 (247)
T PRK05565         81 FGKIDILVNNAGI---SNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSA  157 (247)
T ss_pred             hCCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHH
Confidence            8999999999998   5666778889999999999999999999999999998887789999999999888888888875


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       158 s  158 (247)
T PRK05565        158 S  158 (247)
T ss_pred             H
Confidence            3

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.95  E-value=5.7e-26  Score=167.82  Aligned_cols=152  Identities=24%  Similarity=0.333  Sum_probs=133.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .|+++|||++++||++++++|+++|++|++++|++. ..++..+.+.. .+.++.++.+|++++++++++++++. ++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            368999999999999999999999999999998754 23333333333 45578999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.+++.+.+++.++||++||..+..+.+++..|++|
T Consensus        81 id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~s  155 (245)
T PRK12824         81 VDILVNNAGI---TRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAA  155 (245)
T ss_pred             CCEEEECCCC---CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHH
Confidence            9999999998   66677888999999999999999999999999999988778899999999999888888888864

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6e-26  Score=169.34  Aligned_cols=154  Identities=23%  Similarity=0.307  Sum_probs=137.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++|||++++||+.++++|+++|++ |++++|+.+...+..+.+.. .+.++.++.+|++++++++++++.+. ++
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999998 99999988777777777755 56788899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++||++|.   ....++.+.+.++|+..+++|+.+++.+++.+++.|.++. .|++|++||..+..+.+++..|++
T Consensus        83 g~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  159 (260)
T PRK06198         83 GRLDALVNAAGL---TDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA  159 (260)
T ss_pred             CCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence            999999999998   5667778889999999999999999999999999998764 589999999999888888888886


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       160 s  160 (260)
T PRK06198        160 S  160 (260)
T ss_pred             H
Confidence            4

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.6e-26  Score=170.63  Aligned_cols=156  Identities=20%  Similarity=0.231  Sum_probs=137.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ++++|+++|||++++||.+++++|+++|++|++++|+.+..++..+.+.... +.++.++.+|++++++++++++++. +
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999887777766665422 3578899999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++++|++|||+|.   . ...++.+.+.++|+..+++|+.+++.+++.+.+.|.+++.|+||++||..+..+.+++.+|+
T Consensus        84 ~~~~d~li~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  160 (276)
T PRK05875         84 HGRLHGVVHCAGG---SETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG  160 (276)
T ss_pred             cCCCCEEEECCCc---ccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH
Confidence            8999999999997   3 33567788899999999999999999999999999887778999999999988888888888


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       161 ~s  162 (276)
T PRK05875        161 VT  162 (276)
T ss_pred             HH
Confidence            64

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=1.3e-27  Score=164.08  Aligned_cols=149  Identities=27%  Similarity=0.336  Sum_probs=134.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++.|+++++||+..|||+++++.|+..|++|+.+.|+++.+..+.+++    +.-+..+..|+++++.+.+.+..+   +
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~v---~   76 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVPV---F   76 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhccc---C
Confidence            357999999999999999999999999999999999999998888765    334888899999988776666554   8


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||+   .-..|+.+++.+++++.|++|+.+++.+.|...+.+.+++ .|.||++||.++.++..+...||++
T Consensus        77 pidgLVNNAgv---A~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcat  153 (245)
T KOG1207|consen   77 PIDGLVNNAGV---ATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCAT  153 (245)
T ss_pred             chhhhhccchh---hhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeec
Confidence            99999999999   7788999999999999999999999999999888777665 7899999999999999999999985

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.6e-26  Score=168.78  Aligned_cols=149  Identities=21%  Similarity=0.274  Sum_probs=131.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++||||+++||++++++|+++|++|++++|+.+.+++..+.    .+.++.++.+|++++++++++++.+. .++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE----LGESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3579999999999999999999999999999999987666555443    35578899999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++++.|.|.+  .+++|+++|..+..+.+++..|++|
T Consensus        80 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~s  153 (249)
T PRK06500         80 RLDAVFINAGV---AKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAAS  153 (249)
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHH
Confidence            99999999998   56667788899999999999999999999999999865  3699999999998888898999864

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.95  E-value=7.5e-26  Score=167.61  Aligned_cols=153  Identities=23%  Similarity=0.379  Sum_probs=138.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++||||++++|++++++|+++|++|++++|+.++..+..+.+.. .+.++.++.+|++|+++++++++++. ++++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA-AGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999998877777777765 56679999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~y~as  167 (167)
                      +|++||++|.   ....++.+.+.++++..+++|+.+++.+.+.+.+.|.+++.++||++||..+. .+.+++..|++|
T Consensus        84 ~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~s  159 (251)
T PRK12826         84 LDILVANAGI---FPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAAS  159 (251)
T ss_pred             CCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHH
Confidence            9999999998   66677788899999999999999999999999999988777899999999988 777888888753

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.95  E-value=6.3e-26  Score=167.27  Aligned_cols=149  Identities=17%  Similarity=0.246  Sum_probs=130.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEV   92 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~   92 (167)
                      ++|||++++||++++++|+++|++|++++|. .+..+++.+.++. .+.++.++.+|++++++++++++++. .++++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999888764 4556677777765 56789999999999999999999988 8899999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHH-HhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL-SGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|+|+|.   ....++.+.+.++|+.++++|+.+++.+.+.++ |.+++++.|+||++||..+..+.+++..|++|
T Consensus        80 li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~s  152 (239)
T TIGR01831        80 VVLNAGI---TRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAA  152 (239)
T ss_pred             EEECCCC---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHH
Confidence            9999998   666778888999999999999999999999875 55555667899999999999999999999864

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06196 oxidoreductase; Provisional

Probab=99.94  E-value=3.1e-26  Score=175.73  Aligned_cols=137  Identities=20%  Similarity=0.184  Sum_probs=119.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.++.++..+.+.     ++.++.+|++|.++++++++++. .+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999887776665542     37789999999999999999998 78


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +++|++|||||.   ...  ....+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+.
T Consensus        98 ~~iD~li~nAg~---~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~  160 (315)
T PRK06196         98 RRIDILINNAGV---MAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHR  160 (315)
T ss_pred             CCCCEEEECCCC---CCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhc
Confidence            999999999997   322  234567899999999999999999999999988777899999997653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.94  E-value=7.6e-26  Score=168.77  Aligned_cols=151  Identities=17%  Similarity=0.275  Sum_probs=128.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHH----cCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           14 IAAIVGVGPNLGRSIARKFAH----EGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|||+++|||++++++|++    +|++|++++|+.+.+++..++++.. .+.++.++.+|++++++++++++++. .+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999998888888877642 24578899999999999999999987 65


Q ss_pred             CCc----cEEEEcCCCCCCCCCC--CCCC-CCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccccCC
Q 031016           88 GFV----EVLVYNAYQPVSWQPT--NFTE-ISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASLNGI  158 (167)
Q Consensus        88 ~~i----~~lv~~ag~~~~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~  158 (167)
                      +++    |++|||||.   ....  ...+ .+.++|+..+++|+.+++.+++.++|.|.+++  .|+||++||..+..+.
T Consensus        82 g~~~~~~~~lv~nAG~---~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~  158 (256)
T TIGR01500        82 RPKGLQRLLLINNAGT---LGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF  158 (256)
T ss_pred             ccCCCceEEEEeCCcc---cCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC
Confidence            543    699999997   3321  2333 35789999999999999999999999998753  4799999999999999


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      +++.+|++|
T Consensus       159 ~~~~~Y~as  167 (256)
T TIGR01500       159 KGWALYCAG  167 (256)
T ss_pred             CCchHHHHH
Confidence            999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.94  E-value=1e-25  Score=167.26  Aligned_cols=148  Identities=25%  Similarity=0.377  Sum_probs=130.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~   92 (167)
                      +++|||++++||.+++++|+++|++|++++|+++.++++.+.+    +.++.++.+|++++++++++++++. .++++|+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999987766655443    4478899999999999999999988 7889999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +||++|.  .....+..+.+.++|+.++++|+.+++.+++.++|.+.+++.++||++||..+..+.+++..|++|
T Consensus        78 vi~~ag~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  150 (248)
T PRK10538         78 LVNNAGL--ALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGAT  150 (248)
T ss_pred             EEECCCc--cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHH
Confidence            9999997  122456778899999999999999999999999999988777899999999998888888888864

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.2e-26  Score=166.94  Aligned_cols=150  Identities=19%  Similarity=0.226  Sum_probs=133.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |+++||||+++||++++++|+++|++|++++|+++..++..+.+....+.++.++.+|++++++++++++++.  .++|+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--~~~d~   79 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP--ALPDI   79 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh--hcCCE
Confidence            6899999999999999999999999999999998887777776654345689999999999999999988875  34799


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|||+|.   ....+..+.+.+++.+.+++|+.+++.+.+.+.|.|.+++.+++|++||..+..+.++...|++|
T Consensus        80 vv~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  151 (243)
T PRK07102         80 VLIAVGT---LGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSA  151 (243)
T ss_pred             EEECCcC---CCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHH
Confidence            9999998   55667778899999999999999999999999999998878999999999998888888888864

>PRK07069 short chain dehydrogenase; Validated

Probab=99.94  E-value=9.1e-26  Score=167.38  Aligned_cols=150  Identities=24%  Similarity=0.320  Sum_probs=133.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHHHHHH-hcCCcc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFEGVL-SLGFVE   91 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~   91 (167)
                      ++|||++++||+++++.|+++|++|++++|+ .+.++++.+.+....+ ..+..+.+|++++++++++++++. +++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 6667777666654222 245678899999999999999998 889999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||+|.   ...+++.+.+.++++.++++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++|
T Consensus        82 ~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~s  154 (251)
T PRK07069         82 VLVNNAGV---GSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNAS  154 (251)
T ss_pred             EEEECCCc---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHH
Confidence            99999998   66678888999999999999999999999999999998878899999999999999999999864

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-25  Score=166.26  Aligned_cols=152  Identities=25%  Similarity=0.401  Sum_probs=130.3

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      +|+++|||++++||.+++++|+++|++|++.. |+++..++..+.++. .+.++.++.+|++|+++++++++++. ++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999988876 455556666666655 56678899999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCC-cccc
Q 031016           90 VEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAG-FSEL  164 (167)
Q Consensus        90 i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~-~~~y  164 (167)
                      +|++|||+|.   .. ..++.+.+.++|+..+++|+.+++.+++.+++.|.++.   .|+||++||..+..+.++ +..|
T Consensus        81 id~li~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y  157 (248)
T PRK06123         81 LDALVNNAGI---LEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDY  157 (248)
T ss_pred             CCEEEECCCC---CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccch
Confidence            9999999998   43 34677889999999999999999999999999997652   479999999999888876 4678


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       158 ~~s  160 (248)
T PRK06123        158 AAS  160 (248)
T ss_pred             HHH
Confidence            865

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.94  E-value=1.5e-25  Score=165.28  Aligned_cols=154  Identities=21%  Similarity=0.330  Sum_probs=138.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+++++|||++++||+.++++|+++|++|++++|+++..+.....++. .+.++.++.+|++++++++++++++. .++
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA-AGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3568999999999999999999999999999999998887777777765 66789999999999999999999988 789


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++||++|.   ....+..+.+.++++..++.|+.+++.+++.+.+.+.+.+.++||++||..+..+.+++..|+.+
T Consensus        82 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~s  157 (246)
T PRK05653         82 ALDILVNNAGI---TRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAA  157 (246)
T ss_pred             CCCEEEECCCc---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhH
Confidence            99999999998   66677788899999999999999999999999999988777899999999888888888888753

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1e-25  Score=168.45  Aligned_cols=151  Identities=25%  Similarity=0.445  Sum_probs=135.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +++++|||++++||++++++|+++|++|++++|+++..+++.+.+.. .+.++.++.+|++++++++++++++. +++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD-HGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999998887777777766 56689999999999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCC-CHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEI-SFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||+|.   ....++.+. +.|+++..+++|+.+++.+++.+.|.|.++ .+++|++||..+..+.+++..|++|
T Consensus        80 d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  153 (263)
T PRK06181         80 DILVNNAGI---TMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAAS  153 (263)
T ss_pred             CEEEECCCc---ccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHH
Confidence            999999998   666777777 899999999999999999999999998765 4899999999998888888888764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-25  Score=167.25  Aligned_cols=154  Identities=18%  Similarity=0.198  Sum_probs=126.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC----hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD----LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      +.+++|+++|||++++||++++++|+++|++|++++++    .+..++..+.++. .+.++.++.+|+++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA-AGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHH-hCCcEEEEecCcCCHHHHHHHHHH
Confidence            34568999999999999999999999999997776543    2345555566655 466788999999999999999999


Q ss_pred             HH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      +. +++++|++|||||.   ....++.+.+.++|++++++|+.+++.+++.+.|.|.++  |++++++|.....+.+++.
T Consensus        83 ~~~~~~~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~~~~~~  157 (257)
T PRK12744         83 AKAAFGRPDIAINTVGK---VLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTPFYS  157 (257)
T ss_pred             HHHhhCCCCEEEECCcc---cCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcccCCCcc
Confidence            98 88999999999998   566788889999999999999999999999999998753  5787764333333567788


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       158 ~Y~~s  162 (257)
T PRK12744        158 AYAGS  162 (257)
T ss_pred             cchhh
Confidence            88875

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.8e-25  Score=164.56  Aligned_cols=152  Identities=28%  Similarity=0.365  Sum_probs=134.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++++++||||+|+||++++++|+++|++|++++|+++.+.++.+.+.. . .++.++.+|++++++++++++++. .++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN-K-GNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc-c-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4579999999999999999999999999999999998888777777654 2 578899999999999999999988 788


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++||++|.   ....++.+.+.+++++.+++|+.+++.+++++++.+ +++.++||++||..+..+.++...|++|
T Consensus        82 ~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~s  156 (237)
T PRK07326         82 GLDVLIANAGV---GHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNAS  156 (237)
T ss_pred             CCCEEEECCCC---CCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHH
Confidence            99999999998   566778889999999999999999999999999998 4445899999999988888877778653

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-25  Score=167.45  Aligned_cols=151  Identities=26%  Similarity=0.353  Sum_probs=128.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||+++||.+++++|+++|++|++++|+....++..+.+    .  ..++.+|++++++++++++++. ..+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~--~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----G--GLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C--CcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999877666555443    1  2578899999999999999998 789


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC-CccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA-GFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~y~as  167 (167)
                      ++|++|||+|... ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+ ++..|++|
T Consensus        79 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~s  157 (255)
T PRK06057         79 SVDIAFNNAGISP-PEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTAS  157 (255)
T ss_pred             CCCEEEECCCcCC-CCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHH
Confidence            9999999999721 123466788899999999999999999999999999887778999999988877764 67778764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=2.6e-25  Score=164.85  Aligned_cols=152  Identities=22%  Similarity=0.349  Sum_probs=130.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .|+++|||++++||..+++.|+++|++|+++. |+++.+++..+.++. .+.++.++.+|++++++++++++++. .+++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999998764 566667777777765 56689999999999999999999998 7899


Q ss_pred             ccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCC-cccc
Q 031016           90 VEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAG-FSEL  164 (167)
Q Consensus        90 i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~-~~~y  164 (167)
                      +|++|||||.   .. ..++.+.+.++|+..+++|+.+++.+++.+++.+..++   .|+||++||..+..+.++ +..|
T Consensus        81 id~li~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y  157 (248)
T PRK06947         81 LDALVNNAGI---VAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDY  157 (248)
T ss_pred             CCEEEECCcc---CCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCccc
Confidence            9999999998   43 34677889999999999999999999999999987654   478999999998887764 5678


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       158 ~~s  160 (248)
T PRK06947        158 AGS  160 (248)
T ss_pred             Hhh
Confidence            865

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.8e-26  Score=187.73  Aligned_cols=155  Identities=25%  Similarity=0.334  Sum_probs=138.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. .+.++.++.+|++|+++++++++++. ++
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA-KGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999888888887766 56789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCC--CHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEI--SFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++|++|||||.   ....++.+.  +.++++..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++++.|+
T Consensus       447 g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  523 (657)
T PRK07201        447 GHVDYLVNNAGR---SIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYV  523 (657)
T ss_pred             CCCCEEEECCCC---CCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHH
Confidence            999999999997   444444332  258999999999999999999999999988889999999999998989999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       524 ~s  525 (657)
T PRK07201        524 AS  525 (657)
T ss_pred             HH
Confidence            64

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.3e-25  Score=165.79  Aligned_cols=154  Identities=23%  Similarity=0.332  Sum_probs=131.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .|+++|||++++||.+++++|+++|++|++++|+. +...+..+.++. .+.++.++.+|++++++++++++++. .+++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            48899999999999999999999999999998764 444555555554 45678999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC------CceEEEecCCccccCCCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG------KGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~iss~~~~~~~~~~~~  163 (167)
                      +|++|||+|... ....++.+.+.++|++.+++|+.+++.+++.+.+.|.++.      .++||++||..+..+.++...
T Consensus        81 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  159 (256)
T PRK12745         81 IDCLVNNAGVGV-KVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE  159 (256)
T ss_pred             CCEEEECCccCC-CCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcc
Confidence            999999999721 1234677888999999999999999999999999998764      357999999999999888889


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       160 Y~~s  163 (256)
T PRK12745        160 YCIS  163 (256)
T ss_pred             cHHH
Confidence            9864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.5e-25  Score=165.18  Aligned_cols=155  Identities=26%  Similarity=0.380  Sum_probs=128.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++||||+++||++++++|+++|++|++..+ +.+..+++.+.    .+.++.++.+|++++++++++++++. .
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADE----LGDRAIALQADVTDREQVQAMFATATEH   77 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----hCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999988755 44444444333    34578899999999999999999988 7


Q ss_pred             cCC-ccEEEEcCCCCCCC---CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           87 LGF-VEVLVYNAYQPVSW---QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        87 ~~~-i~~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      +++ +|++|||+|.....   ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++.
T Consensus        78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  157 (253)
T PRK08642         78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYH  157 (253)
T ss_pred             hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCcc
Confidence            776 99999999862111   12467788999999999999999999999999999887779999999988877777788


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       158 ~Y~~s  162 (253)
T PRK08642        158 DYTTA  162 (253)
T ss_pred             chHHH
Confidence            88864

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-25  Score=168.86  Aligned_cols=144  Identities=17%  Similarity=0.262  Sum_probs=127.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~   91 (167)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++.    .   ..+.++.+|++++++++++++.+. +++++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A---AGFTAVQLDVNDGAALARLAEELEAEHGGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            78999999999999999999999999999999876654432    1   236788999999999999999998 889999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||+|.   ...+++.+.+.++|+..+++|+.+++.+++.++|.|.+. .|+||++||..+..+.++...|++|
T Consensus        75 ~vi~~ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  146 (274)
T PRK05693         75 VLINNAGY---GAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCAS  146 (274)
T ss_pred             EEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHH
Confidence            99999998   566788888999999999999999999999999999764 4899999999999998888889864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=3.9e-25  Score=163.93  Aligned_cols=153  Identities=23%  Similarity=0.365  Sum_probs=132.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+++++|||++++||..++++|+++|++|++++|+++++++..+.+.. .+.++.++.+|++++++++++++.+. .++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA-LGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999999999998888888777766 56788999999999999999999988 778


Q ss_pred             CccEEEEcCCCCCCCCCCC--------C-CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccccCC
Q 031016           89 FVEVLVYNAYQPVSWQPTN--------F-TEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLNGI  158 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~  158 (167)
                      ++|++|||+|.   ....+        + .+.+.++|+..+++|+.+++.+.+.+++.+.++ ..++||++||. +..+.
T Consensus        82 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~~  157 (253)
T PRK08217         82 QLNGLINNAGI---LRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAGN  157 (253)
T ss_pred             CCCEEEECCCc---cCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccCC
Confidence            99999999997   33322        2 677889999999999999999999999999776 45789999886 45677


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      +++..|++|
T Consensus       158 ~~~~~Y~~s  166 (253)
T PRK08217        158 MGQTNYSAS  166 (253)
T ss_pred             CCCchhHHH
Confidence            888889864

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.4e-25  Score=164.71  Aligned_cols=151  Identities=23%  Similarity=0.289  Sum_probs=132.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc-
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL-   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~-   87 (167)
                      ++++++|||++++||.+++++|+++|++|++. .|+.++.++..+.+.. .+.++.++.+|++|+++++++++++. ++ 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIES-NGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999775 6877777776666654 45678899999999999999999887 65 


Q ss_pred             -----CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           88 -----GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        88 -----~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                           +++|++|||||.   ....++.+.+.++|+..+++|+.+++.+++.+.+.+.+.  |++|++||..+..+.+++.
T Consensus        84 ~~~~~~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~  158 (254)
T PRK12746         84 IRVGTSEIDILVNNAGI---GTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSI  158 (254)
T ss_pred             cccCCCCccEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCc
Confidence                 479999999998   566778888999999999999999999999999998653  6999999999988889999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       159 ~Y~~s  163 (254)
T PRK12746        159 AYGLS  163 (254)
T ss_pred             chHhh
Confidence            99865

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-25  Score=163.78  Aligned_cols=154  Identities=23%  Similarity=0.312  Sum_probs=133.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec----ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR----DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++++++||||+++||++++++|+++|++|++++|    +.+..+++.+.+.. .+.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999988765    34445555556655 56689999999999999999999988


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHH-HhhHhcCCceEEEecCCccccCCCCccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL-SGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                       .++++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.+. +.+++++.+++|++||..+..+.+++..
T Consensus        83 ~~~~~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  159 (249)
T PRK12827         83 EEFGRLDILVNNAGI---ATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN  159 (249)
T ss_pred             HHhCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCch
Confidence             78899999999998   666788889999999999999999999999999 6666666689999999999988888888


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       160 y~~s  163 (249)
T PRK12827        160 YAAS  163 (249)
T ss_pred             hHHH
Confidence            8764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.94  E-value=4.4e-25  Score=163.93  Aligned_cols=152  Identities=20%  Similarity=0.207  Sum_probs=136.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++|||++++||++++++|+++|++|++++|+++..+++.+.+.. .+.++.++.+|++++++++++++++. ..+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATD-AGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999998887777777665 55679999999999999999999998 78899


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|+++|.   ....+..+.+.++++.++++|+.+++.+++.+++.|.+.+.+++|++||..+..+.+++..|+++
T Consensus        80 d~vi~~a~~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~s  153 (255)
T TIGR01963        80 DILVNNAGI---QHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAA  153 (255)
T ss_pred             CEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHH
Confidence            999999998   56667778889999999999999999999999999988777899999999888888888888754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.94  E-value=6.4e-25  Score=162.14  Aligned_cols=155  Identities=24%  Similarity=0.306  Sum_probs=135.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+.+|+++|||++|+||++++++|+++|++|+++.|+.. ...+..+++.. .+.++.++.+|+++++++.++++++. +
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA-LGGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999988877654 35555566654 56688999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++||++|.   ....+..+.+.++++..+++|+.+++.+.+.+.+.+.+++.+++|++||..+..+.+++..|++
T Consensus        81 ~~~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~  157 (248)
T PRK05557         81 FGGVDILVNNAGI---TRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAA  157 (248)
T ss_pred             cCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHH
Confidence            8899999999998   6667777889999999999999999999999999998877789999999988888888888876


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       158 s  158 (248)
T PRK05557        158 S  158 (248)
T ss_pred             H
Confidence            4

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.2e-25  Score=165.09  Aligned_cols=147  Identities=24%  Similarity=0.297  Sum_probs=130.3

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +|+++|||++|+||++++++|+++|++|++++|+++..+++.+.++. .+.++.++.+|+++++++++++.     +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~-----~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR-RGLALRVEKLDLTDAIDRAQAAE-----WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeeCCCHHHHHHHhc-----CCCC
Confidence            57899999999999999999999999999999988777777666655 55678899999999998877654     4799


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||||.   ...++..+.+.++++..+++|+.+++.+.+.+++.+.+++.++||++||..+..+.++...|++|
T Consensus        76 ~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~s  148 (257)
T PRK09291         76 VLLNNAGI---GEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCAS  148 (257)
T ss_pred             EEEECCCc---CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHH
Confidence            99999998   66778889999999999999999999999999999988877899999999998888888888764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.94  E-value=2.5e-25  Score=166.95  Aligned_cols=152  Identities=18%  Similarity=0.253  Sum_probs=123.2

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHH----HHHHHHHH-h
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSV----REAFEGVL-S   86 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~----~~~~~~~~-~   86 (167)
                      ++++||||++|||++++++|+++|++|++++| +++.++++.+.+....+.++.++.+|++|++++    +++++.+. .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            68999999999999999999999999998865 456676776666542455777899999999865    45555555 6


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCH-----------HHHHHHhhhhhHHHHHHHHHHHHhhHhc------CCceEEEe
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISF-----------DSFQKSIAISSLGAFLCAQQVLSGMVER------GKGTIIFT  149 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~i  149 (167)
                      ++++|++|||||.   ....++.+.+.           ++|.+++++|+.+++.+++.+.|.|.++      ..++||++
T Consensus        82 ~g~iD~lv~nAG~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~  158 (267)
T TIGR02685        82 FGRCDVLVNNASA---FYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL  158 (267)
T ss_pred             cCCceEEEECCcc---CCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence            7899999999997   44445544333           3599999999999999999999998653      24689999


Q ss_pred             cCCccccCCCCccccccC
Q 031016          150 GCSASLNGIAGFSELCKN  167 (167)
Q Consensus       150 ss~~~~~~~~~~~~y~as  167 (167)
                      +|..+..+.+++.+|++|
T Consensus       159 ~s~~~~~~~~~~~~Y~as  176 (267)
T TIGR02685       159 CDAMTDQPLLGFTMYTMA  176 (267)
T ss_pred             hhhhccCCCcccchhHHH
Confidence            999999999999999875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=5.6e-25  Score=163.24  Aligned_cols=152  Identities=20%  Similarity=0.271  Sum_probs=132.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++++++|||++++||++++++|+++|++|++..|+ .+...+..+.++. .+.++.++.+|++++++++++++++. .+
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999887653 4445555555555 55678899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||+|.   ....++.+.+.++++..+++|+.+++.+++.+.|.+.+.  |+||++||..+..+.+++..|++|
T Consensus        83 ~~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~s  157 (252)
T PRK06077         83 GVADILVNNAGL---GLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAM  157 (252)
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCchHHHHH
Confidence            999999999998   666778888899999999999999999999999998763  799999999999999999999864

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=5.8e-26  Score=172.79  Aligned_cols=153  Identities=19%  Similarity=0.257  Sum_probs=115.8

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHH---------hhcCC-----cEEEEEeecC
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA---------REEKS-----QVFAIRIDCS   72 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~---------~~~~~-----~~~~~~~D~~   72 (167)
                      .+++|+++|||++  +|||+++|+.|+++|++|++.++.+ .++...+..+         ...+.     ++..+..|++
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            4579999999996  9999999999999999999976541 0111100000         00011     1111223333


Q ss_pred             CH------------------HHHHHHHHHHH-hcCCccEEEEcCCCCCCCC--CCCCCCCCHHHHHHHhhhhhHHHHHHH
Q 031016           73 DS------------------RSVREAFEGVL-SLGFVEVLVYNAYQPVSWQ--PTNFTEISFDSFQKSIAISSLGAFLCA  131 (167)
Q Consensus        73 ~~------------------~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~  131 (167)
                      ++                  ++++++++++. ++|++|++|||||.   ..  ..++.+.+.++|++.+++|+.++++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~---~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLAN---SPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCc---CcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            33                  35899999998 89999999999986   33  468889999999999999999999999


Q ss_pred             HHHHHhhHhcCCceEEEecCCccccCCCCcc-ccccC
Q 031016          132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS-ELCKN  167 (167)
Q Consensus       132 ~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~-~y~as  167 (167)
                      +.++|.|.++  |+||++||..+..+.|++. .|++|
T Consensus       161 ~a~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~as  195 (299)
T PRK06300        161 SHFGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSA  195 (299)
T ss_pred             HHHHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHH
Confidence            9999999763  7999999999998888875 78874

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.7e-25  Score=162.12  Aligned_cols=151  Identities=22%  Similarity=0.274  Sum_probs=133.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++|||++|+||+.++++|+++|++|++++|++++..+..+.+..   .....+.+|++|+++++++++++. .++
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA---DALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh---cCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999988777666665543   245677899999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++|++|+++|.   ....++.+.+.++++..+++|+.+++.+++.+.+.+.+++.++||++||..+..+.+++..|++
T Consensus        82 ~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  156 (239)
T PRK12828         82 RLDALVNIAGA---FVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAA  156 (239)
T ss_pred             CcCEEEECCcc---cCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHH
Confidence            99999999998   5666777889999999999999999999999999998877889999999999888888888875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=6.9e-26  Score=160.18  Aligned_cols=147  Identities=20%  Similarity=0.231  Sum_probs=130.9

Q ss_pred             CCcEEEEEcCC-CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH--hc
Q 031016           11 CRGIAAIVGVG-PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL--SL   87 (167)
Q Consensus        11 ~~~~~lItGa~-~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~   87 (167)
                      ..|.++|||++ ||||.+++++|.+.|+.|+.+.|..+...++...      ..+..+..|+++++++..+..++.  ..
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~------~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ------FGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh------hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            46889999986 8999999999999999999999988877665432      237888999999999999999998  67


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|.|+||||.   .=..|..+.+.++.+..|++|++|.++.+|++. ++.-+.+|+|||+.|..+..|+|.-+.|+||
T Consensus        80 Gkld~L~NNAG~---~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAs  155 (289)
T KOG1209|consen   80 GKLDLLYNNAGQ---SCTFPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSAS  155 (289)
T ss_pred             CceEEEEcCCCC---CcccccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHH
Confidence            999999999998   666788999999999999999999999999999 5555567999999999999999999999886

>PRK08324 short chain dehydrogenase; Validated

Probab=99.94  E-value=6.2e-25  Score=183.52  Aligned_cols=155  Identities=23%  Similarity=0.359  Sum_probs=140.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ..+.+|+++||||+|+||++++++|+++|++|++++|+.+.+++..+.+.. . .++.++.+|++++++++++++++. .
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~-~-~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG-P-DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc-c-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998888777776654 2 578899999999999999999988 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++++|++|||+|.   ....++.+.+.++|+..+++|+.+++.+++.+.+.|++++. |+||++||..+..+.+++.+|+
T Consensus       496 ~g~iDvvI~~AG~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~  572 (681)
T PRK08324        496 FGGVDIVVSNAGI---AISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYG  572 (681)
T ss_pred             cCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHH
Confidence            8999999999998   67788889999999999999999999999999999998764 8999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       573 as  574 (681)
T PRK08324        573 AA  574 (681)
T ss_pred             HH
Confidence            64

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.93  E-value=1.7e-24  Score=160.17  Aligned_cols=152  Identities=24%  Similarity=0.384  Sum_probs=131.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      |+++|||++++||++++++|+++|++|++. .|+++..++....+.. .+.++..+.+|++|+++++++++++. +++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999774 6777777777777665 56678899999999999999999998 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCC-cccccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAG-FSELCK  166 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~-~~~y~a  166 (167)
                      |++|||+|.  .....++.+.+.++|+..+++|+.+++.+++.+++.+.++.   .|+||++||..+..+.++ +..|++
T Consensus        81 d~vi~~ag~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~  158 (247)
T PRK09730         81 AALVNNAGI--LFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAA  158 (247)
T ss_pred             CEEEECCCC--CCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHh
Confidence            999999997  12445677889999999999999999999999999998753   478999999998888775 467876


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       159 s  159 (247)
T PRK09730        159 S  159 (247)
T ss_pred             H
Confidence            4

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.9e-25  Score=164.52  Aligned_cols=131  Identities=19%  Similarity=0.204  Sum_probs=113.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +|+++|||+ +|||++++++|+ +|++|++++|+++.+++..+.++. .+.++.++.+|++|+++++++++++.+++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE-AGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            689999998 699999999996 899999999998887777777765 56688999999999999999998876668999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ++|||||.   ..       +.++|++++++|+.+++++++.+.|.|.++  |++|++||.++..+
T Consensus        79 ~li~nAG~---~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~  132 (275)
T PRK06940         79 GLVHTAGV---SP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRL  132 (275)
T ss_pred             EEEECCCc---CC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccC
Confidence            99999997   32       236799999999999999999999999764  68899999988665

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.5e-24  Score=160.70  Aligned_cols=152  Identities=24%  Similarity=0.309  Sum_probs=133.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++++++|||++|+||+.++++|+++|++|++++|+++..+++.+....   .++.++.+|++++++++++++++. .++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG---AKVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999988776666555432   267889999999999999999998 789


Q ss_pred             CccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++|++||++|.   . +..+....+.++|+..+++|+.+++.+++.+.+.+.+.+. ++|+++||..+..+.+++..|++
T Consensus        86 ~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~  162 (264)
T PRK12829         86 GLDVLVNNAGI---AGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA  162 (264)
T ss_pred             CCCEEEECCCC---CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence            99999999998   5 5566778899999999999999999999999999887665 78999999998888888888875


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       163 ~  163 (264)
T PRK12829        163 S  163 (264)
T ss_pred             H
Confidence            3

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.7e-24  Score=159.97  Aligned_cols=152  Identities=25%  Similarity=0.376  Sum_probs=129.2

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      |+.++++++++++|||++++||+.+++.|+++|++|++++|+++..+++.+..      ...++.+|++++++++++++.
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHH
Confidence            44555678999999999999999999999999999999999887665544332      245678999999988887765


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcc
Q 031016           84 VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~  162 (167)
                         .+++|++|||+|.   ....+..+.+.++|+..+++|+.+++.+++.+.+.+.+++ .|+||++||..+..+.+++.
T Consensus        75 ---~~~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  148 (245)
T PRK07060         75 ---AGAFDGLVNCAGI---ASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHL  148 (245)
T ss_pred             ---hCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCc
Confidence               3789999999998   5666777789999999999999999999999999988664 47999999999999988888


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       149 ~y~~s  153 (245)
T PRK07060        149 AYCAS  153 (245)
T ss_pred             HhHHH
Confidence            88764

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.7e-24  Score=160.24  Aligned_cols=148  Identities=26%  Similarity=0.442  Sum_probs=129.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++|||++++||++++++|+++|++|++++|+++..+++.+.+   .+.++.++.+|++++++++++++++. +++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL---GDARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            588999999999999999999999999999999988777766655   23568899999999999999999988 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      |++||++|.   ....++.+.+.++|...+++|+.+++.+.+.+++.+.+++.++||++||..+..+ .++..|++
T Consensus        79 d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~  150 (257)
T PRK07074         79 DVLVANAGA---ARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSA  150 (257)
T ss_pred             CEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHH
Confidence            999999998   5566778889999999999999999999999999998887889999999776533 34556664

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=3e-24  Score=158.88  Aligned_cols=153  Identities=22%  Similarity=0.330  Sum_probs=131.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++++++|||++++||++++++|+++|++|++++|+ .+..+++.+.+....+..+.++.+|++++++++++++++. .++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999885 4445555555544234568899999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++||++|.   ....++.+.+.++++..+++|+.+++.+.+.+.|.+.++ .|.++++++..+..+.++...|++|
T Consensus        85 ~~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~s  159 (249)
T PRK09135         85 RLDALVNNASS---FYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAA  159 (249)
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHH
Confidence            99999999998   666777788889999999999999999999999998765 4789999988888888888888864

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=3.6e-24  Score=158.10  Aligned_cols=153  Identities=22%  Similarity=0.348  Sum_probs=133.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++||||+|+||++++++|+++|++|+++.|+. ...+.+.+.+.. .+.++.++.+|++++++++++++++. .++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA-LGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999987766544 445555555554 56678999999999999999999988 778


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++||++|.   ....++.+.+.++|+..+++|+.+++.+.+.+++.+.+.+.+++|++||..+..+.+++..|+.|
T Consensus        84 ~id~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~s  159 (249)
T PRK12825         84 RIDILVNNAGI---FEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAA  159 (249)
T ss_pred             CCCEEEECCcc---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHH
Confidence            99999999998   67778888899999999999999999999999999988877899999999998888888888753

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.93  E-value=3.6e-24  Score=157.54  Aligned_cols=149  Identities=26%  Similarity=0.346  Sum_probs=131.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEV   92 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~   92 (167)
                      ++|||++++||..++++|+++|++|++++|+. +..++..+.+.. .+.++.++.+|++|+++++++++++. .++++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA-YGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999998865 445555566655 56678999999999999999999988 8899999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +||++|.   ....++.+.+.++++..+++|+.+++.+++.+.+.+.+.+.+++|++||..+..+.+++..|+++
T Consensus        80 vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~  151 (239)
T TIGR01830        80 LVNNAGI---TRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAAS  151 (239)
T ss_pred             EEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHH
Confidence            9999998   56667778889999999999999999999999999987767899999999999998988888764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.93  E-value=2.6e-24  Score=159.77  Aligned_cols=150  Identities=27%  Similarity=0.381  Sum_probs=128.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh--HHHHHHHHHhhcC-CcEEEEEeecCC-HHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR--LSRFADEIAREEK-SQVFAIRIDCSD-SRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~   85 (167)
                      +.+|+++|||+++|||+++|+.|+++|++|++..++.+.  .++..+... ..+ ..+.+..+|+++ +++++.+++.+.
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999998888776553  334433333 122 368888899998 999999999999


Q ss_pred             -hcCCccEEEEcCCCCCCCCC-CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC-cc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG-FS  162 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~  162 (167)
                       .+|++|++|||||.   ... .++.+.+.++|++.+++|+.+++.+.+.+.|.+.++   +||++||..+. +.++ ++
T Consensus        82 ~~~g~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~  154 (251)
T COG1028          82 EEFGRIDILVNNAGI---AGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQA  154 (251)
T ss_pred             HHcCCCCEEEECCCC---CCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcc
Confidence             89999999999998   666 488999999999999999999999999888888843   99999999999 8777 49


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      +|++|
T Consensus       155 ~Y~~s  159 (251)
T COG1028         155 AYAAS  159 (251)
T ss_pred             hHHHH
Confidence            99875

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.93  E-value=5.2e-25  Score=162.90  Aligned_cols=142  Identities=31%  Similarity=0.485  Sum_probs=126.8

Q ss_pred             cCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc-CCccEEE
Q 031016           19 GVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL-GFVEVLV   94 (167)
Q Consensus        19 Ga~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~-~~i~~lv   94 (167)
                      |++  +|||+++|++|+++|++|++++|+.+.+++..+.+....+.+  ++.+|++++++++++++++. ++ |+||++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            556  999999999999999999999999998766666666545655  49999999999999999999 88 9999999


Q ss_pred             EcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           95 YNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        95 ~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||+|.   .+.    .++.+.+.++|+..+++|+.+++.++|.+.|.|.++  |+||++||..+..+.+++..|+++
T Consensus        79 ~~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~s  150 (241)
T PF13561_consen   79 NNAGI---SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSAS  150 (241)
T ss_dssp             EEEES---CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHH
T ss_pred             ecccc---cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHH
Confidence            99998   444    688889999999999999999999999999988875  799999999999999999999763

...

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.7e-24  Score=159.00  Aligned_cols=143  Identities=15%  Similarity=0.286  Sum_probs=122.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ++++||||++|||++++++|+++|++|++++|+++.++++.+     ...++.++.+|++++++++++++++.  ..+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT-----QSANIFTLAFDVTDHPGTKAALSQLP--FIPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----hcCCCeEEEeeCCCHHHHHHHHHhcc--cCCCE
Confidence            789999999999999999999999999999998776655443     23467889999999999999988764  24799


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|+|+|.   ....+..+.+.++|++++++|+.+++++.+.+.|.|.+  .+++|++||..+..+.+++..|++|
T Consensus        75 ~i~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~as  144 (240)
T PRK06101         75 WIFNAGD---CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGAS  144 (240)
T ss_pred             EEEcCcc---cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHH
Confidence            9999987   33344456788999999999999999999999999864  3689999999999999999999875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=2.5e-24  Score=158.37  Aligned_cols=141  Identities=21%  Similarity=0.227  Sum_probs=120.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++|+++|||++++||++++++|+++|++|++++|+....          ...++.++.+|++++  ++++++   ..+
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~--~~~~~~---~~~   66 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD----------LSGNFHFLQLDLSDD--LEPLFD---WVP   66 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc----------cCCcEEEEECChHHH--HHHHHH---hhC
Confidence            35689999999999999999999999999999999875421          134678899999987  444333   458


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   .. ..++.+.+.++|++.+++|+.+++.+++.+.|.+.+++.|+||++||..+..+.+++..|+++
T Consensus        67 ~id~lv~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  143 (235)
T PRK06550         67 SVDILCNTAGI---LDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTAS  143 (235)
T ss_pred             CCCEEEECCCC---CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHH
Confidence            99999999997   32 356778899999999999999999999999999988878999999999999998988889864

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.1e-24  Score=158.78  Aligned_cols=145  Identities=17%  Similarity=0.284  Sum_probs=124.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH-HH-hc---C
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG-VL-SL---G   88 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~-~~---~   88 (167)
                      +++|||++++||++++++|+++|++|++++|+.+..  .   ... .+.++.++.+|+++++++++++.+ +. .+   +
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            699999999999999999999999999999876531  1   112 455788999999999999997776 43 33   4


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   .. ..++.+.+.++|+..+++|+.+++.+.+.+.+.|.+++.|+||++||..+..+.+++..|++|
T Consensus        77 ~~~~~v~~ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  153 (243)
T PRK07023         77 SRVLLINNAGT---VEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCAT  153 (243)
T ss_pred             CceEEEEcCcc---cCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHH
Confidence            79999999997   33 357778899999999999999999999999999988777899999999999999999999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=4.1e-24  Score=171.19  Aligned_cols=149  Identities=17%  Similarity=0.220  Sum_probs=128.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++++|||++++||++++++|+++|++|++++++.  +.+.++.+.    .+  ...+.+|++++++++++++.+. +
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~----~~--~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR----VG--GTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH----cC--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999998853  223333222    22  3467899999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||+|.   ....++.+.+.++|+.++++|+.+++.+.+.+.+.+..++.++||++||..+..+.+++..|++
T Consensus       282 ~g~id~vi~~AG~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~a  358 (450)
T PRK08261        282 HGGLDIVVHNAGI---TRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAA  358 (450)
T ss_pred             CCCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHH
Confidence            8899999999998   6677888999999999999999999999999999766556689999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       359 s  359 (450)
T PRK08261        359 S  359 (450)
T ss_pred             H
Confidence            4

>PRK12742 oxidoreductase; Provisional

Probab=99.92  E-value=1e-23  Score=155.21  Aligned_cols=144  Identities=21%  Similarity=0.282  Sum_probs=119.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +++|+++|||++++||++++++|+++|++|+++.+ +++..+++.+.    .+  ...+.+|+++++++.+++++   .+
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~----~~--~~~~~~D~~~~~~~~~~~~~---~~   74 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE----TG--ATAVQTDSADRDAVIDVVRK---SG   74 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH----hC--CeEEecCCCCHHHHHHHHHH---hC
Confidence            46899999999999999999999999999988765 44444444332    22  45678999999988877654   47


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc-ccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS-LNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~~y~as  167 (167)
                      ++|++|||+|.   ....+..+.+.++|+..+++|+.+++.+++.+++.|.+  .|+||++||..+ ..+.+++..|++|
T Consensus        75 ~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~s  149 (237)
T PRK12742         75 ALDILVVNAGI---AVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAAS  149 (237)
T ss_pred             CCcEEEECCCC---CCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHh
Confidence            89999999998   55567778899999999999999999999999999864  479999999888 4577888899875

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=4.3e-24  Score=158.84  Aligned_cols=152  Identities=25%  Similarity=0.281  Sum_probs=142.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC-cEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS-QVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +.++|||+++|||+++|..+..+|++|.++.|+..+++++++.+.-..+. ++.+.++|+.|-+++...++++. ..+++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999988754333 48899999999999999999998 78999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |.+|+|||.   ..++-+++.+.++++..+++|+.+.++++++.++.|++.. .|+|+++||..+..|..|+++|++|
T Consensus       114 d~l~~cAG~---~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~s  188 (331)
T KOG1210|consen  114 DNLFCCAGV---AVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPS  188 (331)
T ss_pred             ceEEEecCc---ccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccH
Confidence            999999999   7889999999999999999999999999999999999987 6899999999999999999999975

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.9e-24  Score=158.27  Aligned_cols=149  Identities=19%  Similarity=0.281  Sum_probs=124.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC-
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF-   89 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~-   89 (167)
                      |+++|||++++||++++++|+++|++|++++|++ +.+.+..+   . .+.++.++.+|++++++++++++++. .++. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---Q-YNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---c-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            6899999999999999999999999999999976 33333222   2 35578899999999999999999886 5442 


Q ss_pred             -cc--EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccc
Q 031016           90 -VE--VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        90 -i~--~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                       ++  ++|+|+|.  ..+..++.+.+.++|...+++|+.+++.+++.++|.|.+.+ .++||++||..+..+.+++..|+
T Consensus        78 ~~~~~~~v~~ag~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  155 (251)
T PRK06924         78 NVSSIHLINNAGM--VAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYC  155 (251)
T ss_pred             cCCceEEEEccee--cccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHh
Confidence             22  89999997  23446788899999999999999999999999999998753 57999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       156 ~s  157 (251)
T PRK06924        156 SS  157 (251)
T ss_pred             HH
Confidence            64

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.6e-24  Score=154.07  Aligned_cols=145  Identities=20%  Similarity=0.208  Sum_probs=116.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh---hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL---GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|||+.|+||..++++|+++|. +|++++|+.   ....+..+.++. .+.++.++.+|++|+++++++++++. +++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES-AGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH-TT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh-CCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            799999999999999999999986 799999983   245577888877 78899999999999999999999999 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|+++||+||.   ..+.++.+.+.++++.++..++.+...+.+.+.+.    +-..+|++||.++..|.++++.|++
T Consensus        81 ~i~gVih~ag~---~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~----~l~~~i~~SSis~~~G~~gq~~Yaa  151 (181)
T PF08659_consen   81 PIDGVIHAAGV---LADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR----PLDFFILFSSISSLLGGPGQSAYAA  151 (181)
T ss_dssp             -EEEEEE----------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT----TTSEEEEEEEHHHHTT-TTBHHHHH
T ss_pred             Ccceeeeeeee---ecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC----CCCeEEEECChhHhccCcchHhHHH
Confidence            99999999999   77889999999999999999999999999988652    3359999999999999999999986

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.92  E-value=1.2e-23  Score=154.97  Aligned_cols=146  Identities=19%  Similarity=0.232  Sum_probs=126.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.+++++||||+|+||++++++|+++|+ +|++++|+.++.++        .+.++.++.+|++++++++++++..   
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~---   71 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEAA---   71 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHhc---
Confidence            35689999999999999999999999999 99999998765443        2457889999999999998877754   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++||++|..  ....++.+.+.++|.+.+++|+.+++.+.+.+.|.+++++.+++|++||..+..+.+++..|+++
T Consensus        72 ~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s  149 (238)
T PRK08264         72 SDVTILVNNAGIF--RTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSAS  149 (238)
T ss_pred             CCCCEEEECCCcC--CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHH
Confidence            7899999999972  23456778899999999999999999999999999988778899999999998888888888753

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.2e-23  Score=153.17  Aligned_cols=140  Identities=18%  Similarity=0.174  Sum_probs=121.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++|||++++||++++++|+++|++|++++|+.+.         . ..  ..++.+|++++++++++++++. .. +
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~-~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~   68 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------D-FP--GELFACDLADIEQTAATLAQINEIH-P   68 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------c-cC--ceEEEeeCCCHHHHHHHHHHHHHhC-C
Confidence            47899999999999999999999999999999997653         0 11  2467899999999999999888 54 6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||+|.   ....++.+.+.++|++.+++|+.+++.+.+.++|.|++++.|+||++||.. ..+.++..+|++|
T Consensus        69 ~d~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~s  142 (234)
T PRK07577         69 VDAIVNNVGI---ALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAA  142 (234)
T ss_pred             CcEEEECCCC---CCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHH
Confidence            8999999998   666788888999999999999999999999999999988788999999985 4566778888764

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=152.72  Aligned_cols=140  Identities=22%  Similarity=0.262  Sum_probs=121.2

Q ss_pred             EEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEEE
Q 031016           16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVY   95 (167)
Q Consensus        16 lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv~   95 (167)
                      +|||++++||++++++|+++|++|++++|+++.+++..+.++  .+.+++++.+|+++++++++++++.   +++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~---~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG--GGAPVRTAALDITDEAAVDAFFAEA---GPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHhc---CCCCEEEE
Confidence            599999999999999999999999999999877777666553  2457889999999999998888764   78999999


Q ss_pred             cCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           96 NAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+|.   ....++.+.+.+++++.+++|+.+++.+++  .+.+.  +.|+||++||..+..+.+++..|++|
T Consensus        76 ~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~s  140 (230)
T PRK07041         76 TAAD---TPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAI  140 (230)
T ss_pred             CCCC---CCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHH
Confidence            9998   666778888999999999999999999999  44443  35899999999999998988888864

>PRK08017 oxidoreductase; Provisional

Probab=99.91  E-value=6.4e-23  Score=152.57  Aligned_cols=146  Identities=21%  Similarity=0.247  Sum_probs=127.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h-cCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S-LGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~-~~~   89 (167)
                      .|+++|||++|+||++++++|+++|++|++++|+.++++.+.    . .  .+..+.+|+++.++++.+++.+. . .++
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~-~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S-L--GFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h-C--CCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            378999999999999999999999999999999887655432    1 2  36778999999999999998886 3 378


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|.+|+++|.   ....+..+.+.+++++.+++|+.+++.+.+.+++.+.+.+.++||++||..+..+.++...|++|
T Consensus        75 ~~~ii~~ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  149 (256)
T PRK08017         75 LYGLFNNAGF---GVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAAS  149 (256)
T ss_pred             CeEEEECCCC---CCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHH
Confidence            9999999998   55677888899999999999999999999999999998877899999999999888888888864

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=150.17  Aligned_cols=127  Identities=20%  Similarity=0.275  Sum_probs=114.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++|||+++|||++++++|+++ ++|++++|+..                  .+.+|++++++++++++++   +++|++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~---~~id~l   59 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEKV---GKVDAV   59 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHhc---CCCCEE
Confidence            5899999999999999999999 99999998643                  3579999999999888764   789999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |||+|.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.++  |+|+++||..+..+.+++..|++|
T Consensus        60 v~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~~~~~~~Y~~s  128 (199)
T PRK07578         60 VSAAGK---VHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEPIPGGASAATV  128 (199)
T ss_pred             EECCCC---CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCCCCCchHHHHH
Confidence            999998   566788889999999999999999999999999999753  799999999999999999999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.5e-23  Score=151.68  Aligned_cols=139  Identities=22%  Similarity=0.224  Sum_probs=111.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++||||++|||+++++.|+++|++|++++|+.++++++.+.+      .+..+.+|++++++++++++++.  +++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~--~~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFP--HHLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHh--hcCcEE
Confidence            3899999999999999999999999999999887776655443      24678899999999999888763  369999


Q ss_pred             EEcCCCCCCC---CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           94 VYNAYQPVSW---QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        94 v~~ag~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |||+|.....   ...++.+ +.++|++++++|+.+++++++.++|.|.+  .|+||++||..    .+++..|++|
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~as  143 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAI  143 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHH
Confidence            9999852100   0112333 57899999999999999999999999965  48999999976    3556788764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.1e-22  Score=149.73  Aligned_cols=149  Identities=18%  Similarity=0.220  Sum_probs=125.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++|||++++||.++++.|+++|++|++++|+++..+++.+.+.. . .++.++.+|++++++++++++++. .++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK-Y-GNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-c-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999998877766565543 2 368889999999999999999988 788


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc-CCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN-GIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~y~as  167 (167)
                      ++|.+|+++|.   ....+..+  .++++.++++|+.+++.+.+.++|.+.+  .|++|++||..+.. +.+.+..|++|
T Consensus        81 ~id~ii~~ag~---~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~s  153 (238)
T PRK05786         81 AIDGLVVTVGG---YVEDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVA  153 (238)
T ss_pred             CCCEEEEcCCC---cCCCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHH
Confidence            99999999987   44444433  3899999999999999999999999865  37999999987743 55677778764

>PRK06720 hypothetical protein; Provisional

Probab=99.90  E-value=3.8e-22  Score=140.20  Aligned_cols=141  Identities=15%  Similarity=0.176  Sum_probs=118.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+.+.. .+.+..++.+|++++++++++++++. +
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN-LGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999999999988877777777765 56678889999999999999999988 8


Q ss_pred             cCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-------CceEEEecCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-------KGTIIFTGCSASL  155 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~iss~~~~  155 (167)
                      +|++|++|||||.   .. ..++.+.+.++++   .+|+.+++.+++.+.+.|.+++       .|++..||+.+..
T Consensus        91 ~G~iDilVnnAG~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         91 FSRIDMLFQNAGL---YKIDSIFSRQQENDSN---VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             cCCCCEEEECCCc---CCCCCcccccchhHhh---ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            8999999999998   44 3455555555533   7788888999999999988764       4899999887654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.90  E-value=7.9e-24  Score=145.51  Aligned_cols=155  Identities=24%  Similarity=0.320  Sum_probs=132.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +.++-+++|||+.+|+|++.+++|+.+|++|++.+-+.++-.+..++    .+.++.+.+.|+|++++++.++...+ ++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake----lg~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE----LGGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH----hCCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            34788999999999999999999999999999998877766555555    57789999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCC---CCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc------CCceEEEecCCccccCC
Q 031016           88 GFVEVLVYNAYQPVS---WQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER------GKGTIIFTGCSASLNGI  158 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~  158 (167)
                      |++|.+|||||+-.-   +....-...+.|++++++++|+.++|++++.-...|-+.      ++|-||+..|+++..+-
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence            999999999997210   011122456789999999999999999999988888653      25899999999999999


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      .++++|++|
T Consensus       162 ~gqaaysas  170 (260)
T KOG1199|consen  162 TGQAAYSAS  170 (260)
T ss_pred             cchhhhhcc
Confidence            999999987

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.1e-22  Score=149.54  Aligned_cols=139  Identities=17%  Similarity=0.129  Sum_probs=105.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.....+  ...   .. ....+.+|+++.+++++.      +++
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~~---~~-~~~~~~~D~~~~~~~~~~------~~~   79 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SND---ES-PNEWIKWECGKEESLDKQ------LAS   79 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hhc---cC-CCeEEEeeCCCHHHHHHh------cCC
Confidence            468999999999999999999999999999999987632111  111   11 225678999999876532      368


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc---CCceEEEecCCccccCCCCcccccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER---GKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|++|||||.   ..   ..+.+.++|++.+++|+.+++++++.++|.|.++   +++.+++.||.++..+ ++...|++
T Consensus        80 iDilVnnAG~---~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~a  152 (245)
T PRK12367         80 LDVLILNHGI---NP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEI  152 (245)
T ss_pred             CCEEEECCcc---CC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHH
Confidence            9999999997   32   2346789999999999999999999999999763   2334555566655544 46677987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       153 S  153 (245)
T PRK12367        153 S  153 (245)
T ss_pred             H
Confidence            5

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=2.2e-22  Score=141.03  Aligned_cols=147  Identities=18%  Similarity=0.182  Sum_probs=123.4

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHH---HHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRF---ADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      |+++|||++++||++++++|+++|+ .|++.+|+++..+..   .+.++. .+.++.++.+|+++++++++++.++. .+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999997 577778865443322   344444 56688899999999999999999988 78


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|.+||++|.   ....++.+.+.++++..+++|+.+++.+.+.+.+    .+.+++|++||..+..+.+++..|+++
T Consensus        80 ~~id~li~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~s  152 (180)
T smart00822       80 GPLRGVIHAAGV---LDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAA  152 (180)
T ss_pred             CCeeEEEEcccc---CCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHH
Confidence            999999999998   5566778889999999999999999999998842    345799999999999898888888763

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.90  E-value=4.6e-22  Score=141.89  Aligned_cols=153  Identities=20%  Similarity=0.213  Sum_probs=122.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHc-CCeEEE-EecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h--
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHE-GYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S--   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~--   86 (167)
                      .|.++||||..|||+.++++|.+. |-++++ .+|+++.+.+..+.... ...+++.++.|+++.+++++++.++. -  
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~-~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK-SDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc-cCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            466999999999999999999974 666544 57778775333333322 46689999999999999999999998 3  


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-----------CceEEEecCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-----------KGTIIFTGCSASL  155 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----------~g~iv~iss~~~~  155 (167)
                      ...+++|+||||+.  .+.......+.+.|.+.+++|..+|+.+.|.|+|++++..           ++.|||+||.++.
T Consensus        82 ~~GlnlLinNaGi~--~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   82 SDGLNLLINNAGIA--LSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cCCceEEEecccee--eecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence            45899999999993  3445666777899999999999999999999999998753           2489999999987


Q ss_pred             cCC---CCccccccC
Q 031016          156 NGI---AGFSELCKN  167 (167)
Q Consensus       156 ~~~---~~~~~y~as  167 (167)
                      ++.   .++.+|..|
T Consensus       160 ~~~~~~~~~~AYrmS  174 (249)
T KOG1611|consen  160 IGGFRPGGLSAYRMS  174 (249)
T ss_pred             cCCCCCcchhhhHhh
Confidence            664   346777654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.89  E-value=1.7e-22  Score=184.23  Aligned_cols=148  Identities=10%  Similarity=0.089  Sum_probs=127.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecCh-------------------------------------------
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDL-------------------------------------------   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~-------------------------------------------   46 (167)
                      .+++++||||++|||.+++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5799999999999999999999998 69999999872                                           


Q ss_pred             ----hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhh
Q 031016           47 ----GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIA  121 (167)
Q Consensus        47 ----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~  121 (167)
                          ....+..+.++. .+.++.++.+|++|.++++++++++. + ++||++|||||+   ....++.+.+.++|+++++
T Consensus      2076 ~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv---~~~~~i~~~t~e~f~~v~~ 2150 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGV---LADKHIQDKTLEEFNAVYG 2150 (2582)
T ss_pred             cchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCcc---CCCCCcccCCHHHHHHHHH
Confidence                011122333444 57789999999999999999999998 6 689999999999   6778899999999999999


Q ss_pred             hhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016          122 ISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus       122 ~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|+.|++.+++.+.+.+.    ++||++||.++..|.++++.|+++
T Consensus      2151 ~nv~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaA 2192 (2582)
T TIGR02813      2151 TKVDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMS 2192 (2582)
T ss_pred             HHHHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHH
Confidence            999999999999876543    489999999999999999999874

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-22  Score=148.63  Aligned_cols=146  Identities=17%  Similarity=0.201  Sum_probs=116.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +.+|+++|||++++||++++++|+++|++|++++|+.+ ..+.+.+.++. .+.++.++.+|++++++++++++++. ++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45799999999999999999999999999999988753 45556666655 55678899999999999999999988 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-----cCCCCcc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-----NGIAGFS  162 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----~~~~~~~  162 (167)
                      +++|++|||+|.   ....   .   .+++..+++|+.+++.+++.+.|.|.+  .+++|++||..+.     .+.+.+.
T Consensus        83 ~~~d~vi~~ag~---~~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~  151 (248)
T PRK07806         83 GGLDALVLNASG---GMES---G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYE  151 (248)
T ss_pred             CCCcEEEECCCC---CCCC---C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCcccc
Confidence            899999999987   3221   1   125678999999999999999999854  3699999996543     2334456


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       152 ~Y~~s  156 (248)
T PRK07806        152 PVARS  156 (248)
T ss_pred             HHHHH
Confidence            67653

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.89  E-value=3.5e-22  Score=147.02  Aligned_cols=143  Identities=13%  Similarity=0.163  Sum_probs=113.5

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ++++|||+++|||++++++|+++|  ..|++..|+....      .   ...++.++.+|++++++++++.++   ++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~---~~~~~~~~~~Dls~~~~~~~~~~~---~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F---QHDNVQWHALDVTDEAEIKQLSEQ---FTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c---ccCceEEEEecCCCHHHHHHHHHh---cCCC
Confidence            369999999999999999999985  4666666654321      1   235788999999999999885544   5899


Q ss_pred             cEEEEcCCCCCCC---CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc---CCCCcccc
Q 031016           91 EVLVYNAYQPVSW---QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN---GIAGFSEL  164 (167)
Q Consensus        91 ~~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---~~~~~~~y  164 (167)
                      |++|||+|.....   +..++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++++++||..+..   +.+++..|
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y  148 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSY  148 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchh
Confidence            9999999983210   13457788999999999999999999999999999887678999999876643   34677888


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       149 ~as  151 (235)
T PRK09009        149 RAS  151 (235)
T ss_pred             hhh
Confidence            875

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.1e-22  Score=144.35  Aligned_cols=143  Identities=23%  Similarity=0.363  Sum_probs=122.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .|+++||||+|+||+++++.|+++ ++|++++|+.+..+++.+..     ..+.++.+|++|++++++++.++   +++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~---~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQL---GRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhc---CCCC
Confidence            578999999999999999999999 99999999876655443322     24778899999999998887754   5899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++||++|.   ....+..+.+.++|...+++|+.+++.+.+.+++.+.++ .+++|++||..+..+.+++..|+++
T Consensus        74 ~vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~  145 (227)
T PRK08219         74 VLVHNAGV---ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAAS  145 (227)
T ss_pred             EEEECCCc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHH
Confidence            99999998   566677788999999999999999999999999998876 4799999999998888888888653

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.2e-22  Score=145.01  Aligned_cols=146  Identities=13%  Similarity=0.167  Sum_probs=118.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |+++|||++++||++++++|+++|++|++++|+++..+++.+     . .++.++.+|++|+++++++++.+. .+++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~-~~~~~~~~D~~d~~~~~~~~~~~~-~~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-----L-PGVHIEKLDMNDPASLDQLLQRLQ-GQRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-----c-cccceEEcCCCCHHHHHHHHHHhh-cCCCCE
Confidence            789999999999999999999999999999998776544321     1 246778899999999999988775 247999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC---CCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI---AGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~~~~~y~as  167 (167)
                      +|||+|... ....++.+.+.++++..+++|+.+++.+.+.+.|.+.+. .+.++++||..+..+.   .++..|++|
T Consensus        75 vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~s  150 (225)
T PRK08177         75 LFVNAGISG-PAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKAS  150 (225)
T ss_pred             EEEcCcccC-CCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHH
Confidence            999999811 123456788999999999999999999999999998754 4799999998876543   356678753

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.89  E-value=1.3e-21  Score=153.98  Aligned_cols=142  Identities=15%  Similarity=0.136  Sum_probs=110.3

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++++|+++||||+||||++++++|+++|++|++++|+++++.+..   .. ...++..+.+|++|++++++.+      
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~-~~~~v~~v~~Dvsd~~~v~~~l------  243 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NG-EDLPVKTLHWQVGQEAALAELL------  243 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hh-cCCCeEEEEeeCCCHHHHHHHh------
Confidence            4567899999999999999999999999999999999876543322   22 2335678899999998775433      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC----ceEEEecCCccccCCCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK----GTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~iv~iss~~~~~~~~~~~~  163 (167)
                      +++|++|||||.   ...   .+.+.|++++.+++|+.+++.+++.++|.|++++.    +.+|++|+ ++. +.+..+.
T Consensus       244 ~~IDiLInnAGi---~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~~  315 (406)
T PRK07424        244 EKVDILIINHGI---NVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSPL  315 (406)
T ss_pred             CCCCEEEECCCc---CCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCchH
Confidence            579999999998   322   36788999999999999999999999999987642    45666664 333 3344567


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       316 Y~AS  319 (406)
T PRK07424        316 YELS  319 (406)
T ss_pred             HHHH
Confidence            8875

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.4e-21  Score=141.67  Aligned_cols=145  Identities=19%  Similarity=0.172  Sum_probs=116.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |+++|||++++||++++++|+++|++|++++|+++..+++.    . .  .+.++.+|++++++++++++++. .+++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~-~--~~~~~~~D~~~~~~v~~~~~~~~-~~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----A-L--GAEALALDVADPASVAGLAWKLD-GEALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----h-c--cceEEEecCCCHHHHHHHHHHhc-CCCCCE
Confidence            67999999999999999999999999999999876654432    2 2  35678999999999998877653 247999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc---cccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF---SELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~---~~y~as  167 (167)
                      +|||+|..+ ....+..+.+.++|+..+++|+.+++.+++.+.|.|.++ .|++|++||..+..+....   ..|++|
T Consensus        74 vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~s  149 (222)
T PRK06953         74 AVYVAGVYG-PRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRAS  149 (222)
T ss_pred             EEECCCccc-CCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHh
Confidence            999999821 123456677899999999999999999999999988664 5899999998876664332   247653

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=7.1e-22  Score=140.97  Aligned_cols=153  Identities=13%  Similarity=0.147  Sum_probs=118.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEE--EecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+|++|+||++.|||..++..+.+.+-....  ..|....+    +.+....+......-.|++...-....++..+ +.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~----~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAEL----EGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccc----cceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            5789999999999999999888877644333  33333221    11111133344445568887777778777777 78


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++.|++|||||.+........+..+.++|+++|+.|+++++.+.+.++|.+++++ .+.+||+||.++..|+++|++||+
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~  160 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCS  160 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhh
Confidence            8999999999984332223345788999999999999999999999999999985 789999999999999999999997


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       161 ~  161 (253)
T KOG1204|consen  161 S  161 (253)
T ss_pred             h
Confidence            5

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.85  E-value=6.6e-20  Score=132.95  Aligned_cols=143  Identities=17%  Similarity=0.253  Sum_probs=123.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC-----CeEEEEecChhhHHHHHHHHHhhcC---CcEEEEEeecCCHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG-----YTVAILARDLGRLSRFADEIAREEK---SQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      .+|+++|||+++|+|.++|++|++.-     .++++.+|+-++.++.+..++..++   .++.++.+|+++..++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            47999999999999999999999853     2467789999999999999987544   368999999999999999999


Q ss_pred             HHH-hcCCccEEEEcCCCCCCCCCCC---------------------------CCCCCHHHHHHHhhhhhHHHHHHHHHH
Q 031016           83 GVL-SLGFVEVLVYNAYQPVSWQPTN---------------------------FTEISFDSFQKSIAISSLGAFLCAQQV  134 (167)
Q Consensus        83 ~~~-~~~~i~~lv~~ag~~~~~~~~~---------------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~  134 (167)
                      ++. +++++|.++.|||+   ++...                           ....+.+++...|++|++|+|.+.+.+
T Consensus        82 di~~rf~~ld~iylNAg~---~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l  158 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGI---MPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIREL  158 (341)
T ss_pred             HHHHHhhhccEEEEcccc---CCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhh
Confidence            999 99999999999998   33321                           124567889999999999999999999


Q ss_pred             HHhhHhcCCceEEEecCCcccc
Q 031016          135 LSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus       135 ~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      .|.+..+....+|.+||..+..
T Consensus       159 ~pll~~~~~~~lvwtSS~~a~k  180 (341)
T KOG1478|consen  159 EPLLCHSDNPQLVWTSSRMARK  180 (341)
T ss_pred             hhHhhcCCCCeEEEEeeccccc
Confidence            9999987766999999988743

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.79  E-value=1.7e-17  Score=118.88  Aligned_cols=147  Identities=19%  Similarity=0.222  Sum_probs=126.5

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+.||+.||+|-.  .+|+..+|+.|.++|+++..++.++ ++++-.+++.+ .-.....++||+++.++++++++++. 
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~-~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAE-ELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHh-hccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            4579999999986  7999999999999999999998877 55555556655 23336779999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++|++|++||+-++   .+    .+.+.+.+.|.|...+++..++...+++++.|.|.+  +|+||.++-..+....|.+
T Consensus        81 ~~g~lD~lVHsIaF---a~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnY  155 (259)
T COG0623          81 KWGKLDGLVHSIAF---APKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNY  155 (259)
T ss_pred             hhCcccEEEEEecc---CChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCC
Confidence            99999999999998   44    346778999999999999999999999999999987  5899999998887777765


Q ss_pred             c
Q 031016          162 S  162 (167)
Q Consensus       162 ~  162 (167)
                      -
T Consensus       156 N  156 (259)
T COG0623         156 N  156 (259)
T ss_pred             c
Confidence            3

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.76  E-value=2.9e-17  Score=126.42  Aligned_cols=130  Identities=16%  Similarity=0.146  Sum_probs=101.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+|+++||||+|+||++++++|+++|++|++++|+.....+....+... ...++.++.+|++++++++++++      +
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~   77 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------G   77 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc------C
Confidence            4799999999999999999999999999998888876544433222210 12468889999999998887765      4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      +|++||+||.   ...    ..+.+++...+++|+.+++.+++++.+.+   +.++||++||..+..
T Consensus        78 ~d~vih~A~~---~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~  134 (325)
T PLN02989         78 CETVFHTASP---VAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVL  134 (325)
T ss_pred             CCEEEEeCCC---CCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhhee
Confidence            7999999997   321    23345678899999999999999988754   236999999986643

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.75  E-value=7.1e-17  Score=124.47  Aligned_cols=133  Identities=14%  Similarity=0.087  Sum_probs=100.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++|+++||||+|+||++++++|+++|  ++|++++|+.....++.+.+   ...++.++.+|++|++.+.+++.      
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---PAPCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHh------
Confidence            57899999999999999999999986  68998988765544433332   22468899999999999887765      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++|++||+||.   .. .+..+.+   ....+++|+.+++++++++.+.    +.++||++||.....|   ...|++
T Consensus        74 ~iD~Vih~Ag~---~~-~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~----~~~~iV~~SS~~~~~p---~~~Y~~  137 (324)
T TIGR03589        74 GVDYVVHAAAL---KQ-VPAAEYN---PFECIRTNINGAQNVIDAAIDN----GVKRVVALSTDKAANP---INLYGA  137 (324)
T ss_pred             cCCEEEECccc---CC-CchhhcC---HHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEeCCCCCCC---CCHHHH
Confidence            48999999997   32 2222333   3468999999999999998752    3469999999765443   345654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.74  E-value=8.5e-17  Score=125.11  Aligned_cols=127  Identities=11%  Similarity=0.003  Sum_probs=98.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.....+..+.+.  ...++.++.+|+++.+++++++++.    ++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~----~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEF----KP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhc----CC
Confidence            47899999999999999999999999999999987665443333332  2335778899999999998888864    68


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      |++||+|+.   ..    ...+.+++...+++|+.+++.+++++.+.   ...+++|++||..
T Consensus        77 d~vih~A~~---~~----~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~  129 (349)
T TIGR02622        77 EIVFHLAAQ---PL----VRKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDK  129 (349)
T ss_pred             CEEEECCcc---cc----cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechh
Confidence            999999986   21    13345667788999999999999987432   1135999999964

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.71  E-value=4.9e-16  Score=125.93  Aligned_cols=127  Identities=12%  Similarity=0.122  Sum_probs=100.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh--------cCCcEEEEEeecCCHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--------EKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      ..+|+++||||+|+||++++++|+++|++|++++|+.++++.+.+.+...        ...++.++.+|+++.+++++.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            36899999999999999999999999999999999988877766654321        1135889999999998876533


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           82 EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        82 ~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                            +++|++|||+|.   ...      ...+|...+++|+.+..++++++.+    .+.++||++||..+.
T Consensus       158 ------ggiDiVVn~AG~---~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~  212 (576)
T PLN03209        158 ------GNASVVICCIGA---SEK------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTN  212 (576)
T ss_pred             ------cCCCEEEEcccc---ccc------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhc
Confidence                  578999999997   321      1124778899999999998888753    345799999998763

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.71  E-value=2.8e-16  Score=121.74  Aligned_cols=132  Identities=20%  Similarity=0.185  Sum_probs=98.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-----HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-----LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      ..++|+++||||+|+||.+++++|+++|++|++++|++..     ++.+.+.... .+.++.++.+|++|.++++++++.
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHP-NKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccccc-ccCceEEEEecCCCHHHHHHHHHH
Confidence            3468899999999999999999999999999999886532     2222111111 234688999999999999988886


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCC
Q 031016           84 VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCS  152 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~  152 (167)
                      .    ++|++||+|+.   ....    ...+..+..+++|+.++..+++.+.+...+++. -++|++||.
T Consensus        82 ~----~~d~Vih~A~~---~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~  140 (340)
T PLN02653         82 I----KPDEVYNLAAQ---SHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSS  140 (340)
T ss_pred             c----CCCEEEECCcc---cchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccH
Confidence            4    58999999997   3221    223455777899999999999999887654311 278888875

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.68  E-value=1.8e-15  Score=121.15  Aligned_cols=134  Identities=16%  Similarity=0.097  Sum_probs=98.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh---h----H---------HHHHHHHHhhcCCcEEEEEeecC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG---R----L---------SRFADEIAREEKSQVFAIRIDCS   72 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~D~~   72 (167)
                      ..++++++||||+|.||++++++|+++|++|+++++...   .    .         .+-.+.+....+.++.++.+|++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            357899999999999999999999999999999864211   0    0         01111111112346889999999


Q ss_pred             CHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           73 DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        73 ~~~~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      |.+.+++++++.    ++|.+||+|+.   . ..+....+.++++..+++|+.+++++++.+...-.   ..++|++||.
T Consensus       124 d~~~v~~~l~~~----~~D~ViHlAa~---~-~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---~~~~V~~SS~  192 (442)
T PLN02572        124 DFEFLSEAFKSF----EPDAVVHFGEQ---R-SAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---DCHLVKLGTM  192 (442)
T ss_pred             CHHHHHHHHHhC----CCCEEEECCCc---c-cChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEecc
Confidence            999999888863    68999999975   2 23344455567788899999999999998764321   2489999987


Q ss_pred             c
Q 031016          153 A  153 (167)
Q Consensus       153 ~  153 (167)
                      .
T Consensus       193 ~  193 (442)
T PLN02572        193 G  193 (442)
T ss_pred             e
Confidence            5

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.67  E-value=2.3e-15  Score=120.25  Aligned_cols=136  Identities=17%  Similarity=0.191  Sum_probs=115.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++|+++||||+|+||.++|+++++.+. ++++.+|++.++..+..++....+ .++.++.+|+.|.+.++++++..   
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~---  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH---  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence            4799999999999999999999999876 788899999999999888877544 67999999999999999999864   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                       ++|+++|.|+.    ...|+-+..   ..+.+.+|++|+.++++++...-.+    ++|+||+-.+..|..-
T Consensus       325 -kvd~VfHAAA~----KHVPl~E~n---P~Eai~tNV~GT~nv~~aa~~~~V~----~~V~iSTDKAV~PtNv  385 (588)
T COG1086         325 -KVDIVFHAAAL----KHVPLVEYN---PEEAIKTNVLGTENVAEAAIKNGVK----KFVLISTDKAVNPTNV  385 (588)
T ss_pred             -CCceEEEhhhh----ccCcchhcC---HHHHHHHhhHhHHHHHHHHHHhCCC----EEEEEecCcccCCchH
Confidence             79999999987    445655544   4556899999999999998765444    9999999998877543

>PLN02583 cinnamoyl-CoA reductase

Probab=99.67  E-value=3.3e-15  Score=113.92  Aligned_cols=127  Identities=13%  Similarity=0.129  Sum_probs=95.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh--HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR--LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.+.  ..+....+.. .+.++.++.+|++|.+++..++.      
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC-EEERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc-CCCceEEEEecCCCHHHHHHHHc------
Confidence            46899999999999999999999999999999885432  2222333321 23468889999999988876655      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      ..|.+++.++.   ...     .+ ++++..+++|+.+++.+++++.+.+   +.++||++||..+..
T Consensus        78 ~~d~v~~~~~~---~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~  133 (297)
T PLN02583         78 GCSGLFCCFDP---PSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVI  133 (297)
T ss_pred             CCCEEEEeCcc---CCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHhee
Confidence            46888877654   111     11 2467899999999999999988754   235999999987653

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.66  E-value=4e-15  Score=115.17  Aligned_cols=128  Identities=16%  Similarity=0.197  Sum_probs=95.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH--HHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD--EIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ++.+++++||||+|.||+.++++|+++|++|+++.|+.........  .+..  ..++.++.+|++|++++.+++.    
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE--LGDLKIFGADLTDEESFEAPIA----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC--CCceEEEEcCCCChHHHHHHHh----
Confidence            4568999999999999999999999999999888887654332221  1111  1358889999999988877665    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                        ++|.+||+|+.   ..   ..  ..+.+...+++|+.++..+++++.+..   +.++||++||.+..
T Consensus        80 --~~d~vih~A~~---~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~  135 (338)
T PLN00198         80 --GCDLVFHVATP---VN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAV  135 (338)
T ss_pred             --cCCEEEEeCCC---Cc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceee
Confidence              47999999986   21   11  123345678999999999999986532   23599999997643

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.66  E-value=2.4e-15  Score=114.02  Aligned_cols=130  Identities=15%  Similarity=0.108  Sum_probs=104.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH--HHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR--FADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .++.|+||||+|.||..++++|+++||+|..+.|+++..++  .++.+.. ...++..+..|++|+++++.+++      
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~-a~~~l~l~~aDL~d~~sf~~ai~------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG-AKERLKLFKADLLDEGSFDKAID------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc-CcccceEEeccccccchHHHHHh------
Confidence            57899999999999999999999999999999999887554  3555544 44569999999999999999988      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      ..|+++|+|..   ...... +    --.+++++.+.|+..+++++...=   .--|||+.||.++..+.
T Consensus        78 gcdgVfH~Asp---~~~~~~-~----~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~  136 (327)
T KOG1502|consen   78 GCDGVFHTASP---VDFDLE-D----PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYN  136 (327)
T ss_pred             CCCEEEEeCcc---CCCCCC-C----cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccC
Confidence            47999999976   222111 1    123679999999999999987543   12399999999988764

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.66  E-value=1.2e-14  Score=112.81  Aligned_cols=144  Identities=13%  Similarity=0.105  Sum_probs=102.9

Q ss_pred             CCcEEEEEcCCCchhHH--HHHHHHHcCCeEEEEecChhh------------HHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016           11 CRGIAAIVGVGPNLGRS--IARKFAHEGYTVAILARDLGR------------LSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~--~a~~l~~~g~~v~~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      .+|++||||+++|+|.+  +++.| ++|++|+++++..+.            .+.+.+.++. .+.++..+.+|++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~-~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA-AGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHH
Confidence            57999999999999999  89999 999998888753322            1223444444 56678889999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCCCCCC-----------------C-----------------CCCCHHHHHHHhh
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSWQPTN-----------------F-----------------TEISFDSFQKSIA  121 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~-----------------~-----------------~~~~~~~~~~~~~  121 (167)
                      ++++++++. ++|+||+||||+|.   .....                 +                 ...+.++++.++.
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~---~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~  194 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLAS---PRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK  194 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcc---CCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH
Confidence            999999999 89999999999998   21111                 1                 1345566666555


Q ss_pred             hhhHHHH-HH--HHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016          122 ISSLGAF-LC--AQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus       122 ~n~~~~~-~l--~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +.=.--+ .+  .+...+.|.+  ++++|.+|...+....|.+
T Consensus       195 vMggedw~~Wi~al~~a~lla~--g~~~va~TY~G~~~t~p~Y  235 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLAE--GAKTVAYSYIGPELTHPIY  235 (398)
T ss_pred             hhccchHHHHHHHHHhcccccC--CcEEEEEecCCcceeeccc
Confidence            4433222 22  3444555543  5899999998877766654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.66  E-value=2.5e-15  Score=116.60  Aligned_cols=129  Identities=18%  Similarity=0.175  Sum_probs=93.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-----HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-----LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      |+++||||+|.||.+++++|+++|++|++++|+.+.     +..+.+.+....+.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            579999999999999999999999999999987542     222211111101346889999999999998888864   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       ++|++||+|+.   ....    ...+.-...+++|+.++..+++++.+.-.++ ..++|++||..
T Consensus        78 -~~d~ViH~Aa~---~~~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~-~~~~v~~SS~~  134 (343)
T TIGR01472        78 -KPTEIYNLAAQ---SHVK----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIK-SVKFYQASTSE  134 (343)
T ss_pred             -CCCEEEECCcc---cccc----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCc-CeeEEEeccHH
Confidence             58999999997   3221    1122335677889999999999987642111 13799999864

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.65  E-value=4.5e-16  Score=115.26  Aligned_cols=101  Identities=20%  Similarity=0.153  Sum_probs=84.1

Q ss_pred             HHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCC
Q 031016           28 IARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTN  107 (167)
Q Consensus        28 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~  107 (167)
                      +|++|+++|++|++++|+.+..+     +       ..++.+|+++.++++++++++.  +++|++|||||.   ...  
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-------~~~~~~Dl~~~~~v~~~~~~~~--~~iD~li~nAG~---~~~--   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L-------DGFIQADLGDPASIDAAVAALP--GRIDALFNIAGV---PGT--   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h-------hHhhcccCCCHHHHHHHHHHhc--CCCeEEEECCCC---CCC--
Confidence            47899999999999999876531     0       2356899999999999988763  689999999998   321  


Q ss_pred             CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016          108 FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus       108 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                            ++++..+++|+.+++.+++.++|.|.+  .|+||++||..+.
T Consensus        62 ------~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~  101 (241)
T PRK12428         62 ------APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGA  101 (241)
T ss_pred             ------CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhh
Confidence                  358899999999999999999999865  3799999999886

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.65  E-value=3.6e-15  Score=116.05  Aligned_cols=127  Identities=13%  Similarity=0.113  Sum_probs=92.6

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEE-EecChhh--HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGR--LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~-~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ++++||||+|.||.+++++|+++|+++++ .++....  ..... .+.  ...++.++.+|++|.+++++++++.    +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PVA--QSERFAFEKVDICDRAELARVFTEH----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hcc--cCCceEEEECCCcChHHHHHHHhhc----C
Confidence            57999999999999999999999987554 4543221  11111 110  2236778899999999998887752    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhH---h--cCCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV---E--RGKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~g~iv~iss~~  153 (167)
                      +|++||+||.   ...    +.+.++++..+++|+.+++.+++.+.+.+.   .  .+..++|++||..
T Consensus        75 ~D~Vih~A~~---~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~  136 (355)
T PRK10217         75 PDCVMHLAAE---SHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE  136 (355)
T ss_pred             CCEEEECCcc---cCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh
Confidence            8999999987   321    233467789999999999999999987532   1  1224899999854

>PLN02240 UDP-glucose 4-epimerase

Probab=99.65  E-value=9.2e-15  Score=113.56  Aligned_cols=131  Identities=11%  Similarity=0.090  Sum_probs=96.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      |++++|+++||||+|++|.+++++|+++|++|++++|......+..+.+...   .+.++.++.+|+++++++++++++.
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            3456899999999999999999999999999999987543222221222110   2346788999999999998887752


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                          ++|.+||+|+.   ....    .+.+++...+++|+.++..+++++.    +.+..++|++||..
T Consensus        81 ----~~d~vih~a~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~  134 (352)
T PLN02240         81 ----RFDAVIHFAGL---KAVG----ESVAKPLLYYDNNLVGTINLLEVMA----KHGCKKLVFSSSAT  134 (352)
T ss_pred             ----CCCEEEEcccc---CCcc----ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEccHH
Confidence                69999999987   3221    2335677899999999999988653    33335899999853

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.65  E-value=9e-15  Score=113.92  Aligned_cols=132  Identities=18%  Similarity=0.223  Sum_probs=98.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ..++++||||++|.||..++++|+++|++|++++|+.+........+.  .+.++.++.+|+++.+.+++++.      .
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~------~   79 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK--EGDRLRLFRADLQEEGSFDEAVK------G   79 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc--cCCeEEEEECCCCCHHHHHHHHc------C
Confidence            357889999999999999999999999999999988765555444432  23468889999999988877665      4


Q ss_pred             ccEEEEcCCCCCCCCCCC-CCCCCHHHH--HHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTN-FTEISFDSF--QKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|.+||+|+.   ..... ....+.+++  ..++++|+.+++.+++.+.+..   +.++||++||....
T Consensus        80 ~d~Vih~A~~---~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vy  142 (353)
T PLN02896         80 CDGVFHVAAS---MEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTL  142 (353)
T ss_pred             CCEEEECCcc---ccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhc
Confidence            7999999997   32221 122233333  4567788899999999887542   23599999997544

>PLN02214 cinnamoyl-CoA reductase

Probab=99.64  E-value=5.6e-15  Score=114.73  Aligned_cols=124  Identities=15%  Similarity=0.190  Sum_probs=95.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH-HHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR-FADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .++++++||||+|.||.+++++|+++|++|++++|+.+.... ..+.+.. ...++.++.+|+++++++++++.      
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh------
Confidence            357899999999999999999999999999999997654322 1222221 22368889999999998887776      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      .+|++||+|+.   ..         +++...+++|+.++..+++++.+.    +..+||++||..+..
T Consensus        81 ~~d~Vih~A~~---~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avy  132 (342)
T PLN02214         81 GCDGVFHTASP---VT---------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVY  132 (342)
T ss_pred             cCCEEEEecCC---CC---------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeee
Confidence            47999999986   31         235678999999999999987643    335999999976544

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.62  E-value=1.4e-14  Score=111.47  Aligned_cols=128  Identities=18%  Similarity=0.177  Sum_probs=95.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+|+++||||+|.||.+++++|+++|++|+++.|+....++..+..... ...++.++.+|+++++.++++++      .
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   77 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------G   77 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------C
Confidence            4789999999999999999999999999998888776544433322210 12468889999999998887776      4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|++||+|+.   .... .    .+.+...+++|+.++..+++.+...   .+..+||++||..+.
T Consensus        78 ~d~vih~A~~---~~~~-~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~  132 (322)
T PLN02986         78 CDAVFHTASP---VFFT-V----KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAV  132 (322)
T ss_pred             CCEEEEeCCC---cCCC-C----CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhhe
Confidence            7999999986   3221 1    1223567899999999999886532   123599999998653

>PLN02650 dihydroflavonol-4-reductase

Probab=99.62  E-value=1.6e-14  Score=112.40  Aligned_cols=127  Identities=14%  Similarity=0.153  Sum_probs=95.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ..|++|||||+|.||.+++++|+++|++|++++|+.+...+....+... ...++.++.+|+++.+.++++++      .
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------~   77 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------G   77 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh------C
Confidence            5688999999999999999999999999999998876555443322210 12358889999999988877665      4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|.+||+|+.   ....   .  .+.++..+++|+.+++.+++.+.+...   ..+||++||...
T Consensus        78 ~d~ViH~A~~---~~~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~---~~r~v~~SS~~~  131 (351)
T PLN02650         78 CTGVFHVATP---MDFE---S--KDPENEVIKPTVNGMLSIMKACAKAKT---VRRIVFTSSAGT  131 (351)
T ss_pred             CCEEEEeCCC---CCCC---C--CCchhhhhhHHHHHHHHHHHHHHhcCC---ceEEEEecchhh
Confidence            7999999986   3211   1  122357789999999999999876431   248999999754

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.60  E-value=3.7e-15  Score=111.94  Aligned_cols=129  Identities=17%  Similarity=0.264  Sum_probs=94.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcC-CcE----EEEEeecCCHHHHHHHHHHHHhcC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEK-SQV----FAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~----~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +|||||+|.||.++|+++++.+. +++++++++..+-++.+++....+ .++    ..+.+|+.|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999875 799999999999999888864322 233    34578999999999888864    


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      ++|+++|.|+.    ...|+.+.   ...+.+++|+.|+.++++++..+-.    .++|+||+-.+..|.
T Consensus        77 ~pdiVfHaAA~----KhVpl~E~---~p~eav~tNv~GT~nv~~aa~~~~v----~~~v~ISTDKAv~Pt  135 (293)
T PF02719_consen   77 KPDIVFHAAAL----KHVPLMED---NPFEAVKTNVLGTQNVAEAAIEHGV----ERFVFISTDKAVNPT  135 (293)
T ss_dssp             T-SEEEE----------HHHHCC---CHHHHHHHHCHHHHHHHHHHHHTT-----SEEEEEEECGCSS--
T ss_pred             CCCEEEEChhc----CCCChHHh---CHHHHHHHHHHHHHHHHHHHHHcCC----CEEEEccccccCCCC
Confidence            79999999997    34455443   4566799999999999999886543    399999999887764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.59  E-value=7.3e-14  Score=107.97  Aligned_cols=125  Identities=12%  Similarity=0.072  Sum_probs=91.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|.||+.++++|+++|++|++++|...........+....+.++.++.+|++|++.++.++..    .++|++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~d~v   77 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD----HAIDTV   77 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc----CCCCEE
Confidence            4899999999999999999999999998876533322222223221344677889999999988887764    369999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ||+|+.   .....    ..+.....+++|+.++..+++.+.    +.+..++|++||..
T Consensus        78 vh~a~~---~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~  126 (338)
T PRK10675         78 IHFAGL---KAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AANVKNLIFSSSAT  126 (338)
T ss_pred             EECCcc---ccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHH
Confidence            999987   32211    123345678999999999887654    43445899999964

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.56  E-value=8.9e-14  Score=106.76  Aligned_cols=127  Identities=14%  Similarity=0.160  Sum_probs=93.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+|+++||||+|.||+.++++|+++|++|++++|+.............. ...++.++.+|+++++.++++++      .
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   76 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD------G   76 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc------C
Confidence            4688999999999999999999999999999988765433222211110 12468899999999988877665      4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|.+||+|+.   .... ..    +.....+++|+.++..+++++....   +..+||++||..+
T Consensus        77 ~d~Vih~A~~---~~~~-~~----~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~  130 (322)
T PLN02662         77 CEGVFHTASP---FYHD-VT----DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAA  130 (322)
T ss_pred             CCEEEEeCCc---ccCC-CC----ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHH
Confidence            7999999986   3211 11    1124678999999999999976432   2349999999764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.53  E-value=2e-13  Score=104.13  Aligned_cols=123  Identities=15%  Similarity=0.111  Sum_probs=90.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChh--hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLG--RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +++||||+|.||.+++++|+++|  ++|++++|...  ..+.+ +.+.  ...++.++.+|++++++++++++..    +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~----~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL-ADLE--DNPRYRFVKGDIGDRELVSRLFTEH----Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh-hhhc--cCCCcEEEEcCCcCHHHHHHHHhhc----C
Confidence            38999999999999999999987  68888876321  11111 1221  2236788899999999998888753    5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +|++||+|+.   ...    +.+.+..+..+++|+.++..+++.+...+.+   .++|++||..
T Consensus        74 ~d~vi~~a~~---~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~i~~Ss~~  127 (317)
T TIGR01181        74 PDAVVHFAAE---SHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWHE---FRFHHISTDE  127 (317)
T ss_pred             CCEEEEcccc---cCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC---ceEEEeeccc
Confidence            8999999987   321    2234566778999999999999887654322   4899999854

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.50  E-value=7.2e-13  Score=104.65  Aligned_cols=127  Identities=17%  Similarity=0.158  Sum_probs=91.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH--HHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR--FADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++++||||+|.||+.++++|+++|++|++++|+......  ..+.+.. ....+.++.+|++|+++++++++..  .+
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~--~~  135 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLFSE--GD  135 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHHHh--CC
Confidence            57789999999999999999999999999999998754321  1111111 2246888999999999999888754  12


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      ++|++|||++.   .... .        ...+++|+.++..+++++.    +.+.+++|++||.+...
T Consensus       136 ~~D~Vi~~aa~---~~~~-~--------~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~  187 (390)
T PLN02657        136 PVDVVVSCLAS---RTGG-V--------KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK  187 (390)
T ss_pred             CCcEEEECCcc---CCCC-C--------ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC
Confidence            79999999986   2211 0        1235678887777777653    44456999999986543

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.50  E-value=5.2e-13  Score=103.92  Aligned_cols=128  Identities=14%  Similarity=0.046  Sum_probs=91.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHH----hhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA----REEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+++++++||||+|-||..++++|+++|++|++++|.........+...    .....++.++.+|++|.+.+..+++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            4567899999999999999999999999999999885433222111111    1012357889999999887776665  


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                          .+|++||.|+.   ... +   ...++....+++|+.++..+++.+..    .+-.++|++||..
T Consensus        90 ----~~d~ViHlAa~---~~~-~---~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~  143 (348)
T PRK15181         90 ----NVDYVLHQAAL---GSV-P---RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSS  143 (348)
T ss_pred             ----CCCEEEECccc---cCc-h---hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechH
Confidence                47999999987   211 1   11233445799999999999988743    3334899999864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.50  E-value=3.3e-13  Score=103.58  Aligned_cols=116  Identities=20%  Similarity=0.208  Sum_probs=90.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++|||++|.||..++++|+++|++|++++|+++.....       ....+.++.+|++++++++++++      .+|++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~D~~~~~~l~~~~~------~~d~v   68 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-------EGLDVEIVEGDLRDPASLRKAVA------GCRAL   68 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc-------ccCCceEEEeeCCCHHHHHHHHh------CCCEE
Confidence            589999999999999999999999999999976543221       12357889999999988877665      57999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ||+++.   ...      ..++++..+++|+.++..+++.+..    .+.+++|++||....
T Consensus        69 i~~a~~---~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~  117 (328)
T TIGR03466        69 FHVAAD---YRL------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATL  117 (328)
T ss_pred             EEecee---ccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhc
Confidence            999976   221      1234567899999999999888653    234599999997654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.49  E-value=6.5e-13  Score=103.29  Aligned_cols=126  Identities=11%  Similarity=0.107  Sum_probs=90.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCe-EEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYT-VAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++||||+|.||..++++|+++|++ |+.+++..  ....... .+.  .+.++.++.+|++|.+++++++++    .++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS--DSERYVFEHADICDRAELDRIFAQ----HQP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc--cCCceEEEEecCCCHHHHHHHHHh----cCC
Confidence            4899999999999999999999986 44445432  1122211 111  234578889999999999888875    369


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-----CCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-----GKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~  153 (167)
                      |++||+|+.   ....    .+.+..+..+++|+.++..+++.+.+.|...     +..++|++||..
T Consensus        75 d~vih~A~~---~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~  135 (352)
T PRK10084         75 DAVMHLAAE---SHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE  135 (352)
T ss_pred             CEEEECCcc---cCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh
Confidence            999999987   3221    1123446789999999999999998765321     224899999864

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.48  E-value=8.7e-13  Score=101.04  Aligned_cols=124  Identities=15%  Similarity=0.127  Sum_probs=90.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++||||+|.||..++++|+++|++|++++|......+....+.. . .++..+.+|+++++++++++..    +++|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER-I-TRVTFVEGDLRDRELLDRLFEE----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc-c-cceEEEECCCCCHHHHHHHHHh----CCCcEE
Confidence            379999999999999999999999998887643322222222211 1 1577889999999999887764    479999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ||+||.   ....+    +.++....++.|+.++..+++.+.    +.+..++|++||...
T Consensus        75 v~~ag~---~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~ss~~~  124 (328)
T TIGR01179        75 IHFAGL---IAVGE----SVQDPLKYYRNNVVNTLNLLEAMQ----QTGVKKFIFSSSAAV  124 (328)
T ss_pred             EECccc---cCcch----hhcCchhhhhhhHHHHHHHHHHHH----hcCCCEEEEecchhh
Confidence            999997   32222    223455678899999999988754    333458999988543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.48  E-value=2.1e-12  Score=96.13  Aligned_cols=117  Identities=12%  Similarity=0.204  Sum_probs=84.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (167)
                      .+++++||||+|+||+.++++|+++|++|+++.|+.++......     .+.++.++.+|+++. +.+.   +.+  ..+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~l~---~~~--~~~   85 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-----QDPSLQIVRADVTEGSDKLV---EAI--GDD   85 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-----cCCceEEEEeeCCCCHHHHH---HHh--hcC
Confidence            56899999999999999999999999999999998765433221     123688899999984 3322   222  036


Q ss_pred             ccEEEEcCCCCCCCCC-CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +|.+|+++|.   ... .+.         ..+++|..++..+++++.    +.+.++||++||..
T Consensus        86 ~d~vi~~~g~---~~~~~~~---------~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~  134 (251)
T PLN00141         86 SDAVICATGF---RRSFDPF---------APWKVDNFGTVNLVEACR----KAGVTRFILVSSIL  134 (251)
T ss_pred             CCEEEECCCC---CcCCCCC---------CceeeehHHHHHHHHHHH----HcCCCEEEEEcccc
Confidence            8999999986   221 111         124688888888888763    44557999999975

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.46  E-value=6.5e-13  Score=100.53  Aligned_cols=120  Identities=20%  Similarity=0.213  Sum_probs=90.9

Q ss_pred             EEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           16 AIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        16 lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      |||||+|-+|..++++|+++|  ++|.++++.+....  .+.+.  ......++.+|++|+++++++++      ..|++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~--~~~~~~~~~~Di~d~~~l~~a~~------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQ--KSGVKEYIQGDITDPESLEEALE------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhh--cccceeEEEeccccHHHHHHHhc------CCceE
Confidence            699999999999999999999  68888887654322  11111  11223389999999999998887      46999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      +|+|+.   .+...     ....+.++++|+.|+-++++++...    +--++|++||.....+
T Consensus        71 ~H~Aa~---~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~VkrlVytSS~~vv~~  122 (280)
T PF01073_consen   71 FHTAAP---VPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----GVKRLVYTSSISVVFD  122 (280)
T ss_pred             EEeCcc---ccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcCcceeEe
Confidence            999987   32222     2446778999999999999988754    3349999999887654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.45  E-value=1.6e-12  Score=97.06  Aligned_cols=125  Identities=18%  Similarity=0.136  Sum_probs=94.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      ++|||||.|.||...|..|++.|++|++++.-...-.+.+...      ...++..|+.|.+.+++++++.    +||.+
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~----~idaV   71 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEEN----KIDAV   71 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhc----CCCEE
Confidence            5899999999999999999999999999987544333322211      1678999999999999999874    89999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      ||-||.   ...+    -+.++..++++.|+.+++.|++++...    +--+||| ||.++..|.|.
T Consensus        72 iHFAa~---~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vF-SStAavYG~p~  126 (329)
T COG1087          72 VHFAAS---ISVG----ESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIF-SSTAAVYGEPT  126 (329)
T ss_pred             EECccc---cccc----hhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEE-ecchhhcCCCC
Confidence            999997   2222    345677889999999999999886544    3335555 55566665544

>PLN02427 UDP-apiose/xylose synthase

Probab=99.45  E-value=1.7e-12  Score=102.27  Aligned_cols=127  Identities=11%  Similarity=0.124  Sum_probs=89.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +.+.++++||||+|.||..++++|+++ |++|++++|+.+....+.+........++.++.+|++|.+.+++++.     
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-----
Confidence            345678999999999999999999998 58999999876544332211000012368899999999988877665     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       .+|++||+|+.   .......    ++-...+..|+.+...+++++...    + .++|++||..
T Consensus        86 -~~d~ViHlAa~---~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~  138 (386)
T PLN02427         86 -MADLTINLAAI---CTPADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCE  138 (386)
T ss_pred             -cCCEEEEcccc---cChhhhh----hChHHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeee
Confidence             37999999987   3221111    112234567999999888876422    2 4899999864

>PLN02686 cinnamoyl-CoA reductase

Probab=99.41  E-value=1e-11  Score=97.41  Aligned_cols=128  Identities=13%  Similarity=0.214  Sum_probs=91.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-----cCCcEEEEEeecCCHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-----EKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      ..++|+++||||+|.||.+++++|+++|++|+++.|+.+..+++. .+...     ....+.++.+|++|.++++++++.
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            356899999999999999999999999999998888766554442 22110     012578889999999999887773


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           84 VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                            +|.++|.++.   ........    ......++|+.++..+++++...-   +-.++|++||..
T Consensus       129 ------~d~V~hlA~~---~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~~---~v~r~V~~SS~~  182 (367)
T PLN02686        129 ------CAGVFHTSAF---VDPAGLSG----YTKSMAELEAKASENVIEACVRTE---SVRKCVFTSSLL  182 (367)
T ss_pred             ------ccEEEecCee---eccccccc----ccchhhhhhHHHHHHHHHHHHhcC---CccEEEEeccHH
Confidence                  5888998886   32221111    112446778999888888865321   223899999964

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.37  E-value=1e-11  Score=93.60  Aligned_cols=127  Identities=13%  Similarity=0.134  Sum_probs=95.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ++++|||||+|.||.+.+.+|.++|+.|++++.=.....+..+.++..  .+..+.++..|+.|.+.+++++++.    +
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----~   77 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----K   77 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc----C
Confidence            578999999999999999999999999999865322222222222222  2478999999999999999999975    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +|.++|-|+.   ...+    .+.+.....++.|+.+.+.++..+..+    +.-.+|+.||..
T Consensus        78 fd~V~Hfa~~---~~vg----eS~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~sssat  130 (343)
T KOG1371|consen   78 FDAVMHFAAL---AAVG----ESMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVFSSSAT  130 (343)
T ss_pred             CceEEeehhh---hccc----hhhhCchhheehhhhhHHHHHHHHHHc----CCceEEEeccee
Confidence            9999999987   3322    223444788999999999998886544    334788877744

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.36  E-value=2.1e-11  Score=89.40  Aligned_cols=118  Identities=19%  Similarity=0.201  Sum_probs=91.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++||||+|-||.+++++|.++|+.|+.+.|+..........      .++.++.+|+++.+.++++++..    .+|.+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKA----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHH----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------ceEEEEEeecccccccccccccc----CceEEE
Confidence            68999999999999999999999988887765543222211      17899999999999999999875    799999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ++|+.   ..    ...+.+.....++.|+.++..+++.+...    +..++|++||..
T Consensus        71 ~~a~~---~~----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~  118 (236)
T PF01370_consen   71 HLAAF---SS----NPESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSAS  118 (236)
T ss_dssp             EEBSS---SS----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGG
T ss_pred             Eeecc---cc----ccccccccccccccccccccccccccccc----cccccccccccc
Confidence            99987   21    11223566778888998888888877533    335999999953

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.34  E-value=2.1e-11  Score=94.84  Aligned_cols=117  Identities=11%  Similarity=0.177  Sum_probs=84.5

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC-CHHHHHHHHHHHHhcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS-DSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~i   90 (167)
                      ++++||||+|.||..++++|++. |++|++++|+........      ....+.++.+|++ +.+.+.++++      ++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV------NHPRMHFFEGDITINKEWIEYHVK------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc------cCCCeEEEeCCCCCCHHHHHHHHc------CC
Confidence            45999999999999999999986 699999988654322211      2235888999998 5665554443      58


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      |++||+|+.   ..+..    ..++....+++|+.++.++++++..    .+ .++|++||..
T Consensus        70 d~ViH~aa~---~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~  120 (347)
T PRK11908         70 DVILPLVAI---ATPAT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSE  120 (347)
T ss_pred             CEEEECccc---CChHH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecce
Confidence            999999986   22211    1223456689999999988887653    23 4999999964

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.33  E-value=5.1e-11  Score=88.91  Aligned_cols=138  Identities=14%  Similarity=0.064  Sum_probs=101.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecC--hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARD--LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.+|||||.|.||..+++.++++.-  +|+.++.=  ....+.+....   ...+..+++.|++|.+.+.+++.+-    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~~----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKEY----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHhc----
Confidence            3589999999999999999999754  46666541  12233332222   3458999999999999999998864    


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC--ccc-----------
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS--ASL-----------  155 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~--~~~-----------  155 (167)
                      ++|++||-|+=.|       .+.+.++.+..+++|+.|++.+++++.....+   -+++.||.-  .|.           
T Consensus        74 ~~D~VvhfAAESH-------VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~  143 (340)
T COG1088          74 QPDAVVHFAAESH-------VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTET  143 (340)
T ss_pred             CCCeEEEechhcc-------ccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccC
Confidence            7999999998622       35566777888999999999999998877643   389999872  221           


Q ss_pred             cCCCCccccccC
Q 031016          156 NGIAGFSELCKN  167 (167)
Q Consensus       156 ~~~~~~~~y~as  167 (167)
                      .|..+.++|+||
T Consensus       144 tp~~PsSPYSAS  155 (340)
T COG1088         144 TPYNPSSPYSAS  155 (340)
T ss_pred             CCCCCCCCcchh
Confidence            233456778876

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.33  E-value=6.8e-11  Score=83.74  Aligned_cols=107  Identities=19%  Similarity=0.266  Sum_probs=85.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++|+||+|.+|+.+++.|+++|++|+++.|++++.++         ..++..+.+|+.|++++.+++.      +.|.+|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALK------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHT------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhh------hcchhh
Confidence            6899999999999999999999999999999887665         3578999999999988887766      579999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      +++|.   ...        +             ...++.++..+++.+..++|++|+.......+.
T Consensus        66 ~~~~~---~~~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~  107 (183)
T PF13460_consen   66 HAAGP---PPK--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPG  107 (183)
T ss_dssp             ECCHS---TTT--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTS
T ss_pred             hhhhh---hcc--------c-------------ccccccccccccccccccceeeeccccCCCCCc
Confidence            99986   222        1             445566666677766679999998776554333

...

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.30  E-value=4.3e-11  Score=92.05  Aligned_cols=111  Identities=20%  Similarity=0.210  Sum_probs=82.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|.+|+.++++|+++|++|.+++|+.++...+    .   ...+.++.+|++|++++.++++      .+|.+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~---~~~v~~v~~Dl~d~~~l~~al~------g~d~V   68 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----K---EWGAELVYGDLSLPETLPPSFK------GVTAI   68 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----h---hcCCEEEECCCCCHHHHHHHHC------CCCEE
Confidence            589999999999999999999999999999986543221    1   1257889999999998876665      47999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ||+++.   ...         +.....++|+.++..+.+++.    +.+-.++|++||..
T Consensus        69 i~~~~~---~~~---------~~~~~~~~~~~~~~~l~~aa~----~~gvkr~I~~Ss~~  112 (317)
T CHL00194         69 IDASTS---RPS---------DLYNAKQIDWDGKLALIEAAK----AAKIKRFIFFSILN  112 (317)
T ss_pred             EECCCC---CCC---------CccchhhhhHHHHHHHHHHHH----HcCCCEEEEecccc
Confidence            998765   211         112345678888877777654    33334999999854

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.30  E-value=4.2e-11  Score=100.47  Aligned_cols=119  Identities=16%  Similarity=0.184  Sum_probs=86.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHH-HHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS-VREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   88 (167)
                      .+++++||||+|.||..++++|+++ |++|++++|+.......   +   ...++.++.+|++|.+. ++++++      
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~---~~~~~~~~~gDl~d~~~~l~~~l~------  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L---GHPRFHFVEGDISIHSEWIEYHIK------  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c---CCCceEEEeccccCcHHHHHHHhc------
Confidence            4678999999999999999999986 79999999876432221   1   12358888999998654 343333      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      .+|++||.|+.   ......    .+..+..+++|+.++..+++++...    + -++|++||..
T Consensus       382 ~~D~ViHlAa~---~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~  434 (660)
T PRK08125        382 KCDVVLPLVAI---ATPIEY----TRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSE  434 (660)
T ss_pred             CCCEEEECccc---cCchhh----ccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchh
Confidence            58999999987   222111    1223457899999999999887643    2 3899999964

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.29  E-value=8.6e-11  Score=91.22  Aligned_cols=123  Identities=15%  Similarity=0.147  Sum_probs=86.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhH---HHHHHHHHhhc------C-CcEEEEEeecCCHH------
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRL---SRFADEIAREE------K-SQVFAIRIDCSDSR------   75 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~---~~~~~~l~~~~------~-~~~~~~~~D~~~~~------   75 (167)
                      +++||||+|+||..++++|+++|  ++|+++.|+.+..   +++.+.++...      . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  6799999876532   23333332210      1 47899999998753      


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           76 SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        76 ~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ..+.+.      ..+|.+||+|+.   ...       ...++...++|+.++..+++.+...    +..+++++||....
T Consensus        81 ~~~~~~------~~~d~vih~a~~---~~~-------~~~~~~~~~~nv~g~~~ll~~a~~~----~~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLA------ENVDTIVHNGAL---VNW-------VYPYSELRAANVLGTREVLRLAASG----RAKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHH------hhCCEEEeCCcE---ecc-------CCcHHHHhhhhhHHHHHHHHHHhhC----CCceEEEEcccccc
Confidence            222222      468999999987   221       1235667889999999988876542    22369999998654


Q ss_pred             c
Q 031016          156 N  156 (167)
Q Consensus       156 ~  156 (167)
                      .
T Consensus       141 ~  141 (367)
T TIGR01746       141 A  141 (367)
T ss_pred             C
Confidence            3

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.29  E-value=5.9e-11  Score=93.23  Aligned_cols=122  Identities=12%  Similarity=0.077  Sum_probs=86.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..++++++|||++|.||.++++.|.++|++|++++|.....      +.. ......++.+|+++.+.+..++.      
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   84 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSE-DMFCHEFHLVDLRVMENCLKVTK------   84 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------ccc-ccccceEEECCCCCHHHHHHHHh------
Confidence            34678999999999999999999999999999999854321      100 11124677889999887766554      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      .+|.+||+|+.   ........   ++.+..+..|+.++..+++++..    .+..++|++||..
T Consensus        85 ~~D~Vih~Aa~---~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~  139 (370)
T PLN02695         85 GVDHVFNLAAD---MGGMGFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSAC  139 (370)
T ss_pred             CCCEEEEcccc---cCCccccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchh
Confidence            47999999986   32211111   12234567899999988887643    2334999999864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.28  E-value=8.7e-11  Score=98.70  Aligned_cols=126  Identities=11%  Similarity=0.078  Sum_probs=89.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +.+++|||||+|.||..++++|+++  +++|+++++..  +....+...  . ...++.++.+|++|.+.+++++..   
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~-~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--K-SSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--c-cCCCeEEEECCCCChHHHHHHHhh---
Confidence            4688999999999999999999998  67898888742  222222111  0 234688999999999887765542   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       ..+|++||+|+.   ....    ...++....+++|+.++..+++++...   ....++|++||..
T Consensus        79 -~~~D~ViHlAa~---~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~  134 (668)
T PLN02260         79 -EGIDTIMHFAAQ---THVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDE  134 (668)
T ss_pred             -cCCCEEEECCCc---cCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchH
Confidence             479999999997   3221    112233567899999999998886432   1135999999964

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.27  E-value=1.8e-11  Score=89.91  Aligned_cols=101  Identities=16%  Similarity=0.209  Sum_probs=77.6

Q ss_pred             cEEEEEcC-CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           13 GIAAIVGV-GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        13 ~~~lItGa-~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      .+=.||.. +||||+++|++|+++|++|+++++...        +.. ..    ...+|+++.++++++++.+. .++++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-~~----~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-EP----HPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-cc----CCcceeecHHHHHHHHHHHHHHcCCC
Confidence            34455555 579999999999999999999876311        111 11    13589999999999999988 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHH
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ  132 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  132 (167)
                      |++|||||+   ....++.+.+.++|++++.   .+.|++.+
T Consensus        82 DiLVnnAgv---~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAV---SDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             CEEEECCEe---ccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            999999998   5667888999999997754   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.26  E-value=1.1e-10  Score=82.67  Aligned_cols=83  Identities=16%  Similarity=0.266  Sum_probs=71.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~   92 (167)
                      +++||||+ |+|.+++++|+++|++|++.+|+++..+++...+..  ..++.++.+|++|+++++++++.+. +.+++|.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            58999998 788889999999999999999988777666655532  4578889999999999999999998 8899999


Q ss_pred             EEEcCCC
Q 031016           93 LVYNAYQ   99 (167)
Q Consensus        93 lv~~ag~   99 (167)
                      +|+..-.
T Consensus        79 lv~~vh~   85 (177)
T PRK08309         79 AVAWIHS   85 (177)
T ss_pred             EEEeccc
Confidence            9988855

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.25  E-value=1e-10  Score=88.44  Aligned_cols=101  Identities=18%  Similarity=0.273  Sum_probs=80.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++||||+|.||.+++++|.++|++|++++|+                      .+|+.+++.++++++..    ++|.+|
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~----~~d~vi   55 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAI----RPDAVV   55 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhC----CCCEEE
Confidence            7999999999999999999999999998884                      36999999998887753    689999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      |+++.   ....    ...+..+..+++|+.++..+++.+..    .+ .++|++||..
T Consensus        56 ~~a~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~  102 (287)
T TIGR01214        56 NTAAY---TDVD----GAESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDY  102 (287)
T ss_pred             ECCcc---cccc----ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeee
Confidence            99987   3211    11234566789999999999888643    22 3899999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.22  E-value=1.7e-10  Score=88.12  Aligned_cols=105  Identities=14%  Similarity=0.079  Sum_probs=80.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      ++|||||+|-||.+++++|.++| +|+.++|...                  .+..|++|.+.++++++..    ++|++
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~----~~D~V   58 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKI----RPDVI   58 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhc----CCCEE
Confidence            49999999999999999999999 7888877421                  2346999999998888753    68999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ||+|+.   ....    ...++.+..+.+|+.++..+++++...    + .++|++||..
T Consensus        59 ih~Aa~---~~~~----~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~  106 (299)
T PRK09987         59 VNAAAH---TAVD----KAESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDY  106 (299)
T ss_pred             EECCcc---CCcc----hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccce
Confidence            999987   3221    112234566789999999999887542    2 3899999854

>PRK05865 hypothetical protein; Provisional

Probab=99.21  E-value=3.6e-10  Score=96.28  Aligned_cols=103  Identities=24%  Similarity=0.265  Sum_probs=81.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|.||.+++++|+++|++|++++|+....          ...++.++.+|++|.+++.++++      .+|++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----------~~~~v~~v~gDL~D~~~l~~al~------~vD~V   65 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----------WPSSADFIAADIRDATAVESAMT------GADVV   65 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----------cccCceEEEeeCCCHHHHHHHHh------CCCEE
Confidence            489999999999999999999999999999874321          11257788999999998887766      47999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      ||+|+.   ...             .+++|+.++..+++++    .+.+.++||++||.
T Consensus        66 VHlAa~---~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~  104 (854)
T PRK05865         66 AHCAWV---RGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSG  104 (854)
T ss_pred             EECCCc---ccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCc
Confidence            999986   211             3578999988776664    44445699999986

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.19  E-value=2.8e-10  Score=86.77  Aligned_cols=117  Identities=18%  Similarity=0.167  Sum_probs=85.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      +||||++|.||..++++|.++|++|+.++|.........        ..+.++.+|+++.+..+...+..    + |.+|
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~----~-d~vi   69 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGV----P-DAVI   69 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcC----C-CEEE
Confidence            899999999999999999999999999998765432211        35678889999986665555532    2 9999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      |+|+.   .... ....+  +....+.+|+.++..+++++..    .+..++|+.||...
T Consensus        70 h~aa~---~~~~-~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~  119 (314)
T COG0451          70 HLAAQ---SSVP-DSNAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSV  119 (314)
T ss_pred             Ecccc---Cchh-hhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCce
Confidence            99987   2211 11111  4556899999999999999865    23348888666443

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.18  E-value=8.3e-11  Score=100.57  Aligned_cols=150  Identities=15%  Similarity=0.057  Sum_probs=122.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhH---HHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRL---SRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ..|.++|+|+-||+|++++++|.++|++ +++++|+.-+-   ..+.+..+. .+.++.+-..|++..+..++++++..+
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~-~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR-RGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh-cCeEEEEecccchhhhhHHHHHHHhhh
Confidence            5799999999999999999999999995 77788875432   233444544 677888888899999999999998878


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++.+++|.|.+   ..++-+++.+.+.+.++-+..+.++.++=+.-...-.+  -..+|.+||...-+|+.|+..|+-
T Consensus      1846 l~~vGGiFnLA~V---LRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~ 1920 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAV---LRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGL 1920 (2376)
T ss_pred             cccccchhhHHHH---HHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccch
Confidence            8999999999998   78889999999999999999999988865443322222  138999999999999999998874

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.17  E-value=6.4e-10  Score=85.03  Aligned_cols=115  Identities=14%  Similarity=0.180  Sum_probs=77.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH---hcCCcc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL---SLGFVE   91 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~~i~   91 (167)
                      ++||||+|.||++++++|+++|++++++.|+........           ....+|++|..+.+.+++.+.   ..+++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-----------NLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-----------hhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            799999999999999999999997766655433211110           112346666555555555443   135799


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++||+|+.   ....   ..+.   +..++.|+.++..+++.+..    .+ .++|++||...
T Consensus        71 ~Vih~A~~---~~~~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~v  119 (308)
T PRK11150         71 AIFHEGAC---SSTT---EWDG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAAT  119 (308)
T ss_pred             EEEECcee---cCCc---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHH
Confidence            99999986   2221   1122   34689999999999888753    23 37999999753

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.17  E-value=5.7e-10  Score=85.28  Aligned_cols=115  Identities=10%  Similarity=0.100  Sum_probs=80.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      ++||||+|.||..++++|.++|+ .|++++|..... ... .+    .  ...+..|+++++.++.+.+.  .+.++|++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~----~--~~~~~~d~~~~~~~~~~~~~--~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL----A--DLVIADYIDKEDFLDRLEKG--AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh----h--heeeeccCcchhHHHHHHhh--ccCCCCEE
Confidence            58999999999999999999998 688777654321 111 11    1  12456688877666654442  13579999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ||+|+.   ...      +.++.+..+++|+.++..+++.+..    .+ .++|++||..
T Consensus        71 vh~A~~---~~~------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~  116 (314)
T TIGR02197        71 FHQGAC---SDT------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAA  116 (314)
T ss_pred             EECccc---cCc------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHH
Confidence            999987   221      2235577889999999999988753    22 4899999965

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.13  E-value=3.4e-09  Score=80.19  Aligned_cols=144  Identities=19%  Similarity=0.234  Sum_probs=109.6

Q ss_pred             CcEEEEEcC-CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc--
Q 031016           12 RGIAAIVGV-GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL--   87 (167)
Q Consensus        12 ~~~~lItGa-~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~--   87 (167)
                      ..+|+|.|. +..+++.++.-|-++|+-|++.+.+.+..+....+    ...++.....|..++.++...+.+.. ..  
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e----~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE----DRPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc----cCCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            467888886 69999999999999999999998887765544433    23457788888877777776666664 22  


Q ss_pred             C------------CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEec-CC
Q 031016           88 G------------FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTG-CS  152 (167)
Q Consensus        88 ~------------~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~is-s~  152 (167)
                      +            .+..+|.....  .++.+|++.++.++|.+.+++|+..++...|.++|++..+  ++.+||++. |.
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl--~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi  156 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSL--SYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSI  156 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCC--CCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCch
Confidence            2            46677777765  3678899999999999999999999999999999999982  245776665 44


Q ss_pred             ccccCCCCc
Q 031016          153 ASLNGIAGF  161 (167)
Q Consensus       153 ~~~~~~~~~  161 (167)
                      .+....|..
T Consensus       157 ~ssl~~Pfh  165 (299)
T PF08643_consen  157 SSSLNPPFH  165 (299)
T ss_pred             hhccCCCcc
Confidence            455554443

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.12  E-value=3.1e-10  Score=86.20  Aligned_cols=106  Identities=20%  Similarity=0.237  Sum_probs=78.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      ++||||++|-+|.++.+.|.++|++|+.++|+                      .+|++|.+.+.+++++.    ++|++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~----~pd~V   55 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAF----KPDVV   55 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHh----CCCeE
Confidence            48999999999999999999999999888775                      56999999999999876    69999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ||+|+.   ...    +.-.++-+..+.+|+.++..+++.+...     +.++|++||..-..|
T Consensus        56 in~aa~---~~~----~~ce~~p~~a~~iN~~~~~~la~~~~~~-----~~~li~~STd~VFdG  107 (286)
T PF04321_consen   56 INCAAY---TNV----DACEKNPEEAYAINVDATKNLAEACKER-----GARLIHISTDYVFDG  107 (286)
T ss_dssp             EE---------H----HHHHHSHHHHHHHHTHHHHHHHHHHHHC-----T-EEEEEEEGGGS-S
T ss_pred             ecccee---ecH----HhhhhChhhhHHHhhHHHHHHHHHHHHc-----CCcEEEeeccEEEcC
Confidence            999987   211    1223456778999999999999987632     359999999764433

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.12  E-value=1e-09  Score=88.06  Aligned_cols=118  Identities=14%  Similarity=0.110  Sum_probs=82.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH-HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS-RFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +++.++||||+|.||..++++|+++|++|+++++...... .....+   ...++.++..|+.++.     +      ..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~---~~~~~~~i~~D~~~~~-----l------~~  183 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF---SNPNFELIRHDVVEPI-----L------LE  183 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc---cCCceEEEECCccChh-----h------cC
Confidence            5688999999999999999999999999999887532211 111111   2335777888886652     1      24


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|.+||+|+.   ......    .++....+++|+.++..+++++...    + .++|++||...
T Consensus       184 ~D~ViHlAa~---~~~~~~----~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~V  236 (442)
T PLN02206        184 VDQIYHLACP---ASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEV  236 (442)
T ss_pred             CCEEEEeeee---cchhhh----hcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHH
Confidence            7999999986   221111    1234567899999999999887532    3 38999999753

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.11  E-value=3.9e-10  Score=85.86  Aligned_cols=103  Identities=17%  Similarity=0.151  Sum_probs=76.3

Q ss_pred             EEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEEE
Q 031016           16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVY   95 (167)
Q Consensus        16 lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv~   95 (167)
                      |||||+|.||..+++.|.++|+.|++..+.                     ..+|+++.++++++++..    ++|++||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~----~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE----KPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc----CCCEEEE
Confidence            699999999999999999999987765431                     137999999888877753    5799999


Q ss_pred             cCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           96 NAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +|+.   .......   .++....+++|+.++..+++.+...    +..++|++||..
T Consensus        56 ~A~~---~~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~~  103 (306)
T PLN02725         56 AAAK---VGGIHAN---MTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSSC  103 (306)
T ss_pred             eeee---ecccchh---hhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCcee
Confidence            9986   2111111   1223456889999999988887643    335899999864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.10  E-value=1.6e-09  Score=81.27  Aligned_cols=105  Identities=17%  Similarity=0.198  Sum_probs=85.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      +||||++|-+|.++++.|. .+++|+.++|.+                      +|++|++.+.+++.+.    ++|++|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRET----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhh----CCCEEE
Confidence            8999999999999999999 667898887743                      6999999999999986    799999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      |+|+.   ...    +.-+.+-+..+.+|..++.++++++...     +..+|+||+-.-..|.
T Consensus        56 n~AAy---t~v----D~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~  107 (281)
T COG1091          56 NAAAY---TAV----DKAESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGE  107 (281)
T ss_pred             ECccc---ccc----ccccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCC
Confidence            99997   222    2233456788999999999999997633     3689999987654443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.08  E-value=2.7e-09  Score=79.42  Aligned_cols=115  Identities=17%  Similarity=0.183  Sum_probs=71.6

Q ss_pred             EEcCCCchhHHHHHHHHHcCC--eEEEEecChhh---HHHHHHHHHhh---------cCCcEEEEEeecCCHH------H
Q 031016           17 IVGVGPNLGRSIARKFAHEGY--TVAILARDLGR---LSRFADEIARE---------EKSQVFAIRIDCSDSR------S   76 (167)
Q Consensus        17 ItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~---~~~~~~~l~~~---------~~~~~~~~~~D~~~~~------~   76 (167)
                      ||||||.+|..+.++|++++.  +|+.+.|..+.   .+++.+.+...         ...+++++.+|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  89999997643   23332222111         2678999999999854      3


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecC
Q 031016           77 VREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC  151 (167)
Q Consensus        77 ~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  151 (167)
                      .+.+.+      .+|++||+|+.   ....       ..+++..++|+.|+..+++.+...    +.-+++++||
T Consensus        81 ~~~L~~------~v~~IiH~Aa~---v~~~-------~~~~~~~~~NV~gt~~ll~la~~~----~~~~~~~iST  135 (249)
T PF07993_consen   81 YQELAE------EVDVIIHCAAS---VNFN-------APYSELRAVNVDGTRNLLRLAAQG----KRKRFHYIST  135 (249)
T ss_dssp             HHHHHH------H--EEEE--SS----SBS--------S--EEHHHHHHHHHHHHHHHTSS----S---EEEEEE
T ss_pred             hhcccc------ccceeeecchh---hhhc-------ccchhhhhhHHHHHHHHHHHHHhc----cCcceEEecc
Confidence            344333      47999999987   2111       134557889999999999887632    1229999999

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.06  E-value=3.3e-09  Score=88.92  Aligned_cols=123  Identities=16%  Similarity=0.081  Sum_probs=83.5

Q ss_pred             EEEEEcCCCchhHHHHHHHH--HcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHH--HHHHHHHHhcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFA--HEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSV--REAFEGVLSLGF   89 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~--~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~~   89 (167)
                      +++||||+|.||.+++++|+  ++|++|++++|+... ....+........++.++.+|+++++..  ...++.+   .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---cC
Confidence            59999999999999999999  579999999996432 2222222110124688999999985311  1111222   47


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|.+||+|+.   ....    .   ......++|+.++..+++.+..    .+..++|++||...
T Consensus        78 ~D~Vih~Aa~---~~~~----~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v  128 (657)
T PRK07201         78 IDHVVHLAAI---YDLT----A---DEEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAV  128 (657)
T ss_pred             CCEEEECcee---ecCC----C---CHHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEecccc
Confidence            8999999987   3211    1   2345678899999888877643    23359999998754

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.05  E-value=5.5e-09  Score=86.39  Aligned_cols=124  Identities=14%  Similarity=0.150  Sum_probs=86.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC---eEEEEecChhh---HHHHHHHH---------Hhhc--------CCcEEEE
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY---TVAILARDLGR---LSRFADEI---------AREE--------KSQVFAI   67 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~---~v~~~~r~~~~---~~~~~~~l---------~~~~--------~~~~~~~   67 (167)
                      ++|+++||||+|.+|..++++|++.+.   +|+++.|....   .+.+.+.+         +...        ..++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            689999999999999999999998653   67888885432   22221121         1111        2468999


Q ss_pred             EeecCCHH------HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc
Q 031016           68 RIDCSDSR------SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER  141 (167)
Q Consensus        68 ~~D~~~~~------~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  141 (167)
                      ..|+++++      ..+.+.+      .+|++||+|+.   ..   +    .+.++..+++|+.++.++++.+...-   
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~------~vDiVIH~AA~---v~---f----~~~~~~a~~vNV~GT~nLLelA~~~~---  258 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAK------EVDVIINSAAN---TT---F----DERYDVAIDINTRGPCHLMSFAKKCK---  258 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHh------cCCEEEECccc---cc---c----ccCHHHHHHHHHHHHHHHHHHHHHcC---
Confidence            99999872      3333222      58999999987   32   1    13567789999999999998875331   


Q ss_pred             CCceEEEecCCc
Q 031016          142 GKGTIIFTGCSA  153 (167)
Q Consensus       142 ~~g~iv~iss~~  153 (167)
                      +..++|++|+..
T Consensus       259 ~lk~fV~vSTay  270 (605)
T PLN02503        259 KLKLFLQVSTAY  270 (605)
T ss_pred             CCCeEEEccCce
Confidence            123789988854

>PLN02996 fatty acyl-CoA reductase

Probab=99.05  E-value=4.5e-09  Score=85.44  Aligned_cols=126  Identities=15%  Similarity=0.169  Sum_probs=85.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC---eEEEEecChhh---HHHHHHH---------HHhhc--------CCcEEE
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY---TVAILARDLGR---LSRFADE---------IAREE--------KSQVFA   66 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~---~v~~~~r~~~~---~~~~~~~---------l~~~~--------~~~~~~   66 (167)
                      .++|+++||||+|.+|..++++|+..+.   +|+++.|....   .+.+...         +....        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4789999999999999999999997642   67888885421   1111111         11101        157899


Q ss_pred             EEeecCCH-------HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhH
Q 031016           67 IRIDCSDS-------RSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV  139 (167)
Q Consensus        67 ~~~D~~~~-------~~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  139 (167)
                      +..|++++       +..+++++      .+|++||+|+.   ..   +.    +..+..+++|+.++..+++.+...- 
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~------~vD~ViH~AA~---v~---~~----~~~~~~~~~Nv~gt~~ll~~a~~~~-  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK------EIDIVVNLAAT---TN---FD----ERYDVALGINTLGALNVLNFAKKCV-  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh------CCCEEEECccc---cC---Cc----CCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            99999843       33444433      58999999987   32   11    2457789999999999988875421 


Q ss_pred             hcCCceEEEecCCcc
Q 031016          140 ERGKGTIIFTGCSAS  154 (167)
Q Consensus       140 ~~~~g~iv~iss~~~  154 (167)
                        +..++|++||...
T Consensus       152 --~~k~~V~vST~~v  164 (491)
T PLN02996        152 --KVKMLLHVSTAYV  164 (491)
T ss_pred             --CCCeEEEEeeeEE
Confidence              1238999988654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.04  E-value=4e-09  Score=84.55  Aligned_cols=118  Identities=15%  Similarity=0.110  Sum_probs=81.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ...+++||||+|.||..++++|+++|++|++++|......+....+.  ...++.++..|+.+..     +      ..+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~------~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L------LEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c------cCC
Confidence            34679999999999999999999999999999875322111111111  1235677778886542     1      258


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      |++||+|+.   ......    .++-...+++|+.++..+++++...    + .++|++||..
T Consensus       186 D~ViHlAa~---~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~  236 (436)
T PLN02166        186 DQIYHLACP---ASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSE  236 (436)
T ss_pred             CEEEECcee---ccchhh----ccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHH
Confidence            999999986   222111    1234577899999999999887643    2 3899999865

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.02  E-value=1.7e-09  Score=80.39  Aligned_cols=126  Identities=17%  Similarity=0.159  Sum_probs=92.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh--HH--HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR--LS--RFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~--~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +|++||||-+|--|.-+++.|+++||.|..+.|..+.  ..  .+. .+......+++++.+|++|...+.++++++   
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~-~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLY-EDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceec-cccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            6899999999999999999999999999999775322  11  111 111213446899999999999999999987   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC  151 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  151 (167)
                       ++|-+.|.++.+|       ...+.++...+.+++..|+++++.+.--.-  ....++..-||
T Consensus        78 -~PdEIYNLaAQS~-------V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQASt  131 (345)
T COG1089          78 -QPDEIYNLAAQSH-------VGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQAST  131 (345)
T ss_pred             -Cchhheecccccc-------ccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEeccc
Confidence             6899999998722       234456667778899999999988865332  11245555544

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.01  E-value=2.4e-09  Score=82.98  Aligned_cols=128  Identities=16%  Similarity=0.147  Sum_probs=90.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++.+++||||+|-+|+.++++|.+.+  .++.+.+..+.......+.+.. ...++..+.+|+.+..++.+++.      
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQ------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhcc------
Confidence            46889999999999999999999988  6888887655321111112211 35689999999999988877666      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      +. .+||++..   ..+ .+   -..+-+..+++|+.++..+.+.+...-    .-++|++||..-..+
T Consensus        76 ~~-~Vvh~aa~---~~~-~~---~~~~~~~~~~vNV~gT~nvi~~c~~~~----v~~lIYtSs~~Vvf~  132 (361)
T KOG1430|consen   76 GA-VVVHCAAS---PVP-DF---VENDRDLAMRVNVNGTLNVIEACKELG----VKRLIYTSSAYVVFG  132 (361)
T ss_pred             Cc-eEEEeccc---cCc-cc---cccchhhheeecchhHHHHHHHHHHhC----CCEEEEecCceEEeC
Confidence            45 66666654   122 22   223567889999999988888876543    349999999765443

>PLN02778 3,5-epimerase/4-reductase

Probab=99.00  E-value=1.2e-08  Score=77.94  Aligned_cols=92  Identities=11%  Similarity=-0.003  Sum_probs=66.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.+|||||+|.||..++++|.++|++|+...                         .|+.+.+.++..+..    .++|
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~----~~~D   59 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDA----VKPT   59 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHh----cCCC
Confidence            46799999999999999999999999986421                         234455555544443    2689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHH
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLS  136 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  136 (167)
                      ++||+||.   ...... +...++-...+++|+.++..+++.+..
T Consensus        60 ~ViH~Aa~---~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~  100 (298)
T PLN02778         60 HVFNAAGV---TGRPNV-DWCESHKVETIRANVVGTLTLADVCRE  100 (298)
T ss_pred             EEEECCcc---cCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999997   321111 112244567899999999999998864

>PRK12320 hypothetical protein; Provisional

Probab=98.95  E-value=1.4e-08  Score=85.05  Aligned_cols=103  Identities=17%  Similarity=0.162  Sum_probs=76.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|.||..++++|+++|++|++++|.+...          ...++.++.+|++++. +.+++      ..+|.+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al------~~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELA------GEADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHh------cCCCEE
Confidence            489999999999999999999999999999864321          1235788999999873 43332      358999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ||+|+.   ....            ..++|+.++.++++.+.    +.+ .++|++||..
T Consensus        65 IHLAa~---~~~~------------~~~vNv~Gt~nLleAA~----~~G-vRiV~~SS~~  104 (699)
T PRK12320         65 IHLAPV---DTSA------------PGGVGITGLAHVANAAA----RAG-ARLLFVSQAA  104 (699)
T ss_pred             EEcCcc---Cccc------------hhhHHHHHHHHHHHHHH----HcC-CeEEEEECCC
Confidence            999986   2211            11478898888888764    333 4899999864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.94  E-value=1.4e-08  Score=76.91  Aligned_cols=106  Identities=10%  Similarity=0.058  Sum_probs=75.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC-ccEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF-VEVL   93 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-i~~l   93 (167)
                      ++||||+|.+|+.++++|+++|++|.++.|+++...          ...+..+.+|++|++++..+++....... +|.+
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v   71 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAV   71 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccCcCCceeEE
Confidence            799999999999999999999999999999876431          12345567899999999988864322234 8999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +++++.   .+.         ..+            ..+.+++.+++.+-.+||++||...
T Consensus        72 ~~~~~~---~~~---------~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~  108 (285)
T TIGR03649        72 YLVAPP---IPD---------LAP------------PMIKFIDFARSKGVRRFVLLSASII  108 (285)
T ss_pred             EEeCCC---CCC---------hhH------------HHHHHHHHHHHcCCCEEEEeecccc
Confidence            988764   210         000            1123444555555569999988543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.91  E-value=9.9e-09  Score=81.18  Aligned_cols=78  Identities=18%  Similarity=0.256  Sum_probs=60.7

Q ss_pred             CCCCcEEEEEcC----------------CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC
Q 031016            9 SSCRGIAAIVGV----------------GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS   72 (167)
Q Consensus         9 ~~~~~~~lItGa----------------~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~   72 (167)
                      .+.+|+++||||                +|.+|+++|++|+++|++|++++++.+ +.         ....  ...+|++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~~--~~~~dv~  252 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPAG--VKRIDVE  252 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCCC--cEEEccC
Confidence            357999999999                555999999999999999999988652 11         1111  3467999


Q ss_pred             CHHHHHHHHHHHHhcCCccEEEEcCCCC
Q 031016           73 DSRSVREAFEGVLSLGFVEVLVYNAYQP  100 (167)
Q Consensus        73 ~~~~~~~~~~~~~~~~~i~~lv~~ag~~  100 (167)
                      +.+++.+.+.+  .++++|++|+|||+.
T Consensus       253 ~~~~~~~~v~~--~~~~~DilI~~Aav~  278 (399)
T PRK05579        253 SAQEMLDAVLA--ALPQADIFIMAAAVA  278 (399)
T ss_pred             CHHHHHHHHHH--hcCCCCEEEEccccc
Confidence            98888776654  358899999999983

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.91  E-value=1.1e-08  Score=77.95  Aligned_cols=82  Identities=16%  Similarity=0.219  Sum_probs=63.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecCh---hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDL---GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++|+++|+|+ ||+|++++..|++.|++ |++.+|+.   ++.+++.+.+.. ....+....+|+++.+++++.+.   
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ-EVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh-cCCCceeEEechhhhhHHHhhhc---
Confidence            46899999999 69999999999999995 99999986   667777777754 33445566788887777665444   


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                         ..|++|||-..
T Consensus       199 ---~~DilINaTp~  209 (289)
T PRK12548        199 ---SSDILVNATLV  209 (289)
T ss_pred             ---cCCEEEEeCCC
Confidence               46999998854

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.88  E-value=2.4e-08  Score=75.41  Aligned_cols=98  Identities=13%  Similarity=0.017  Sum_probs=66.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++||||+|.||..+++.|+++|++|++++|++.......    .     ..  ..|+.. ...   .+   ....+|++|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-----~~--~~~~~~-~~~---~~---~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W-----EG--YKPWAP-LAE---SE---ALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c-----ee--eecccc-cch---hh---hcCCCCEEE
Confidence            589999999999999999999999999999876432211    0     00  112221 111   11   235799999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHH
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL  135 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  135 (167)
                      |+|+.   ....  ...+.+..+..+++|+.++..+.+++.
T Consensus        63 h~a~~---~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~   98 (292)
T TIGR01777        63 NLAGE---PIAD--KRWTEERKQEIRDSRIDTTRALVEAIA   98 (292)
T ss_pred             ECCCC---Cccc--ccCCHHHHHHHHhcccHHHHHHHHHHH
Confidence            99986   2211  223445667788999999888887765

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.76  E-value=1.5e-07  Score=67.49  Aligned_cols=83  Identities=22%  Similarity=0.216  Sum_probs=65.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++++++|+|++|++|+.+++.|+++|++|++++|+.++.+++.+.+....+.  ....+|..+.+++.+.+.      
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE--GVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC--cEEEeeCCCHHHHHHHHh------
Confidence            456899999999999999999999999999999999988888887776532333  345678888888776665      


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++|++...
T Consensus        97 ~~diVi~at~~  107 (194)
T cd01078          97 GADVVFAAGAA  107 (194)
T ss_pred             cCCEEEECCCC
Confidence            35887776644

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN00016 RNA-binding protein; Provisional

Probab=98.73  E-value=1.8e-07  Score=73.78  Aligned_cols=107  Identities=18%  Similarity=0.197  Sum_probs=71.2

Q ss_pred             CCcEEEEE----cCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH-------HHHHhhcCCcEEEEEeecCCHHHHHH
Q 031016           11 CRGIAAIV----GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA-------DEIAREEKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus        11 ~~~~~lIt----Ga~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~D~~~~~~~~~   79 (167)
                      ..++++||    ||+|.||..++++|+++|++|++++|+......+.       ..+.   ...+.++.+|++|   +++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS---SAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh---hcCceEEEecHHH---HHh
Confidence            45789999    99999999999999999999999999865432221       1121   1247788888865   333


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           80 AFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        80 ~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++.    ...+|++|++++.   .         .+           +    .+.++...++.+-.++|++||...
T Consensus       125 ~~~----~~~~d~Vi~~~~~---~---------~~-----------~----~~~ll~aa~~~gvkr~V~~SS~~v  168 (378)
T PLN00016        125 KVA----GAGFDVVYDNNGK---D---------LD-----------E----VEPVADWAKSPGLKQFLFCSSAGV  168 (378)
T ss_pred             hhc----cCCccEEEeCCCC---C---------HH-----------H----HHHHHHHHHHcCCCEEEEEccHhh
Confidence            332    2468999998764   1         11           1    222334444444459999998753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.73  E-value=2.4e-07  Score=78.15  Aligned_cols=102  Identities=12%  Similarity=-0.003  Sum_probs=75.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ..+||||++|-||+++++.|.++|++|..                         ...|++|.+.+++.+...    ++|.
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------~~~~l~d~~~v~~~i~~~----~pd~  431 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------GKGRLEDRSSLLADIRNV----KPTH  431 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------eccccccHHHHHHHHHhh----CCCE
Confidence            46999999999999999999999988731                         113677888887776654    6899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      +||+|+.   ... +-.+...++....+++|+.++..+++.+...    + .++|++||.
T Consensus       432 Vih~Aa~---~~~-~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~  482 (668)
T PLN02260        432 VFNAAGV---TGR-PNVDWCESHKVETIRANVVGTLTLADVCREN----G-LLMMNFATG  482 (668)
T ss_pred             EEECCcc---cCC-CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEEEccc
Confidence            9999987   221 1112234566788999999999999998643    2 356677664

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.72  E-value=9.5e-08  Score=70.38  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=66.1

Q ss_pred             cEEEEEcCCCc-hhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           13 GIAAIVGVGPN-LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+-.||..++| +|.++|++|+++|++|++++|+....        ......+.++.++  +.++..+.+.+  ..+.+|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~~~~~v~~i~v~--s~~~m~~~l~~--~~~~~D   83 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PEPHPNLSIIEIE--NVDDLLETLEP--LVKDHD   83 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CCCCCCeEEEEEe--cHHHHHHHHHH--HhcCCC
Confidence            46677766655 99999999999999999998754210        0012245555543  22222222222  236789


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHH
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGA  127 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  127 (167)
                      ++||+||.   ....+....+.++|.+++++|.+..
T Consensus        84 ivIh~AAv---sd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAV---SDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCcc---CCceehhhhhhhhhhhhhhhhhhhc
Confidence            99999998   4445666677889999988876643

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.69  E-value=1.3e-07  Score=74.71  Aligned_cols=76  Identities=14%  Similarity=0.159  Sum_probs=59.2

Q ss_pred             CCCcEEEEEcC---------------CCc-hhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC
Q 031016           10 SCRGIAAIVGV---------------GPN-LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD   73 (167)
Q Consensus        10 ~~~~~~lItGa---------------~~~-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~   73 (167)
                      +.+|.++||||               ++| +|.+++++|..+|++|++++++....          .+..+  ..+|+++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~~~--~~~~v~~  250 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPPGV--KSIKVST  250 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCCCc--EEEEecc
Confidence            57899999999               556 99999999999999999988654321          11222  4679999


Q ss_pred             HHHH-HHHHHHHHhcCCccEEEEcCCC
Q 031016           74 SRSV-REAFEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        74 ~~~~-~~~~~~~~~~~~i~~lv~~ag~   99 (167)
                      .+++ ++++++.  .+++|++|+|||+
T Consensus       251 ~~~~~~~~~~~~--~~~~D~~i~~Aav  275 (390)
T TIGR00521       251 AEEMLEAALNEL--AKDFDIFISAAAV  275 (390)
T ss_pred             HHHHHHHHHHhh--cccCCEEEEcccc
Confidence            8888 6666444  4679999999998

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.66  E-value=7e-07  Score=69.19  Aligned_cols=122  Identities=16%  Similarity=0.159  Sum_probs=85.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChh---hHHHHHHHHH------hhcCCcEEEEEeecCCH------HH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLG---RLSRFADEIA------REEKSQVFAIRIDCSDS------RS   76 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~---~~~~~~~~l~------~~~~~~~~~~~~D~~~~------~~   76 (167)
                      +++++|||||.+|..+..+|+.+- ++|+...|-.+   ...++.+.+.      .....++..+..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999864 59999877433   2333333333      11466899999999943      33


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCce-EEEecCCccc
Q 031016           77 VREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGT-IIFTGCSASL  155 (167)
Q Consensus        77 ~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~-iv~iss~~~~  155 (167)
                      .+++.+      .+|.+|||++..+  ..        ....+....|+.|+..+++.+.     +++++ +.+|||++..
T Consensus        81 ~~~La~------~vD~I~H~gA~Vn--~v--------~pYs~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE------NVDLIIHNAALVN--HV--------FPYSELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh------hcceEEecchhhc--cc--------CcHHHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeeeec
Confidence            333333      5899999998622  11        2356678899999988888764     22344 9999997743

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.61  E-value=1.1e-06  Score=79.45  Aligned_cols=129  Identities=16%  Similarity=0.125  Sum_probs=84.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC----CeEEEEecChhhHH---HHHHHHHhh------cCCcEEEEEeecCCHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG----YTVAILARDLGRLS---RFADEIARE------EKSQVFAIRIDCSDSRSV   77 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g----~~v~~~~r~~~~~~---~~~~~l~~~------~~~~~~~~~~D~~~~~~~   77 (167)
                      ..++++|||++|.+|..+++.|++++    ++|+.+.|+.....   .+.+.+...      ...++.++.+|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35789999999999999999999887    68888888754322   222222210      123688999999864210


Q ss_pred             --HHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           78 --REAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        78 --~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                        .....++  ...+|.+||+|+.   ...    ..   .++.....|+.++..+++.+...    +..+++++||....
T Consensus      1050 l~~~~~~~l--~~~~d~iiH~Aa~---~~~----~~---~~~~~~~~nv~gt~~ll~~a~~~----~~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1050 LSDEKWSDL--TNEVDVIIHNGAL---VHW----VY---PYSKLRDANVIGTINVLNLCAEG----KAKQFSFVSSTSAL 1113 (1389)
T ss_pred             cCHHHHHHH--HhcCCEEEECCcE---ecC----cc---CHHHHHHhHHHHHHHHHHHHHhC----CCceEEEEeCeeec
Confidence              1111222  1368999999987   321    11   23445568999999998876532    22489999996543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.52  E-value=1.7e-05  Score=65.12  Aligned_cols=102  Identities=12%  Similarity=0.144  Sum_probs=76.2

Q ss_pred             CCCCCcEEEEEcCC-CchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVG-PNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus         8 ~~~~~~~~lItGa~-~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      ....+++++|||++ +.||.+++.+|++.|++|+++..+ .+...+..+.|-..   ++..+.++..+.++-.+++.+++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            34578999999998 899999999999999999998543 34445555555432   56679999999999999999999


Q ss_pred             HHH-hc----C----------CccEEEEcCCCCCCCCCCCCCCCC
Q 031016           83 GVL-SL----G----------FVEVLVYNAYQPVSWQPTNFTEIS  112 (167)
Q Consensus        83 ~~~-~~----~----------~i~~lv~~ag~~~~~~~~~~~~~~  112 (167)
                      .+. +.    |          .++.++--|.+   ...+.+.+..
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp---~v~G~l~~ag  513 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAP---RVSGELADAG  513 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccC---CccCccccCC
Confidence            885 21    1          36777777776   3344454443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.50  E-value=1.9e-06  Score=64.62  Aligned_cols=124  Identities=23%  Similarity=0.270  Sum_probs=90.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ..|-++-|.||+|-+|+.++.+|++-|.+|++-.|-.+-...-.+.+.  .-+|+.++..|+.|++++++++..-     
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG--dLGQvl~~~fd~~DedSIr~vvk~s-----  131 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG--DLGQVLFMKFDLRDEDSIRAVVKHS-----  131 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc--cccceeeeccCCCCHHHHHHHHHhC-----
Confidence            467889999999999999999999999999998885432111111111  1247999999999999999999864     


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                       +++||.-|.  .++.+.+   +-+      ++|..++-.+++.+-..-.+    ++|.+|+..+..
T Consensus       132 -NVVINLIGr--d~eTknf---~f~------Dvn~~~aerlAricke~GVe----rfIhvS~Lganv  182 (391)
T KOG2865|consen  132 -NVVINLIGR--DYETKNF---SFE------DVNVHIAERLARICKEAGVE----RFIHVSCLGANV  182 (391)
T ss_pred             -cEEEEeecc--ccccCCc---ccc------cccchHHHHHHHHHHhhChh----heeehhhccccc
Confidence             899999997  2333333   323      36888887777776544333    899998876543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.40  E-value=3e-06  Score=62.30  Aligned_cols=74  Identities=23%  Similarity=0.308  Sum_probs=57.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++|+||+|.+|+.+++.|++.+++|.++.|+...  +..+.++. .+  +.++.+|+.|++++.++++      .+|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~-~g--~~vv~~d~~~~~~l~~al~------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA-LG--AEVVEADYDDPESLVAALK------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH-TT--TEEEES-TT-HHHHHHHHT------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc-cc--ceEeecccCCHHHHHHHHc------CCceEE
Confidence            6899999999999999999999999999998732  22333433 33  3567999999999988777      579999


Q ss_pred             EcCCC
Q 031016           95 YNAYQ   99 (167)
Q Consensus        95 ~~ag~   99 (167)
                      ++.+.
T Consensus        70 ~~~~~   74 (233)
T PF05368_consen   70 SVTPP   74 (233)
T ss_dssp             EESSC
T ss_pred             eecCc
Confidence            88876

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.34  E-value=4.9e-06  Score=65.40  Aligned_cols=76  Identities=21%  Similarity=0.329  Sum_probs=65.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +.++|.|+ |++|+.+|..|++.| .+|.+.+|+.++..+....    ...++....+|+.+.+.+.+++++      .|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~----~~~~v~~~~vD~~d~~al~~li~~------~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL----IGGKVEALQVDAADVDALVALIKD------FD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh----ccccceeEEecccChHHHHHHHhc------CC
Confidence            56899999 999999999999999 7999999998887776654    234899999999999999888884      39


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      ++||++..
T Consensus        71 ~VIn~~p~   78 (389)
T COG1748          71 LVINAAPP   78 (389)
T ss_pred             EEEEeCCc
Confidence            99999875

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.34  E-value=3.7e-06  Score=62.94  Aligned_cols=118  Identities=16%  Similarity=0.122  Sum_probs=78.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ..+++++||||+|.||.++|.+|..+|+.|++++.-.....+..+.+-  ....+....-|+..+     ++.+      
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~--~~~~fel~~hdv~~p-----l~~e------   91 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI--GHPNFELIRHDVVEP-----LLKE------   91 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc--cCcceeEEEeechhH-----HHHH------
Confidence            467899999999999999999999999999998764433332222221  223456666677655     4443      


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      +|-++|.|..   ..+.....    .-.+++.+|..++...+..+-+..     .|++..|+.
T Consensus        92 vD~IyhLAap---asp~~y~~----npvktIktN~igtln~lglakrv~-----aR~l~aSTs  142 (350)
T KOG1429|consen   92 VDQIYHLAAP---ASPPHYKY----NPVKTIKTNVIGTLNMLGLAKRVG-----ARFLLASTS  142 (350)
T ss_pred             hhhhhhhccC---CCCccccc----CccceeeecchhhHHHHHHHHHhC-----ceEEEeecc
Confidence            4777888876   22222221    234567899999998888765443     477776653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.32  E-value=1.2e-05  Score=60.11  Aligned_cols=117  Identities=13%  Similarity=0.129  Sum_probs=66.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++|||++|-||++++.+|.+.|+.|+++.|++.+.....       ...+.       ..+.+....+     .++|++|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-------~~~v~-------~~~~~~~~~~-----~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-------HPNVT-------LWEGLADALT-----LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-------Ccccc-------ccchhhhccc-----CCCCEEE
Confidence            589999999999999999999999999999876533211       11111       1122221111     2799999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCC
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIA  159 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~  159 (167)
                      |-||-  .....   .-+.+.=+..++.-+..+    +.+...+.+.. +.++..=+|..|..|..
T Consensus        62 NLAG~--~I~~r---rWt~~~K~~i~~SRi~~T----~~L~e~I~~~~~~P~~~isaSAvGyYG~~  118 (297)
T COG1090          62 NLAGE--PIAER---RWTEKQKEEIRQSRINTT----EKLVELIAASETKPKVLISASAVGYYGHS  118 (297)
T ss_pred             ECCCC--ccccc---cCCHHHHHHHHHHHhHHH----HHHHHHHHhccCCCcEEEecceEEEecCC
Confidence            99997  11111   134444455555555544    44444444322 22333333444555443

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.32  E-value=4.2e-06  Score=66.22  Aligned_cols=75  Identities=27%  Similarity=0.490  Sum_probs=59.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC-C-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEG-Y-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g-~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ++|.|+ |.+|+.+++.|++++ . +|++.+|+.++++++.+.+   .+.++....+|+.|.+++++++++      .|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~~------~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLRG------CDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHTT------SSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHhc------CCE
Confidence            589999 999999999999986 4 8999999999988887665   456899999999999998887773      499


Q ss_pred             EEEcCCC
Q 031016           93 LVYNAYQ   99 (167)
Q Consensus        93 lv~~ag~   99 (167)
                      +||++|.
T Consensus        71 Vin~~gp   77 (386)
T PF03435_consen   71 VINCAGP   77 (386)
T ss_dssp             EEE-SSG
T ss_pred             EEECCcc
Confidence            9999986

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.31  E-value=9.4e-06  Score=65.06  Aligned_cols=127  Identities=13%  Similarity=0.119  Sum_probs=88.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcC---CeEEEEecChh-----------hHHHHHHHHHhhc---CCcEEEEEeecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEG---YTVAILARDLG-----------RLSRFADEIAREE---KSQVFAIRIDCS   72 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g---~~v~~~~r~~~-----------~~~~~~~~l~~~~---~~~~~~~~~D~~   72 (167)
                      ..+|+++||||+|.+|+-+.++|+..-   -+++++-|...           ..+.+.+.+++..   -.++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            378999999999999999999999742   26777766421           1113333343322   236788888988


Q ss_pred             CHH------HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceE
Q 031016           73 DSR------SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTI  146 (167)
Q Consensus        73 ~~~------~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i  146 (167)
                      +++      +.+.+.      ..++++||+|+.   .   .    ..|-++..+.+|.+|+..+.+.+-...+-+   .+
T Consensus        90 ~~~LGis~~D~~~l~------~eV~ivih~AAt---v---r----Fde~l~~al~iNt~Gt~~~l~lak~~~~l~---~~  150 (467)
T KOG1221|consen   90 EPDLGISESDLRTLA------DEVNIVIHSAAT---V---R----FDEPLDVALGINTRGTRNVLQLAKEMVKLK---AL  150 (467)
T ss_pred             CcccCCChHHHHHHH------hcCCEEEEeeee---e---c----cchhhhhhhhhhhHhHHHHHHHHHHhhhhh---eE
Confidence            643      333222      368999999987   2   1    136678899999999999988877655443   88


Q ss_pred             EEecCCccc
Q 031016          147 IFTGCSASL  155 (167)
Q Consensus       147 v~iss~~~~  155 (167)
                      |.+|...+.
T Consensus       151 vhVSTAy~n  159 (467)
T KOG1221|consen  151 VHVSTAYSN  159 (467)
T ss_pred             EEeehhhee
Confidence            999876654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.29  E-value=1e-05  Score=54.77  Aligned_cols=76  Identities=20%  Similarity=0.284  Sum_probs=57.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++++.++|.|+ ||.|+++++.|.+.|++ |.++.|+.++++++.+.+.   +..+...  ++.+   +.+.+.     
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~--~~~~---~~~~~~-----   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAI--PLED---LEEALQ-----   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEE--EGGG---HCHHHH-----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---cccccee--eHHH---HHHHHh-----
Confidence            467999999998 89999999999999995 9999999999988888772   2334444  3332   223333     


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                       ..|++|++.+.
T Consensus        75 -~~DivI~aT~~   85 (135)
T PF01488_consen   75 -EADIVINATPS   85 (135)
T ss_dssp             -TESEEEE-SST
T ss_pred             -hCCeEEEecCC
Confidence             57999999876

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.29  E-value=1.2e-05  Score=62.07  Aligned_cols=120  Identities=8%  Similarity=-0.010  Sum_probs=75.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      ++.+.+.|+|++|.+|..++..|+.++  .++++++++..  +....++.. ....  ....+.+++.+..+.+.     
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~--~g~a~Dl~~-~~~~--~~v~~~td~~~~~~~l~-----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA--PGVAADLSH-IDTP--AKVTGYADGELWEKALR-----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC--cccccchhh-cCcC--ceEEEecCCCchHHHhC-----
Confidence            356689999999999999999999655  47999998322  211112322 2222  23346666544333333     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       ..|++|+++|.    +..+     .+.+.+.++.|+...-.+    .+.|.+.+.-++|+++|..
T Consensus        76 -gaDvVVitaG~----~~~~-----~~tR~dll~~N~~i~~~i----~~~i~~~~~~~iviv~SNP  127 (321)
T PTZ00325         76 -GADLVLICAGV----PRKP-----GMTRDDLFNTNAPIVRDL----VAAVASSAPKAIVGIVSNP  127 (321)
T ss_pred             -CCCEEEECCCC----CCCC-----CCCHHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEecCc
Confidence             57999999997    2222     234677788898866444    4455555545777777643

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.28  E-value=1.3e-05  Score=59.95  Aligned_cols=72  Identities=17%  Similarity=0.148  Sum_probs=61.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++||||+|.+|.+++++|.++|++|.+..|+++....+.        ..+.....|+.++..+...+.      .++.+
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~------G~~~~   67 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAK------GVDGV   67 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhc------cccEE
Confidence            4899999999999999999999999999999988766543        467888899999999887777      46888


Q ss_pred             EEcCCC
Q 031016           94 VYNAYQ   99 (167)
Q Consensus        94 v~~ag~   99 (167)
                      ++..+.
T Consensus        68 ~~i~~~   73 (275)
T COG0702          68 LLISGL   73 (275)
T ss_pred             EEEecc
Confidence            777776

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.26  E-value=6.8e-06  Score=63.26  Aligned_cols=79  Identities=18%  Similarity=0.275  Sum_probs=68.4

Q ss_pred             EEEEcCCCchhHHHHHHHHH----cCCeEEEEecChhhHHHHHHHHHhhcCC---cEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           15 AAIVGVGPNLGRSIARKFAH----EGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      ++|.||+|--|..+++++..    .+.++.+.+|+++++++.++.+....+.   +..++.+|.+|+++++++..+.   
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~---   84 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA---   84 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh---
Confidence            89999999999999999998    6788999999999999999988764322   2338889999999999999865   


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                         .++|||+|.
T Consensus        85 ---~vivN~vGP   93 (423)
T KOG2733|consen   85 ---RVIVNCVGP   93 (423)
T ss_pred             ---EEEEecccc
Confidence               899999996

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.25  E-value=9.3e-06  Score=65.45  Aligned_cols=75  Identities=16%  Similarity=0.139  Sum_probs=56.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +++|+++|+|+++ +|+++++.|+++|++|.+.+++. +..++..+.+.. .+  +.++..|..+.        .   .+
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~--~~~~~~~~~~~--------~---~~   67 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LG--IELVLGEYPEE--------F---LE   67 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cC--CEEEeCCcchh--------H---hh
Confidence            4689999999877 99999999999999999998875 344454555543 33  45666777651        1   14


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|.+|+++|.
T Consensus        68 ~~d~vv~~~g~   78 (450)
T PRK14106         68 GVDLVVVSPGV   78 (450)
T ss_pred             cCCEEEECCCC
Confidence            68999999997

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.23  E-value=1.4e-05  Score=63.13  Aligned_cols=132  Identities=13%  Similarity=0.132  Sum_probs=82.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHH-HHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSV-REAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~   88 (167)
                      .+..+++|+||+|.+|+-+++.|.++|+.|....|+.+...++.. +.. ......-+..|...+.+. ...++.+  .-
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~-~d~~~~~v~~~~~~~~d~~~~~~~~~--~~  152 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFF-VDLGLQNVEADVVTAIDILKKLVEAV--PK  152 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccc-cccccceeeeccccccchhhhhhhhc--cc
Confidence            367889999999999999999999999999999999888777765 111 111233334444443333 3333322  11


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA  159 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  159 (167)
                      ...+++.++|.   .+..-       +...-+++.+.+..++.+++-..-    --++|++|++.+.....
T Consensus       153 ~~~~v~~~~gg---rp~~e-------d~~~p~~VD~~g~knlvdA~~~aG----vk~~vlv~si~~~~~~~  209 (411)
T KOG1203|consen  153 GVVIVIKGAGG---RPEEE-------DIVTPEKVDYEGTKNLVDACKKAG----VKRVVLVGSIGGTKFNQ  209 (411)
T ss_pred             cceeEEecccC---CCCcc-------cCCCcceecHHHHHHHHHHHHHhC----CceEEEEEeecCcccCC
Confidence            24566777765   33221       122223455666666677763332    33999999888765543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.15  E-value=0.00019  Score=49.83  Aligned_cols=139  Identities=17%  Similarity=0.149  Sum_probs=89.3

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h--cC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S--LG   88 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~--~~   88 (167)
                      ...++|.|+-|.+|.+.++.|-..+|-|.-++-.++.           ....-..+..|-+=-+.-+.+++++. .  ..
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe-----------~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE-----------QADSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc-----------cccceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            3568999999999999999999999988777654331           01112333333332344455666664 2  34


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCC-HHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEIS-FDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++|.+++.||.   +..+....-+ .+..+-++...+-..-...+..-.+++.  +|-+-....-+++-|.|++..|+.
T Consensus        72 kvDav~CVAGG---WAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGM  145 (236)
T KOG4022|consen   72 KVDAVFCVAGG---WAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGM  145 (236)
T ss_pred             ccceEEEeecc---ccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhH
Confidence            89999999998   7665443222 1344445555554444445555555544  467777777777888899998875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.14  E-value=4.4e-05  Score=53.81  Aligned_cols=108  Identities=18%  Similarity=0.238  Sum_probs=78.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      +.|.||+|-.|..+.++...+|+.|..+.|+++++...         ..+..+..|+.|++++.+.+.      ..|.+|
T Consensus         3 IaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~------g~DaVI   67 (211)
T COG2910           3 IAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLA------GHDAVI   67 (211)
T ss_pred             EEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhc------CCceEE
Confidence            67899999999999999999999999999998865432         246778899999998866555      689999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      ..-|.   ...+.      ++.  .        ....+.++..++..+..|++.++...++.
T Consensus        68 sA~~~---~~~~~------~~~--~--------~k~~~~li~~l~~agv~RllVVGGAGSL~  110 (211)
T COG2910          68 SAFGA---GASDN------DEL--H--------SKSIEALIEALKGAGVPRLLVVGGAGSLE  110 (211)
T ss_pred             EeccC---CCCCh------hHH--H--------HHHHHHHHHHHhhcCCeeEEEEcCccceE
Confidence            99987   32111      111  0        11145555556665666888887766544

>PRK09620 hypothetical protein; Provisional

Probab=98.14  E-value=5.3e-06  Score=61.10  Aligned_cols=81  Identities=15%  Similarity=0.215  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCC----------------CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH
Q 031016           11 CRGIAAIVGVG----------------PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus        11 ~~~~~lItGa~----------------~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .||.++||+|.                |.+|.++|++|+++|++|+++++.......   .+.  .+.....+..    .
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~--~~~~~~~V~s----~   72 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN--NQLELHPFEG----I   72 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC--CceeEEEEec----H
Confidence            58999999886                999999999999999999988764221100   000  0112222332    1


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCC
Q 031016           75 RSVREAFEGVLSLGFVEVLVYNAYQP  100 (167)
Q Consensus        75 ~~~~~~~~~~~~~~~i~~lv~~ag~~  100 (167)
                      .++...+.++....++|++||+|+..
T Consensus        73 ~d~~~~l~~~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         73 IDLQDKMKSIITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHHHHHHHhcccCCCEEEECcccc
Confidence            22222333332123689999999983

>PLN00106 malate dehydrogenase

Probab=98.05  E-value=4.1e-05  Score=59.22  Aligned_cols=120  Identities=6%  Similarity=-0.020  Sum_probs=73.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+.+.|+|++|.+|..++..|+.++.  .+++++.++... + ...+.. .....  ...++++.++..+.+.      
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g-~-a~Dl~~-~~~~~--~i~~~~~~~d~~~~l~------   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPG-V-AADVSH-INTPA--QVRGFLGDDQLGDALK------   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCe-e-Echhhh-CCcCc--eEEEEeCCCCHHHHcC------
Confidence            346799999999999999999997764  799999876211 1 112222 11111  2235443433433333      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ..|++|++||.    +..+     .+.+++.+..|+.....+.+.    +.+.+...+|+++|...
T Consensus        86 ~aDiVVitAG~----~~~~-----g~~R~dll~~N~~i~~~i~~~----i~~~~p~aivivvSNPv  138 (323)
T PLN00106         86 GADLVIIPAGV----PRKP-----GMTRDDLFNINAGIVKTLCEA----VAKHCPNALVNIISNPV  138 (323)
T ss_pred             CCCEEEEeCCC----CCCC-----CCCHHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEeCCCc
Confidence            58999999998    2222     134677888888876555554    44444345666655443

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.01  E-value=3.7e-05  Score=59.67  Aligned_cols=48  Identities=23%  Similarity=0.458  Sum_probs=40.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHc-C-CeEEEEecChhhHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHE-G-YTVAILARDLGRLSRFADEI   56 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~l   56 (167)
                      .+.+|+++||||+|.||..+|++|+++ | .+++++.|+.+++.++.+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            357899999999999999999999865 5 48999999888777665544

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.98  E-value=3.7e-05  Score=59.56  Aligned_cols=115  Identities=11%  Similarity=0.084  Sum_probs=66.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC-------CeEEEEecChhh--HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG-------YTVAILARDLGR--LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g-------~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .++||||+|.+|..++..|+.++       .+|+++++++..  ++...-.+..  .  ......|+....+..+.+   
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d--~--~~~~~~~~~~~~~~~~~l---   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQD--C--AFPLLKSVVATTDPEEAF---   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhh--c--cccccCCceecCCHHHHh---
Confidence            48999999999999999999854       489999986531  2211111110  0  001111322222222222   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEecC
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTGC  151 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss  151 (167)
                         ...|++|++||.   . ..+  ..+.   .+.++.|+.    +++.+.+.+.+.  +.+.++++|.
T Consensus        77 ---~~aDiVI~tAG~---~-~~~--~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          77 ---KDVDVAILVGAM---P-RKE--GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             ---CCCCEEEEeCCc---C-CCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence               468999999998   2 222  2232   455677766    556666666655  2567777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.93  E-value=2.5e-05  Score=57.60  Aligned_cols=119  Identities=17%  Similarity=0.157  Sum_probs=82.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-----hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-----GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ..|++||||-+|-=|..+++.|+.+||.|..+-|..     .+.+.+...-..+.++.....-.|+||...+.+++..+ 
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-
Confidence            467999999999999999999999999998875532     33443333333335667888889999999999999987 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE  140 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  140 (167)
                         +++-+.|.|+..|   ..-    +-+-.+-.-++...|+++++.++-.+-..
T Consensus       106 ---kPtEiYnLaAQSH---Vkv----SFdlpeYTAeVdavGtLRlLdAi~~c~l~  150 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSH---VKV----SFDLPEYTAEVDAVGTLRLLDAIRACRLT  150 (376)
T ss_pred             ---Cchhhhhhhhhcc---eEE----EeecccceeeccchhhhhHHHHHHhcCcc
Confidence               5677778887743   111    11111223456677888888776655443

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.86  E-value=4.5e-05  Score=61.43  Aligned_cols=76  Identities=16%  Similarity=0.103  Sum_probs=51.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.+|+++|+|+++ +|++.++.|+++|++|++.+++........+.+.. .+.++  ...+  ++.++   +.     ..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-~g~~~--~~~~--~~~~~---~~-----~~   68 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-EGIKV--ICGS--HPLEL---LD-----ED   68 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-cCCEE--EeCC--CCHHH---hc-----Cc
Confidence            4689999999975 99999999999999999998765443344444543 33322  2111  12211   11     14


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|.+|+++|+
T Consensus        69 ~d~vV~s~gi   78 (447)
T PRK02472         69 FDLMVKNPGI   78 (447)
T ss_pred             CCEEEECCCC
Confidence            8999999998

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.80  E-value=0.00022  Score=53.88  Aligned_cols=73  Identities=16%  Similarity=0.251  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+|.++|+|+ ||+|++++..|++.|++|.+.+|+.++.+++.+.+.. .+ ......  .   ++.        .....
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~-~~-~~~~~~--~---~~~--------~~~~~  179 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR-YG-EIQAFS--M---DEL--------PLHRV  179 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh-cC-ceEEec--h---hhh--------cccCc
Confidence            5789999999 6999999999999999999999998888888777654 22 122221  1   110        11358


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++||+.+.
T Consensus       180 DivInatp~  188 (270)
T TIGR00507       180 DLIINATSA  188 (270)
T ss_pred             cEEEECCCC
Confidence            999999976

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.77  E-value=0.00082  Score=51.70  Aligned_cols=112  Identities=13%  Similarity=0.156  Sum_probs=71.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhc---CCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREE---KSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.|.|+ |++|..++..|+.+|  .+|++++++++..+.....+....   +......   ..+.+.       +   .
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~~-------l---~   67 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYSD-------C---K   67 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHHH-------h---C
Confidence            4788897 899999999999998  479999999888777777665421   2222222   122221       1   3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      .-|++|+++|.    +..+  ..+.   .+.++.|..    +.+...+.+.+.. .+.++++|-.
T Consensus        68 ~aDIVIitag~----~~~~--g~~R---~dll~~N~~----i~~~~~~~i~~~~~~~~vivvsNP  119 (306)
T cd05291          68 DADIVVITAGA----PQKP--GETR---LDLLEKNAK----IMKSIVPKIKASGFDGIFLVASNP  119 (306)
T ss_pred             CCCEEEEccCC----CCCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecCh
Confidence            67999999997    3333  2233   344666665    4455555555543 5677777653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.75  E-value=0.0014  Score=50.11  Aligned_cols=80  Identities=24%  Similarity=0.153  Sum_probs=56.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+. .    .+..   ...|..+.+..+.+.... ...++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~~~~---~~~~~~~~~~~~~~~~~~-~~~~~  236 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-E----LGAD---YVIDYRKEDFVREVRELT-GKRGV  236 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H----cCCC---eEEecCChHHHHHHHHHh-CCCCC
Confidence            4688999999999999999999999999999988876655432 1    2222   123666555555444332 22469


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++++++|.
T Consensus       237 d~~i~~~g~  245 (342)
T cd08266         237 DVVVEHVGA  245 (342)
T ss_pred             cEEEECCcH
Confidence            999999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.73  E-value=0.00032  Score=48.22  Aligned_cols=74  Identities=18%  Similarity=0.240  Sum_probs=54.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .++++++|+|+ |++|.++++.|.+.| .+|.+.+|+.++.+++.+.+.. ..     +..+.++.++.   +      .
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~---~------~   80 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE-LG-----IAIAYLDLEEL---L------A   80 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh-cc-----cceeecchhhc---c------c
Confidence            45788999998 899999999999986 6899999998887777766543 11     22344443322   1      4


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++|++...
T Consensus        81 ~~Dvvi~~~~~   91 (155)
T cd01065          81 EADLIINTTPV   91 (155)
T ss_pred             cCCEEEeCcCC
Confidence            68999999976

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.70  E-value=0.0015  Score=44.50  Aligned_cols=112  Identities=14%  Similarity=0.176  Sum_probs=71.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cC-CcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EK-SQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.|+|++|.+|..++..|..++.  ++++++++++.++....+++..  .. .......   .+.+.+          ..
T Consensus         3 V~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~----------~~   69 (141)
T PF00056_consen    3 VAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL----------KD   69 (141)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG----------TT
T ss_pred             EEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc----------cc
Confidence            78999999999999999999874  7999999987777665555532  11 1222222   333332          35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      -|++|.++|.    +..+-  .+   -.+.++.|..-    .+.+.+.+.+.. .+.++.+|..
T Consensus        70 aDivvitag~----~~~~g--~s---R~~ll~~N~~i----~~~~~~~i~~~~p~~~vivvtNP  120 (141)
T PF00056_consen   70 ADIVVITAGV----PRKPG--MS---RLDLLEANAKI----VKEIAKKIAKYAPDAIVIVVTNP  120 (141)
T ss_dssp             ESEEEETTST----SSSTT--SS---HHHHHHHHHHH----HHHHHHHHHHHSTTSEEEE-SSS
T ss_pred             ccEEEEeccc----ccccc--cc---HHHHHHHhHhH----HHHHHHHHHHhCCccEEEEeCCc
Confidence            7999999997    22222  23   34446667664    455555555443 4677777643

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd00704 MDH Malate dehydrogenase

Probab=97.65  E-value=0.00081  Score=52.14  Aligned_cols=107  Identities=10%  Similarity=0.081  Sum_probs=66.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHH-------HH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSR-------SV   77 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-------~~   77 (167)
                      .+.|+||+|.+|..++..|+.+|.       .++++++++  +.++               ....|+.|..       .+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~---------------g~~~Dl~d~~~~~~~~~~i   66 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE---------------GVVMELQDCAFPLLKGVVI   66 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc---------------eeeeehhhhcccccCCcEE
Confidence            478999999999999999998663       388998876  3322               2223333321       00


Q ss_pred             -HHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEecC
Q 031016           78 -REAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTGC  151 (167)
Q Consensus        78 -~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss  151 (167)
                       ....+   .....|++|++||.    +..+-  .+   -.+.++.|+.    +++.+.+.+.+.  +.+.++++|-
T Consensus        67 ~~~~~~---~~~~aDiVVitAG~----~~~~g--~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          67 TTDPEE---AFKDVDVAILVGAF----PRKPG--ME---RADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             ecChHH---HhCCCCEEEEeCCC----CCCcC--Cc---HHHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence             00111   22468999999997    33332  23   3445666765    667777777666  3567777763

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06849 hypothetical protein; Provisional

Probab=97.63  E-value=0.00089  Score=53.12  Aligned_cols=83  Identities=19%  Similarity=0.234  Sum_probs=54.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.+++||||++..+|..+++.|.+.|++|++++.++.......+.+     .....+...-.+++...+.+.++.+-.++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d~~~~~p~p~~d~~~~~~~L~~i~~~~~i   77 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----DGFYTIPSPRWDPDAYIQALLSIVQRENI   77 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----hheEEeCCCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999999999999999999999999988765443222222     12222322333444444444444422358


Q ss_pred             cEEEEcCC
Q 031016           91 EVLVYNAY   98 (167)
Q Consensus        91 ~~lv~~ag   98 (167)
                      |.+|.+..
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99988765

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.62  E-value=0.00077  Score=52.27  Aligned_cols=111  Identities=7%  Similarity=0.016  Sum_probs=68.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-------eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHH--HHH--HH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-------TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVR--EAF--EG   83 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~--~~~--~~   83 (167)
                      +.|+|++|.+|..++..|+.++.       .++++++++...             .......|+.|.....  ...  ..
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------ccceeEeehhcccchhcCceeccCC
Confidence            78999999999999999998653       488998864421             0122233444433110  000  01


Q ss_pred             HH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEecC
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTGC  151 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss  151 (167)
                      .. .....|++|++||.    +..+     .+.+.+.++.|+.    +++.+.+.+.+.  +.+.++++|.
T Consensus        69 ~~~~~~~aDiVVitAG~----~~~~-----~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAF----PRKE-----GMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             hHHHhCCCCEEEEcCCC----CCCC-----CCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            11 23568999999997    2221     2335667777776    556666666665  3577777764

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.59  E-value=0.00049  Score=49.10  Aligned_cols=76  Identities=17%  Similarity=0.199  Sum_probs=48.2

Q ss_pred             CCcEEEEEcCC----------------CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH
Q 031016           11 CRGIAAIVGVG----------------PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus        11 ~~~~~lItGa~----------------~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .||.+|||+|.                |..|.++|+.++.+|++|+++..+.. ..         .+..+..+  ++.+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~---------~p~~~~~i--~v~sa   69 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP---------PPPGVKVI--RVESA   69 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEE--E-SSH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc---------ccccceEE--Eecch
Confidence            57889998874                78999999999999999999877642 11         12345444  56656


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCC
Q 031016           75 RSVREAFEGVLSLGFVEVLVYNAYQP  100 (167)
Q Consensus        75 ~~~~~~~~~~~~~~~i~~lv~~ag~~  100 (167)
                      +++.+.+.+..  +.-|++|++|++.
T Consensus        70 ~em~~~~~~~~--~~~Di~I~aAAVs   93 (185)
T PF04127_consen   70 EEMLEAVKELL--PSADIIIMAAAVS   93 (185)
T ss_dssp             HHHHHHHHHHG--GGGSEEEE-SB--
T ss_pred             hhhhhhhcccc--CcceeEEEecchh
Confidence            66655555443  4459999999983

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.56  E-value=0.0016  Score=49.68  Aligned_cols=48  Identities=21%  Similarity=0.304  Sum_probs=42.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAR   58 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~   58 (167)
                      ..+|.++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++.+.+..
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~  173 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA  173 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence            45788999998 7899999999999998 799999999999888888754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.53  E-value=0.0017  Score=51.32  Aligned_cols=75  Identities=21%  Similarity=0.282  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++.++|.|+ |.+|+..++.+...|++|++++|++++++.+.+.    .+..+   ..+..+++.+.+.+.      ..
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~----~g~~v---~~~~~~~~~l~~~l~------~a  231 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAE----FGGRI---HTRYSNAYEIEDAVK------RA  231 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHh----cCcee---EeccCCHHHHHHHHc------cC
Confidence            4567899988 7999999999999999999999987766554432    23222   234555555544433      57


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|++++.
T Consensus       232 DvVI~a~~~  240 (370)
T TIGR00518       232 DLLIGAVLI  240 (370)
T ss_pred             CEEEEcccc
Confidence            999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.51  E-value=0.00032  Score=53.20  Aligned_cols=49  Identities=16%  Similarity=0.204  Sum_probs=42.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAR   58 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~   58 (167)
                      ...+|.++|+|+ ||+|+++++.|.+.| .+|++.+|+.++.+++.+.+..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~  169 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA  169 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            356899999998 899999999999999 6899999999888888776643

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.50  E-value=0.00028  Score=58.21  Aligned_cols=47  Identities=21%  Similarity=0.354  Sum_probs=40.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI   56 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   56 (167)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            356899999999 69999999999999999999999888777766554

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.50  E-value=0.00055  Score=52.05  Aligned_cols=77  Identities=17%  Similarity=0.144  Sum_probs=54.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+++.+.+.. . ..+.    .+...++....      ..
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~-~-~~~~----~~~~~~~~~~~------~~  189 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ-V-GVIT----RLEGDSGGLAI------EK  189 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh-c-Ccce----eccchhhhhhc------cc
Confidence            45789999988 8999999999999997 799999999988888777643 1 1111    11111222111      24


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++||+...
T Consensus       190 ~~DiVInaTp~  200 (282)
T TIGR01809       190 AAEVLVSTVPA  200 (282)
T ss_pred             CCCEEEECCCC
Confidence            67999999865

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.47  E-value=0.0012  Score=50.34  Aligned_cols=79  Identities=16%  Similarity=0.261  Sum_probs=54.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+|.++|.|+ ||.+++++..|++.|+ ++.+..|+.++.+++.+.+....+.... ...+   ........      .
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~~------~  193 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDVI------A  193 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHHH------h
Confidence            45789999998 8999999999999997 7889999999888888776542222211 1122   22222112      2


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++||+...
T Consensus       194 ~~divINaTp~  204 (283)
T PRK14027        194 AADGVVNATPM  204 (283)
T ss_pred             hcCEEEEcCCC
Confidence            47999998754

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.46  E-value=0.0014  Score=50.87  Aligned_cols=79  Identities=14%  Similarity=0.115  Sum_probs=51.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +.++||+||+||+|...++.....|++++++..++++.+ .++.    .+.+..   .|..+++ +.+.+.++.....+|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~----lGAd~v---i~y~~~~-~~~~v~~~t~g~gvD  213 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE----LGADHV---INYREED-FVEQVRELTGGKGVD  213 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh----cCCCEE---EcCCccc-HHHHHHHHcCCCCce
Confidence            899999999999999999999999987777766555544 3333    344322   1333333 333333332113699


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      +++...|.
T Consensus       214 vv~D~vG~  221 (326)
T COG0604         214 VVLDTVGG  221 (326)
T ss_pred             EEEECCCH
Confidence            99999986

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.46  E-value=0.00021  Score=51.67  Aligned_cols=47  Identities=21%  Similarity=0.302  Sum_probs=40.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      .++++|+++|+|.+ .+|+.+++.|.+.|++|++.+++++..++..+.
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            35679999999995 899999999999999999999988776666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.43  E-value=0.0011  Score=51.24  Aligned_cols=44  Identities=9%  Similarity=0.048  Sum_probs=37.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD   54 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   54 (167)
                      .+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            47899999999999999998888899999988888776555443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.42  E-value=0.00077  Score=51.17  Aligned_cols=47  Identities=21%  Similarity=0.310  Sum_probs=42.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAR   58 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~   58 (167)
                      .++.++|.|| ||.+++++..|++.|+ ++.+..|+.++.+++.+.+..
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~  172 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGE  172 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            5799999999 7999999999999996 799999999999999888865

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=97.41  E-value=0.0004  Score=52.25  Aligned_cols=123  Identities=14%  Similarity=0.074  Sum_probs=83.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEe---cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG--YTVAILA---RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~---r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .+.++|||+.|-||..++..+...-  ++.+.++   .... +..+ ++..  ...+..++..|+.++..+..++..   
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l-~~~~--n~p~ykfv~~di~~~~~~~~~~~~---   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNL-EPVR--NSPNYKFVEGDIADADLVLYLFET---   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchh-hhhc--cCCCceEeeccccchHHHHhhhcc---
Confidence            4889999999999999999999863  4444442   1112 2222 2221  345789999999999888766654   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                       .++|.++|-|+..|   ..    .+--+--...+.|+.+...+.+.+.-...   .-++|.+|+.
T Consensus        79 -~~id~vihfaa~t~---vd----~s~~~~~~~~~nnil~t~~Lle~~~~sg~---i~~fvhvSTd  133 (331)
T KOG0747|consen   79 -EEIDTVIHFAAQTH---VD----RSFGDSFEFTKNNILSTHVLLEAVRVSGN---IRRFVHVSTD  133 (331)
T ss_pred             -CchhhhhhhHhhhh---hh----hhcCchHHHhcCCchhhhhHHHHHHhccC---eeEEEEeccc
Confidence             68999999998722   11    11112234467799999888888765432   2489999984

>PRK05086 malate dehydrogenase; Provisional

Probab=97.38  E-value=0.002  Score=49.73  Aligned_cols=116  Identities=10%  Similarity=0.062  Sum_probs=63.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHH-c--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           14 IAAIVGVGPNLGRSIARKFAH-E--GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~-~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++|+||+|++|.+++..+.. .  +..++++++++.. +...-.+.. .+... .+..  .+.+++.+.+      ...
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~-~~~~~-~i~~--~~~~d~~~~l------~~~   70 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSH-IPTAV-KIKG--FSGEDPTPAL------EGA   70 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhc-CCCCc-eEEE--eCCCCHHHHc------CCC
Confidence            489999999999999998865 3  3467888886432 111112211 11111 1221  1112222212      358


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      |++|.++|.++    .+-  .   .-.+.++.|....    +.+.+.|.+.+..++|.+.|..
T Consensus        71 DiVIitaG~~~----~~~--~---~R~dll~~N~~i~----~~ii~~i~~~~~~~ivivvsNP  120 (312)
T PRK05086         71 DVVLISAGVAR----KPG--M---DRSDLFNVNAGIV----KNLVEKVAKTCPKACIGIITNP  120 (312)
T ss_pred             CEEEEcCCCCC----CCC--C---CHHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCc
Confidence            99999999832    221  1   2345577777654    4555555555444566555543

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.36  E-value=0.0057  Score=45.20  Aligned_cols=78  Identities=18%  Similarity=0.127  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+++ +|.++++.+...|.+|+++++++++.+.+ +.    .+...   ..|..+.+..+.+.  ....+++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~g~~~---~~~~~~~~~~~~~~--~~~~~~~  202 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KE----LGADH---VIDYKEEDLEEELR--LTGGGGA  202 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HH----hCCce---eccCCcCCHHHHHH--HhcCCCC
Confidence            478899999988 99999998888999999998887654443 22    22221   12333333333333  2234679


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++++++.
T Consensus       203 d~vi~~~~~  211 (271)
T cd05188         203 DVVIDAVGG  211 (271)
T ss_pred             CEEEECCCC
Confidence            999999876

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.35  E-value=0.001  Score=51.09  Aligned_cols=75  Identities=16%  Similarity=0.176  Sum_probs=60.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      .-.+|.||+|..|.-+|++|+.+|.+..+.+|+..+++.+...|    +.+...+.+.+  ++.+++..+      +..+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L----G~~~~~~p~~~--p~~~~~~~~------~~~V   74 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL----GPEAAVFPLGV--PAALEAMAS------RTQV   74 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc----CccccccCCCC--HHHHHHHHh------cceE
Confidence            55899999999999999999999999889999999998887765    44555554444  666665555      5799


Q ss_pred             EEEcCCC
Q 031016           93 LVYNAYQ   99 (167)
Q Consensus        93 lv~~ag~   99 (167)
                      ++||+|.
T Consensus        75 VlncvGP   81 (382)
T COG3268          75 VLNCVGP   81 (382)
T ss_pred             EEecccc
Confidence            9999997

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.33  E-value=0.0081  Score=46.47  Aligned_cols=114  Identities=12%  Similarity=0.130  Sum_probs=73.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .++.+.|+|+ |.+|..++..++.+|.  .+++++++++.++....++....  ..++....   ++.+       .+  
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~-------~~--   71 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYS-------DC--   71 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHH-------Hh--
Confidence            3567999998 9999999999999886  69999998887776666665411  11222221   2211       11  


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                       ..-|++|.++|.    +..|  ..+.   .+.++.|..    +.+.+.+.+.+.. .+.++++|-
T Consensus        72 -~~adivIitag~----~~k~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         72 -KDADLVVITAGA----PQKP--GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             -CCCCEEEEecCC----CCCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccC
Confidence             357999999997    3333  2333   344666766    4455555555543 567777765

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.31  E-value=0.0014  Score=50.13  Aligned_cols=75  Identities=19%  Similarity=0.206  Sum_probs=50.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|+|+++++|.++++.+...|++|+.+.+++++.+.+    .. .+.+ ..+  |.   +++.+   .+.+...+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~-~~~~-~~~--~~---~~~~~---~~~~~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KE-LGAD-YVI--DG---SKFSE---DVKKLGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HH-cCCc-EEE--ec---HHHHH---HHHhccCC
Confidence            467899999999999999999999999999988877654443    21 2322 111  22   11222   22223478


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++++++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999998875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK14968 putative methyltransferase; Provisional

Probab=97.31  E-value=0.012  Score=41.47  Aligned_cols=120  Identities=16%  Similarity=0.055  Sum_probs=70.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCc---EEEEEeecCCHHHHHHHHHHHHhc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ---VFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .++.++-.|++.|.   ++..+++++.+|+.++.+++..+...+.+.. .+.+   +.++.+|+.+.         .. .
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~~~~~~~~~~~d~~~~---------~~-~   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKL-NNIRNNGVEVIRSDLFEP---------FR-G   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHH-cCCCCcceEEEecccccc---------cc-c
Confidence            56788888887665   4555555588999999998887777666654 2222   77777776432         11 1


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHH---HHHHHHHHHhhHhcCCceEEEec
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGA---FLCAQQVLSGMVERGKGTIIFTG  150 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~---~~l~~~~~~~~~~~~~g~iv~is  150 (167)
                      +++|.++.|...   .+..+.... .+.++..+..+..+.   -.+++.+.+.++.  .|.++++.
T Consensus        89 ~~~d~vi~n~p~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~--gG~~~~~~  148 (188)
T PRK14968         89 DKFDVILFNPPY---LPTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP--GGRILLLQ  148 (188)
T ss_pred             cCceEEEECCCc---CCCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC--CeEEEEEE
Confidence            368999998876   333222221 223333333333322   2345666666654  35665543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.31  E-value=0.0019  Score=50.49  Aligned_cols=43  Identities=9%  Similarity=0.037  Sum_probs=36.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      .+.+++|.|++|++|...++.....|++|+.+++++++.+.+.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~  200 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK  200 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            4789999999999999999888889999988888776654443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.31  E-value=0.0015  Score=48.02  Aligned_cols=75  Identities=25%  Similarity=0.393  Sum_probs=55.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++|.|+ |-+|..+|+.|.++|++|++++++++...+...     .....+.+.+|.++++-++++=     ....|.+
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~-----~~~~~~~v~gd~t~~~~L~~ag-----i~~aD~v   70 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA-----DELDTHVVIGDATDEDVLEEAG-----IDDADAV   70 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh-----hhcceEEEEecCCCHHHHHhcC-----CCcCCEE
Confidence            4667776 799999999999999999999999887665332     1135678889999988766541     1346777


Q ss_pred             EEcCCC
Q 031016           94 VYNAYQ   99 (167)
Q Consensus        94 v~~ag~   99 (167)
                      |..-|.
T Consensus        71 va~t~~   76 (225)
T COG0569          71 VAATGN   76 (225)
T ss_pred             EEeeCC
Confidence            666653

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.30  E-value=0.0026  Score=48.54  Aligned_cols=47  Identities=17%  Similarity=0.234  Sum_probs=37.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh---hhHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL---GRLSRFADEIA   57 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~   57 (167)
                      ..+|+++|.|+ ||-+++++..|+..|+ +|.+..|++   ++.+++.+.+.
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            46789999998 6779999999999997 799999985   36666666553

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.29  E-value=0.00099  Score=48.75  Aligned_cols=84  Identities=14%  Similarity=0.179  Sum_probs=60.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC---eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY---TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.++|||++|=+|.++.+.+.++|.   +.++.+..                      .+|+++..+.+++++..    +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------------d~DLt~~a~t~~lF~~e----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------------DADLTNLADTRALFESE----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------------cccccchHHHHHHHhcc----C
Confidence            6799999999999999999999986   34443331                      46999999999999875    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhh
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISS  124 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~  124 (167)
                      +..+|+.|+..++....  .....+-|...+++|-
T Consensus        56 PthVIhlAAmVGGlf~N--~~ynldF~r~Nl~ind   88 (315)
T KOG1431|consen   56 PTHVIHLAAMVGGLFHN--NTYNLDFIRKNLQIND   88 (315)
T ss_pred             CceeeehHhhhcchhhc--CCCchHHHhhcceech
Confidence            77888888762222111  2345566666666553

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.24  E-value=0.0033  Score=48.39  Aligned_cols=42  Identities=10%  Similarity=0.072  Sum_probs=35.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|+|++|++|..+++.....|++|+.+++++++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999988888899999888877665443

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.21  E-value=0.0022  Score=45.25  Aligned_cols=78  Identities=12%  Similarity=-0.030  Sum_probs=55.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ..+.++.++|.||+|-.|..+.+.+.+++-  +|+++.|.+....+        ....+.....|+...++.   ++.  
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------t~k~v~q~~vDf~Kl~~~---a~~--   80 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------TDKVVAQVEVDFSKLSQL---ATN--   80 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------ccceeeeEEechHHHHHH---Hhh--
Confidence            345678899999999999999999999873  79999886422111        233466666677544433   333  


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                       .+.+|+++++-|.
T Consensus        81 -~qg~dV~FcaLgT   93 (238)
T KOG4039|consen   81 -EQGPDVLFCALGT   93 (238)
T ss_pred             -hcCCceEEEeecc
Confidence             3579999999986

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.19  E-value=0.0019  Score=48.44  Aligned_cols=73  Identities=14%  Similarity=0.251  Sum_probs=52.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++|+|||+. |+.++++|.++|++|++..+++...+.+.+     .+  ...+..+..+.+++.+++.+    .++|.+
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----~g--~~~v~~g~l~~~~l~~~l~~----~~i~~V   69 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----HQ--ALTVHTGALDPQELREFLKR----HSIDIL   69 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----cC--CceEEECCCCHHHHHHHHHh----cCCCEE
Confidence            4899999987 999999999999999998887654332211     11  22344566677777666664    468888


Q ss_pred             EEcCC
Q 031016           94 VYNAY   98 (167)
Q Consensus        94 v~~ag   98 (167)
                      |..+.
T Consensus        70 IDAtH   74 (256)
T TIGR00715        70 VDATH   74 (256)
T ss_pred             EEcCC
Confidence            88775

This enzyme was found to be a monomer by gel filtration.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.19  E-value=0.003  Score=48.89  Aligned_cols=43  Identities=9%  Similarity=0.011  Sum_probs=36.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFAD   54 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   54 (167)
                      +.+++|+|++|++|...++.....|+ +|+.+++++++.+.+.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~  198 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS  198 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence            37999999999999999988888899 79999888776655544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.18  E-value=0.002  Score=51.65  Aligned_cols=46  Identities=11%  Similarity=0.203  Sum_probs=39.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEI   56 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   56 (167)
                      +.++.++|.|+ |++|+.+++.|.+.|+ ++++..|+.++.+++.+.+
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            56899999999 8999999999999996 7899999988877776654

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.15  E-value=0.0078  Score=43.52  Aligned_cols=80  Identities=20%  Similarity=0.233  Sum_probs=52.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC-------------------hhhHHHHHHHHHhhcCC--cEEEE
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD-------------------LGRLSRFADEIAREEKS--QVFAI   67 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~--~~~~~   67 (167)
                      +.+++++|.|+ ||+|..+++.|+..|. ++.+++++                   ..+.+.+.+.++. .+.  ++..+
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~v~i~~~   96 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRE-LNSDIQVTAL   96 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHH-hCCCCEEEEe
Confidence            46788999996 7999999999999997 78888776                   2344455556655 333  34444


Q ss_pred             EeecCCHHHHHHHHHHHHhcCCccEEEEcCC
Q 031016           68 RIDCSDSRSVREAFEGVLSLGFVEVLVYNAY   98 (167)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~i~~lv~~ag   98 (167)
                      ..++. ++.+.+++      ...|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~------~~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVT-AENLELLI------NNVDLVLDCTD  120 (202)
T ss_pred             hhcCC-HHHHHHHH------hCCCEEEECCC
Confidence            43443 23333333      35688877764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.14  E-value=0.0037  Score=47.36  Aligned_cols=80  Identities=9%  Similarity=0.022  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+.    . .+.+.   .+|..+.+..+.+.. ......+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~-~g~~~---~~~~~~~~~~~~~~~-~~~~~~~  214 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR----Q-AGADA---VFNYRAEDLADRILA-ATAGQGV  214 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-cCCCE---EEeCCCcCHHHHHHH-HcCCCce
Confidence            4789999999999999999999999999999988876654442    1 23221   234444444444322 2222368


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.+++++|.
T Consensus       215 d~vi~~~~~  223 (325)
T cd08253         215 DVIIEVLAN  223 (325)
T ss_pred             EEEEECCch
Confidence            999988764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.11  E-value=0.0072  Score=47.21  Aligned_cols=35  Identities=29%  Similarity=0.362  Sum_probs=30.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            46788999998 7899999999999997 78888875

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.11  E-value=0.0084  Score=45.32  Aligned_cols=80  Identities=14%  Similarity=0.057  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+++++|..+++.+...|++|++++++.+..+.+ +.    .+.+   ...|..+.+..+++ ......+++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~----~g~~---~~~~~~~~~~~~~~-~~~~~~~~~  209 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RA----LGAD---VAINYRTEDFAEEV-KEATGGRGV  209 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH----cCCC---EEEeCCchhHHHHH-HHHhCCCCe
Confidence            478999999999999999999999999999988877655443 22    2222   12343333333332 222222468


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++++.|.
T Consensus       210 d~vi~~~g~  218 (323)
T cd05276         210 DVILDMVGG  218 (323)
T ss_pred             EEEEECCch
Confidence            999988764

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.09  E-value=0.0045  Score=47.44  Aligned_cols=42  Identities=12%  Similarity=0.135  Sum_probs=35.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|+|++|++|..+++.....|++|+.+++++++.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999988888999999888877655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.09  E-value=0.015  Score=46.93  Aligned_cols=113  Identities=12%  Similarity=0.003  Sum_probs=73.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHc-------CC--eEEEEecChhhHHHHHHHHHhhc---CCcEEEEEeecCCHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHE-------GY--TVAILARDLGRLSRFADEIAREE---KSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~-------g~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~   80 (167)
                      -.+.|+|++|.+|.+++..|+.+       +.  ++++++++++.++...-++....   ..++.+.   ..+.+.    
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~---~~~ye~----  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG---IDPYEV----  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe---cCCHHH----
Confidence            45899999999999999999987       64  68999999888776555554311   1121111   122222    


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh--cCCceEEEecC
Q 031016           81 FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE--RGKGTIIFTGC  151 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~iv~iss  151 (167)
                            +..-|++|.++|.    +..+  ..+   -.+.++.|..    +++...+.+.+  ...+.||++|-
T Consensus       174 ------~kdaDiVVitAG~----prkp--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        174 ------FQDAEWALLIGAK----PRGP--GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ------hCcCCEEEECCCC----CCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence                  2357999999997    3333  223   3445777766    55666666666  34678887774

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.05  E-value=0.0084  Score=46.53  Aligned_cols=113  Identities=10%  Similarity=0.062  Sum_probs=68.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecChhh--HHHHHHHHHhhc---CCcEEEEEeecCCHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDLGR--LSRFADEIAREE---KSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~~~--~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~   80 (167)
                      +.+.|+|++|.+|..++..|+.+|.       .+++++.+++.  ++...-.+....   ..++.   ..-.+.      
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~---i~~~~~------   73 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV---ITDDPN------   73 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE---EecCcH------
Confidence            4689999999999999999998874       58899885432  333333332200   01111   111111      


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecC
Q 031016           81 FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGC  151 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss  151 (167)
                       +.   ...-|++|.+||.    +..+  ..+..   +.+..|+.    +++.+.+.+.+..  .+.++++|-
T Consensus        74 -~~---~~daDivvitaG~----~~k~--g~tR~---dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (322)
T cd01338          74 -VA---FKDADWALLVGAK----PRGP--GMERA---DLLKANGK----IFTAQGKALNDVASRDVKVLVVGN  129 (322)
T ss_pred             -HH---hCCCCEEEEeCCC----CCCC--CCcHH---HHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecC
Confidence             11   2357999999997    3333  23333   34667766    5566666666654  567777764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.05  E-value=0.0042  Score=46.69  Aligned_cols=115  Identities=17%  Similarity=0.204  Sum_probs=68.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC----CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEG----YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.|+|++|.+|..++..|+..|    .+|++++.++++++.....++...... ....+-.++  +..+.+      ..-
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~--d~~~~~------~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITD--DPYEAF------KDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECC--chHHHh------CCC
Confidence            3689998899999999999988    689999998887777666665421111 011111222  222222      357


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      |++|.++|.    +..+  ..+.   ...+..|+.    +.+.+.+.+.+.. .+.++++|-
T Consensus        72 DiVv~t~~~----~~~~--g~~r---~~~~~~n~~----i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          72 DVVIITAGV----GRKP--GMGR---LDLLKRNVP----IVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             CEEEECCCC----CCCc--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence            999999987    2222  1221   223334444    4455555555443 467777764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.04  E-value=0.0045  Score=40.31  Aligned_cols=71  Identities=25%  Similarity=0.374  Sum_probs=51.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.+     .+  +.++.+|.++++.++++=     ..+.+.+|
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-----~~--~~~i~gd~~~~~~l~~a~-----i~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-----EG--VEVIYGDATDPEVLERAG-----IEKADAVV   67 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-----TT--SEEEES-TTSHHHHHHTT-----GGCESEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-----cc--cccccccchhhhHHhhcC-----ccccCEEE
Confidence            467777 589999999999977799999999887655543     22  678889999998776531     13567777


Q ss_pred             EcCC
Q 031016           95 YNAY   98 (167)
Q Consensus        95 ~~ag   98 (167)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            6664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.04  E-value=0.016  Score=39.01  Aligned_cols=79  Identities=15%  Similarity=0.274  Sum_probs=55.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC-------------------hhhHHHHHHHHHhh-cCCcEEEEEee
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD-------------------LGRLSRFADEIARE-EKSQVFAIRID   70 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~-~~~~~~~~~~D   70 (167)
                      .++++|.|+ |++|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+... +..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467889988 7999999999999998 78888763                   13455666666653 24467777777


Q ss_pred             cCCHHHHHHHHHHHHhcCCccEEEEcCC
Q 031016           71 CSDSRSVREAFEGVLSLGFVEVLVYNAY   98 (167)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~i~~lv~~ag   98 (167)
                      + +++...++++      ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH------TSSEEEEESS
T ss_pred             c-cccccccccc------CCCEEEEecC
Confidence            7 3445555554      4688888764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.04  E-value=0.0091  Score=46.04  Aligned_cols=116  Identities=14%  Similarity=0.130  Sum_probs=67.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEecCh--hhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILARDL--GRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~--~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .+.|+|++|.+|..++..|+.+|.  +|+++++++  +.++.....+...   .+...   .+..++.  .+. +     
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d--~~~-l-----   70 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD--LSD-V-----   70 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC--HHH-h-----
Confidence            478999999999999999999986  499999854  3333222222210   11111   1222211  111 2     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       ..-|++|.++|.    +..+  ..+.   .+.++.|+.-...+.+.+.+..   ..+.+|++++..
T Consensus        71 -~~aDiViitag~----p~~~--~~~r---~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~npv  124 (309)
T cd05294          71 -AGSDIVIITAGV----PRKE--GMSR---LDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTNPV  124 (309)
T ss_pred             -CCCCEEEEecCC----CCCC--CCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCch
Confidence             357999999997    2222  2232   3445666665555555444332   347888888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.04  E-value=0.0082  Score=47.88  Aligned_cols=47  Identities=21%  Similarity=0.415  Sum_probs=41.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIA   57 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~   57 (167)
                      +++++++|.|+ |-+|...++.|.++|. +|++..|..++..++++.+.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            57899999999 6899999999999995 78888999998888877764

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.99  E-value=0.008  Score=48.30  Aligned_cols=45  Identities=22%  Similarity=0.342  Sum_probs=38.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADE   55 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~   55 (167)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.++..++.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            46789999998 999999999999999 5899999988776655544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.99  E-value=0.007  Score=46.90  Aligned_cols=120  Identities=14%  Similarity=0.122  Sum_probs=69.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.+.+.|+|+ |.+|..++..++..| +.+++++.+++.++...-.+.. . .........+....+.+ .+      ..
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~-~-~~~~~~~~~i~~~~d~~-~l------~~   73 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKH-F-STLVGSNINILGTNNYE-DI------KD   73 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhh-h-ccccCCCeEEEeCCCHH-Hh------CC
Confidence            4567899997 899999999999988 6899999887654422222222 1 11110001111111122 12      24


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      -|++|.++|.    +..+  ..+   -.+.+..|.    .+.+.+.+.+.+.. .+.++++|-..
T Consensus        74 ADiVVitag~----~~~~--g~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         74 SDVVVITAGV----QRKE--EMT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             CCEEEECCCC----CCCC--CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence            6999999987    2222  222   244566666    35666666666554 45677776543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.96  E-value=0.0078  Score=42.58  Aligned_cols=42  Identities=21%  Similarity=0.251  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      ..+.++++.|.|. |.||+++++++...|++|+..+|......
T Consensus        32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            4568999999988 89999999999999999999999876433

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN02602 lactate dehydrogenase

Probab=96.95  E-value=0.048  Score=42.86  Aligned_cols=113  Identities=12%  Similarity=0.134  Sum_probs=69.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.+.|+|+ |.+|..++..++.++.  .+++++.+++.++....++....  .... .+.. -++.+       .+   .
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy~-------~~---~  104 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDYA-------VT---A  104 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCHH-------Hh---C
Confidence            57899997 8999999999998874  69999998876665555554311  1111 1111 12222       12   3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      .-|++|.+||.    +..+  ..+.   .+.+..|+.    +.+.+.+.+.+.. .+.++++|-
T Consensus       105 daDiVVitAG~----~~k~--g~tR---~dll~~N~~----I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        105 GSDLCIVTAGA----RQIP--GESR---LNLLQRNVA----LFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCCEEEECCCC----CCCc--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence            57999999997    2232  2333   344555655    5555666565543 577777774

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.93  E-value=0.023  Score=46.70  Aligned_cols=81  Identities=9%  Similarity=0.089  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-------------HHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-------------RSV   77 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-------------~~~   77 (167)
                      .+.+++|+|+ |.+|+..+..+...|++|+++++++++++...+     .+.+...+  |..+.             +..
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-----lGA~~v~i--~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-----MGAEFLEL--DFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----cCCeEEEe--ccccccccccchhhhcchhHH
Confidence            5788999999 799999999999999999999998887664432     45443222  32221             111


Q ss_pred             HHHHHHHH-hcCCccEEEEcCCC
Q 031016           78 REAFEGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        78 ~~~~~~~~-~~~~i~~lv~~ag~   99 (167)
                      ++..+.+. ..+..|++|.++|.
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~  258 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALI  258 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCC
Confidence            22222212 23579999999997

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.92  E-value=0.0086  Score=46.58  Aligned_cols=43  Identities=23%  Similarity=0.252  Sum_probs=37.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD   54 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   54 (167)
                      .+++++|+|++ |+|-..++.....|++|++++|++++++...+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~  208 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK  208 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH
Confidence            48999999998 99998888888899999999999988765544

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.89  E-value=0.013  Score=46.43  Aligned_cols=35  Identities=26%  Similarity=0.363  Sum_probs=30.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35677888877 7999999999999998 78888876

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.89  E-value=0.008  Score=47.13  Aligned_cols=79  Identities=14%  Similarity=0.059  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +++.+||.||+||+|.+.++-....|+..+++.++.+.. ++++.    .+.+ .  -.|-.+++-+++..+..  ..++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~----lGAd-~--vvdy~~~~~~e~~kk~~--~~~~  226 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKK----LGAD-E--VVDYKDENVVELIKKYT--GKGV  226 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHH----cCCc-E--eecCCCHHHHHHHHhhc--CCCc
Confidence            588999999999999999999989995555555544443 23333    3432 2  23666644443333322  5689


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++-+.|.
T Consensus       227 DvVlD~vg~  235 (347)
T KOG1198|consen  227 DVVLDCVGG  235 (347)
T ss_pred             cEEEECCCC
Confidence            999999987

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.88  E-value=0.02  Score=42.17  Aligned_cols=79  Identities=14%  Similarity=0.169  Sum_probs=50.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC-------------------hhhHHHHHHHHHhhcCC--cEEEE
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD-------------------LGRLSRFADEIAREEKS--QVFAI   67 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~--~~~~~   67 (167)
                      +.+++++|.|+ ||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.++. .+.  ++..+
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~~~i~~~   96 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRA-INPDVEIEAY   96 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHH-hCCCCEEEEe
Confidence            45788999997 7999999999999997 67777553                   1344555666655 333  45555


Q ss_pred             EeecCCHHHHHHHHHHHHhcCCccEEEEcC
Q 031016           68 RIDCSDSRSVREAFEGVLSLGFVEVLVYNA   97 (167)
Q Consensus        68 ~~D~~~~~~~~~~~~~~~~~~~i~~lv~~a   97 (167)
                      ..+++ ++.+.+++.      ..|++|.+.
T Consensus        97 ~~~i~-~~~~~~~~~------~~DvVi~~~  119 (228)
T cd00757          97 NERLD-AENAEELIA------GYDLVLDCT  119 (228)
T ss_pred             cceeC-HHHHHHHHh------CCCEEEEcC
Confidence            55553 233333332      356665554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.87  E-value=0.0072  Score=48.78  Aligned_cols=59  Identities=27%  Similarity=0.381  Sum_probs=43.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   79 (167)
                      .++|.|+ |.+|..+++.|.++|++|++++++++..+++.+.      ..+.++.+|.++++.+++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~------~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR------LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh------cCEEEEEeCCCCHHHHHH
Confidence            4788887 8999999999999999999999988876654431      134555667766554443

>PRK04148 hypothetical protein; Provisional

Probab=96.85  E-value=0.0054  Score=41.35  Aligned_cols=56  Identities=14%  Similarity=0.186  Sum_probs=43.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      +++.+++.|.+  .|.+++..|.+.|++|++++.++...++..+.       .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC
Confidence            35679999996  88889999999999999999998865554332       2567778888654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.84  E-value=0.024  Score=42.30  Aligned_cols=35  Identities=23%  Similarity=0.327  Sum_probs=30.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            46788999999 8999999999999997 78887664

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.83  E-value=0.02  Score=39.90  Aligned_cols=85  Identities=21%  Similarity=0.329  Sum_probs=54.8

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh------cCCcEEEEEeecCCHHHHHHHHHH--H
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE------EKSQVFAIRIDCSDSRSVREAFEG--V   84 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~~~~~--~   84 (167)
                      +++-+.|. |.+|..+++.|+++|++|.+.+|++++.+++.+.-...      .-.+...+..=+.+.+.+++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45777887 79999999999999999999999988777665321000      001224445567778888888887  6


Q ss_pred             H-hcCCccEEEEcCC
Q 031016           85 L-SLGFVEVLVYNAY   98 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag   98 (167)
                      . ...+=.++|.+.-
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            5 4445556665553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.83  E-value=0.0079  Score=48.40  Aligned_cols=45  Identities=22%  Similarity=0.453  Sum_probs=38.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADE   55 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~   55 (167)
                      ..+++++|.|+ |.+|..+++.|...|+ +|++.+|++++..++.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            46889999988 8999999999999997 788999998777666554

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.83  E-value=0.0036  Score=51.09  Aligned_cols=46  Identities=24%  Similarity=0.302  Sum_probs=39.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      .+.+++++|+|+ ||+|+++++.|.+.|++|++.+|+.++.+++.+.
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            346889999997 7999999999999999999999988777666554

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.82  E-value=0.013  Score=45.52  Aligned_cols=76  Identities=13%  Similarity=0.083  Sum_probs=48.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++++.+. +    .+.+..   .|..+. ++.++..   ..+.
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~----lGa~~v---i~~~~~-~~~~~~~---~~g~  235 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-E----MGADKL---VNPQND-DLDHYKA---EKGY  235 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-H----cCCcEE---ecCCcc-cHHHHhc---cCCC
Confidence            4789999986 8999999988888898 5888888877665332 2    343321   233332 2222111   2245


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus       236 ~D~vid~~G~  245 (343)
T PRK09880        236 FDVSFEVSGH  245 (343)
T ss_pred             CCEEEECCCC
Confidence            7888888774

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.78  E-value=0.0099  Score=45.86  Aligned_cols=72  Identities=18%  Similarity=0.273  Sum_probs=50.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+++++|.|+ |.+|..+++.|.+.|. +|++++|++++..++.+.+    +..  ..  +   .++..+.+      .
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~----g~~--~~--~---~~~~~~~l------~  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL----GGN--AV--P---LDELLELL------N  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----CCe--EE--e---HHHHHHHH------h
Confidence            46889999998 9999999999998775 7888999988777666553    221  11  1   22333322      2


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++|.+.+.
T Consensus       238 ~aDvVi~at~~  248 (311)
T cd05213         238 EADVVISATGA  248 (311)
T ss_pred             cCCEEEECCCC
Confidence            46888888875

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.75  E-value=0.028  Score=41.78  Aligned_cols=35  Identities=26%  Similarity=0.337  Sum_probs=29.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45778999988 7999999999999997 78887764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.75  E-value=0.0059  Score=42.91  Aligned_cols=42  Identities=17%  Similarity=0.215  Sum_probs=35.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      .+.+|.++|+|++.-+|..+++.|.++|++|.++.|+.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~   82 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK   82 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence            468999999999656799999999999999999998764443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.73  E-value=0.096  Score=40.51  Aligned_cols=115  Identities=11%  Similarity=0.074  Sum_probs=70.6

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+.|+|+ |.+|..++..|+.+|.  .+++++.+++.++....++....  ........  .+|.+.    +      .
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~----~------~   70 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV----T------A   70 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH----h------C
Confidence            45889996 9999999999998874  68999988776665555554311  01111111  122221    1      3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      .-|++|.++|.   . ..+  ..+.   .+.++.|..    +.+.+.+.+.+.. .+.++++|..+
T Consensus        71 ~adivvitaG~---~-~k~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          71 NSKVVIVTAGA---R-QNE--GESR---LDLVQRNVD----IFKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             CCCEEEECCCC---C-CCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEccChH
Confidence            57999999997   2 222  2343   334666655    4565666565554 57888877533

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.71  E-value=0.013  Score=44.46  Aligned_cols=79  Identities=13%  Similarity=0.035  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+++++|..+.+.+...|++|+++.++++..+.+ +.    .+.+..   .+....+..+. +.......++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~g~~~~---~~~~~~~~~~~-~~~~~~~~~~  209 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA----LGADIA---INYREEDFVEV-VKAETGGKGV  209 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cCCcEE---EecCchhHHHH-HHHHcCCCCe
Confidence            478999999999999999999999999999988877655432 22    332211   23233332222 2222212358


Q ss_pred             cEEEEcCC
Q 031016           91 EVLVYNAY   98 (167)
Q Consensus        91 ~~lv~~ag   98 (167)
                      |.+++++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            88888865

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.69  E-value=0.0033  Score=37.85  Aligned_cols=33  Identities=18%  Similarity=0.270  Sum_probs=22.0

Q ss_pred             CcEEEEEcCCCchhHH--HHHHHHHcCCeEEEEecC
Q 031016           12 RGIAAIVGVGPNLGRS--IARKFAHEGYTVAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~--~a~~l~~~g~~v~~~~r~   45 (167)
                      .|.+||+|+++|.|++  ++..+ ..|++.+.++..
T Consensus        39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            4899999999999999  55555 557787777654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.68  E-value=0.16  Score=39.21  Aligned_cols=112  Identities=10%  Similarity=0.094  Sum_probs=70.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cC-CcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EK-SQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.|.|+ |.+|..+|..|+.++.  .+++++.+++.++.....|...   .+ .++....   .+.       +.+   .
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y-------~~~---~   67 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDY-------DDC---A   67 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCH-------HHh---C
Confidence            578898 8999999999998875  6999998877665544445431   11 1333332   232       222   3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      .-|++|.+||.    +..|-  .+.+ -.+.++.|..    +++.+.+.+.+.. .+.++++|-
T Consensus        68 ~aDivvitaG~----~~kpg--~tr~-R~dll~~N~~----I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          68 DADIIVITAGP----SIDPG--NTDD-RLDLAQTNAK----IIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             CCCEEEECCCC----CCCCC--CCch-HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            57999999997    33332  2211 2344666665    6677777777765 466666654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.67  E-value=0.027  Score=37.40  Aligned_cols=76  Identities=22%  Similarity=0.323  Sum_probs=52.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHH-cCCeEEEE-ecCh----------------------hhHHHHHHHHHhhcCCcEEEEEe
Q 031016           14 IAAIVGVGPNLGRSIARKFAH-EGYTVAIL-ARDL----------------------GRLSRFADEIAREEKSQVFAIRI   69 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~-~g~~v~~~-~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~~   69 (167)
                      .+.|.|++|.+|+.+++.+.+ .+.+++.. +|++                      ..+++..+.      .+   +.+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~------~D---VvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE------AD---VVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-------S---EEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc------CC---EEE
Confidence            378999999999999999999 57786554 6655                      122222221      12   567


Q ss_pred             ecCCHHHHHHHHHHHHhcCCccEEEEcCCC
Q 031016           70 DCSDSRSVREAFEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        70 D~~~~~~~~~~~~~~~~~~~i~~lv~~ag~   99 (167)
                      |+|.++.+...++.+.+. ++..++-+.|.
T Consensus        73 DfT~p~~~~~~~~~~~~~-g~~~ViGTTG~  101 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKH-GVPLVIGTTGF  101 (124)
T ss_dssp             EES-HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred             EcCChHHhHHHHHHHHhC-CCCEEEECCCC
Confidence            999999999888888733 67888888876

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.66  E-value=0.017  Score=44.27  Aligned_cols=42  Identities=10%  Similarity=0.029  Sum_probs=36.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~  186 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL  186 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            468999999999999999999999999999988877665544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.66  E-value=0.011  Score=47.82  Aligned_cols=62  Identities=27%  Similarity=0.413  Sum_probs=47.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   78 (167)
                      ..+.++|.|+ |.+|+.+++.|.++|++|++++++++..+++.+.     ...+..+..|.++++.++
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~L~  291 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE-----LPNTLVLHGDGTDQELLE  291 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----CCCCeEEECCCCCHHHHH
Confidence            4678999999 8999999999999999999999998776655442     123455666777665543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.65  E-value=0.028  Score=43.94  Aligned_cols=35  Identities=29%  Similarity=0.391  Sum_probs=31.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +..+.++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            46788999999 7999999999999998 89998875

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.63  E-value=0.029  Score=42.57  Aligned_cols=42  Identities=14%  Similarity=0.108  Sum_probs=36.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+++++|+|+++++|.++++.+...|++++.++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            467899999999999999999999999999998877655444

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.62  E-value=0.024  Score=43.81  Aligned_cols=115  Identities=10%  Similarity=0.172  Sum_probs=67.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      +.|+|++|.+|..++..|+.++.  .+++++.++.  +...-.+.. .........+.  +.++..   +.   ...-|+
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a~DL~~-~~~~~~i~~~~--~~~~~~---~~---~~daDi   70 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVAADLSH-IPTAASVKGFS--GEEGLE---NA---LKGADV   70 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEEchhhc-CCcCceEEEec--CCCchH---HH---cCCCCE
Confidence            68999999999999999998875  6889988762  111112222 11111111101  111111   11   246799


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      +|.++|.    +..+  ..+   -.+.++.|+.    +++.+.+.+.+.. .+.++++|-.+
T Consensus        71 vvitaG~----~~~~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        71 VVIPAGV----PRKP--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             EEEeCCC----CCCC--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            9999997    2333  222   3445777777    5666666666554 56777776544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.62  E-value=0.028  Score=43.77  Aligned_cols=41  Identities=15%  Similarity=0.250  Sum_probs=35.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+++++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999998888999999888887765543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.61  E-value=0.0081  Score=42.65  Aligned_cols=43  Identities=35%  Similarity=0.571  Sum_probs=34.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA   57 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   57 (167)
                      ++.|.|+ |.+|..++..++..|++|.+.+++++.+++..+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            3678888 899999999999999999999999887665554443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.59  E-value=0.03  Score=54.14  Aligned_cols=139  Identities=12%  Similarity=0.121  Sum_probs=86.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .++.++|+..+++++.+++++|.++|+.|+++......    ....+. .+..+..+.+.-.+..+++.++..+. ..++
T Consensus      1754 ~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1828 (2582)
T TIGR02813      1754 SGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV----SHSASP-LASAIASVTLGTIDDTSIEAVIKDIEEKTAQ 1828 (2582)
T ss_pred             cCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc----cccccc-cccccccccccccchHHHHHHHHhhhccccc
Confidence            46778888889999999999999999998776422110    011111 22233334445556677888888877 6788


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      ++.+||....   .. ......+.......-..-+...|.+.|.+.+.+...+.+.++.+|...|-.|.
T Consensus      1829 ~~g~i~l~~~---~~-~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~ 1893 (2582)
T TIGR02813      1829 IDGFIHLQPQ---HK-SVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGY 1893 (2582)
T ss_pred             cceEEEeccc---cc-cccccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCcccc
Confidence            9999998765   21 10111110011111123455578888887776665556789999988776665

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.59  E-value=0.058  Score=42.92  Aligned_cols=113  Identities=11%  Similarity=0.022  Sum_probs=68.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-e----EEE--E--ecChhhHHHHHHHHHhhc---CCcEEEEEeecCCHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-T----VAI--L--ARDLGRLSRFADEIAREE---KSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~----v~~--~--~r~~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~   80 (167)
                      -.+.|+|++|.+|..++..++.++. +    |.+  +  +++.+.++...-++....   ..++.+.   -.+.+     
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~---~~~y~-----  116 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG---IDPYE-----  116 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe---cCCHH-----
Confidence            4589999999999999999998874 4    333  3  777777665555554311   1111111   11211     


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh-c-CCceEEEecC
Q 031016           81 FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE-R-GKGTIIFTGC  151 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~g~iv~iss  151 (167)
                        .   +..-|++|.+||.    +..+  ..+   -.+.++.|..    +++.+.+.+.+ . +.+.||++|-
T Consensus       117 --~---~kdaDIVVitAG~----prkp--g~t---R~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       117 --V---FEDADWALLIGAK----PRGP--GME---RADLLDINGQ----IFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             --H---hCCCCEEEECCCC----CCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCC
Confidence              1   1357999999997    3333  223   3445666766    55666666665 3 3567777774

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.57  E-value=0.037  Score=40.36  Aligned_cols=35  Identities=26%  Similarity=0.383  Sum_probs=30.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +..+.++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35678999997 7999999999999998 68888776

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.55  E-value=0.0089  Score=43.70  Aligned_cols=41  Identities=27%  Similarity=0.425  Sum_probs=35.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      +.|+|++|.+|.++++.|++.|++|.+.+|++++.+++.+.
T Consensus         3 I~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         3 IAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            78999889999999999999999999999988777665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.54  E-value=0.027  Score=44.99  Aligned_cols=44  Identities=20%  Similarity=0.158  Sum_probs=34.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC---eEEEEecChhhHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY---TVAILARDLGRLSRFAD   54 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~   54 (167)
                      .+.+++|.|++|++|...++.+...|+   +|+++++++++++...+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            467899999999999999887776654   79888888877665443

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PLN00203 glutamyl-tRNA reductase

Probab=96.53  E-value=0.024  Score=46.83  Aligned_cols=75  Identities=9%  Similarity=0.255  Sum_probs=53.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.++.++|.|+ |.+|..+++.|...|+ +|++..|+.++.+.+.+.+.   +..+.+.  +   .++....+      .
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~~~--~---~~dl~~al------~  328 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEIIYK--P---LDEMLACA------A  328 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceEee--c---HhhHHHHH------h
Confidence            56899999999 9999999999999997 69999999888877765541   2222211  2   22333333      3


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++|.+.+.
T Consensus       329 ~aDVVIsAT~s  339 (519)
T PLN00203        329 EADVVFTSTSS  339 (519)
T ss_pred             cCCEEEEccCC
Confidence            56999888765

>PLN02740 Alcohol dehydrogenase-like

Probab=96.51  E-value=0.032  Score=44.06  Aligned_cols=79  Identities=18%  Similarity=0.152  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   88 (167)
                      .+++++|.|+ |++|...++.+...|+ +|+++++++++++.+.+     .+.+. ++  |..+. +.+.+.+.++.. +
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-----~Ga~~-~i--~~~~~~~~~~~~v~~~~~-~  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-----MGITD-FI--NPKDSDKPVHERIREMTG-G  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-----cCCcE-EE--ecccccchHHHHHHHHhC-C
Confidence            4789999986 8999999998888999 68888888776554422     33322 22  33322 123333333321 2


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|+++.++|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            57888888774

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.51  E-value=0.022  Score=43.54  Aligned_cols=41  Identities=17%  Similarity=0.246  Sum_probs=35.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      +++++|.|+++++|..+++.....|++|+.+++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            57899999999999999999989999999988887665444

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.51  E-value=0.015  Score=38.85  Aligned_cols=86  Identities=21%  Similarity=0.190  Sum_probs=52.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhh-------cCCcEEEEEeecCCHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIARE-------EKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      .-.+-|.|+ |.+|.++++.|.+.|+.|..+ +|+.+..+++.+.+...       .-.+...+.+-+.|. .+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            445888888 899999999999999998777 56665555554443211       012233344455554 67888888


Q ss_pred             HH-h--cCCccEEEEcCCC
Q 031016           84 VL-S--LGFVEVLVYNAYQ   99 (167)
Q Consensus        84 ~~-~--~~~i~~lv~~ag~   99 (167)
                      +. .  +.+=.++||+.|-
T Consensus        88 La~~~~~~~g~iVvHtSGa  106 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGA  106 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS
T ss_pred             HHHhccCCCCcEEEECCCC
Confidence            76 3  3344699999997

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.49  E-value=0.051  Score=38.36  Aligned_cols=31  Identities=29%  Similarity=0.474  Sum_probs=27.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~   46 (167)
                      ++|.|+ ||+|..+++.|+..|. ++.+++++.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            678887 8999999999999998 699988764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.49  E-value=0.019  Score=44.34  Aligned_cols=78  Identities=17%  Similarity=0.087  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|+|+ |++|...++.+...|++ |+++++++++.+.+ +.    .+.+. +  .|..+++ .+++ .+.....+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~----~ga~~-~--i~~~~~~-~~~~-~~~~~~~~  231 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KA----LGADF-V--INSGQDD-VQEI-RELTSGAG  231 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH----hCCCE-E--EcCCcch-HHHH-HHHhCCCC
Confidence            4789999986 89999999988889998 98888877765443 22    33321 1  2333332 3222 22211235


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.+.|.
T Consensus       232 ~d~vid~~g~  241 (339)
T cd08239         232 ADVAIECSGN  241 (339)
T ss_pred             CCEEEECCCC
Confidence            7888877764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK08223 hypothetical protein; Validated

Probab=96.47  E-value=0.03  Score=42.69  Aligned_cols=35  Identities=23%  Similarity=0.200  Sum_probs=30.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.+..++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            35778999998 6999999999999997 78888775

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=96.47  E-value=0.03  Score=40.78  Aligned_cols=83  Identities=14%  Similarity=0.135  Sum_probs=54.1

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHH-----hh----cCCcEEEEEeec
Q 031016            2 RNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIA-----RE----EKSQVFAIRIDC   71 (167)
Q Consensus         2 ~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~-----~~----~~~~~~~~~~D~   71 (167)
                      .++.-..++.+|.++|+|+ |..|..=++.|++.|++|++++... +.+..+.+.-.     ..    .-....++....
T Consensus         2 ~~lPl~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt   80 (210)
T COG1648           2 NYLPLFLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAAT   80 (210)
T ss_pred             CccceEEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeC
Confidence            3344344678999999999 6899999999999999998886554 44444433222     00    111245555566


Q ss_pred             CCHHHHHHHHHHHH
Q 031016           72 SDSRSVREAFEGVL   85 (167)
Q Consensus        72 ~~~~~~~~~~~~~~   85 (167)
                      .|++--+++...+.
T Consensus        81 ~d~~ln~~i~~~a~   94 (210)
T COG1648          81 DDEELNERIAKAAR   94 (210)
T ss_pred             CCHHHHHHHHHHHH
Confidence            67666666666664

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.46  E-value=0.1  Score=40.40  Aligned_cols=83  Identities=13%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH---------HHHHHHHHhhcCCcEEEEEeecCCHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL---------SRFADEIAREEKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~---------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   79 (167)
                      .+.+|++.|.|- |.||+.+++.|...|++|+..++.....         .++.+.+   ...++..+.+..++.  .+.
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l---~~aDvvv~~lPlt~~--T~~  206 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFL---SQTRVLINLLPNTPE--TVG  206 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHH---hcCCEEEECCCCCHH--HHH
Confidence            467899999988 7999999999999999999988754321         1122222   345777777776643  444


Q ss_pred             HHHH-HH-hcCCccEEEEcCC
Q 031016           80 AFEG-VL-SLGFVEVLVYNAY   98 (167)
Q Consensus        80 ~~~~-~~-~~~~i~~lv~~ag   98 (167)
                      ++.+ .. ... .+.++.|.|
T Consensus       207 li~~~~l~~mk-~ga~lIN~a  226 (312)
T PRK15469        207 IINQQLLEQLP-DGAYLLNLA  226 (312)
T ss_pred             HhHHHHHhcCC-CCcEEEECC
Confidence            5543 22 333 344444444

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.46  E-value=0.04  Score=43.34  Aligned_cols=79  Identities=10%  Similarity=0.110  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++++.+. .    .+.+..   .|..+ .+.+.+.+.++.. +
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~----~Ga~~~---i~~~~~~~~~~~~v~~~~~-~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-K----LGATDC---VNPNDYDKPIQEVIVEITD-G  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----hCCCeE---EcccccchhHHHHHHHHhC-C
Confidence            4789999986 8999999998888898 7988888877655442 2    333221   13322 1223333333321 3


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|+++.++|.
T Consensus       255 g~d~vid~~G~  265 (368)
T TIGR02818       255 GVDYSFECIGN  265 (368)
T ss_pred             CCCEEEECCCC
Confidence            58888888763

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.46  E-value=0.065  Score=41.67  Aligned_cols=115  Identities=10%  Similarity=0.061  Sum_probs=67.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+.|+|++|.+|..++..|+.++.       .+++++.++  +.++.....+.........  ...++. +.    .+. 
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~--~~~i~~-~~----~~~-   76 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA--GVVATT-DP----EEA-   76 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC--CcEEec-Ch----HHH-
Confidence            488999999999999999998874       688998864  3344444444331100000  001110 11    111 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecC
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGC  151 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss  151 (167)
                        ...-|++|.+||.    +..+  ..+   -.+.++.|+.    +.+.+.+.+.+..  .+.++++|-
T Consensus        77 --~~daDvVVitAG~----~~k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        77 --FKDVDAALLVGAF----PRKP--GME---RADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             --hCCCCEEEEeCCC----CCCC--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence              2357999999997    3333  233   3445777776    4455555555542  467777763

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.45  E-value=0.024  Score=46.17  Aligned_cols=77  Identities=19%  Similarity=0.200  Sum_probs=53.0

Q ss_pred             CCCCcEEEEEcCC----------------CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC
Q 031016            9 SSCRGIAAIVGVG----------------PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS   72 (167)
Q Consensus         9 ~~~~~~~lItGa~----------------~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~   72 (167)
                      ++.||.+|||+|.                |-.|.++|+.+..+|++|.+++-+...        .  .+..+..+.  +.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~--------~--~p~~v~~i~--V~  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL--------A--DPQGVKVIH--VE  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC--------C--CCCCceEEE--ec
Confidence            4689999999984                689999999999999999998754320        0  223355543  43


Q ss_pred             CHHHHHHHHHHHHhcCCccEEEEcCCCC
Q 031016           73 DSRSVREAFEGVLSLGFVEVLVYNAYQP  100 (167)
Q Consensus        73 ~~~~~~~~~~~~~~~~~i~~lv~~ag~~  100 (167)
                      +.++..+.+.+.  . +.|++|.+|++.
T Consensus       321 ta~eM~~av~~~--~-~~Di~I~aAAVa  345 (475)
T PRK13982        321 SARQMLAAVEAA--L-PADIAIFAAAVA  345 (475)
T ss_pred             CHHHHHHHHHhh--C-CCCEEEEecccc
Confidence            444444444332  3 379999999973

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.44  E-value=0.0099  Score=45.38  Aligned_cols=42  Identities=29%  Similarity=0.358  Sum_probs=36.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      .+.+++++|+|. |++|+++++.|...|++|++.+|++++...
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            457899999999 679999999999999999999998765433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05442 malate dehydrogenase; Provisional

Probab=96.44  E-value=0.048  Score=42.41  Aligned_cols=113  Identities=12%  Similarity=0.075  Sum_probs=67.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecChh--hHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDLG--RLSRFADEIARE---EKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      +.+.|+|++|.+|..++..|+.++.       .+++++.++.  .++....++...   ...++.     ++. +.    
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~-~~----   74 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD-DP----   74 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec-Ch----
Confidence            4589999999999999999998763       5888888543  233222223220   111111     111 11    


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh-c-CCceEEEecC
Q 031016           81 FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE-R-GKGTIIFTGC  151 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~g~iv~iss  151 (167)
                      .+.   ...-|++|.+||.    +..+  ..+   -.+.++.|..    +.+.+.+.+.+ . +.+.++++|-
T Consensus        75 y~~---~~daDiVVitaG~----~~k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         75 NVA---FKDADVALLVGAR----PRGP--GME---RKDLLEANGA----IFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HHH---hCCCCEEEEeCCC----CCCC--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            111   2467999999997    3333  223   3445667766    56666766666 3 2577877774

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.42  E-value=0.011  Score=44.86  Aligned_cols=44  Identities=18%  Similarity=0.291  Sum_probs=37.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEI   56 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   56 (167)
                      ++.++|.|+ ||.+++++..|.+.|+ +|.+.+|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            568999997 8999999999999998 6999999998887776543

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.41  E-value=0.059  Score=42.43  Aligned_cols=35  Identities=23%  Similarity=0.351  Sum_probs=30.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.+++++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            46788999998 7999999999999997 78887764

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.38  E-value=0.021  Score=50.64  Aligned_cols=77  Identities=21%  Similarity=0.179  Sum_probs=58.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC-Ce-------------EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG-YT-------------VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      ..|.++|.|+ |.+|...++.|++.. ++             |.+.+++.+.++++.+..     .++..+..|++|.++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSES  641 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHHH
Confidence            4678999998 899999999998753 34             666788877776665542     135678899999988


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCC
Q 031016           77 VREAFEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        77 ~~~~~~~~~~~~~i~~lv~~ag~   99 (167)
                      +.++++      ++|++|++...
T Consensus       642 L~~~v~------~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVS------QVDVVISLLPA  658 (1042)
T ss_pred             HHHhhc------CCCEEEECCCc
Confidence            877665      47999988864

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.37  E-value=0.13  Score=42.44  Aligned_cols=81  Identities=10%  Similarity=0.078  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-------------HHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-------------SRSV   77 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-------------~~~~   77 (167)
                      .+.+++|.|+ |.+|...++.+...|++|+++++++++++...+     .+.+  ++..|..+             .+..
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-----lGa~--~v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-----MGAE--FLELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----cCCe--EEeccccccccccccceeecCHHHH
Confidence            4678999997 899999999999999999999998876543332     3333  22333211             2223


Q ss_pred             HHHHHHHH-hcCCccEEEEcCCC
Q 031016           78 REAFEGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        78 ~~~~~~~~-~~~~i~~lv~~ag~   99 (167)
                      +...+.+. .....|++|+++-+
T Consensus       235 ~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       235 AAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHhCCCCEEEECccc
Confidence            33223233 35679999999955

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.37  E-value=0.038  Score=42.36  Aligned_cols=39  Identities=23%  Similarity=0.292  Sum_probs=34.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL   49 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~   49 (167)
                      +.+++++|.|. |++|+.+++.|...|++|.+.+|++++.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            46899999998 6899999999999999999999986653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.37  E-value=0.007  Score=42.04  Aligned_cols=36  Identities=14%  Similarity=0.168  Sum_probs=31.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ..+.+|.++|.|| |.+|...++.|++.|++|.+++.
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            4568999999998 69999999999999999988853

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.37  E-value=0.056  Score=40.71  Aligned_cols=42  Identities=10%  Similarity=-0.059  Sum_probs=35.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+++++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            478899999999999999998888999999988877665443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.36  E-value=0.048  Score=41.82  Aligned_cols=42  Identities=7%  Similarity=-0.023  Sum_probs=35.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+++.+|.++++.....|++|+.+.+++++.+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            478899999999999999998888999998888877655443

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.35  E-value=0.054  Score=42.53  Aligned_cols=79  Identities=9%  Similarity=0.103  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   88 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++.+.+ +.    .+.+..   .|..+. +++.+.+.++.. +
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~----lGa~~~---i~~~~~~~~~~~~v~~~~~-~  255 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KK----FGATDC---VNPKDHDKPIQQVLVEMTD-G  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HH----cCCCEE---EcccccchHHHHHHHHHhC-C
Confidence            4789999985 8999999999888999 688888888776543 22    343321   233332 234444443332 3


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|.++.+.|.
T Consensus       256 g~d~vid~~g~  266 (368)
T cd08300         256 GVDYTFECIGN  266 (368)
T ss_pred             CCcEEEECCCC
Confidence            68888888763

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.34  E-value=0.052  Score=41.44  Aligned_cols=42  Identities=19%  Similarity=0.146  Sum_probs=35.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+++++|.++++.....|++++++.++.++.+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            478899999999999999998889999998888877665444

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.34  E-value=0.12  Score=38.73  Aligned_cols=80  Identities=11%  Similarity=0.003  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .|.+++|--|.||+|..+|+.+-..|+.++......++.+..++     .+..   +.+|.+.++-++++.+-. ....+
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-----nG~~---h~I~y~~eD~v~~V~kiT-ngKGV  216 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-----NGAE---HPIDYSTEDYVDEVKKIT-NGKGV  216 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-----cCCc---ceeeccchhHHHHHHhcc-CCCCc
Confidence            58899999999999999999999999999888777666554443     2322   345666666555544322 22368


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++.-..|.
T Consensus       217 d~vyDsvG~  225 (336)
T KOG1197|consen  217 DAVYDSVGK  225 (336)
T ss_pred             eeeeccccc
Confidence            888888876

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.33  E-value=0.033  Score=42.12  Aligned_cols=42  Identities=14%  Similarity=0.091  Sum_probs=35.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|+|+++++|..+++.+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            478899999999999999999999999999988876654433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.31  E-value=0.057  Score=39.95  Aligned_cols=34  Identities=24%  Similarity=0.385  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      .++.++|.|. ||+|..+++.|+..|. ++++++.+
T Consensus        10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4677999988 7999999999999997 78888764

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.30  E-value=0.042  Score=42.39  Aligned_cols=66  Identities=18%  Similarity=0.316  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC-CHHHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS-DSRSVREAFEGV   84 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~   84 (167)
                      .|+++.|+|++| +|---++.--.-|++|++++++..+.++..+.|    +++..   +|.+ |++.++++....
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L----GAd~f---v~~~~d~d~~~~~~~~~  247 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL----GADVF---VDSTEDPDIMKAIMKTT  247 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc----Cccee---EEecCCHHHHHHHHHhh
Confidence            589999999976 887666665567999999999987777766654    44433   3666 778777777654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.29  E-value=0.073  Score=41.12  Aligned_cols=116  Identities=10%  Similarity=0.106  Sum_probs=66.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.|+|++|.+|..++..|+.++.  .+++++.+  .++...-.|.. .........+. .+ +++.   +.   ...-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~-~~~~~~i~~~~-~~-~~~y---~~---~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSH-INTPAKVTGYL-GP-EELK---KA---LKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHh-CCCcceEEEec-CC-CchH---Hh---cCCCC
Confidence            478999999999999999998884  68898887  32222222322 11111111110 11 1111   11   23679


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      ++|.+||.    +..|-  .+   -.+.++.|..-.    +.+.+.+.+.. .+.++++|-.+
T Consensus        71 ivvitaG~----~~k~g--~t---R~dll~~N~~i~----~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          71 VVVIPAGV----PRKPG--MT---RDDLFNINAGIV----RDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             EEEEeCCC----CCCCC--CC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCch
Confidence            99999997    33332  23   445577787754    44444444433 57888877654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.28  E-value=0.03  Score=43.17  Aligned_cols=115  Identities=10%  Similarity=0.173  Sum_probs=68.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.|+|+ |.+|.+++..|+.++.  .+++++.+++.++--...|..  ..........+....+    .+.+   -.-|
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~--~~~~~~~~~~i~~~~~----y~~~---~~aD   71 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSH--AAAPLGSDVKITGDGD----YEDL---KGAD   71 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhh--cchhccCceEEecCCC----hhhh---cCCC
Confidence            4789999 9999999999988864  689999886655544334432  1111111122221111    1222   3579


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      ++|.+||.    +.+|-  .+.   .+.+..|..    +.+.+.+.+.+.. .+.++.+|-
T Consensus        72 iVvitAG~----prKpG--mtR---~DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvtN  119 (313)
T COG0039          72 IVVITAGV----PRKPG--MTR---LDLLEKNAK----IVKDIAKAIAKYAPDAIVLVVTN  119 (313)
T ss_pred             EEEEeCCC----CCCCC--CCH---HHHHHhhHH----HHHHHHHHHHhhCCCeEEEEecC
Confidence            99999997    44544  333   445777776    4455555555544 366666654

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.28  E-value=0.1  Score=37.90  Aligned_cols=36  Identities=19%  Similarity=0.248  Sum_probs=32.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      +.+|.++|.|+ |.+|..-++.|++.|++|++++.+.
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~   42 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL   42 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            57899999998 6999999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=96.28  E-value=0.14  Score=40.76  Aligned_cols=79  Identities=19%  Similarity=0.111  Sum_probs=48.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|. ++|++|..+++.+...|++++++ ++++++++... .    .+.+    .++..+..+..+.+.++.....
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~-~----~Ga~----~v~~~~~~~~~~~v~~~~~~~g  254 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR-S----FGCE----TVDLSKDATLPEQIEQILGEPE  254 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-H----cCCe----EEecCCcccHHHHHHHHcCCCC
Confidence            47889995 55899999999888889986554 55554443332 2    4443    1333332233333333322235


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|.+|.+.|.
T Consensus       255 ~Dvvid~~G~  264 (393)
T TIGR02819       255 VDCAVDCVGF  264 (393)
T ss_pred             CcEEEECCCC
Confidence            9999999997

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.28  E-value=0.079  Score=41.98  Aligned_cols=35  Identities=20%  Similarity=0.383  Sum_probs=30.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35778999998 7999999999999997 78888764

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.26  E-value=0.081  Score=40.01  Aligned_cols=35  Identities=20%  Similarity=0.385  Sum_probs=29.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35678899988 6999999999999994 78888764

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.25  E-value=0.016  Score=48.22  Aligned_cols=72  Identities=15%  Similarity=0.267  Sum_probs=51.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ..++|.|. |.+|+.+++.|.++|.++++++.++++.++..+     .  ....+..|.+|++..+++=     ..+.|.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-----~--g~~~i~GD~~~~~~L~~a~-----i~~a~~  484 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-----R--GIRAVLGNAANEEIMQLAH-----LDCARW  484 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----C--CCeEEEcCCCCHHHHHhcC-----ccccCE
Confidence            34677776 799999999999999999999999887665542     2  3667788999887665321     124565


Q ss_pred             EEEcC
Q 031016           93 LVYNA   97 (167)
Q Consensus        93 lv~~a   97 (167)
                      ++.+.
T Consensus       485 viv~~  489 (558)
T PRK10669        485 LLLTI  489 (558)
T ss_pred             EEEEc
Confidence            55444

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.23  E-value=0.09  Score=35.60  Aligned_cols=76  Identities=20%  Similarity=0.248  Sum_probs=47.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh-------------------hhHHHHHHHHHhhc-CCcEEEEEeecCC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARDL-------------------GRLSRFADEIAREE-KSQVFAIRIDCSD   73 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~-~~~~~~~~~D~~~   73 (167)
                      ++|.|+ |++|..+++.|+..|. ++.+++.+.                   .+.+.+.+.++... ..++..+..++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            688887 8999999999999998 688886541                   23444455555422 2344555545443


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCC
Q 031016           74 SRSVREAFEGVLSLGFVEVLVYNAY   98 (167)
Q Consensus        74 ~~~~~~~~~~~~~~~~i~~lv~~ag   98 (167)
                      ... .   +   .+.+.|++|.+..
T Consensus        81 ~~~-~---~---~~~~~diVi~~~d   98 (143)
T cd01483          81 DNL-D---D---FLDGVDLVIDAID   98 (143)
T ss_pred             hhH-H---H---HhcCCCEEEECCC
Confidence            221 1   1   1246777777764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.23  E-value=0.051  Score=43.95  Aligned_cols=75  Identities=13%  Similarity=0.063  Sum_probs=48.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.+|.++|+|.+ +.|.+.++.|.++|++|.+.+.++...  ..+.++. ....+.++..+..  +.   .+      ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~-~~~gi~~~~g~~~--~~---~~------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGK-MFDGLVFYTGRLK--DA---LD------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhh-ccCCcEEEeCCCC--HH---HH------hC
Confidence            457899999985 999999999999999999988755431  1122322 1122333332211  11   11      25


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      .|.+|..+|+
T Consensus        68 ~d~vv~spgi   77 (445)
T PRK04308         68 FDILALSPGI   77 (445)
T ss_pred             CCEEEECCCC
Confidence            7999999998

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.22  E-value=0.096  Score=40.05  Aligned_cols=42  Identities=12%  Similarity=0.033  Sum_probs=35.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+++++|..+++.+...|++++++.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            468899999999999999999999999988887776654443

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.21  E-value=0.021  Score=38.91  Aligned_cols=43  Identities=16%  Similarity=0.088  Sum_probs=36.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      +++||.++|.|-+.-+|+.++..|.++|++|.+..++...+++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            4689999999999999999999999999999888765443433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.20  E-value=0.065  Score=42.07  Aligned_cols=79  Identities=15%  Similarity=0.169  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   88 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++.+.+ +.    .+.+.. +  |..+. +++.+.+.++.. +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~----~Ga~~~-i--~~~~~~~~~~~~v~~~~~-~  256 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK----FGVTEF-V--NPKDHDKPVQEVIAEMTG-G  256 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----cCCceE-E--cccccchhHHHHHHHHhC-C
Confidence            4788999986 8999999988888898 799998887765543 22    333211 1  22221 234444443331 2


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|+++.+.|.
T Consensus       257 ~~d~vid~~G~  267 (369)
T cd08301         257 GVDYSFECTGN  267 (369)
T ss_pred             CCCEEEECCCC
Confidence            57888877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.20  E-value=0.043  Score=43.52  Aligned_cols=83  Identities=19%  Similarity=0.210  Sum_probs=55.3

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016            1 MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus         1 ~~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      |-++-.+.....++++|+|++ ..|+.+++.+.+.|++|++++.++......   .    ..  ..+..|..|.+.+.++
T Consensus         1 ~~~~~~~~~~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~----ad--~~~~~~~~d~~~l~~~   70 (395)
T PRK09288          1 MTRLGTPLSPSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V----AH--RSHVIDMLDGDALRAV   70 (395)
T ss_pred             CccccCCCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h----hh--heEECCCCCHHHHHHH
Confidence            334444444456789999975 689999999999999999988766432111   1    01  2355677888777766


Q ss_pred             HHHHHhcCCccEEEEcC
Q 031016           81 FEGVLSLGFVEVLVYNA   97 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~a   97 (167)
                      +++.    ++|.++...
T Consensus        71 ~~~~----~id~vi~~~   83 (395)
T PRK09288         71 IERE----KPDYIVPEI   83 (395)
T ss_pred             HHHh----CCCEEEEee
Confidence            6542    588887644

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.19  E-value=0.039  Score=43.42  Aligned_cols=78  Identities=18%  Similarity=0.142  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|.|+ |++|...++.+...|+ +|+++++++++++.+ +.    .+.+. +  .|..+++..++ +.+.. .++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~----~Ga~~-~--i~~~~~~~~~~-i~~~~-~~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RE----LGATA-T--VNAGDPNAVEQ-VRELT-GGG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HH----cCCce-E--eCCCchhHHHH-HHHHh-CCC
Confidence            4788999985 8999999888888899 588888877765433 22    33321 1  23333322222 22222 125


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.+.|.
T Consensus       260 ~d~vid~~G~  269 (371)
T cd08281         260 VDYAFEMAGS  269 (371)
T ss_pred             CCEEEECCCC
Confidence            7888887764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.19  E-value=0.26  Score=38.32  Aligned_cols=121  Identities=12%  Similarity=0.100  Sum_probs=69.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +.+.+.|+|+ |.+|..++..++.+|. .|++++.+++.+..-.-.+...   .+....+..  .+|.+.    +     
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----l-----   72 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----I-----   72 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH----h-----
Confidence            3467899995 8899999999999995 8999998877543111111110   111222221  122221    2     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCC-CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNF-TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                       ..-|++|.++|.   . ..+- .+.+.+ -.+.+..|+.    +.+.+.+.+.+.. .+.++++|-.+
T Consensus        73 -~~aDiVI~tag~---~-~~~~~~~~~~~-r~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 -AGSDVVIVTAGL---T-KRPGKSDKEWN-RDDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             -CCCCEEEECCCC---C-CCCCCCcCCCC-HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence             357999999997   2 2221 111111 2444555643    5666666666654 45777777544

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.17  E-value=0.037  Score=41.78  Aligned_cols=39  Identities=23%  Similarity=0.149  Sum_probs=31.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLS   50 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~   50 (167)
                      .+++++|.|+ |++|...++.+...|++ |+++++++++.+
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            5788999987 89999999988888996 877777766543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.17  E-value=0.061  Score=40.78  Aligned_cols=41  Identities=20%  Similarity=0.100  Sum_probs=35.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      .+.+++|.|+++++|.++++.....|++|+.+.+++++.+.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  182 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL  182 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            46899999999999999999999999999888887765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.17  E-value=0.067  Score=42.52  Aligned_cols=40  Identities=13%  Similarity=0.037  Sum_probs=33.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      .+.+++|.|+++++|..+++.+...|++++++.+++++.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~  228 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE  228 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            4689999999999999999888889999888877665543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.15  E-value=0.05  Score=41.49  Aligned_cols=80  Identities=16%  Similarity=0.094  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|+|+++++|..+++.+...|++|+.+++++++.+.+ +.    .+.+. +  .|..+.+..+++. ......++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~----~g~~~-~--~~~~~~~~~~~~~-~~~~~~~~  212 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA----LGADV-A--VDYTRPDWPDQVR-EALGGGGV  212 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH----cCCCE-E--EecCCccHHHHHH-HHcCCCCc
Confidence            367899999999999999999999999999988877665443 22    23221 1  2333333233222 21112358


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++++.|.
T Consensus       213 d~vl~~~g~  221 (324)
T cd08244         213 TVVLDGVGG  221 (324)
T ss_pred             eEEEECCCh
Confidence            888887654

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.14  E-value=0.12  Score=39.65  Aligned_cols=113  Identities=13%  Similarity=0.149  Sum_probs=69.5

Q ss_pred             EEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeec-CCHHHHHHHHHHHHhcCCccE
Q 031016           16 AIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC-SDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        16 lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      .|.|+ |.+|..++..++.+|  ..+++++.+++.++.....+..... ......... ++.       +.+   ..-|+
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~-~~~~~~i~~~~~~-------~~l---~~aDi   69 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASA-FLATGTIVRGGDY-------ADA---ADADI   69 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhcc-ccCCCeEEECCCH-------HHh---CCCCE
Confidence            57887 679999999999988  5799999988877777666655211 111111111 221       121   35799


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      +|.++|.    +..+  ..+.   .+.+..|+.    +.+.+.+.+.+.. .+.++++|..+
T Consensus        70 VIitag~----p~~~--~~~R---~~l~~~n~~----i~~~~~~~i~~~~p~~~viv~sNP~  118 (300)
T cd00300          70 VVITAGA----PRKP--GETR---LDLINRNAP----ILRSVITNLKKYGPDAIILVVSNPV  118 (300)
T ss_pred             EEEcCCC----CCCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccChH
Confidence            9999997    2222  2233   334555555    4555555555543 57888887543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.14  E-value=0.043  Score=42.68  Aligned_cols=84  Identities=12%  Similarity=0.221  Sum_probs=57.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhH---------HHHHHHHHhhcCCcEEEEEeecCCHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRL---------SRFADEIAREEKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~---------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   78 (167)
                      .+.+|++-|.|. |.||+.+++++...|.+|+..++ .+...         ..+-+.+   ...++..+.+.+|++  -+
T Consensus       139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL---~~sDiv~lh~PlT~e--T~  212 (324)
T COG0111         139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELL---AEADILTLHLPLTPE--TR  212 (324)
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHH---hhCCEEEEcCCCCcc--hh
Confidence            467999999998 79999999999999999999988 22211         1122233   346888888888865  34


Q ss_pred             HHHHHHH--hcCCccEEEEcCC
Q 031016           79 EAFEGVL--SLGFVEVLVYNAY   98 (167)
Q Consensus        79 ~~~~~~~--~~~~i~~lv~~ag   98 (167)
                      .++..-.  ...+=.++||++=
T Consensus       213 g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         213 GLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECCC
Confidence            4443332  3333347777763

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.14  E-value=0.087  Score=38.11  Aligned_cols=37  Identities=16%  Similarity=0.209  Sum_probs=33.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .+.+|.++|.|+ |.+|...++.|.+.|++|+++++..
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            468999999999 7999999999999999999987653

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.13  E-value=0.0043  Score=39.87  Aligned_cols=36  Identities=17%  Similarity=0.210  Sum_probs=31.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      +++|.++|+|+ |.+|..-++.|++.|++|.+++...
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            57899999999 8999999999999999999998874

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.13  E-value=0.088  Score=38.05  Aligned_cols=35  Identities=26%  Similarity=0.411  Sum_probs=30.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +..+.++|.|+ ||+|..+++.|+..|. ++++++++
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35678999999 7999999999999998 69998876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.13  E-value=0.044  Score=42.29  Aligned_cols=37  Identities=14%  Similarity=0.108  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      .+++++|.|+++++|.++++.....|++++++.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            4789999999999999999999999999988877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.11  E-value=0.08  Score=40.68  Aligned_cols=78  Identities=12%  Similarity=0.170  Sum_probs=46.6

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ++++++|++|++|...++.....|++|+++++++++.+.+.+     .+.+. ++  |..+++..++ +.+......+|+
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-----~g~~~-~i--~~~~~~~~~~-v~~~~~~~~~d~  215 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-----IGAEY-VL--NSSDPDFLED-LKELIAKLNATI  215 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----cCCcE-EE--ECCCccHHHH-HHHHhCCCCCcE
Confidence            444445999999999998777789999998888766554432     33322 22  2222222222 222221235888


Q ss_pred             EEEcCCC
Q 031016           93 LVYNAYQ   99 (167)
Q Consensus        93 lv~~ag~   99 (167)
                      ++.+.|.
T Consensus       216 vid~~g~  222 (324)
T cd08291         216 FFDAVGG  222 (324)
T ss_pred             EEECCCc
Confidence            8887653

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.10  E-value=0.13  Score=41.64  Aligned_cols=38  Identities=26%  Similarity=0.401  Sum_probs=33.1

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      ++.|+||.|.+|.++++.|.++|++|.+.+|+++...+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~   39 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE   39 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence            47899999999999999999999999999998765433

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.08  E-value=0.09  Score=38.97  Aligned_cols=30  Identities=20%  Similarity=0.514  Sum_probs=25.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      ++|.|+ ||+|-++++.|+..|. ++.+++.+
T Consensus         2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            678886 7999999999999997 78888775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.08  E-value=0.21  Score=38.34  Aligned_cols=117  Identities=19%  Similarity=0.211  Sum_probs=64.5

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeec-CCHHHHHHHHHHHHhcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDC-SDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.+.|+|+ |.+|..++..++.+|. +|++.+++++.++.....+............... ++.+   . +      ..-
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~---~-~------~~a   71 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE---D-I------AGS   71 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH---H-H------CCC
Confidence            45889998 8999999999999875 8999999877655433333221100000011111 2221   1 2      356


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      |++|.++|.    +..+  ..+.   .+.+..|+.    +.+.+.+.+.+.. .+.+|+++-..
T Consensus        72 DiVii~~~~----p~~~--~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~viv~tNP~  122 (307)
T PRK06223         72 DVVVITAGV----PRKP--GMSR---DDLLGINAK----IMKDVAEGIKKYAPDAIVIVVTNPV  122 (307)
T ss_pred             CEEEECCCC----CCCc--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence            999999987    2222  2222   233444554    4444444444432 35677776533

>PLN02494 adenosylhomocysteinase

Probab=96.08  E-value=0.074  Score=43.28  Aligned_cols=38  Identities=21%  Similarity=0.233  Sum_probs=34.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR   48 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~   48 (167)
                      +.+|+++|.|. |.||+.+++++...|++|+++++++.+
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            57999999999 599999999999999999999887654

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.08  E-value=0.1  Score=37.85  Aligned_cols=66  Identities=15%  Similarity=0.197  Sum_probs=43.7

Q ss_pred             EEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhh----------cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           17 IVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIARE----------EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        17 ItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ..+++|.||.+++++|+..|+.|++.+| .++....+.+.+...          ...++.++.+.+   +.+..++.++.
T Consensus         5 ~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~l~   81 (211)
T COG2085           5 AIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAELR   81 (211)
T ss_pred             EEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHHHH
Confidence            3455689999999999999999988855 455555555554331          234566666665   34455555555

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.08  E-value=0.061  Score=41.93  Aligned_cols=64  Identities=14%  Similarity=0.254  Sum_probs=45.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH---HHHhh-cCCcEEEEEeecCC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD---EIARE-EKSQVFAIRIDCSD   73 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~---~l~~~-~~~~~~~~~~D~~~   73 (167)
                      .+.++++.|.|. |.||+.+|+.|...|++|++.++++.......+   .+... ...++..+.+..+.
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            467899999987 789999999999999999999987644222111   12111 35577777777664

>PLN02928 oxidoreductase family protein

Probab=96.08  E-value=0.086  Score=41.39  Aligned_cols=36  Identities=17%  Similarity=0.242  Sum_probs=33.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      .+.+|++.|.|. |.||+.+++.+...|++|+..+|+
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            468999999998 899999999999999999998875

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.08  E-value=0.23  Score=38.32  Aligned_cols=110  Identities=13%  Similarity=0.111  Sum_probs=65.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.|.|+ |.+|..++..|+.+|  ..|++++++++.++.....+....  .......   .++.+       .+   ..-
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~---~~d~~-------~l---~~a   68 (308)
T cd05292           3 VAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY---AGDYA-------DC---KGA   68 (308)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe---eCCHH-------Hh---CCC
Confidence            788898 899999999999998  479999998876654333343211  1111111   12221       12   467


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      |++|.++|.   . ..+  ..   ...+.+..|..    +.+.+.+.+.+.. .|.+++++.
T Consensus        69 DiViita~~---~-~~~--~~---~r~dl~~~n~~----i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          69 DVVVITAGA---N-QKP--GE---TRLDLLKRNVA----IFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CEEEEccCC---C-CCC--CC---CHHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence            999999997   2 222  12   23344555555    4455555444433 577777764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.07  E-value=0.02  Score=43.91  Aligned_cols=77  Identities=9%  Similarity=0.146  Sum_probs=52.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++.||.+.|.|.++-+|+.++..|.++|++|.+..+....+.+..+      ..++.  ..-+.+++.++...  +    
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~------~ADIV--Isavg~~~~v~~~~--i----  221 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR------QADIV--VAAVGRPRLIDADW--L----  221 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh------cCCEE--EEecCChhcccHhh--c----
Confidence            4689999999999999999999999999999998766554443332      23433  33455565554322  1    


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      +...+|...|+
T Consensus       222 k~GaiVIDvgi  232 (301)
T PRK14194        222 KPGAVVIDVGI  232 (301)
T ss_pred             cCCcEEEEecc
Confidence            33455656666

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.06  E-value=0.023  Score=35.60  Aligned_cols=40  Identities=28%  Similarity=0.443  Sum_probs=32.7

Q ss_pred             EEEcCCCchhHHHHHHHHHcC---CeEEEE-ecChhhHHHHHHHH
Q 031016           16 AIVGVGPNLGRSIARKFAHEG---YTVAIL-ARDLGRLSRFADEI   56 (167)
Q Consensus        16 lItGa~~~iG~~~a~~l~~~g---~~v~~~-~r~~~~~~~~~~~l   56 (167)
                      .|. |+|.+|.++++.|.+.|   .+|.+. +|++++..++.+..
T Consensus         3 ~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    3 GII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            344 56899999999999999   899866 89998888776653

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.04  E-value=0.074  Score=41.13  Aligned_cols=30  Identities=20%  Similarity=0.516  Sum_probs=26.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      ++|+|+ ||+|-++++.|+..|. ++.+++.+
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            788887 8999999999999997 78888764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.03  E-value=0.026  Score=42.99  Aligned_cols=39  Identities=15%  Similarity=0.222  Sum_probs=34.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      .+.+|.++|+|.+.-+|+.++..|.++|++|.+..+...
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~  193 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK  193 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence            468999999999988999999999999999988877543

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.03  E-value=0.018  Score=39.66  Aligned_cols=40  Identities=23%  Similarity=0.361  Sum_probs=32.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI   56 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   56 (167)
                      |+++|+++-+|+++|..|.++|-+|+++  +.+.-+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999988  444444444444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.02  E-value=0.12  Score=39.96  Aligned_cols=83  Identities=16%  Similarity=0.011  Sum_probs=59.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.++||.|| |.||+..-...-.-|+ +|++++-.+++++-..+     .|.+.......-.+.+.+.+.++....-..
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-----~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~  242 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-----FGATVTDPSSHKSSPQELAELVEKALGKKQ  242 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-----hCCeEEeeccccccHHHHHHHHHhhccccC
Confidence            4788999999 6999888777777788 78888888877765543     566655544444456666666665541124


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+.|.|.|.
T Consensus       243 ~d~~~dCsG~  252 (354)
T KOG0024|consen  243 PDVTFDCSGA  252 (354)
T ss_pred             CCeEEEccCc
Confidence            9999999986

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=96.02  E-value=0.082  Score=40.65  Aligned_cols=42  Identities=12%  Similarity=0.101  Sum_probs=35.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+++.+|..+++.+...|++|+.+.+++++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467899999999999999999999999998888877665443

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.02  E-value=0.095  Score=40.90  Aligned_cols=39  Identities=18%  Similarity=0.201  Sum_probs=32.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLS   50 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~   50 (167)
                      .+++++|+| +|++|..+++.+...|+ +|+++++++++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            578899997 59999999988888999 8988888776554

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.99  E-value=0.06  Score=42.01  Aligned_cols=34  Identities=24%  Similarity=0.301  Sum_probs=29.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      .+++++|+|+ |++|...++.+...|++|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            4788999986 999999998888889999999884

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=95.97  E-value=0.099  Score=39.67  Aligned_cols=119  Identities=11%  Similarity=0.072  Sum_probs=66.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      ..+..+.|.||+||||..+...|-..-.  .+.+.+-..  ..-....+++ .+.+..  -+..+-+++++..++     
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~--~~GVaaDlSH-I~T~s~--V~g~~g~~~L~~al~-----   95 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIAN--TPGVAADLSH-INTNSS--VVGFTGADGLENALK-----   95 (345)
T ss_pred             cCcceEEEEecCCccCccHHHHHhcCcccceeeeeeccc--CCcccccccc-cCCCCc--eeccCChhHHHHHhc-----
Confidence            3566789999999999999887765432  233333211  1111112221 111111  123343555665555     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC  151 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  151 (167)
                       .-|++|.-||.    |+.|-  ++.|+   .|++|..=.-.+..++...-.   +..|.+||-
T Consensus        96 -~advVvIPAGV----PRKPG--MTRDD---LFn~NAgIv~~l~~aia~~cP---~A~i~vIsN  146 (345)
T KOG1494|consen   96 -GADVVVIPAGV----PRKPG--MTRDD---LFNINAGIVKTLAAAIAKCCP---NALILVISN  146 (345)
T ss_pred             -CCCEEEecCCC----CCCCC--CcHHH---hhhcchHHHHHHHHHHHhhCc---cceeEeecC
Confidence             56999999998    44443  45444   588888766555555544332   246666664

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.95  E-value=0.057  Score=41.13  Aligned_cols=41  Identities=10%  Similarity=0.082  Sum_probs=35.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      .+.+++|.|+++++|.++++.+...|++++++.+++++.+.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  178 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE  178 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence            46889999999999999999999999999888887765443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.94  E-value=0.027  Score=39.23  Aligned_cols=77  Identities=13%  Similarity=0.151  Sum_probs=46.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++.||.++|.|.+.-+|+.++..|.++|+.|.+.......+++..      ...++.+.  -+..+..++.      ++=
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~------~~ADIVVs--a~G~~~~i~~------~~i   98 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT------RRADIVVS--AVGKPNLIKA------DWI   98 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH------TTSSEEEE---SSSTT-B-G------GGS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee------eeccEEee--eecccccccc------ccc
Confidence            468999999999999999999999999999988766554444332      23444443  3344444331      223


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      +.+.+|...|+
T Consensus        99 k~gavVIDvG~  109 (160)
T PF02882_consen   99 KPGAVVIDVGI  109 (160)
T ss_dssp             -TTEEEEE--C
T ss_pred             cCCcEEEecCC
Confidence            55777777777

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.92  E-value=0.036  Score=42.25  Aligned_cols=42  Identities=19%  Similarity=0.234  Sum_probs=35.2

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      +.+.|.|+ |.+|..+|..++..|++|++.+++++.+++..+.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~   47 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNR   47 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            45778888 7999999999999999999999998876654433

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.91  E-value=0.17  Score=38.92  Aligned_cols=109  Identities=13%  Similarity=0.173  Sum_probs=66.4

Q ss_pred             EEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc---CCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           17 IVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE---KSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        17 ItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      |.|+ |.+|..++..|+.++.  .+++++.+++.++.....+....   +.+..+.   ..+.+       .+   ..-|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~-------~~---~daD   66 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYS-------DC---KDAD   66 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHH-------HH---CCCC
Confidence            3565 8999999999998874  69999998776665555554311   1222221   12221       11   3579


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      ++|.+||.    +..|  ..+.   .+.++.|..    +.+.+.+.+.+.. .+.++++|-.
T Consensus        67 ivVitag~----~rk~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsNP  115 (299)
T TIGR01771        67 LVVITAGA----PQKP--GETR---LELVGRNVR----IMKSIVPEVVKSGFDGIFLVATNP  115 (299)
T ss_pred             EEEECCCC----CCCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCH
Confidence            99999997    3333  2333   345666766    4455555555443 5788888753

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.91  E-value=0.061  Score=42.06  Aligned_cols=41  Identities=17%  Similarity=0.185  Sum_probs=33.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~   52 (167)
                      .+++++|.|+ |++|...++.....|++ |+++++++++.+.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4788999985 89999999988888985 88888877665444

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.89  E-value=0.12  Score=40.85  Aligned_cols=42  Identities=12%  Similarity=0.023  Sum_probs=35.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|+|+++++|.+++..+...|++++++.+++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            468999999999999999988888999988888877665544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.84  E-value=0.086  Score=40.75  Aligned_cols=62  Identities=13%  Similarity=0.181  Sum_probs=45.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH------HHHHHHHHhhcCCcEEEEEeecCCH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL------SRFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .+.+|++.|.|- |.||+.+++++...|.+|+..++.....      ..+.+.+   ...++..+.+.++++
T Consensus       142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell---~~sDvv~lh~Plt~~  209 (311)
T PRK08410        142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELL---KTSDIISIHAPLNEK  209 (311)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHh---hcCCEEEEeCCCCch
Confidence            568999999998 8999999999999999999887743211      1122222   346788888888865

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.81  E-value=0.11  Score=37.37  Aligned_cols=34  Identities=24%  Similarity=0.444  Sum_probs=28.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      .+++++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        20 ~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5677899986 5699999999999998 68787654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.79  E-value=0.036  Score=38.78  Aligned_cols=42  Identities=17%  Similarity=0.182  Sum_probs=32.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .....++|+|+ |..|...++-+...|++|+..+.......+.
T Consensus        18 ~~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~   59 (168)
T PF01262_consen   18 VPPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQL   59 (168)
T ss_dssp             E-T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred             CCCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence            35678899986 7999999999999999999998877665543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK07411 hypothetical protein; Validated

Probab=95.79  E-value=0.13  Score=41.05  Aligned_cols=35  Identities=20%  Similarity=0.264  Sum_probs=29.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +...+++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35788999998 6999999999999997 78887664

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.78  E-value=0.095  Score=35.15  Aligned_cols=41  Identities=22%  Similarity=0.361  Sum_probs=29.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC--CeEEEEec--ChhhHHHHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEG--YTVAILAR--DLGRLSRFADE   55 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r--~~~~~~~~~~~   55 (167)
                      +.|.|+||.||.....-+.+..  ++|+.+.-  +-+.+.+.+++
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~   45 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQARE   45 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHH
Confidence            4799999999999999988876  67877643  33334444333

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.78  E-value=0.1  Score=40.91  Aligned_cols=41  Identities=12%  Similarity=0.107  Sum_probs=33.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+ |++|...++.....|+ +|+++++++++.+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            4788999975 8999999998888898 688888877665544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.78  E-value=0.095  Score=40.46  Aligned_cols=42  Identities=19%  Similarity=0.117  Sum_probs=36.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            468999999999999999999999999999998887665433

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.77  E-value=0.14  Score=39.72  Aligned_cols=62  Identities=11%  Similarity=0.217  Sum_probs=45.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-----HHHHHHHHHhhcCCcEEEEEeecCCH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-----LSRFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .+.+|++.|.|- |.||+.+++++...|.+|+..++....     ...+.+.+   ...++..+.+.+|.+
T Consensus       144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell---~~sDiv~l~~Plt~~  210 (314)
T PRK06932        144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVL---KQADIVTLHCPLTET  210 (314)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHH---HhCCEEEEcCCCChH
Confidence            568999999998 899999999999999999888764321     11122223   346788888888754

>PLN02827 Alcohol dehydrogenase-like

Probab=95.76  E-value=0.13  Score=40.64  Aligned_cols=79  Identities=11%  Similarity=0.082  Sum_probs=47.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   88 (167)
                      .+++++|.|+ |++|..+++.....|++ |+++++++++.+.+ +.    .+.+. +  .|..+. ++..+.+.++.. +
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~----lGa~~-~--i~~~~~~~~~~~~v~~~~~-~  262 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KT----FGVTD-F--INPNDLSEPIQQVIKRMTG-G  262 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HH----cCCcE-E--EcccccchHHHHHHHHHhC-C
Confidence            4789999986 89999999988888985 77777776654433 22    33321 1  232221 233333333321 2


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|.++.+.|.
T Consensus       263 g~d~vid~~G~  273 (378)
T PLN02827        263 GADYSFECVGD  273 (378)
T ss_pred             CCCEEEECCCC
Confidence            57777777764

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.75  E-value=0.075  Score=41.31  Aligned_cols=79  Identities=16%  Similarity=0.118  Sum_probs=48.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|.|+ +++|...++.+...|+ +|+++++++++.+.+ +.    .+.+..   .|..+.+..+++ .+....+.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~----~ga~~~---i~~~~~~~~~~l-~~~~~~~~  241 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EE----LGATIV---LDPTEVDVVAEV-RKLTGGGG  241 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH----hCCCEE---ECCCccCHHHHH-HHHhCCCC
Confidence            4788999985 8999999999889999 788888777665433 22    233221   233333322222 22211234


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|.++.+.|.
T Consensus       242 ~d~vid~~g~  251 (351)
T cd08233         242 VDVSFDCAGV  251 (351)
T ss_pred             CCEEEECCCC
Confidence            8888888763

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.74  E-value=0.27  Score=37.61  Aligned_cols=89  Identities=15%  Similarity=0.138  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHH-HcCCeEEEE--ecChh-----h----HHHHHHHHHhhcCCcEEEEEeecCCHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFA-HEGYTVAIL--ARDLG-----R----LSRFADEIAREEKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~-~~g~~v~~~--~r~~~-----~----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   78 (167)
                      ..|.+||.|+++|.|++.=-..+ .-|+.-+.+  .|...     .    -....+......+--..-+..|.-+.+.-+
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            46899999999999976433222 135554443  23211     0    011122222214445566777888887788


Q ss_pred             HHHHHHH-hcCCccEEEEcCCC
Q 031016           79 EAFEGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        79 ~~~~~~~-~~~~i~~lv~~ag~   99 (167)
                      ..++.++ .+|++|.+|+.-+.
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccC
Confidence            8888888 89999999988754

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.73  E-value=0.064  Score=41.56  Aligned_cols=62  Identities=13%  Similarity=0.096  Sum_probs=45.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh----HHHHHHHHHhhcCCcEEEEEeecCCH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR----LSRFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .+.+|++.|.|- |.||+++++++...|.+|+..++....    ...+.+.+   ...++..+.+.++.+
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell---~~sDiv~l~lPlt~~  210 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELL---PQVDALTLHCPLTEH  210 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHH---HhCCEEEECCCCChH
Confidence            468999999998 899999999999999999888765321    11122222   246788888887754

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.72  E-value=0.14  Score=39.71  Aligned_cols=88  Identities=15%  Similarity=0.179  Sum_probs=55.6

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH------HHHh-hcCCcEEEEEeecCCHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD------EIAR-EEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~------~l~~-~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      ..+.+|++.|.|- |.+|+++|+.|...|.+|++..|+....+....      .+.. ....++..+.+.  +++. +.+
T Consensus        12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~~V   87 (335)
T PRK13403         12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-AHV   87 (335)
T ss_pred             hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-HHH
Confidence            3468999999998 799999999999999999887665322211110      1111 024455555554  3333 444


Q ss_pred             H-HHHH-hcCCccEEEEcCCC
Q 031016           81 F-EGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        81 ~-~~~~-~~~~i~~lv~~ag~   99 (167)
                      + +++. ...+=.+++...|+
T Consensus        88 ~~~eil~~MK~GaiL~f~hgf  108 (335)
T PRK13403         88 YKAEVEENLREGQMLLFSHGF  108 (335)
T ss_pred             HHHHHHhcCCCCCEEEECCCc
Confidence            4 3455 55555678888886

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.71  E-value=0.15  Score=40.78  Aligned_cols=34  Identities=24%  Similarity=0.316  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      ....++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            5678999998 6999999999999997 78887664

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.71  E-value=0.058  Score=44.02  Aligned_cols=74  Identities=11%  Similarity=-0.029  Sum_probs=49.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..++.++|.|+ |++|+++|+.|.++|++|.++++++. ......+.++. .+.+  +...+-..          .  ..
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~--~~~~~~~~----------~--~~   77 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGAT--VRLGPGPT----------L--PE   77 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCE--EEECCCcc----------c--cC
Confidence            46788999998 78999999999999999999985543 33344455544 3433  22221111          0  12


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|.+|..+|+
T Consensus        78 ~~D~Vv~s~Gi   88 (480)
T PRK01438         78 DTDLVVTSPGW   88 (480)
T ss_pred             CCCEEEECCCc
Confidence            57999999998

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.69  E-value=0.033  Score=42.43  Aligned_cols=38  Identities=24%  Similarity=0.246  Sum_probs=33.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .+.+|.++|.|+++-.|+.++..|.++|++|.+..|..
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            45799999999987799999999999999988877743

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.67  E-value=0.035  Score=44.55  Aligned_cols=41  Identities=17%  Similarity=0.230  Sum_probs=35.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      +.+++++|.|+ |.||+.+++.+...|++|+++++++.++..
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~  240 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ  240 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence            46999999999 599999999999999999999888766543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.64  E-value=0.22  Score=35.89  Aligned_cols=34  Identities=26%  Similarity=0.513  Sum_probs=28.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      .+..++|.|++ |+|.++++.|+..|. ++.+++.+
T Consensus        18 ~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          18 RSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             hhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            56778999885 699999999999997 68888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.63  E-value=0.11  Score=40.37  Aligned_cols=40  Identities=15%  Similarity=0.112  Sum_probs=32.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSR   51 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~   51 (167)
                      .+++++|.|+ |++|...++.+...|++ |+++++++++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            4789999975 89999999888889997 6777777666543

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=95.63  E-value=0.11  Score=31.48  Aligned_cols=32  Identities=22%  Similarity=0.351  Sum_probs=27.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      ++|.|+ |.+|..+|..|.+.|.+|.++.+++.
T Consensus         2 vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    2 VVVIGG-GFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEESS-SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHhCcEEEEEeccch
Confidence            567777 79999999999999999999988653

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=95.63  E-value=0.22  Score=39.07  Aligned_cols=79  Identities=16%  Similarity=0.115  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.+++|+|+ |.||+..+..+...|+ +|+++++++++++...+..    +.....   +..+++.... +.+......+
T Consensus       169 ~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~----g~~~~~---~~~~~~~~~~-~~~~t~g~g~  239 (350)
T COG1063         169 GGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAG----GADVVV---NPSEDDAGAE-ILELTGGRGA  239 (350)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhC----CCeEee---cCccccHHHH-HHHHhCCCCC
Confidence            348999998 7999999888888887 6777788888876655432    222211   1111112222 2221111269


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.+|=++|.
T Consensus       240 D~vie~~G~  248 (350)
T COG1063         240 DVVIEAVGS  248 (350)
T ss_pred             CEEEECCCC
Confidence            999999986

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.62  E-value=0.045  Score=38.12  Aligned_cols=42  Identities=21%  Similarity=0.204  Sum_probs=31.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      ..+.+|+++|.|= |.+|+.+|++|...|++|++...++-++-
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            3467999999987 79999999999999999999999875533

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.59  E-value=0.23  Score=40.40  Aligned_cols=113  Identities=15%  Similarity=0.064  Sum_probs=65.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHH---cCC----eEEEEec--ChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAH---EGY----TVAILAR--DLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~---~g~----~v~~~~r--~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      -.|+||||+|-||.++.-++++   .|.    .+++++.  +.+.++...-++...   ....+.+. .  .+.+    .
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~e----a  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLDV----A  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCHH----H
Confidence            5699999999999999999997   353    2566676  455555444444321   11122221 1  1111    1


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC--ceEEEecC
Q 031016           81 FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK--GTIIFTGC  151 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~iss  151 (167)
                      +      ...|++|.++|.    +..+-  .+   -.+.++.|..    +++...+.+.+...  .+|+.+.+
T Consensus       197 ~------~daDvvIitag~----prk~G--~~---R~DLL~~N~~----Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         197 F------KDAHVIVLLDDF----LIKEG--ED---LEGCIRSRVA----ICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             h------CCCCEEEECCCC----CCCcC--CC---HHHHHHHHHH----HHHHHHHHHHHhCCCCCeEEEEeC
Confidence            2      357999999997    33332  23   4445777776    44555555555443  45655554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.56  E-value=0.057  Score=41.14  Aligned_cols=37  Identities=16%  Similarity=0.179  Sum_probs=32.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++.||.++|.|.+.-+|+.++..|.++|++|.+....
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            4579999999999999999999999999999876443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	167
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-10
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		8e-09
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		9e-09
3h7a_A	252	Crystal Structure Of Short-Chain Dehydrogenase From		2e-08
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-08
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		9e-08
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-07
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		5e-07
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		7e-07
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-06
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-06
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-06
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-06
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		3e-06
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		4e-06
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-06
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		6e-06
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-06
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-05
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-05
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		3e-05
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		3e-05
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-05
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-05
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		6e-05
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-04
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-04
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		3e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		4e-04
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		4e-04
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-04
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		5e-04
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		5e-04
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		6e-04
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		7e-04
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		8e-04
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		8e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		9e-04
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		9e-04

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  +GR+ A   A +G TV  L R    +   ADEI      Q  A+  D SD
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-AGGQAIALEADVSD 88
Query: 74  SRSVREAFEG-VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               R A    VL  G ++++V NA     W P +  ++    + ++IA++  G FL   
Sbjct: 89  ELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPID--DLKPFEWDETIAVNLRGTFLTLH 146
Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             +  + +RG G I+     +S+NG   F+
Sbjct: 147 LTVPYLKQRGGGAIVVV---SSINGTRTFT 173

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +G +IAR  A +GY +A+ AR + RL + A E+ +E+  +VF   +D S 
Sbjct: 26  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 85
Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA 97
           + SV E  + VL   G V+V+V NA
Sbjct: 86  AESVEEFSKKVLERFGDVDVVVANA 110

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
          +A I G    +G +IAR  A +GY +A+ AR + RL + A E+ +E+  +VF   +D S 
Sbjct: 4  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63
Query: 74 SRSVREAFEGVLS-LGFVEVLVYNA 97
          + SV E  + VL   G V+V+V NA
Sbjct: 64 AESVEEFSKKVLERFGDVDVVVANA 88

>pdb|3H7A|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Rhodopseudomonas Palustris Length = 252

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 16  AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
           A++G G  +G  IA+KFA EG+TV    R+  +L+    EI      ++ A  +D  +  
Sbjct: 11  AVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEI-EAAGGRIVARSLDARNED 69
Query: 76  SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
            V        +   +EV ++N    V++      E +   F+K   ++    F+  ++  
Sbjct: 70  EVTAFLNAADAHAPLEVTIFNVGANVNFP---ILETTDRVFRKVWEMACWAGFVSGRESA 126
Query: 136 SGMVERGKGTIIFTGCSASLNGIAGFSELC 165
             M+  G+G I FTG +ASL G +GF+   
Sbjct: 127 RLMLAHGQGKIFFTGATASLRGGSGFAAFA 156

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  I GVGP LG ++AR+ A +G  + + AR + RL   A ++  +   +  ++  D +D
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT-DTGRRALSVGTDITD 71
Query: 74  SRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V    +  + + G V+V++ NA++  S +P  F   +F+  + +I ++  GA    Q
Sbjct: 72  DAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP--FANTTFEHMRDAIELTVFGALRLIQ 129
Query: 133 QVLSGMVERGKGTII 147
              +  +E  KG ++
Sbjct: 130 G-FTPALEESKGAVV 143

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +G+ +A  +A  G  VA+ AR    L   ADEIA     +   IR D +  
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG-VGGKALPIRCDVTQP 93
Query: 75  RSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             VR   + +   LG +++ V NA   VS Q     ++  + FQ+    +  G FL AQ 
Sbjct: 94  DQVRGMLDQMTGELGGIDIAVCNA-GIVSVQ--AMLDMPLEEFQRIQDTNVTGVFLTAQA 150
Query: 134 VLSGMVERGKGTIIFTGCSASLNG 157
               MV++G G  I T  +AS++G
Sbjct: 151 AARAMVDQGLGGTIIT--TASMSG 172

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 16/155 (10%)
Query: 14  IAAIVGVGPNLGRSIARKFA-HEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           +  + G G  +GR+IA+KFA ++   VA+ L  D  RL++   E+ R    +V  ++ D 
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLED--RLNQIVQEL-RGMGKEVLGVKADV 65
Query: 72  SDSRSV----REAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
           S  + V    R  FE   +   ++VL  NA   +    T   E+S + +++ +A++   A
Sbjct: 66  SKKKDVEEFVRRTFE---TYSRIDVLCNNA--GIMDGVTPVAEVSDELWERVLAVNLYSA 120
Query: 128 FLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           F  ++ V+  M+++GKG I+ T   A + G  GF+
Sbjct: 121 FYSSRAVIPIMLKQGKGVIVNTASIAGIRG--GFA 153

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  + G     G  I R+F  +G+ V    R   RL    DE+       ++  ++D  +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDVRN 57
Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             ++ E    + +    +++LV NA   +  +P +  + S + ++  I  ++ G     +
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAH--KASVEDWETMIDTNNKGLVYMTR 115
Query: 133 QVLSGMVERGKGTIIFTGCSA 153
            VL GMVER  G II  G +A
Sbjct: 116 AVLPGMVERNHGHIINIGSTA 136

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           ++ + G    +GR+IA K A  G TV I      R    A+EIA +   +   + ++   
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS 68
Query: 74  SRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             S+ +AFE + +L   +++LV NA      +   F  +S   +++ + ++  G FL  Q
Sbjct: 69  EESINKAFEEIYNLVDGIDILVNNAGIT---RDKLFLRMSLLDWEEVLKVNLTGTFLVTQ 125
Query: 133 QVLSGMVERGKGTII-------FTGCSASLN------GIAGFSE 163
             L  M+++  G I+       FTG    +N      G+ GF++
Sbjct: 126 NSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTK 169

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +G +IA++ A +G+ VA+  R  G                +F + +D +DS +V  AF  
Sbjct: 27  IGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVEVDVTDSDAVDRAFTA 74
Query: 84  VLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
           V    G VEVLV NA           TE   + F+K I  +  GAF  AQ+    M    
Sbjct: 75  VEEHQGPVEVLVSNAGLSADAFLMRMTE---EKFEKVINANLTGAFRVAQRASRSMQRNK 131
Query: 143 KGTIIFTGCSASLNGI 158
            G +IF G  + L GI
Sbjct: 132 FGRMIFIGSVSGLWGI 147

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           + G G  +GR+ A  FA  G  V +   +     R A+EI     S+ F +R+D S ++ 
Sbjct: 32  VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG----SKAFGVRVDVSSAKD 87
Query: 77  VREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
                E   +  G V+VLV NA    +    N   I  +++ +  +++  G FLC++ V+
Sbjct: 88  AESXVEKTTAKWGRVDVLVNNAGFGTTG---NVVTIPEETWDRIXSVNVKGIFLCSKYVI 144
Query: 136 SGMVERGKGTIIFTGCSASLNGIA 159
                 G G+II T    + + IA
Sbjct: 145 PVXRRNGGGSIINTTSYTATSAIA 168

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G G  +G ++AR+ A EG  V     D       A +I         A R+D SD
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG----CGAAACRVDVSD 86
Query: 74  SRSVREAFEG-VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            + +    +  V + G V+ LV NA         +  + + + F + IAI+  GA+LC +
Sbjct: 87  EQQIIAMVDACVAAFGGVDKLVANAG---VVHLASLIDTTVEDFDRVIAINLRGAWLCTK 143
Query: 133 QVLSGMVERGKGTII 147
                M+ERG G I+
Sbjct: 144 HAAPRMIERGGGAIV 158

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +GR+IA +FA EG  +AI   DL      A+   R    +V  ++ D S 
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAI--ADLVPAPE-AEAAIRNLGRRVLTVKCDVSQ 65
Query: 74  SRSVREAF--EGVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
              V EAF  + + + G  ++LV NA   P+      F E++F+ ++K+  I+    FL 
Sbjct: 66  PGDV-EAFGKQVISTFGRCDILVNNAGIYPL----IPFDELTFEQWKKTFEINVDSGFLM 120
Query: 131 AQQVLSGMVERGKGTII 147
           A+  + GM   G G II
Sbjct: 121 AKAFVPGMKRNGWGRII 137

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAR---EEKSQVFAIRIDCSD 73
           I G    +G + A   A +GY VA+   +    S  ADE+ R   E   Q  A++ D + 
Sbjct: 30  ITGGSRGIGAASALLAARQGYAVAV---NYASNSAAADEVVRQIREAGGQALAVQADVAK 86
Query: 74  SRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            R V   FE V   LG +  LV NA   V  Q T    I+ +  Q+   I+  G+FLCA+
Sbjct: 87  EREVLAXFETVDAQLGRLSALVNNA--GVVDQTTRVDGITLERLQRXFEINVFGSFLCAR 144
Query: 133 QVL 135
           + +
Sbjct: 145 EAV 147

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVF-----AIR 68
           +A++ G    +G ++A  +A  G  VAI        S  ADE A E   + +     A +
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWYN-----SHPADEKA-EHLQKTYGVHSKAYK 89
Query: 69  IDCSDSRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEI---SFDSFQKSIAISS 124
            + SD +SV E   +     G ++V V NA   V+W  T   EI   ++DS+ K I++  
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANA--GVTW--TQGPEIDVDNYDSWNKIISVDL 145
Query: 125 LGAFLCAQQVLSGMVERGKGTIIFT 149
            G + C+  +     + GKG++I T
Sbjct: 146 NGVYYCSHNIGKIFKKNGKGSLIIT 170

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 33/163 (20%)
Query: 11  CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI---------AREEK 61
            +G   I G    +G + AR    +GY V ++ARD  RL   A E+          REE 
Sbjct: 4   MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEG 63
Query: 62  SQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQ 117
               A+        ++ EAF      G +  LV NA     +PV        E++ + ++
Sbjct: 64  DWARAV-------AAMEEAF------GELSALVNNAGVGVMKPVH-------ELTLEEWR 103
Query: 118 KSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             +  +  GAFL  +  +  ++ RG GTI+  G  A  N   G
Sbjct: 104 LVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG 146

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G   G  +A++FA  G  V I+ RD     R A EI         A+  D S 
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG----DAALAVAADISK 66
Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V  A E  LS  G V++LV NA   +  +P N   +  + F + + ++  G +L   
Sbjct: 67  EADVDAAVEAALSKFGKVDILVNNAG--IGHKPQNAELVEPEEFDRIVGVNVRGVYLMTS 124
Query: 133 QVLSGMVERG 142
           +++    E G
Sbjct: 125 KLIPHFKENG 134

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 16/136 (11%)
Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +G +IA++ A +G+ VA+  R  G                +F + +D +DS +V  AF  
Sbjct: 47  IGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVEVDVTDSDAVDRAFTA 94
Query: 84  VLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
           V    G VEVLV NA           TE   + F+K I  +  GAF  AQ+    M    
Sbjct: 95  VEEHQGPVEVLVSNAGLSADAFLMRMTE---EKFEKVINANLTGAFRVAQRASRSMQRNK 151
Query: 143 KGTIIFTGCSASLNGI 158
            G +IF    + L GI
Sbjct: 152 FGRMIFIASVSGLWGI 167

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 28  IARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS- 86
           IA+  + EGY+V I  R    L   A EI     + V A+  D  D   V   F  V + 
Sbjct: 49  IAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108
Query: 87  LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
              +++LV NA   V   P    E++F+ +   +A +  GAFLC Q 
Sbjct: 109 FARLDLLVNNAGSNVP--PVPLEEVTFEQWNGIVAANLTGAFLCTQH 153

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +GR IA  FA  G  VA+ AR    LS    E+       V  +R+D SD  S  +A   
Sbjct: 53  IGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART 112
Query: 84  VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
           V+ + G ++V+  NA     +       ++ +   + + ++  G     Q  L+ +   G
Sbjct: 113 VVDAFGALDVVCANAGI---FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG 169
Query: 143 KGTIIFT-GCSASLNGIAGFSE 163
           +G +I T   +  + G  G+S 
Sbjct: 170 RGRVILTSSITGPVTGYPGWSH 191

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 6   SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVF 65
           S   + + IA + G G  +GR++A   A  GY VA+  R L  L   A EI  +      
Sbjct: 22  SXSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD----AL 77
Query: 66  AIRIDCSDSRSVREAFEG-VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISS 124
            +  D +D  SVR  F   V   G V+VL  NA       P    +++F  +++ +  + 
Sbjct: 78  CVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXE--DLTFAQWKQVVDTNL 135
Query: 125 LGAFLCAQQ---VLSGMVERGKGTIIFTG 150
            G FLC Q+   V      RG G II  G
Sbjct: 136 TGPFLCTQEAFRVXKAQEPRG-GRIINNG 163

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 1/150 (0%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G     G +IA +F   G  VA L      L   A         +V  +R D +D
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63
Query: 74  SRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V  A    +   G ++VLV NA    + +         + F K +A++  G FL  +
Sbjct: 64  EGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCR 123
Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            VL  M+ +G G I+     ASL    G S
Sbjct: 124 AVLPHMLLQGAGVIVNIASVASLVAFPGRS 153

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           + +A + G G  +G++IA +   +G+ VAI   +       A EI  +      A+++D 
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI-NQAGGHAVAVKVDV 60
Query: 72  SDSRSVREAFEGV-LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           SD   V  A E    +LG  +V+V NA    S   T    I+ +   K   I+  G    
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS---TPIESITPEIVDKVYNINVKGVIWG 117
Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
            Q  +    + G G  I   CS +  G  G  EL 
Sbjct: 118 IQAAVEAFKKEGHGGKIINACSQA--GHVGNPELA 150

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV 84
           G   A + +  G+TVA          +  DE+  E  ++ +   I  S+   V E  E V
Sbjct: 14  GMGSALRLSEAGHTVACHDESF----KHQDEL--EAFAETYPQLIPMSEQEPV-ELIEAV 66
Query: 85  LS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK 143
            S LG V++LV N   PV W+P +  + + + ++  +    +  F  A  V S M  R  
Sbjct: 67  TSALGHVDILVSNDIAPVEWRPID--KYAVEDYRDMVEALQIKPFALANAVASQMKRRKS 124
Query: 144 GTIIFTGCSASL 155
           G IIF   +AS 
Sbjct: 125 GHIIFITSAASF 136

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 16/136 (11%)
Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +G +IA++ A +G+ VA+  R  G                +F +  D +DS +V  AF  
Sbjct: 27  IGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVECDVTDSDAVDRAFTA 74
Query: 84  VLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
           V    G VEVLV NA           TE   + F+K I  +  GAF  AQ+    M    
Sbjct: 75  VEEHQGPVEVLVSNAGLSADAFLMRMTE---EKFEKVINANLTGAFRVAQRASRSMQRNK 131
Query: 143 KGTIIFTGCSASLNGI 158
            G +IF G  +   GI
Sbjct: 132 FGRMIFIGSVSGSWGI 147

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    +GR+IA      GY VAI +R+        +E A+   +      ++  D 
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRN-------PEEAAQSLGAVPLPTDLEKDDP 57
Query: 75  RS-VREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           +  V+ A E   +LG + VLV+ A   V  +P    E+S++ +++ + +    AFL AQ 
Sbjct: 58  KGLVKRALE---ALGGLHVLVHAAAVNVR-KPA--LELSYEEWRRVLYLHLDVAFLLAQA 111
Query: 134 VLSGMVERGKGTIIFTG 150
               M E G G ++F G
Sbjct: 112 AAPHMAEAGWGRVLFIG 128

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ---VFAIRIDC 71
           A + G    +GRSIA + A EGY VA+   +       A+ +  E K++    FAI+ + 
Sbjct: 13  ALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQANV 69
Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +D+  V+   + V+S  G ++VLV NA            E  +D     I  +  G F C
Sbjct: 70  ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDV---IDTNLKGVFNC 126
Query: 131 AQQVLSGMVERGKGTII 147
            Q+    M+ +  G II
Sbjct: 127 IQKATPQMLRQRSGAII 143

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G G  +GR   +     G  V  + R    L   A E    E      + +D  D 
Sbjct: 10  ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIE-----PVCVDLGDW 64
Query: 75  RSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQV 134
            +  +A  G+   G V++LV NA   V  QP  F E++ ++F +S +++    F  +Q V
Sbjct: 65  DATEKALGGI---GPVDLLVNNAAL-VIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQMV 118
Query: 135 LSGMVERG-KGTII 147
              M+ RG  G+I+
Sbjct: 119 ARDMINRGVPGSIV 132

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           + G G N+G + A + A EG  +A+L  +   L + A+   RE+  +  +   D +   +
Sbjct: 12  VTGAGGNIGLATALRLAEEGTAIALLDMNREALEK-AEASVREKGVEARSYVCDVTSEEA 70
Query: 77  VREAFEGVL-SLGFVEVLVYNA-YQ----PVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           V    + V+   G ++ L  NA YQ    PV   P+       D F + + I+  GAF  
Sbjct: 71  VIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS-------DDFARVLTINVTGAFHV 123
Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNG 157
            + V   M+ +  G I+ T   A + G
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKG 150

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 14/126 (11%)
Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS 76
           I G    LG   AR+ A  G TV +  RD    +R  +  AR    QV    +D  D  S
Sbjct: 21  ITGANSGLGAVTARELARRGATVIMAVRD----TRKGEAAARTMAGQVEVRELDLQDLSS 76
Query: 77  VREAFEGVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           VR   +GV      +VL+ NA    V +       ++ D F+  I  + LG F     +L
Sbjct: 77  VRRFADGVSG---ADVLINNAGIMAVPY------ALTVDGFESQIGTNHLGHFALTNLLL 127
Query: 136 SGMVER 141
             + +R
Sbjct: 128 PRLTDR 133

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G G  +G+ IA  FA  G +V +   +    +   DEI ++   Q FA R D +  
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI-QQLGGQAFACRCDITSE 72
Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           + +    +  +S LG V++LV NA       P  F ++    F+++  ++    F  +Q 
Sbjct: 73  QELSALADFAISKLGKVDILVNNAG---GGGPKPF-DMPMADFRRAYELNVFSFFHLSQL 128
Query: 134 VLSGMVERGKGTIIFTGCSASLN 156
           V   M + G G I+     A+ N
Sbjct: 129 VAPEMEKNGGGVILTITSMAAEN 151

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 10  SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRI 69
           S + +  I G    +G +IAR+F+ EG+ + +LAR + RL                  ++
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------NLPNTLCAQV 66
Query: 70  DCSDSRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
           D +D  +   A      + G  + +V NA   +  Q         + +Q+   ++ LG  
Sbjct: 67  DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ---IDTQEANEWQRMFDVNVLGLL 123
Query: 129 LCAQQVLSGMVERGKGTII 147
              Q VL+ M  R  GTII
Sbjct: 124 NGMQAVLAPMKARNCGTII 142

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR+   EG  V + AR    L     E+    ++ V A    C D
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL---REAGVEADGRTC-D 83
Query: 74  SRSVREAFEGVLS-----LGFVEVLVYNAYQPVSWQPTNFT-EISFDSFQKSIAISSLGA 127
            RSV E  E +++      G V+VLV NA +P          E+  D  + ++     G 
Sbjct: 84  VRSVPE-IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT----GV 138
Query: 128 FLCAQQVLS--GMVERGKGTII---FTG----------CSASLNGIAGFSE 163
           F   +QVL   GM+ERG G I+    TG           SAS +G+ GF++
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTK 189

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR+   EG  V + AR    L     E+    ++ V A    C D
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL---REAGVEADGRTC-D 83
Query: 74  SRSVREAFEGVLS-----LGFVEVLVYNAYQPVSWQPTNFT-EISFDSFQKSIAISSLGA 127
            RSV E  E +++      G V+VLV NA +P          E+  D  + ++     G 
Sbjct: 84  VRSVPE-IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT----GV 138
Query: 128 FLCAQQVLS--GMVERGKGTII---FTG----------CSASLNGIAGFSE 163
           F   +QVL   GM+ERG G I+    TG           SAS +G+ GF++
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK 189

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR+   EG  V + AR    L     E+    ++ V A    C D
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL---REAGVEADGRTC-D 83
Query: 74  SRSVREAFEGVLS-----LGFVEVLVYNAYQPVSWQPTNFT-EISFDSFQKSIAISSLGA 127
            RSV E  E +++      G V+VLV NA +P          E+  D  + ++     G 
Sbjct: 84  VRSVPE-IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT----GV 138
Query: 128 FLCAQQVLS--GMVERGKGTII---FTG----------CSASLNGIAGFSE 163
           F   +QVL   GM+ERG G I+    TG           SAS +G+ GF++
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK 189

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR+   EG  V + AR    L     E+    ++ V A    C D
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL---REAGVEADGRTC-D 83
Query: 74  SRSVREAFEGVLS-----LGFVEVLVYNAYQPVSWQPTNFT-EISFDSFQKSIAISSLGA 127
            RSV E  E +++      G V+VLV NA +P          E+  D  + ++     G 
Sbjct: 84  VRSVPE-IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT----GV 138
Query: 128 FLCAQQVLS--GMVERGKGTII---FTG----------CSASLNGIAGFSE 163
           F   +QVL   GM+ERG G I+    TG           SAS +G+ GF++
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK 189

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR+   EG  V + AR    L     E+    ++ V A    C D
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL---REAGVEADGRTC-D 79
Query: 74  SRSVREAFEGVLS-----LGFVEVLVYNAYQPVSWQPTNFT-EISFDSFQKSIAISSLGA 127
            RSV E  E +++      G V+VLV NA +P          E+  D  + ++     G 
Sbjct: 80  VRSVPE-IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT----GV 134
Query: 128 FLCAQQVLS--GMVERGKGTII---FTG----------CSASLNGIAGFSE 163
           F   +QVL   GM+ERG G I+    TG           SAS +G+ GF++
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK 185

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +GR+ A  +  EG TVAI   D+ R  + A EI        +A++ D +  
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG----PAAYAVQXDVTRQ 66
Query: 75  RSVREAFEG-VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            S+  A    V   G +++LV NA     +      EI+ +S++K  AI+  G     Q 
Sbjct: 67  DSIDAAIAATVEHAGGLDILVNNA---ALFDLAPIVEITRESYEKLFAINVAGTLFTLQA 123
Query: 134 VLSGMVERGKGTIIFTGCS 152
                + +G+G  I    S
Sbjct: 124 AARQXIAQGRGGKIINXAS 142

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 30/171 (17%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR+   EG  V + AR    L     E+    ++ V A    C D
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL---REAGVEADGRTC-D 63
Query: 74  SRSVREAFEGVLS-----LGFVEVLVYNAYQPVSWQPTNFT-EISFDSFQKSIAISSLGA 127
            RSV E  E +++      G V+VLV NA +P          E+  D  + ++     G 
Sbjct: 64  VRSVPE-IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT----GV 118
Query: 128 FLCAQQVLS--GMVERGKGTII---FTG----------CSASLNGIAGFSE 163
           F   +QVL   GM+ERG G I+    TG           SAS +G+ GF++
Sbjct: 119 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK 169

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ---VFAIRIDC 71
           A + G    +GRSIA + A EGY VA+   +       A+ +  E K++    FAI+ + 
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQANV 63
Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +D+  V+   + V+S  G ++VLV NA            E  +D     I  +  G F C
Sbjct: 64  ADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDV---IDTNLKGVFNC 120
Query: 131 AQQVLSGMVERGKGTII 147
            Q+     + +  G II
Sbjct: 121 IQKATPQXLRQRSGAII 137

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 17  IVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
           I G G  LGR+ A + A EG  ++++     G  +  A  +     ++V     D SD  
Sbjct: 18  ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEA 77
Query: 76  SVREAFEGVLS--LGFVEVLVYNAYQPVSWQPT-NFTEISFDSFQKSIAISSLGAFLCAQ 132
            V EA+    +   G ++    NA       PT +FT   FD   K ++I+  G FL  +
Sbjct: 78  QV-EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFD---KVVSINLRGVFLGLE 133
Query: 133 QVLSGMVERGKGTIIFTGCSASLNGI 158
           +VL  M E+G G ++ T     + GI
Sbjct: 134 KVLKIMREQGSGMVVNTASVGGIRGI 159

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD-------------EIAREE 60
           +A I G     GR+ A + A +G    I+A DL R     D              +  E+
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGAD--IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ 105
Query: 61  KSQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISF-DSFQK 118
             ++ A + D  D  S++   +  L+  G +++LV N       +  + T+  + D  Q 
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT 165
Query: 119 SIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFSE 163
           ++    +GA+   + VL  M+ERG+ G++IF   +  L G  G S 
Sbjct: 166 NL----IGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSH 207

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 29  ARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV-LSL 87
           A +FA EG  V I  R   +L     EI  +   Q+  ++ D  ++  +++  E +    
Sbjct: 23  ATRFAKEGARVVITGRTKEKLEEAKLEI-EQFPGQILTVQXDVRNTDDIQKXIEQIDEKF 81
Query: 88  GFVEVLVYNAYQPVSWQPTNF----TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG- 142
           G +++L+ NA         NF     ++S + +   I I   G F C+Q +    +E+G 
Sbjct: 82  GRIDILINNA-------AGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI 134
Query: 143 KGTII 147
           KG II
Sbjct: 135 KGNII 139

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A I G    +GR+ A  +  EG  VAI   +L      A EI         AI +D +D 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG----PAACAIALDVTDQ 63
Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            S+      +L   G +++LV NA     +      EI+ +S+ +  AI+  G     Q 
Sbjct: 64  ASIDRCVAELLDRWGSIDILVNNA---ALFDLAPIVEITRESYDRLFAINVSGTLFMMQA 120
Query: 134 VLSGMVERGKGTIIFTGCS 152
           V   M+  G+G  I    S
Sbjct: 121 VARAMIAGGRGGKIINMAS 139

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 14  IAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           IA + G    +G SI ++   +G+  VA    +  R  ++ ++  +      +A   +  
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLED-QKALGFDFYASEGNVG 73
Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D  S ++AF+ V + +G ++VLV NA      +   F +++ + +Q  I  +    F   
Sbjct: 74  DWDSTKQAFDKVKAEVGEIDVLVNNAGIT---RDVVFRKMTREDWQAVIDTNLTSLFNVT 130
Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           +QV+ GMVERG G II     +S+NG  G
Sbjct: 131 KQVIDGMVERGWGRIINI---SSVNGQKG 156

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-47
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-24
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-24
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-23
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-22
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-22
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-22
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	5e-22
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-21
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-21
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-21
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	6e-21
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	8e-21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-20
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-20
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-20
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-20
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-20
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	4e-20
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-20
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-19
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-19
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-19
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-19
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-19
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-19
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-19
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-19
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-19
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-19
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-19
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-19
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-19
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-19
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	5e-19
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-19
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	5e-19
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-19
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-19
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	7e-19
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-19
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	9e-19
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-18
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-18
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-18
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-18
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-18
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-18
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-18
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	5e-18
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-18
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	7e-18
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	8e-18
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	9e-18
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-17
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-17
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-17
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-17
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-17
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-17
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-17
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	5e-17
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-17
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-17
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	6e-17
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	8e-17
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-17
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-17
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	9e-17
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-16
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-16
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-16
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-16
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-16
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-16
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-16
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-16
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-16
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-16
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	6e-16
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-16
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-16
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	8e-16
1spx_A	278	Short-chain reductase family member (5L265); paral	9e-16
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-15
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-15
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-15
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-15
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-15
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-15
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-15
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-15
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-15
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-15
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-15
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	5e-15
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	6e-15
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	7e-15
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-15
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	7e-15
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-15
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	9e-15
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-14
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-14
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-14
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-14
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-14
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-14
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-14
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-14
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-14
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-14
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-14
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-14
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-14
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-14
4e4y_A	244	Short chain dehydrogenase family protein; structur	7e-14
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	8e-14
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-14
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-13
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-13
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-13
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-13
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-13
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-13
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-13
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-13
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-13
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-13
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	4e-13
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-13
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	8e-13
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	9e-13
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-12
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-12
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-12
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-12
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-12
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-12
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-12
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	4e-12
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-12
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	5e-12
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-12
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	6e-12
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-12
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-12
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-12
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	9e-12
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	9e-12
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-11
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-11
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-11
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-11
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-11
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-11
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-11
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-11
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-11
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	6e-11
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	7e-11
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-10
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-10
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-10
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-10
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-10
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-10
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-10
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-10
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-10
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-10
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-09
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-09
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-09
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	8e-07
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-08
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-08
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-08
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	9e-08
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-07
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-07
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	7e-07
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	8e-07
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	9e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-06
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-06
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-06
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-05
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	2e-05
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	4e-05
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	6e-05
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	8e-05
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	8e-05
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	3e-04
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	5e-04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	5e-04
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	6e-04

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  153 bits (388), Expect = 3e-47
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
             A++G G  +G  IA+KFA EG+TV    R+  +L+    EI      ++ A  +D  +
Sbjct: 9   TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEI-EAAGGRIVARSLDARN 67

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
              V        +   +EV ++N             E +   F+K   ++    F+  ++
Sbjct: 68  EDEVTAFLNAADAHAPLEVTIFNVGA---NVNFPILETTDRVFRKVWEMACWAGFVSGRE 124

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGFS 162
               M+  G+G I FTG +ASL G +GF+
Sbjct: 125 SARLMLAHGQGKIFFTGATASLRGGSGFA 153

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 94.1 bits (235), Expect = 3e-24
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFE 82
           LG + A + A  G  + + +R+  +L   A  IA     +QV  +  D  +   +   FE
Sbjct: 19  LGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFE 78

Query: 83  GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
               LG  ++LVY+   P   +P  F E+  + + +S  + +  A    ++    MVE+G
Sbjct: 79  KARDLGGADILVYSTGGP---RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG 135

Query: 143 KGTIIFTGCSASLNGIAG 160
            G +++ G    L     
Sbjct: 136 WGRMVYIGSVTLLRPWQD 153

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 93.8 bits (234), Expect = 3e-24
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           GSS  GI          G +IA  FA EG  + ++AR + RL   A  +  +   +V  +
Sbjct: 14  GSS-SGI----------GLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEV 62

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
            +D +    V    E V S  G  ++LV NA            E + + +Q    +  + 
Sbjct: 63  AVDVATPEGVDAVVESVRSSFGGADILVNNAGTG---SNETIMEAADEKWQFYWELLVMA 119

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           A   A+ ++ GM  RG G II      ++  +  
Sbjct: 120 AVRLARGLVPGMRARGGGAIIHNASICAVQPLWY 153

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 91.1 bits (227), Expect = 4e-23
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 5/139 (3%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFE 82
           +G +        G  VA  ARD  RL      + +    +++FA   D  D+  VR   E
Sbjct: 20  IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAE 79

Query: 83  GVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER 141
                LG   +LV NA Q    + + F E + +++ + + +         +  L  +  R
Sbjct: 80  ACERTLGCASILVNNAGQG---RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR 136

Query: 142 GKGTIIFTGCSASLNGIAG 160
               I+      +      
Sbjct: 137 ADAAIVCVNSLLASQPEPH 155

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 90.0 bits (224), Expect = 1e-22
 Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 6/161 (3%)

Query: 4   MTSSGSSCRGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS 62
           M     S  G  A+V G G  +GR IA+  + EGY+V I  R    L   A EI     +
Sbjct: 24  MAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN 83

Query: 63  QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIA 121
            V A+  D  D   V   F  V +    +++LV NA    +  P    E++F+ +   +A
Sbjct: 84  IVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNA--GSNVPPVPLEEVTFEQWNGIVA 141

Query: 122 ISSLGAFLCAQQVLSGMVERGK--GTIIFTGCSASLNGIAG 160
            +  GAFLC Q     M  +    G II  G  ++      
Sbjct: 142 ANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN 182

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 89.5 bits (223), Expect = 1e-22
 Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 6/149 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            ++ GVGP LG ++AR+ A +G  + + AR + RL   A ++  +   +  ++  D +D 
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQV-TDTGRRALSVGTDITDD 72

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             V    +  +   G V+V++ NA++  S +P  F   +F+  + +I ++  GA    Q 
Sbjct: 73  AQVAHLVDETMKAYGRVDVVINNAFRVPSMKP--FANTTFEHMRDAIELTVFGALRLIQG 130

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGFS 162
               + E   G ++        +  A + 
Sbjct: 131 FTPALEESK-GAVVNVNSMVVRHSQAKYG 158

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 89.1 bits (222), Expect = 2e-22
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 7/148 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G   N+G +     A  G  V I   D    ++  +++ R E   V ++ +D ++
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDL-RMEGHDVSSVVMDVTN 73

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           + SV+ A   V    G V++LV  A   +        +++   + K + I+  G F   Q
Sbjct: 74  TESVQNAVRSVHEQEGRVDILVACA--GICISEVKAEDMTDGQWLKQVDINLNGMFRSCQ 131

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAG 160
            V   M+E+ +G I+      S++G+  
Sbjct: 132 AVGRIMLEQKQGVIVAI---GSMSGLIV 156

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 88.5 bits (220), Expect = 5e-22
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 5/153 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  I G G  +GR  A +FA     + +   +   L   A +  +   ++V    +DCS+
Sbjct: 33  IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC-KGLGAKVHTFVVDCSN 91

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              +  + + V + +G V +LV NA   V    ++         +K+  ++ L  F   +
Sbjct: 92  REDIYSSAKKVKAEIGDVSILVNNA--GVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTK 148

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
             L  M +   G I+    +A    +      C
Sbjct: 149 AFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC 181

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 86.5 bits (215), Expect = 3e-21
 Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 12/152 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  +G  IA  F   G    I +R L R+   A ++A     +   + +D   
Sbjct: 29  VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA 88

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNF----TEISFDSFQKSIAISSLGAF 128
             +V  A +  L   G +++L+  A         NF      +SF++F+  + I + G F
Sbjct: 89  PPAVMAAVDQALKEFGRIDILINCA-------AGNFLCPAGALSFNAFKTVMDIDTSGTF 141

Query: 129 LCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             ++ +         G I+    +    G A 
Sbjct: 142 NVSRVLYEKFFRDHGGVIVNITATLGNRGQAL 173

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 85.6 bits (213), Expect = 3e-21
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 5/148 (3%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AIV G     G +IA +F   G  VA L      L   A         +V  +R D +D 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             V  A    +   G ++VLV NA    + +         + F K +A++  G FL  + 
Sbjct: 65  GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRA 124

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGF 161
           VL  M+ +G G I+     AS+  +  F
Sbjct: 125 VLPHMLLQGAGVIVNI---ASVASLVAF 149

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 86.1 bits (214), Expect = 3e-21
 Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            +V G G N+G + A + A EG  +A+L  +   L +    + RE+  +  +   D +  
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV-REKGVEARSYVCDVTSE 68

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            +V    + V+   G ++ L  NA            +   D F + + I+  GAF   + 
Sbjct: 69  EAVIGTVDSVVRDFGKIDFLFNNA--GYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 126

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGF 161
           V   M+ +  G I+ T   AS+ G+ G 
Sbjct: 127 VSRQMITQNYGRIVNT---ASMAGVKGP 151

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 85.3 bits (212), Expect = 6e-21
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 8/148 (5%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A++ G G  +GR+ A   A +G TV  L R    +   ADEI      Q  A+  D SD 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI-VGAGGQAIALEADVSDE 89

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             +R A   ++   G ++++V NA   ++       ++    + ++IA++  G FL    
Sbjct: 90  LQMRNAVRDLVLKFGHLDIVVANA--GINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHL 147

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGF 161
            +  + +RG G I+     +S+NG   F
Sbjct: 148 TVPYLKQRGGGAIVVV---SSINGTRTF 172

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 84.5 bits (210), Expect = 8e-21
 Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 6/147 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            IV G G  +G++ A   A EG  V +   +       A +I   +     ++ +D SD 
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI-VADGGTAISVAVDVSDP 70

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            S +   +  L+  G ++ LV NA      +      I  + ++K ++++  GA  C + 
Sbjct: 71  ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRA 130

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAG 160
           V   M +RG G I+     +S      
Sbjct: 131 VYKKMTKRGGGAIV---NQSSTAAWLY 154

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 84.1 bits (209), Expect = 1e-20
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AI+ G G  +G+ IA  FA  G +V +   +    +   DEI ++   Q FA R D +  
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI-QQLGGQAFACRCDITSE 72

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           + +    +  +S LG V++LV NA            ++    F+++  ++    F  +Q 
Sbjct: 73  QELSALADFAISKLGKVDILVNNA----GGGGPKPFDMPMADFRRAYELNVFSFFHLSQL 128

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAG 160
           V   M + G G I+     A+ N    
Sbjct: 129 VAPEMEKNGGGVILTITSMAAENKNIN 155

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 83.7 bits (208), Expect = 2e-20
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 11/149 (7%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A++ G    +G  IAR FA  G  + +  RD+  L      +  +  + V  + ID ++ 
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEP 82

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            +  E         G ++VLV NA        P    +     F  +IA++     L A 
Sbjct: 83  DAPAELARRAAEAFGGLDVLVNNAGISH----PQPVVDTDPQLFDATIAVNLRAPALLAS 138

Query: 133 QVLSGMVERGK-GTIIFTGCSASLNGIAG 160
            V   MV  G+ G II     AS   +A 
Sbjct: 139 AVGKAMVAAGEGGAIITV---ASAAALAP 164

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 83.3 bits (207), Expect = 2e-20
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 8/148 (5%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            IV G G  +GR+IA+KFA     V  +     RL++   E+ R    +V  ++ D S  
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL-RGMGKEVLGVKADVSKK 68

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           + V E           ++VL  NA   +    T   E+S + +++ +A++   AF  ++ 
Sbjct: 69  KDVEEFVRRTFETYSRIDVLCNNA--GIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRA 126

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGF 161
           V+  M+++GKG I+ T   AS+ GI G 
Sbjct: 127 VIPIMLKQGKGVIVNT---ASIAGIRGG 151

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 82.9 bits (206), Expect = 3e-20
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 18/150 (12%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A V G G  +G  I R FA  G  + ++ R+   L R A E+          I  D +D+
Sbjct: 14  AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAV---AARIVADVTDA 70

Query: 75  RSVREAFEGVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
            ++  A     ++  V +LV +A                E    ++++ +A++  G F  
Sbjct: 71  EAMTAAAAEAEAVAPVSILVNSAGIARLHD-------ALETDDATWRQVMAVNVDGMFWA 123

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           ++     MV RG G I+      S++G   
Sbjct: 124 SRAFGRAMVARGAGAIVNL---GSMSGTIV 150

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 82.6 bits (205), Expect = 4e-20
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G G  LGR++       G+ V+++ R   RL +    +       V  I  D + 
Sbjct: 5   HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN----AVIGIVADLAH 60

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
              V  AF   +   G  E++++ A               + +  ++ +  + +   L A
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVLHCAGTGEFG----PVGVYTAEQIRRVMESNLVSTILVA 116

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           QQ +  + ERG G +     SA+  G A  S
Sbjct: 117 QQTVRLIGERG-GVLANVLSSAAQVGKANES 146

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 83.4 bits (207), Expect = 4e-20
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 14/152 (9%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G G  LG+ +    +  G    I +R +  L   A++I+ +  ++V AI+ D  D 
Sbjct: 29  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 88

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNF----TEISFDSFQKSIAISSLGAFL 129
             V+     ++   G   +++ NA         NF      +S ++++    I   G   
Sbjct: 89  DMVQNTVSELIKVAGHPNIVINNA-------AGNFISPTERLSPNAWKTITDIVLNGTAF 141

Query: 130 CAQQVLSGMVERGK-GTIIFTGCSASLNGIAG 160
              ++   +++  K    +      +  G   
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGF 173

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 83.0 bits (206), Expect = 5e-20
 Identities = 27/151 (17%), Positives = 60/151 (39%), Gaps = 6/151 (3%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI--AREEKSQVFAIRIDCS 72
            +V G G  +G+ +A      G +V I+ R+  +L+    E+         +     D +
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           +      A + V +  G +  +V+ A    S      T++  +++++++ ++  G     
Sbjct: 74  NEDETARAVDAVTAWHGRLHGVVHCA--GGSENIGPITQVDSEAWRRTVDLNVNGTMYVL 131

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +     MV  G G+ +     A+ N    F 
Sbjct: 132 KHAAREMVRGGGGSFVGISSIAASNTHRWFG 162

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 81.8 bits (203), Expect = 1e-19
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 13/152 (8%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A++ G    +GR+ A  +  EG TVAI   D+ R  + A EI        +A+++D +  
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA----AYAVQMDVTRQ 66

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            S+  A    +   G +++LV NA   +        EI+ +S++K  AI+  G     Q 
Sbjct: 67  DSIDAAIAATVEHAGGLDILVNNA--ALF-DLAPIVEITRESYEKLFAINVAGTLFTLQA 123

Query: 134 VLSGMVERGK-GTIIFTGCSASLNGIAGFSEL 164
               M+ +G+ G II     AS  G  G + +
Sbjct: 124 AARQMIAQGRGGKIINM---ASQAGRRGEALV 152

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 81.9 bits (203), Expect = 1e-19
 Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 21/157 (13%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFA 66
           GS+  GI          G +IAR  A  G  + +        +    DE+A      V  
Sbjct: 32  GST-SGI----------GLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISS 124
              D +    + +    V    G  ++LV NA  Q V        +   + + + IA++ 
Sbjct: 81  HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVE----KIEDFPVEQWDRIIAVNL 136

Query: 125 LGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
             +F   +  +  M ++G G II     AS +G+   
Sbjct: 137 SSSFHTIRGAIPPMKKKGWGRIINI---ASAHGLVAS 170

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 81.8 bits (203), Expect = 2e-19
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 5/151 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           IA + G    +GR+ A  FA EG  V + AR+   L+   DEI      +  A+  D  D
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEI-AGGGGEAAALAGDVGD 68

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
                   E  +   G ++    NA           + +S + +++++  +   AFL A+
Sbjct: 69  EALHEALVELAVRRFGGLDTAFNNA--GALGAMGEISSLSVEGWRETLDTNLTSAFLAAK 126

Query: 133 QVLSGMVERGKGTIIFTG-CSASLNGIAGFS 162
             +  +   G G++ FT        G AG +
Sbjct: 127 YQVPAIAALGGGSLTFTSSFVGHTAGFAGVA 157

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 81.5 bits (202), Expect = 2e-19
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 21/158 (13%)

Query: 7   SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR---DLGRLSRFADEIAREEKS- 62
           +G+S RGI          G +IA + A +G  VAI A+      +L       A    + 
Sbjct: 12  TGAS-RGI----------GLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA 60

Query: 63  --QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKS 119
             Q  A++ D  +   VR A    +   G +++LV NA    +       +     F   
Sbjct: 61  GGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNAS---AIWLRGTLDTPMKRFDLM 117

Query: 120 IAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG 157
             +++ G+F+CAQ  L  +++     I+      SLN 
Sbjct: 118 QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNP 155

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 81.0 bits (201), Expect = 2e-19
 Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+V G G  +G++IA +   +G+ VAI   +       A EI  +      A+++D SD 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI-NQAGGHAVAVKVDVSDR 63

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             V  A E     LG  +V+V NA   V+   T    I+ +   K   I+  G     Q 
Sbjct: 64  DQVFAAVEQARKTLGGFDVIVNNA--GVA-PSTPIESITPEIVDKVYNINVKGVIWGIQA 120

Query: 134 VLSGMVERGK-GTIIFTGCSASLNGIAGFSEL 164
            +    + G  G II      S  G  G  EL
Sbjct: 121 AVEAFKKEGHGGKIINA---CSQAGHVGNPEL 149

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 80.6 bits (200), Expect = 2e-19
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 7/140 (5%)

Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV 84
           G +IAR  A +GY +A+ AR + RL + A E+ +E+  +VF   +D S + SV E  + V
Sbjct: 15  GEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKV 74

Query: 85  LS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
           L   G V+V+V NA             E+S + F + I ++ LG +   +  L  +   G
Sbjct: 75  LERFGDVDVVVANAGLGYFK----RLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG 130

Query: 143 KGTIIFTGCSASLNGIAGFS 162
              ++ T    S   I    
Sbjct: 131 GLALVTTS-DVSARLIPYGG 149

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 81.4 bits (202), Expect = 2e-19
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 13/150 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  + G G  +GR+ A  FA  G  V +   +     R A+EI  +     F +R+D S 
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK----AFGVRVDVSS 84

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           ++      E   +  G V+VLV NA +        N   I  +++ + ++++  G FLC+
Sbjct: 85  AKDAESMVEKTTAKWGRVDVLVNNAGFGT----TGNVVTIPEETWDRIMSVNVKGIFLCS 140

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           + V+  M   G G+II T    S    +  
Sbjct: 141 KYVIPVMRRNGGGSIINT---TSYTATSAI 167

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 80.6 bits (200), Expect = 2e-19
 Identities = 30/150 (20%), Positives = 65/150 (43%), Gaps = 5/150 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDC 71
           +  + G    +G + AR +A  G +V +L R    L+  +D+I      +  + A+ ++ 
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN 75

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           + ++  RE    V    G ++ L++NA   +    T   ++  + F + + ++    F+ 
Sbjct: 76  ATAQQYRELAARVEHEFGRLDGLLHNA--SIIGPRTPLEQLPDEDFMQVMHVNVNATFML 133

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            + +L  +      +I FT  S    G A 
Sbjct: 134 TRALLPLLKRSEDASIAFTSSSVGRKGRAN 163

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 81.0 bits (201), Expect = 3e-19
 Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 7/150 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCS 72
           +  I G G  LGR+ A + A EG  ++++      L      +      ++V     D S
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D   V           G ++    NA   +  +       +   F K ++I+  G FL  
Sbjct: 75  DEAQVEAYVTATTERFGRIDGFFNNA--GIEGKQNPTESFTAAEFDKVVSINLRGVFLGL 132

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           ++VL  M E+G G ++ T   AS+ GI G 
Sbjct: 133 EKVLKIMREQGSGMVVNT---ASVGGIRGI 159

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 80.3 bits (199), Expect = 3e-19
 Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 24/165 (14%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
           M  M        G   I G    +G + AR    +GY V ++ARD  RL   A E+    
Sbjct: 1   MEGMK-------GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---- 49

Query: 61  KSQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDS 115
                 +  D  +      A   +    G +  LV NA     +PV        E++ + 
Sbjct: 50  -EGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVH-------ELTLEE 101

Query: 116 FQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           ++  +  +  GAFL  +  +  ++ RG GTI+  G  A  N   G
Sbjct: 102 WRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG 146

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 80.2 bits (199), Expect = 3e-19
 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 5/150 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC-- 71
           I  + G    +GR  A  +A  G TV +L R+  +L + A  I  E   Q     +D   
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
             S + ++  + +      ++ +++NA       P   +E +   +Q  + ++    F+ 
Sbjct: 74  CTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP--MSEQNPQVWQDVMQVNVNATFML 131

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            Q +L  +++   G+++FT  S    G A 
Sbjct: 132 TQALLPLLLKSDAGSLVFTSSSVGRQGRAN 161

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 80.3 bits (199), Expect = 4e-19
 Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 18/155 (11%)

Query: 7   SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVF 65
           +GS+  GI          G++IA     EG  V I  R    ++    EI  +   + + 
Sbjct: 16  TGST-AGI----------GKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQ 64

Query: 66  AIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
            +  D    +  ++  E       V++L+ N       +P  + +I  + + K   ++ +
Sbjct: 65  PVVADLGTEQGCQDVIE---KYPKVDILINNLGIF---EPVEYFDIPDEDWFKLFEVNIM 118

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
                 +  L  M+ER +G +IF    A++     
Sbjct: 119 SGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE 153

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 80.3 bits (199), Expect = 4e-19
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A++ G G   G  +A++FA  G  V I+ RD     R A EI         A+  D S  
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA----ALAVAADISKE 67

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             V  A E  LS  G V++LV NA   +  +P N   +  + F + + ++  G +L   +
Sbjct: 68  ADVDAAVEAALSKFGKVDILVNNA--GIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSK 125

Query: 134 VLSGMVERGKG----TIIFTGCSASLNGIAGFS 162
           ++    E G       I+    + +       +
Sbjct: 126 LIPHFKENGAKGQECVILNVASTGAGRPRPNLA 158

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 79.9 bits (198), Expect = 5e-19
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 9/151 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDC 71
           +A I G    +G  IA   A +GY V ++AR    L +  DEI R      +   + +D 
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
           +D        + +    G V++LV  A                 D+F+K + I+ +  + 
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL-----SEPVDNFRKIMEINVIAQYG 123

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             + V   M  +  G I      A+  G A 
Sbjct: 124 ILKTVTEIMKVQKNGYIFNVASRAAKYGFAD 154

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 80.4 bits (199), Expect = 5e-19
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 9/152 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           IA + G G  +GR++A   A  GY VA+  R L  L   A EI  +       +  D +D
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD----ALCVPTDVTD 85

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             SVR  F   +   G V+VL  NA            +++F  +++ +  +  G FLC Q
Sbjct: 86  PDSVRALFTATVEKFGRVDVLFNNA--GTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQ 143

Query: 133 QVLSGMVERGK--GTIIFTGCSASLNGIAGFS 162
           +    M  +    G II  G  ++ +     +
Sbjct: 144 EAFRVMKAQEPRGGRIINNGSISATSPRPYSA 175

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 80.3 bits (199), Expect = 5e-19
 Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 7/147 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A V G    +G ++A  +A  G  VAI         + A+ + +       A + + SD 
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK-AEHLQKTYGVHSKAYKCNISDP 95

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           +SV E         G ++V V NA    +  P      ++DS+ K I++   G + C+  
Sbjct: 96  KSVEETISQQEKDFGTIDVFVANAGVTWTQGPE-IDVDNYDSWNKIISVDLNGVYYCSHN 154

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAG 160
           +     + GKG++I T   +S++G   
Sbjct: 155 IGKIFKKNGKGSLIIT---SSISGKIV 178

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 79.9 bits (198), Expect = 5e-19
 Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 15/150 (10%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AIV G    +G +IAR     G TVAI   D+      A  +    ++  FA+ +D +  
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMA----AQAVVAGLENGGFAVEVDVTKR 70

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTN-FTEISFDSFQKSIAISSLGAFLCAQ 132
            SV  A +  +  LG  ++L  NA             +I+ + +  +  +++ G FL  Q
Sbjct: 71  ASVDAAMQKAIDALGGFDLLCANA----GVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126

Query: 133 QVLSGMVERGK-GTIIFTGCSASLNGIAGF 161
                 +     G I+ T   ASL    G 
Sbjct: 127 IACRHFLASNTKGVIVNT---ASLAAKVGA 153

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 79.9 bits (198), Expect = 6e-19
 Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 10/148 (6%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AI+ G    +G   +R  A  G  V +       L+  A  + R          +D ++ 
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRG----AVHHVVDLTNE 69

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            SVR   +  +   G ++++  NA           T+++ D +  +  +++ G  L  + 
Sbjct: 70  VSVRALIDFTIDTFGRLDIVDNNAAH-SDPADMLVTQMTVDVWDDTFTVNARGTMLMCKY 128

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGF 161
            +  ++  G G I+     +S    A +
Sbjct: 129 AIPRLISAGGGAIVNI---SSATAHAAY 153

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 79.9 bits (198), Expect = 6e-19
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 10/148 (6%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A++ G    +G+ +A  +A  G  VA+ AR    L   ADEI      +   IR D +  
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI-AGVGGKALPIRCDVTQP 93

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             VR   + +   LG +++ V NA   +        ++  + FQ+    +  G FL AQ 
Sbjct: 94  DQVRGMLDQMTGELGGIDIAVCNA--GIVSV-QAMLDMPLEEFQRIQDTNVTGVFLTAQA 150

Query: 134 VLSGMVERGK-GTIIFTGCSASLNGIAG 160
               MV++G  GTII T   AS++G   
Sbjct: 151 AARAMVDQGLGGTIITT---ASMSGHII 175

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 80.4 bits (199), Expect = 7e-19
 Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 17/142 (11%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS----QVFAIRID 70
           AIV G    +G++I ++    G  V I +R L RL   ADE+          +V  I+ +
Sbjct: 21  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80

Query: 71  CSDSRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSL 125
             +   V    +  L   G +  LV N       P          IS   +   +  +  
Sbjct: 81  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP-------AEHISSKGWHAVLETNLT 133

Query: 126 GAFLCAQQVLSGMVERGKGTII 147
           G F   + V S  ++   G+I+
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIV 155

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 79.9 bits (198), Expect = 7e-19
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AIV G G  +G ++AR+ A EG  V     D       A +I         A R+D SD 
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCG----AAACRVDVSDE 87

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           + +    +  ++  G V+ LV NA   V     +  + + + F + IAI+  GA+LC + 
Sbjct: 88  QQIIAMVDACVAAFGGVDKLVANA--GVV-HLASLIDTTVEDFDRVIAINLRGAWLCTKH 144

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGF 161
               M+ERG G I+     +SL G    
Sbjct: 145 AAPRMIERGGGAIVNL---SSLAGQVAV 169

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 79.2 bits (196), Expect = 9e-19
 Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 21/157 (13%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G+S RGI          GR IA +    G TV I  R L  L   A E  +    Q   +
Sbjct: 12  GAS-RGI----------GRGIALQLCKAGATVYITGRHLDTLRVVAQEA-QSLGGQCVPV 59

Query: 68  RIDCSDSRSVREAFEGVLS--LGFVEVLVYNAY----QPVSWQPTNFTEISFDSFQKSIA 121
             D S    VR  FE V     G ++VLV NAY      ++ +   F E     +     
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI 158
           +   G + C+      MV  G+G I+     +S   +
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVI---SSPGSL 153

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 79.1 bits (196), Expect = 1e-18
 Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 18/155 (11%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
            ++  GI          G + AR+   EG  V I      RL    D++A     +V A+
Sbjct: 29  AAAGTGI----------GSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
             D + + +V       +   G ++VLV NA        T   +++ + + + + ++   
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG---GQTPVVDMTDEEWDRVLNVTLTS 135

Query: 127 AFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAG 160
                +  L         G I+     AS+ G   
Sbjct: 136 VMRATRAALRYFRGVDHGGVIVNN---ASVLGWRA 167

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 79.2 bits (196), Expect = 1e-18
 Identities = 38/159 (23%), Positives = 58/159 (36%), Gaps = 23/159 (14%)

Query: 7   SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-------GRLSRFADEIARE 59
           SG S RGI          G +IA++ A +G  VA++A+         G +   A EI  E
Sbjct: 15  SGGS-RGI----------GLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEI-EE 62

Query: 60  EKSQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQK 118
              Q   I  D  D  +V  A    +   G +++ V NA    +    +  E+    F  
Sbjct: 63  AGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNA---SAINLGSIEEVPLKRFDL 119

Query: 119 SIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG 157
              I   G +  +Q  +  M  R    I+       L  
Sbjct: 120 MNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP 158

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 23/155 (14%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G +  GI          GR+IA +FA EG  +AI           A+   R    +V  +
Sbjct: 14  GGA-NGI----------GRAIAERFAVEGADIAIADLVPAPE---AEAAIRNLGRRVLTV 59

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTN-FTEISFDSFQKSIAISSL 125
           + D S    V    + V+S  G  ++LV NA       P   F E++F+ ++K+  I+  
Sbjct: 60  KCDVSQPGDVEAFGKQVISTFGRCDILVNNA----GIYPLIPFDELTFEQWKKTFEINVD 115

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             FL A+  + GM   G G II      S      
Sbjct: 116 SGFLMAKAFVPGMKRNGWGRIINL---TSTTYWLK 147

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 78.4 bits (194), Expect = 2e-18
 Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 21/157 (13%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFA 66
           GS+  GI          G  IA   A +G  + +    D   + +    +A +   +V  
Sbjct: 11  GST-SGI----------GLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLY 59

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISS 124
              D S   +VR   +  +  +G +++LV NA  Q  +       +   + +   +A++ 
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA----LIEDFPTEKWDAILALNL 115

Query: 125 LGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
              F      L  M ++G G II     AS +G+   
Sbjct: 116 SAVFHGTAAALPHMKKQGFGRIINI---ASAHGLVAS 149

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 78.5 bits (194), Expect = 2e-18
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 18/162 (11%)

Query: 2   RNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK 61
             +   GS       ++G    LG  + + F  + +    +               RE  
Sbjct: 12  SGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDF-------------RENP 58

Query: 62  SQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSI 120
           +   +  I  S    ++   E + S    V+  V  A           ++    S +  I
Sbjct: 59  NADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA--GGWSGGNASSDEFLKSVKGMI 116

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            ++   AF  A       +    G  + TG SA+LN  +G  
Sbjct: 117 DMNLYSAFASAHIGA--KLLNQGGLFVLTGASAALNRTSGMI 156

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 77.9 bits (193), Expect = 3e-18
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 28/160 (17%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
            S+  GI          G +IAR+ A +G  V + +R    + R    + + E   V   
Sbjct: 21  AST-DGI----------GLAIARRLAQDGAHVVVSSRKQENVDRTVATL-QGEGLSVTGT 68

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-----YQPVSWQPTNFTEISFDSFQKSIA 121
                 +          ++  G V++LV NA     +  +        + + + + K + 
Sbjct: 69  VCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNI-------IDATEEVWDKILH 121

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           ++     L  + V+  M +RG G+++     +S+     F
Sbjct: 122 VNVKATVLMTKAVVPEMEKRGGGSVLIV---SSVGAYHPF 158

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 77.9 bits (193), Expect = 3e-18
 Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 7/147 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AIV G    +GR+IA  FA  G +V +           A  I R+   +   +  + +D 
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAI-RQAGGKAIGLECNVTDE 73

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           +      +  L   G + VLV NA            ++    F+ +  ++    F  +Q 
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNA----GGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQL 129

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAG 160
               M + G G I+     A  N    
Sbjct: 130 AAPHMQKAGGGAILNISSMAGENTNVR 156

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 77.2 bits (191), Expect = 5e-18
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 22/158 (13%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRFADEIAREEKSQVF 65
           G + +GI          GR I+ K A +G+ +A+  L +   + +     I      +  
Sbjct: 9   GGA-QGI----------GRGISEKLAADGFDIAVADLPQQEEQAAETIKLI-EAADQKAV 56

Query: 66  AIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISS 124
            + +D +D  +   A +     LG  +VLV NA   ++ Q     E++ +  ++  +++ 
Sbjct: 57  FVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNA--GIA-QIKPLLEVTEEDLKQIYSVNV 113

Query: 125 LGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGF 161
              F   Q       E G KG II     AS+  I GF
Sbjct: 114 FSVFFGIQAASRKFDELGVKGKIINA---ASIAAIQGF 148

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 78.3 bits (193), Expect = 6e-18
 Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 13/155 (8%)

Query: 2   RNMTSSGSSCRGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARD-------LGRLSRFA 53
             M  +     G    + G    +G++IA K A +G  + I A+        LG +   A
Sbjct: 34  SAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAA 93

Query: 54  DEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEIS 112
           +EI      +     +D  D + +  A E  +   G +++LV NA    +   TN  +  
Sbjct: 94  EEI-EAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNA---SAISLTNTLDTP 149

Query: 113 FDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTII 147
                  + +++ G +L ++  +  + +     I+
Sbjct: 150 TKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHIL 184

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 77.3 bits (191), Expect = 7e-18
 Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 8/152 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    LGR++  +F  EG  VA+L +   R      E+          +  D   
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKSAER----LRELEVAHGGNAVGVVGDVRS 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
            +  + A E  L+  G ++ L+ NA  +   +       +    +F     ++  G    
Sbjct: 63  LQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHA 122

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            +  L  +V    G+++FT  +A      G  
Sbjct: 123 VKACLPALVSSR-GSVVFTISNAGFYPNGGGP 153

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 76.8 bits (190), Expect = 8e-18
 Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 10/150 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           IA I G    +G + A++F  EG  V I  R    L     EI          I+ D ++
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG----AVGIQADSAN 86

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              +   +E V +  G ++VL  NA            E++ + +  +   +  G     Q
Sbjct: 87  LAELDRLYEKVKAEAGRIDVLFVNA---GGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           + L  +      +++ TG +A   G   FS
Sbjct: 144 KALPLL--ARGSSVVLTGSTAGSTGTPAFS 171

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 76.8 bits (190), Expect = 9e-18
 Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 18/154 (11%)

Query: 9   SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAI 67
           S  +G+          G   AR  A  G  VAI  A           E+ +    +  A 
Sbjct: 29  SGPKGM----------GIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAY 78

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
           +       S  +  + V++  G ++  + NA    +   +   + S +++   + +   G
Sbjct: 79  KCQVDSYESCEKLVKDVVADFGQIDAFIANA--GATA-DSGILDGSVEAWNHVVQVDLNG 135

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            F CA+ V     ERG G+++ T   AS++G   
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVIT---ASMSGHIA 166

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 76.5 bits (189), Expect = 1e-17
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 7/149 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G +IARK    G  V + ARD+ +L     EI      +  +   D S 
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREI-VAAGGEAESHACDLSH 89

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           S ++     GVL+  G  +VLV NA   V W       +    +   IA++    +L  +
Sbjct: 90  SDAIAAFATGVLAAHGRCDVLVNNA--GVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLR 147

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
                M+   +G II     +SL G    
Sbjct: 148 AFAPAMIAAKRGHIINI---SSLAGKNPV 173

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 76.4 bits (189), Expect = 1e-17
 Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 7/150 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            I+ G    +G+ +A +FA EG  V I  R   +L     EI  +   Q+  +++D  ++
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEI-EQFPGQILTVQMDVRNT 67

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             +++  E +    G +++L+ NA    ++      ++S + +   I I   G F C+Q 
Sbjct: 68  DDIQKMIEQIDEKFGRIDILINNA--AGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQA 124

Query: 134 VLSGMVERG-KGTIIFTGCSASLNGIAGFS 162
           +    +E+G KG II    + + +   G  
Sbjct: 125 IGKYWIEKGIKGNIINMVATYAWDAGPGVI 154

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 76.0 bits (188), Expect = 1e-17
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 17/157 (10%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           GSS RG+          G++ A + A  GY + I  AR        A+EI  +   +V  
Sbjct: 11  GSS-RGV----------GKAAAIRLAENGYNIVINYARSKKAALETAEEI-EKLGVKVLV 58

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
           ++ +      ++E F+ +    G ++V V NA    S       E+    +  ++ I++ 
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNA---ASGVLRPVMELEETHWDWTMNINAK 115

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
               CAQ+    M + G G I+      S+  +  ++
Sbjct: 116 ALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYT 152

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 75.2 bits (186), Expect = 3e-17
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 24/152 (15%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+V G G  +GR   +     G  V  + R    L   A E        +  + +D  D 
Sbjct: 10  ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-----IEPVCVDLGDW 64

Query: 75  RSVREAFEGVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
            +  +A      +G V++LV NA     QP       F E++ ++F +S +++    F  
Sbjct: 65  DATEKALG---GIGPVDLLVNNAALVIMQP-------FLEVTKEAFDRSFSVNLRSVFQV 114

Query: 131 AQQVLSGMVERGK-GTIIFTGCSASLNGIAGF 161
           +Q V   M+ RG  G+I+     +S+     F
Sbjct: 115 SQMVARDMINRGVPGSIVNV---SSMVAHVTF 143

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 75.7 bits (187), Expect = 3e-17
 Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 8/167 (4%)

Query: 1   MRNMTSSGSSCR---GIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI 56
           M + ++  SS        AI+ G    +G + A+ F   G  V I         +  + I
Sbjct: 1   MGSTSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI 60

Query: 57  AREEKSQVFAIRIDCSDSRSVREAFEGVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDS 115
                  +  +  D +    VR   +  ++  G ++++  N    +S  P +  E   + 
Sbjct: 61  G--SPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNV-GVLSTTPYSILEAGNED 117

Query: 116 FQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           F++ + I+  GAFL A+     M+   KG+I+FT   +S     G S
Sbjct: 118 FKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVS 164

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 75.5 bits (186), Expect = 3e-17
 Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 26/168 (15%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFA---HEGYTVAILARDLGRLSRFADEI-AREEKSQ 63
           G+S RG           GR++A + A     G  + + AR    L +  +E+ A++   +
Sbjct: 13  GAS-RGF----------GRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61

Query: 64  VFAIRIDCSDSRSVREAFEGVLSLGFVE-----VLVYNA--YQPVSWQPTNFTEISFDSF 116
           V     D      V+     V  L   E     +L+ NA     VS              
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGF--LNVNDLAEV 119

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASLNGIAGFS 162
               A++           L+   +      T++      +L    G+ 
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWG 167

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 74.9 bits (185), Expect = 3e-17
 Identities = 20/154 (12%), Positives = 41/154 (26%), Gaps = 19/154 (12%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
            +               G +       +GYTV               + A  ++ +    
Sbjct: 8   HAR-HFA----------GPAAVEALTQDGYTVVCHDAS-------FADAAERQRFESENP 49

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
                  +      +  L     ++ +V N Y P           S    ++     S+ 
Sbjct: 50  GTIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIF 109

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             L  Q  ++ +   G  ++IF   S     +A 
Sbjct: 110 PILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY 143

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 74.5 bits (184), Expect = 5e-17
 Identities = 38/156 (24%), Positives = 56/156 (35%), Gaps = 23/156 (14%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           GS+  GI          G  IA+  A  G  + +           A         +    
Sbjct: 11  GST-SGI----------GLGIAQVLARAGANIVLNGFGDPAP---ALAEIARHGVKAVHH 56

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSL 125
             D SD   +   F       G V++LV NA  Q V+       +   +S+ K IA++  
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVA----PVEQFPLESWDKIIALNLS 112

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
             F   +  L GM  R  G II     AS++G+ G 
Sbjct: 113 AVFHGTRLALPGMRARNWGRIINI---ASVHGLVGS 145

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 74.4 bits (184), Expect = 5e-17
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 24/152 (15%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            +V G G  +GR   +     G  V  ++R    L     E        +  + +D  D 
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGDW 64

Query: 75  RSVREAFEGVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
            +   A     S+G V++LV NA     QP       F E++ ++F +S  ++       
Sbjct: 65  EATERALG---SVGPVDLLVNNAAVALLQP-------FLEVTKEAFDRSFEVNLRAVIQV 114

Query: 131 AQQVLSGMVERGK-GTIIFTGCSASLNGIAGF 161
           +Q V  G++ RG  G I+     +S       
Sbjct: 115 SQIVARGLIARGVPGAIVNV---SSQCSQRAV 143

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 74.5 bits (184), Expect = 6e-17
 Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G S  R    EG  V             A E+A         + +D + 
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQ 64

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               + A +  ++  G + VLV NA   +        + +   +Q+ + ++  G FL  +
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLVNNA--GIL-NIGTIEDYALTEWQRILDVNLTGVFLGIR 121

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
            V+  M E G+G+II     +S+ G+AG 
Sbjct: 122 AVVKPMKEAGRGSIINI---SSIEGLAGT 147

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 74.5 bits (184), Expect = 6e-17
 Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 14/145 (9%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +G +I  + A  G  V   +R+   L    +   RE+   V     D        +  + 
Sbjct: 33  IGYAIVEELAGLGARVYTCSRNEKELDECLEIW-REKGLNVEGSVCDLLSRTERDKLMQT 91

Query: 84  VLSL--GFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSG 137
           V  +  G + +LV NA    ++          + +   +   +  +   A+  +Q     
Sbjct: 92  VAHVFDGKLNILVNNAGVVIHKE-------AKDFTEKDYNIIMGTNFEAAYHLSQIAYPL 144

Query: 138 MVERGKGTIIFTGCSASLNGIAGFS 162
           +     G +IF    A  + +   S
Sbjct: 145 LKASQNGNVIFLSSIAGFSALPSVS 169

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 74.5 bits (184), Expect = 8e-17
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 12/149 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  + G G  +G  I R F + G  V I  +D         E+          I  D + 
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG-----AVFILCDVTQ 65

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V+      +   G ++ +V NA       P    E S   F++ + ++ LG +   +
Sbjct: 66  EDDVKTLVSETIRRFGRLDCVVNNA--GHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK 123

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
             L  +  + +G +I     +SL G  G 
Sbjct: 124 LALPYL-RKSQGNVINI---SSLVGAIGQ 148

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 74.6 bits (184), Expect = 8e-17
 Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 8/139 (5%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +GR +A   A  G  V + AR    L +          +    I     D     +    
Sbjct: 40  IGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ 99

Query: 84  VLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
               +G +++L+ N    ++    N         +KS+ ++ L   +     L  M+++ 
Sbjct: 100 AGKLMGGLDMLILNH---ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALP-MLKQS 155

Query: 143 KGTIIFTGCSASLNGIAGF 161
            G+I+     +SL G   +
Sbjct: 156 NGSIVVV---SSLAGKVAY 171

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 74.1 bits (183), Expect = 8e-17
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 17/147 (11%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+V G    +G ++       G  VA+  R           IA +       +  D  ++
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRA-------VAGIAAD-----LHLPGDLREA 78

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
                    V + LG ++++V NA   V       TE +   +  S+ ++    F   + 
Sbjct: 79  AYADGLPGAVAAGLGRLDIVVNNA--GVI-SRGRITETTDADWSLSLGVNVEAPFRICRA 135

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAG 160
            +  M   G G I+       L    G
Sbjct: 136 AIPLMAAAGGGAIVNVASCWGLRPGPG 162

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 74.1 bits (183), Expect = 9e-17
 Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 16/151 (10%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+V G    LG  IA+  A  G +V + +R+L   S  A ++  +   +  A R D S+ 
Sbjct: 24  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 83

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
             V++  E V    G ++ +V  A      P         E   D F++ I ++  G + 
Sbjct: 84  EEVKKLLEAVKEKFGKLDTVVNAAGINRRHP-------AEEFPLDEFRQVIEVNLFGTYY 136

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             ++  S + E    +II      SL     
Sbjct: 137 VCREAFSLLRESDNPSIINI---GSLTVEEV 164

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 74.1 bits (183), Expect = 1e-16
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            IV G    +G +  R  A  G  VA++ R         +++ +E   +  A + D S++
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 76

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             V +  + + + LG +  L+ NA   VS      TE++ + F     ++  G F   + 
Sbjct: 77  DIVTKTIQQIDADLGPISGLIANA--GVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRA 133

Query: 134 VLSGMVER-GKGTIIFTG 150
           V    +++  KG+I+ T 
Sbjct: 134 VAKLWLQKQQKGSIVVTS 151

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 25/154 (16%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G+S +GI          G  + R +    Y V   +R +                 +  +
Sbjct: 35  GAS-QGI----------GAGLVRAYRDRNYRVVATSRSI----------KPSADPDIHTV 73

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
             D S   +        +   G ++ LV NA   V      F E++ + +  ++ ++  G
Sbjct: 74  AGDISKPETADRIVREGIERFGRIDSLVNNA--GVF-LAKPFVEMTQEDYDHNLGVNVAG 130

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            F   Q+  + M+++G G I+    S     + G
Sbjct: 131 FFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG 164

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 21/156 (13%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G S  GI          G ++AR  A  G  V   ARD   +S   D + R     V   
Sbjct: 31  GVS-SGI----------GLAVARTLAARGIAVYGCARDAKNVSAAVDGL-RAAGHDVDGS 78

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
             D + +  V  A    +   G + +LV +A +          ++    +   +  +  G
Sbjct: 79  SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG---GETADLDDALWADVLDTNLTG 135

Query: 127 AFLCAQQVL--SGMVERGKGTIIFTGCSASLNGIAG 160
            F   ++VL   GM E G G I+     AS  G  G
Sbjct: 136 VFRVTREVLRAGGMREAGWGRIVNI---ASTGGKQG 168

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVF 65
           GSS  GI          GRS A  FA EG  V I  R+  RL     +I +      ++ 
Sbjct: 33  GSS-NGI----------GRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81

Query: 66  AIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISS 124
           A+  D +++    +     L+  G +++LV NA   ++   T  T+   + +QK+  ++ 
Sbjct: 82  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLA-DGTANTDQPVELYQKTFKLNF 140

Query: 125 LGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
                  Q+    +++  KG I+    S+ + G    
Sbjct: 141 QAVIEMTQKTKEHLIKT-KGEIVNV--SSIVAGPQAH 174

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 72.9 bits (180), Expect = 3e-16
 Identities = 31/160 (19%), Positives = 60/160 (37%), Gaps = 28/160 (17%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G S RGI          G  I  + A  G +V   +R+   L+    +  R +  +V A 
Sbjct: 16  GGS-RGI----------GYGIVEELASLGASVYTCSRNQKELNDCLTQW-RSKGFKVEAS 63

Query: 68  RIDCSDSRSVREAFEGVLSL--GFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIA 121
             D S     +E    V +   G + +LV NA    Y+          + + + +   ++
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKE-------AKDYTVEDYSLIMS 116

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           I+   A+  +      +    +G ++F    +S++G    
Sbjct: 117 INFEAAYHLSVLAHPFLKASERGNVVFI---SSVSGALAV 153

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 73.0 bits (180), Expect = 3e-16
 Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 20/150 (13%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G ++       G  V  ++ D       +D             +ID ++
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF-----------KIDVTN 64

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
              V+EA E      G +++LV NA  +      +       + +++ I ++  G++L A
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIEQ----YSPLHLTPTEIWRRIIDVNVNGSYLMA 120

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           +  +  M+  G G+II     AS+   A  
Sbjct: 121 KYTIPVMLAIGHGSIINI---ASVQSYAAT 147

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 72.5 bits (179), Expect = 3e-16
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 15/147 (10%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            +V G    +GR+IA+ FA EG  VA+            +     E       ++D  D 
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLR-------PEGKEVAEAIGGAFFQVDLEDE 61

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           R      E     LG V+VLV NA   ++  P +   +    +++ + ++       +  
Sbjct: 62  RERVRFVEEAAYALGRVDVLVNNA--AIA-APGSALTVRLPEWRRVLEVNLTAPMHLSAL 118

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAG 160
               M + G G I+     AS+ G+  
Sbjct: 119 AAREMRKVGGGAIVNV---ASVQGLFA 142

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 72.6 bits (179), Expect = 3e-16
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV 84
           G  IAR+    G  + + AR   R+   A EI R+      A  +D +D  SV    +  
Sbjct: 17  GEGIARELGVAGAKILLGARRQARIEAIATEI-RDAGGTALAQVLDVTDRHSVAAFAQAA 75

Query: 85  LS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV 139
           +   G ++VLV NA      P++        +  D +++ I ++  G       VL  M 
Sbjct: 76  VDTWGRIDVLVNNAGVMPLSPLA-------AVKVDEWERMIDVNIKGVLWGIGAVLPIME 128

Query: 140 ERGKGTIIFTG 150
            +  G II  G
Sbjct: 129 AQRSGQIINIG 139

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 72.1 bits (178), Expect = 4e-16
 Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 11/149 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              I G    LG   AR+    G  V +        +  A E+            +D + 
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA----ARYQHLDVTI 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               +          G V+ LV NA   +S         S + F+K + I+  G F+  +
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNA--GIS-TGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
            V+  M + G G+I+     +S  G+ G 
Sbjct: 120 TVIPAMKDAGGGSIVNI---SSAAGLMGL 145

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 72.2 bits (178), Expect = 4e-16
 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 18/143 (12%)

Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV 84
           G +  R+    G  V +  R+   ++R  +E        V A+R D +D   +       
Sbjct: 21  GLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR----VHALRSDIADLNEIAVLGAAA 76

Query: 85  LS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV 139
              LG +++L  NA     +P       F ++S  S+ +  A+++ GAF   Q++   + 
Sbjct: 77  GQTLGAIDLLHINAGVSELEP-------FDQVSEASYDRQFAVNTKGAFFTVQRLTPLI- 128

Query: 140 ERGKGTIIFTGCSASLNGIAGFS 162
            R  G+I+FT   A   G  G S
Sbjct: 129 -REGGSIVFTSSVADEGGHPGMS 150

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 71.8 bits (177), Expect = 6e-16
 Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 22/149 (14%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            IV G    +GR+IA +F  EG  V  L+                 +++   I  D ++ 
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIH------------DPGEAKYDHIECDVTNP 58

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             V+ + + +    G + VLV NA  +           +S   +++ I ++  G +  ++
Sbjct: 59  DQVKASIDHIFKEYGSISVLVNNAGIES----YGKIESMSMGEWRRIIDVNLFGYYYASK 114

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
             +  M+     +I+     +S+      
Sbjct: 115 FAIPYMIRSRDPSIVNI---SSVQASIIT 140

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 71.8 bits (177), Expect = 6e-16
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 25/159 (15%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G + +GI          G +I  +FA  G  +   AR+   L+    +  +++  QV   
Sbjct: 21  GGT-KGI----------GHAIVEEFAGFGAVIHTCARNEYELNECLSKW-QKKGFQVTGS 68

Query: 68  RIDCSDSRSVREAFEGVLSL--GFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIA 121
             D S      +  + V S+  G +++L+ N      +P         + + + F   I+
Sbjct: 69  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP-------TLDYTAEDFSFHIS 121

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            +   A+  +Q     +   G G IIF    A +   + 
Sbjct: 122 TNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV 160

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 71.4 bits (176), Expect = 7e-16
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AI+ G    +G +IA KF  EG  V I  R      + A  +   +  Q+   + D SD 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDE 66

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
               + F+      G V  LV NA   ++    +  E +   ++K +A++  G F   + 
Sbjct: 67  DGWTKLFDATEKAFGPVSTLVNNA--GIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRL 123

Query: 134 VLSGMVERGKG-TIIFTGCSASLNGIAGF 161
            +  M  +G G +II     +S+ G  G 
Sbjct: 124 GIQRMKNKGLGASIINM---SSIEGFVGD 149

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 71.4 bits (176), Expect = 8e-16
 Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 19/158 (12%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFA 66
           G S RGI          G ++ R  A +G+ V +  A +          I  E   +  A
Sbjct: 33  GGS-RGI----------GAAVCRLAARQGWRVGVNYAANREAADAVVAAI-TESGGEAVA 80

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
           I  D  ++  +   F  V    G ++ LV NA   +   P    E+S +  ++ + ++  
Sbjct: 81  IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNA--GIVDYPQRVDEMSVERIERMLRVNVT 138

Query: 126 GAFLCAQQVLSGMVERGK---GTIIFTGCSASLNGIAG 160
           G+ LCA + +  M        G I+     A++ G A 
Sbjct: 139 GSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT 176

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 71.5 bits (176), Expect = 9e-16
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 18/158 (11%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVF 65
           GSS  GI          GR+ A  FA EG  V I  R   RL     +I      +  V 
Sbjct: 13  GSS-NGI----------GRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 66  AIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAIS 123
           ++  D +      E     L   G +++LV NA       Q    T  S +S+  ++ ++
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 124 SLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
                   ++ +  +    KG I+    S+  +G+   
Sbjct: 122 LRSVIALTKKAVPHLSS-TKGEIVNI--SSIASGLHAT 156

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 25/160 (15%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRFADEIAREEKSQVF 65
           G S RGI          G+SI            +  +AR    L     ++  +   + F
Sbjct: 9   GVS-RGI----------GKSIVDVLFSLDKDTVVYGVARSEAPL----KKLKEKYGDRFF 53

Query: 66  AIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAI 122
            +  D ++   +++     +   G ++ LV NA   +PV     N  EI  ++++K   I
Sbjct: 54  YVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQ----NVNEIDVNAWKKLYDI 109

Query: 123 SSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +           L  + +   G ++F    A     + + 
Sbjct: 110 NFFSIVSLVGIALPELKKT-NGNVVFVSSDACNMYFSSWG 148

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 13/141 (9%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFE 82
           +G   A +    G+ V I  R              E  ++   A+  D S    +    +
Sbjct: 39  VGLHCALRLLEHGHRVIISYRT-------EHASVTELRQAGAVALYGDFSCETGIMAFID 91

Query: 83  GVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER 141
            + +    +  +V+NA     W      E   D+F +  ++  L  +L        +   
Sbjct: 92  LLKTQTSSLRAVVHNAS---EWLAETPGE-EADNFTRMFSVHMLAPYLINLHCEPLLTAS 147

Query: 142 GKGTIIFTGCSASLNGIAGFS 162
               I+      +  G +   
Sbjct: 148 EVADIVHISDDVTRKGSSKHI 168

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 70.7 bits (174), Expect = 1e-15
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 25/146 (17%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G + +GI          GR IA  FA  G  VA+  R    +     ++ +    +V  +
Sbjct: 17  GGT-KGI----------GRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-----YQPVSWQPTNFTEISFDSFQKSIA 121
           + D SD           +   G ++V+  NA                  ++ +      A
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD--------APLATMTPEQLNGIFA 117

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTII 147
           ++  G F   Q  L  ++  G G ++
Sbjct: 118 VNVNGTFYAVQACLDALIASGSGRVV 143

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 71.2 bits (175), Expect = 1e-15
 Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 9/150 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G    +G + A +FA  G  + +   D   L +  + + R +      +  D   
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGL-RGQGFDAHGVVCDVRH 91

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              +    +     LG V+V+  NA   +        +++ D ++  I I   G+    +
Sbjct: 92  LDEMVRLADEAFRLLGGVDVVFSNA--GIVVAGP-LAQMNHDDWRWVIDIDLWGSIHAVE 148

Query: 133 QVLSGMVERGK-GTIIFTGCSASLNGIAGF 161
             L  ++E+G  G I FT   AS  G+   
Sbjct: 149 AFLPRLLEQGTGGHIAFT---ASFAGLVPN 175

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 70.6 bits (174), Expect = 1e-15
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 11/163 (6%)

Query: 5   TSSGSSCRGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS- 62
            +     +    ++ G   NLG   A+ FA E   + +           A+++  E +  
Sbjct: 3   LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDT-ANKLKDELEDQ 61

Query: 63  --QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKS 119
             +V   + D S+   V + F+      G V++ +    +          E S   F   
Sbjct: 62  GAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGK---VLKKPIVETSEAEFDAM 118

Query: 120 IAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             I++  A+   +Q    M   G   II    S        +S
Sbjct: 119 DTINNKVAYFFIKQAAKHMNPNGH--IITIATSLLAAYTGFYS 159

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 70.7 bits (174), Expect = 2e-15
 Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 14/154 (9%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
             + +G+          G+ +  K   +GY+V +             E  ++ + ++  +
Sbjct: 14  AGT-KGL----------GKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFV 62

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
           + D +    + +  E  +S  G ++ L+ NA   V  +     +   D + + I  +   
Sbjct: 63  QADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVF-ERKKLVDYEEDEWNEMIQGNLTA 121

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            F   + V+  M ++  G II  G     +   G
Sbjct: 122 VFHLLKLVVPVMRKQNFGRIINYG-FQGADSAPG 154

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 70.7 bits (174), Expect = 2e-15
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 18/158 (11%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI--AREEKSQVF 65
           GSS  GI          GR+ A  FA EG  V I  R   RL      I  +   + QV 
Sbjct: 13  GSS-NGI----------GRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 66  AIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAIS 123
           ++  D +      +     L   G ++VLV NA         T  T+   D + K++ ++
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 124 SLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
                   ++V   +V   KG I+    S+ + G    
Sbjct: 122 LQAVIEMTKKVKPHLVAS-KGEIVNV--SSIVAGPQAQ 156

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 69.9 bits (172), Expect = 2e-15
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 14/156 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDLGRLSRFADEIAREEKSQVFA 66
           I  I G G  +GR+IA +FA            + + +R    L + + E  R E +    
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC-RAEGALTDT 62

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISS 124
           I  D SD   VR     ++   G ++ LV NA            ++++ + F  ++  + 
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFG----ALSDLTEEDFDYTMNTNL 118

Query: 125 LGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            G F   Q + + M  +  G I F    A+      
Sbjct: 119 KGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH 154

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 70.3 bits (173), Expect = 3e-15
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 27/147 (18%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G + +GI          GR IA  FA  G  VA+ AR    LS    E+       V  +
Sbjct: 48  GGT-KGI----------GRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFT------EISFDSFQKSI 120
           R+D SD  S  +A   V+   G ++V+  NA                   ++ +   + +
Sbjct: 97  RLDVSDPGSCADAARTVVDAFGALDVVCANA---------GIFPEARLDTMTPEQLSEVL 147

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTII 147
            ++  G     Q  L+ +   G+G +I
Sbjct: 148 DVNVKGTVYTVQACLAPLTASGRGRVI 174

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 69.5 bits (171), Expect = 3e-15
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 25/150 (16%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           +GI          G + A  F   G  V    +              +E+       +D 
Sbjct: 17  KGI----------GYATALAFVEAGAKVTGFDQA-----------FTQEQYPFATEVMDV 55

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +D+  V +  + +L+    ++ LV  A   +  +     ++S + +Q++ A++  GAF  
Sbjct: 56  ADAAQVAQVCQRLLAETERLDALVNAA--GIL-RMGATDQLSKEDWQQTFAVNVGGAFNL 112

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            QQ ++    +  G I+     A+     G
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIG 142

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 69.5 bits (171), Expect = 4e-15
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 16/142 (11%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +GR+IA  +A  G  V    R    +   ADEI  +      A+  D +D        E 
Sbjct: 43  IGRAIAHGYARAGAHVLAWGRT-DGVKEVADEI-ADGGGSAEAVVADLADLEGAANVAEE 100

Query: 84  VLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV 139
           + +   V+VLV NA      P         E+S   +++ + ++   A++ ++   + M+
Sbjct: 101 LAATRRVDVLVNNAGIIARAP-------AEEVSLGRWREVLTVNLDAAWVLSRSFGTAML 153

Query: 140 ERGKGTIIFTGCSASLNGIAGF 161
             G G I+     AS+    G 
Sbjct: 154 AHGSGRIVTI---ASMLSFQGG 172

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 69.1 bits (170), Expect = 5e-15
 Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 24/152 (15%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           AIV  V    G   A + +  G+TVA          +  DE+    ++     ++     
Sbjct: 4   AIVTNVKHFGGMGSALRLSEAGHTVACHDES----FKQKDELEAFAET---YPQLKPMSE 56

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA-----YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
           +   E  E V S  G V+VLV N      +QP         + + + ++ ++    +  F
Sbjct: 57  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP-------IDKYAVEDYRGAVEALQIRPF 109

Query: 129 LCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
                V S M +R  G IIF     S      
Sbjct: 110 ALVNAVASQMKKRKSGHIIFI---TSATPFGP 138

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 69.1 bits (170), Expect = 6e-15
 Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 25/159 (15%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFA 66
           GSS  G+          G+S+A +FA E   V +         +   +EI ++   +  A
Sbjct: 14  GSS-TGL----------GKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAIA 61

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAIS 123
           ++ D +    V    +  +   G ++V++ NA    P      +  E+S   + K I  +
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP-----VSSHEMSLSDWNKVIDTN 116

Query: 124 SLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGF 161
             GAFL +++ +   VE   KGT+I     +S++    +
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINM---SSVHEKIPW 152

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 68.7 bits (169), Expect = 7e-15
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+V G    LG + A   A  G  V +       L+   D +   +      +  D +D 
Sbjct: 12  ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL-TRKGYDAHGVAFDVTDE 70

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
            ++  AF  + +    V++L+ NA     +P         E+  +++QK I  +   AFL
Sbjct: 71  LAIEAAFSKLDAEGIHVDILINNAGIQYRKP-------MVELELENWQKVIDTNLTSAFL 123

Query: 130 CAQQVLSGMVERGK-GTIIFTGCSASLNGIAG 160
            ++     M+ R   G II      SL   A 
Sbjct: 124 VSRSAAKRMIARNSGGKIINI---GSLTSQAA 152

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 69.2 bits (170), Expect = 7e-15
 Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 21/156 (13%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G++  GI          G  IAR+   EG  V + AR    L     E+ RE   +    
Sbjct: 29  GAT-SGI----------GLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGR 76

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
             D      +      V+   G V+VLV NA +P         E++ + +   +  +  G
Sbjct: 77  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG---GATAELADELWLDVVETNLTG 133

Query: 127 AFLCAQQVL--SGMVERGKGTIIFTGCSASLNGIAG 160
            F   +QVL   GM+ERG G I+     AS  G  G
Sbjct: 134 VFRVTKQVLKAGGMLERGTGRIVNI---ASTGGKQG 166

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 68.3 bits (168), Expect = 8e-15
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 7/138 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  + G     G  I R+F  +G+ V    R   RL     E+  E    ++  ++D  +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL----QELKDELGDNLYIAQLDVRN 57

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             ++ E    + +    +++LV NA   +  +P    + S + ++  I  ++ G     +
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEP--AHKASVEDWETMIDTNNKGLVYMTR 115

Query: 133 QVLSGMVERGKGTIIFTG 150
            VL GMVER  G II  G
Sbjct: 116 AVLPGMVERNHGHIINIG 133

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 68.3 bits (168), Expect = 9e-15
 Identities = 21/149 (14%), Positives = 51/149 (34%), Gaps = 15/149 (10%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  +      +G++ A  FA EG  V     +  +L         +         +D + 
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ------TRVLDVTK 61

Query: 74  SRSVREAFEGVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            + + +       +  ++VL   A +           +     +  S+ ++    +L  +
Sbjct: 62  KKQIDQFAN---EVERLDVLFNVAGFVH----HGTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 133 QVLSGMVERGKGTIIFTG-CSASLNGIAG 160
             L  M+ +  G II     ++S+ G+  
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVN 143

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 68.3 bits (168), Expect = 1e-14
 Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 25/156 (16%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G++ +GI          G++IA + A +G TV +   +       A  I +    +  AI
Sbjct: 13  GAA-QGI----------GKAIAARLAADGATVIVSDINAEGAKAAAASIGK----KARAI 57

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTN-FTEISFDSFQKSIAISSL 125
             D SD  SV+  F  + +  G +++LV NA    S  P   + ++  D ++K I ++  
Sbjct: 58  AADISDPGSVKALFAEIQALTGGIDILVNNA----SIVPFVAWDDVDLDHWRKIIDVNLT 113

Query: 126 GAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAG 160
           G F+  +     M   GK G +I     AS    AG
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISI---ASNTFFAG 146

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 68.4 bits (168), Expect = 1e-14
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEI-AREEKSQVFAIRIDCSDSRSVREAFEG 83
           G ++AR    +G  V   AR +G +   A E  +      +   R D S+   +   F  
Sbjct: 45  GAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA 104

Query: 84  VLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
           + S    V++ + NA      +P      S   ++    ++ L   +C ++    M ER 
Sbjct: 105 IRSQHSGVDICINNAGL---ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN 161

Query: 143 --KGTIIFTG 150
              G II   
Sbjct: 162 VDDGHIININ 171

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 68.3 bits (168), Expect = 1e-14
 Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 25/157 (15%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QV 64
           G+  R I          GR+ A +FA EG  V +     G     A     E +      
Sbjct: 15  GAG-RDI----------GRACAIRFAQEGANVVLT--YNGAAEG-AATAVAEIEKLGRSA 60

Query: 65  FAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAIS 123
            AI+ D +++  V  A        G +  LV+ A            E+    + + + ++
Sbjct: 61  LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVA--GGLIARKTIAEMDEAFWHQVLDVN 118

Query: 124 SLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
               FL A+  L  M + G   I+     +S  G  G
Sbjct: 119 LTSLFLTAKTALPKMAKGGA--IVTF---SSQAGRDG 150

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 23/159 (14%)

Query: 1   MRNMTSSGSSCRGI----AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI 56
           M +MT      RG       I G    +G +IAR+F+ EG+ + +LAR + RL       
Sbjct: 1   MASMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP- 59

Query: 57  AREEKSQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEI 111
                      ++D +D  +   A        G  + +V NA       +          
Sbjct: 60  ------NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQID-------TQ 106

Query: 112 SFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTG 150
             + +Q+   ++ LG     Q VL+ M  R  GTII   
Sbjct: 107 EANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINIS 145

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 67.0 bits (164), Expect = 2e-14
 Identities = 22/146 (15%), Positives = 43/146 (29%), Gaps = 13/146 (8%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            +V G    LG    + F    + VA +           +E A      V         +
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVV-------ENEEASASV-IVKMTDSFTEQA 61

Query: 75  RSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQV 134
             V      +L    V+ ++  A           ++  F +       S   + + +   
Sbjct: 62  DQVTAEVGKLLGDQKVDAILCVAG--GWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119

Query: 135 LSGMVERGKGTIIFTGCSASLNGIAG 160
              +  +  G +   G  A+L+G  G
Sbjct: 120 TKHL--KEGGLLTLAGAKAALDGTPG 143

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 6/128 (4%)

Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV 84
           G + AR+FA  G+++ +  R   RL   A E+    K++V  + +D  D  ++  A + +
Sbjct: 34  GEACARRFAEAGWSLVLTGRREERLQALAGEL--SAKTRVLPLTLDVRDRAAMSAAVDNL 91

Query: 85  LS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK 143
                 +  L+ NA   +   P        D +   +  +  G     + +L  ++  G 
Sbjct: 92  PEEFATLRGLINNAGLALGTDP--AQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGA 149

Query: 144 G-TIIFTG 150
           G +I+  G
Sbjct: 150 GASIVNLG 157

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 21/159 (13%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFA 66
           G   RGI          G  IAR  A  G+ +AI    D   ++    E+     ++V  
Sbjct: 36  GGR-RGI----------GLGIARALAASGFDIAITGIGDAEGVAPVIAEL-SGLGARVIF 83

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
           +R D +D  S +   + V++  G ++ LV NA    S    +F ++  ++F   + ++  
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNA-GIASIVRDDFLDLKPENFDTIVGVNLR 142

Query: 126 GAFLCAQQVLSGMVE---RGKGTIIFTGCSASLNGIAGF 161
           G     Q VL  M+    R   +II      S++ +   
Sbjct: 143 GTVFFTQAVLKAMLASDARASRSIINI---TSVSAVMTS 178

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 23/140 (16%), Positives = 51/140 (36%), Gaps = 12/140 (8%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           LG  +A+ +  EG    +  R   +LS   + +     + V     D +  + V + FE 
Sbjct: 13  LGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQEVEQLFEQ 68

Query: 84  VLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG 142
           + S+     +V++A             E   +  Q  I  +   A    ++++    ++ 
Sbjct: 69  LDSI--PSTVVHSAGSGYFG----LLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP 122

Query: 143 KGTIIFTGCSASLNGIAGFS 162
              ++    +A+    A  S
Sbjct: 123 -VNVVMIMSTAAQQPKAQES 141

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 18/137 (13%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +GR++A   + EG  V I AR+   L R                 + C   + +   FE 
Sbjct: 31  IGRAVADVLSQEGAEVTICARNEELLKRSGHRY------------VVCDLRKDLDLLFE- 77

Query: 84  VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK 143
              +  V++LV NA  P   +   F E++ + F+++I    L      +  L  M E+G 
Sbjct: 78  --KVKEVDILVLNAGGP---KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGW 132

Query: 144 GTIIFTGCSASLNGIAG 160
           G I+     + ++ I  
Sbjct: 133 GRIVAITSFSVISPIEN 149

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 67.1 bits (165), Expect = 3e-14
 Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 9/150 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  + +    EG  VA    +     + A E+      +   +R D S 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSS 63

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
                     V   LG + VLV NA   +   P +      + F + + I++   F+  Q
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNA--GIL-LPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           Q ++ M E G G+II     +S   I  ++
Sbjct: 121 QGIAAMKETG-GSIINMASVSSWLPIEQYA 149

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 8/139 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +G + AR  A EG  VAI AR + +L    DE+     ++V  + +D +D
Sbjct: 9   VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL-TAAGAKVHVLELDVAD 67

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
            + V  A    +  LG +++LV NA    +        +     + + I  + LG     
Sbjct: 68  RQGVDAAVASTVEALGGLDILVNNAGIMLLG----PVEDADTTDWTRMIDTNLLGLMYMT 123

Query: 132 QQVLSGMVERGKGTIIFTG 150
           +  L  ++ R KGT++   
Sbjct: 124 RAALPHLL-RSKGTVVQMS 141

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 66.8 bits (164), Expect = 4e-14
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 28/162 (17%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QV 64
           GSS +GI          G + AR FA  G  V +  R   +     DE     ++     
Sbjct: 14  GSS-QGI----------GLATARLFARAGAKVGLHGR---KAPANIDETIASMRADGGDA 59

Query: 65  FAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAIS 123
                D + S + ++  +  ++  G ++VL+ NA   V        EI    +   +  +
Sbjct: 60  AFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLV--GRKPLPEIDDTFYDAVMDAN 117

Query: 124 SLGAFLCAQQVLSGMVERGK-----GTIIFTGCSASLNGIAG 160
                +  +  L  +    K       +I T    S+ G  G
Sbjct: 118 IRSVVMTTKFALPHLAAAAKASGQTSAVIST---GSIAGHTG 156

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 66.9 bits (164), Expect = 4e-14
 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 14/158 (8%)

Query: 13  GIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
           G +AIV G    LG +  R+   +G  V I      +    ADE+     ++   +  + 
Sbjct: 30  GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG----NRAEFVSTNV 85

Query: 72  SDSRSVREAFEGVLSL-GFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
           +   SV  A E    L      +V +            + +      F K+I +   G +
Sbjct: 86  TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTY 145

Query: 129 LCAQQVLSGMVER------GKGTIIFTGCSASLNGIAG 160
             A+ V + +          +G ++ T   A   G  G
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG 183

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 66.0 bits (162), Expect = 7e-14
 Identities = 15/149 (10%), Positives = 45/149 (30%), Gaps = 19/149 (12%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            +V G    +G+++            I               + E    +  I+ D +  
Sbjct: 7   YLVTGGSKGIGKAVVELLLQNKNHTVINIDI-------QQSFSAEN---LKFIKADLTKQ 56

Query: 75  RSVREAFEGVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           + +    + +      + +  NA          +  +I  +S +K + ++   +    + 
Sbjct: 57  QDITNVLDII-KNVSFDGIFLNAGILI----KGSIFDIDIESIKKVLDLNVWSSIYFIKG 111

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           + + +  +   +I+F G            
Sbjct: 112 LENNL--KVGASIVFNGSDQCFIAKPNSF 138

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 66.0 bits (162), Expect = 8e-14
 Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 17/152 (11%)

Query: 25  GRSIARKFAHEGYTVAI--LARDLGRLSRF-------ADEIAREEKS---QVFAIRIDCS 72
           GR+ A + A EG  +    +A  L     +         E  R  ++   ++ A  +D  
Sbjct: 24  GRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR 83

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D   +R+  +  ++ LG ++++V NA       P  + +I+ + F+  + I+  G +   
Sbjct: 84  DFDRLRKVVDDGVAALGRLDIIVANAGV---AAPQAWDDITPEDFRDVMDINVTGTWNTV 140

Query: 132 QQVLSGMVERGK-GTIIFTGCSASLNGIAGFS 162
                 ++E G+ G+II    +A +       
Sbjct: 141 MAGAPRIIEGGRGGSIILISSAAGMKMQPFMI 172

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 66.0 bits (162), Expect = 9e-14
 Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 19/157 (12%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+S RGI          G +IA + A +G+TV I  A         A +I      +   
Sbjct: 34  GAS-RGI----------GAAIAARLASDGFTVVINYAGKAAAAEEVAGKI-EAAGGKALT 81

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
            + D SD  +VR  F       G V+VLV NA        T   E     F + IA++  
Sbjct: 82  AQADVSDPAAVRRLFATAEEAFGGVDVLVNNA---GIMPLTTIAETGDAVFDRVIAVNLK 138

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           G F   ++    +  R  G II    S        + 
Sbjct: 139 GTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYG 173

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 26/151 (17%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A+V G    +GR+IA      GY VAI +R+              +      +  D    
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---------AQSLGAVPLPTDLEKD 55

Query: 75  RSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
              +   +  L  LG + VLV+ A     +P         E+S++ +++ + +    AFL
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAVNVRKP-------ALELSYEEWRRVLYLHLDVAFL 107

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            AQ     M E G G ++F     S+     
Sbjct: 108 LAQAAAPHMAEAGWGRVLFI---GSVTTFTA 135

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 22/153 (14%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSD 73
           A+V G    +GR+ A     +G  VA++  +L    +    +  + +  +   I+ D +D
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEI-SFDSFQKSIAISSLGAFLCA 131
            + +R+ F  V+   G +++LV NA             + +  +++K++ I+ +      
Sbjct: 70  QQQLRDTFRKVVDHFGRLDILVNNA------------GVNNEKNWEKTLQINLVSVISGT 117

Query: 132 QQVLSGMVERGKG---TIIFTGCSASLNGIAGF 161
              L  M ++  G    II     +SL G+   
Sbjct: 118 YLGLDYMSKQNGGEGGIIINM---SSLAGLMPV 147

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 26/161 (16%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKS---Q 63
           G S RGI          G +IA++ A EG  VA+       R    A  +  E +    +
Sbjct: 38  GGS-RGI----------GAAIAKRLALEGAAVALTYVNAAER----AQAVVSEIEQAGGR 82

Query: 64  VFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAI 122
             AIR D  D+ ++ +A    +  LG +++LV +A     W      E +   F + +A+
Sbjct: 83  AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSA---GIWHSAPLEETTVADFDEVMAV 139

Query: 123 SSLGAFLCAQQVLSGMVERGKGTIIFTG-CSASLNGIAGFS 162
           +    F+  +     + + G+  II  G   A L    G S
Sbjct: 140 NFRAPFVAIRSASRHLGDGGR--IITIGSNLAELVPWPGIS 178

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 64.5 bits (158), Expect = 1e-13
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 18/139 (12%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           LG + AR     G+ + +  R  G L+  A E+         A+  D +D    +   E 
Sbjct: 12  LGGAFARALK--GHDLLLSGRRAGALAELAREV------GARALPADLADELEAKALLE- 62

Query: 84  VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK 143
               G +++LV+      +    +  E   D  ++ +A   L A      VL     +  
Sbjct: 63  --EAGPLDLLVHAV--GKAG-RASVREAGRDLVEEMLAAHLLTAAF----VLKHARFQKG 113

Query: 144 GTIIFTGCSASLNGIAGFS 162
              +F G       + GF+
Sbjct: 114 ARAVFFGAYPRYVQVPGFA 132

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 25  GRSIARKFAHEG---YTVAILARDLGRLSRFADEI-AREEKSQVFAIRIDCSDSRSVREA 80
           G++ A ++         + + AR L +L      I      ++V   ++D + +  ++  
Sbjct: 46  GKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPF 105

Query: 81  FEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV 139
            E +      +++LV NA + +        +I+ +  Q     +        Q VL    
Sbjct: 106 IENLPQEFKDIDILVNNAGKALGSDR--VGQIATEDIQDVFDTNVTALINITQAVLPIFQ 163

Query: 140 ERGKGTIIFTGCSA 153
            +  G I+  G  A
Sbjct: 164 AKNSGDIVNLGSIA 177

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 27/174 (15%), Positives = 51/174 (29%), Gaps = 30/174 (17%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G + R I          G SIA +   +G+ V +      G   R   E+          
Sbjct: 18  GGA-RRI----------GHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVL 66

Query: 67  IRIDCSDSRSVREAFEGVLS-----LGFVEVLVYNA--------YQPVSWQPTNFTEISF 113
            + D S S S+ +  E ++       G  +VLV NA                    +   
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 114 DSFQKSIAISSLGAFLCAQQVLSGMVERG-----KGTIIFTGCSASLNGIAGFS 162
               +    +++      +       E G       +++    + +   + GF 
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFC 180

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI-AREEKSQVFAIRIDCS 72
            A + G    +G  + R+  ++G  VAI       + +    + A     +V  +++D +
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
                + A + V +  G V +L  NA   V+       E S+D +   + ++  G     
Sbjct: 70  SREGFKMAADEVEARFGPVSILCNNA--GVN-LFQPIEESSYDDWDWLLGVNLHGVVNGV 126

Query: 132 QQVLSGMVER------GKGTIIFTGCSASLNGIAGF 161
              +  MVER        G ++ T   AS+      
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNT---ASMAAFLAA 159

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 31/164 (18%), Positives = 71/164 (43%), Gaps = 25/164 (15%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRF------ADEIAREEKS- 62
           RG           GRS A   A EG  +    + + L  +           E  R+ ++ 
Sbjct: 38  RGQ----------GRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL 87

Query: 63  --QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKS 119
             ++ A ++D  D  +++ A +  ++ LG +++++ NA   ++ + T    +   +++  
Sbjct: 88  GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANA--ALASEGTRLNRMDPKTWRDM 145

Query: 120 IAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFS 162
           I ++  GA++ A+  +  ++   + G+I+FT     L G     
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIG 189

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 34/165 (20%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKS---Q 63
           G+  RGI          GR +A +    G  V +  A         A+E+    K     
Sbjct: 36  GAG-RGI----------GREMAMELGRRGCKVIVNYANSTES----AEEVVAAIKKNGSD 80

Query: 64  VFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQK 118
              ++ +      +   FE  +   G ++++  N+    +           +++ + F +
Sbjct: 81  AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH-------VKDVTPEEFDR 133

Query: 119 SIAISSLGAFLCAQQVLSGMVERGKGTIIFTG-CSASLNGIAGFS 162
              I++ G F  A++    +   G+  +I  G  +     +   +
Sbjct: 134 VFTINTRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHA 176

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 64.5 bits (158), Expect = 3e-13
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 20/158 (12%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+  RGI          GR IA +    G +V +              E+ ++  +Q  A
Sbjct: 28  GAG-RGI----------GRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL-KKLGAQGVA 75

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
           I+ D S    V   F+  +S  G ++ ++ N+         +  E++ + F K   +++ 
Sbjct: 76  IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM---EVWCDELEVTQELFDKVFNLNTR 132

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTG-CSASLNGIAGFS 162
           G F  AQQ L      G+  II T   +A + GI   +
Sbjct: 133 GQFFVAQQGLKHCRRGGR--IILTSSIAAVMTGIPNHA 168

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 64.5 bits (158), Expect = 4e-13
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 15/145 (10%)

Query: 25  GRSIARKFAHEGYTVAILARDLGRLSRFADEIAR---EEKSQVFAIRIDCSDSRSVREAF 81
           GR+ A  +A EG  VAI    L      A ++     E   +   +  D SD    R   
Sbjct: 62  GRAAAIAYAREGADVAIN--YLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLV 119

Query: 82  EGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV 139
                 LG +++L   A  Q          +++ + FQ++ A++    F   Q+ +  + 
Sbjct: 120 HKAREALGGLDILALVAGKQ---TAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL- 175

Query: 140 ERGKGTIIFTGCSASLNGIAGFSEL 164
            +G  +II T   +S+        L
Sbjct: 176 PKG-ASIITT---SSIQAYQPSPHL 196

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 63.7 bits (156), Expect = 5e-13
 Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 39/150 (26%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G++  GI          GR+    FA EG  +     + G L   A+ +          +
Sbjct: 12  GAA-HGI----------GRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPV 54

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEI---------SFDSFQ 117
            +D +D  SV   F   L+ LG ++ +V+ A             I           + ++
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYA------------GITRDNFHWKMPLEDWE 102

Query: 118 KSIAISSLGAFLCAQQVLSGMVERGKGTII 147
             + ++  G+FL A+     M E+  G+I+
Sbjct: 103 LVLRVNLTGSFLVAKAASEAMREKNPGSIV 132

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 63.3 bits (155), Expect = 8e-13
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 25/163 (15%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRF------ADEIAREEKS- 62
           RG+          GRS A   A  G  +AI     +   +           E     +  
Sbjct: 20  RGM----------GRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT 69

Query: 63  --QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKS 119
             +  + ++D  D  ++          LG +++ + NA            E+    + + 
Sbjct: 70  GRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI---STIALLPEVESAQWDEV 126

Query: 120 IAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           I  +  G F     V  GM++R  G I+        +     +
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQA 169

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 63.0 bits (154), Expect = 9e-13
 Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 3   NMTSSGSSCRGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK 61
           +M ++  S +G+ A++ G    LG + A +   +G +  +L           +  A++  
Sbjct: 2   HMAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG----GEAQAKKLG 57

Query: 62  SQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTE---ISFDSFQ 117
           +       D +  + V+ A        G V+V V  A   V+ +  N  +    + + FQ
Sbjct: 58  NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ 117

Query: 118 KSIAISSLGAFLCAQQVLSGMVER------GKGTIIFTGCSASLNGIAG 160
           + + ++ +G F   + V   M +        +G II T   A+  G  G
Sbjct: 118 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG 166

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 29/161 (18%), Positives = 64/161 (39%), Gaps = 26/161 (16%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKS---Q 63
           GS  RGI          G ++A      G  V +  A         A+++  E K+    
Sbjct: 25  GSG-RGI----------GAAVAVHLGRLGAKVVVNYANSTKD----AEKVVSEIKALGSD 69

Query: 64  VFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAI 122
             AI+ D      + + F+  ++  G +++ V N+         +  +++ + F +  ++
Sbjct: 70  AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV---VSFGHLKDVTEEEFDRVFSL 126

Query: 123 SSLGAFLCAQQVLSGMVERGKGTIIFTG-CSASLNGIAGFS 162
           ++ G F  A++    + E G+  I+ T   ++    +   S
Sbjct: 127 NTRGQFFVAREAYRHLTEGGR--IVLTSSNTSKDFSVPKHS 165

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 62.6 bits (153), Expect = 1e-12
 Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 13/157 (8%)

Query: 13  GIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
               IV G    LG ++ R  A EG TV  L          A E+     + V     D 
Sbjct: 7   SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG----AAVRFRNADV 62

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTE-ISFDSFQKSIAISSLGAFL 129
           ++      A        G V  LV  A      +    +   + DSF +++A++ +G F 
Sbjct: 63  TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFN 122

Query: 130 CAQQVLSGMVER------GKGTIIFTGCSASLNGIAG 160
             +     M +        +G I+ T   A+ +G  G
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG 159

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 20/166 (12%)

Query: 2   RNMTSSGSSCRGIAAIV-GVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIARE 59
             +   GS     AA+V G    +GR+IA K    GY V I            ADE+ +E
Sbjct: 12  SGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE 71

Query: 60  EKSQVFAIRIDCSDSRSVREAFEGVLS-----LGFVEVLVYNA-------YQPVSWQPTN 107
             +     + D ++S  +  + E +++      G  +VLV NA             +  +
Sbjct: 72  RSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS 131

Query: 108 FTEISFDSFQKSIAISSLGAFLCAQQVLSGM------VERGKGTII 147
             +       + I  +++  FL                     +I+
Sbjct: 132 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 26/164 (15%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRF------ADEIAREEKS- 62
           RG           GR+ A + A +G  +    L R    L           E  R  +  
Sbjct: 56  RGQ----------GRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ 105

Query: 63  --QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKS 119
             ++ A + D  D  S++   +  L+  G +++LV N              ++   +   
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVG---ISNQGEVVSLTDQQWSDI 162

Query: 120 IAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFS 162
           +  + +GA+   + VL  M+ERG+ G++IF   +  L G  G S
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQS 206

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 24/159 (15%), Positives = 48/159 (30%), Gaps = 28/159 (17%)

Query: 10  SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRI 69
           +  GI          G   +R+         ++   +   +  A+  A   K  +     
Sbjct: 13  ALGGI----------GLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 70  DCSDSRS-VREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS-FQKSIAISSLG 126
           D +   +  ++  + +   L  V++L+  A             I  D   +++IAI+  G
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGA------------GILDDHQIERTIAINFTG 110

Query: 127 AFLCAQQVLSGMVER---GKGTIIFTGCSASLNGIAGFS 162
                  +L    +R     G I         N I    
Sbjct: 111 LVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP 149

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 61.8 bits (151), Expect = 3e-12
 Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 13/142 (9%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           +G+ IA+     G  V I ARD    +  A  +         AI  D S     R   + 
Sbjct: 41  IGQMIAQGLLEAGARVFICARDAEACADTATRL--SAYGDCQAIPADLSSEAGARRLAQA 98

Query: 84  VLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLS----GM 138
           +      +++LV NA    SW            ++K + ++    F C QQ+L       
Sbjct: 99  LGELSARLDILVNNA--GTSWG-AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA 155

Query: 139 VERGKGTIIFTGCSASLNGIAG 160
                  +I      S+ GI+ 
Sbjct: 156 SAENPARVINI---GSVAGISA 174

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 61.5 bits (150), Expect = 3e-12
 Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 25/163 (15%)

Query: 12  RGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRID 70
           R   A+V G    LG +  ++    G  V +L  D+       +++  +   +      D
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLDAGAQVVVL--DIR-----GEDVVADLGDRARFAAAD 60

Query: 71  CSDSRSVREAFEGVLSLGFVEVLVYNA-----YQPVSWQPTNFTEISFDSFQKSIAISSL 125
            +D  +V  A +   ++G + ++V  A      + +S         S  +F+K + I+ +
Sbjct: 61  VTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRD----GVFSLAAFRKIVDINLV 116

Query: 126 GAFLCAQQVLSGMVER--------GKGTIIFTGCSASLNGIAG 160
           G+F   +     + +          +G II T   A+ +G  G
Sbjct: 117 GSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG 159

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 61.5 bits (150), Expect = 4e-12
 Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 19/166 (11%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRF----------ADEIAREEK 61
           +A + G     GRS A + A EG  +    + + +                  E A   K
Sbjct: 13  VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK 72

Query: 62  S---QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQ 117
               ++    +D  D  +++ A +  +  LG ++++V NA   +        + S + + 
Sbjct: 73  GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANA--GIGNGGDTLDKTSEEDWT 130

Query: 118 KSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFS 162
           + I I+  G +   +  +  M+  G+ G+II T     L       
Sbjct: 131 EMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTG 176

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 61.0 bits (149), Expect = 5e-12
 Identities = 25/134 (18%), Positives = 56/134 (41%), Gaps = 11/134 (8%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            +V G    +GR+    FA EG ++  + R+         E     +++  A+  D SD 
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREERL----LAEAVAALEAEAIAVVADVSDP 64

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           ++V   F   L   G +  + + A             +  ++++K + ++  G+FL A++
Sbjct: 65  KAVEAVFAEALEEFGRLHGVAHFAGVA---HSALSWNLPLEAWEKVLRVNLTGSFLVARK 121

Query: 134 VLSGMVERGKGTII 147
               +     G+++
Sbjct: 122 AGEVL--EEGGSLV 133

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 61.4 bits (150), Expect = 5e-12
 Identities = 31/150 (20%), Positives = 50/150 (33%), Gaps = 34/150 (22%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G+  RGI          GR IA+  A     V  ++R         DEI +    +    
Sbjct: 51  GAG-RGI----------GREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYESSGY 98

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------FQ 117
             D S    + E    +L+    V++LV NA             I+ D+         ++
Sbjct: 99  AGDVSKKEEISEVINKILTEHKNVDILVNNA------------GITRDNLFLRMKNDEWE 146

Query: 118 KSIAISSLGAFLCAQQVLSGMVERGKGTII 147
             +  +    F   Q +   M+    G II
Sbjct: 147 DVLRTNLNSLFYITQPISKRMINNRYGRII 176

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 61.0 bits (149), Expect = 5e-12
 Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 17/152 (11%)

Query: 25  GRSIARKFAHEGYTVAI--LARDLGRLSRF-------ADEIAREEKS---QVFAIRIDCS 72
           GRS A + A EG  +    +   +     +        DE AR  +    +     +D  
Sbjct: 28  GRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR 87

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D  ++RE     +   G ++V+V NA            E++ + +   I ++  G +   
Sbjct: 88  DDAALRELVADGMEQFGRLDVVVANAG---VLSWGRVWELTDEQWDTVIGVNLTGTWRTL 144

Query: 132 QQVLSGMVERGK-GTIIFTGCSASLNGIAGFS 162
           +  +  M+E G  G+I+    SA L    G  
Sbjct: 145 RATVPAMIEAGNGGSIVVVSSSAGLKATPGNG 176

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 60.6 bits (148), Expect = 6e-12
 Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 19/151 (12%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           IA + G    +G  I +  + +    A L R+   L+  A+         V  I  D   
Sbjct: 7   IAVVTGATGGMGIEIVKDLSRDHIVYA-LGRNPEHLAALAEIE------GVEPIESDIVK 59

Query: 74  SRSVREAFEGVLSLGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
                   + + +L  V+ LV+ A       +          S   +   + ++ +    
Sbjct: 60  EVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIE-------AGSVAEWHAHLDLNVIVPAE 112

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
            ++Q+L  +     G +I+    A      G
Sbjct: 113 LSRQLLPALRAAS-GCVIYINSGAGNGPHPG 142

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 60.7 bits (148), Expect = 7e-12
 Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
            GR+IA      G TV   AR    L    D++      +  AI +D +D   +      
Sbjct: 17  FGRAIAEAAVAAGDTVIGTARRTEAL----DDLVAAYPDRAEAISLDVTDGERIDVVAAD 72

Query: 84  VLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER 141
           VL+  G V+VLV NA       Q   F E +    +    +   G     + +L  M ER
Sbjct: 73  VLARYGRVDVLVNNAGR----TQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER 128

Query: 142 GKGTIIFTGCSASLNGIAGFS 162
           G G+++           AGFS
Sbjct: 129 GSGSVVNISSFGGQLSFAGFS 149

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 60.4 bits (147), Expect = 7e-12
 Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 21/150 (14%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
            IV G    LG +I   F   GYTV  +          A++ A         +  + + +
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLS-------ANDQADSN----ILVDGNKNWT 54

Query: 75  RSVREAFE---GVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
              +   E     L    V+ +   A         +  ++    +    I  S   + + 
Sbjct: 55  EQEQSILEQTASSLQGSQVDGVFCVAGGWAGG---SASSKDFVKNADLMIKQSVWSSAIA 111

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           A+   + +  +  G +  TG +A++     
Sbjct: 112 AKLATTHL--KPGGLLQLTGAAAAMGPTPS 139

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 60.6 bits (148), Expect = 7e-12
 Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 31/171 (18%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIARE 59
             +M  S      IA + G    +G SI ++   +G+ V      +  R  ++ ++  + 
Sbjct: 6   HHHMVMSQR----IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ-KA 60

Query: 60  EKSQVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEI------- 111
                +A   +  D  S ++AF+ V + +G ++VLV NA             I       
Sbjct: 61  LGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNA------------GITRDVVFR 108

Query: 112 --SFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             + + +Q  I  +    F   +QV+ GMVERG G II     +S+NG  G
Sbjct: 109 KMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINI---SSVNGQKG 156

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 59.6 bits (145), Expect = 9e-12
 Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 27/148 (18%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
             ++G    LG ++  +   +   V    R  G                   + +D ++ 
Sbjct: 6   ILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNI 46

Query: 75  RSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQV 134
            S+++ +E V   G V+ +V       S   +  TE++ +    +I+    G        
Sbjct: 47  DSIKKMYEQV---GKVDAIVSAT---GSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

Query: 135 LSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +  + ++  G+   T      + I   +
Sbjct: 101 IDSLNDK--GSFTLTTGIMMEDPIVQGA 126

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 59.9 bits (146), Expect = 9e-12
 Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 28/158 (17%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G    LGR+ A      GY V +L  DL           R E   +  +  D + 
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVL--DL-----------RREGEDLIYVEGDVTR 50

Query: 74  SRSVREAFEGVLSLGFVEVLVYNA-----YQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
              VR A         +  +V  A      + +  +         +SF++ + ++ LG F
Sbjct: 51  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKE----GPHGLESFRRVLEVNLLGTF 106

Query: 129 LCAQQVLSGMVER------GKGTIIFTGCSASLNGIAG 160
              +     M E        +G I+ T   A+  G  G
Sbjct: 107 NVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG 144

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 59.4 bits (145), Expect = 2e-11
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 46/178 (25%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           GS+ RGI          GR+IA K A  G TV I      R    A+EIA +   +   +
Sbjct: 14  GST-RGI----------GRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGV 62

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------FQ 117
            ++     S+ +AFE + + +  +++LV NA             I+ D          ++
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNA------------GITRDKLFLRMSLLDWE 110

Query: 118 KSIAISSLGAFLCAQQVLSGMVERGKGTII-------FTGC------SASLNGIAGFS 162
           + + ++  G FL  Q  L  M+++  G I+       FTG       S +  G+ GF+
Sbjct: 111 EVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFT 168

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 39/160 (24%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G + RGI          G +IA++ A +G+ VA+  R                   +F +
Sbjct: 22  GGN-RGI----------GLAIAQRLAADGHKVAVTHR------------GSGAPKGLFGV 58

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTE------ISFDSFQKSI 120
            +D +DS +V  AF  V    G VEVLV NA           +       ++ + F+K I
Sbjct: 59  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA---------GLSADAFLMRMTEEKFEKVI 109

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             +  GAF  AQ+    M     G +IF G  + L GI  
Sbjct: 110 NANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN 149

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 24/149 (16%)

Query: 25  GRSIARKFAHEGYTVAIL-------ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSV 77
           GR+++  FA EG  +AI        A +  +          +E  +   +  D SD +  
Sbjct: 60  GRAVSIAFAKEGANIAIAYLDEEGDANETKQY-------VEKEGVKCVLLPGDLSDEQHC 112

Query: 78  REAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           ++  +  +  LG + +LV N   Q   +       I+ +  +K+  I+    F   +  L
Sbjct: 113 KDIVQETVRQLGSLNILVNNVAQQ---YPQQGLEYITAEQLEKTFRINIFSYFHVTKAAL 169

Query: 136 SGMVERGKGTIIFTGCSASLNGIAGFSEL 164
           S + ++G   II T   AS+    G   L
Sbjct: 170 SHL-KQG-DVIINT---ASIVAYEGNETL 193

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 29/153 (18%), Positives = 60/153 (39%), Gaps = 25/153 (16%)

Query: 25  GRSIARKFAHEGYTVAI--LARDLGRLSRF------ADEIAREEKS---QVFAIRIDCSD 73
           GR+ A + A +G  +    L   +  +              +  +    ++ A + D  D
Sbjct: 26  GRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD 85

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
             S+  A +  L  LG ++++V NA   P+            D +   I ++  G +   
Sbjct: 86  RESLSAALQAGLDELGRLDIVVANAGIAPM--------SAGDDGWHDVIDVNLTGVYHTI 137

Query: 132 QQVLSGMVERGK-GTIIFTGCSASLNGIAGFSE 163
           +  +  +V++G  G+I+     +S  G+AG   
Sbjct: 138 KVAIPTLVKQGTGGSIVLI---SSSAGLAGVGS 167

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 38/164 (23%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFA 66
           G    G+          G +I+R+    G  VA+  +     +S +     R+      A
Sbjct: 32  GGM-GGL----------GAAISRRLHDAGMAVAVSHSERNDHVSTWLMHE-RDAGRDFKA 79

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEI---------SFDSF 116
             +D +D  S     E VL+  G V+VL+ NA             I         +   +
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLINNA------------GITRDATFMKMTKGDW 127

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
              +       F   +Q ++GMVER  G I+      S+NG  G
Sbjct: 128 DAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNI---GSVNGSRG 168

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 34/150 (22%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G+S RGI          GR+IA + A  G  V   A              ++   +    
Sbjct: 35  GAS-RGI----------GRAIALELARRGAMVIGTATTEAGAEGIGAAF-KQAGLEGRGA 82

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------FQ 117
            ++ +D+ +V    E  L   G + VLV NA             I+ D          + 
Sbjct: 83  VLNVNDATAVDALVESTLKEFGALNVLVNNA------------GITQDQLAMRMKDDEWD 130

Query: 118 KSIAISSLGAFLCAQQVLSGMVERGKGTII 147
             I  +    F  ++ VL  M++   G I+
Sbjct: 131 AVIDTNLKAVFRLSRAVLRPMMKARGGRIV 160

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 59.1 bits (144), Expect = 3e-11
 Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 45/163 (27%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G + RGI          G +IAR FA  G  VAI  R            + E      A+
Sbjct: 28  GGN-RGI----------GLAIARAFADAGDKVAITYR------------SGEPPEGFLAV 64

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------FQ 117
           + D +D+  V +A++ +    G VEVL+ NA             ++ D          F 
Sbjct: 65  KCDITDTEQVEQAYKEIEETHGPVEVLIANA------------GVTKDQLLMRMSEEDFT 112

Query: 118 KSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             +  +  G F   ++    M+   KG ++       L G AG
Sbjct: 113 SVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG 155

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 59.6 bits (144), Expect = 3e-11
 Identities = 21/193 (10%), Positives = 57/193 (29%), Gaps = 29/193 (15%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
           M     +  + R  A + G    +G  I ++ +  G  V +  RD+ +     +++    
Sbjct: 1   MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60

Query: 61  KSQVFAIRID-CSDSRSVREAFEGVLS-LGFVEVLVYNA--------------------- 97
              V   ++D      ++    + + +  G +++LV NA                     
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120

Query: 98  ------YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC 151
                       +       +++  ++ + I+  G     + ++  +       I+    
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSS 180

Query: 152 SASLNGIAGFSEL 164
           S            
Sbjct: 181 STGSLKYVSNETA 193

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 58.7 bits (143), Expect = 3e-11
 Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 41/175 (23%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G+S RGI          G  +A   A +G TV   A       +F + + +E+  +   +
Sbjct: 12  GAS-RGI----------GFEVAHALASKGATVVGTATSQASAEKFENSM-KEKGFKARGL 59

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTE------ISFDSFQKSI 120
            ++ SD  S++  F  + +    +++LV NA           T       +S D +Q  I
Sbjct: 60  VLNISDIESIQNFFAEIKAENLAIDILVNNA---------GITRDNLMMRMSEDEWQSVI 110

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTII-------FTGC------SASLNGIAGFS 162
             +    F  +++ + GM+++  G II         G        A+  G+ GFS
Sbjct: 111 NTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFS 165

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 58.4 bits (142), Expect = 6e-11
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 34/165 (20%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAI--LARDLGRLSRF------ADEIAREEKS- 62
           RG           GRS A K A EG  + +  +  D+             +E   E +  
Sbjct: 20  RGQ----------GRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT 69

Query: 63  --QVFAIRIDCSDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQK 118
             + +   +D  D  +V       ++  G ++V+V NA   P+         +   +F  
Sbjct: 70  GRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGA------HLPVQAFAD 123

Query: 119 SIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE 163
           +  +  +G        L  +       II TG   S+ G+   ++
Sbjct: 124 AFDVDFVGVINTVHAALPYLTSGAS--IITTG---SVAGLIAAAQ 163

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 57.5 bits (140), Expect = 7e-11
 Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 50/178 (28%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G+S RGI          G++IA   A  G  V   A         A  I+         +
Sbjct: 16  GAS-RGI----------GKAIAELLAERGAKVIGTATSESG----AQAISDYLGDNGKGM 60

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------FQ 117
            ++ ++  S+    + +    G V++LV NA             I+ D+         + 
Sbjct: 61  ALNVTNPESIEAVLKAITDEFGGVDILVNNA------------GITRDNLLMRMKEEEWS 108

Query: 118 KSIAISSLGAFLCAQQVLSGMVERGKGTII-------FTGC------SASLNGIAGFS 162
             +  +    F  ++ VL GM+++ +G II         G       +A+  G+ GF+
Sbjct: 109 DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFT 166

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 57.1 bits (139), Expect = 1e-10
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 35/151 (23%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           GSS RG+          G++IA K  + G  + +  +     L   A+E  +     V  
Sbjct: 12  GSS-RGL----------GKAIAWKLGNMGANIVLNGSPASTSLDATAEEF-KAAGINVVV 59

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------F 116
            + D  +   V    +  +   G +++LV NA             I+ D+         +
Sbjct: 60  AKGDVKNPEDVENMVKTAMDAFGRIDILVNNA------------GITRDTLMLKMSEKDW 107

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTII 147
              +  +   A+LC + V   M+++  G II
Sbjct: 108 DDVLNTNLKSAYLCTKAVSKIMLKQKSGKII 138

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 38/164 (23%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+S RGI          GR+IA + A  G  VA+  A   G        IA     + FA
Sbjct: 35  GAS-RGI----------GRAIALELAAAGAKVAVNYASSAGAADEVVAAIA-AAGGEAFA 82

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------F 116
           ++ D S    V   F  V+   G ++VLV NA             I+ D+         +
Sbjct: 83  VKADVSQESEVEALFAAVIERWGRLDVLVNNA------------GITRDTLLLRMKRDDW 130

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           Q  + ++  G FLC++     M+++  G II     AS+ G  G
Sbjct: 131 QSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINI---ASVVGEMG 171

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 44/175 (25%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G++  GI          G +IAR F  +G  V +      +      EIA +    VF  
Sbjct: 34  GAT-GGI----------GEAIARCFHAQGAIVGLHGTREDK----LKEIAADLGKDVFVF 78

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTE------ISFDSFQKSI 120
             + SD +S+++  E     +  +++LV NA           T       +    +   +
Sbjct: 79  SANLSDRKSIKQLAEVAEREMEGIDILVNNA---------GITRDGLFVRMQDQDWDDVL 129

Query: 121 AISSLGAFLCAQQVLSGMVERGKGTII-------FTGC------SASLNGIAGFS 162
           A++   A    ++++  M+ R  G II         G        A+  G+ GFS
Sbjct: 130 AVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFS 184

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 25/163 (15%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+S RGI          GR+IA++ A++G  VAI              EI +      F+
Sbjct: 14  GAS-RGI----------GRAIAKRLANDGALVAIHYGNRKEEAEETVYEI-QSNGGSAFS 61

Query: 67  IRIDCSDSRSVREAFEGVL-------SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKS 119
           I  +      V   +  +             ++L+ NA            E +   F + 
Sbjct: 62  IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNA---GIGPGAFIEETTEQFFDRM 118

Query: 120 IAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +++++   F   QQ LS + +  +  II    +A+   +  F 
Sbjct: 119 VSVNAKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFI 159

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 56.7 bits (138), Expect = 2e-10
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 35/151 (23%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+S RGI          GRSIA + A EGY VA+  A    +     +EI + +    FA
Sbjct: 11  GAS-RGI----------GRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFA 58

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------F 116
           I+ + +D+  V+   + V+S  G ++VLV NA             I+ D+         +
Sbjct: 59  IQANVADADEVKAMIKEVVSQFGSLDVLVNNA------------GITRDNLLMRMKEQEW 106

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTII 147
              I  +  G F C Q+    M+ +  G II
Sbjct: 107 DDVIDTNLKGVFNCIQKATPQMLRQRSGAII 137

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 56.3 bits (137), Expect = 2e-10
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 35/151 (23%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+S RGI          GR+IA   A +G  V +  A +  + +   DEI ++  S   A
Sbjct: 11  GAS-RGI----------GRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI-KKLGSDAIA 58

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------F 116
           +R D +++  V    +  +   G V++LV NA             ++ D+         +
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILVNNA------------GVTKDNLLMRMKEEEW 106

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTII 147
              I  +  G FLC + V   M+ +  G I+
Sbjct: 107 DTVINTNLKGVFLCTKAVSRFMMRQRHGRIV 137

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 56.3 bits (137), Expect = 2e-10
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 35/151 (23%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+S RGI          G++IA      G  V +  AR        + +I      Q   
Sbjct: 8   GAS-RGI----------GKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYGGQAIT 55

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------F 116
              D S    V    +  +   G ++V+V NA             I+ D+         +
Sbjct: 56  FGGDVSKEADVEAMMKTAIDAWGTIDVVVNNA------------GITRDTLLIRMKKSQW 103

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTII 147
            + I ++  G FLC Q     M+++ KG II
Sbjct: 104 DEVIDLNLTGVFLCTQAATKIMMKKRKGRII 134

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 16/148 (10%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRF----ADEIAREEKSQVFAIRIDCSDSRSVRE 79
            GR  A   A  G+ V    RD+   +          AR+    +  + +D     SV  
Sbjct: 17  FGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDR 76

Query: 80  AFEGVLS-LGFVEVLVYNA----YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQV 134
           A + ++   G ++VL++NA    + P           + + F +   I+ L      +  
Sbjct: 77  AIDQIIGEDGRIDVLIHNAGHMVFGPAE-------AFTPEQFAELYDINVLSTQRVNRAA 129

Query: 135 LSGMVERGKGTIIFTGCSASLNGIAGFS 162
           L  M  +  G +I+   S+S  G   + 
Sbjct: 130 LPHMRRQKHGLLIWISSSSSAGGTPPYL 157

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 56.0 bits (136), Expect = 3e-10
 Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 41/158 (25%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA------REEK 61
           G+   GI          GR+++ + A EG TVA    D          +          +
Sbjct: 14  GAG-SGI----------GRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 62  SQVFAIRIDCSDSRSVREAFEGVLSL--GFVEVLVYNAYQPVSWQPTNFTEISFDS---- 115
               A + D S++R+ R   E V +       V+V  A             I+ D     
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA------------GITQDEFLLH 110

Query: 116 -----FQKSIAISSLGAFLCAQQVLSGMVE-RGKGTII 147
                + K IA++  G FL  Q     +V    +G+II
Sbjct: 111 MSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSII 148

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 55.2 bits (134), Expect = 6e-10
 Identities = 29/151 (19%), Positives = 58/151 (38%), Gaps = 34/151 (22%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G+S RGI          GR+IA + A +G+ +AI   ++  +    A+E  R     V  
Sbjct: 8   GAS-RGI----------GRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAV 56

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDS---------F 116
           +  +  ++ +           LG ++ LV NA             I+ D+         +
Sbjct: 57  LGANLLEAEAATALVHQAAEVLGGLDTLVNNA------------GITRDTLLVRMKDEDW 104

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTII 147
           +  +  +    F   ++ +  M++   G I+
Sbjct: 105 EAVLEANLSAVFRTTREAVKLMMKARFGRIV 135

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 20/154 (12%), Positives = 40/154 (25%), Gaps = 11/154 (7%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
            + AI G    +G ++    A  G+TV  + R    +    +        +  A+     
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI----EADLSTPGGRETAVAAVLD 57

Query: 73  DSRSVREA------FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
               V +            +   + V V       +        +S      ++ + S+ 
Sbjct: 58  RCGGVLDGLVCCAGVGVTAANSGLVVAVNYFG-VSALLDGLAEALSRGQQPAAVIVGSIA 116

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           A       L  +     G        A   G   
Sbjct: 117 ATQPGAAELPMVEAMLAGDEARAIELAEQQGQTH 150

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 31/174 (17%), Positives = 53/174 (30%), Gaps = 46/174 (26%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G+S  GI          G +IAR     G  V I   +  +       +    K      
Sbjct: 21  GAS-SGI----------GSAIARLLHKLGSKVIISGSNEEK----LKSLGNALKDNYTIE 65

Query: 68  RIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTE------ISFDSFQKSIA 121
             + ++                +++LV NA           T       +    F K I 
Sbjct: 66  VCNLANKEECSNLIS---KTSNLDILVCNA---------GITSDTLAIRMKDQDFDKVID 113

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTII-------FTGC------SASLNGIAGFS 162
           I+    F+  ++ +  M+++  G II         G        AS  G+ G +
Sbjct: 114 INLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMT 167

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 11/162 (6%)

Query: 1   MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE 60
             +   + S    +  I G G  LG+  A+ FA  G  V +   D    ++  DEI +  
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV--NDFKDATKTVDEI-KAA 367

Query: 61  KSQVFAIRIDCSDS--RSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQK 118
             + +  + D +      ++   +     G +++LV NA      +  +F ++S   +  
Sbjct: 368 GGEAWPDQHDVAKDSEAIIKNVID---KYGTIDILVNNA---GILRDRSFAKMSKQEWDS 421

Query: 119 SIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
              +  +G F  ++      VE+  G II    ++ + G  G
Sbjct: 422 VQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG 463

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 47.0 bits (112), Expect = 8e-07
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 24/159 (15%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAILARDLGRL-------SRFADEIAREEKS---QV 64
            I+ G G  LG+  + +FA  G  V +   DLG         S+ AD +  E        
Sbjct: 11  VIITGAGGGLGKYYSLEFAKLGAKVVV--NDLGGALNGQGGNSKAADVVVDEIVKNGGVA 68

Query: 65  FAIRIDCSDSRS-VREAFEGVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIA 121
            A   +  D    V  A +   + G V V++ NA   +  S       +++   ++  I 
Sbjct: 69  VADYNNVLDGDKIVETAVK---NFGTVHVIINNAGILRDAS-----MKKMTEKDYKLVID 120

Query: 122 ISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           +   GAF   +       ++  G I+ T   A L G  G
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG 159

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 25/191 (13%), Positives = 57/191 (29%), Gaps = 47/191 (24%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G++ + +          GRSIA     EGY V +   R     +  +  +     +    
Sbjct: 53  GAA-KRL----------GRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 67  IRIDCSDSRS-----------------VREAFEGVLS-LGFVEVLVYNA--YQPV----- 101
           ++ D S+  +                   E      +  G  +VLV NA  + P      
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161

Query: 102 ---SWQPTNFTEISFDSFQKS-IAISSLGAFLCAQQVLSGMVERG------KGTIIFTGC 151
                +P      + ++        +++  +   +     +            +II    
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 152 SASLNGIAGFS 162
           + +   + G++
Sbjct: 222 AMTNQPLLGYT 232

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 50.4 bits (121), Expect = 4e-08
 Identities = 26/191 (13%), Positives = 56/191 (29%), Gaps = 47/191 (24%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFA 66
           G++ + +          GRSIA     EGY V +   R     +  +  +     +    
Sbjct: 16  GAA-KRL----------GRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 67  IRIDCSDSRS-----------------VREAFEGVLS-LGFVEVLVYNA----YQPV--- 101
           ++ D S+  +                   E      +  G  +VLV NA      P+   
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 102 ---SWQPT-NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG------KGTIIFTGC 151
                +P     E    +       +++  +   +     +            +II    
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 152 SASLNGIAGFS 162
           + +   + G++
Sbjct: 185 AMTNQPLLGYT 195

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 14/144 (9%)

Query: 24  LGRSIARKFAHE---GYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVR 78
           +G  +A + A +    + V    RDL    R  +           +  +++D  DS+SV 
Sbjct: 14  IGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVA 73

Query: 79  EAFEGVLSLGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSG 137
            A E V   G V+VLV NA              +  D+    + ++ +G     Q  L  
Sbjct: 74  AARERVTE-GRVDVLVCNAGLG----LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPD 128

Query: 138 MVERGKGTIIFTGCSASLNGIAGF 161
           M  RG G ++ TG   S+ G+ G 
Sbjct: 129 MKRRGSGRVLVTG---SVGGLMGL 149

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 49.3 bits (118), Expect = 9e-08
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 6/114 (5%)

Query: 24  LGRSIARKFA-HEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFE 82
           +G +I R         V + ARD+ R      ++ + E       ++D  D +S+R   +
Sbjct: 16  IGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL-QAEGLSPRFHQLDIDDLQSIRALRD 74

Query: 83  GVLSL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
            +    G ++VLV NA   ++++  + T       + ++  +  G      ++L
Sbjct: 75  FLRKEYGGLDVLVNNA--GIAFKVADPTP-FHIQAEVTMKTNFFGTRDVCTELL 125

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 36/164 (21%), Positives = 58/164 (35%), Gaps = 41/164 (25%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           G++ RGI          G +IA  FA +G TV  +  D        D     +K    A+
Sbjct: 220 GAA-RGI----------GATIAEVFARDGATVVAIDVDGAA----EDLKRVADKVGGTAL 264

Query: 68  RIDCSDSRSVREAFEGVLS--LGFVEVLVYNAYQPVSWQPTNFTEI---------SFDSF 116
            +D +   +V +    V     G V++LV NA             I             +
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNA------------GITRDKLLANMDEKRW 312

Query: 117 QKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
              IA++ L      + ++        G +I     +S+ GIAG
Sbjct: 313 DAVIAVNLLAPQRLTEGLVGNGTIGEGGRVI---GLSSMAGIAG 353

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +G  + ++   +     I+A    R    A E+   + S+V  + +  + 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIAT--ARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 74  SRSVREAFEGV---LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
            +S+      V   +    + +L+ NA   V       TE +     + + +++    L 
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNA--GVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            Q++L  +++           S S   +   S
Sbjct: 121 TQKLLP-LLKNAASKESGDQLSVSRAAVITIS 151

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 20/157 (12%)

Query: 16  AIV-GVGPNLGRSIARKFAHEGYTVAI-----LARDLGRLSRFADEIAREEKS---QVFA 66
            +V G G  LGR+ A  FA  G  V +       + +G+ S  AD++  E +    +  A
Sbjct: 12  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 71

Query: 67  IRIDCSDSRS-VREAFEGVLSLGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAIS 123
                      V+ A +   + G ++V+V NA   +  S     F+ IS + +     + 
Sbjct: 72  NYDSVEAGEKLVKTALD---TFGRIDVVVNNAGILRDRS-----FSRISDEDWDIIQRVH 123

Query: 124 SLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
             G+F   +     M ++  G II T  ++ + G  G
Sbjct: 124 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG 160

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 46.4 bits (110), Expect = 8e-07
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A ++     +G   A   A EG  V +  R L +    AD + +  K  V A   + +D 
Sbjct: 122 AVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA--AETADD 179

Query: 75  RSVREAFEGV 84
            S  EA +G 
Sbjct: 180 ASRAEAVKGA 189

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 46.7 bits (111), Expect = 9e-07
 Identities = 45/171 (26%), Positives = 66/171 (38%), Gaps = 22/171 (12%)

Query: 4   MTSSGSSCR--GIAAIV-GVGPNLGRSIARKFAHEGYTVAI--LARDL---GRLSRFADE 55
           M+SS    R  G  A+V G G  LGR  A  FA  G  V +  L       G   R AD 
Sbjct: 8   MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI 67

Query: 56  IAREEKS---QVFAIRIDCSDSRS-VREAFEGVLSLGFVEVLVYNA--YQPVSWQPTNFT 109
           +  E +    +  A      D    +  A +   + G V++LV NA   +  S       
Sbjct: 68  VVDEIRKAGGEAVADYNSVIDGAKVIETAIK---AFGRVDILVNNAGILRDRS-----LV 119

Query: 110 EISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG 160
           + S   +     +   G+F C Q     M ++  G II T  ++ + G  G
Sbjct: 120 KTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG 170

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 5/81 (6%)

Query: 4  MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ 63
          M  +G   +    I G    +G  + +     G+   +  R     S     +   +   
Sbjct: 5  MEENGMKSK--ILIFGGTGYIGNHMVKGSLKLGHPTYVFTR---PNSSKTTLLDEFQSLG 59

Query: 64 VFAIRIDCSDSRSVREAFEGV 84
             ++ +  +   + E  + V
Sbjct: 60 AIIVKGELDEHEKLVELMKKV 80

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 1/82 (1%)

Query: 4  MT-SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS 62
          MT S   S +G   I G    +G+ +A           ILAR   R    A      E  
Sbjct: 1  MTVSPVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDK 60

Query: 63 QVFAIRIDCSDSRSVREAFEGV 84
              +    ++  ++ +  +  
Sbjct: 61 GAIIVYGLINEQEAMEKILKEH 82

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 30/139 (21%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  I G    +G +  +     G+ +  +                        +  D S 
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA------------------EVIADLST 44

Query: 74  SRSVREAFEGVLS--LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           +   ++A   VL+     ++ LV  A                      ++++  GA    
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCA----------GLGPQTKVLGNVVSVNYFGATELM 94

Query: 132 QQVLSGMVERGKGTIIFTG 150
              L  + +  +   +   
Sbjct: 95  DAFLPALKKGHQPAAVVIS 113

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 24  LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG 83
           LG   AR+ A  G TV +  RD  +     +  AR    QV    +D  D  SVR   +G
Sbjct: 28  LGAVTARELARRGATVIMAVRDTRK----GEAAARTMAGQVEVRELDLQDLSSVRRFADG 83

Query: 84  VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER 141
           V      +VL+ NA   +   P   T    D F+  I  + LG F     +L  + +R
Sbjct: 84  VSGA---DVLINNA--GIMAVPYALTV---DGFESQIGTNHLGHFALTNLLLPRLTDR 133

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 4  MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA 57
          +T   S  +G+  I G G + G+S+  K    GY+V   +R+    S       
Sbjct: 11 LTVDSSEKQGVVCIFGTG-DFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAE 63

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAR 58
           I+G G +  RS+A +    G+ V + +R+  R +R     A+
Sbjct: 32 GILGSG-DFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQ 73

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 41.0 bits (96), Expect = 6e-05
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 16 AIVGVGPNLGRSIARKFAHEGYTVAILARD--LGRLSRFADEIAREEKSQVFAIRIDCSD 73
           ++G    +GR +A+     G+   +L R+      S  A  +   + S    +     D
Sbjct: 8  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD 67

Query: 74 SRSVREAFEGV 84
            S+ EA + V
Sbjct: 68 HASLVEAVKNV 78

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 40/179 (22%), Positives = 58/179 (32%), Gaps = 24/179 (13%)

Query: 1   MRNMTSSGSSCRGIAAIV-GVGPNLGRSIARKFAHEGYTVAI------LARDLGRLSRFA 53
                 S     G   IV G G  +GR+ A  FA EG  V +      L          A
Sbjct: 15  QTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAA 74

Query: 54  DEIAREEKS---QVFAIRIDCSDSRSVREAFEGVL-SLGFVEVLVYNA--YQPVSWQPTN 107
             +  E  +   +  A   + +D        +  + + G ++VLV NA   +        
Sbjct: 75  QSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRM----- 129

Query: 108 FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK------GTIIFTGCSASLNGIAG 160
               S + F   IA+   G F   +   +      K      G II T   A L G  G
Sbjct: 130 IANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG 188

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 40.7 bits (95), Expect = 8e-05
 Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ-VFAIRIDCSDS 74
           IVG    +G+ I       G+   +L R     +    ++    K      I     D 
Sbjct: 8  LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH 67

Query: 75 RSVREAFEGV 84
          + + +A + V
Sbjct: 68 QRLVDALKQV 77

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAR 58
          A++G   NLG+ +A + A  G+ + + +R   +    A E  R
Sbjct: 4  ALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR 46

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Length = 245

 Score = 38.1 bits (88), Expect = 5e-04
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS 62
          A++G G  +GR++A   A  G+ V I  RD       A+  A     
Sbjct: 23 AVLGTG-TVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPP 68

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSD 73
           I G    +G+ + R      +   I AR L   S  +    REE     V  I  +  +
Sbjct: 8  IIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE 67

Query: 74 SRSVREAFEGV 84
             +    + V
Sbjct: 68 HEKMVSVLKQV 78

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 16 AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQ---VFAIRIDCS 72
           I+G    +GR I       G     L R     +    +    +  Q   V  +  D +
Sbjct: 6  LILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIN 65

Query: 73 DSRSVREAFEGV 84
          D  ++ +A + V
Sbjct: 66 DHETLVKAIKQV 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	167
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.98
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.98
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.98
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.98
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.98
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.98
1spx_A	278	Short-chain reductase family member (5L265); paral	99.98
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.98
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.98
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.98
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.98
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.98
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.98
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.98
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.97
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.97
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.97
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.97
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.97
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.97
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.97
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.97
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.97
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.97
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.97
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.97
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.97
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.97
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.97
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.97
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.97
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.97
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.97
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.97
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.97
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.97
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.97
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.97
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.97
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.97
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.97
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.96
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.96
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.96
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.96
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.96
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.96
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.96
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.96
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.96
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.96
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.96
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.96
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.95
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.95
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.95
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.95
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.95
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.94
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.94
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.94
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.94
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.94
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.91
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.9
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.87
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.86
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.85
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.82
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.82
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.8
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.79
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.79
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.79
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.78
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.78
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.78
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.78
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.77
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.77
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.77
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.77
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.77
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.76
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.76
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.76
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.76
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.75
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.75
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.74
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.74
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.74
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.73
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.73
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.73
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.73
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.72
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.72
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.71
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.71
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.71
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.71
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.71
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.7
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.7
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.69
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.68
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.68
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.68
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.68
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.67
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.67
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.67
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.67
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.66
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.66
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.66
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.66
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.66
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.66
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.65
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.64
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.62
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.62
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.62
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.61
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.61
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.6
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.59
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.59
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.58
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.57
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.57
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.54
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.53
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.53
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.53
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.53
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.52
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.51
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.51
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.49
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.48
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.45
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.43
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.43
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.41
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.41
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.4
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.32
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.32
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.32
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.32
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.31
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.29
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.19
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.16
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.13
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.02
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.98
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.97
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.97
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.96
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.81
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.81
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.79
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.78
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.76
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.75
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.75
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.74
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.66
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.6
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.58
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.56
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.55
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.52
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.49
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.46
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.46
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.44
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.44
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.41
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.36
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.32
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.32
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.31
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.31
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.31
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.29
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.24
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.22
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.16
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.15
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.15
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.14
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.14
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	98.13
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.08
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.05
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.03
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.02
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.01
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.01
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.01
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.0
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.96
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.94
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.87
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.87
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.86
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.85
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.84
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.8
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.8
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.77
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.71
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.7
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.7
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.7
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.69
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.68
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.68
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.68
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.66
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.64
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.63
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.62
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.62
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.58
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.58
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.56
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.56
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.56
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.56
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.54
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.54
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.47
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.47
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.44
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.39
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.39
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.38
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.38
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.38
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.37
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.36
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.35
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.34
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.33
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.32
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.32
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.32
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.32
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.32
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.3
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.29
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.25
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.23
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.23
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.22
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.22
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.2
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.19
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.18
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.18
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.18
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.15
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.14
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.13
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.11
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.11
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.1
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.06
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.05
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.04
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.02
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.01
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.98
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.95
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.94
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.93
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.93
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.92
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.9
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.86
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.82
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.79
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.76
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.76
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.75
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.72
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.67
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.66
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.65
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.64
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.59
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.59
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.58
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.56
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.56
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.56
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.55
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.54
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.53
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.52
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.51
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.48
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.48
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.47
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.46
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.43
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.42
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.42
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.41
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.41
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.41
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.39
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.39
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.37
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.35
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.32
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.32
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.32
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.31
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.28
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.28
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.24
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.22
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.21
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.19
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.17
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.16
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.15
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.15
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.14
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.14
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.13
1lnq_A	336	MTHK channels, potassium channel related protein;	96.12

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.3e-40  Score=244.40  Aligned_cols=157  Identities=24%  Similarity=0.332  Sum_probs=148.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||+++|++|+++|++|++.+|+++.++++.++++. .+.++.++.+|++|+++++++++++. +
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-MGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999999987 78899999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|+||+||||||+  ..+..++.+.+.|+|++++++|+.++|+++|+++|+|++++.|+||||||.++..+.++..+|++
T Consensus        82 ~G~iDiLVNNAGi--~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~a  159 (254)
T 4fn4_A           82 YSRIDVLCNNAGI--MDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTV  159 (254)
T ss_dssp             HSCCCEEEECCCC--CCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHH
T ss_pred             cCCCCEEEECCcc--cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHH
Confidence            9999999999997  12457899999999999999999999999999999999999999999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       160 s  160 (254)
T 4fn4_A          160 A  160 (254)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=7.2e-40  Score=242.71  Aligned_cols=156  Identities=21%  Similarity=0.243  Sum_probs=148.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||+++|++|+++|++|++.+|+++.+++..++++. .+.++..+.+|++|+++++++++++. +
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-KGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999999988 78899999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +|+||+||||||+   ....++.+.+.|+|++++++|+.++|+++|.++|+|.++ +.|+||++||..+..+.|+..+|+
T Consensus        84 ~G~iDiLVNNAG~---~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~  160 (255)
T 4g81_D           84 GIHVDILINNAGI---QYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT  160 (255)
T ss_dssp             TCCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHH
T ss_pred             CCCCcEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHH
Confidence            9999999999999   788999999999999999999999999999999999765 569999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       161 as  162 (255)
T 4g81_D          161 AA  162 (255)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.9e-37  Score=229.44  Aligned_cols=150  Identities=23%  Similarity=0.325  Sum_probs=140.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++    +.+...+.+|++|+++++++++++. ++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999998888777664    5678899999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||+||||||.   ....++.+.+.|+|++++++|+.++|+++|+++|+|++  .|+||++||..+..+.|++.+|++|
T Consensus       102 G~iDiLVNNAG~---~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~as  176 (273)
T 4fgs_A          102 GRIDVLFVNAGG---GSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAAS  176 (273)
T ss_dssp             SCEEEEEECCCC---CCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHH
Confidence            999999999999   78899999999999999999999999999999999965  4799999999999999999999875

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.5e-37  Score=227.49  Aligned_cols=154  Identities=21%  Similarity=0.252  Sum_probs=137.1

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      |+.+++++||+++||||++|||+++|++|+++|++|++.+|+..  ++..+.++. .+.++..+.+|++|+++++++++ 
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~-   76 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAK-DGGNASALLIDFADPLAAKDSFT-   76 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHH-TTCCEEEEECCTTSTTTTTTSST-
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHH-
Confidence            34456789999999999999999999999999999999999754  455666666 77889999999999988876554 


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcc
Q 031016           84 VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~  162 (167)
                         +++||+||||||+   ....++.+.+.|+|++++++|+.++|+++|+++|+|.+++ .|+||||||..+..+.++..
T Consensus        77 ---~g~iDiLVNNAGi---~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~  150 (247)
T 4hp8_A           77 ---DAGFDILVNNAGI---IRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVP  150 (247)
T ss_dssp             ---TTCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCH
T ss_pred             ---hCCCCEEEECCCC---CCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCCh
Confidence               5899999999999   7888999999999999999999999999999999998875 69999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      +|++|
T Consensus       151 ~Y~as  155 (247)
T 4hp8_A          151 SYTAA  155 (247)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.3e-36  Score=222.93  Aligned_cols=147  Identities=18%  Similarity=0.296  Sum_probs=136.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++||||++|||+++|++|+++|++|++++|+++.+.++.+     ...++.++.+|++|+++++++++++. ++|+|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-----ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-----TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5999999999999999999999999999999999877665443     35578999999999999999999999 99999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||||||.   ....++.+.+.|+|++++++|+.++|+++|.+.|.|.+++ |+||++||..+..+.|+..+|++|
T Consensus        77 DiLVNNAG~---~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~as  149 (247)
T 3ged_A           77 DVLVNNACR---GSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASA  149 (247)
T ss_dssp             CEEEECCCC---CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHH
Confidence            999999999   7888999999999999999999999999999999998764 999999999999999999999975

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=7.1e-36  Score=221.90  Aligned_cols=153  Identities=18%  Similarity=0.276  Sum_probs=137.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++||||++|||+++|++|+++|++|++.+|+.+..+ ..+.+.. .+.++.++.+|++|+++++++++++. +
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQ-RQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHh-cCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999877644 3445555 67789999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|+||+||||||+   ....+ .+.+.|+|++.+++|+.++|+++|.++|+|+++ +|+||+|||..+..+.|+..+|++
T Consensus        81 ~G~iDiLVNnAGi---~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~a  155 (258)
T 4gkb_A           81 FGRLDGLVNNAGV---NDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCA  155 (258)
T ss_dssp             HSCCCEEEECCCC---CCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHH
T ss_pred             hCCCCEEEECCCC---CCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHH
Confidence            9999999999998   44444 478999999999999999999999999999765 499999999999999999999997


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       156 s  156 (258)
T 4gkb_A          156 S  156 (258)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.3e-34  Score=215.10  Aligned_cols=156  Identities=20%  Similarity=0.293  Sum_probs=146.0

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.++. .+.++.++.+|++|+++++++++++. 
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-AGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999999999888877 77889999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||.   ....++ +.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|+
T Consensus        86 ~~g~id~lv~nAg~---~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  161 (256)
T 3gaf_A           86 QFGKITVLVNNAGG---GGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYG  161 (256)
T ss_dssp             HHSCCCEEEECCCC---CCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HcCCCCEEEECCCC---CCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHH
Confidence            89999999999998   666677 88999999999999999999999999999998889999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       162 as  163 (256)
T 3gaf_A          162 SS  163 (256)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.1e-34  Score=215.00  Aligned_cols=154  Identities=26%  Similarity=0.408  Sum_probs=145.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.++++. .+.++.++.+|++|+++++++++++. + 
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA-AGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            45789999999999999999999999999999999999999999998887 67899999999999999999999999 8 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        82 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (252)
T 3h7a_A           82 APLEVTIFNVGA---NVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASA  158 (252)
T ss_dssp             SCEEEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHH
T ss_pred             CCceEEEECCCc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHH
Confidence            999999999999   67788999999999999999999999999999999999888999999999999999999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-34  Score=216.29  Aligned_cols=154  Identities=23%  Similarity=0.338  Sum_probs=145.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.++++. .+.++.++.+|++|+++++++++++. ++|
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD-AGGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3589999999999999999999999999999999999999999988877 67789999999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||+   ....++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        81 ~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  156 (264)
T 3tfo_A           81 RIDVLVNNAGV---MPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCAT  156 (264)
T ss_dssp             CCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHH
Confidence            99999999999   77789999999999999999999999999999999998888999999999999999999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=3.7e-34  Score=212.15  Aligned_cols=165  Identities=19%  Similarity=0.260  Sum_probs=148.0

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeec--CCHHHHH
Q 031016            1 MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC--SDSRSVR   78 (167)
Q Consensus         1 ~~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~~~~~   78 (167)
                      |........+++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+....+.++.++.+|+  +++++++
T Consensus         1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   80 (252)
T 3f1l_A            1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQ   80 (252)
T ss_dssp             CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHH
T ss_pred             CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHH
Confidence            34333445578999999999999999999999999999999999999999888888764555788999999  9999999


Q ss_pred             HHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           79 EAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        79 ~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ++++++. +++++|++|||||.  .....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~  158 (252)
T 3f1l_A           81 QLAQRIAVNYPRLDGVLHNAGL--LGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG  158 (252)
T ss_dssp             HHHHHHHHHCSCCSEEEECCCC--CCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHhCCCCCEEEECCcc--CCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC
Confidence            9999999 89999999999998  12446888999999999999999999999999999999988899999999999999


Q ss_pred             CCCccccccC
Q 031016          158 IAGFSELCKN  167 (167)
Q Consensus       158 ~~~~~~y~as  167 (167)
                      .+++..|++|
T Consensus       159 ~~~~~~Y~as  168 (252)
T 3f1l_A          159 RANWGAYAAS  168 (252)
T ss_dssp             CTTCHHHHHH
T ss_pred             CCCCchhHHH
Confidence            9999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=8.7e-35  Score=215.11  Aligned_cols=155  Identities=19%  Similarity=0.266  Sum_probs=143.1

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ..+.+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+..    +...+.+|++|+++++++++++.
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHH
Confidence            33556899999999999999999999999999999999999888887776643    57889999999999999999999


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                       +++++|++|||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|
T Consensus        79 ~~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  155 (248)
T 3op4_A           79 DEFGGVDILVNNAGI---TRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANY  155 (248)
T ss_dssp             HHHCCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHcCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHH
Confidence             89999999999999   67788999999999999999999999999999999998888999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       156 ~as  158 (248)
T 3op4_A          156 AAA  158 (248)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.2e-34  Score=214.73  Aligned_cols=157  Identities=19%  Similarity=0.232  Sum_probs=145.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.... +.++.++.+|++|+++++++++++. 
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999888888887633 3359999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|+
T Consensus        84 ~~g~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T 3lf2_A           84 TLGCASILVNNAGQ---GRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS  160 (265)
T ss_dssp             HHCSCSEEEECCCC---CCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHH
T ss_pred             HcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhH
Confidence            89999999999999   778899999999999999999999999999999999988889999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       161 as  162 (265)
T 3lf2_A          161 AA  162 (265)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-34  Score=213.85  Aligned_cols=157  Identities=19%  Similarity=0.325  Sum_probs=145.6

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++.+|+++||||++|||++++++|+++|++|++++|+.+.+++..++++...+.++.++.+|++|+++++++++++. +
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999999999999999998888877333689999999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~y~  165 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+. .+.+++..|+
T Consensus        86 ~g~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  162 (262)
T 3pk0_A           86 FGGIDVVCANAGV---FPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG  162 (262)
T ss_dssp             HSCCSEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred             hCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence            9999999999999   77789999999999999999999999999999999999888999999999986 8889999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       163 as  164 (262)
T 3pk0_A          163 AT  164 (262)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.6e-35  Score=216.81  Aligned_cols=149  Identities=17%  Similarity=0.150  Sum_probs=132.0

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.++           ...+..++.+|++++++++++++++. 
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-----------GLPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-----------TSCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-----------CCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999997542           12234568899999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC-Ccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA-GFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~y  164 (167)
                      ++|++|+||||||+.. ...+++.+.+.|+|++.+++|+.++|+++|+++|+|++++.|+||++||..+..+.| ++..|
T Consensus        75 ~~G~iDilVnnAG~~~-~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y  153 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSS-AAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAY  153 (261)
T ss_dssp             HTSSCSEEEECCCCCC-CCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHH
T ss_pred             HcCCCCEEEECCCCCc-cCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHH
Confidence            9999999999999721 234588999999999999999999999999999999999999999999999999987 67888


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       154 ~as  156 (261)
T 4h15_A          154 AAA  156 (261)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.5e-34  Score=214.60  Aligned_cols=156  Identities=24%  Similarity=0.356  Sum_probs=143.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+.+|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++.. .+.++.++.+|++|+++++++++++. +
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-AGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999888876 67789999999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc--CCCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN--GIAGFSE  163 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~  163 (167)
                      +|++|++|||||+   .. ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.+++.+
T Consensus       103 ~g~iD~lVnnAg~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~  179 (283)
T 3v8b_A          103 FGHLDIVVANAGI---NGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATA  179 (283)
T ss_dssp             HSCCCEEEECCCC---CCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHH
T ss_pred             hCCCCEEEECCCC---CCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchH
Confidence            9999999999998   43 3788999999999999999999999999999999998889999999999987  7788999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       180 Y~as  183 (283)
T 3v8b_A          180 YTAT  183 (283)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=8.7e-35  Score=213.52  Aligned_cols=142  Identities=23%  Similarity=0.279  Sum_probs=127.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ++||+++|||+++|||+++|++|+++|++|++++|+.+.+++       ..+.++..+.+|++|++++++++++   +|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~---~g~   78 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFEA---LPR   78 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHHH---CSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHHh---cCC
Confidence            579999999999999999999999999999999998775432       1456799999999999999888765   599


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||+||||||+   .  .++++.+.++|++++++|+.++|+++|.++|+|+++ +|+||||||..+..+.++..+|++|
T Consensus        79 iDiLVNNAGi---~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~as  150 (242)
T 4b79_A           79 LDVLVNNAGI---S--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSAS  150 (242)
T ss_dssp             CSEEEECCCC---C--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             CCEEEECCCC---C--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHH
Confidence            9999999998   3  367789999999999999999999999999999875 4999999999999999999999975

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.3e-34  Score=215.41  Aligned_cols=156  Identities=22%  Similarity=0.235  Sum_probs=147.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++||||++|||+++|++|+++|++|++++|+.+.+++..++++. .+.++.++.+|++|+++++++++++. +
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN-VGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999999999888877 67789999999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus       101 ~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  177 (271)
T 4ibo_A          101 GIDVDILVNNAGI---QFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTV  177 (271)
T ss_dssp             TCCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             CCCCCEEEECCCC---CCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHH
Confidence            9999999999999   6778899999999999999999999999999999999988899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       178 s  178 (271)
T 4ibo_A          178 A  178 (271)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=3.3e-34  Score=215.09  Aligned_cols=157  Identities=20%  Similarity=0.270  Sum_probs=145.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+.++.++.+|++|+++++++++++. +
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999888888888765467789999999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++++++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus       103 ~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (277)
T 4fc7_A          103 FGRIDILINCAAG---NFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS  179 (277)
T ss_dssp             HSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHH
T ss_pred             cCCCCEEEECCcC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            9999999999998   6778899999999999999999999999999999998877899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       180 s  180 (277)
T 4fc7_A          180 A  180 (277)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.2e-34  Score=213.40  Aligned_cols=156  Identities=25%  Similarity=0.327  Sum_probs=145.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+.++.++.+|++|+++++++++++. ++
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999998888888866457789999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.+++..|++
T Consensus        97 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (266)
T 4egf_A           97 GGLDVLVNNAGI---SHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCT  173 (266)
T ss_dssp             TSCSEEEEECCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHH
Confidence            999999999999   6778889999999999999999999999999999998876 689999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       174 s  174 (266)
T 4egf_A          174 S  174 (266)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.6e-34  Score=214.30  Aligned_cols=155  Identities=20%  Similarity=0.215  Sum_probs=145.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ-AGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999988888877 67788999999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus       104 g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  180 (270)
T 3ftp_A          104 GALNVLVNNAGI---TQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAA  180 (270)
T ss_dssp             SCCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHH
Confidence            999999999998   67788899999999999999999999999999999998888999999999999999999999875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-33  Score=212.38  Aligned_cols=155  Identities=19%  Similarity=0.230  Sum_probs=143.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC------------hhhHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD------------LGRLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      .+++|+++||||++|||+++|++|+++|++|++++|+            .+.+++..+.++. .+.++.++.+|++|+++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK-TGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHH
Confidence            4679999999999999999999999999999999997            4556666676766 67789999999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++++++++. +++++|++|||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+.
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  162 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGI---STIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCC---CCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            999999999 89999999999999   67788999999999999999999999999999999999888999999999999


Q ss_pred             cCCCCccccccC
Q 031016          156 NGIAGFSELCKN  167 (167)
Q Consensus       156 ~~~~~~~~y~as  167 (167)
                      .+.+++..|++|
T Consensus       163 ~~~~~~~~Y~as  174 (281)
T 3s55_A          163 SANFAQASYVSS  174 (281)
T ss_dssp             SCCTTCHHHHHH
T ss_pred             CCCCCCchhHHH
Confidence            999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=7.4e-34  Score=211.06  Aligned_cols=155  Identities=22%  Similarity=0.340  Sum_probs=144.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++++.++++. .+.++.++.+|++|+++++++++++. ++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-FPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-STTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999998888876 67789999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.++ +.|+||++||..+..+.+++..|++
T Consensus        82 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  158 (257)
T 3imf_A           82 GRIDILINNAAG---NFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAA  158 (257)
T ss_dssp             SCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHH
Confidence            999999999998   677889999999999999999999999999999999544 4799999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       159 s  159 (257)
T 3imf_A          159 A  159 (257)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.5e-33  Score=209.53  Aligned_cols=160  Identities=16%  Similarity=0.134  Sum_probs=145.8

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      |+..+++++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. .+.++.++.+|++|++++++++++
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~   79 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNT   79 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3444567899999999999999999999999999999999999888888888766 567899999999999999999999


Q ss_pred             HH-hc-CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           84 VL-SL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        84 ~~-~~-~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +. ++ +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++
T Consensus        80 ~~~~~~g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  156 (260)
T 2ae2_A           80 VANHFHGKLNILVNNAGI---VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE  156 (260)
T ss_dssp             HHHHTTTCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC
T ss_pred             HHHHcCCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc
Confidence            98 88 899999999998   66778889999999999999999999999999999998878999999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       157 ~~Y~~s  162 (260)
T 2ae2_A          157 AVYGAT  162 (260)
T ss_dssp             HHHHHH
T ss_pred             chHHHH
Confidence            999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1e-33  Score=212.48  Aligned_cols=156  Identities=26%  Similarity=0.376  Sum_probs=143.0

Q ss_pred             CCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            5 TSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         5 ~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+++.++++.++    .+.++.++.+|++|+++++++++++
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE----IGSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHH
Confidence            345667899999999999999999999999999999999998887776665    3567899999999999999999999


Q ss_pred             H-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           85 L-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                      . +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..
T Consensus        96 ~~~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  172 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGF---GTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTA  172 (277)
T ss_dssp             HHHHSCCCEEEECCCC---CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHcCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChh
Confidence            9 89999999999998   6778899999999999999999999999999999999888899999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       173 Y~as  176 (277)
T 4dqx_A          173 YVAS  176 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-33  Score=212.53  Aligned_cols=155  Identities=22%  Similarity=0.292  Sum_probs=143.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-------------ChhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-------------DLGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|             +.+.++++.+.++. .+.++.++.+|++|++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED-QGRKALTRVLDVRDDA   90 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-TTCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHH
Confidence            468999999999999999999999999999999988             56777888888776 6788999999999999


Q ss_pred             HHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           76 SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        76 ~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      +++++++++. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGV---LSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence            9999999998 89999999999999   6778899999999999999999999999999999998876 79999999999


Q ss_pred             cccCCCCccccccC
Q 031016          154 SLNGIAGFSELCKN  167 (167)
Q Consensus       154 ~~~~~~~~~~y~as  167 (167)
                      +..+.+++..|++|
T Consensus       168 ~~~~~~~~~~Y~as  181 (280)
T 3pgx_A          168 GLKATPGNGHYSAS  181 (280)
T ss_dssp             GTSCCTTBHHHHHH
T ss_pred             hccCCCCchhHHHH
Confidence            99999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=5.5e-34  Score=213.17  Aligned_cols=156  Identities=26%  Similarity=0.349  Sum_probs=144.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +++++|+++||||++|||++++++|+++|++|++++| +.+..+++.+.++. .+.++.++.+|++|+++++++++++. 
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-AGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999988 66677788888876 67789999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|+
T Consensus       103 ~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  179 (269)
T 4dmm_A          103 RWGRLDVLVNNAGI---TRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYS  179 (269)
T ss_dssp             HHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHH
Confidence            89999999999999   677888999999999999999999999999999999988889999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       180 as  181 (269)
T 4dmm_A          180 AA  181 (269)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.6e-33  Score=213.66  Aligned_cols=154  Identities=20%  Similarity=0.250  Sum_probs=145.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.++. .+.++.++.+|++|+++++++++++. +++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-QGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999999999999888877 67789999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||+   ...+++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+++..|++|
T Consensus       108 ~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  184 (301)
T 3tjr_A          108 GVDVVFSNAGI---VVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA  184 (301)
T ss_dssp             SCSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCc---CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence            99999999999   6778899999999999999999999999999999999877 7899999999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-33  Score=210.92  Aligned_cols=161  Identities=24%  Similarity=0.309  Sum_probs=141.7

Q ss_pred             CCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHH
Q 031016            2 RNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus         2 ~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      ++|...+++++|+++||||++|||+++|++|+++|++|++++|+ +..++..+++.. .+.++.++.+|++|+++++++.
T Consensus        21 ~~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~   98 (273)
T 3uf0_A           21 QSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD-GGGSAEAVVADLADLEGAANVA   98 (273)
T ss_dssp             ----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHT-TTCEEEEEECCTTCHHHHHHHH
T ss_pred             hhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHH
Confidence            34555667889999999999999999999999999999999965 456666777766 6778999999999999999985


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           82 EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        82 ~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +.+.+++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++
T Consensus        99 ~~~~~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~  175 (273)
T 3uf0_A           99 EELAATRRVDVLVNNAGI---IARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV  175 (273)
T ss_dssp             HHHHHHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSC
T ss_pred             HHHHhcCCCcEEEECCCC---CCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCC
Confidence            554477999999999999   67788999999999999999999999999999999999888999999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       176 ~~Y~as  181 (273)
T 3uf0_A          176 AAYAAS  181 (273)
T ss_dssp             HHHHHH
T ss_pred             hhHHHH
Confidence            999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-33  Score=212.56  Aligned_cols=156  Identities=20%  Similarity=0.247  Sum_probs=144.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ++++|+++||||++|||+++|++|+++|++|++++| +.+.+++..+.+....+.++.++.+|++|+++++++++++. +
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999 66677788877766346789999999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus       102 ~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  178 (281)
T 3v2h_A          102 FGGADILVNNAGV---QFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVA  178 (281)
T ss_dssp             TSSCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHH
Confidence            9999999999999   7778899999999999999999999999999999999988899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       179 s  179 (281)
T 3v2h_A          179 A  179 (281)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.2e-33  Score=213.79  Aligned_cols=157  Identities=24%  Similarity=0.372  Sum_probs=145.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++......++.++.+|++|+++++++++++. +
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            345799999999999999999999999999999999999999998888876233689999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~y~  165 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+. .+.+++..|+
T Consensus       117 ~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~  193 (293)
T 3rih_A          117 FGALDVVCANAGI---FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYG  193 (293)
T ss_dssp             HSCCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHH
T ss_pred             cCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHH
Confidence            9999999999999   77788999999999999999999999999999999999888999999999996 8889999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       194 as  195 (293)
T 3rih_A          194 AS  195 (293)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1e-33  Score=213.32  Aligned_cols=157  Identities=22%  Similarity=0.235  Sum_probs=143.1

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-------hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHH
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-------RLSRFADEIAREEKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   79 (167)
                      .|++++|+++||||++|||++++++|+++|++|++++|+.+       .+++..+.++. .+.++.++.+|++|++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCTTSHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHH
Confidence            35678999999999999999999999999999999999876       46677777776 67789999999999999999


Q ss_pred             HHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           80 AFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        80 ~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      +++++. +++++|++|||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASA---INLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCC---CCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence            999999 89999999999999   67788999999999999999999999999999999998888999999999998886


Q ss_pred             -CCccccccC
Q 031016          159 -AGFSELCKN  167 (167)
Q Consensus       159 -~~~~~y~as  167 (167)
                       +++..|++|
T Consensus       160 ~~~~~~Y~as  169 (285)
T 3sc4_A          160 WLRPTPYMMA  169 (285)
T ss_dssp             GSCSHHHHHH
T ss_pred             CCCCchHHHH
Confidence             788889874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=9.4e-34  Score=210.71  Aligned_cols=153  Identities=20%  Similarity=0.336  Sum_probs=144.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++||||++|||++++++|+++|++|+++ +|+.+.++++.+.++. .+.++.++.+|++|+++++++++++. +++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-LGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999987 8888888888888876 67789999999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        82 ~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (258)
T 3oid_A           82 RLDVFVNNAAS---GVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVS  157 (258)
T ss_dssp             CCCEEEECCCC---CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHH
Confidence            99999999998   67788999999999999999999999999999999999888999999999999999999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.7e-33  Score=206.93  Aligned_cols=153  Identities=23%  Similarity=0.334  Sum_probs=142.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.. .+.++.++.+|++|+++++++++++. +++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-AGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999999999999888888888876 56789999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ...+++.+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.+++..|++|
T Consensus        84 ~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as  158 (247)
T 2jah_A           84 GLDILVNNAGI---MLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQAT  158 (247)
T ss_dssp             CCSEEEECCCC---CCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHH
Confidence            99999999998   6677889999999999999999999999999999998877 999999999999999999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-33  Score=210.58  Aligned_cols=155  Identities=20%  Similarity=0.288  Sum_probs=142.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-------------ChhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-------------DLGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|             +.+.+++..+.+.. .+.++.++.+|++|++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA-ANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-cCCeEEEEECCCCCHH
Confidence            457999999999999999999999999999999988             56667777777766 6778999999999999


Q ss_pred             HHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           76 SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        76 ~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      +++++++++. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  163 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGV---AAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA  163 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh
Confidence            9999999999 89999999999999   6778889999999999999999999999999999999876 68999999999


Q ss_pred             cccCCCCccccccC
Q 031016          154 SLNGIAGFSELCKN  167 (167)
Q Consensus       154 ~~~~~~~~~~y~as  167 (167)
                      +..+.+++..|++|
T Consensus       164 ~~~~~~~~~~Y~as  177 (277)
T 3tsc_A          164 GMKMQPFMIHYTAS  177 (277)
T ss_dssp             GTSCCSSCHHHHHH
T ss_pred             hCCCCCCchhhHHH
Confidence            99999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-33  Score=208.19  Aligned_cols=154  Identities=21%  Similarity=0.396  Sum_probs=143.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++|||+++|||++++++|+++|++|++++|+.+.++++.+.+.. .+.++.++.+|++|+++++++++++. +++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-TGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999999999999999888877 67889999999999999999999999 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.  .....++.+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.+++..|++|
T Consensus        88 ~id~lv~nAg~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as  163 (264)
T 3ucx_A           88 RVDVVINNAFR--VPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMA  163 (264)
T ss_dssp             CCSEEEECCCS--CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHH
T ss_pred             CCcEEEECCCC--CCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHH
Confidence            99999999997  12557888999999999999999999999999999998865 899999999999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.9e-33  Score=211.16  Aligned_cols=154  Identities=22%  Similarity=0.279  Sum_probs=142.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.. .+.++.++.+|++|+++++++++++. +++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-AGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999999999999888877 67789999999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHH--hhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLS--GMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|  .|.+++.|+||++||..+..+.+++..|++
T Consensus       101 ~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  177 (279)
T 3sju_A          101 PIGILVNSAGR---NGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTA  177 (279)
T ss_dssp             SCCEEEECCCC---CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCcEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHH
Confidence            99999999999   6778899999999999999999999999999999  688877899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       178 s  178 (279)
T 3sju_A          178 S  178 (279)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-33  Score=207.50  Aligned_cols=155  Identities=21%  Similarity=0.298  Sum_probs=146.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-KGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999999999998888877 67789999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        81 ~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (247)
T 3lyl_A           81 LAIDILVNNAGI---TRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAA  157 (247)
T ss_dssp             CCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHH
Confidence            999999999999   67788889999999999999999999999999999999888999999999999999999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-33  Score=208.58  Aligned_cols=157  Identities=22%  Similarity=0.297  Sum_probs=142.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.... +.++.++.+|++|+++++++++++. 
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988888877776521 6689999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCC-CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++++|++|||||.   ... .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|
T Consensus        89 ~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (267)
T 1iy8_A           89 RFGRIDGFFNNAGI---EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY  165 (267)
T ss_dssp             HHSCCSEEEECCCC---CCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred             HcCCCCEEEECCCc---CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence            89999999999998   555 67889999999999999999999999999999998878999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       166 ~as  168 (267)
T 1iy8_A          166 AAA  168 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=5e-33  Score=208.22  Aligned_cols=156  Identities=16%  Similarity=0.136  Sum_probs=144.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+.. .+.++.++.+|++|+++++++++++. +
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999888888888766 56789999999999999999999998 8


Q ss_pred             c-CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           87 L-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~-~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      + +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|+
T Consensus        96 ~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  172 (273)
T 1ae1_A           96 FDGKLNILVNNAGV---VIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS  172 (273)
T ss_dssp             TTSCCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             cCCCCcEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhH
Confidence            8 899999999998   667788899999999999999999999999999999888789999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       173 as  174 (273)
T 1ae1_A          173 AS  174 (273)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.5e-33  Score=208.27  Aligned_cols=152  Identities=22%  Similarity=0.328  Sum_probs=141.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+    +.++.++.+|++|+++++++++++. ++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            357999999999999999999999999999999999988887776654    5689999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      |++|++|||||.   .+..++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.+++..|++
T Consensus        79 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  155 (247)
T 3rwb_A           79 GGIDILVNNASI---VPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVA  155 (247)
T ss_dssp             SCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHH
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHH
Confidence            999999999999   7778899999999999999999999999999999999876 699999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       156 s  156 (247)
T 3rwb_A          156 A  156 (247)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.2e-33  Score=209.86  Aligned_cols=152  Identities=26%  Similarity=0.397  Sum_probs=141.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+    +.++.++.+|++|+++++++++++. ++
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999988887776654    5678899999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus       102 g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  178 (277)
T 3gvc_A          102 GGVDKLVANAGV---VHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMS  178 (277)
T ss_dssp             SSCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHH
Confidence            999999999999   67788999999999999999999999999999999999888999999999999999999999875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.3e-33  Score=211.61  Aligned_cols=156  Identities=22%  Similarity=0.284  Sum_probs=142.0

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-------HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-------LSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+.       +++..+.++. .+.++.++.+|++|+++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA-AGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHH-HTSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHH
Confidence            45689999999999999999999999999999999998653       5666666766 678899999999999999999


Q ss_pred             HHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC--
Q 031016           81 FEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG--  157 (167)
Q Consensus        81 ~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--  157 (167)
                      ++++. +++++|++|||||.   ....++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+..+  
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  157 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASA---IWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW  157 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCC---CCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH
T ss_pred             HHHHHHHcCCCCEEEECCCc---ccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence            99999 89999999999999   6778889999999999999999999999999999999988899999999999888  


Q ss_pred             CCCccccccC
Q 031016          158 IAGFSELCKN  167 (167)
Q Consensus       158 ~~~~~~y~as  167 (167)
                      .+++..|++|
T Consensus       158 ~~~~~~Y~as  167 (274)
T 3e03_A          158 WGAHTGYTLA  167 (274)
T ss_dssp             HHHCHHHHHH
T ss_pred             CCCCchHHHH
Confidence            6788888864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=4.5e-33  Score=209.65  Aligned_cols=155  Identities=20%  Similarity=0.281  Sum_probs=141.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC----------------hhhHHHHHHHHHhhcCCcEEEEEeecC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD----------------LGRLSRFADEIAREEKSQVFAIRIDCS   72 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~D~~   72 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+                .+.++++.+.++. .+.++.++.+|++
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~   86 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-HNRRIVTAEVDVR   86 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-TTCCEEEEECCTT
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-cCCceEEEEcCCC
Confidence            4579999999999999999999999999999999886                5667777777766 6778999999999


Q ss_pred             CHHHHHHHHHHHH-hcCCccEEEEcCCCCCCCCCC-CCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEe
Q 031016           73 DSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPT-NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFT  149 (167)
Q Consensus        73 ~~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~i  149 (167)
                      |+++++++++++. +++++|++|||||+   .... ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGI---GNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT  163 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCC---CCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcc---cCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999999999999 89999999999998   4444 488899999999999999999999999999998876 6899999


Q ss_pred             cCCccccCCCCccccccC
Q 031016          150 GCSASLNGIAGFSELCKN  167 (167)
Q Consensus       150 ss~~~~~~~~~~~~y~as  167 (167)
                      ||..+..+.+++..|++|
T Consensus       164 sS~~~~~~~~~~~~Y~as  181 (286)
T 3uve_A          164 SSVGGLKAYPHTGHYVAA  181 (286)
T ss_dssp             CCGGGTSCCTTCHHHHHH
T ss_pred             CchhhccCCCCccHHHHH
Confidence            999999999999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.1e-33  Score=207.39  Aligned_cols=153  Identities=25%  Similarity=0.364  Sum_probs=142.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++||||++|||++++++|+++|++|+++++ +.+.++++.+.++. .+.++.++.+|++|+++++++++++. +++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA-KGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999876 55777888888877 67789999999999999999999999 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        82 ~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (246)
T 3osu_A           82 SLDVLVNNAGI---TRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVAT  157 (246)
T ss_dssp             CCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHH
Confidence            99999999999   67788899999999999999999999999999999998888999999999999999999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.3e-33  Score=209.92  Aligned_cols=157  Identities=17%  Similarity=0.201  Sum_probs=143.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC---cEEEEEeecCCHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.+++..++++. .+.   ++.++.+|++|+++++++++++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEA-LGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-TCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            346799999999999999999999999999999999999999988888876 444   7999999999999999999999


Q ss_pred             H-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           85 L-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                      . +++++|++|||||.  .....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++.+
T Consensus        86 ~~~~g~id~lv~nAg~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGG--SENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHSCCCEEEECCCC--CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHcCCCCEEEECCCc--CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChh
Confidence            9 89999999999997  13456888999999999999999999999999999999988899999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       164 Y~as  167 (281)
T 3svt_A          164 YGVT  167 (281)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-33  Score=210.43  Aligned_cols=156  Identities=29%  Similarity=0.399  Sum_probs=140.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++....+..+.++.+|++|+++++++++++. ++
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999999999999999999998888888876344456999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccccCCCCcccc
Q 031016           88 GFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++|++|||||.   .. ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++  .|+||++||..+..+.+++..|
T Consensus       110 g~iD~lvnnAG~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y  186 (281)
T 4dry_A          110 ARLDLLVNNAGS---NVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPY  186 (281)
T ss_dssp             SCCSEEEECCCC---CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred             CCCCEEEECCCC---CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhH
Confidence            999999999998   43 46889999999999999999999999999999999875  6899999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       187 ~as  189 (281)
T 4dry_A          187 TAT  189 (281)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=7.7e-33  Score=209.77  Aligned_cols=155  Identities=19%  Similarity=0.296  Sum_probs=141.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC------------hhhHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD------------LGRLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+.++. .+.++.++.+|++|+++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-LGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh-cCCceEEEECCCCCHHH
Confidence            3579999999999999999999999999999999886            5667777777776 67889999999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCCCCC-CCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSWQPT-NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      ++++++++. +++++|++|||||.   .... ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAAL---ASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC---CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCC---CCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            999999999 89999999999998   4444 488999999999999999999999999999988765 68999999999


Q ss_pred             cccCCCCccccccC
Q 031016          154 SLNGIAGFSELCKN  167 (167)
Q Consensus       154 ~~~~~~~~~~y~as  167 (167)
                      +..+.+++..|++|
T Consensus       181 ~~~~~~~~~~Y~as  194 (299)
T 3t7c_A          181 GLRGAENIGNYIAS  194 (299)
T ss_dssp             GTSCCTTCHHHHHH
T ss_pred             hccCCCCcchHHHH
Confidence            99999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-33  Score=210.98  Aligned_cols=155  Identities=24%  Similarity=0.335  Sum_probs=144.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.. .+.++.++.+|++|+++++++++++. ++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-GGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT-TTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999999999999999999999999888876 67789999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCccccc
Q 031016           88 GFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSELC  165 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~y~  165 (167)
                      +++|++|||||.   . ...++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+. .+.+++.+|+
T Consensus        84 g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  160 (280)
T 3tox_A           84 GGLDTAFNNAGA---LGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA  160 (280)
T ss_dssp             SCCCEEEECCCC---CCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHH
T ss_pred             CCCCEEEECCCC---CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHH
Confidence            999999999998   4 4578889999999999999999999999999999999888999999999998 7889999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       161 as  162 (280)
T 3tox_A          161 AS  162 (280)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=7.1e-33  Score=206.23  Aligned_cols=156  Identities=25%  Similarity=0.321  Sum_probs=145.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.. .+.++.++.+|++++++++++++++. ++
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-AGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-hCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999999998888877 67889999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.  ....+++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus       105 g~id~lv~~Ag~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          105 GRCDVLVNNAGV--GWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             SCCSEEEECCCC--CCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             CCCCEEEECCCc--cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence            999999999997  234568889999999999999999999999999999999888999999999999999999999874

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.3e-33  Score=206.88  Aligned_cols=155  Identities=23%  Similarity=0.359  Sum_probs=135.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-C-CcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-K-SQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.... + .++.++.+|++|+++++++++++. 
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999998888887632 3 678999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||.   ....++ +.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|+
T Consensus        84 ~~g~iD~lvnnAg~---~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (250)
T 3nyw_A           84 KYGAVDILVNAAAM---FMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG  159 (250)
T ss_dssp             HHCCEEEEEECCCC---CCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHH
T ss_pred             hcCCCCEEEECCCc---CCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchH
Confidence            89999999999998   666677 77899999999999999999999999999988889999999999999877788998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       160 as  161 (250)
T 3nyw_A          160 ST  161 (250)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-33  Score=206.89  Aligned_cols=158  Identities=22%  Similarity=0.301  Sum_probs=143.2

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+....+.++.++.+|++++++++++++++. 
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999998888888777732256788999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc-cccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA-SLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~-~~~~~~~~~~y  164 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.. +..+.+++..|
T Consensus        96 ~~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  172 (267)
T 1vl8_A           96 KFGKLDTVVNAAGI---NRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAY  172 (267)
T ss_dssp             HHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHH
T ss_pred             HcCCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhH
Confidence            88999999999998   666788899999999999999999999999999999888789999999999 88888999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       173 ~as  175 (267)
T 1vl8_A          173 AAS  175 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.6e-33  Score=213.09  Aligned_cols=156  Identities=19%  Similarity=0.275  Sum_probs=143.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-------HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-------LSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.       +++..++++. .+.++.++.+|++|+++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-VGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHH
Confidence            45689999999999999999999999999999999998764       5666777766 678899999999999999999


Q ss_pred             HHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC--
Q 031016           81 FEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG--  157 (167)
Q Consensus        81 ~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--  157 (167)
                      ++++. +++++|++|||||.   ....++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+..+  
T Consensus       120 ~~~~~~~~g~iDilVnnAG~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~  196 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASA---ISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW  196 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred             HHHHHHHcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence            99999 89999999999999   6778899999999999999999999999999999999988899999999999887  


Q ss_pred             CCCccccccC
Q 031016          158 IAGFSELCKN  167 (167)
Q Consensus       158 ~~~~~~y~as  167 (167)
                      .+++..|++|
T Consensus       197 ~~~~~~Y~aS  206 (346)
T 3kvo_A          197 FKQHCAYTIA  206 (346)
T ss_dssp             TSSSHHHHHH
T ss_pred             CCCchHHHHH
Confidence            7888999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=4.7e-33  Score=205.38  Aligned_cols=154  Identities=22%  Similarity=0.345  Sum_probs=141.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||++++++|+++|++|++++| +++.++++.++++. .+.++.++.+|++|+++++++++++. ++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK-LGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999 77778888877766 56789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        81 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (246)
T 2uvd_A           81 GQVDILVNNAGV---TKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAA  157 (246)
T ss_dssp             SCCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHH
Confidence            999999999998   66778889999999999999999999999999999998878999999999999999999999874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=7.5e-33  Score=205.71  Aligned_cols=158  Identities=15%  Similarity=0.155  Sum_probs=140.3

Q ss_pred             CCCCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++++|+++||||++  |||+++|++|+++|++|++++|+++.++++.+.++...+.++.++.+|++++++++++++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            456899999999876  999999999999999999999999999999888887455689999999999999999999999


Q ss_pred             -hcCCccEEEEcCCCCCC-CCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           86 -SLGFVEVLVYNAYQPVS-WQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                       ++|++|++|||||+... ....++.+.+.|+|+..+++|+.+++.+++.+.+.+++  +|+||++||..+..+.+++.+
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~~  159 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNV  159 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTHH
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccchh
Confidence             99999999999997211 12345678899999999999999999999999988765  589999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       160 Y~as  163 (256)
T 4fs3_A          160 MGVA  163 (256)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            9875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.3e-32  Score=204.77  Aligned_cols=157  Identities=24%  Similarity=0.303  Sum_probs=143.6

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|++++++++.+.+....+.++.++.+|++|+++++++++++. +
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999888888777765226789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus        83 ~g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  159 (263)
T 3ai3_A           83 FGGADILVNNAGT---GSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNV  159 (263)
T ss_dssp             HSSCSEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHH
Confidence            8999999999998   6677888999999999999999999999999999998887899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       160 s  160 (263)
T 3ai3_A          160 T  160 (263)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1e-32  Score=210.73  Aligned_cols=155  Identities=21%  Similarity=0.360  Sum_probs=142.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC------------hhhHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD------------LGRLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+.+.. .+.++.++.+|++|+++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE-QGRRIIARQADVRDLAS  121 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHH
Confidence            3578999999999999999999999999999999875            5566777777766 67889999999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCcc
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSAS  154 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~  154 (167)
                      ++++++++. +++++|++|||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~  198 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGI---SNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG  198 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHh
Confidence            999999999 89999999999999   6778899999999999999999999999999999998875 689999999999


Q ss_pred             ccCCCCccccccC
Q 031016          155 LNGIAGFSELCKN  167 (167)
Q Consensus       155 ~~~~~~~~~y~as  167 (167)
                      ..+.+++..|++|
T Consensus       199 ~~~~~~~~~Y~as  211 (317)
T 3oec_A          199 LRGAPGQSHYAAS  211 (317)
T ss_dssp             SSCCTTBHHHHHH
T ss_pred             cCCCCCCcchHHH
Confidence            9999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.6e-32  Score=204.57  Aligned_cols=157  Identities=17%  Similarity=0.189  Sum_probs=145.0

Q ss_pred             CCCCCcEEEEEcCC-CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVG-PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~-~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +.+++|+++||||+ .|||++++++|+++|++|++++|+.+.+++..++++...+.++.++.+|++|+++++++++++. 
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            34689999999998 4999999999999999999999999999998888876455689999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.++ +.|+||++||..+..+.+++..|
T Consensus        98 ~~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  174 (266)
T 3o38_A           98 KAGRLDVLVNNAGL---GGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY  174 (266)
T ss_dssp             HHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HhCCCcEEEECCCc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence            89999999999998   677888999999999999999999999999999999987 57899999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       175 ~~s  177 (266)
T 3o38_A          175 AAA  177 (266)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9e-33  Score=207.28  Aligned_cols=159  Identities=21%  Similarity=0.227  Sum_probs=143.5

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      |...|++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.. .+ ++.++.+|++|++++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~~~~~~Dv~d~~~v~~~~~~   98 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-YG-DCQAIPADLSSEAGARRLAQA   98 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-SS-CEEECCCCTTSHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-ceEEEEeeCCCHHHHHHHHHH
Confidence            4444567899999999999999999999999999999999999888888877765 44 788999999999999999999


Q ss_pred             HH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC----ceEEEecCCccccCC
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK----GTIIFTGCSASLNGI  158 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~iv~iss~~~~~~~  158 (167)
                      +. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.    |+||++||..+..+.
T Consensus        99 ~~~~~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~  175 (276)
T 2b4q_A           99 LGELSARLDILVNNAGT---SWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM  175 (276)
T ss_dssp             HHHHCSCCSEEEECCCC---CCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC
T ss_pred             HHHhcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC
Confidence            98 88999999999998   66678889999999999999999999999999999988765    899999999999998


Q ss_pred             CCcc-ccccC
Q 031016          159 AGFS-ELCKN  167 (167)
Q Consensus       159 ~~~~-~y~as  167 (167)
                      ++.. .|++|
T Consensus       176 ~~~~~~Y~as  185 (276)
T 2b4q_A          176 GEQAYAYGPS  185 (276)
T ss_dssp             CCSCTTHHHH
T ss_pred             CCCccccHHH
Confidence            8888 89864

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=5.6e-33  Score=203.94  Aligned_cols=149  Identities=23%  Similarity=0.284  Sum_probs=132.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+.    .++.++.+|++|+++++++++++. ++++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999988888777763    268999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.+++..|++|
T Consensus        78 id~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~as  151 (235)
T 3l6e_A           78 PELVLHCAGT---GEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCAS  151 (235)
T ss_dssp             CSEEEEECCC---C------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHH
T ss_pred             CcEEEECCCC---CCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHH
Confidence            9999999999   6778889999999999999999999999999999998765 699999999999999999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=4.2e-33  Score=208.10  Aligned_cols=152  Identities=21%  Similarity=0.296  Sum_probs=130.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|++|+++|++|++.+|+.+.++++.+.    .+.++.++.+|++|+++++++++++. ++
T Consensus        24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD----LGKDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999999998887776554    45689999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus       100 g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  176 (266)
T 3grp_A          100 EGIDILVNNAGI---TRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAA  176 (266)
T ss_dssp             TSCCEEEECCCC---C-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHH
Confidence            999999999999   67788899999999999999999999999999999999888999999999999999999999874

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.1e-32  Score=204.93  Aligned_cols=151  Identities=28%  Similarity=0.408  Sum_probs=140.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+    +.++.++.+|++|+++++++++++. +++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999999988887777665    4578999999999999999999999 999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.+.|.|.+++ .|+||++||..+..+.+++..|++|
T Consensus        82 ~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (259)
T 4e6p_A           82 GLDILVNNAAL---FDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCAT  158 (259)
T ss_dssp             SCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHH
Confidence            99999999999   6778899999999999999999999999999999998876 6899999999999999999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.4e-33  Score=207.74  Aligned_cols=151  Identities=27%  Similarity=0.438  Sum_probs=137.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+    +.++.++.+|++|+++++++++++. +++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----GDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999988887777665    3578999999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccccCCCCccccc
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++|++|||||.   .. ..++.+.+.++|++.+++|+.+++++++.++|.|.+++  .|+||++||..+..+.+++..|+
T Consensus       102 ~iD~lVnnAg~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  178 (272)
T 4dyv_A          102 RVDVLFNNAGT---GAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT  178 (272)
T ss_dssp             CCCEEEECCCC---CCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHH
T ss_pred             CCCEEEECCCC---CCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHH
Confidence            99999999998   43 36888999999999999999999999999999999876  68999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       179 as  180 (272)
T 4dyv_A          179 AT  180 (272)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=5.7e-33  Score=207.68  Aligned_cols=157  Identities=19%  Similarity=0.217  Sum_probs=144.0

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .|++++|+++||||++|||++++++|+++|++|++++|+ .+..+++.+.++. .+.++.++.+|++++++++++++++.
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-KGYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHH
Confidence            466789999999999999999999999999999999994 5556667777766 67789999999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                       +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|
T Consensus       103 ~~~g~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (271)
T 4iin_A          103 QSDGGLSYLVNNAGV---VRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNY  179 (271)
T ss_dssp             HHHSSCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HhcCCCCEEEECCCc---CCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHh
Confidence             88999999999999   77788889999999999999999999999999999999888999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       180 ~as  182 (271)
T 4iin_A          180 SAS  182 (271)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.2e-32  Score=206.68  Aligned_cols=156  Identities=28%  Similarity=0.375  Sum_probs=142.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++++.++++. .+.++.++.+|++|+++++++++++. +
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG-VGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999999999999999999888877 67789999999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCC--CCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGI--AGFSE  163 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~--~~~~~  163 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.  +++..
T Consensus       107 ~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~  183 (276)
T 3r1i_A          107 LGGIDIAVCNAGI---VSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH  183 (276)
T ss_dssp             HSCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred             cCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence            9999999999999   6778889999999999999999999999999999999876 4899999999987765  36778


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       184 Y~as  187 (276)
T 3r1i_A          184 YCTS  187 (276)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.9e-33  Score=208.22  Aligned_cols=155  Identities=17%  Similarity=0.188  Sum_probs=144.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+.. .+.++.++.+|++|+++++++++++.+.+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA-SGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH-TTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999999999988888888877 67889999999999999999999998339


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|++|
T Consensus       109 ~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  184 (275)
T 4imr_A          109 PVDILVINASA---QINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAAT  184 (275)
T ss_dssp             CCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHH
Confidence            99999999998   67788999999999999999999999999999999999888999999999999988888889875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.9e-32  Score=209.34  Aligned_cols=155  Identities=19%  Similarity=0.241  Sum_probs=143.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC--cEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS--QVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.. .+.  ++.++.+|++++++++++++++. 
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA-EGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999988888876 444  79999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc------CCceEEEecCCccccCCC
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER------GKGTIIFTGCSASLNGIA  159 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~~  159 (167)
                      +++++|++|||||+   ....++.+.+.++|++++++|+.+++.+++.++|.|.++      +.|+||++||.++..+.+
T Consensus        84 ~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           84 RFGPVSILCNNAGV---NLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             HTCCEEEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             hCCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence            88999999999998   677899999999999999999999999999999999875      478999999999999999


Q ss_pred             CccccccC
Q 031016          160 GFSELCKN  167 (167)
Q Consensus       160 ~~~~y~as  167 (167)
                      ++..|++|
T Consensus       161 ~~~~Y~aS  168 (319)
T 3ioy_A          161 SPGIYNTT  168 (319)
T ss_dssp             SSHHHHHH
T ss_pred             CCHHHHHH
Confidence            99999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-32  Score=205.40  Aligned_cols=154  Identities=20%  Similarity=0.305  Sum_probs=142.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+.. .+.++.++.+|++|+++++++++++. +++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5689999999999999999999999999999999999888888888866 56789999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   . ...++.+.+.++|++.+++|+.+++++++.+.|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        84 ~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  160 (262)
T 1zem_A           84 KIDFLFNNAGY---QGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  160 (262)
T ss_dssp             CCCEEEECCCC---CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHH
Confidence            99999999998   5 5678889999999999999999999999999999998878999999999999999999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.7e-32  Score=203.87  Aligned_cols=158  Identities=16%  Similarity=0.228  Sum_probs=142.9

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ...++++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+.. .+.++.++.+|++|+++++++++++.
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   86 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG-EGLSVTGTVCHVGKAEDRERLVAMAV   86 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence            33456799999999999999999999999999999999999888888887766 56789999999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                       +++++|++|||||.   .. ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..
T Consensus        87 ~~~g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  163 (260)
T 2zat_A           87 NLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP  163 (260)
T ss_dssp             HHHSCCCEEEECCCC---CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHcCCCCEEEECCCC---CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchh
Confidence             88999999999997   43 46788899999999999999999999999999999887899999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       164 Y~~s  167 (260)
T 2zat_A          164 YNVS  167 (260)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9864

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.7e-33  Score=209.95  Aligned_cols=155  Identities=18%  Similarity=0.275  Sum_probs=143.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC---eEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY---TVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.+|+++||||++|||+++|++|+++|+   +|++.+|+.+.++++.+.+.... +.++.++.+|++|+++++++++++.
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999998   99999999999999888887632 5689999999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                       +++++|++|||||.   .. ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..
T Consensus       111 ~~~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~  187 (287)
T 3rku_A          111 QEFKDIDILVNNAGK---ALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSI  187 (287)
T ss_dssp             GGGCSCCEEEECCCC---CCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred             HhcCCCCEEEECCCc---CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCch
Confidence             89999999999998   43 67888999999999999999999999999999999988899999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       188 Y~as  191 (287)
T 3rku_A          188 YCAS  191 (287)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-32  Score=207.33  Aligned_cols=156  Identities=22%  Similarity=0.340  Sum_probs=132.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +.+|+++||||++|||++++++|+++|++|++++| +.+.+++..+++.. .+.++.++.+|++|+++++++++++. ++
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-LGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999985 77778888888876 67889999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCCcccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++|++|||||... ....++.+.+.++|++.+++|+.+++++++.++|.|.+++   .|+||++||..+..+.+++..|
T Consensus       106 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  184 (280)
T 4da9_A          106 GRIDCLVNNAGIAS-IVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDY  184 (280)
T ss_dssp             SCCCEEEEECC-------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHH
T ss_pred             CCCCEEEECCCccc-cCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHH
Confidence            99999999999721 2456788999999999999999999999999999998865   6899999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       185 ~as  187 (280)
T 4da9_A          185 CMS  187 (280)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=5.2e-33  Score=207.11  Aligned_cols=157  Identities=20%  Similarity=0.195  Sum_probs=138.2

Q ss_pred             CCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC---hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHH
Q 031016            5 TSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD---LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus         5 ~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      ...+++++|+++||||++|||+++|++|+++|++|++++|.   .+.++++.+++.. .+.++.++.+|++|++++++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED-QGAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT-TTCEEEEEECCCCSHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHH
Confidence            34456789999999999999999999999999999998764   4556777777766 6778999999999999999999


Q ss_pred             HHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           82 EGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        82 ~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      +++. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.++
T Consensus        83 ~~~~~~~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~  157 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGK---VLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGF  157 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCC---CCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCC
T ss_pred             HHHHHHcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCC
Confidence            9999 89999999999999   67788999999999999999999999999999999943  589999999999999999


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       158 ~~~Y~as  164 (262)
T 3ksu_A          158 YSTYAGN  164 (262)
T ss_dssp             CCC----
T ss_pred             CchhHHH
Confidence            9999986

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-32  Score=205.24  Aligned_cols=154  Identities=16%  Similarity=0.221  Sum_probs=139.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+    +.++.++.+|++|+++++++++++. ++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999999999999998888777665    5578899999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||... ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        84 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (271)
T 3tzq_B           84 GRLDIVDNNAAHSD-PADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACT  162 (271)
T ss_dssp             SCCCEEEECCCCCC-TTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHH
Confidence            99999999999811 12456788999999999999999999999999999999888999999999999999999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.1e-32  Score=204.85  Aligned_cols=155  Identities=19%  Similarity=0.244  Sum_probs=141.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++. ++++.+.+....+.++.++.+|++|+++++++++++. ++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999999877 7777777765236789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        82 g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  158 (260)
T 1x1t_A           82 GRIDILVNNAGI---QHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAA  158 (260)
T ss_dssp             SCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHH
Confidence            999999999998   66678889999999999999999999999999999998878999999999999999999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.9e-32  Score=203.50  Aligned_cols=152  Identities=21%  Similarity=0.309  Sum_probs=140.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh--HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR--LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +|+++||||++|||++++++|+++|++|++++|+.+.  ++++.+.++. .+.++.++.+|++|+++++++++++. +++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA-ADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999998877  7777777765 56789999999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++. |+||++||..+..+.+++..|++|
T Consensus        81 ~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (258)
T 3a28_C           81 GFDVLVNNAGI---AQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTT  157 (258)
T ss_dssp             CCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHH
Confidence            99999999998   66678889999999999999999999999999999998776 899999999999999999999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-32  Score=201.02  Aligned_cols=158  Identities=20%  Similarity=0.290  Sum_probs=143.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeec--CCHHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC--SDSRSVREAFEGVL   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~~~~~~~~~~~~   85 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+......+..++.+|+  +++++++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999999998888763335677777777  99999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                       +++++|++|||||.  ..+..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|
T Consensus        90 ~~~g~id~lv~nAg~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  167 (247)
T 3i1j_A           90 HEFGRLDGLLHNASI--IGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAY  167 (247)
T ss_dssp             HHHSCCSEEEECCCC--CCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HhCCCCCEEEECCcc--CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchh
Confidence             88999999999997  124568889999999999999999999999999999998888999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       168 ~~s  170 (247)
T 3i1j_A          168 GVS  170 (247)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-32  Score=202.51  Aligned_cols=152  Identities=25%  Similarity=0.347  Sum_probs=141.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. .+.++.++.+|++|+++++++++++. +++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999999888888888766 56689999999999999999999998 89999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+++..|++|
T Consensus        81 d~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  155 (256)
T 1geg_A           81 DVIVNNAGV---APSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSS  155 (256)
T ss_dssp             CEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHH
Confidence            999999998   6677888999999999999999999999999999999877 7899999999999999999999874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.6e-32  Score=204.82  Aligned_cols=155  Identities=23%  Similarity=0.306  Sum_probs=143.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999888888888766 56789999999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHh--hHhcCCceEEEecCCccccCCCCccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSG--MVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.  |.+++.|+||++||..+..+.+++..|+
T Consensus        98 g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  174 (277)
T 2rhc_B           98 GPVDVLVNNAGR---PGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYS  174 (277)
T ss_dssp             CSCSEEEECCCC---CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHH
Confidence            999999999998   66678889999999999999999999999999999  9887779999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       175 as  176 (277)
T 2rhc_B          175 AS  176 (277)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.1e-32  Score=200.86  Aligned_cols=157  Identities=21%  Similarity=0.286  Sum_probs=132.8

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.. .+.++.++.+|++|+++++++++++. 
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-DGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999999999888877 67789999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||........++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+.   ++...|+
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            8899999999999732234456788999999999999999999999999999999888999999998876   4556677


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       160 as  161 (253)
T 3qiv_A          160 LA  161 (253)
T ss_dssp             CC
T ss_pred             HH
Confidence            65

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-32  Score=206.31  Aligned_cols=156  Identities=24%  Similarity=0.343  Sum_probs=140.0

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      ..+++++|+++||||++|||++++++|+++|++|++++++ .+..+++.++++. .+.++.++.+|++|+++++++++++
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-AGGRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999999998654 5667778888876 6788999999999999999999999


Q ss_pred             H-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC-CCCcc
Q 031016           85 L-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG-IAGFS  162 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-~~~~~  162 (167)
                      . ++|++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|++  .|+||++||..+..+ .+++.
T Consensus       104 ~~~~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~  178 (271)
T 3v2g_A          104 VEALGGLDILVNSAGI---WHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGIS  178 (271)
T ss_dssp             HHHHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCH
T ss_pred             HHHcCCCcEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCch
Confidence            9 89999999999999   77788999999999999999999999999999999965  479999999887665 78899


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       179 ~Y~as  183 (271)
T 3v2g_A          179 LYSAS  183 (271)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=3.3e-32  Score=201.27  Aligned_cols=151  Identities=26%  Similarity=0.369  Sum_probs=137.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||++++++|+++|++|++++|++ +.+++   .++. .+.++.++.+|++|+++++++++++. ++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999987 65554   3333 56689999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        81 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (249)
T 2ew8_A           81 GRCDILVNNAGI---YPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST  157 (249)
T ss_dssp             SCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHH
Confidence            999999999998   66678889999999999999999999999999999998878999999999999999999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-32  Score=203.20  Aligned_cols=156  Identities=24%  Similarity=0.326  Sum_probs=141.6

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ....+|+++||||++|||+++|++|+++|++|++++ |+.+...+..+.++. .+.++.++.+|++|+++++++++++. 
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-LGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999987 667777777777776 67789999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|+
T Consensus        88 ~~g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (256)
T 3ezl_A           88 EVGEIDVLVNNAGI---TRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYS  164 (256)
T ss_dssp             HTCCEEEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHH
T ss_pred             hcCCCCEEEECCCC---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccH
Confidence            89999999999999   677788999999999999999999999999999999998889999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       165 as  166 (256)
T 3ezl_A          165 TA  166 (256)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.9e-32  Score=203.51  Aligned_cols=154  Identities=18%  Similarity=0.283  Sum_probs=140.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.... +..+..+.+|+++++++++++++   
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   82 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK---   82 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---
Confidence            45679999999999999999999999999999999999999888888887633 45788999999999998887664   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus        83 ~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  159 (267)
T 3t4x_A           83 YPKVDILINNLGI---FEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSA  159 (267)
T ss_dssp             CCCCSEEEECCCC---CCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCC---CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHH
Confidence            5899999999999   6778889999999999999999999999999999999988899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       160 s  160 (267)
T 3t4x_A          160 T  160 (267)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.1e-32  Score=204.35  Aligned_cols=148  Identities=24%  Similarity=0.366  Sum_probs=135.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++.       ...++.++.+|++|+++++++++++. +++
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------NLPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------CCTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------hcCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            5689999999999999999999999999999999987654432       23478899999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.++..+.+++..|++|
T Consensus        87 ~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  162 (266)
T 3p19_A           87 PADAIVNNAGM---MLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGT  162 (266)
T ss_dssp             SEEEEEECCCC---CCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHH
Confidence            99999999999   67788999999999999999999999999999999999888999999999999999999999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=5e-32  Score=201.39  Aligned_cols=155  Identities=21%  Similarity=0.283  Sum_probs=141.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.... +.++.++.+|++|+++++++++++. +
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999988888877776421 3378999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++ +|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus        84 ~g-id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  159 (260)
T 2z1n_A           84 GG-ADILVYSTGG---PRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNI  159 (260)
T ss_dssp             TC-CSEEEECCCC---CCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             cC-CCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHH
Confidence            88 9999999998   6677888999999999999999999999999999999887899999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       160 s  160 (260)
T 2z1n_A          160 M  160 (260)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.4e-32  Score=200.07  Aligned_cols=153  Identities=29%  Similarity=0.379  Sum_probs=140.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....+.++.++.+|++|+++++++++++. ++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            368999999999999999999999999999999999999988888874467889999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++ +.|++|++||..+..+.++...|++|
T Consensus        81 id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~s  154 (235)
T 3l77_A           81 VDVVVANAGL---GYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVST  154 (235)
T ss_dssp             CSEEEECCCC---CCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHH
T ss_pred             CCEEEECCcc---ccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHH
Confidence            9999999999   77788999999999999999999999999999999954 45899999999999999999999864

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.3e-32  Score=202.59  Aligned_cols=160  Identities=22%  Similarity=0.263  Sum_probs=139.6

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016            1 MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus         1 ~~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      |..|...+++++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+    ..++.++.+|++|+++++++
T Consensus         1 ~~~m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~d~~~v~~~   76 (263)
T 3ak4_A            1 GSHMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL----ENGGFAVEVDVTKRASVDAA   76 (263)
T ss_dssp             -----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----TTCCEEEECCTTCHHHHHHH
T ss_pred             CCCcccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hcCCeEEEEeCCCHHHHHHH
Confidence            44565556678999999999999999999999999999999999987776655443    23678899999999999999


Q ss_pred             HHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCC
Q 031016           81 FEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGI  158 (167)
Q Consensus        81 ~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~  158 (167)
                      ++++. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|+||++||..+..+.
T Consensus        77 ~~~~~~~~g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (263)
T 3ak4_A           77 MQKAIDALGGFDLLCANAGV---STMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA  153 (263)
T ss_dssp             HHHHHHHHTCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHcCCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC
Confidence            99998 88999999999998   6667888999999999999999999999999999998876 6999999999999999


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      +++..|++|
T Consensus       154 ~~~~~Y~~s  162 (263)
T 3ak4_A          154 PLLAHYSAS  162 (263)
T ss_dssp             TTCHHHHHH
T ss_pred             CCchhHHHH
Confidence            999999864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-32  Score=205.23  Aligned_cols=154  Identities=24%  Similarity=0.284  Sum_probs=138.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      |.+++|+++||||++|||+++|++|+++|++|++. .|+.+..+++.+.++. .+.++.++.+|++|+++++++++++. 
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-AGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            44578999999999999999999999999999988 4566677788888776 67789999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.+++..|+
T Consensus       102 ~~g~iD~lvnnAG~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  176 (267)
T 3u5t_A          102 AFGGVDVLVNNAGI---MPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYA  176 (267)
T ss_dssp             HHSCEEEEEECCCC---CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HcCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHH
Confidence            89999999999999   77788999999999999999999999999999999965  37999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       177 as  178 (267)
T 3u5t_A          177 AA  178 (267)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-32  Score=208.32  Aligned_cols=155  Identities=20%  Similarity=0.244  Sum_probs=137.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-----hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-----LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+     .+.++++.+.+.. .+.++.++.+|++|++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~-~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD-NDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHH-HTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHH
Confidence            3568999999999999999999999999999988775     4455666666655 677899999999999999999999


Q ss_pred             HH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC-CCCc
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG-IAGF  161 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-~~~~  161 (167)
                      +. ++|++|++|||||.   ...+++++.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+ .+++
T Consensus        81 ~~~~~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~  157 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGH---MVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYL  157 (324)
T ss_dssp             HHHHHSCCSEEEECCCC---CBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSC
T ss_pred             HHHHcCCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcc
Confidence            99 89999999999998   6778899999999999999999999999999999999988899999999998854 4678


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       158 ~~Y~as  163 (324)
T 3u9l_A          158 APYFAA  163 (324)
T ss_dssp             HHHHHH
T ss_pred             hhHHHH
Confidence            889875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-32  Score=204.91  Aligned_cols=154  Identities=20%  Similarity=0.272  Sum_probs=140.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC---cEEEEEeecCCHHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. .+.   ++.++.+|++|+++++++++++.
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK-AGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888888888765 454   79999999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCC--CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC-CCc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTN--FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI-AGF  161 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~  161 (167)
                       +++++|++|||||.   ....+  +.+.+.++|++.+++|+.+++.+++.++|.|.+++ |+||++||..+..+. +++
T Consensus       102 ~~~g~iD~lvnnAG~---~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~  177 (297)
T 1xhl_A          102 AKFGKIDILVNNAGA---NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGY  177 (297)
T ss_dssp             HHHSCCCEEEECCCC---CCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTS
T ss_pred             HhcCCCCEEEECCCc---CcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCc
Confidence             88999999999998   55566  88899999999999999999999999999998876 999999999999888 888


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       178 ~~Y~as  183 (297)
T 1xhl_A          178 PYYACA  183 (297)
T ss_dssp             HHHHHH
T ss_pred             chHHHH
Confidence            999864

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.7e-32  Score=202.49  Aligned_cols=150  Identities=24%  Similarity=0.358  Sum_probs=138.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+    +.++.++.+|++|+++++++++++. ++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            357999999999999999999999999999999999988887776665    4578999999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.+++..|++|
T Consensus        81 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  155 (255)
T 4eso_A           81 GAIDLLHINAGV---SELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSAS  155 (255)
T ss_dssp             SSEEEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHH
Confidence            999999999999   67788999999999999999999999999999999966  4799999999999999999999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.8e-32  Score=203.86  Aligned_cols=154  Identities=21%  Similarity=0.281  Sum_probs=139.6

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +.+++|+++||||++|||++++++|+++|++|+++ .++.+..++..+.++. .+.++.++.+|++|+++++++++++. 
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK-LGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT-TTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999998 5666777777888876 67789999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCccc
Q 031016           86 SLGFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSE  163 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~  163 (167)
                      ++|++|++|||||.   . ...++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+. .+.+++..
T Consensus        83 ~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~  157 (259)
T 3edm_A           83 KFGEIHGLVHVAGG---LIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALA  157 (259)
T ss_dssp             HHCSEEEEEECCCC---CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHH
T ss_pred             HhCCCCEEEECCCc---cCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHH
Confidence            89999999999998   4 6678899999999999999999999999999999976  4799999999998 78899999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       158 Y~as  161 (259)
T 3edm_A          158 YATS  161 (259)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=5.2e-32  Score=202.43  Aligned_cols=154  Identities=18%  Similarity=0.304  Sum_probs=139.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ..+++|+++||||++|||++++++|+++|++|+++++ +.+.++++.++++. .+.++.++.+|++|+++++++++++. 
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-LGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999865 55667788888877 77889999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc-cccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA-SLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~-~~~~~~~~~~y  164 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||.. +..+.+++..|
T Consensus        93 ~~g~id~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y  167 (270)
T 3is3_A           93 HFGHLDIAVSNSGV---VSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLY  167 (270)
T ss_dssp             HHSCCCEEECCCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHH
T ss_pred             HcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchh
Confidence            89999999999999   67788999999999999999999999999999999976  47999999988 56788999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       168 ~as  170 (270)
T 3is3_A          168 SGS  170 (270)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.5e-32  Score=203.99  Aligned_cols=154  Identities=23%  Similarity=0.315  Sum_probs=140.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +.+|+++||||++|||++++++|+++|++|++++ ++.+..++..+.+.. .+.++.++.+|++|+++++++++++. ++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-AGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-TTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999998 566666666666665 67789999999999999999999999 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus       102 g~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  178 (269)
T 3gk3_A          102 GKVDVLINNAGI---TRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASA  178 (269)
T ss_dssp             SCCSEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred             CCCCEEEECCCc---CCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHH
Confidence            999999999999   67788889999999999999999999999999999998888999999999999999999999874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=4.2e-32  Score=201.30  Aligned_cols=151  Identities=22%  Similarity=0.206  Sum_probs=137.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.+++    +.++.++.+|++++++++++++++. +++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999987776665543    4478899999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        79 ~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  154 (254)
T 1hdc_A           79 SVDGLVNNAGI---STGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGAS  154 (254)
T ss_dssp             CCCEEEECCCC---CCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHH
Confidence            99999999998   66678889999999999999999999999999999998878999999999999999999999874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=9.4e-32  Score=200.06  Aligned_cols=151  Identities=21%  Similarity=0.271  Sum_probs=138.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++..+++.+.+..    ++.++.+|++|+++++++++++. +++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999999999998877776665532    58889999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        81 ~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (260)
T 1nff_A           81 GLHVLVNNAGI---LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTAT  156 (260)
T ss_dssp             CCCEEEECCCC---CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHH
Confidence            99999999998   66778889999999999999999999999999999998878999999999999999999999864

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=5.8e-32  Score=204.21  Aligned_cols=156  Identities=17%  Similarity=0.246  Sum_probs=140.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHH------------
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSR------------   75 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~------------   75 (167)
                      ++++|+++|||+++|||++++++|+++|++|++++ |+.+.++++.+.+....+.++.++.+|+++++            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            35789999999999999999999999999999999 99988888888886225678999999999999            


Q ss_pred             -----HHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCC--------------HHHHHHHhhhhhHHHHHHHHHHH
Q 031016           76 -----SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEIS--------------FDSFQKSIAISSLGAFLCAQQVL  135 (167)
Q Consensus        76 -----~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~  135 (167)
                           +++++++++. +++++|+||||||+   ....++.+.+              .++|+.++++|+.+++++++.++
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASS---FYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCC---CCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCC---CCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                 9999999998 89999999999998   6667888888              99999999999999999999999


Q ss_pred             HhhHhcC------CceEEEecCCccccCCCCccccccC
Q 031016          136 SGMVERG------KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus       136 ~~~~~~~------~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |.|.+++      .|+||++||..+..+.+++..|++|
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  200 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA  200 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHH
Confidence            9998876      6999999999999999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=6e-32  Score=202.68  Aligned_cols=152  Identities=22%  Similarity=0.322  Sum_probs=135.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC------------hhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD------------LGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      .++.+|+++||||++|||++++++|+++|++|++++|+            .+.+++..+.+.. .+.++.++.+|++|++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED-IGSRIVARQADVRDRE   87 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-HTCCEEEEECCTTCHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh-cCCeEEEEeCCCCCHH
Confidence            45689999999999999999999999999999999987            5667777777766 6778999999999999


Q ss_pred             HHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           76 SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        76 ~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      +++++++++. +++++|++|||||+   ....+    +.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~---~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  160 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGI---APMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA  160 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCC---CCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC---CCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence            9999999999 89999999999998   43332    5899999999999999999999999998875 68999999999


Q ss_pred             cccCC----CCccccccC
Q 031016          154 SLNGI----AGFSELCKN  167 (167)
Q Consensus       154 ~~~~~----~~~~~y~as  167 (167)
                      +..+.    +++..|++|
T Consensus       161 ~~~~~~~~~~~~~~Y~as  178 (278)
T 3sx2_A          161 GLAGVGSADPGSVGYVAA  178 (278)
T ss_dssp             GTSCCCCSSHHHHHHHHH
T ss_pred             hcCCCccCCCCchHhHHH
Confidence            98887    777888864

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=6.1e-32  Score=200.37  Aligned_cols=152  Identities=24%  Similarity=0.254  Sum_probs=137.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++  ++..+.+.. .+.++.++.+|++|+++++++++++. +++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR-HGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT-TSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh-cCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999876  445556654 46678999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        79 ~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  154 (255)
T 2q2v_A           79 GVDILVNNAGI---QHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAA  154 (255)
T ss_dssp             SCSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHH
Confidence            99999999998   66678888999999999999999999999999999998878999999999999999999999864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=4.3e-32  Score=201.99  Aligned_cols=151  Identities=15%  Similarity=0.154  Sum_probs=130.9

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .|++++|+++||||++|||++++++|+++|++|++++|+.+...+..+.    .  .+.++.+|++++++++++++++. 
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~--~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ----A--GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH----H--TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh----c--CCeEEECCCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999988765433332    2  26789999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||.   ....+ .+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|+
T Consensus        96 ~~g~iD~lv~nAg~---~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  171 (260)
T 3gem_A           96 QTSSLRAVVHNASE---WLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYC  171 (260)
T ss_dssp             HCSCCSEEEECCCC---CCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHH
T ss_pred             hcCCCCEEEECCCc---cCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHH
Confidence            89999999999998   44444 567889999999999999999999999999998889999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       172 as  173 (260)
T 3gem_A          172 AT  173 (260)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=8.8e-32  Score=199.94  Aligned_cols=154  Identities=26%  Similarity=0.374  Sum_probs=139.6

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .|++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++    +.++.++.+|++|+++++++++++. 
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999998888777654    5579999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC----CceEEEecCCccccCCCC
Q 031016           86 SLGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG----KGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~g~iv~iss~~~~~~~~~  160 (167)
                      +++++|++|||||.   .. ..++.+.+.++|++.+++|+.+++++++.++|.|.+++    .|+||++||..+..+.++
T Consensus        80 ~~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  156 (261)
T 3n74_A           80 KFGKVDILVNNAGI---GHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN  156 (261)
T ss_dssp             HHSCCCEEEECCCC---CCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT
T ss_pred             hcCCCCEEEECCcc---CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC
Confidence            88999999999998   43 56788889999999999999999999999999998764    578999999999999999


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       157 ~~~Y~as  163 (261)
T 3n74_A          157 LAWYNAT  163 (261)
T ss_dssp             CHHHHHH
T ss_pred             ccHHHHH
Confidence            9999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-31  Score=201.66  Aligned_cols=153  Identities=22%  Similarity=0.267  Sum_probs=139.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC---cEEEEEeecCCHHHHHHHHHHHH-
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS---QVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. .+.   ++.++.+|++|+++++++++++. 
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK-SGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-TTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-cCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999888888887765 444   79999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCC----CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC-CC
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTN----FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI-AG  160 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~  160 (167)
                      +++++|++|||||.   ....+    +.+.+.++|++.+++|+.+++.+++.+.|.|.+++ |+||++||..+..+. ++
T Consensus        83 ~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  158 (280)
T 1xkq_A           83 QFGKIDVLVNNAGA---AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD  158 (280)
T ss_dssp             HHSCCCEEEECCCC---CCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS
T ss_pred             hcCCCCEEEECCCC---CCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc
Confidence            88999999999998   55555    77889999999999999999999999999998776 899999999998888 88


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       159 ~~~Y~as  165 (280)
T 1xkq_A          159 FLYYAIA  165 (280)
T ss_dssp             SHHHHHH
T ss_pred             ccHHHHH
Confidence            8999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-32  Score=199.39  Aligned_cols=150  Identities=23%  Similarity=0.295  Sum_probs=138.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+    +.++.++.+|++|+++++++++++. +++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999999988777766554    4578999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.+++..|++|
T Consensus        80 ~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~s  154 (253)
T 1hxh_A           80 TLNVLVNNAGI---LLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSAS  154 (253)
T ss_dssp             SCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHH
Confidence            99999999998   6677888999999999999999999999999999998877 999999999999999999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-32  Score=202.38  Aligned_cols=153  Identities=22%  Similarity=0.238  Sum_probs=128.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |.+++|+++||||++|||++++++|+++|++|++++|+++..++..+++    +.++.++.+|++|+++++++++++. +
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999988777766554    4578899999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCC----CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc------CCceEEEecCCcccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNF----TEISFDSFQKSIAISSLGAFLCAQQVLSGMVER------GKGTIIFTGCSASLN  156 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~  156 (167)
                      ++++|++|||||.   ....++    .+.+.++|++.+++|+.+++++++.+.|.|.++      +.|+||++||..+..
T Consensus        79 ~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tpc_A           79 FGHVHGLVNCAGT---APGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD  155 (257)
T ss_dssp             HSCCCEEEECCCC---CCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             cCCCCEEEECCCC---CCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence            9999999999998   444443    367899999999999999999999999999885      578999999999999


Q ss_pred             CCCCccccccC
Q 031016          157 GIAGFSELCKN  167 (167)
Q Consensus       157 ~~~~~~~y~as  167 (167)
                      +.+++..|++|
T Consensus       156 ~~~~~~~Y~as  166 (257)
T 3tpc_A          156 GQIGQAAYAAS  166 (257)
T ss_dssp             CCTTCHHHHHH
T ss_pred             CCCCCcchHHH
Confidence            99999999875

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-31  Score=198.31  Aligned_cols=148  Identities=21%  Similarity=0.237  Sum_probs=134.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++. ++..+.+.     + .++.+|++|+++++++++++. +++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999999998876 55555442     4 788999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        77 ~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  152 (256)
T 2d1y_A           77 RVDVLVNNAAI---AAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNAS  152 (256)
T ss_dssp             CCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHH
Confidence            99999999998   66778889999999999999999999999999999998878999999999999999999999874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-32  Score=198.42  Aligned_cols=149  Identities=21%  Similarity=0.310  Sum_probs=134.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|++++++++.+.    .+  +.++.+|++|+++++++++++. ++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA----VG--AHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TT--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----cC--CEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999999999998776655443    22  7788999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||.. ..+.+++..|++|
T Consensus        76 g~id~lvn~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~as  151 (245)
T 1uls_A           76 GRLDGVVHYAGI---TRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAAS  151 (245)
T ss_dssp             SSCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHH
Confidence            999999999998   667788899999999999999999999999999999988789999999999 8888999999864

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=7.4e-32  Score=202.36  Aligned_cols=152  Identities=26%  Similarity=0.319  Sum_probs=139.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.    .+.++.++.+|++|+++++++++++. ++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA----YPDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH----CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            34689999999999999999999999999999999998887766553    45689999999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|++|
T Consensus        78 g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (281)
T 3m1a_A           78 GRVDVLVNNAGR---TQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSAT  154 (281)
T ss_dssp             SCCSEEEECCCC---EEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCCEEEECCCc---CCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHH
Confidence            999999999998   67788899999999999999999999999999999999888999999999999999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.98  E-value=1.3e-31  Score=202.69  Aligned_cols=154  Identities=19%  Similarity=0.217  Sum_probs=137.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.  +..+++.+.++. .+.++.++.+|++|+++++++++++.
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-CGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-TTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            346799999999999999999999999999999998863  445666666665 67789999999999999999999999


Q ss_pred             -hcCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                       +++++|++|||||.   .. ..++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+..+.+++..
T Consensus       124 ~~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~  198 (294)
T 3r3s_A          124 EALGGLDILALVAGK---QTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLD  198 (294)
T ss_dssp             HHHTCCCEEEECCCC---CCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHH
T ss_pred             HHcCCCCEEEECCCC---cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchH
Confidence             89999999999998   33 567889999999999999999999999999999965  479999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       199 Y~as  202 (294)
T 3r3s_A          199 YAAT  202 (294)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.98  E-value=1e-31  Score=200.21  Aligned_cols=156  Identities=18%  Similarity=0.236  Sum_probs=140.8

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhH-HHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRL-SRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.+.. ++..+++....+.++.++.+|++|+++++++++++.
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            4689999999999  9999999999999999999998876554 666666665467889999999999999999999999


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC--CCcc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI--AGFS  162 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~~  162 (167)
                       +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.  +++.
T Consensus        97 ~~~g~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  173 (267)
T 3gdg_A           97 ADFGQIDAFIANAGA---TADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQT  173 (267)
T ss_dssp             HHTSCCSEEEECCCC---CCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCH
T ss_pred             HHcCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCC
Confidence             89999999999999   67778889999999999999999999999999999999888999999999998776  5788


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       174 ~Y~~s  178 (267)
T 3gdg_A          174 SYNVA  178 (267)
T ss_dssp             HHHHH
T ss_pred             cchHH
Confidence            89864

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.98  E-value=1.1e-31  Score=201.08  Aligned_cols=152  Identities=19%  Similarity=0.320  Sum_probs=138.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++ |+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. . .++.++.+|++|+++++++++++. +++
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-K-TRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-T-SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-C-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            45 8999999999999999999999999999999999888888777754 2 578999999999999999999988 889


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCc-eEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKG-TIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++|++|||||.   .. ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.| +||++||..+..+.+++..|++
T Consensus        97 ~iD~lvnnAG~---~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~a  173 (272)
T 2nwq_A           97 TLRGLINNAGL---ALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGG  173 (272)
T ss_dssp             SCCEEEECCCC---CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCEEEECCCC---CCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHH
Confidence            99999999998   44 3788899999999999999999999999999999988778 9999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       174 s  174 (272)
T 2nwq_A          174 T  174 (272)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.98  E-value=9.6e-32  Score=198.79  Aligned_cols=148  Identities=24%  Similarity=0.357  Sum_probs=135.2

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~   91 (167)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+.+    +.++.++.+|++|+++++++++++. +++++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            67999999999999999999999999999999988777766654    3478999999999999999999988 889999


Q ss_pred             EEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||||.   . ...++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        77 ~lvnnAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  150 (248)
T 3asu_A           77 ILVNNAGL---ALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGAT  150 (248)
T ss_dssp             EEEECCCC---CCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             EEEECCCc---CCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHH
Confidence            99999998   4 3567888999999999999999999999999999988878999999999999999999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.98  E-value=2e-31  Score=201.77  Aligned_cols=157  Identities=18%  Similarity=0.168  Sum_probs=138.0

Q ss_pred             CCCCCCCCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      |.+.+.+++|+++||||++  |||++++++|+++|++|++++|+++..+...+.... .+ .+.++.+|++|++++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-LG-VKLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-HT-CCEEEECCTTCHHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-cC-CeEEEEcCCCCHHHHHHHH
Confidence            4445567899999999997  999999999999999999999997665555544443 33 4688999999999999999


Q ss_pred             HHHH-hcCCccEEEEcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           82 EGVL-SLGFVEVLVYNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        82 ~~~~-~~~~i~~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      +++. +++++|++|||||+   ...    .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+..
T Consensus       100 ~~~~~~~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~  174 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAF---SDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEK  174 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCC---CCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTS
T ss_pred             HHHHHHcCCCCEEEECCCc---CCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhcc
Confidence            9999 89999999999998   543    67889999999999999999999999999999976  58999999999999


Q ss_pred             CCCCccccccC
Q 031016          157 GIAGFSELCKN  167 (167)
Q Consensus       157 ~~~~~~~y~as  167 (167)
                      +.+++..|++|
T Consensus       175 ~~~~~~~Y~as  185 (296)
T 3k31_A          175 VVPHYNVMGVC  185 (296)
T ss_dssp             CCTTTTHHHHH
T ss_pred             CCCCchhhHHH
Confidence            99999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.98  E-value=1e-31  Score=200.89  Aligned_cols=147  Identities=19%  Similarity=0.241  Sum_probs=133.3

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ....++|+++||||++|||++++++|+++|++|++++|+.+..           ......+.+|++|+++++++++++. 
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------VNVSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------TTSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------cCceeEEEecCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999986532           2256778999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|+
T Consensus        78 ~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (269)
T 3vtz_A           78 KYGRIDILVNNAGI---EQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYV  154 (269)
T ss_dssp             HHSCCCEEEECCCC---CCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHH
T ss_pred             HcCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHH
Confidence            89999999999999   677889999999999999999999999999999999998889999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       155 as  156 (269)
T 3vtz_A          155 TS  156 (269)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.98  E-value=1.3e-31  Score=200.67  Aligned_cols=154  Identities=22%  Similarity=0.318  Sum_probs=131.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||++|||++++++|+++|++|++++|++++++++.+.+...  .+.++.++.+|++|+++++++++++. +
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998888887777310  34578999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCC----CHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc-ccCCCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEI----SFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS-LNGIAGF  161 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~  161 (167)
                      ++++|++|||||.   ....++.+.    +.++|++.+++|+.+++.+++.+.|.|++++ |+||++||..+ ..+.+++
T Consensus        84 ~g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           84 FGKLDILVNNAGA---AIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HSCCCEEEECCC----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred             cCCCCEEEECCCC---CCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence            9999999999998   566677777    9999999999999999999999999998776 89999999998 8888999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       160 ~~Y~~s  165 (278)
T 1spx_A          160 PYYSIA  165 (278)
T ss_dssp             HHHHHH
T ss_pred             cHHHHH
Confidence            999864

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.98  E-value=2.7e-31  Score=196.92  Aligned_cols=149  Identities=17%  Similarity=0.236  Sum_probs=135.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +|+++||||++|||++++++|+++|  ++|++.+|+++.++++.+.+    +.++.++.+|++|+++++++++++. +++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            6999999999999999999999985  68888999988877776654    4579999999999999999999999 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.  ..+..++.+.+.++|++.+++|+.+++++++.++|.|++++ |+||++||..+..+.+++..|++|
T Consensus        78 ~id~lvnnAg~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~as  153 (254)
T 3kzv_A           78 KIDSLVANAGV--LEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSS  153 (254)
T ss_dssp             CCCEEEEECCC--CCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHH
T ss_pred             CccEEEECCcc--cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHH
Confidence            99999999998  12347888999999999999999999999999999998876 899999999999999999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.98  E-value=1.7e-31  Score=201.22  Aligned_cols=157  Identities=20%  Similarity=0.261  Sum_probs=135.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCC----HHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSD----SRSVREAFE   82 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~----~~~~~~~~~   82 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+. +.++++.+.+....+.++.++.+|+++    +++++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            346789999999999999999999999999999999998 778888887763256789999999999    999999999


Q ss_pred             HHH-hcCCccEEEEcCCCCCCCCCCCC-----CC-----CCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC------Cce
Q 031016           83 GVL-SLGFVEVLVYNAYQPVSWQPTNF-----TE-----ISFDSFQKSIAISSLGAFLCAQQVLSGMVERG------KGT  145 (167)
Q Consensus        83 ~~~-~~~~i~~lv~~ag~~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~  145 (167)
                      ++. +++++|++|||||.   ....++     .+     .+.++|++.+++|+.+++.+++.++|.|.+++      .|+
T Consensus        99 ~~~~~~g~iD~lvnnAG~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~  175 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASA---FYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLS  175 (288)
T ss_dssp             HHHHHHSCCCEEEECCCC---CCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEE
T ss_pred             HHHHhcCCCCEEEECCCC---CCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeE
Confidence            998 88999999999998   555566     56     88899999999999999999999999998866      689


Q ss_pred             EEEecCCccccCCCCccccccC
Q 031016          146 IIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus       146 iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||++||..+..+.+++..|++|
T Consensus       176 iv~isS~~~~~~~~~~~~Y~as  197 (288)
T 2x9g_A          176 IVNLCDAMVDQPCMAFSLYNMG  197 (288)
T ss_dssp             EEEECCTTTTSCCTTCHHHHHH
T ss_pred             EEEEecccccCCCCCCchHHHH
Confidence            9999999999999999999875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.98  E-value=5.4e-32  Score=207.03  Aligned_cols=154  Identities=23%  Similarity=0.253  Sum_probs=141.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC----------hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD----------LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   79 (167)
                      +++|+++||||++|||+++|++|+++|++|++++|+          .+.++++.+++.. .+.++.++.+|++|++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-AGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-TTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHH
Confidence            578999999999999999999999999999999987          6778888888877 67789999999999999999


Q ss_pred             HHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC------CceEEEecCC
Q 031016           80 AFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG------KGTIIFTGCS  152 (167)
Q Consensus        80 ~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~iss~  152 (167)
                      +++++. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+.+      .|+||++||.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI---VRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC---CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHcCCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            999999 89999999999999   6778889999999999999999999999999999998643      3799999999


Q ss_pred             ccccCCCCccccccC
Q 031016          153 ASLNGIAGFSELCKN  167 (167)
Q Consensus       153 ~~~~~~~~~~~y~as  167 (167)
                      .+..+.+++..|++|
T Consensus       181 ~~~~~~~~~~~Y~as  195 (322)
T 3qlj_A          181 AGLQGSVGQGNYSAA  195 (322)
T ss_dssp             HHHHCBTTCHHHHHH
T ss_pred             HHccCCCCCccHHHH
Confidence            999999999999875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.98  E-value=1.8e-31  Score=199.81  Aligned_cols=154  Identities=18%  Similarity=0.213  Sum_probs=133.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCH----HHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDS----RSVREAFEGV   84 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~----~~~~~~~~~~   84 (167)
                      +++|+++||||++|||++++++|+++|++|++++| +++.++++.+.+....+.++.++.+|++|+    ++++++++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            56899999999999999999999999999999999 888888888887662367899999999999    9999999999


Q ss_pred             H-hcCCccEEEEcCCCCCCCCCCCCCCCCH-----------HHHHHHhhhhhHHHHHHHHHHHHhhHhcCC------ceE
Q 031016           85 L-SLGFVEVLVYNAYQPVSWQPTNFTEISF-----------DSFQKSIAISSLGAFLCAQQVLSGMVERGK------GTI  146 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------g~i  146 (167)
                      . +++++|++|||||.   ....++.+.+.           ++|++.+++|+.+++++++.++|.|. ++.      |+|
T Consensus        89 ~~~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~i  164 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASA---YYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHSCCCEEEECCCC---CCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEE
T ss_pred             HHhcCCCCEEEECCCC---CCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEE
Confidence            8 88999999999998   56677888888           99999999999999999999999998 555      899


Q ss_pred             EEecCCccccCCCCccccccC
Q 031016          147 IFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus       147 v~iss~~~~~~~~~~~~y~as  167 (167)
                      |++||..+..+.+++..|++|
T Consensus       165 v~isS~~~~~~~~~~~~Y~as  185 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMA  185 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHH
T ss_pred             EEECchhhcCCCCCCeehHHH
Confidence            999999999999999999874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.98  E-value=6.9e-32  Score=204.45  Aligned_cols=151  Identities=14%  Similarity=0.197  Sum_probs=130.3

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~-   85 (167)
                      ...++|+++||||++|||++++++|+++|++|++++|+.++.++..+.+....+.++.++.+|++++ ++++++++.+. 
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999999888888774556899999999998 99999999998 


Q ss_pred             hcCCccEEEEcCCCCCCC---------------------------CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 031016           86 SLGFVEVLVYNAYQPVSW---------------------------QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGM  138 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~---------------------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  138 (167)
                      +++++|++|||||+....                           ...++.+.+.++|++.+++|+.+++.+++.++|.|
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            889999999999982100                           11245577899999999999999999999999999


Q ss_pred             HhcCCceEEEecCCccccCC
Q 031016          139 VERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus       139 ~~~~~g~iv~iss~~~~~~~  158 (167)
                      ++++.|+||++||..+..+.
T Consensus       168 ~~~~~~~IV~isS~~~~~~~  187 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKY  187 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGG
T ss_pred             ccCCCCeEEEEecCCccccc
Confidence            98888999999999987654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.98  E-value=3.6e-31  Score=199.90  Aligned_cols=154  Identities=20%  Similarity=0.283  Sum_probs=136.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+. .++..+.++. .+.++.++.+|++|+++++++++++. +
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-EGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-TTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998764 4455555555 67789999999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.  .....++.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.+++..|++
T Consensus       123 ~g~iD~lvnnAg~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  198 (291)
T 3ijr_A          123 LGSLNILVNNVAQ--QYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSA  198 (291)
T ss_dssp             HSSCCEEEECCCC--CCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHH
T ss_pred             cCCCCEEEECCCC--cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHH
Confidence            9999999999998  124467888999999999999999999999999999965  479999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       199 s  199 (291)
T 3ijr_A          199 T  199 (291)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.98  E-value=2.1e-31  Score=198.72  Aligned_cols=156  Identities=20%  Similarity=0.269  Sum_probs=140.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ..+.+|+++||||++|||++++++|+++|++|+++ .|+.+..++..+.+.. .+.++.++.+|++|+++++++++++. 
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVA-NGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999665 5777778888888877 67789999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhH-hcCCceEEEecCCccccCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMV-ERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+++.|. +++.|+||++||..+..+.+++..|
T Consensus       101 ~~g~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  177 (267)
T 4iiu_A          101 QHGAWYGVVSNAGI---ARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNY  177 (267)
T ss_dssp             HHCCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HhCCccEEEECCCC---CCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchh
Confidence            88999999999999   6778888999999999999999999999999999886 5567999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       178 ~as  180 (267)
T 4iiu_A          178 SAA  180 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=3.1e-31  Score=198.34  Aligned_cols=156  Identities=21%  Similarity=0.289  Sum_probs=142.3

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++||||++|||++++++|+++|++|++++|+++..+++.++++. .+.++.++.+|++|+++++++++++. +
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh-cCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999888888888876 56789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++
T Consensus       106 ~g~iD~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  182 (272)
T 1yb1_A          106 IGDVSILVNNAGV---VYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCS  182 (272)
T ss_dssp             TCCCSEEEECCCC---CCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHH
T ss_pred             CCCCcEEEECCCc---CCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHH
Confidence            8999999999998   6667788888999999999999999999999999999888899999999999888888888876


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       183 s  183 (272)
T 1yb1_A          183 S  183 (272)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.97  E-value=3.8e-31  Score=202.89  Aligned_cols=155  Identities=17%  Similarity=0.246  Sum_probs=139.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHH-------------
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSR-------------   75 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-------------   75 (167)
                      +.+|+++||||++|||++++++|+++|++|++++ |+.+.++++.+.+....+.++.++.+|+++++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            5789999999999999999999999999999999 99988888888876325678999999999999             


Q ss_pred             ----HHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCC--------------HHHHHHHhhhhhHHHHHHHHHHHH
Q 031016           76 ----SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEIS--------------FDSFQKSIAISSLGAFLCAQQVLS  136 (167)
Q Consensus        76 ----~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  136 (167)
                          +++++++++. +++++|+||||||+   ....++.+.+              .++|+..+++|+.+++.+++.++|
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~---~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASS---FYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCC---CCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCC---CCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                9999999998 89999999999998   6667788888              999999999999999999999999


Q ss_pred             hhHhcC------CceEEEecCCccccCCCCccccccC
Q 031016          137 GMVERG------KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus       137 ~~~~~~------~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      .|.+++      .|+||++||..+..+.+++..|++|
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  237 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA  237 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHH
Confidence            998876      7999999999999999999999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.97  E-value=5e-31  Score=196.25  Aligned_cols=157  Identities=18%  Similarity=0.151  Sum_probs=130.1

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+.. .+.++.++.+|++++++++++++++. 
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            3556899999999999999999999999999999999999888888887766 56689999999999999999999998 


Q ss_pred             hc-CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 SL-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 ~~-~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      .+ +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+++..|
T Consensus        88 ~~~~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  164 (266)
T 1xq1_A           88 MFGGKLDILINNLGA---IRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIY  164 (266)
T ss_dssp             HHTTCCSEEEEECCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHH
T ss_pred             HhCCCCcEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchH
Confidence            77 899999999998   66678888999999999999999999999999999988878999999999999888888889


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       165 ~~s  167 (266)
T 1xq1_A          165 SAT  167 (266)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.97  E-value=4.5e-31  Score=198.44  Aligned_cols=151  Identities=22%  Similarity=0.325  Sum_probs=133.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.    .+.++.++.+|++++++++++++++. ++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA----HGGNAVGVVGDVRSLQDQKRAAERCLAAF   77 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH----cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999999999998877766544    45689999999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCC-CCC----CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           88 GFVEVLVYNAYQPVSWQP-TNF----TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~-~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      +++|++|||||+   ... .++    .+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.+++.
T Consensus        78 g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  153 (281)
T 3zv4_A           78 GKIDTLIPNAGI---WDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGP  153 (281)
T ss_dssp             SCCCEEECCCCC---CCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCH
T ss_pred             CCCCEEEECCCc---CccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCc
Confidence            999999999998   322 232    3455678999999999999999999999998764 8999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       154 ~Y~as  158 (281)
T 3zv4_A          154 LYTAT  158 (281)
T ss_dssp             HHHHH
T ss_pred             hhHHH
Confidence            99875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=1.1e-30  Score=193.64  Aligned_cols=156  Identities=21%  Similarity=0.226  Sum_probs=141.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+.++. .+.++.++.+|++|+++++++++++. +
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-EGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999998888888887766 56789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc--cc
Q 031016           87 LGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF--SE  163 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~  163 (167)
                      ++++|++|||||.   .. ..++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.++.  ..
T Consensus        88 ~~~id~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~  164 (260)
T 3awd_A           88 EGRVDILVACAGI---CISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAA  164 (260)
T ss_dssp             HSCCCEEEECCCC---CCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHH
T ss_pred             cCCCCEEEECCCC---CCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccc
Confidence            8999999999998   44 667888999999999999999999999999999988778999999999998887776  78


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       165 Y~~s  168 (260)
T 3awd_A          165 YNAS  168 (260)
T ss_dssp             HHHH
T ss_pred             cHHH
Confidence            8764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.97  E-value=8.2e-31  Score=192.75  Aligned_cols=152  Identities=24%  Similarity=0.342  Sum_probs=140.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      +|+++||||++|||++++++|+++|+       +|++++|+.+.++++.+.+.. .+.++.++.+|++++++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc-cCCeeeEEEecCCCHHHHHHHHHHH
Confidence            68999999999999999999999999       999999998888888877765 5678999999999999999999999


Q ss_pred             H-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccc
Q 031016           85 L-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                      . +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...
T Consensus        81 ~~~~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  157 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGV---GRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSI  157 (244)
T ss_dssp             HHHTSCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHhCCCCCEEEEcCCc---CCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCch
Confidence            8 88999999999998   6677888899999999999999999999999999998877899999999999999999999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       158 Y~~s  161 (244)
T 2bd0_A          158 YCMS  161 (244)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            9864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.97  E-value=8.9e-31  Score=197.06  Aligned_cols=156  Identities=21%  Similarity=0.252  Sum_probs=143.0

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+++|+++||||++|||++++++|+++|++|++.+|+++.++++.+.++. .+.++.++.+|++|+++++++++++. +
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-cCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999998888888887766 56789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+++..|++
T Consensus       119 ~~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  195 (285)
T 2c07_A          119 HKNVDILVNNAGI---TRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  195 (285)
T ss_dssp             CSCCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             cCCCCEEEECCCC---CCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHH
Confidence            8999999999998   6677888999999999999999999999999999998877899999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       196 s  196 (285)
T 2c07_A          196 S  196 (285)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=4.7e-31  Score=197.34  Aligned_cols=151  Identities=19%  Similarity=0.288  Sum_probs=134.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+     .++.++.+|++|+++++++++++. +
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999988776665543     237889999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++++|++|||||.   .. ..++.+.+.++|++.+++|+.+++++++.+.|.|.++ .|+||++||..+..+.+++..|+
T Consensus        80 ~g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  155 (270)
T 1yde_A           80 FGRLDCVVNNAGH---HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYV  155 (270)
T ss_dssp             HSCCCEEEECCCC---CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHH
T ss_pred             cCCCCEEEECCCC---CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccH
Confidence            9999999999998   43 4678889999999999999999999999999999775 48999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       156 as  157 (270)
T 1yde_A          156 AT  157 (270)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.97  E-value=3.4e-31  Score=194.98  Aligned_cols=155  Identities=21%  Similarity=0.291  Sum_probs=119.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ++++|+++|||+++|||++++++|+++|++|+++ .|+++.++++.+.+.. .+.++.++.+|++|+++++++++++. +
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA-AGINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH-TTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999998 6777777777777766 56789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+++..|++
T Consensus        81 ~~~~d~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  157 (247)
T 2hq1_A           81 FGRIDILVNNAGI---TRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAA  157 (247)
T ss_dssp             HSCCCEEEECC------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHH
T ss_pred             cCCCCEEEECCCC---CCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHH
Confidence            8999999999998   5666778888999999999999999999999999998887899999999999989888888986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       158 s  158 (247)
T 2hq1_A          158 S  158 (247)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.97  E-value=1.2e-30  Score=192.44  Aligned_cols=152  Identities=27%  Similarity=0.372  Sum_probs=138.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH-HhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI-AREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      +|+++||||++|||++++++|+++|++|++++|+++.++++.+.+ .. .+.++.++.+|++|+++++++++++. ++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA-YADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT-TGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988888777776 33 45679999999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCC---CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           90 VEVLVYNAYQPVSWQPTN---FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|++|||||.   ....+   +.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++
T Consensus        81 id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  157 (250)
T 2cfc_A           81 IDVLVNNAGI---TGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTT  157 (250)
T ss_dssp             CCEEEECCCC---CCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCEEEECCCC---CCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHH
Confidence            9999999998   44455   78889999999999999999999999999999887899999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       158 s  158 (250)
T 2cfc_A          158 S  158 (250)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.97  E-value=7.7e-31  Score=195.13  Aligned_cols=156  Identities=17%  Similarity=0.237  Sum_probs=134.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ..+|+++||||++|||++++++|+++|++|++++|+... .+.+.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD-VEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG-GGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            357999999999999999999999999999999776544 4455555444 56789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC-cc-ccCCCCccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS-AS-LNGIAGFSELC  165 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~-~~-~~~~~~~~~y~  165 (167)
                      +++|++|||||... ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||. .+ ..+.++...|+
T Consensus        84 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  162 (264)
T 3i4f_A           84 GKIDFLINNAGPYV-FERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA  162 (264)
T ss_dssp             SCCCEEECCCCCCC-CSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred             CCCCEEEECCcccc-cCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence            99999999999311 55678889999999999999999999999999999999888999999998 44 56777888898


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       163 as  164 (264)
T 3i4f_A          163 AA  164 (264)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.97  E-value=1.3e-30  Score=196.05  Aligned_cols=153  Identities=15%  Similarity=0.268  Sum_probs=136.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+. .+++.+.+.. .+.++.++.+|++++++++++++++. +
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH-hCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999998654 5566666665 67789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC-ccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG-FSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~y~  165 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.+.|.|.  +.|+||++||..+..+.++ +..|+
T Consensus       105 ~g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~  179 (283)
T 1g0o_A          105 FGKLDIVCSNSGV---VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVYS  179 (283)
T ss_dssp             HSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHHH
T ss_pred             cCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCCCcchH
Confidence            8999999999998   6667888999999999999999999999999999993  4589999999999888764 88898


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       180 as  181 (283)
T 1g0o_A          180 GS  181 (283)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=1.8e-30  Score=191.91  Aligned_cols=155  Identities=25%  Similarity=0.337  Sum_probs=140.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||+++||++++++|+++|++|++++|+++.++++.+.++. .+.++.++.+|++|+++++++++++. +
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999999888888888776 56789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++ +.+.++|+..+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+++..|++
T Consensus        86 ~~~~d~vi~~Ag~---~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  161 (255)
T 1fmc_A           86 LGKVDILVNNAGG---GGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             HSSCCEEEECCCC---CCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             cCCCCEEEECCCC---CCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            8999999999998   555555 688999999999999999999999999998887899999999999999889889986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       162 s  162 (255)
T 1fmc_A          162 S  162 (255)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.97  E-value=1.5e-30  Score=193.12  Aligned_cols=154  Identities=23%  Similarity=0.314  Sum_probs=141.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||++++++|+++|++|++++| +++.++++.+.+.. .+.++.++.+|++++++++++++++. ++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999 77777777777766 56789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+++..|++
T Consensus        84 g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (261)
T 1gee_A           84 GKLDVMINNAGL---ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             SCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence            999999999998   6667788899999999999999999999999999999876 789999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       161 s  161 (261)
T 1gee_A          161 S  161 (261)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=7.7e-31  Score=193.11  Aligned_cols=156  Identities=23%  Similarity=0.339  Sum_probs=141.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||+++||++++++|+++|++|++++|+++.++++.+.+....+.++.++.+|++|+++++++++++. ++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35689999999999999999999999999999999998888877777654346689999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++|
T Consensus        84 ~~~d~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  160 (248)
T 2pnf_A           84 DGIDILVNNAGI---TRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTT  160 (248)
T ss_dssp             SCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHH
Confidence            999999999998   66677888999999999999999999999999999998878999999999988888888888864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.97  E-value=7.6e-31  Score=194.84  Aligned_cols=156  Identities=15%  Similarity=0.240  Sum_probs=138.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHH---cCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAH---EGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      ++++|+++||||++|||++++++|++   +|++|++++|+++.++++.+.+.... +.++.++.+|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999   89999999999988888888876522 568999999999999999999988


Q ss_pred             H---hcCCcc--EEEEcCCCCCCCCC--CCCCC-CCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEecCCcc
Q 031016           85 L---SLGFVE--VLVYNAYQPVSWQP--TNFTE-ISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTGCSAS  154 (167)
Q Consensus        85 ~---~~~~i~--~lv~~ag~~~~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss~~~  154 (167)
                      .   .++++|  ++|||||.   ...  .++.+ .+.++|++.+++|+.+++++++.++|.|.++  +.|+||++||..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~---~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAAT---LGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCC---CCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HhccccccCCccEEEECCcc---cCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh
Confidence            6   247888  99999998   432  46777 7899999999999999999999999999886  5689999999999


Q ss_pred             ccCCCCccccccC
Q 031016          155 LNGIAGFSELCKN  167 (167)
Q Consensus       155 ~~~~~~~~~y~as  167 (167)
                      ..+.+++..|++|
T Consensus       160 ~~~~~~~~~Y~as  172 (259)
T 1oaa_A          160 LQPYKGWGLYCAG  172 (259)
T ss_dssp             TSCCTTCHHHHHH
T ss_pred             cCCCCCccHHHHH
Confidence            9999999999875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=6.5e-31  Score=195.92  Aligned_cols=148  Identities=21%  Similarity=0.356  Sum_probs=130.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+    ..++.++.+|++|+++++++++++. +++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999988777665543    3578899999999999999999998 899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.| ++ .|+||++||..+. +.+++..|++|
T Consensus        80 ~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~as  152 (263)
T 2a4k_A           80 RLHGVAHFAGV---AHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAG  152 (263)
T ss_dssp             CCCEEEEGGGG---TTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHC
T ss_pred             CCcEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHH
Confidence            99999999998   667788899999999999999999999999999999 54 6899999999998 87888889875

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.97  E-value=7.8e-31  Score=196.11  Aligned_cols=153  Identities=20%  Similarity=0.337  Sum_probs=137.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      .+|+++||||++|||+++|++|+++|++|+++ .|+.+.++++.+.+.. .+.++.++.+|++|+++++++++++. +++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-SGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999999887 7788888888888876 67889999999999999999999999 889


Q ss_pred             CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc---CCceEEEecCCccccCCC-Cccc
Q 031016           89 FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER---GKGTIIFTGCSASLNGIA-GFSE  163 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~-~~~~  163 (167)
                      ++|++|||||.   .. ..++.+.+.++|++.+++|+.+++.+++.++|.|.++   +.|+||++||..+..+.+ ++..
T Consensus       104 ~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  180 (272)
T 4e3z_A          104 RLDGLVNNAGI---VDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVD  180 (272)
T ss_dssp             CCCEEEECCCC---CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHH
T ss_pred             CCCEEEECCCC---CCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcch
Confidence            99999999998   44 3788899999999999999999999999999999773   468999999999988876 6788


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       181 Y~as  184 (272)
T 4e3z_A          181 YAAS  184 (272)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            8864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.97  E-value=1.6e-30  Score=191.84  Aligned_cols=153  Identities=23%  Similarity=0.259  Sum_probs=139.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.+++..+.+.. . .++.++.+|++|+++++++++++. +++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-P-DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-T-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-c-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5689999999999999999999999999999999998887777766643 2 578999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++. ++||++||..+..+.+++..|++|
T Consensus        82 ~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  158 (251)
T 1zk4_A           82 PVSTLVNNAGI---AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNAS  158 (251)
T ss_dssp             SCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHH
Confidence            99999999998   66778889999999999999999999999999999988776 899999999999999999999864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.97  E-value=3.3e-31  Score=197.82  Aligned_cols=145  Identities=17%  Similarity=0.228  Sum_probs=130.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+.+...            ....+.+|++++++++++++++. +
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------ADLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence            3567999999999999999999999999999999999765321            12445789999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..+.+++..|++
T Consensus        92 ~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  168 (266)
T 3uxy_A           92 LGRLDIVVNNAGV---ISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCL  168 (266)
T ss_dssp             HSCCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHH
T ss_pred             cCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHH
Confidence            9999999999999   6778889999999999999999999999999999999988899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       169 s  169 (266)
T 3uxy_A          169 T  169 (266)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=2.6e-30  Score=195.63  Aligned_cols=159  Identities=16%  Similarity=0.208  Sum_probs=143.4

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+....+.++.++.+|++|+++++++++++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            34557899999999999999999999999999999999999888888887766336789999999999999999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh-cCCceEEEecCCccccCCCCccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE-RGKGTIIFTGCSASLNGIAGFSE  163 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~  163 (167)
                       +++++|++|||||.   ....++.+.+.++|+..+++|+.+++.+++.+.|.|.+ ++.++||++||..+..+.+++..
T Consensus       100 ~~~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  176 (302)
T 1w6u_A          100 KVAGHPNIVINNAAG---NFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP  176 (302)
T ss_dssp             HHTCSCSEEEECCCC---CCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHH
T ss_pred             HHcCCCCEEEECCCC---CCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcch
Confidence             88999999999998   66678888999999999999999999999999999974 44689999999999999899999


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       177 Y~~s  180 (302)
T 1w6u_A          177 SASA  180 (302)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            9864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.97  E-value=9.4e-31  Score=195.11  Aligned_cols=144  Identities=17%  Similarity=0.250  Sum_probs=132.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.            +.++.++.+|++|+++++++++++. ++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999997653            3467889999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        73 g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  149 (264)
T 2dtx_A           73 GSISVLVNNAGI---ESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTS  149 (264)
T ss_dssp             SCCCEEEECCCC---CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHH
Confidence            999999999998   66778889999999999999999999999999999998878999999999999999999999874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.97  E-value=3e-30  Score=195.11  Aligned_cols=152  Identities=16%  Similarity=0.146  Sum_probs=133.2

Q ss_pred             CCCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++||||++  |||++++++|+++|++|++++|+++..+...+..+. . .++.++.+|++|+++++++++++. 
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE-L-GAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH-H-TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-c-CCceEEECCCCCHHHHHHHHHHHHH
Confidence            36799999999995  599999999999999999999986544443333333 3 368899999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +++++|++|||||+   ..    ..++.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+++
T Consensus       106 ~~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~  180 (293)
T 3grk_A          106 KWGKLDFLVHAIGF---SDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNY  180 (293)
T ss_dssp             HTSCCSEEEECCCC---CCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTT
T ss_pred             hcCCCCEEEECCcc---CCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCch
Confidence            89999999999998   54    568889999999999999999999999999999976  5899999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       181 ~~Y~as  186 (293)
T 3grk_A          181 NVMGVA  186 (293)
T ss_dssp             THHHHH
T ss_pred             HHHHHH
Confidence            999875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=1.4e-30  Score=191.36  Aligned_cols=152  Identities=22%  Similarity=0.326  Sum_probs=139.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      +|+++||||++|||++++++|+++|++|+++ +|+++..+++.+.++. .+.++.++.+|++++++++++++++. ++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5889999999999999999999999999885 7888888887777766 56789999999999999999999998 8999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        80 id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (244)
T 1edo_A           80 IDVVVNNAGI---TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAA  154 (244)
T ss_dssp             CSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             CCEEEECCCC---CCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhh
Confidence            9999999998   66678888999999999999999999999999999998878999999999998898999999864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.97  E-value=1.8e-30  Score=192.99  Aligned_cols=155  Identities=26%  Similarity=0.322  Sum_probs=135.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h-c
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S-L   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~-~   87 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. .+.++.++.+|++|+++++++++++. + +
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS-LGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-cCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999999888888888876 56789999999999999999999987 5 8


Q ss_pred             CCccEEEEcCCCCCCC-----CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           88 GFVEVLVYNAYQPVSW-----QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      +++|++|||||... .     ...++.+.+.++|++.+++|+.+++++++.+.|.|.+++.|+||++||..+..+. +..
T Consensus        82 g~id~lvnnAg~g~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           82 GRLDVLVNNAYAGV-QTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             TCCCEEEECCCTTH-HHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred             CCceEEEECCcccc-ccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence            99999999995300 2     3457788899999999999999999999999999988878999999999887654 357


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       160 ~Y~as  164 (260)
T 2qq5_A          160 PYGVG  164 (260)
T ss_dssp             HHHHH
T ss_pred             chHHH
Confidence            78764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=5.6e-31  Score=215.89  Aligned_cols=153  Identities=20%  Similarity=0.241  Sum_probs=135.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh---------hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL---------GRLSRFADEIAREEKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   78 (167)
                      +++++|+++||||++|||+++|++|+++|++|++.+++.         +.++++.+++.. .+.+.   .+|++|.++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~-~g~~~---~~d~~d~~~~~   79 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK-NGGVA---VADYNNVLDGD   79 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHH-TTCEE---EEECCCTTCHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHh-cCCeE---EEEcCCHHHHH
Confidence            356799999999999999999999999999999988754         567777777765 44443   36888888889


Q ss_pred             HHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           79 EAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        79 ~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ++++++. ++|+||+||||||+   ....++.+.+.++|++++++|+.++|+++|+++|+|++++.|+||++||.++..+
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~  156 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGI---LRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYG  156 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence            9999988 89999999999999   6677899999999999999999999999999999999888899999999999999


Q ss_pred             CCCccccccC
Q 031016          158 IAGFSELCKN  167 (167)
Q Consensus       158 ~~~~~~y~as  167 (167)
                      .+++..|++|
T Consensus       157 ~~~~~~Y~as  166 (604)
T 2et6_A          157 NFGQANYASA  166 (604)
T ss_dssp             CTTBHHHHHH
T ss_pred             CCCchHHHHH
Confidence            9999999975

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.97  E-value=2.5e-30  Score=191.21  Aligned_cols=146  Identities=18%  Similarity=0.215  Sum_probs=132.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |++++|+++||||++|||++++++|+++|++|++++|+++.        +. .+  +.++.+|++|+++++++++++. +
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-~~--~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-YP--FATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-CS--SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-CC--ceEEEcCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999998652        11 22  7788999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|++
T Consensus        72 ~g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~  148 (250)
T 2fwm_X           72 TERLDALVNAAGI---LRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGA  148 (250)
T ss_dssp             CSCCCEEEECCCC---CCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCc---CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHH
Confidence            9999999999998   6677888999999999999999999999999999999887899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       149 s  149 (250)
T 2fwm_X          149 S  149 (250)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.97  E-value=7.9e-30  Score=188.42  Aligned_cols=153  Identities=24%  Similarity=0.280  Sum_probs=136.6

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcE-EEEEeecCCHHHHHHHHHHHHh
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQV-FAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+    +.++ .++.+|++|+++++++++++.+
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL----GAAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----cccceeEEEEecCCHHHHHHHHHHHHh
Confidence            4567999999999999999999999999999999999988777766655    3356 8899999999999999988765


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc--ccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF--SEL  164 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y  164 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++.  ..|
T Consensus        83 ~~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           83 VAPVSILVNSAGI---ARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             HSCCCEEEECCCC---CCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             hCCCcEEEECCcc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence            6899999999998   66678888999999999999999999999999999998888999999999998888777  788


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       160 ~~s  162 (254)
T 2wsb_A          160 MAS  162 (254)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.97  E-value=2.4e-30  Score=189.27  Aligned_cols=149  Identities=25%  Similarity=0.380  Sum_probs=135.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      ++|+++||||+++||++++++|+++|++|++++|+++.++++.+.+     .++.++.+|++|+++++++++++. .+++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-----EGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999987776665443     267889999999999999999998 8899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++|
T Consensus        79 id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  153 (234)
T 2ehd_A           79 LSALVNNAGV---GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNAS  153 (234)
T ss_dssp             CCEEEECCCC---CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred             CCEEEECCCc---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHH
Confidence            9999999998   66678888999999999999999999999999999998878999999999999998998899864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.4e-30  Score=193.36  Aligned_cols=154  Identities=25%  Similarity=0.312  Sum_probs=136.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC-------CcEEEEEeecCCHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-------SQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. .+       .++.++.+|++|+++++++++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGG-PGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-------------CCEEEECCTTSHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-cCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4689999999999999999999999999999999998887777666543 33       568899999999999999999


Q ss_pred             HHH-hcCCc-cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCC
Q 031016           83 GVL-SLGFV-EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIA  159 (167)
Q Consensus        83 ~~~-~~~~i-~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~  159 (167)
                      ++. +++++ |++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|+||++||..+..+.+
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGI---TQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHhCCCCeEEEECCCc---CCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            998 88998 999999998   6667888899999999999999999999999999998876 68999999999999999


Q ss_pred             CccccccC
Q 031016          160 GFSELCKN  167 (167)
Q Consensus       160 ~~~~y~as  167 (167)
                      ++..|++|
T Consensus       161 ~~~~Y~~s  168 (264)
T 2pd6_A          161 GQTNYAAS  168 (264)
T ss_dssp             TBHHHHHH
T ss_pred             CChhhHHH
Confidence            99999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.97  E-value=1.2e-30  Score=199.48  Aligned_cols=157  Identities=21%  Similarity=0.303  Sum_probs=137.0

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe---------cChhhHHHHHHHHHhhcCCcEEEEEeecCCH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA---------RDLGRLSRFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~---------r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      |...+++++|+++||||++|||++++++|+++|++|++.+         |+.++.++..+.+.. .+..   ..+|+++.
T Consensus         1 M~~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~-~~~~---~~~D~~~~   76 (319)
T 1gz6_A            1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-RGGK---AVANYDSV   76 (319)
T ss_dssp             --CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-TTCE---EEEECCCG
T ss_pred             CCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh-hCCe---EEEeCCCH
Confidence            4445667899999999999999999999999999999964         466777777777765 4433   24799999


Q ss_pred             HHHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           75 RSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        75 ~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ++++++++++. +++++|+||||||+   ....++.+.+.++|+..+++|+.+++++++.++|.|++++.|+||++||..
T Consensus        77 ~~~~~~~~~~~~~~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~  153 (319)
T 1gz6_A           77 EAGEKLVKTALDTFGRIDVVVNNAGI---LRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASAS  153 (319)
T ss_dssp             GGHHHHHHHHHHHTSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence            99999999988 88999999999998   666678889999999999999999999999999999988889999999999


Q ss_pred             cccCCCCccccccC
Q 031016          154 SLNGIAGFSELCKN  167 (167)
Q Consensus       154 ~~~~~~~~~~y~as  167 (167)
                      +..+.+++..|++|
T Consensus       154 ~~~~~~~~~~Y~aS  167 (319)
T 1gz6_A          154 GIYGNFGQANYSAA  167 (319)
T ss_dssp             HHHCCTTCHHHHHH
T ss_pred             hccCCCCCHHHHHH
Confidence            99999999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=8.8e-31  Score=196.89  Aligned_cols=151  Identities=19%  Similarity=0.264  Sum_probs=132.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC------------hhhHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD------------LGRLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+.+.. .+.++.++.+|++|+++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-TGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-TTSCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh-cCCceEEEEccCCCHHH
Confidence            4679999999999999999999999999999999987            5666777777766 67789999999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++++++++. +++++|++|||||+   ....  .+.+.++|++.+++|+.+++++++.++|.|.  +.|+||++||..+.
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~---~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~  158 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGI---CPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGL  158 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC---CCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCc---Cccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchhc
Confidence            999999999 89999999999998   4443  3378899999999999999999999999993  35899999999887


Q ss_pred             cCC-----------CCccccccC
Q 031016          156 NGI-----------AGFSELCKN  167 (167)
Q Consensus       156 ~~~-----------~~~~~y~as  167 (167)
                      .+.           +++..|++|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~Y~as  181 (287)
T 3pxx_A          159 IAAAQPPGAGGPQGPGGAGYSYA  181 (287)
T ss_dssp             HHHHCCC-----CHHHHHHHHHH
T ss_pred             ccccccccccccCCCccchHHHH
Confidence            765           667778764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.97  E-value=2.2e-30  Score=194.11  Aligned_cols=155  Identities=21%  Similarity=0.217  Sum_probs=137.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH-HCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999998877777777665 56789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCC-CCCC-CCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC--CCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQP-TNFT-EISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG--IAGFSE  163 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~  163 (167)
                      +++|++|||||.   ... .++. +.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+  .+++..
T Consensus       110 g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  186 (279)
T 3ctm_A          110 GTIDVFVANAGV---TWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP  186 (279)
T ss_dssp             SCCSEEEECGGG---STTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred             CCCCEEEECCcc---cccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence            999999999998   444 6666 788999999999999999999999999999887899999999999888  778888


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       187 Y~~s  190 (279)
T 3ctm_A          187 YNTA  190 (279)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.97  E-value=3.6e-30  Score=191.76  Aligned_cols=153  Identities=12%  Similarity=0.116  Sum_probs=135.9

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC-cEEEEEeecCCHHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS-QVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+....+...+..+. .+. ++.++.+|++|+++++++++++.
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGT-LDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHT-SSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHh-cCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            4679999999999  5699999999999999999999987665555555554 444 79999999999999999999999


Q ss_pred             -hcCCccEEEEcCCCCCCCC----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           86 -SLGFVEVLVYNAYQPVSWQ----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                       +++++|++|||||.   ..    ..++.+.+.++|+..+++|+.+++.+++.++|.|++  .|+||++||..+..+.++
T Consensus        83 ~~~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~  157 (266)
T 3oig_A           83 EQVGVIHGIAHCIAF---ANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPN  157 (266)
T ss_dssp             HHHSCCCEEEECCCC---CCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTT
T ss_pred             HHhCCeeEEEEcccc---ccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCC
Confidence             89999999999998   44    467788999999999999999999999999999975  489999999999999999


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       158 ~~~Y~as  164 (266)
T 3oig_A          158 YNVMGVA  164 (266)
T ss_dssp             THHHHHH
T ss_pred             cchhHHH
Confidence            9999875

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=8.8e-30  Score=190.96  Aligned_cols=155  Identities=19%  Similarity=0.272  Sum_probs=138.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.++... ..++.++.+|++|+++++++++++. ++
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999988888887776521 2568899999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC--ceEEEecCCccc--cCCCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK--GTIIFTGCSASL--NGIAGFSE  163 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~iss~~~~--~~~~~~~~  163 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.  |+||++||..+.  .+.+++..
T Consensus       110 g~iD~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (279)
T 1xg5_A          110 SGVDICINNAGL---ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  186 (279)
T ss_dssp             CCCSEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             CCCCEEEECCCC---CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCch
Confidence            999999999998   66778888999999999999999999999999999998763  899999999987  56777788


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       187 Y~~s  190 (279)
T 1xg5_A          187 YSAT  190 (279)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            8764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.97  E-value=9.5e-31  Score=194.72  Aligned_cols=146  Identities=16%  Similarity=0.299  Sum_probs=130.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+..          ...++.++.+|++|+++++++++++. ++
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS----------ADPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC----------SSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc----------ccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            45789999999999999999999999999999999986532          23368999999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC--CCccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI--AGFSELC  165 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~~~y~  165 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.  ++...|+
T Consensus        95 g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  171 (260)
T 3un1_A           95 GRIDSLVNNAGV---FLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALAS  171 (260)
T ss_dssp             SCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHH
Confidence            999999999999   67788899999999999999999999999999999999888999999998876443  4557787


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       172 ~s  173 (260)
T 3un1_A          172 LT  173 (260)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.97  E-value=2e-30  Score=191.35  Aligned_cols=150  Identities=19%  Similarity=0.263  Sum_probs=123.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      ....+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+    ..++.++.+|+++++++++++++.   
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~---   82 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----KDNYTIEVCNLANKEECSNLISKT---   82 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CSSEEEEECCTTSHHHHHHHHHTC---
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----ccCccEEEcCCCCHHHHHHHHHhc---
Confidence            3457999999999999999999999999999999999988887777665    347889999999999998877754   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        83 ~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  159 (249)
T 3f9i_A           83 SNLDILVCNAGI---TSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCAS  159 (249)
T ss_dssp             SCCSEEEECCC----------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHH
Confidence            789999999998   66677888899999999999999999999999999998888999999999999999999999874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.97  E-value=8.1e-30  Score=191.33  Aligned_cols=154  Identities=19%  Similarity=0.238  Sum_probs=135.4

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .+.+.+|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+    +.++.++.+|++++++++++++++.+
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~  100 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSEDSVLAAIEAANQ  100 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHTT
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999998888777665    55799999999999999999998766


Q ss_pred             cCCccEEEEc-CCCCCCCCCCCC-----CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh------cCCceEEEecCCcc
Q 031016           87 LGFVEVLVYN-AYQPVSWQPTNF-----TEISFDSFQKSIAISSLGAFLCAQQVLSGMVE------RGKGTIIFTGCSAS  154 (167)
Q Consensus        87 ~~~i~~lv~~-ag~~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~g~iv~iss~~~  154 (167)
                      ++++|++||| +|.   ....++     .+.+.++|++.+++|+.+++.+++.++|.+.+      ++.|+||++||..+
T Consensus       101 ~~~id~lv~~aag~---~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A          101 LGRLRYAVVAHGGF---GVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             SSEEEEEEECCCCC---CCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             hCCCCeEEEccCcc---cccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence            7899999999 554   333333     46889999999999999999999999999987      45789999999999


Q ss_pred             ccCCCCccccccC
Q 031016          155 LNGIAGFSELCKN  167 (167)
Q Consensus       155 ~~~~~~~~~y~as  167 (167)
                      ..+.+++..|++|
T Consensus       178 ~~~~~~~~~Y~as  190 (281)
T 3ppi_A          178 YEGQIGQTAYAAA  190 (281)
T ss_dssp             TSCCTTCHHHHHH
T ss_pred             cCCCCCCcccHHH
Confidence            9999999999875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.97  E-value=5.7e-30  Score=190.12  Aligned_cols=157  Identities=19%  Similarity=0.203  Sum_probs=136.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+...+..+.+....+.++.++.+|++|+++++++++++. +
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999977666655666644356789999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCC-----
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAG-----  160 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~-----  160 (167)
                      ++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .++||++||..+..+.+.     
T Consensus        90 ~~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~  166 (265)
T 1h5q_A           90 LGPISGLIANAGV---SVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  166 (265)
T ss_dssp             SCSEEEEEECCCC---CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             cCCCCEEEECCCc---CCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccc
Confidence            8999999999998   6677888899999999999999999999999999998765 489999999988776542     


Q ss_pred             --ccccccC
Q 031016          161 --FSELCKN  167 (167)
Q Consensus       161 --~~~y~as  167 (167)
                        ...|++|
T Consensus       167 ~~~~~Y~~s  175 (265)
T 1h5q_A          167 LTQVFYNSS  175 (265)
T ss_dssp             CSCHHHHHH
T ss_pred             ccccccHHH
Confidence              6677653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.97  E-value=6.1e-30  Score=190.09  Aligned_cols=153  Identities=20%  Similarity=0.245  Sum_probs=136.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+    +.++.++.+|++|+++++++++++. +
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999988777766554    4578999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCC------CCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc------CCceEEEecCCcc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFT------EISFDSFQKSIAISSLGAFLCAQQVLSGMVER------GKGTIIFTGCSAS  154 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~  154 (167)
                      ++++|++|||||.   ....++.      +.+.++|++.+++|+.+++.+++.+.|.|.++      +.++||++||..+
T Consensus        84 ~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  160 (265)
T 2o23_A           84 FGRVDVAVNCAGI---AVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA  160 (265)
T ss_dssp             HSCCCEEEECCCC---CCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             CCCCCEEEECCcc---CCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh
Confidence            8999999999998   4444443      37899999999999999999999999999887      6789999999999


Q ss_pred             ccCCCCccccccC
Q 031016          155 LNGIAGFSELCKN  167 (167)
Q Consensus       155 ~~~~~~~~~y~as  167 (167)
                      ..+.+++..|++|
T Consensus       161 ~~~~~~~~~Y~~s  173 (265)
T 2o23_A          161 FEGQVGQAAYSAS  173 (265)
T ss_dssp             HHCCTTCHHHHHH
T ss_pred             cCCCCCCchhHHH
Confidence            9999999999864

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.97  E-value=4.1e-30  Score=188.93  Aligned_cols=152  Identities=19%  Similarity=0.273  Sum_probs=137.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEE-EEeecCCHHHHHHHHHHHH-hcC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFA-IRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+..+++.+.+.. .+.++.. +.+|++|+++++++++++. +++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR-RGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHH-TTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999998 8988888887777766 5566666 8999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++|
T Consensus        80 ~~d~li~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  155 (245)
T 2ph3_A           80 GLDTLVNNAGI---TRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVAS  155 (245)
T ss_dssp             CCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHH
Confidence            99999999998   66678888999999999999999999999999999998878999999999998898888889864

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=1.7e-29  Score=188.81  Aligned_cols=157  Identities=20%  Similarity=0.269  Sum_probs=137.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +.+.+|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+..  ..++.++.+|++|+++++++++++. +
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999998777766666532  2378999999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC-Cccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA-GFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~y~  165 (167)
                      ++++|++|||||... ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.|+||++||..+..+.+ ++..|+
T Consensus        90 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~  168 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLS-TTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT  168 (278)
T ss_dssp             HSCCCEEEECCCCCC-SSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred             cCCCCEEEECCcccC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchH
Confidence            899999999999821 123577889999999999999999999999999999988789999999999988887 788887


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       169 ~s  170 (278)
T 2bgk_A          169 AT  170 (278)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.97  E-value=7.4e-31  Score=194.62  Aligned_cols=144  Identities=25%  Similarity=0.343  Sum_probs=127.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++            ++.++.+|++|+++++++++++. ++
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999865321            26788999999999999999998 89


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        86 g~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (253)
T 2nm0_A           86 GPVEVLIANAGV---TKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAAS  162 (253)
T ss_dssp             CSCSEEEEECSC---CTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence            999999999998   66778888999999999999999999999999999998878999999999999888888888864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.97  E-value=5.3e-30  Score=189.26  Aligned_cols=144  Identities=29%  Similarity=0.392  Sum_probs=121.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++            +..+.+|++|+++++++++++. ++
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------SEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------------hcCeeccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999998654321            1247899999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+++..|++|
T Consensus        80 g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (247)
T 1uzm_A           80 GPVEVLVSNAGL---SADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAAS  156 (247)
T ss_dssp             SSCSEEEEECSC---CC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHH
Confidence            999999999998   66678889999999999999999999999999999998878999999999999999999999864

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.97  E-value=7.8e-30  Score=191.89  Aligned_cols=152  Identities=18%  Similarity=0.201  Sum_probs=132.7

Q ss_pred             CCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||+  +|||++++++|+++|++|++++|+++ .++..+.+....+ .+.++.+|++|+++++++++++. +
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999  99999999999999999999999875 3444445544233 37789999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           87 LGFVEVLVYNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      ++++|++|||||.   ...    .++.+.+.++|++.+++|+.+++++++.++|.|.++ .|+||++||..+..+.+++.
T Consensus        97 ~g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  172 (285)
T 2p91_A           97 WGSLDIIVHSIAY---APKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYN  172 (285)
T ss_dssp             TSCCCEEEECCCC---CCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTT
T ss_pred             cCCCCEEEECCCC---CCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCcc
Confidence            9999999999998   443    577789999999999999999999999999999764 58999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       173 ~Y~~s  177 (285)
T 2p91_A          173 VMGIA  177 (285)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.97  E-value=3e-30  Score=190.84  Aligned_cols=152  Identities=20%  Similarity=0.277  Sum_probs=137.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||++++++|+++|++|+++ .|+.+..++..+++.. .+.++.++.+|++++++++++++++. ++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-cCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            568999999999999999999999999999886 6777778888888877 67789999999999999999999887 54


Q ss_pred             ------CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           88 ------GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        88 ------~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                            +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+++
T Consensus        84 ~~~~~~~~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~  158 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGI---GPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDF  158 (255)
T ss_dssp             HHHHSSSCEEEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTB
T ss_pred             cccccCCcccEEEECCCC---CCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCc
Confidence                  359999999998   77788889999999999999999999999999999944  4799999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       159 ~~Y~as  164 (255)
T 3icc_A          159 IAYSMT  164 (255)
T ss_dssp             HHHHHH
T ss_pred             chhHHh
Confidence            999875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.8e-29  Score=191.08  Aligned_cols=156  Identities=21%  Similarity=0.290  Sum_probs=138.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh----cCCcEEEEEeecCCHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE----EKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...    .+.++.++.+|+++++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988888887777541    356799999999999999999999


Q ss_pred             HH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      +. +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.+.+++.|+||++||.. ..+.++..
T Consensus        94 ~~~~~g~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~  169 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGG---QFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAV  169 (303)
T ss_dssp             HHHHHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCH
T ss_pred             HHHHcCCCCEEEECCCC---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcch
Confidence            98 88999999999998   666788889999999999999999999999999976655568999999998 77888888


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       170 ~Y~~s  174 (303)
T 1yxm_A          170 HSGAA  174 (303)
T ss_dssp             HHHHH
T ss_pred             hhHHH
Confidence            88763

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=4.5e-30  Score=192.31  Aligned_cols=151  Identities=17%  Similarity=0.199  Sum_probs=132.3

Q ss_pred             CCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||+  +|||++++++|+++|++|++++|+++ .++..+.+....+ ++.++.+|++|+++++++++++. +
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999  99999999999999999999999876 4444455544233 47889999999999999999998 8


Q ss_pred             cCCccEEEEcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc
Q 031016           87 LGFVEVLVYNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  162 (167)
                      ++++|++|||||.   ...    .++.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+++.
T Consensus        82 ~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  156 (275)
T 2pd4_A           82 LGSLDFIVHSVAF---APKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYN  156 (275)
T ss_dssp             TSCEEEEEECCCC---CCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             cCCCCEEEECCcc---CccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCch
Confidence            9999999999998   443    67888999999999999999999999999999975  48999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      .|++|
T Consensus       157 ~Y~as  161 (275)
T 2pd4_A          157 VMGLA  161 (275)
T ss_dssp             HHHHH
T ss_pred             hhHHH
Confidence            99874

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=1.9e-29  Score=189.76  Aligned_cols=154  Identities=15%  Similarity=0.154  Sum_probs=136.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+|+++||||++|||++++++|+++|++|++++|+++.++++.+.+....+.++.++.+|++|+++++++++++. ++
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999888888877766333478999999999999999999998 88


Q ss_pred             CCccEEEEc-CCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYN-AYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++||| +|.   . ..++.+.+.++|+..+++|+.+++.+++.++|.|.++ .|+||++||..+..+.+++..|++
T Consensus       105 g~iD~li~naag~---~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  179 (286)
T 1xu9_A          105 GGLDMLILNHITN---T-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSA  179 (286)
T ss_dssp             TSCSEEEECCCCC---C-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCccC---C-CCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHH
Confidence            999999999 565   3 3355567899999999999999999999999998765 489999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       180 s  180 (286)
T 1xu9_A          180 S  180 (286)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.97  E-value=7.9e-31  Score=194.61  Aligned_cols=150  Identities=18%  Similarity=0.247  Sum_probs=124.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+..   .+.    .+.++.++.+|++|+++++++++.+.++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VAD----LGDRARFAAADVTDEAAVASALDLAETM   77 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHH----TCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHh----cCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            556899999999999999999999999999999999965432   222    4568999999999999999999877677


Q ss_pred             CCccEEEEcCCCCCCCCCCC----CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh--------cCCceEEEecCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTN----FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE--------RGKGTIIFTGCSASL  155 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~g~iv~iss~~~~  155 (167)
                      +++|++|||||.   ....+    ..+.+.++|++.+++|+.+++++++.++|.|.+        ++.|+||++||..+.
T Consensus        78 g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           78 GTLRIVVNCAGT---GNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             SCEEEEEECGGG---SHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             CCCCEEEECCCC---CCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            899999999998   43322    235889999999999999999999999999988        567899999999999


Q ss_pred             cCCCCccccccC
Q 031016          156 NGIAGFSELCKN  167 (167)
Q Consensus       156 ~~~~~~~~y~as  167 (167)
                      .+.+++..|++|
T Consensus       155 ~~~~~~~~Y~as  166 (257)
T 3tl3_A          155 DGQIGQAAYSAS  166 (257)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             CCCCCCccHHHH
Confidence            999999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=3e-30  Score=211.55  Aligned_cols=151  Identities=21%  Similarity=0.313  Sum_probs=132.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||+++|++|+++|++|++.++..  +++..+++.. .+.++..+.+|++  ++.+++++++. ++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~-~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKA-AGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHH-TTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHh-cCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            56799999999999999999999999999999988632  3455566655 5667888888884  45567788887 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||+||||||+   ....++.+.+.++|++++++|+.++|+++|+++|+|++++.|+||++||.++..+.+++..|++|
T Consensus       394 G~iDiLVnNAGi---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~as  470 (604)
T 2et6_A          394 GTIDILVNNAGI---LRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSS  470 (604)
T ss_dssp             SCCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHH
Confidence            999999999999   66788999999999999999999999999999999998888999999999999999999999875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.97  E-value=9.3e-30  Score=191.09  Aligned_cols=152  Identities=13%  Similarity=0.144  Sum_probs=132.2

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+.  .++..+.+.. ...++.++.+|++++++++++++++. 
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCA-EFNPAAVLPCDVISDQEIKDLFVELGK   99 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHG-GGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHH-hcCCceEEEeecCCHHHHHHHHHHHHH
Confidence            3578999999998  7799999999999999999999987  3344445544 33458899999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCC----CCCCC-CCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           86 SLGFVEVLVYNAYQPVSWQP----TNFTE-ISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      +++++|++|||||.   ...    .++.+ .+.++|++.+++|+.+++.+++.++|.|.++ .|+||++||.++..+.++
T Consensus       100 ~~g~id~li~nAg~---~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  175 (280)
T 3nrc_A          100 VWDGLDAIVHSIAF---APRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPS  175 (280)
T ss_dssp             HCSSCCEEEECCCC---CCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTT
T ss_pred             HcCCCCEEEECCcc---CCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCC
Confidence            89999999999998   443    44555 8999999999999999999999999999876 589999999999999999


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       176 ~~~Y~as  182 (280)
T 3nrc_A          176 YNTMGVA  182 (280)
T ss_dssp             THHHHHH
T ss_pred             chhhHHH
Confidence            9999874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.97  E-value=1.4e-29  Score=188.74  Aligned_cols=153  Identities=15%  Similarity=0.152  Sum_probs=132.5

Q ss_pred             CCCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ...++|+++||||+  +|||++++++|+++|++|++++|+....+... .+.. ...++.++.+|++|+++++++++++.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRIT-EFAA-EFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHH-HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHH-HHHH-HcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            34679999999999  99999999999999999999999865444433 3333 23358899999999999999999999


Q ss_pred             -hcCCccEEEEcCCCCCCCCC----CCCCC-CCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC
Q 031016           86 -SLGFVEVLVYNAYQPVSWQP----TNFTE-ISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA  159 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  159 (167)
                       +++++|++|||||+   ...    .++.+ .+.++|+..+++|+.+++.+++.++|.|.+  .|+||++||..+..+.+
T Consensus        88 ~~~g~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~  162 (271)
T 3ek2_A           88 THWDSLDGLVHSIGF---APREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIP  162 (271)
T ss_dssp             HHCSCEEEEEECCCC---CCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCT
T ss_pred             HHcCCCCEEEECCcc---CccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCC
Confidence             89999999999998   443    55555 899999999999999999999999999975  47999999999999999


Q ss_pred             CccccccC
Q 031016          160 GFSELCKN  167 (167)
Q Consensus       160 ~~~~y~as  167 (167)
                      ++..|++|
T Consensus       163 ~~~~Y~as  170 (271)
T 3ek2_A          163 NYNTMGLA  170 (271)
T ss_dssp             TTTHHHHH
T ss_pred             CccchhHH
Confidence            99999874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=6.8e-30  Score=188.45  Aligned_cols=146  Identities=14%  Similarity=0.151  Sum_probs=128.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +++|+++||||++|||++++++|+++|++|++++|++++++++. .    . .++.++.+|++|+++++++++   ++++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~----~-~~~~~~~~D~~~~~~~~~~~~---~~~~   74 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K----Y-PGIQTRVLDVTKKKQIDQFAN---EVER   74 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G----S-TTEEEEECCTTCHHHHHHHHH---HCSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h----c-cCceEEEeeCCCHHHHHHHHH---HhCC
Confidence            46899999999999999999999999999999999876655433 1    2 268889999999999985444   4589


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC-CccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA-GFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~y~as  167 (167)
                      +|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+ ++..|++|
T Consensus        75 id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~s  150 (246)
T 2ag5_A           75 LDVLFNVAGF---VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTT  150 (246)
T ss_dssp             CSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHH
T ss_pred             CCEEEECCcc---CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHH
Confidence            9999999998   667788899999999999999999999999999999988789999999999988888 88889864

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.97  E-value=6.7e-30  Score=190.05  Aligned_cols=152  Identities=19%  Similarity=0.218  Sum_probs=131.9

Q ss_pred             CCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+++ .++..+.+....+ .+.++.+|++|+++++++++++. 
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence            3568999999999  99999999999999999999999875 3334444443233 47889999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +++++|++|||||.   ...    .++.+.+.++|++.+++|+.+++++++.+.|.|.+  .|+||++||..+..+.+++
T Consensus        83 ~~g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  157 (261)
T 2wyu_A           83 AFGGLDYLVHAIAF---APREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKY  157 (261)
T ss_dssp             HHSSEEEEEECCCC---CCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTC
T ss_pred             HcCCCCEEEECCCC---CCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCc
Confidence            88999999999998   443    67888999999999999999999999999999964  4899999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       158 ~~Y~as  163 (261)
T 2wyu_A          158 NVMAIA  163 (261)
T ss_dssp             HHHHHH
T ss_pred             hHHHHH
Confidence            999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.97  E-value=1.6e-29  Score=188.61  Aligned_cols=154  Identities=23%  Similarity=0.310  Sum_probs=138.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +.+++|+++||||+++||++++++|+++|++|++++| +.+.++++.+.++. .+.++.++.+|++|+++++++++++. 
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            5568999999999999999999999999999999999 77777777777766 57789999999999999999999998 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~y  164 (167)
                      +++++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.+.|++ + ++||++||..+. .+.+++..|
T Consensus        96 ~~~~~d~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           96 HFGGLDFVMSNSGM---EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHSCEEEEECCCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHHH
T ss_pred             HcCCCCEEEECCCC---CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCchH
Confidence            88999999999998   66677888999999999999999999999999999973 3 899999999988 778888889


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       171 ~~s  173 (274)
T 1ja9_A          171 AGS  173 (274)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.97  E-value=2.6e-29  Score=184.59  Aligned_cols=143  Identities=24%  Similarity=0.328  Sum_probs=128.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|+++||||++|||++++++|+++|++|++++|+++.   ..+.+    +  +..+.+|+++ ++++++++++. +++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----G--AVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----T--CEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----C--cEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999998765   22222    2  6788999999 99999999988 88999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC--CCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI--AGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~~~y~as  167 (167)
                      |++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.  +++..|++|
T Consensus        72 d~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  147 (239)
T 2ekp_A           72 HVLVHAAAV---NVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTA  147 (239)
T ss_dssp             CEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHH
T ss_pred             CEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHH
Confidence            999999998   66778889999999999999999999999999999998888999999999998887  888889864

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.97  E-value=1.7e-29  Score=186.73  Aligned_cols=155  Identities=17%  Similarity=0.199  Sum_probs=138.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||+++||++++++|+++|++|++++|+ ++.++++.+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA-DGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999998 7888888877766 56789999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--C---ceEEEecCCcccc-CCCCc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--K---GTIIFTGCSASLN-GIAGF  161 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~---g~iv~iss~~~~~-~~~~~  161 (167)
                      +++|++|||||..  ....++.+.+.++|+..+++|+.+++.+++.++|.|.+++  .   ++||++||..+.. +.+++
T Consensus        84 g~id~vi~~Ag~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  161 (258)
T 3afn_B           84 GGIDVLINNAGGL--VGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA  161 (258)
T ss_dssp             SSCSEEEECCCCC--CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTC
T ss_pred             CCCCEEEECCCCc--CCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCc
Confidence            9999999999961  2345778889999999999999999999999999997654  3   8999999999887 88888


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       162 ~~Y~~s  167 (258)
T 3afn_B          162 GLYGAA  167 (258)
T ss_dssp             HHHHHH
T ss_pred             hHHHHH
Confidence            889864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.97  E-value=8.8e-30  Score=189.72  Aligned_cols=151  Identities=14%  Similarity=0.142  Sum_probs=130.6

Q ss_pred             CCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||+  +|||++++++|+++|++|++++|++ ..++..+.+....+ ...++.+|++|+++++++++++. +
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHH
Confidence            568999999999  9999999999999999999999987 44444455544233 34788999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCC----CCCCC-CCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQP----TNFTE-ISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++++|++|||||.   ...    .++.+ .+.++|++.+++|+.+++++++.+.|.|.+  .|+||++||..+..+.+++
T Consensus        85 ~g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  159 (265)
T 1qsg_A           85 WPKFDGFVHSIGF---APGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNY  159 (265)
T ss_dssp             CSSEEEEEECCCC---CCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTT
T ss_pred             cCCCCEEEECCCC---CCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCc
Confidence            9999999999998   442    56677 899999999999999999999999999964  4799999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       160 ~~Y~~s  165 (265)
T 1qsg_A          160 NVMGLA  165 (265)
T ss_dssp             THHHHH
T ss_pred             hHHHHH
Confidence            999874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.96  E-value=1.2e-29  Score=188.02  Aligned_cols=145  Identities=20%  Similarity=0.243  Sum_probs=128.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~   91 (167)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+ +.. .+.++..+     |+++++++++++. +++++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~-~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAE-TYPQLKPM-----SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHH-HCTTSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHh-cCCcEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence            789999999999999999999999999999999888777665 654 45555444     6778888888888 889999


Q ss_pred             EEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           92 VLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        92 ~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|||||.   . ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        75 ~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  148 (254)
T 1zmt_A           75 VLVSNDIF---APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSA  148 (254)
T ss_dssp             EEEEECCC---CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHH
T ss_pred             EEEECCCc---CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHH
Confidence            99999998   5 5678889999999999999999999999999999998878999999999999999999999874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.96  E-value=7.3e-30  Score=195.69  Aligned_cols=153  Identities=24%  Similarity=0.297  Sum_probs=131.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-----cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-----EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ++|+++||||++|||++++++|+++|++|++++|+...+++..+.++..     .+.++.++.+|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            3789999999999999999999999999888877654433333333221     24679999999999999999998763


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                       .+++|++|||||+   ....++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+++..|+
T Consensus        81 -~g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 -EGRVDVLVCNAGL---GLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             -TSCCSEEEECCCC---CCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             -cCCCCEEEECCCc---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence             5789999999998   666788899999999999999999999999999999988789999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       157 aS  158 (327)
T 1jtv_A          157 AS  158 (327)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=3.5e-29  Score=186.59  Aligned_cols=147  Identities=21%  Similarity=0.302  Sum_probs=130.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..++..+.+.... +.++.++.+|++|+++++++++++. ++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999888777777765421 3468999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCCcccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++|++|||||.   ..        .++|++.+++|+.+++.+++.++|.|.+++   .|+||++||..+..+.+++..|
T Consensus        85 g~id~lv~~Ag~---~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (267)
T 2gdz_A           85 GRLDILVNNAGV---NN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY  153 (267)
T ss_dssp             SCCCEEEECCCC---CC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred             CCCCEEEECCCC---CC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchH
Confidence            999999999998   32        367999999999999999999999998753   5899999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       154 ~~s  156 (267)
T 2gdz_A          154 CAS  156 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.96  E-value=2.2e-29  Score=183.98  Aligned_cols=145  Identities=17%  Similarity=0.175  Sum_probs=130.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+.+    +.++.++.+|++++++++++++++.  ..+|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~--~~~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQEVEQLFEQLD--SIPST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SSCCCEEECCTTCHHHHHHHHHSCS--SCCSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hhccCeEeecCCCHHHHHHHHHHHh--hcCCE
Confidence            78999999999999999999999999999999988877766543    5678899999999999999988774  23499


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++ ++||++||..+..+.+++..|++|
T Consensus        76 lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~as  146 (230)
T 3guy_A           76 VVHSAGS---GYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAV  146 (230)
T ss_dssp             EEECCCC---CCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             EEEeCCc---CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHH
Confidence            9999998   7778899999999999999999999999999999998865 499999999999999999999874

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.96  E-value=1e-29  Score=208.86  Aligned_cols=153  Identities=22%  Similarity=0.288  Sum_probs=127.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec---------ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR---------DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   78 (167)
                      +.+++|+++||||++|||+++|++|+++|++|++++|         +.+.+++..++++. .+..+   .+|+++.++++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~-~~~~~---~~D~~d~~~~~   90 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK-AGGEA---VADYNSVIDGA   90 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH-TTCCE---EECCCCGGGHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH-hCCeE---EEEeCCHHHHH
Confidence            4578999999999999999999999999999999987         66677788888876 44443   37999999999


Q ss_pred             HHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           79 EAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        79 ~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ++++++. ++++||+||||||+   ....++.+.+.++|+.++++|+.+++++++.++|.|++++.|+||++||.++..+
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi---~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~  167 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGI---LRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG  167 (613)
T ss_dssp             HHHC----------CEECCCCC---CCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHCCCCcEEEECCCC---CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence            9999998 88999999999999   6778899999999999999999999999999999999988899999999999999


Q ss_pred             CCCccccccC
Q 031016          158 IAGFSELCKN  167 (167)
Q Consensus       158 ~~~~~~y~as  167 (167)
                      .+++..|++|
T Consensus       168 ~~~~~~Y~as  177 (613)
T 3oml_A          168 NFGQVNYTAA  177 (613)
T ss_dssp             CTTCHHHHHH
T ss_pred             CCCChHHHHH
Confidence            9999999875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=1.2e-28  Score=181.10  Aligned_cols=148  Identities=22%  Similarity=0.353  Sum_probs=130.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|++++++++.+.+   .  ...++.+|++|+++++++++   +++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~---~~~   75 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---P--GIEPVCVDLGDWEATERALG---SVG   75 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHT---TCC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CCCEEEEeCCCHHHHHHHHH---HcC
Confidence            467899999999999999999999999999999999987776655443   1  34567999999999988776   358


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.+.|.|.+++ .|+||++||..+..+.+++..|++|
T Consensus        76 ~id~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           76 PVDLLVNNAAV---ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCcc---CCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            89999999998   6667888899999999999999999999999999998876 6999999999999999999999874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.96  E-value=2.5e-29  Score=185.27  Aligned_cols=143  Identities=18%  Similarity=0.177  Sum_probs=126.3

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-e--cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-A--RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +|+++||||++|||++++++|+++|++|+++ +  |+++.++++.+.+ .  +       .|+.|+++++++++++. ++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~--~-------~~~~~~~~v~~~~~~~~~~~   70 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P--G-------TIALAEQKPERLVDATLQHG   70 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T--T-------EEECCCCCGGGHHHHHGGGS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C--C-------CcccCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999999999999 6  9988777666554 1  1       24447888888999988 88


Q ss_pred             CCccEEEEcCCCCCCCCC---CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           88 GFVEVLVYNAYQPVSWQP---TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      +++|++|||||.   ...   .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|
T Consensus        71 g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  147 (244)
T 1zmo_A           71 EAIDTIVSNDYI---PRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLY  147 (244)
T ss_dssp             SCEEEEEECCCC---CTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTH
T ss_pred             CCCCEEEECCCc---CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHH
Confidence            999999999998   566   78889999999999999999999999999999998878999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       148 ~as  150 (244)
T 1zmo_A          148 GPA  150 (244)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.96  E-value=7.1e-29  Score=185.26  Aligned_cols=148  Identities=16%  Similarity=0.188  Sum_probs=128.8

Q ss_pred             CCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016           10 SCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus        10 ~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +++|+++|||+  ++|||++++++|+++|++|++++|+.+. ++++.+.    .+.++.++.+|++|+++++++++++. 
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR----LPAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT----SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh----cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence            56899999999  9999999999999999999999998765 3433322    45578889999999999999999998 


Q ss_pred             hcC---CccEEEEcCCCCCCCC-----CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           86 SLG---FVEVLVYNAYQPVSWQ-----PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        86 ~~~---~i~~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      +++   ++|++|||||.   ..     ..++.+.+.++|++.+++|+.+++.+++.++|.|.++  |+||++||..+ .+
T Consensus        81 ~~g~~~~iD~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~  154 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGF---MPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RA  154 (269)
T ss_dssp             HHCTTCCEEEEEECCCC---CCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SC
T ss_pred             HhCCCCCceEEEECCcc---CccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cc
Confidence            888   99999999998   44     4678889999999999999999999999999999763  79999999876 67


Q ss_pred             CCCccccccC
Q 031016          158 IAGFSELCKN  167 (167)
Q Consensus       158 ~~~~~~y~as  167 (167)
                      .+++..|++|
T Consensus       155 ~~~~~~Y~as  164 (269)
T 2h7i_A          155 MPAYNWMTVA  164 (269)
T ss_dssp             CTTTHHHHHH
T ss_pred             cCchHHHHHH
Confidence            7888888864

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=1.4e-28  Score=180.78  Aligned_cols=150  Identities=13%  Similarity=0.162  Sum_probs=132.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++|+++||||+++||++++++|+++|  ++|++++|+.+..+++.+.    .+.++.++.+|++++++++++++++. ++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc----cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999  9999999998776554321    25679999999999999999999998 77


Q ss_pred             C--CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc------C-----CceEEEecCCc
Q 031016           88 G--FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER------G-----KGTIIFTGCSA  153 (167)
Q Consensus        88 ~--~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~g~iv~iss~~  153 (167)
                      +  ++|++|||||.   .. ..++.+.+.++|+..+++|+.+++.+++.++|.|.++      +     .++||++||..
T Consensus        78 g~~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  154 (250)
T 1yo6_A           78 GSDGLSLLINNAGV---LLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             GGGCCCEEEECCCC---CCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             CCCCCcEEEECCcc---cCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCc
Confidence            7  99999999998   55 6788889999999999999999999999999999876      5     68999999999


Q ss_pred             cccCC-------CCccccccC
Q 031016          154 SLNGI-------AGFSELCKN  167 (167)
Q Consensus       154 ~~~~~-------~~~~~y~as  167 (167)
                      +..+.       +++..|++|
T Consensus       155 ~~~~~~~~~~~~~~~~~Y~~s  175 (250)
T 1yo6_A          155 GSITDNTSGSAQFPVLAYRMS  175 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHH
T ss_pred             cccCCcccccccCCccHHHHH
Confidence            88776       577788764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.96  E-value=1e-28  Score=182.75  Aligned_cols=146  Identities=16%  Similarity=0.152  Sum_probs=124.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCH-HHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDS-RSVREAFEGVL   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~   85 (167)
                      ++++|+++||||++|||++++++|+++|++ |++++|+++.  +..+.+.... +.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            457899999999999999999999999996 8999997642  1222332212 45789999999998 99999999998


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCCc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~  161 (167)
                       +++++|++|||||.   .        +.++|++.+++|+.+++.+++.++|.|.+++   .|+||++||..+..+.+++
T Consensus        80 ~~~g~id~lv~~Ag~---~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  148 (254)
T 1sby_A           80 DQLKTVDILINGAGI---L--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV  148 (254)
T ss_dssp             HHHSCCCEEEECCCC---C--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS
T ss_pred             HhcCCCCEEEECCcc---C--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCc
Confidence             88999999999997   2        3478999999999999999999999997764   5899999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       149 ~~Y~~s  154 (254)
T 1sby_A          149 PVYSAS  154 (254)
T ss_dssp             HHHHHH
T ss_pred             hHHHHH
Confidence            999874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=2.4e-28  Score=179.43  Aligned_cols=148  Identities=22%  Similarity=0.324  Sum_probs=129.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++++|+++||||+++||++++++|+++|++|++++|+++.++++.+.+     ..+.++.+|++|+++++++++   +++
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~---~~~   75 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALG---GIG   75 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHT---TCC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCCcEEecCCCHHHHHHHHH---HcC
Confidence            356899999999999999999999999999999999987766655432     235567999999999988776   357


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .|+||++||..+..+.++...|++|
T Consensus        76 ~id~vi~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           76 PVDLLVNNAAL---VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             CCSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCcc---cCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            89999999998   6667888899999999999999999999999999998876 6899999999999998999999864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.96  E-value=1.1e-28  Score=181.74  Aligned_cols=141  Identities=10%  Similarity=0.136  Sum_probs=125.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHH-cCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAH-EGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .++|+++||||++|||++++++|++ .|++|++.+|+++.           ...++.++.+|++|+++++++++.+. .+
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~-~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------SAENLKFIKADLTKQQDITNVLDIIK-NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------CCTTEEEEECCTTCHHHHHHHHHHTT-TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------ccccceEEecCcCCHHHHHHHHHHHH-hC
Confidence            3579999999999999999999999 78899998887641           23457899999999999999996554 67


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++++++.+.|.|.++  |+||++||..+..+.+++..|++|
T Consensus        70 ~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~as  143 (244)
T 4e4y_A           70 SFDGIFLNAGI---LIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLS  143 (244)
T ss_dssp             CEEEEEECCCC---CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHH
T ss_pred             CCCEEEECCcc---CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHH
Confidence            99999999999   677889999999999999999999999999999999765  799999999999999999999875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.96  E-value=2e-28  Score=194.93  Aligned_cols=152  Identities=19%  Similarity=0.215  Sum_probs=133.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+... +++.+.... .  .+.++.+|++|+++++++++++. ++
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~-~--~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK-V--GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH-H--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH-c--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            3478999999999999999999999999999999986432 223333322 2  24688999999999999999998 88


Q ss_pred             CC-ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GF-VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~-i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++ ||++|||||+   ....++.+.+.++|++++++|+.+++++.+.+.|.|.+++.|+||++||.++..+.+++..|++
T Consensus       286 g~~id~lV~nAGv---~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Yaa  362 (454)
T 3u0b_A          286 GGKVDILVNNAGI---TRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYAT  362 (454)
T ss_dssp             TTCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             CCCceEEEECCcc---cCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHH
Confidence            75 9999999999   7778899999999999999999999999999999998877899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       363 s  363 (454)
T 3u0b_A          363 T  363 (454)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.96  E-value=1.1e-28  Score=181.55  Aligned_cols=141  Identities=16%  Similarity=0.156  Sum_probs=126.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc--
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL--   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~--   87 (167)
                      ++|+++||||++|||++++++|+++|++|++++|+++...           ....++.+|++|+++++++++++. ++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999999875421           245778899999999999999998 77  


Q ss_pred             CCccEEEEcCCCCCCCCCCCC-CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNF-TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   ....++ .+.+.++|++.+++|+.+++.+++.+.|.|++  .|+||++||..+..+.+++..|++
T Consensus        75 g~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  149 (241)
T 1dhr_A           75 QKVDAILCVAGG---WAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGM  149 (241)
T ss_dssp             CCEEEEEECCCC---CCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             CCCCEEEEcccc---cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHH
Confidence            799999999998   566677 78889999999999999999999999999965  379999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       150 s  150 (241)
T 1dhr_A          150 A  150 (241)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=7.7e-29  Score=181.69  Aligned_cols=141  Identities=16%  Similarity=0.163  Sum_probs=126.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc--
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL--   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~--   87 (167)
                      ++|+++||||++|||++++++|+++|++|++++|+++...           ....++.+|++|+++++++++++. ++  
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999999876421           235678899999999999999998 77  


Q ss_pred             CCccEEEEcCCCCCCCCCCCC-CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNF-TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   ....++ .+.+.++|++.+++|+.+++.+++.+.|.|++  .|+||++||..+..+.+++..|++
T Consensus        71 g~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~  145 (236)
T 1ooe_A           71 SQVDGVFCVAGG---WAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGM  145 (236)
T ss_dssp             CCEEEEEECCCC---CCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             CCCCEEEECCcc---cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHH
Confidence            799999999998   566677 78889999999999999999999999999965  379999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       146 s  146 (236)
T 1ooe_A          146 A  146 (236)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=1.5e-28  Score=198.71  Aligned_cols=153  Identities=13%  Similarity=0.184  Sum_probs=134.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEE-ecCh-------------hhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAIL-ARDL-------------GRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      .+++++||||++|||++++++|+++|++ |+++ +|+.             +.++++.++++. .+.++.++.||++|++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-LGATATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH-HTCEEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-cCCEEEEEECCCCCHH
Confidence            5899999999999999999999999997 6777 8873             445677777776 7889999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCcc
Q 031016           76 SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSAS  154 (167)
Q Consensus        76 ~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~  154 (167)
                      +++++++++.++++||++|||||+   ...+++.+.+.++|++++++|+.+++++.+.+.+.+++++ .++||++||.++
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv---~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPT---VDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCC---CCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcC---CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            999999987667899999999999   7778999999999999999999999999999999998776 689999999999


Q ss_pred             ccCCCCccccccC
Q 031016          155 LNGIAGFSELCKN  167 (167)
Q Consensus       155 ~~~~~~~~~y~as  167 (167)
                      ..+.++++.|++|
T Consensus       406 ~~g~~g~~~Yaaa  418 (525)
T 3qp9_A          406 IWGGAGQGAYAAG  418 (525)
T ss_dssp             TTCCTTCHHHHHH
T ss_pred             cCCCCCCHHHHHH
Confidence            9999999999874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.96  E-value=4e-28  Score=180.55  Aligned_cols=155  Identities=13%  Similarity=0.142  Sum_probs=132.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcC---CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEG---YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      ..+++|+++||||+++||++++++|+++|   ++|++++|+.+..+++ +.+.. .+.++.++.+|++++++++++++++
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAK-NHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHH-HCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhc-cCCceEEEEecCCChHHHHHHHHHH
Confidence            34578999999999999999999999999   9999999987765544 33433 3568999999999999999999999


Q ss_pred             H-hcC--CccEEEEcCCCCCCCC-CCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc------C-----CceEEEe
Q 031016           85 L-SLG--FVEVLVYNAYQPVSWQ-PTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER------G-----KGTIIFT  149 (167)
Q Consensus        85 ~-~~~--~i~~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~g~iv~i  149 (167)
                      . .++  ++|++|||||.   .. ..++.+.+.++|+..+++|+.+++.+++.++|.|.++      +     .++||++
T Consensus        95 ~~~~g~~~id~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGI---APKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHGGGCCSEEEECCCC---CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHhcCCCCccEEEECCCc---CCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            8 777  89999999998   55 6788889999999999999999999999999999876      3     5899999


Q ss_pred             cCCccccCCC---CccccccC
Q 031016          150 GCSASLNGIA---GFSELCKN  167 (167)
Q Consensus       150 ss~~~~~~~~---~~~~y~as  167 (167)
                      ||..+..+.+   +...|++|
T Consensus       172 sS~~~~~~~~~~~~~~~Y~~s  192 (267)
T 1sny_A          172 SSILGSIQGNTDGGMYAYRTS  192 (267)
T ss_dssp             CCGGGCSTTCCSCCCHHHHHH
T ss_pred             ecccccccCCCCCCchHHHHH
Confidence            9999887763   66778764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.96  E-value=5.5e-28  Score=187.61  Aligned_cols=156  Identities=10%  Similarity=0.072  Sum_probs=128.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHH-cCCeEEEEecChhhH------------HHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAH-EGYTVAILARDLGRL------------SRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~-~g~~v~~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      ..+|+++||||++|||+++++.|++ +|++|++++|+.+..            ....+.++. .+.++..+.+|++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cCCceEEEECCCCCHHH
Confidence            3589999999999999999999999 999999998765432            123334444 67789999999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCC----------CCCCCC---------------------CCCCHHHHHHHhhhhh
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVS----------WQPTNF---------------------TEISFDSFQKSIAISS  124 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~----------~~~~~~---------------------~~~~~~~~~~~~~~n~  124 (167)
                      ++++++++. ++|++|+||||||....          ....++                     .+.+.|+|++++++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            999999999 99999999999997200          022344                     7789999999999999


Q ss_pred             HHHH-HHHHHHHH-hhHhcCCceEEEecCCccccCCCCc--cccccC
Q 031016          125 LGAF-LCAQQVLS-GMVERGKGTIIFTGCSASLNGIAGF--SELCKN  167 (167)
Q Consensus       125 ~~~~-~l~~~~~~-~~~~~~~g~iv~iss~~~~~~~~~~--~~y~as  167 (167)
                      .++| ++++++.+ .|.+ ++|+||++||..+..+.|.+  ++|++|
T Consensus       204 ~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~Aa  249 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAA  249 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHH
T ss_pred             hhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHH
Confidence            9998 78888765 4544 35899999999999999987  999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.96  E-value=1.9e-28  Score=178.28  Aligned_cols=130  Identities=21%  Similarity=0.280  Sum_probs=118.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+                     +|++|+++++++++++   +
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~---g   58 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETI---G   58 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHH---C
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHh---C
Confidence            357899999999999999999999999999999998754                     7999999999998875   8


Q ss_pred             CccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   . ...++.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.+++..|++|
T Consensus        59 ~id~lv~nAg~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~as  133 (223)
T 3uce_A           59 AFDHLIVTAGS---YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAI  133 (223)
T ss_dssp             SEEEEEECCCC---CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCC---CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHH
Confidence            99999999998   4 6678899999999999999999999999999999976  3799999999999999999999874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.95  E-value=6.6e-29  Score=182.98  Aligned_cols=147  Identities=20%  Similarity=0.217  Sum_probs=107.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|++ |++|++++|+++.++++.+      ..++.++.+|+++++. .+.+.+.. ++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~-~~~~~~~~~~~   73 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVL-EEGGVDKLKNL   73 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHH-TSSSCGGGTTC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHH-HHHHHHHHHhc
Confidence            45789999999999999999999988 8999999999877665543      2358889999998876 44444455 77


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.+++..|++|
T Consensus        74 ~~id~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as  149 (245)
T 3e9n_A           74 DHVDTLVHAAAV---ARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAAS  149 (245)
T ss_dssp             SCCSEEEECC-------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHH
T ss_pred             CCCCEEEECCCc---CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHH
Confidence            899999999999   6778888899999999999999999999999999998765 899999999999999999999875

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.95  E-value=1e-27  Score=177.42  Aligned_cols=140  Identities=18%  Similarity=0.213  Sum_probs=124.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ..+|+++||||++|||++++++|+++|++|++++|+.+...             -..+.+|++|+++++++++++. +++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999875421             1356889999999999999999 899


Q ss_pred             CccEEEEcCCCCCCCCCCC-CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTN-FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....+ +.+.+.++|++.+++|+.+++.+++.+.|.|++  .|+||++||..+..+.+++..|++|
T Consensus        87 ~iD~li~~Ag~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s  161 (251)
T 3orf_A           87 KVDTFVCAAGG---WSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGAT  161 (251)
T ss_dssp             CEEEEEECCCC---CCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCEEEECCcc---CCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHH
Confidence            99999999998   44444 678889999999999999999999999999976  4799999999999999999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=2e-27  Score=175.63  Aligned_cols=141  Identities=23%  Similarity=0.294  Sum_probs=122.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++|+++||||++|||++++++|+++|++|++++|+++..+       . .+ ++.++ +|+  +++++++++++   .
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~-~~-~~~~~-~D~--~~~~~~~~~~~---~   80 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK-------R-SG-HRYVV-CDL--RKDLDLLFEKV---K   80 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------H-TC-SEEEE-CCT--TTCHHHHHHHS---C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-------h-hC-CeEEE-eeH--HHHHHHHHHHh---c
Confidence            467999999999999999999999999999999999873221       1 22 56677 999  55677777765   4


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++|
T Consensus        81 ~iD~lv~~Ag~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (249)
T 1o5i_A           81 EVDILVLNAGG---PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA  156 (249)
T ss_dssp             CCSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCC---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHH
Confidence            89999999998   66778889999999999999999999999999999998888999999999999999999999864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=3.2e-28  Score=183.57  Aligned_cols=144  Identities=25%  Similarity=0.308  Sum_probs=124.3

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.++..+.    .+.++.++.+|++|+++++++++++   
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~v~~~~~~~---   84 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART----MAGQVEVRELDLQDLSSVRRFADGV---   84 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----SSSEEEEEECCTTCHHHHHHHHHTC---
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----hcCCeeEEEcCCCCHHHHHHHHHhc---
Confidence            456899999999999999999999999999999999998877766544    3568999999999999999988876   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC----------
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG----------  157 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------  157 (167)
                      +++|++|||||+   ..  +..+.+.++|+..+++|+.+++++++.++|.|.+    +||++||.++..+          
T Consensus        85 ~~iD~lv~nAg~---~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~  155 (291)
T 3rd5_A           85 SGADVLINNAGI---MA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWR  155 (291)
T ss_dssp             CCEEEEEECCCC---CS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCS
T ss_pred             CCCCEEEECCcC---CC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccccc
Confidence            799999999998   32  3356788999999999999999999999999975    8999999998765          


Q ss_pred             ---CCCccccccC
Q 031016          158 ---IAGFSELCKN  167 (167)
Q Consensus       158 ---~~~~~~y~as  167 (167)
                         .+++..|++|
T Consensus       156 ~~~~~~~~~Y~~s  168 (291)
T 3rd5_A          156 SRRYSPWLAYSQS  168 (291)
T ss_dssp             SSCCCHHHHHHHH
T ss_pred             ccCCCCcchHHHH
Confidence               3455678764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.95  E-value=1.1e-28  Score=189.27  Aligned_cols=154  Identities=15%  Similarity=0.155  Sum_probs=126.5

Q ss_pred             CCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChh---------hHHHHHHHHHh--hcCCcEEEEEeecCCH--H
Q 031016           11 CRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLG---------RLSRFADEIAR--EEKSQVFAIRIDCSDS--R   75 (167)
Q Consensus        11 ~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~---------~~~~~~~~l~~--~~~~~~~~~~~D~~~~--~   75 (167)
                      ++|+++|||+++  |||+++|++|+++|++|++.++++.         +.+...+.+..  .....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            379999999985  9999999999999999998876642         11111111111  0123478899999988  7


Q ss_pred             ------------------HHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHH
Q 031016           76 ------------------SVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLS  136 (167)
Q Consensus        76 ------------------~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  136 (167)
                                        +++++++++. +++++|+||||||+.. ....++.+.+.++|++++++|+.+++++++.++|
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAK-EVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCT-TTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccc-cCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                              9999999998 8999999999999711 2467888999999999999999999999999999


Q ss_pred             hhHhcCCceEEEecCCccccCCCCcc-ccccC
Q 031016          137 GMVERGKGTIIFTGCSASLNGIAGFS-ELCKN  167 (167)
Q Consensus       137 ~~~~~~~g~iv~iss~~~~~~~~~~~-~y~as  167 (167)
                      .|+++  |+||++||.++..+.+++. .|++|
T Consensus       160 ~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~as  189 (329)
T 3lt0_A          160 IMKPQ--SSIISLTYHASQKVVPGYGGGMSSA  189 (329)
T ss_dssp             GEEEE--EEEEEEECGGGTSCCTTCTTTHHHH
T ss_pred             HHhhC--CeEEEEeCccccCCCCcchHHHHHH
Confidence            99875  8999999999999999986 99875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.95  E-value=9.1e-28  Score=187.76  Aligned_cols=156  Identities=13%  Similarity=0.068  Sum_probs=127.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHH-cCCeEEEEecChhhHH------------HHHHHHHhhcCCcEEEEEeecCCHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAH-EGYTVAILARDLGRLS------------RFADEIAREEKSQVFAIRIDCSDSRSV   77 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~-~g~~v~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~D~~~~~~~   77 (167)
                      .+|++|||||++|||+++++.|++ +|++|++++|+.+..+            .+.+.++. .+.++..+.+|+++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-AGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-cCCcEEEEEecCCCHHHH
Confidence            489999999999999999999999 9999999988754322            23345555 677899999999999999


Q ss_pred             HHHHHHHH-hc-CCccEEEEcCCCCCC----------CCCCCC---------------------CCCCHHHHHHHhhhhh
Q 031016           78 REAFEGVL-SL-GFVEVLVYNAYQPVS----------WQPTNF---------------------TEISFDSFQKSIAISS  124 (167)
Q Consensus        78 ~~~~~~~~-~~-~~i~~lv~~ag~~~~----------~~~~~~---------------------~~~~~~~~~~~~~~n~  124 (167)
                      +++++.+. ++ |+||+||||||....          ....++                     .+.+.++|++.+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999 99 999999999986100          012333                     3689999999999999


Q ss_pred             HHHH-HHHHHHHHhhHhcCCceEEEecCCccccCCCCc--cccccC
Q 031016          125 LGAF-LCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF--SELCKN  167 (167)
Q Consensus       125 ~~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y~as  167 (167)
                      .++| .+++.+.+.+..+++|+||++||..+..+.|.+  ++|++|
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~AS  264 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKA  264 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHH
Confidence            9998 888887764333345899999999999988876  889875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.95  E-value=3.1e-27  Score=175.82  Aligned_cols=139  Identities=18%  Similarity=0.163  Sum_probs=122.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHH-cCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAH-EGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++|+++||||+++||++++++|++ +|++|++++|+.+..++..+.+.. .+.++.++.+|++++++++++++++. +++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999 999999999999888888888876 56788999999999999999999998 889


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCC-HHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEIS-FDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      ++|++|||||.   ..... ...+ .++|+..+++|+.+++.+++.+.|.|.+  .|+||++||..+..
T Consensus        82 ~id~li~~Ag~---~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~  144 (276)
T 1wma_A           82 GLDVLVNNAGI---AFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVR  144 (276)
T ss_dssp             SEEEEEECCCC---CCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHH
T ss_pred             CCCEEEECCcc---cccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhc
Confidence            99999999998   43333 2334 5899999999999999999999999875  37999999987763

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.94  E-value=5.9e-27  Score=178.77  Aligned_cols=154  Identities=20%  Similarity=0.206  Sum_probs=106.1

Q ss_pred             CCCCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecCh-----------hhHH-----------HHHHHHHhhcCCc
Q 031016            8 GSSCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDL-----------GRLS-----------RFADEIAREEKSQ   63 (167)
Q Consensus         8 ~~~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~-----------~~~~-----------~~~~~l~~~~~~~   63 (167)
                      +.+++|+++|||+  ++|||++++++|+++|++|++++|++           +.++           ++.+++.. .+..
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   83 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAE-KPVD   83 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhh-cccc
Confidence            3467999999999  89999999999999999999998753           1111           12223322 1110


Q ss_pred             ---EEEEEee------------cCC--------HHHHHHHHHHHH-hcCCccEEEEcCCCCCCC--CCCCCCCCCHHHHH
Q 031016           64 ---VFAIRID------------CSD--------SRSVREAFEGVL-SLGFVEVLVYNAYQPVSW--QPTNFTEISFDSFQ  117 (167)
Q Consensus        64 ---~~~~~~D------------~~~--------~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~--~~~~~~~~~~~~~~  117 (167)
                         ..++.+|            +++        +++++++++++. +++++|++|||||.   .  ...++.+.+.++|+
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~---~~~~~~~~~~~~~~~~~  160 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLAN---GPEVTKPLLQTSRKGYL  160 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEEC---CSSSSSCGGGCCHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCcc---CCCCCCccccCCHHHHH
Confidence               2333333            333        457899999998 88999999999997   4  35678899999999


Q ss_pred             HHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc-cccccC
Q 031016          118 KSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF-SELCKN  167 (167)
Q Consensus       118 ~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~as  167 (167)
                      +.+++|+.+++++++.++|.|.+.  |+||++||..+..+.+++ ..|++|
T Consensus       161 ~~~~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~as  209 (319)
T 2ptg_A          161 AAVSSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVIPGYGGGMSSA  209 (319)
T ss_dssp             HHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC---------------
T ss_pred             HHHhHhhHHHHHHHHHHHHHHhcC--ceEEEEeccccccccCccchhhHHH
Confidence            999999999999999999999763  899999999999998887 689876

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=7.7e-27  Score=187.22  Aligned_cols=147  Identities=12%  Similarity=0.148  Sum_probs=131.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh---hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL---GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +|+++|||+++|||++++++|+++|+ +|++++|+.   +..+++.++++. .+.++.++.||++|+++++++++++. +
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ-LGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            59999999999999999999999999 788888863   346677778877 78899999999999999999999987 5


Q ss_pred             cCCccEEEEcCCCCCCC-CCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSW-QPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                       +++|++|||||+   . ...++.+.+.++|++++++|+.+++++.+.+.+.    ..++||++||.++..+.++++.|+
T Consensus       318 -g~ld~vVh~AGv---~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~Ya  389 (496)
T 3mje_A          318 -APLTAVFHSAGV---AHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYA  389 (496)
T ss_dssp             -SCEEEEEECCCC---CCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHH
T ss_pred             -CCCeEEEECCcc---cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHH
Confidence             799999999998   5 6778999999999999999999999999987655    346999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       390 Aa  391 (496)
T 3mje_A          390 AA  391 (496)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=4.3e-27  Score=197.94  Aligned_cols=146  Identities=12%  Similarity=0.184  Sum_probs=134.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHH-HcCC-eEEEEecC---hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFA-HEGY-TVAILARD---LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~-~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .+|+++|||+++|||++++++|+ ++|+ +|++.+|+   .+..+++.++++. .+.++.++.||++|+++++++++++.
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA-YGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            58999999999999999999999 7999 48889998   4557778888877 78899999999999999999999987


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                       ++ +||++|||||+   ..+.++.+.+.++|++.+++|+.+++++.+.+.|.|      +||++||.++..|.++++.|
T Consensus       608 ~~~-~id~lVnnAGv---~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~Y  677 (795)
T 3slk_A          608 DEH-PLTAVVHAAGV---LDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNY  677 (795)
T ss_dssp             TTS-CEEEEEECCCC---CCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHH
T ss_pred             HhC-CCEEEEECCCc---CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHH
Confidence             65 99999999999   778899999999999999999999999999998776      89999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       678 aAa  680 (795)
T 3slk_A          678 AAA  680 (795)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.94  E-value=5e-26  Score=178.74  Aligned_cols=157  Identities=12%  Similarity=0.106  Sum_probs=128.8

Q ss_pred             CCCcEEEEEcCCCchhHH--HHHHHHHcCCeEEEEecChhh------------HHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016           10 SCRGIAAIVGVGPNLGRS--IARKFAHEGYTVAILARDLGR------------LSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~--~a~~l~~~g~~v~~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      ..+|+++||||++|||++  +++.|+++|++|++++|+...            .+.+.+.++. .+.++..+.+|+++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK-KGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH-cCCcEEEEEeeCCCHH
Confidence            468999999999999999  999999999999999886433            2344444444 6778999999999999


Q ss_pred             HHHHHHHHHH-hcCCccEEEEcCCCCCC----------CCCCCC---------------------CCCCHHHHHHHhhhh
Q 031016           76 SVREAFEGVL-SLGFVEVLVYNAYQPVS----------WQPTNF---------------------TEISFDSFQKSIAIS  123 (167)
Q Consensus        76 ~~~~~~~~~~-~~~~i~~lv~~ag~~~~----------~~~~~~---------------------~~~~~~~~~~~~~~n  123 (167)
                      +++++++++. ++|+||+||||||....          ....++                     .+.+.++|+..+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            9999999999 89999999999997200          012233                     467999999999999


Q ss_pred             hHHHH-HHHHHHHHhhHhcCCceEEEecCCccccCCCCc--cccccC
Q 031016          124 SLGAF-LCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF--SELCKN  167 (167)
Q Consensus       124 ~~~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~y~as  167 (167)
                      ..+++ .+++.+.+.+...+.|+||++||..+..+.|.+  ++|++|
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~AS  263 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIA  263 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHH
Confidence            99998 778887765544446899999999999999988  999875

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.94  E-value=1.1e-26  Score=177.06  Aligned_cols=152  Identities=20%  Similarity=0.177  Sum_probs=120.6

Q ss_pred             CCCCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecChh-----------hHHHHHHHHHhhcCCc---EEEEEee-
Q 031016            8 GSSCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDLG-----------RLSRFADEIAREEKSQ---VFAIRID-   70 (167)
Q Consensus         8 ~~~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~~-----------~~~~~~~~l~~~~~~~---~~~~~~D-   70 (167)
                      +++++|+++||||  ++|||++++++|+++|++|++++|++.           .+++. +.+.  .+..   ..++.+| 
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~d~   81 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLP--DGSLIEFAGVYPLDA   81 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCT--TSCBCCCSCEEECCT
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhh--ccccccccccccccc
Confidence            4467999999999  899999999999999999999987641           11111 1111  1110   2333333 


Q ss_pred             -----------cCC--------HHHHHHHHHHHH-hcCCccEEEEcCCCCCCC--CCCCCCCCCHHHHHHHhhhhhHHHH
Q 031016           71 -----------CSD--------SRSVREAFEGVL-SLGFVEVLVYNAYQPVSW--QPTNFTEISFDSFQKSIAISSLGAF  128 (167)
Q Consensus        71 -----------~~~--------~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~  128 (167)
                                 ++|        +++++++++++. +++++|++|||||.   .  ...++.+.+.++|++.+++|+.+++
T Consensus        82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~---~~~~~~~~~~~~~~~~~~~~~~N~~g~~  158 (315)
T 2o2s_A           82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLAN---GPEVTKPLLETSRKGYLAASSNSAYSFV  158 (315)
T ss_dssp             TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCC---CTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCcc---CCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence                       343        668999999998 88999999999997   4  2567888999999999999999999


Q ss_pred             HHHHHHHHhhHhcCCceEEEecCCccccCCCCc-cccccC
Q 031016          129 LCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF-SELCKN  167 (167)
Q Consensus       129 ~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~as  167 (167)
                      ++++.++|.|.+.  |+||++||..+..+.+++ ..|++|
T Consensus       159 ~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~as  196 (315)
T 2o2s_A          159 SLLQHFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSA  196 (315)
T ss_dssp             HHHHHHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHH
T ss_pred             HHHHHHHHHHhcC--CEEEEEecccccccCCCccHHHHHH
Confidence            9999999999763  899999999999998887 589874

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.94  E-value=7.8e-26  Score=199.99  Aligned_cols=155  Identities=14%  Similarity=0.194  Sum_probs=135.1

Q ss_pred             CCCCCcEEEEEcCCCc-hhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPN-LGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      +.+++|+++||||++| ||++++++|+++|++|+++ .|+.+.+++..+.+...   .+.++.++.+|++|+++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4568999999999998 9999999999999999998 57777777666666332   25689999999999999999999


Q ss_pred             HHH-h-----cC-CccEEEEcCCCCCCCCCC-CCCCCC--HHHHHHHhhhhhHHHHHHHHHH--HHhhHhcCCceEEEec
Q 031016           83 GVL-S-----LG-FVEVLVYNAYQPVSWQPT-NFTEIS--FDSFQKSIAISSLGAFLCAQQV--LSGMVERGKGTIIFTG  150 (167)
Q Consensus        83 ~~~-~-----~~-~i~~lv~~ag~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~g~iv~is  150 (167)
                      ++. +     +| ++|+||||||+   ...+ ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.|+||++|
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi---~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAI---PEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  827 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCC---CCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred             HHHHhccccccCCCCeEEEECCCc---CCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence            998 7     66 99999999998   6666 888888  8999999999999999999988  7888877678999999


Q ss_pred             CCccccCCCCccccccC
Q 031016          151 CSASLNGIAGFSELCKN  167 (167)
Q Consensus       151 s~~~~~~~~~~~~y~as  167 (167)
                      |..+..+  ++..|++|
T Consensus       828 S~ag~~g--g~~aYaAS  842 (1887)
T 2uv8_A          828 PNHGTFG--GDGMYSES  842 (1887)
T ss_dssp             SCTTCSS--CBTTHHHH
T ss_pred             ChHhccC--CCchHHHH
Confidence            9999887  67788874

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.7e-26  Score=199.63  Aligned_cols=155  Identities=14%  Similarity=0.185  Sum_probs=134.5

Q ss_pred             CCCCCcEEEEEcCCCc-hhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhc---CCcEEEEEeecCCHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPN-LGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREE---KSQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      +++++|+++||||++| ||+++|++|+++|++|+++ +|+.+.+++..+.+....   +.++.++.+|++|+++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4568999999999998 9999999999999999998 577666666666653312   5679999999999999999999


Q ss_pred             HHH-h-----cC-CccEEEEcCCCCCCCCCC-CCCCCC--HHHHHHHhhhhhHHHHHHHHHH--HHhhHhcCCceEEEec
Q 031016           83 GVL-S-----LG-FVEVLVYNAYQPVSWQPT-NFTEIS--FDSFQKSIAISSLGAFLCAQQV--LSGMVERGKGTIIFTG  150 (167)
Q Consensus        83 ~~~-~-----~~-~i~~lv~~ag~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~g~iv~is  150 (167)
                      ++. +     +| ++|+||||||+   ...+ ++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.|+||++|
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI---~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAI---PEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCC---CCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHhccccccCCCCeEEEECCCc---CCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            998 7     77 99999999998   6666 788888  8999999999999999999999  8899887778999999


Q ss_pred             CCccccCCCCccccccC
Q 031016          151 CSASLNGIAGFSELCKN  167 (167)
Q Consensus       151 s~~~~~~~~~~~~y~as  167 (167)
                      |.++..+  ++.+|++|
T Consensus       629 SiAG~~G--g~saYaAS  643 (1688)
T 2pff_A          629 PNHGTFG--GDGMYSES  643 (1688)
T ss_dssp             SCTTTSS--CBTTHHHH
T ss_pred             ChHhccC--CchHHHHH
Confidence            9998877  67788874

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.94  E-value=2.1e-26  Score=174.04  Aligned_cols=153  Identities=19%  Similarity=0.159  Sum_probs=119.9

Q ss_pred             CCCCCcEEEEEcCC--CchhHHHHHHHHHcCCeEEEEecChhh-----------HHHHHHHHHhhcC--CcEEEEEee--
Q 031016            8 GSSCRGIAAIVGVG--PNLGRSIARKFAHEGYTVAILARDLGR-----------LSRFADEIAREEK--SQVFAIRID--   70 (167)
Q Consensus         8 ~~~~~~~~lItGa~--~~iG~~~a~~l~~~g~~v~~~~r~~~~-----------~~~~~~~l~~~~~--~~~~~~~~D--   70 (167)
                      +++++|+++||||+  +|||++++++|+++|++|++++|++..           ++++ +.+.. ..  .....+.+|  
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECTT
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-cccccccccccccee
Confidence            34679999999999  999999999999999999999875321           1111 11110 00  012333443  


Q ss_pred             ------c----CC--------HHHHHHHHHHHH-hcCCccEEEEcCCCCCCCC--CCCCCCCCHHHHHHHhhhhhHHHHH
Q 031016           71 ------C----SD--------SRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQ--PTNFTEISFDSFQKSIAISSLGAFL  129 (167)
Q Consensus        71 ------~----~~--------~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~  129 (167)
                            +    +|        +++++++++++. +++++|++|||||.   ..  ..++.+.+.++|++.+++|+.++++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~---~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  158 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLAN---GPEVSKPLLETSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCC---CTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCcc---CccCCCCcccCCHHHHHHHHHHhhhHHHH
Confidence                  2    22        668899999998 88999999999997   33  5678889999999999999999999


Q ss_pred             HHHHHHHhhHhcCCceEEEecCCccccCCCCc-cccccC
Q 031016          130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAGF-SELCKN  167 (167)
Q Consensus       130 l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~y~as  167 (167)
                      +++.++|.|++  .|+||++||..+..+.+++ ..|++|
T Consensus       159 l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~as  195 (297)
T 1d7o_A          159 LLSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSA  195 (297)
T ss_dssp             HHHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHH
T ss_pred             HHHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHH
Confidence            99999999976  3899999999999998887 689874

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=8.3e-26  Score=165.48  Aligned_cols=140  Identities=21%  Similarity=0.252  Sum_probs=121.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +|+++||||+++||++++++|+++|++|++++|+++ .            .++.++.+|++|+++++++++++.+++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence            689999999999999999999999999999999764 1            235788999999999999998876568999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCC----HHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---C---ceEEEecCCccccCCCCc
Q 031016           92 VLVYNAYQPVSWQPTNFTEIS----FDSFQKSIAISSLGAFLCAQQVLSGMVERG---K---GTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~---g~iv~iss~~~~~~~~~~  161 (167)
                      ++|||||.   ....++.+.+    .++|++.+++|+.+++.+++.+.+.|.+++   .   |+||++||..+..+.+++
T Consensus        69 ~li~~ag~---~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  145 (242)
T 1uay_A           69 AVVSAAGV---GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ  145 (242)
T ss_dssp             EEEECCCC---CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC
T ss_pred             EEEEcccc---cCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC
Confidence            99999998   5555555544    449999999999999999999999998764   3   499999999999998899


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       146 ~~Y~~s  151 (242)
T 1uay_A          146 AAYAAS  151 (242)
T ss_dssp             HHHHHH
T ss_pred             chhhHH
Confidence            999864

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.93  E-value=1.8e-25  Score=197.48  Aligned_cols=155  Identities=14%  Similarity=0.118  Sum_probs=133.1

Q ss_pred             CCCCCcEEEEEcCCCc-hhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPN-LGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~-iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      +++++|++|||||++| ||+++|++|+++|++|++++ |+.+.+.+..+.+...   .+.++.++.||++|+++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4567999999999998 99999999999999999985 6666666555555321   26689999999999999999999


Q ss_pred             HHH-h---cC-CccEEEEcCCCCCCCCCC-CCCCCC--HHHHHHHhhhhhHHHHHHHHH--HHHhhHhcCCceEEEecCC
Q 031016           83 GVL-S---LG-FVEVLVYNAYQPVSWQPT-NFTEIS--FDSFQKSIAISSLGAFLCAQQ--VLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        83 ~~~-~---~~-~i~~lv~~ag~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~g~iv~iss~  152 (167)
                      ++. +   +| +||+||||||+   ...+ ++.+.+  .++|++++++|+.+++.+++.  +++.|.+++.|+||++||.
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi---~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~  804 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAI---PENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPN  804 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCC---CCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSC
T ss_pred             HHHHhhcccCCCCcEEEeCccc---ccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcch
Confidence            998 7   88 99999999998   6666 888888  899999999999999999977  7788877767899999999


Q ss_pred             ccccCCCCccccccC
Q 031016          153 ASLNGIAGFSELCKN  167 (167)
Q Consensus       153 ~~~~~~~~~~~y~as  167 (167)
                      ++..+  ++..|++|
T Consensus       805 ag~~g--g~~aYaAS  817 (1878)
T 2uv9_A          805 HGTFG--NDGLYSES  817 (1878)
T ss_dssp             SSSSS--CCSSHHHH
T ss_pred             hhccC--CchHHHHH
Confidence            99887  57788864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=4.3e-25  Score=177.10  Aligned_cols=149  Identities=17%  Similarity=0.170  Sum_probs=131.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChh---hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLG---RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .+++++||||+||||++++++|+++|++ |++++|+..   ..+++.++++. .+.++.++.||++|+++++++++++.+
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh-cCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            5799999999999999999999999995 999999864   45667777766 678899999999999999999988764


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      .+++|++|||||.   ...+++.+.+.+++++++++|+.+++++.+.+.+    .+.++||++||.++..+.+++..|++
T Consensus       304 ~g~ld~VIh~AG~---~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaa  376 (486)
T 2fr1_A          304 DVPLSAVFHAAAT---LDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAP  376 (486)
T ss_dssp             TSCEEEEEECCCC---CCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHH
T ss_pred             cCCCcEEEECCcc---CCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHH
Confidence            5899999999998   6777888999999999999999999999998754    34579999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       377 a  377 (486)
T 2fr1_A          377 G  377 (486)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.92  E-value=6.9e-25  Score=156.82  Aligned_cols=127  Identities=16%  Similarity=0.215  Sum_probs=114.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|+||++++++|+ +|++|++++|+++                  .+.+|++++++++++++++   +++|++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~---~~~d~v   62 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQV---GKVDAI   62 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHH---CCEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHh---CCCCEE
Confidence            69999999999999999999 9999999999754                  3679999999999988875   789999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |||||.   ....++.+.+.++|++.+++|+.+++.+++.+.+.|.+.  ++||++||..+..+.+++..|++|
T Consensus        63 i~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~s  131 (202)
T 3d7l_A           63 VSATGS---ATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMA  131 (202)
T ss_dssp             EECCCC---CCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             EECCCC---CCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCCCCccHHHHHH
Confidence            999998   666788889999999999999999999999999998653  799999999999998998888764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=5.3e-25  Score=157.77  Aligned_cols=137  Identities=20%  Similarity=0.253  Sum_probs=117.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |+++||||+|+||++++++|+++  +|++++|+++.++++.+.+.    .  .++.+|++|++++++++++   ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~--~~~~~D~~~~~~~~~~~~~---~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A--RALPADLADELEAKALLEE---AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C--EECCCCTTSHHHHHHHHHH---HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C--cEEEeeCCCHHHHHHHHHh---cCCCCE
Confidence            57999999999999999999999  99999999887776665542    2  7889999999999998887   488999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +|||||.   ....++.+.+.++|++.+++|+.+++.+++.+    .+++.++||++||..+..+.++...|++|
T Consensus        70 vi~~ag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  137 (207)
T 2yut_A           70 LVHAVGK---AGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAA  137 (207)
T ss_dssp             EEECCCC---CCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHH
T ss_pred             EEECCCc---CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHH
Confidence            9999998   66778888899999999999999999999998    23345899999999999998999899864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=9.7e-25  Score=199.67  Aligned_cols=151  Identities=17%  Similarity=0.080  Sum_probs=119.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhH---HHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRL---SRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .+|+++||||++|||+++|++|+++|++ |++++|+..+.   .+..+.++. .+.++.++.||++|+++++++++++.+
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR-QGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH-TTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh-CCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            6899999999999999999999999997 77888875443   445555655 577899999999999999999998776


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++||++|||||+   ....++.+.+.++|++++++|+.+++++.+.+.+.|.+.  |+||++||.++..+.++++.|++
T Consensus      1962 ~g~id~lVnnAgv---~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~a 2036 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMV---LRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGF 2036 (2512)
T ss_dssp             HSCEEEEEECCCC-------------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHH
T ss_pred             cCCCcEEEECCCc---CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHH
Confidence            6899999999998   677889999999999999999999999999999988664  79999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus      2037 a 2037 (2512)
T 2vz8_A         2037 A 2037 (2512)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.91  E-value=9e-24  Score=170.25  Aligned_cols=146  Identities=18%  Similarity=0.181  Sum_probs=128.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChh---hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLG---RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .+++++|||++||||++++++|+++|+ +|++++|+..   ..+++.++++. .+.++.++.||++|++++++++++   
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG-HGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT-TTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh-cCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            579999999999999999999999999 6888999863   45677777766 677899999999999999988876   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                       +++|++|||||+   ....++.+.+.++++.++++|+.+++++.+.+.+..   +.++||++||.++..+.+++..|++
T Consensus       334 -~~ld~VVh~AGv---~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~~~~~V~~SS~a~~~g~~g~~~Yaa  406 (511)
T 2z5l_A          334 -YPPNAVFHTAGI---LDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---GLDAFVLFSSVTGTWGNAGQGAYAA  406 (511)
T ss_dssp             -SCCSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---TCCCEEEEEEGGGTTCCTTBHHHHH
T ss_pred             -CCCcEEEECCcc---cCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCEEEEEeCHHhcCCCCCCHHHHH
Confidence             689999999999   677788899999999999999999999998865331   3479999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       407 a  407 (511)
T 2z5l_A          407 A  407 (511)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.90  E-value=1.7e-24  Score=160.12  Aligned_cols=117  Identities=12%  Similarity=0.137  Sum_probs=99.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |+++||||++|||++++++|+++|++|++++|+++..+.           .   +.+|++++++++++++++  .+++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~---~~~Dl~~~~~v~~~~~~~--~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D---LSTAEGRKQAIADVLAKC--SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C---TTSHHHHHHHHHHHHTTC--TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c---cccCCCCHHHHHHHHHHh--CCCCCE
Confidence            689999999999999999999999999999998654211           1   568999999988877643  279999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|||||.   ....       +.|++.+++|+.+++.+++.++|.|.+++.|+||++||..+.
T Consensus        66 lv~~Ag~---~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           66 LVLCAGL---GPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             EEECCCC---CTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             EEECCCC---CCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence            9999998   3311       238999999999999999999999998877999999999987

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.87  E-value=2.8e-22  Score=149.30  Aligned_cols=114  Identities=12%  Similarity=0.134  Sum_probs=97.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ++|+++||||+|+||++++++|+++|++|++++|++.+.          .+.++.++.+|++|+++++++++      ++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~------~~   65 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----------AGPNEECVQCDLADANAVNAMVA------GC   65 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC----------CCTTEEEEECCTTCHHHHHHHHT------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc----------cCCCCEEEEcCCCCHHHHHHHHc------CC
Confidence            468999999999999999999999999999999986542          24578999999999999988776      58


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      |++|||||.   .        +.+.|+..+++|+.+++++++.+.    +++.++||++||..+.
T Consensus        66 D~vi~~Ag~---~--------~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~  115 (267)
T 3rft_A           66 DGIVHLGGI---S--------VEKPFEQILQGNIIGLYNLYEAAR----AHGQPRIVFASSNHTI  115 (267)
T ss_dssp             SEEEECCSC---C--------SCCCHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEEEEGGGG
T ss_pred             CEEEECCCC---c--------CcCCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcchHHh
Confidence            999999997   2        234688999999999999999984    3355799999998876

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.86  E-value=4.6e-22  Score=146.34  Aligned_cols=120  Identities=15%  Similarity=0.173  Sum_probs=101.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |+++||||+|+||++++++|+++|++|++++|+++..+           .   .+.+|++++++++++++++  .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~---~~~~D~~~~~~~~~~~~~~--~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------A---DLSTPGGRETAVAAVLDRC--GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C---CTTSHHHHHHHHHHHHHHH--TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------c---cccCCcccHHHHHHHHHHc--CCCccE
Confidence            68999999999999999999999999999999765321           0   1568999999998888754  368999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      +|||||.   ...       .+.|+..+++|+.+++.+++.+.+.|.+++.++||++||..+..+.
T Consensus        66 vi~~Ag~---~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~  121 (255)
T 2dkn_A           66 LVCCAGV---GVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG  121 (255)
T ss_dssp             EEECCCC---CTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTT
T ss_pred             EEECCCC---CCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccc
Confidence            9999998   321       1348899999999999999999999988777899999999887654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.85  E-value=1.1e-20  Score=173.77  Aligned_cols=157  Identities=12%  Similarity=0.110  Sum_probs=119.7

Q ss_pred             CCCCCcEEEEEcCCCc-hhHHHHHHHHHcCCeEEEEecChhh-----HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPN-LGRSIARKFAHEGYTVAILARDLGR-----LSRFADEIAREEKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~-iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      ..+++|+++||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++.. .+.++..+.+|+++++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-FDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHH
Confidence            3468999999999999 9999999999999999999998766     5566666654 5678999999999999999999


Q ss_pred             HHHH-----hcCCccEEEEcCCCCCC--CCCCCCCCCCHHHHHHH----hhhhhHHHHHHHHHHHHhhHhcCCc----eE
Q 031016           82 EGVL-----SLGFVEVLVYNAYQPVS--WQPTNFTEISFDSFQKS----IAISSLGAFLCAQQVLSGMVERGKG----TI  146 (167)
Q Consensus        82 ~~~~-----~~~~i~~lv~~ag~~~~--~~~~~~~~~~~~~~~~~----~~~n~~~~~~l~~~~~~~~~~~~~g----~i  146 (167)
                      +++.     ++|++|+||||||+...  ....+..+.+.++|+..    +++|+.+++.+++.+.+.|.+++.+    .+
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            9885     35899999999996110  11123334455556555    9999999999999999999887532    34


Q ss_pred             EEecCCccccCCCCccccccC
Q 031016          147 IFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus       147 v~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|+..+.  .++..+|++|
T Consensus      2291 ~~~ss~~g~--~g~~~aYsAS 2309 (3089)
T 3zen_D         2291 LPGSPNRGM--FGGDGAYGEA 2309 (3089)
T ss_dssp             EEECSSTTS--CSSCSSHHHH
T ss_pred             EECCccccc--CCCchHHHHH
Confidence            444444333  2355678874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.82  E-value=9.9e-20  Score=139.26  Aligned_cols=130  Identities=15%  Similarity=0.120  Sum_probs=103.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++||||+|+||++++++|+++|++|++++|+.+...+..+.+....+.++.++.+|++|++++++++++    +++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA----HPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH----SCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc----cCC
Confidence            4678999999999999999999999999999999876655555555443466789999999999999988875    479


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      |++||+||.   ....    ...+.....+++|+.+++.+++.+    ++.+.++||++||....
T Consensus        80 d~vih~A~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~  133 (341)
T 3enk_A           80 TAAIHFAAL---KAVG----ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVY  133 (341)
T ss_dssp             CEEEECCCC---CCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGB
T ss_pred             cEEEECccc---cccC----ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEe
Confidence            999999997   3222    123455678899999999887764    44455799999996654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.82  E-value=7.9e-20  Score=133.45  Aligned_cols=127  Identities=13%  Similarity=0.153  Sum_probs=98.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcE-EEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQV-FAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++++++||||+|+||++++++|+++|++|++++|++++.+++.+       ..+ .++.+|++         +.+. .
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~---------~~~~~~   81 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLE---------EDFSHA   81 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTT---------SCCGGG
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccH---------HHHHHH
Confidence            4578999999999999999999999999999999999887665432       257 88999998         2233 3


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC---CCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI---AGFSE  163 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~~~~~  163 (167)
                      ++++|++|||||.   ..        .++++..+++|+.+++.+++++.    +.+.++||++||..+..+.   +....
T Consensus        82 ~~~~D~vi~~ag~---~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~~  146 (236)
T 3e8x_A           82 FASIDAVVFAAGS---GP--------HTGADKTILIDLWGAIKTIQEAE----KRGIKRFIMVSSVGTVDPDQGPMNMRH  146 (236)
T ss_dssp             GTTCSEEEECCCC---CT--------TSCHHHHHHTTTHHHHHHHHHHH----HHTCCEEEEECCTTCSCGGGSCGGGHH
T ss_pred             HcCCCEEEECCCC---CC--------CCCccccchhhHHHHHHHHHHHH----HcCCCEEEEEecCCCCCCCCChhhhhh
Confidence            4689999999997   32        14688999999999999999874    3345799999997766554   34556


Q ss_pred             ccc
Q 031016          164 LCK  166 (167)
Q Consensus       164 y~a  166 (167)
                      |++
T Consensus       147 Y~~  149 (236)
T 3e8x_A          147 YLV  149 (236)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.80  E-value=2.1e-19  Score=137.27  Aligned_cols=126  Identities=12%  Similarity=0.080  Sum_probs=99.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .++.+++++||||+|+||++++++|+++|++|++++|+.....+..+   . . .++.++.+|++|+++++++++++   
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~-l-~~v~~~~~Dl~d~~~~~~~~~~~---   87 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---P-V-AGLSVIEGSVTDAGLLERAFDSF---   87 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC---S-C-TTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh---c-c-CCceEEEeeCCCHHHHHHHHhhc---
Confidence            45678999999999999999999999999999999996543221111   1 1 46888999999999999888765   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                       ++|++||+||.   ....     +.++++  +++|+.+++.+++++..    .+.++||++||.....
T Consensus        88 -~~D~vih~A~~---~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~  141 (330)
T 2pzm_A           88 -KPTHVVHSAAA---YKDP-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYG  141 (330)
T ss_dssp             -CCSEEEECCCC---CSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGC
T ss_pred             -CCCEEEECCcc---CCCc-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhC
Confidence             69999999997   3221     446666  99999999999999873    3457999999987643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.79  E-value=4.1e-19  Score=135.74  Aligned_cols=128  Identities=17%  Similarity=0.163  Sum_probs=99.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH-HHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR-FADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ++++++||||+|+||.+++++|+++|++|++++|+++.... ..+.+.  ...++.++.+|++|+++++++++.+    +
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----~   75 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG--IENDVKIIHMDLLEFSNIIRTIEKV----Q   75 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT--CTTTEEECCCCTTCHHHHHHHHHHH----C
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc--ccCceeEEECCCCCHHHHHHHHHhc----C
Confidence            46889999999999999999999999999999997654321 111111  1246889999999999999888865    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|++||+||.   ..    .+.+.++++..+++|+.+++.+++++.+. .  ..++||++||...
T Consensus        76 ~d~vih~A~~---~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~--~~~~iv~~SS~~v  130 (345)
T 2z1m_A           76 PDEVYNLAAQ---SF----VGVSFEQPILTAEVDAIGVLRILEALRTV-K--PDTKFYQASTSEM  130 (345)
T ss_dssp             CSEEEECCCC---CC----HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-C--TTCEEEEEEEGGG
T ss_pred             CCEEEECCCC---cc----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-C--CCceEEEEechhh
Confidence            8999999997   22    12234678899999999999999998743 1  1369999999753

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.79  E-value=1.3e-18  Score=125.74  Aligned_cols=112  Identities=12%  Similarity=0.143  Sum_probs=92.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHH-HcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFA-HEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~-~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .|+++||||+|+||++++++|+ ++|++|++++|+++ +++++.    . .+.++.++.+|++|+++++++++      +
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~-~~~~~~~~~~D~~d~~~~~~~~~------~   73 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I-DHERVTVIEGSFQNPGXLEQAVT------N   73 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H-TSTTEEEEECCTTCHHHHHHHHT------T
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c-CCCceEEEECCCCCHHHHHHHHc------C
Confidence            4789999999999999999999 89999999999977 554443    1 35678999999999999988776      5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +|++|||+|.   .                   |+.     .+.+++.+++.+.++||++||..+..+.++.
T Consensus        74 ~d~vv~~ag~---~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~  118 (221)
T 3r6d_A           74 AEVVFVGAME---S-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVA  118 (221)
T ss_dssp             CSEEEESCCC---C-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH
T ss_pred             CCEEEEcCCC---C-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcc
Confidence            7999999987   2                   222     7888888888777899999998887765543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.78  E-value=1.3e-18  Score=134.49  Aligned_cols=132  Identities=17%  Similarity=0.168  Sum_probs=96.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH-HHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS-RFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++++||||+|+||++++++|+++|++|++++|+.+... +..+.+...   .+.++.++.+|++|+++++++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            367999999999999999999999999999999765321 111111110   1356889999999999999888865   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                       ++|++||+||.   ...    ..+.++++..+++|+.++..+++.+.+...+ +.++||++||....
T Consensus        78 -~~d~vih~A~~---~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~  136 (372)
T 1db3_A           78 -QPDEVYNLGAM---SHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELY  136 (372)
T ss_dssp             -CCSEEEECCCC---CTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGG
T ss_pred             -CCCEEEECCcc---cCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhh
Confidence             68999999997   322    2344567889999999999999999876543 23699999997643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.78  E-value=1.4e-18  Score=133.72  Aligned_cols=134  Identities=16%  Similarity=0.111  Sum_probs=107.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHc-CC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHE-GY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++|+++||||+|+||++++++|+++ |+ +|++++|++.+..++.+.+.   ..++.++.+|++|+++++++++     
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~-----   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALE-----   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHh-----
Confidence            46899999999999999999999999 98 99999999887776665552   3578999999999988877665     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                       ++|++||+||.   .. .+.   ..+.....+++|+.++.++++++.+.    +.++||++||..+..|   ...|++
T Consensus        91 -~~D~Vih~Aa~---~~-~~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y~~  154 (344)
T 2gn4_A           91 -GVDICIHAAAL---KH-VPI---AEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLYGA  154 (344)
T ss_dssp             -TCSEEEECCCC---CC-HHH---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHHHH
T ss_pred             -cCCEEEECCCC---CC-CCc---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHHHH
Confidence             68999999997   22 111   23446788999999999999998865    3469999999876544   345554

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.78  E-value=4.9e-19  Score=136.34  Aligned_cols=129  Identities=11%  Similarity=0.034  Sum_probs=103.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.+++++||||+|+||++++++|+++|++|++++|++....++.+.+.  ...++.++.+|++++++++++++.+    +
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----~   80 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF----Q   80 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH----C
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhc----C
Confidence            357899999999999999999999999999999998765444433332  2456889999999999999888865    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|++||+||.   .    ....+.++++..+++|+.++..+++++.+.   .+.++||++||...
T Consensus        81 ~d~vih~A~~---~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~v  135 (357)
T 1rkx_A           81 PEIVFHMAAQ---P----LVRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKC  135 (357)
T ss_dssp             CSEEEECCSC---C----CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGG
T ss_pred             CCEEEECCCC---c----ccccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHH
Confidence            8999999986   1    122345778899999999999999998753   12469999999763

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.78  E-value=8.4e-19  Score=128.50  Aligned_cols=134  Identities=16%  Similarity=0.143  Sum_probs=101.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++++++||||+|+||++++++|+++  |++|++++|++++.+++        ..++.++.+|++|+++++++++      
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~------   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQ------   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------CCCeeEEEecCCCHHHHHHHHc------
Confidence            4788999999999999999999999  89999999987654322        3456788999999998887765      


Q ss_pred             CccEEEEcCCCCCCCCCCC---------CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC
Q 031016           89 FVEVLVYNAYQPVSWQPTN---------FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA  159 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  159 (167)
                      .+|++||++|.   .....         ..+.+.++++..+++|+.++..+++.+.+    .+.++||++||..+..+.+
T Consensus        69 ~~d~vi~~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~  141 (253)
T 1xq6_A           69 GIDALVILTSA---VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDH  141 (253)
T ss_dssp             TCSEEEECCCC---CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTC
T ss_pred             CCCEEEEeccc---cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCCCCC
Confidence            58999999997   32211         12222345567889999999988887653    3446999999988766555


Q ss_pred             Cccccc
Q 031016          160 GFSELC  165 (167)
Q Consensus       160 ~~~~y~  165 (167)
                      +...|+
T Consensus       142 ~~~~~~  147 (253)
T 1xq6_A          142 PLNKLG  147 (253)
T ss_dssp             GGGGGG
T ss_pred             cccccc
Confidence            555554

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.77  E-value=1.1e-18  Score=132.48  Aligned_cols=121  Identities=17%  Similarity=0.122  Sum_probs=96.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ...++++||||+|+||++++++|+++|++|++++|+... ..    +      ++.++.+|++|+++++++++.    ++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~~~----~~   74 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVISD----IK   74 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHHHH----HC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHHHh----cC
Confidence            357899999999999999999999999999999997653 11    1      578889999999999988875    37


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|++||+||.   ...    ..+.++++..+++|+.++..+++++ +.+.  +.++||++||....
T Consensus        75 ~d~vih~A~~---~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~  130 (321)
T 2pk3_A           75 PDYIFHLAAK---SSV----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEY  130 (321)
T ss_dssp             CSEEEECCSC---CCH----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGT
T ss_pred             CCEEEEcCcc---cch----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhc
Confidence            9999999997   321    1223468899999999999999998 5442  34799999998654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.77  E-value=3.1e-18  Score=130.67  Aligned_cols=128  Identities=10%  Similarity=0.097  Sum_probs=102.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEE-EeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI-RIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+..+++.+.+....+.++.++ .+|++|+++++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            34689999999999999999999999999999999988776666655543234578888 799999887766554     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                       ++|++||+||.   ....       ++++..+++|+.++..+++++.+.   .+.++||++||....
T Consensus        83 -~~d~vih~A~~---~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~  136 (342)
T 1y1p_A           83 -GAAGVAHIASV---VSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSA  136 (342)
T ss_dssp             -TCSEEEECCCC---CSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGT
T ss_pred             -CCCEEEEeCCC---CCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHh
Confidence             68999999997   3221       346789999999999999998752   234699999998764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.77  E-value=3.5e-18  Score=130.70  Aligned_cols=126  Identities=13%  Similarity=0.033  Sum_probs=99.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      ++++||||+|+||++++++|+++|++|++++|+. ....+..+.+..  ..++.++.+|++|+++++++++..    ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~--~~~~~~~~~Dl~d~~~~~~~~~~~----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--LGNFEFVHGDIRNKNDVTRLITKY----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHH----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc--CCceEEEEcCCCCHHHHHHHHhcc----CCC
Confidence            5799999999999999999999999999998853 223333344433  236888999999999999888753    689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++||+||.   ...    +.+.++++..+++|+.++..+++++.+...+   ++||++||...
T Consensus        76 ~vih~A~~---~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~---~~iv~~SS~~v  128 (347)
T 1orr_A           76 SCFHLAGQ---VAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN---CNIIYSSTNKV  128 (347)
T ss_dssp             EEEECCCC---CCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT---CEEEEEEEGGG
T ss_pred             EEEECCcc---cCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---ceEEEeccHHH
Confidence            99999997   221    2334678899999999999999999876532   69999999764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.77  E-value=3.5e-19  Score=130.20  Aligned_cols=128  Identities=11%  Similarity=0.025  Sum_probs=99.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++|+++||||+|+||++++++|+++|+  +|++++|+++..++.       ...++.++.+|++|+++++++++     
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~-----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------AYKNVNQEVVDFEKLDDYASAFQ-----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------GGGGCEEEECCGGGGGGGGGGGS-----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-------ccCCceEEecCcCCHHHHHHHhc-----
Confidence            4578999999999999999999999999  999999987643221       11257888999999988766544     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                       ++|++|||||.   ...       .++++..+++|+.+++.+++.+.    +.+.++||++||..+..+  +...|++
T Consensus        84 -~~d~vi~~ag~---~~~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~~~~iv~~SS~~~~~~--~~~~Y~~  145 (242)
T 2bka_A           84 -GHDVGFCCLGT---TRG-------KAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADKS--SNFLYLQ  145 (242)
T ss_dssp             -SCSEEEECCCC---CHH-------HHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHH
T ss_pred             -CCCEEEECCCc---ccc-------cCCcccceeeeHHHHHHHHHHHH----HCCCCEEEEEccCcCCCC--CcchHHH
Confidence             68999999997   211       24578899999999988888754    445579999999876543  3445654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=1.8e-18  Score=134.04  Aligned_cols=131  Identities=16%  Similarity=0.130  Sum_probs=98.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-----HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-----LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      ++++||||+|+||++++++|+++|++|++++|+++.     ++++.+.+....+.++.++.+|++|+++++++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999987542     222111110001246888999999999999888865   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                       ++|++||+||.   ...    ..+.++++..+++|+.++..+++++.+...+ +.++||++||....
T Consensus       102 -~~d~vih~A~~---~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~  160 (375)
T 1t2a_A          102 -KPTEIYNLGAQ---SHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELY  160 (375)
T ss_dssp             -CCSEEEECCSC---CCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGT
T ss_pred             -CCCEEEECCCc---ccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhh
Confidence             68999999997   221    1235678899999999999999998876542 22699999997654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.76  E-value=1.1e-18  Score=134.84  Aligned_cols=133  Identities=12%  Similarity=0.052  Sum_probs=98.3

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHH--cCCeEEEEecChhhHHHHH------HHHHhhcCCcEEEEEeecC
Q 031016            1 MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAH--EGYTVAILARDLGRLSRFA------DEIAREEKSQVFAIRIDCS   72 (167)
Q Consensus         1 ~~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~--~g~~v~~~~r~~~~~~~~~------~~l~~~~~~~~~~~~~D~~   72 (167)
                      |..|.  +.+.+++++||||+|+||++++++|++  +|++|++++|+........      .......+.++.++.+|++
T Consensus         1 M~~~~--~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   78 (362)
T 3sxp_A            1 MRYID--DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADIN   78 (362)
T ss_dssp             CCSSS--CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTT
T ss_pred             Ccccc--hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCC
Confidence            44443  345789999999999999999999999  9999999998654211000      0011113446789999999


Q ss_pred             CHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           73 DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        73 ~~~~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      |+++++++     ...++|++||+||.   ...      +.++++..+++|+.++..+++++.    +. +++||++||.
T Consensus        79 d~~~~~~~-----~~~~~D~vih~A~~---~~~------~~~~~~~~~~~Nv~gt~~ll~aa~----~~-~~~~V~~SS~  139 (362)
T 3sxp_A           79 NPLDLRRL-----EKLHFDYLFHQAAV---SDT------TMLNQELVMKTNYQAFLNLLEIAR----SK-KAKVIYASSA  139 (362)
T ss_dssp             CHHHHHHH-----TTSCCSEEEECCCC---CGG------GCCCHHHHHHHHTHHHHHHHHHHH----HT-TCEEEEEEEG
T ss_pred             CHHHHHHh-----hccCCCEEEECCcc---CCc------cccCHHHHHHHHHHHHHHHHHHHH----Hc-CCcEEEeCcH
Confidence            99998876     12579999999997   221      346788999999999999999874    22 3569999995


Q ss_pred             cc
Q 031016          153 AS  154 (167)
Q Consensus       153 ~~  154 (167)
                      ..
T Consensus       140 ~v  141 (362)
T 3sxp_A          140 GV  141 (362)
T ss_dssp             GG
T ss_pred             HH
Confidence            43

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.76  E-value=2.1e-18  Score=133.91  Aligned_cols=131  Identities=18%  Similarity=0.160  Sum_probs=101.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-----HHHHHHHHHhhcCC-cEEEEEeecCCHHHHHHHHHHHHh
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-----LSRFADEIAREEKS-QVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      |+++||||+|+||.+++++|+++|++|++++|+...     ++.+.+.+.. .+. ++.++.+|++|+++++++++.+  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRWIDVI--  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc-ccccceEEEECCCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999987543     2222221111 123 6888999999999999888865  


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASL  155 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~  155 (167)
                        ++|++||+||.   ...    ..+.++++..+++|+.++..+++++.+...++ +.++||++||....
T Consensus       106 --~~d~Vih~A~~---~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vy  166 (381)
T 1n7h_A          106 --KPDEVYNLAAQ---SHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMF  166 (381)
T ss_dssp             --CCSEEEECCSC---CCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGG
T ss_pred             --CCCEEEECCcc---cCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHh
Confidence              68999999997   221    13356788999999999999999999877553 24699999997643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.76  E-value=3.5e-18  Score=130.94  Aligned_cols=129  Identities=11%  Similarity=0.088  Sum_probs=98.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh------HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR------LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++++||||+|+||.+++++|+++|++|++++|+...      ..+..+.+....+.++.++.+|++|++++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            4789999999999999999999999999999875432      122223332213457889999999999998887752 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                         ++|++||+||.   ....    .+.++++..+++|+.++..+++.+.    +.+.++||++||....
T Consensus        81 ---~~d~vih~A~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~  136 (348)
T 1ek6_A           81 ---SFMAVIHFAGL---KAVG----ESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVY  136 (348)
T ss_dssp             ---CEEEEEECCSC---CCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGG
T ss_pred             ---CCCEEEECCCC---cCcc----chhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHh
Confidence               79999999997   3211    1346778899999999999988754    3345699999997653

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.76  E-value=2e-17  Score=129.12  Aligned_cols=133  Identities=14%  Similarity=0.091  Sum_probs=99.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH----------------HHHHHHHhhcCCcEEEEEeecCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS----------------RFADEIAREEKSQVFAIRIDCSD   73 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~D~~~   73 (167)
                      +++..+|||||+|.||.+++++|+++|++|++++|......                +..+.+....+.++.++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            46788999999999999999999999999999988643311                11111111134578899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCC
Q 031016           74 SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCS  152 (167)
Q Consensus        74 ~~~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~  152 (167)
                      +++++++++..    ++|++||+||.   .... ....+.+++...+++|+.++..+++++.+.    +. .+||++||.
T Consensus        89 ~~~~~~~~~~~----~~D~Vih~A~~---~~~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~  156 (404)
T 1i24_A           89 FEFLAESFKSF----EPDSVVHFGEQ---RSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTM  156 (404)
T ss_dssp             HHHHHHHHHHH----CCSEEEECCSC---CCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCG
T ss_pred             HHHHHHHHhcc----CCCEEEECCCC---CCcc-chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcH
Confidence            99999888764    68999999997   3221 112356778889999999999999988653    22 499999997


Q ss_pred             cc
Q 031016          153 AS  154 (167)
Q Consensus       153 ~~  154 (167)
                      ..
T Consensus       157 ~v  158 (404)
T 1i24_A          157 GE  158 (404)
T ss_dssp             GG
T ss_pred             HH
Confidence            54

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.75  E-value=1.4e-17  Score=129.80  Aligned_cols=128  Identities=16%  Similarity=0.118  Sum_probs=98.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHH-HcCCeEEEEecChhh---------HHHHHHHHHhhcC----Cc---EEEEEeecCCHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFA-HEGYTVAILARDLGR---------LSRFADEIAREEK----SQ---VFAIRIDCSDSR   75 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~-~~g~~v~~~~r~~~~---------~~~~~~~l~~~~~----~~---~~~~~~D~~~~~   75 (167)
                      .++|||||+|+||.+++++|+ ++|++|++++|+...         .+.+.+.++...+    .+   +.++.+|++|++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            369999999999999999999 999999999987543         3444333333111    24   889999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           76 SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        76 ~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++++++++   ++++|++||+||.   ....    .+.++++..+++|+.+++.+++++.    +.+.++||++||...
T Consensus        83 ~~~~~~~~---~~~~d~vih~A~~---~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           83 FLNGVFTR---HGPIDAVVHMCAF---LAVG----ESVRDPLKYYDNNVVGILRLLQAML----LHKCDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHH---SCCCCEEEECCCC---CCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGG
T ss_pred             HHHHHHHh---cCCCCEEEECCCc---cCcC----cchhhHHHHHHHHhHHHHHHHHHHH----HhCCCEEEEECCHHH
Confidence            98887765   3569999999997   3221    1456788999999999999999864    334569999999654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.75  E-value=4.8e-18  Score=129.98  Aligned_cols=129  Identities=16%  Similarity=0.072  Sum_probs=102.3

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcC-------CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEG-------YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      ..+++++++||||+|+||.+++++|+++|       ++|++++|+.....+      . ...++.++.+|++|+++++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~-~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G-FSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T-CCSEEEEEECCTTSTTHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c-cCCceeEEEcCCCCHHHHHHH
Confidence            34578899999999999999999999999       899999987643211      1 345788999999999998887


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCcccc
Q 031016           81 FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLN  156 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~  156 (167)
                      ++     +++|++||+||.   ..     ..+.++++..+++|+.++..+++++.+...++ +.++||++||.....
T Consensus        83 ~~-----~~~d~vih~A~~---~~-----~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~  146 (342)
T 2hrz_A           83 VE-----ARPDVIFHLAAI---VS-----GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFG  146 (342)
T ss_dssp             HH-----TCCSEEEECCCC---CH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCC
T ss_pred             Hh-----cCCCEEEECCcc---Cc-----ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhC
Confidence            75     479999999997   32     12457789999999999999999987654322 136999999986543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.74  E-value=8e-18  Score=128.64  Aligned_cols=123  Identities=12%  Similarity=0.073  Sum_probs=95.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.+++++||||+|+||++++++|+++|++|++++|+.....+   .+.. . .++.++.+|++|+++++++++.    ++
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~-~-~~~~~~~~Dl~d~~~~~~~~~~----~~   89 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD-H-PNLTFVEGSIADHALVNQLIGD----LQ   89 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC-C-TTEEEEECCTTCHHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh-c-CCceEEEEeCCCHHHHHHHHhc----cC
Confidence            467899999999999999999999999999999987543111   1111 1 4688899999999999888875    26


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|++||+||.   ....     +.++++  +++|+.++..+++++.+.    +.++||++||....
T Consensus        90 ~D~vih~A~~---~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~~iV~~SS~~~~  141 (333)
T 2q1w_A           90 PDAVVHTAAS---YKDP-----DDWYND--TLTNCVGGSNVVQAAKKN----NVGRFVYFQTALCY  141 (333)
T ss_dssp             CSEEEECCCC---CSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGG
T ss_pred             CcEEEECcee---cCCC-----ccCChH--HHHHHHHHHHHHHHHHHh----CCCEEEEECcHHHh
Confidence            8999999997   3221     335555  999999999999998752    44699999997654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.74  E-value=1.1e-17  Score=128.70  Aligned_cols=131  Identities=14%  Similarity=0.049  Sum_probs=100.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh----hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG----RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.+++++||||+|+||++++++|+++|++|++++|+..    .++++.+.+......++.++.+|++|+++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            46789999999999999999999999999999998653    23333332211113578899999999988887765   


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                         ++|++||+||.   ....    .+.++++..+++|+.++..+++++.+.    +.++||++||.....+
T Consensus       102 ---~~d~vih~A~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~  159 (352)
T 1sb8_A          102 ---GVDYVLHQAAL---GSVP----RSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGD  159 (352)
T ss_dssp             ---TCSEEEECCSC---CCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTT
T ss_pred             ---CCCEEEECCcc---cCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCC
Confidence               68999999997   2211    234678899999999999999988653    3469999999876543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.74  E-value=1.1e-17  Score=127.86  Aligned_cols=130  Identities=17%  Similarity=0.179  Sum_probs=95.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .++|++|||||+|+||.+++++|+++|++|+++.|+.+...+.... ....  ..++.++.+|++|+++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL-LDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHH-HTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHH-HhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            4678999999999999999999999999999999887644333221 1101  1258889999999988877665     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                       .+|++||+|+.   ..   ...  .+..+..+++|+.++..+++++.+..   ..++||++||..+..+
T Consensus        77 -~~d~Vih~A~~---~~---~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~  134 (337)
T 2c29_D           77 -GCTGVFHVATP---MD---FES--KDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNI  134 (337)
T ss_dssp             -TCSEEEECCCC---CC---SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSC
T ss_pred             -CCCEEEEeccc---cC---CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhccc
Confidence             47999999986   31   111  12345789999999999999987643   1369999999876543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.73  E-value=1.5e-17  Score=126.98  Aligned_cols=127  Identities=12%  Similarity=0.050  Sum_probs=93.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|+||++++++|+++|++|++++|......+..+.+....+.++.++.+|++|+++++++++..    ++|++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~D~v   77 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH----AIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT----TCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc----CCCEE
Confidence            58999999999999999999999999998764321111122222213456788999999999998887752    69999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ||+||.   ....    ...++++..+++|+.+++.+++.+.    +.+.++||++||....
T Consensus        78 ih~A~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~  128 (338)
T 1udb_A           78 IHFAGL---KAVG----ESVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVY  128 (338)
T ss_dssp             EECCSC---CCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGG
T ss_pred             EECCcc---Cccc----cchhcHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEEccHHHh
Confidence            999997   3211    1235567889999999999988653    3345699999997643

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.73  E-value=1.2e-17  Score=128.15  Aligned_cols=129  Identities=15%  Similarity=0.034  Sum_probs=100.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC----CcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK----SQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++++++||||+|.||++++++|+++|++|++++|+.....+..+.+.....    .++.++.+|++|+++++++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            4678999999999999999999999999999999976543333333332111    578999999999998877665   


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                         ++|++||+||.   ...    ..+.+++...+++|+.++..+++++...    +..++|++||....
T Consensus       100 ---~~d~Vih~A~~---~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy  155 (351)
T 3ruf_A          100 ---GVDHVLHQAAL---GSV----PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTY  155 (351)
T ss_dssp             ---TCSEEEECCCC---CCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGG
T ss_pred             ---CCCEEEECCcc---CCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhc
Confidence               68999999997   221    2344667889999999999999987543    34599999997654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.73  E-value=2.9e-17  Score=125.85  Aligned_cols=114  Identities=11%  Similarity=0.097  Sum_probs=91.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..++|++|||||+|+||.+++++|+++|++|++++|++..             .++.++.+|++|+++++++++      
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~------   76 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIM------   76 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHT------
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHh------
Confidence            4468899999999999999999999999999999997653             356788999999998887765      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++|++||+|+.   ..      .+.++++..+++|+.++..+++++..    .+.++||++||...
T Consensus        77 ~~d~vih~A~~---~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~v  129 (347)
T 4id9_A           77 GVSAVLHLGAF---MS------WAPADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEV  129 (347)
T ss_dssp             TCSEEEECCCC---CC------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGG
T ss_pred             CCCEEEECCcc---cC------cchhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHH
Confidence            68999999987   22      23455689999999999999998753    34469999999653

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.73  E-value=7e-18  Score=121.77  Aligned_cols=113  Identities=15%  Similarity=0.160  Sum_probs=91.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~i~~   92 (167)
                      +++||||+|+||++++++|+++|++|++++|++++..+         ..++.++.+|++| +++++++++      ++|+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~------~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLH------GMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTT------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHc------CCCE
Confidence            48999999999999999999999999999998765322         1468999999999 888776654      5899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      +||++|.   ..            ...+++|+.++..+++++.    +.+.++||++||..+..+.+.
T Consensus        67 vi~~ag~---~~------------~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~  115 (219)
T 3dqp_A           67 IINVSGS---GG------------KSLLKVDLYGAVKLMQAAE----KAEVKRFILLSTIFSLQPEKW  115 (219)
T ss_dssp             EEECCCC---TT------------SSCCCCCCHHHHHHHHHHH----HTTCCEEEEECCTTTTCGGGC
T ss_pred             EEECCcC---CC------------CCcEeEeHHHHHHHHHHHH----HhCCCEEEEECcccccCCCcc
Confidence            9999998   33            1278899999998888873    444569999999887765554

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.72  E-value=2.7e-17  Score=125.41  Aligned_cols=128  Identities=16%  Similarity=0.068  Sum_probs=97.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH-HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS-RFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .++++|||||+|+||.+++++|+++|++|++++|+..... ...+.+.  ...++.++.+|++|+++++++++.+    +
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----~   86 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA----Q   86 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH----C
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHHHHHc----C
Confidence            5788999999999999999999999999999999765311 1111111  1346889999999999999888865    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  155 (167)
                      +|++||+||.   ...    ..+.++++..+++|+.++..+++++.+.    + .++||++||....
T Consensus        87 ~d~Vih~A~~---~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~  142 (335)
T 1rpn_A           87 PQEVYNLAAQ---SFV----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMF  142 (335)
T ss_dssp             CSEEEECCSC---CCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGG
T ss_pred             CCEEEECccc---cch----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHh
Confidence            8999999997   221    1123457889999999999999988643    3 2699999997553

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.72  E-value=3.6e-17  Score=126.25  Aligned_cols=147  Identities=11%  Similarity=0.010  Sum_probs=109.8

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHH-HcCCeEEEEecChh------------hHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFA-HEGYTVAILARDLG------------RLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~-~~g~~v~~~~r~~~------------~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      ..+|++||||+++|||++.+..|+ ..|+.++++++..+            ......+.++. .+.+...+.||+++++.
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~-~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR-EGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-HTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH-cCCCceeEeCCCCCHHH
Confidence            457999999999999999999999 67999988877532            13345556666 78899999999999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCC----------CCCC---------------------CCCCCHHHHHHHhhhh-
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSW----------QPTN---------------------FTEISFDSFQKSIAIS-  123 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~----------~~~~---------------------~~~~~~~~~~~~~~~n-  123 (167)
                      ++++++++. ++|+||+|||+++.....          ...|                     +...+.++++....+. 
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            999999999 999999999999972100          0001                     1234566666655554 


Q ss_pred             --hHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC
Q 031016          124 --SLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA  159 (167)
Q Consensus       124 --~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  159 (167)
                        ..+.+...+...+.|.+  ++++|.+|+..+....|
T Consensus       207 ~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P  242 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQA  242 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHH
T ss_pred             hhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeec
Confidence              44555666666667755  48999999988765554

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.71  E-value=1.6e-17  Score=127.87  Aligned_cols=126  Identities=16%  Similarity=0.145  Sum_probs=98.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc-CCeEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE-GYTVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++||||+|+||++++++|+++ |++|++++|+.  ...+.+ +.+.  ...++.++.+|++|++++++++++.    ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS--ESNRYNFEHADICDSAEITRIFEQY----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHHHH----CC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh--cCCCeEEEECCCCCHHHHHHHHhhc----CC
Confidence            3899999999999999999998 79999998864  222221 1111  1347889999999999999888753    79


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-----CceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-----KGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~  153 (167)
                      |++||+||.   ..    .+.+.++++..+++|+.+++.+++++.+.|...+     .++||++||..
T Consensus        75 d~vih~A~~---~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~  135 (361)
T 1kew_A           75 DAVMHLAAE---SH----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE  135 (361)
T ss_dssp             SEEEECCSC---CC----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG
T ss_pred             CEEEECCCC---cC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH
Confidence            999999997   32    1234567888999999999999999998875321     25999999965

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.71  E-value=3.6e-17  Score=124.97  Aligned_cols=119  Identities=14%  Similarity=0.167  Sum_probs=88.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|+||.+++++|+++|++|++++|++...+++       ...++.++.+|++|+++++++++      ++|++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-------~~~~~~~~~~Dl~d~~~~~~~~~------~~d~v   81 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-------AYLEPECRVAEMLDHAGLERALR------GLDGV   81 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-------GGGCCEEEECCTTCHHHHHHHTT------TCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-------ccCCeEEEEecCCCHHHHHHHHc------CCCEE
Confidence            799999999999999999999999999999987653321       11257888999999988877665      58999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      ||+||.   ..      .+.++++..+++|+.++..+++++.+.    +.++||++||.....+.
T Consensus        82 ih~a~~---~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~  133 (342)
T 2x4g_A           82 IFSAGY---YP------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRH  133 (342)
T ss_dssp             EEC---------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCC
T ss_pred             EECCcc---Cc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcC
Confidence            999997   32      234678889999999999999998764    34699999998765443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.71  E-value=3.5e-17  Score=124.82  Aligned_cols=124  Identities=11%  Similarity=0.096  Sum_probs=95.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChh--hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLG--RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++++||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+.  ...++.++.+|++|++++++++.     
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE--DDPRYTFVKGDVADYELVKELVR-----   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc--cCCceEEEEcCCCCHHHHHHHhh-----
Confidence            3469999999999999999999997  89999988642  11111 1111  13478899999999999888773     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                       ++|++||+||.   ..    .+.+.++++..+++|+.++..+++++.+.   ...++||++||...
T Consensus        75 -~~d~vih~A~~---~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~v  130 (336)
T 2hun_A           75 -KVDGVVHLAAE---SH----VDRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEV  130 (336)
T ss_dssp             -TCSEEEECCCC---CC----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGG
T ss_pred             -CCCEEEECCCC---cC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHH
Confidence             68999999997   32    12344677889999999999999999876   12369999999753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.71  E-value=3.7e-17  Score=119.39  Aligned_cols=114  Identities=15%  Similarity=0.202  Sum_probs=86.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+..|+++||||+|+||++++++|+++| ++|++++|+++.+.+.       ...++.++.+|++|+++++++++     
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------YPTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------CCTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------ccCCcEEEEecCCCHHHHHHHhc-----
Confidence            3457899999999999999999999999 8999999987654321       33478999999999999988776     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                       .+|++|||+|.   ..           +           ...++.+++.+++.+.++||++||.....+.++
T Consensus        88 -~~D~vv~~a~~---~~-----------~-----------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~  134 (236)
T 3qvo_A           88 -GQDIVYANLTG---ED-----------L-----------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPG  134 (236)
T ss_dssp             -TCSEEEEECCS---TT-----------H-----------HHHHHHHHHHHHHTTCCEEEEECCCCC------
T ss_pred             -CCCEEEEcCCC---Cc-----------h-----------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCc
Confidence             57999999986   10           1           123567888888877789999999887655443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.71  E-value=3.5e-17  Score=123.86  Aligned_cols=115  Identities=15%  Similarity=0.204  Sum_probs=68.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++++||||+|+||++++++|+++|++|++++|+.+.         .    +  ++.+|++++++++++++..    ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~----~--~~~~Dl~d~~~~~~~~~~~----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------P----K--FEQVNLLDSNAVHHIIHDF----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHH----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------C----C--eEEecCCCHHHHHHHHHhh----CCC
Confidence            5789999999999999999999999999999986542         1    1  5678999999998888764    689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ++||+||.   ...    ..+.++++..+++|+.++..+++++.+.    + ++||++||.....+
T Consensus        63 ~vih~A~~---~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~  116 (315)
T 2ydy_A           63 VIVHCAAE---RRP----DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDG  116 (315)
T ss_dssp             EEEECC--------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCS
T ss_pred             EEEECCcc---cCh----hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCC
Confidence            99999997   322    2245778899999999999999998752    2 49999999876543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.70  E-value=1.4e-17  Score=127.19  Aligned_cols=124  Identities=19%  Similarity=0.199  Sum_probs=90.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH--HHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF--ADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+...+.  ...+.  ...++.++.+|++|+++++++++      .
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIA------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHT------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHc------C
Confidence            68899999999999999999999999999988876532211  11222  12468889999999988877665      4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|++||+|+.   ..   ..  ..+..++.+++|+.+++.+++++.+..   +.++||++||..+
T Consensus        81 ~D~Vih~A~~---~~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~  134 (338)
T 2rh8_A           81 CDFVFHVATP---VH---FA--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAA  134 (338)
T ss_dssp             CSEEEEESSC---CC---C-----------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHH
T ss_pred             CCEEEEeCCc---cC---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHH
Confidence            7999999986   31   11  112234589999999999999987543   1359999999764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.70  E-value=1.5e-17  Score=123.46  Aligned_cols=115  Identities=11%  Similarity=0.107  Sum_probs=93.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +|+++||||+|+||++++++|+++|++|++++|++...          ....+.++.+|++|+++++++++      .+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~------~~d   65 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----------AEAHEEIVACDLADAQAVHDLVK------DCD   65 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----------CCTTEEECCCCTTCHHHHHHHHT------TCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----------cCCCccEEEccCCCHHHHHHHHc------CCC
Confidence            36899999999999999999999999999999976531          11357888999999998887765      589


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ++||+||.   .        +.++++..+++|+.++..+++.+.+    .+.++||++||.....+
T Consensus        66 ~vi~~a~~---~--------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~  116 (267)
T 3ay3_A           66 GIIHLGGV---S--------VERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGY  116 (267)
T ss_dssp             EEEECCSC---C--------SCCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTT
T ss_pred             EEEECCcC---C--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCC
Confidence            99999997   3        1245788999999999999998764    34569999999876543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.69  E-value=8e-17  Score=126.99  Aligned_cols=123  Identities=10%  Similarity=0.042  Sum_probs=92.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh---hHHHHHHHHHhh--------cCCcEEEEEeecCCHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG---RLSRFADEIARE--------EKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~---~~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~   78 (167)
                      ..+++++||||+|+||.+++++|+++|++|++++|++.   ...++.+.++..        ...++.++.+|+++++.+.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            35789999999999999999999999999999999876   334444433321        2467999999999988777


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           79 EAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        79 ~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                             ..+++|++||+||.   ..       ..++++..+++|+.++..+++++.+     +..+||++||...
T Consensus       147 -------~~~~~d~Vih~A~~---~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~  200 (427)
T 4f6c_A          147 -------LPENMDTIIHAGAR---TD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  200 (427)
T ss_dssp             -------CSSCCSEEEECCCC---C--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG
T ss_pred             -------CcCCCCEEEECCcc---cC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh
Confidence                   24689999999997   32       2357888999999999999999876     2369999999876

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.68  E-value=8.6e-17  Score=116.39  Aligned_cols=115  Identities=13%  Similarity=0.113  Sum_probs=91.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ++++||||+|+||++++++|+++|++|++++|+++...+        ...++.++.+|++|+++++++++      .+|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--------ENEHLKVKKADVSSLDEVCEVCK------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC--------CCTTEEEECCCTTCHHHHHHHHT------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh--------ccCceEEEEecCCCHHHHHHHhc------CCCE
Confidence            679999999999999999999999999999998765321        23578999999999999887776      5899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      +||++|.   ...          ....+++|+.++..+++.+.+    .+..++|++||.....+.
T Consensus        71 vi~~a~~---~~~----------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~  119 (227)
T 3dhn_A           71 VISAFNP---GWN----------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIA  119 (227)
T ss_dssp             EEECCCC-------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEE
T ss_pred             EEEeCcC---CCC----------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCC
Confidence            9999987   211          112688999999888887654    344599999998765543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.68  E-value=9.2e-17  Score=124.84  Aligned_cols=123  Identities=14%  Similarity=0.034  Sum_probs=95.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..++++++||||+|+||++++++|+++|++|++++|+.......       ...++.++.+|++|+++++++++      
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------DMFCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------GGTCSEEEECCTTSHHHHHHHHT------
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------ccCCceEEECCCCCHHHHHHHhC------
Confidence            33568999999999999999999999999999999976542110       12357888999999998887765      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++|++||+|+.   .....   .+.++++..+++|+.++..+++++..    .+.++||++||...
T Consensus        93 ~~d~Vih~A~~---~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v  148 (379)
T 2c5a_A           93 GVDHVFNLAAD---MGGMG---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACI  148 (379)
T ss_dssp             TCSEEEECCCC---CCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGG
T ss_pred             CCCEEEECcee---cCccc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehhe
Confidence            68999999997   32111   11356788999999999999998853    33459999999654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.68  E-value=1e-16  Score=122.82  Aligned_cols=129  Identities=10%  Similarity=0.064  Sum_probs=92.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChh--hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLG--RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+.+++++||||+|.||.+++++|+++|  ++|+..+|...  ....+ +.+.  ...++.++.+|++|++.++++++..
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV-KSIQ--DHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh-hhhc--cCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            3567899999999999999999999999  67777776532  11111 1110  2347899999999999999988864


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                          ++|++||+|+.   ...    ..+.++++..+++|+.++..+++++.+.    +..+||++||....
T Consensus        98 ----~~d~Vih~A~~---~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy  153 (346)
T 4egb_A           98 ----DVQVIVNFAAE---SHV----DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVY  153 (346)
T ss_dssp             ----TCCEEEECCCC---C-------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGG
T ss_pred             ----CCCEEEECCcc---cch----hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHh
Confidence                68999999997   322    1244677889999999999999887643    34689999997543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.68  E-value=3.3e-16  Score=111.37  Aligned_cols=123  Identities=15%  Similarity=0.134  Sum_probs=91.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++++||||+|+||++++++|+++|++|++++|+++.....       ...++.++.+|++|+++++++++      .+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~------~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVA------GQD   69 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHT------TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------cCCceEEEEecCCCHHHHHHHHc------CCC
Confidence            36899999999999999999999999999999987653211       14568899999999998887765      479


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC----Cccccc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA----GFSELC  165 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----~~~~y~  165 (167)
                      ++||++|.   ...   .+        ..++|+.++..+++.+.+    .+.+++|++||.......+    +...|+
T Consensus        70 ~vi~~a~~---~~~---~~--------~~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~  129 (206)
T 1hdo_A           70 AVIVLLGT---RND---LS--------PTTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVT  129 (206)
T ss_dssp             EEEECCCC---TTC---CS--------CCCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHH
T ss_pred             EEEECccC---CCC---CC--------ccchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCcccccccchhHH
Confidence            99999997   322   11        124788888777777653    3446999999986554433    344554

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.67  E-value=3.7e-16  Score=118.85  Aligned_cols=121  Identities=17%  Similarity=0.150  Sum_probs=95.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ++++||||+|+||.+++++|+++|++|++++|+.....   +   . ...++.++.+|++|++++++++++    .++|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~---~-~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D---A-ITEGAKFYNGDLRDKAFLRDVFTQ----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G---G-SCTTSEEEECCTTCHHHHHHHHHH----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h---h-cCCCcEEEECCCCCHHHHHHHHhh----cCCCE
Confidence            57999999999999999999999999999988654321   1   1 223678899999999998888775    37999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +||+||.   ....    .+.++++..+++|+.++..+++++.    +.+.++||++||....
T Consensus        71 vih~a~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~  122 (330)
T 2c20_A           71 VMHFAAD---SLVG----VSMEKPLQYYNNNVYGALCLLEVMD----EFKVDKFIFSSTAATY  122 (330)
T ss_dssp             EEECCCC---CCHH----HHHHSHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGG
T ss_pred             EEECCcc---cCcc----ccccCHHHHHHHHhHHHHHHHHHHH----HcCCCEEEEeCCceee
Confidence            9999997   3211    1346788999999999999998864    3344699999996643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.67  E-value=1.3e-16  Score=120.91  Aligned_cols=127  Identities=18%  Similarity=0.204  Sum_probs=90.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-Chhh---HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGR---LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +|++|||||+|+||++++++|+++|++|+++.| +++.   ...+ ..+.. ...++.++.+|++|+++++++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPG-ASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTT-HHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhc-cCCceEEEecCCCCHHHHHHHHc-----
Confidence            578999999999999999999999999999888 5432   1111 11110 11257888999999998887765     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                       .+|++||+|+.   .   ...  ..+.++..+++|+.+++.+++++.+..   +.++||++||..+..+
T Consensus        74 -~~d~vih~A~~---~---~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~  131 (322)
T 2p4h_X           74 -GCVGIFHTASP---I---DFA--VSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSF  131 (322)
T ss_dssp             -TCSEEEECCCC---C-------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSC
T ss_pred             -CCCEEEEcCCc---c---cCC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHccc
Confidence             47999999975   2   111  112245689999999999999987542   3469999999876543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.67  E-value=2.8e-16  Score=130.85  Aligned_cols=131  Identities=11%  Similarity=0.128  Sum_probs=96.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++++++||||+|+||++++++|+++|++|++++|+.....+..+.+......++.++.+|+++++++++++++.    
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~----   83 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY----   83 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS----
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC----
Confidence            4568999999999999999999999999999999986543222222232213456788999999999998887753    


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++|++||+||.   .....    ..+.....+++|+.++..+++++.    +.+.++||++||...
T Consensus        84 ~~D~Vih~A~~---~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~~iV~~SS~~v  138 (699)
T 1z45_A           84 KIDSVIHFAGL---KAVGE----STQIPLRYYHNNILGTVVLLELMQ----QYNVSKFVFSSSATV  138 (699)
T ss_dssp             CCCEEEECCSC---CCHHH----HHHSHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGG
T ss_pred             CCCEEEECCcc---cCcCc----cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEECcHHH
Confidence            68999999997   32211    123446689999999999887654    334569999999764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.67  E-value=4.1e-17  Score=126.67  Aligned_cols=124  Identities=10%  Similarity=0.078  Sum_probs=94.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+++++++||||+|+||.+++++|+++| ++|++++|+.....+   .+.  ...++.++.+|++|+++++++++     
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~--~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP--DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC--CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc--CCCceEEEECCCCCHHHHHHHhh-----
Confidence            4567899999999999999999999999 999999987543211   110  13568899999999987765544     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCcc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSAS  154 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~  154 (167)
                       ++|++||+||.   ...    ..+.++++..+++|+.++..+++++..    . +.++||++||...
T Consensus        99 -~~d~Vih~A~~---~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~v  154 (377)
T 2q1s_A           99 -EYDYVFHLATY---HGN----QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCS  154 (377)
T ss_dssp             -CCSEEEECCCC---SCH----HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--
T ss_pred             -CCCEEEECCCc---cCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHH
Confidence             68999999997   221    123467788999999999999988743    2 3459999999653

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.66  E-value=1.1e-16  Score=121.10  Aligned_cols=117  Identities=18%  Similarity=0.193  Sum_probs=92.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|+||++++++|+++|++|++++|......+      . ...++.++.+|++|++++++++++.    ++|.+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~-~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~v   70 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------N-VPKGVPFFRVDLRDKEGVERAFREF----RPTHV   70 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------G-SCTTCCEECCCTTCHHHHHHHHHHH----CCSEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------h-cccCeEEEECCCCCHHHHHHHHHhc----CCCEE
Confidence            48999999999999999999999999999884322110      1 1235678899999999998888753    68999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      ||+|+.   ...    ..+.++++..+++|+.+++.+++++..    .+.++||++||.
T Consensus        71 i~~a~~---~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~  118 (311)
T 2p5y_A           71 SHQAAQ---ASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTG  118 (311)
T ss_dssp             EECCSC---CCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEH
T ss_pred             EECccc---cCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCC
Confidence            999987   221    134567889999999999999998753    334699999997

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.66  E-value=1.5e-16  Score=120.43  Aligned_cols=117  Identities=14%  Similarity=0.131  Sum_probs=87.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ++++||||+|+||++++++|+++|+.|++..++....+.        ....+.++.+|+++ +++.++++      ++|.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~Dl~~-~~~~~~~~------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF--------VNEAARLVKADLAA-DDIKDYLK------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG--------SCTTEEEECCCTTT-SCCHHHHT------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh--------cCCCcEEEECcCCh-HHHHHHhc------CCCE
Confidence            569999999999999999999999544444444332111        24468899999998 77776665      6899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +||+|+.   .    ....+.++++..+++|+.+++.+++.+.    +.+.++||++||....
T Consensus        67 vih~a~~---~----~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~vy  118 (313)
T 3ehe_A           67 VWHIAAN---P----DVRIGAENPDEIYRNNVLATYRLLEAMR----KAGVSRIVFTSTSTVY  118 (313)
T ss_dssp             EEECCCC---C----CCC-CCCCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEECCGGGG
T ss_pred             EEECCCC---C----ChhhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeCchHHh
Confidence            9999986   2    2234556788999999999999998854    3345699999997654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.66  E-value=5.7e-17  Score=122.48  Aligned_cols=117  Identities=15%  Similarity=0.094  Sum_probs=90.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ++++||||+|+||++++++|+++|++|++++|+.+...+.       ....+.++.+|++|++ +.++++      . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dl~d~~-~~~~~~------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------VNPSAELHVRDLKDYS-WGAGIK------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------SCTTSEEECCCTTSTT-TTTTCC------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------cCCCceEEECccccHH-HHhhcC------C-CE
Confidence            3699999999999999999999999999999876542211       2446788999999987 543332      3 99


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +||+|+.   .    ....+.++++..+++|+.++..+++++..    .+.++||++||....
T Consensus        66 vih~A~~---~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vy  117 (312)
T 3ko8_A           66 VFHFAAN---P----EVRLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVY  117 (312)
T ss_dssp             EEECCSS---C----SSSGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGG
T ss_pred             EEECCCC---C----CchhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHh
Confidence            9999986   2    22345567888999999999999998743    344699999997654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.66  E-value=2.9e-16  Score=117.62  Aligned_cols=108  Identities=17%  Similarity=0.182  Sum_probs=89.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ...++++||||+|.||++++++|+++|++|++++|+                      .+|++|+++++++++..    +
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~----~   63 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEK----K   63 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHH----C
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhc----C
Confidence            357889999999999999999999999999999985                      26999999998888754    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|++||+||.   ...    +.+.++++..+++|+.++..+++++.+.    + .+||++||....
T Consensus        64 ~d~vih~A~~---~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~  117 (292)
T 1vl0_A           64 PNVVINCAAH---TAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVF  117 (292)
T ss_dssp             CSEEEECCCC---CCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGS
T ss_pred             CCEEEECCcc---CCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeE
Confidence            8999999997   221    2234778899999999999999998652    3 399999997654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.66  E-value=1.8e-16  Score=121.38  Aligned_cols=121  Identities=11%  Similarity=0.030  Sum_probs=93.6

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ++++||||+|+||.+++++|+++  |++|++++|+... ..+   .+......++.++.+|++|+++++++++      .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA---NLEAILGDRVELVVGDIADAELVDKLAA------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG---GTGGGCSSSEEEEECCTTCHHHHHHHHT------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChh---HHhhhccCCeEEEECCCCCHHHHHHHhh------c
Confidence            67999999999999999999999  8999999986421 111   1111123578899999999998887765      4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|++||+||.   ...    +.+.++++..+++|+.++..+++++.+.    + ++||++||...
T Consensus        76 ~d~vih~A~~---~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~v  128 (348)
T 1oc2_A           76 ADAIVHYAAE---SHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEV  128 (348)
T ss_dssp             CSEEEECCSC---CCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGG
T ss_pred             CCEEEECCcc---cCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccce
Confidence            6999999997   221    2234667889999999999999998765    2 49999999753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.66  E-value=6.9e-16  Score=114.35  Aligned_cols=113  Identities=12%  Similarity=0.056  Sum_probs=91.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|+||++++++|++ |++|++++|++...        .    .   +.+|++|+++++++++..    ++|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~--------~----~---~~~Dl~~~~~~~~~~~~~----~~d~v   61 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ--------G----G---YKLDLTDFPRLEDFIIKK----RPDVI   61 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT--------T----C---EECCTTSHHHHHHHHHHH----CCSEE
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC--------C----C---ceeccCCHHHHHHHHHhc----CCCEE
Confidence            489999999999999999994 89999999976420        1    1   789999999999888865    68999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      ||+||.   ...    ..+.++++..+++|+.++..+++++.+    .+ ++||++||.....+.
T Consensus        62 i~~a~~---~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~  114 (273)
T 2ggs_A           62 INAAAM---TDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGE  114 (273)
T ss_dssp             EECCCC---CCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSS
T ss_pred             EECCcc---cCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCC
Confidence            999997   321    123578899999999999999999864    23 599999998876543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.65  E-value=3.3e-16  Score=121.13  Aligned_cols=120  Identities=12%  Similarity=0.151  Sum_probs=95.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC-CHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS-DSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~   87 (167)
                      +++++++||||+|.||.+++++|+++ |++|++++|+.+...++.      ...++.++.+|++ +++.++++++     
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~~d~~~~~~~~~-----   90 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV------KHERMHFFEGDITINKEWVEYHVK-----   90 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG------GSTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc------cCCCeEEEeCccCCCHHHHHHHhc-----
Confidence            46789999999999999999999998 999999999876543321      2357899999999 9999988887     


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       ++|++||+|+.   ....    ...++....+++|+.++..+++++...    + .++|++||..
T Consensus        91 -~~d~Vih~A~~---~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~  143 (372)
T 3slg_A           91 -KCDVILPLVAI---ATPA----TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSE  143 (372)
T ss_dssp             -HCSEEEECBCC---CCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGG
T ss_pred             -cCCEEEEcCcc---ccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHH
Confidence             37999999997   2211    123566788999999999988887543    3 5999999954

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.64  E-value=1.5e-15  Score=109.48  Aligned_cols=113  Identities=17%  Similarity=0.046  Sum_probs=84.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++||||+|+||++++++|+++|++|++++|+++.+.++       ...++.++.+|++|+++     +.   +..+|++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~~D~~d~~~-----~~---~~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-------LGATVATLVKEPLVLTE-----AD---LDSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------TCTTSEEEECCGGGCCH-----HH---HTTCSEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-------cCCCceEEecccccccH-----hh---cccCCEE
Confidence            389999999999999999999999999999987765432       23468899999999887     22   2578999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      ||++|.   .....           ..++|+.++    +.+++.+++.+ +++|++||..+..+.+.
T Consensus        67 i~~ag~---~~~~~-----------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~  114 (224)
T 3h2s_A           67 VDALSV---PWGSG-----------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGA  114 (224)
T ss_dssp             EECCCC---CTTSS-----------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTC
T ss_pred             EECCcc---CCCcc-----------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCC
Confidence            999998   31110           134566665    55555566666 89999999877655443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.62  E-value=7e-16  Score=116.38  Aligned_cols=120  Identities=9%  Similarity=0.003  Sum_probs=94.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +++++||||+|+||.+++++|+++  |++|++++|+.....     +..    ++.++.+|++|++++++++++.    +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~----~~~~~~~D~~d~~~~~~~~~~~----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN----SGPFEVVNALDFNQIEHLVEVH----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH----SSCEEECCTTCHHHHHHHHHHT----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC----CCceEEecCCCHHHHHHHHhhc----C
Confidence            467999999999999999999999  899999998765421     111    3567899999999998888753    6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      +|++||+||.   ...     ...++++..+++|+.++..+++++.+    .+.+++|++||.....
T Consensus        69 ~d~vih~a~~---~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~  123 (312)
T 2yy7_A           69 ITDIYLMAAL---LSA-----TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFG  123 (312)
T ss_dssp             CCEEEECCCC---CHH-----HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCC
T ss_pred             CCEEEECCcc---CCC-----chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhC
Confidence            8999999987   221     12356788999999999999998764    3345999999976543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.62  E-value=8.6e-16  Score=117.22  Aligned_cols=121  Identities=12%  Similarity=0.098  Sum_probs=92.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc---C---CeEEEEecChh--hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE---G---YTVAILARDLG--RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~---g---~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++||||+|+||++++++|+++   |   ++|++++|+..  ..+.+ +.+.  .+.++.++.+|++|++++++++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc--cCCCeEEEEcCCCCHHHHHHHh----
Confidence            4899999999999999999997   8   99999988542  11111 1111  1357889999999998887665    


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                        .++|++||+||.   ...    +.+.++++..+++|+.++..+++++.+.    +.++||++||...
T Consensus        75 --~~~d~Vih~A~~---~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~v  130 (337)
T 1r6d_A           75 --RGVDAIVHFAAE---SHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQV  130 (337)
T ss_dssp             --TTCCEEEECCSC---CCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             --cCCCEEEECCCc---cCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHH
Confidence              378999999997   221    1234567889999999999999998765    2359999999754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.62  E-value=2.4e-15  Score=108.06  Aligned_cols=110  Identities=15%  Similarity=0.146  Sum_probs=79.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|+||++++++|+++|++|++++|+++++.++       . ..+.++.+|++|+++     +.+   .++|++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~~~~~~D~~d~~~-----~~~---~~~d~v   65 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H-KDINILQKDIFDLTL-----SDL---SDQNVV   65 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C-SSSEEEECCGGGCCH-----HHH---TTCSEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c-CCCeEEeccccChhh-----hhh---cCCCEE
Confidence            489999999999999999999999999999998765432       1 467899999999887     222   478999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCC
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIA  159 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  159 (167)
                      ||++|.   ...             ....|+.++    +.+++.+++.+.+++|++||..+..+.+
T Consensus        66 i~~ag~---~~~-------------~~~~~~~~~----~~l~~a~~~~~~~~~v~~SS~~~~~~~~  111 (221)
T 3ew7_A           66 VDAYGI---SPD-------------EAEKHVTSL----DHLISVLNGTVSPRLLVVGGAASLQIDE  111 (221)
T ss_dssp             EECCCS---STT-------------TTTSHHHHH----HHHHHHHCSCCSSEEEEECCCC------
T ss_pred             EECCcC---Ccc-------------ccchHHHHH----HHHHHHHHhcCCceEEEEecceEEEcCC
Confidence            999997   221             133455555    4455555666668999999988765543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.61  E-value=1.4e-16  Score=114.24  Aligned_cols=122  Identities=9%  Similarity=-0.060  Sum_probs=93.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++++++||||+|+||++++++|+++|+  +|++++|+++.           ...++.++.+|+++++++++++       
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------~~~~~~~~~~D~~~~~~~~~~~-------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRLDNPVGPLAELLPQLDGS-------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTEECCBSCHHHHGGGCCSC-------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------cCCCceEEeccccCHHHHHHhh-------
Confidence            367899999999999999999999998  99999998764           1235778888998776554332       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                       +|++||++|.   ...      +.++++..+++|+.++..+++.+.+    .+.+++|++||.....+  +...|+.
T Consensus        66 -~d~vi~~a~~---~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~  127 (215)
T 2a35_A           66 -IDTAFCCLGT---TIK------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNR  127 (215)
T ss_dssp             -CSEEEECCCC---CHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHH
T ss_pred             -hcEEEECeee---ccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHH
Confidence             8999999997   221      2456788999999999999988754    34469999999776532  2335543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.61  E-value=3.6e-15  Score=119.33  Aligned_cols=124  Identities=13%  Similarity=0.063  Sum_probs=93.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHc---CCeEEEEecChhhHHHHHHH--------------HHhhcCCcEEEEEeecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHE---GYTVAILARDLGRLSRFADE--------------IAREEKSQVFAIRIDCS   72 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~--------------l~~~~~~~~~~~~~D~~   72 (167)
                      ..+++++||||+|+||.+++++|+++   |++|++++|+++......+.              +......++.++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            46899999999999999999999999   89999999986644322211              11112458999999999


Q ss_pred             ------CHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceE
Q 031016           73 ------DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTI  146 (167)
Q Consensus        73 ------~~~~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i  146 (167)
                            +.+.++++++      ++|++||+||.   ...        +.++..+++|+.++..+++.+..    .+..+|
T Consensus       151 ~~~~gld~~~~~~~~~------~~D~Vih~Aa~---~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~~  209 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAE------TVDLIVDSAAM---VNA--------FPYHELFGPNVAGTAELIRIALT----TKLKPF  209 (478)
T ss_dssp             SGGGGCCHHHHHHHHH------HCCEEEECCSS---CSB--------SSCCEEHHHHHHHHHHHHHHHTS----SSCCCE
T ss_pred             CcccCCCHHHHHHHHc------CCCEEEECccc---cCC--------cCHHHHHHHHHHHHHHHHHHHHh----CCCCeE
Confidence                  5556666655      47999999998   322        23456789999999999998754    233599


Q ss_pred             EEecCCcc
Q 031016          147 IFTGCSAS  154 (167)
Q Consensus       147 v~iss~~~  154 (167)
                      |++||...
T Consensus       210 V~iSS~~v  217 (478)
T 4dqv_A          210 TYVSTADV  217 (478)
T ss_dssp             EEEEEGGG
T ss_pred             EEEeehhh
Confidence            99999654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.60  E-value=3.7e-15  Score=113.78  Aligned_cols=118  Identities=17%  Similarity=0.137  Sum_probs=90.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcCCcc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~i~   91 (167)
                      +++||||+|+||.+++++|+++ |++|++++|+.+...++.      ...++.++.+|++| .+.++++++      ++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~------~~d   69 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK------KCD   69 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH------HCS
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------cCCCeEEEeccccCcHHHHHhhcc------CCC
Confidence            6999999999999999999998 899999999876543221      23468899999998 455666665      379


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++||+||.   ....    ...++++..+++|+.++..+++.+.+    .+ .+||++||....
T Consensus        70 ~vih~A~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~  121 (345)
T 2bll_A           70 VVLPLVAI---ATPI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVY  121 (345)
T ss_dssp             EEEECBCC---CCHH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGG
T ss_pred             EEEEcccc---cCcc----chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHc
Confidence            99999997   3211    12356778999999999999888754    23 699999996543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.59  E-value=1.7e-15  Score=114.56  Aligned_cols=115  Identities=10%  Similarity=0.074  Sum_probs=91.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++||||+|+||.+++++|+++  |++|++++|+.....            .+.++.+|++|++++++++++    .++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~~d~~~~~~~~~~----~~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDVSNRDEIDRAVEK----YSID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCTTCHHHHHHHHHH----TTCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------CceEEEecCCCHHHHHHHHhh----cCCc
Confidence            3899999999999999999998  889999988654311            356788999999999888775    2699


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      ++||+|+.   ...     ...++++..+++|+.++..+++++.+    .+.+++|++||.....
T Consensus        65 ~vih~a~~---~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~  117 (317)
T 3ajr_A           65 AIFHLAGI---LSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFG  117 (317)
T ss_dssp             EEEECCCC---CHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCC
T ss_pred             EEEECCcc---cCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhC
Confidence            99999987   221     12356788999999999999998754    3446999999987644

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.59  E-value=2.5e-15  Score=115.69  Aligned_cols=123  Identities=10%  Similarity=0.039  Sum_probs=90.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.+++++||||+|+||.+++++|+++| ++|++++|+.....  .+.+   .  ++. +.+|+++++.++++++.. .++
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---~--~~~-~~~d~~~~~~~~~~~~~~-~~~  114 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---V--DLN-IADYMDKEDFLIQIMAGE-EFG  114 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---T--TSC-CSEEEEHHHHHHHHHTTC-CCS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---c--Cce-EeeecCcHHHHHHHHhhc-ccC
Confidence            356889999999999999999999999 89999998754321  0111   1  122 678999988887776531 235


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++|++||+||.   ...      +.++++..+++|+.++..+++++.+    .+. +||++||....
T Consensus       115 ~~d~Vih~A~~---~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~  167 (357)
T 2x6t_A          115 DVEAIFHEGAC---SST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATY  167 (357)
T ss_dssp             SCCEEEECCSC---CCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGG
T ss_pred             CCCEEEECCcc---cCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHh
Confidence            79999999997   322      2346788999999999999999875    234 99999998654

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.58  E-value=6.8e-15  Score=111.20  Aligned_cols=111  Identities=14%  Similarity=0.104  Sum_probs=87.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++++||||+|.||.+++++|+++|++|++++|++....  .+        ++.++.+|++ +++++++++      ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~--------~~~~~~~Dl~-~~~~~~~~~------~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN--------DYEYRVSDYT-LEDLINQLN------DVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTT------TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC--------ceEEEEcccc-HHHHHHhhc------CCC
Confidence            367999999999999999999999999999999843322  11        5788999999 888776655      689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++||+|+.   ....        +++..+++|+.++..+++++..    .+..++|++||...
T Consensus        65 ~Vih~a~~---~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~v  112 (311)
T 3m2p_A           65 AVVHLAAT---RGSQ--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISA  112 (311)
T ss_dssp             EEEECCCC---CCSS--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             EEEEcccc---CCCC--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHH
Confidence            99999997   3322        3456789999999998888753    33458999999554

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.57  E-value=2.7e-15  Score=112.09  Aligned_cols=104  Identities=13%  Similarity=0.217  Sum_probs=86.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|.||.+++++|+++|++|++++|.                      .+|++|++.+++++++.    ++|++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~----~~d~v   60 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEI----RPHII   60 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHH----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhc----CCCEE
Confidence            79999999999999999999999999999992                      26999999999888865    68999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ||+||.   ...    ....++++..+++|+.++..+++.+.+.    + .++|++||....
T Consensus        61 i~~a~~---~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy  110 (287)
T 3sc6_A           61 IHCAAY---TKV----DQAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVF  110 (287)
T ss_dssp             EECCCC---CCH----HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGS
T ss_pred             EECCcc---cCh----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhc
Confidence            999997   321    1122567889999999999999987543    2 489999997654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.57  E-value=7.7e-15  Score=111.15  Aligned_cols=109  Identities=16%  Similarity=0.132  Sum_probs=87.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++++||||+|.||.+++++|+++|++|+++.|+.                     .+|++|++++++++++.    ++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~----~~d   57 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE----RID   57 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH----CCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhc----CCC
Confidence            57899999999999999999999999998887752                     26999999998888754    689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++||+|+.   ...   .....++++..+++|+.++..+++++.+.    +..++|++||....
T Consensus        58 ~vih~a~~---~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~vy  111 (321)
T 1e6u_A           58 QVYLAAAK---VGG---IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIY  111 (321)
T ss_dssp             EEEECCCC---CCC---HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGS
T ss_pred             EEEEcCee---cCC---cchhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEccHHHc
Confidence            99999987   221   11234567788999999999999887642    34599999997653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.54  E-value=2.9e-15  Score=112.03  Aligned_cols=110  Identities=17%  Similarity=0.101  Sum_probs=85.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++++||| +|.||.+++++|+++|++|++++|+.+.           ...++.++.+|++|+++++++++     +++|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~-----~~~d   65 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP-----------MPAGVQTLIADVTRPDTLASIVH-----LRPE   65 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC-----------CCTTCCEEECCTTCGGGCTTGGG-----GCCS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc-----------cccCCceEEccCCChHHHHHhhc-----CCCC
Confidence            46799999 5999999999999999999999998654           23467889999999988876655     4699


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++||+|+.   .         .++++..+++|+.++..+++++.    +.+.+++|++||...
T Consensus        66 ~vih~a~~---~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~v  112 (286)
T 3gpi_A           66 ILVYCVAA---S---------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGV  112 (286)
T ss_dssp             EEEECHHH---H---------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGG
T ss_pred             EEEEeCCC---C---------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEE
Confidence            99999986   2         24567788999999998888875    344469999999754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.53  E-value=2.2e-14  Score=118.83  Aligned_cols=121  Identities=17%  Similarity=0.133  Sum_probs=93.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHH-HHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS-VREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   88 (167)
                      ++++++||||+|+||.+++++|+++ |++|++++|+.....++.      ...++.++.+|+++.++ ++++++      
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~------~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT------TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc------cCCceEEEECCCCCcHHHHHHhhc------
Confidence            5789999999999999999999998 899999999875532211      23468899999998765 555554      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++|++||+||.   ....    ...++++..+++|+.++..+++++.+.    + +++|++||....
T Consensus       382 ~~D~Vih~Aa~---~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~vy  436 (660)
T 1z7e_A          382 KCDVVLPLVAI---ATPI----EYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVY  436 (660)
T ss_dssp             HCSEEEECCCC---CCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGG
T ss_pred             CCCEEEECcee---cCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHHc
Confidence            47999999997   2211    123567889999999999998887643    3 699999997653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.53  E-value=2.2e-14  Score=107.93  Aligned_cols=119  Identities=9%  Similarity=0.045  Sum_probs=87.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      +++||||+|+||.+++++|+++| ++|++++|++....  .+.+..   ..   +.+|+++++.++++++.. ..+++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~---~~---~~~d~~~~~~~~~~~~~~-~~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD---LN---IADYMDKEDFLIQIMAGE-EFGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT---SC---CSEEEEHHHHHHHHHTTC-CCSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc---ce---eccccccHHHHHHHHhcc-ccCCCcE
Confidence            38999999999999999999999 89999998765321  111211   12   678999888877666521 0136999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +||+||.   ...      +.++++..+++|+.++..+++++.+.    +. ++|++||....
T Consensus        72 vi~~a~~---~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~  120 (310)
T 1eq2_A           72 IFHEGAC---SST------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATY  120 (310)
T ss_dssp             EEECCSC---CCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGG
T ss_pred             EEECccc---ccC------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHh
Confidence            9999997   322      23457788999999999999987643    44 99999997643

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.53  E-value=2.1e-15  Score=113.34  Aligned_cols=110  Identities=16%  Similarity=0.097  Sum_probs=86.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++|+++|||++||+|+++++.|+++|++|++++|+.++.+++.+.+....  ++.++.+|++++++++++++      
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--~~~~~~~D~~~~~~~~~~~~------  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAVK------  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHTT------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEecCCCHHHHHHHHH------
Confidence            3578999999999999999999999999999999999888888887775422  35677899999988876655      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCH-HHHHHHhhhhhHHHH
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISF-DSFQKSIAISSLGAF  128 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  128 (167)
                      .+|++|||+|.  .....+..+.+. ++|+.++++|+.+++
T Consensus       188 ~~DvlVn~ag~--g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAI--GLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCT--TCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCc--cccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            47999999985  122233333443 667778999998877

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.53  E-value=1.2e-14  Score=111.27  Aligned_cols=120  Identities=15%  Similarity=0.145  Sum_probs=87.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.+++++||||+|+||++++++|+++|++|++++|+.....+..+.+.  ...++.++.+|++++.           +.+
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----------~~~   91 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL-----------YIE   91 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC-----------CCC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh-----------hcC
Confidence            467899999999999999999999999999999986432111111110  1346889999998752           257


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +|++||+||.   ......    .++++..+++|+.++..+++++.+.    + .++|++||...
T Consensus        92 ~d~vih~A~~---~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v  144 (343)
T 2b69_A           92 VDQIYHLASP---ASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEV  144 (343)
T ss_dssp             CSEEEECCSC---CSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGG
T ss_pred             CCEEEECccc---cCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHH
Confidence            9999999997   221111    2346778999999999999987642    3 49999999654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.52  E-value=2.1e-13  Score=105.15  Aligned_cols=122  Identities=19%  Similarity=0.166  Sum_probs=86.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEee-cCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRID-CSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++||||+|+||++++++|+++|++|++++|+++...  .+.+..  ...+.++.+| ++|+++++++++      .
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~------~   73 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA--IPNVTLFQGPLLNNVPLMDTLFE------G   73 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT--STTEEEEESCCTTCHHHHHHHHT------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh--cCCcEEEECCccCCHHHHHHHHh------c
Confidence            3578999999999999999999999999999999876542  122221  2358888999 999999887765      4


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc-cccCCCCccccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA-SLNGIAGFSELC  165 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~-~~~~~~~~~~y~  165 (167)
                      +|.+|+|++.   ...               +.|..+     +.+++.+++.+ .++||++||.. +..+.+....|+
T Consensus        74 ~d~Vi~~a~~---~~~---------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~  128 (352)
T 1xgk_A           74 AHLAFINTTS---QAG---------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMW  128 (352)
T ss_dssp             CSEEEECCCS---TTS---------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             CCEEEEcCCC---CCc---------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHH
Confidence            7999999976   310               124333     44444455555 57999999986 333333334554

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.51  E-value=6.2e-14  Score=104.57  Aligned_cols=109  Identities=17%  Similarity=0.203  Sum_probs=85.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      |+++||||+|+||++++++|+++  |++|++++|++++..++.    .   ..+.++.+|++|+++++++++      .+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~d~~~l~~~~~------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D---QGVEVRHGDYNQPESLQKAFA------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H---TTCEEEECCTTCHHHHHHHTT------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h---cCCeEEEeccCCHHHHHHHHh------cC
Confidence            45899999999999999999999  999999999876654332    1   246788999999988877665      47


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      |++||+++.   ..       . +      ++|+.++..+++++.    +.+.++||++||....
T Consensus        68 d~vi~~a~~---~~-------~-~------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~  111 (287)
T 2jl1_A           68 SKLLFISGP---HY-------D-N------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAE  111 (287)
T ss_dssp             SEEEECCCC---CS-------C-H------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGG
T ss_pred             CEEEEcCCC---Cc-------C-c------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCC
Confidence            999999986   21       1 1      578888888877764    3344699999997653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.51  E-value=2.4e-14  Score=107.38  Aligned_cols=107  Identities=13%  Similarity=0.073  Sum_probs=86.1

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++||||+|.||.+++++|+ +|++|++++|++.                  .+.+|++|+++++++++..    ++|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~----~~d~v   58 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKL----RPDVI   58 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHH----CCSEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhc----CCCEE
Confidence            58999999999999999999 8999999998752                  2468999999998888754    68999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ||+||.   ....    .+.++++..+++|+.++..+++++.+    .+ .++|++||....
T Consensus        59 ih~a~~---~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy  108 (299)
T 1n2s_A           59 VNAAAH---TAVD----KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVF  108 (299)
T ss_dssp             EECCCC---CCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGS
T ss_pred             EECccc---CCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEE
Confidence            999987   2211    12346778899999999999998753    22 489999997653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.49  E-value=9.1e-14  Score=104.52  Aligned_cols=114  Identities=11%  Similarity=-0.073  Sum_probs=84.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++++++++||||+|.||++++++|+++|+      +...            ....+..+.+|++|++.++++++..    
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------------~~~~~~~~~~D~~d~~~~~~~~~~~----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------------DWVFVSSKDADLTDTAQTRALFEKV----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------------EEEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------------cccccCceecccCCHHHHHHHHhhc----
Confidence            34678999999999999999999999997      1100            1112334468999999999888753    


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++|++||+|+.   ....   ..+.++....+++|+.++..+++.+...    +..++|++||...
T Consensus        61 ~~d~Vih~A~~---~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~v~~SS~~v  116 (319)
T 4b8w_A           61 QPTHVIHLAAM---VGGL---FRNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKVVSCLSTCI  116 (319)
T ss_dssp             CCSEEEECCCC---CCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGG
T ss_pred             CCCEEEECcee---cccc---cccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEEcchhh
Confidence            69999999987   2211   1123456778999999999999887533    3459999999754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.48  E-value=7e-14  Score=112.52  Aligned_cols=122  Identities=10%  Similarity=0.048  Sum_probs=92.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh---HHHHHHHHHh--------hcCCcEEEEEeecCCHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR---LSRFADEIAR--------EEKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~---~~~~~~~l~~--------~~~~~~~~~~~D~~~~~~~~~   79 (167)
                      ..++++||||+|.||.+++++|.++|++|++++|+...   ..++.+.++.        ....++.++.+|+++++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            45889999999999999999999999999999998763   3333333322        13568999999999977776 


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           80 AFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        80 ~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                            ...++|++||+|+.   ..       ..+.++..+++|+.++..+++.+.+     ...++|++||...
T Consensus       228 ------~~~~~D~Vih~Aa~---~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v  281 (508)
T 4f6l_B          228 ------LPENMDTIIHAGAR---TD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV  281 (508)
T ss_dssp             ------CSSCCSEEEECCCC------------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT
T ss_pred             ------CccCCCEEEECCce---ec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh
Confidence                  13689999999997   31       1245678899999999999998865     2369999999876

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.45  E-value=1e-13  Score=106.60  Aligned_cols=117  Identities=19%  Similarity=0.160  Sum_probs=90.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC-----CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG-----YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +++++||||+|.||.+++++|+++|     ++|++++|++....     +   ...++.++.+|++|+++++++++..  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~---~~~~~~~~~~Dl~d~~~~~~~~~~~--   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H---EDNPINYVQCDISDPDDSQAKLSPL--   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C---CSSCCEEEECCTTSHHHHHHHHTTC--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c---ccCceEEEEeecCCHHHHHHHHhcC--
Confidence            4679999999999999999999999     99999999765422     0   2346788999999999887776532  


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEE-------EecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTII-------FTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv-------~iss~~  153 (167)
                       +++|++||+||.   ..         ++++..+++|+.++..+++++.+...  +..++|       ++||..
T Consensus        71 -~~~d~vih~a~~---~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~  129 (364)
T 2v6g_A           71 -TDVTHVFYVTWA---NR---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFE  129 (364)
T ss_dssp             -TTCCEEEECCCC---CC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGG
T ss_pred             -CCCCEEEECCCC---Cc---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechh
Confidence             349999999997   31         24677899999999999999876421  123676       677764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.43  E-value=9.1e-13  Score=98.45  Aligned_cols=107  Identities=19%  Similarity=0.227  Sum_probs=81.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      +++||||+|+||++++++|.++ |++|++++|++++..++       ....+.++.+|++|+++++++++      .+|.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~~~~v~~~~~D~~d~~~l~~~~~------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------WRGKVSVRQLDYFNQESMVEAFK------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------GBTTBEEEECCTTCHHHHHHHTT------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------hhCCCEEEEcCCCCHHHHHHHHh------CCCE
Confidence            3899999999999999999998 99999999987754321       23468899999999998887665      5899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +||++|.   ....              ..|+.+.    +.+++.+++.+.++||++||...
T Consensus        69 vi~~a~~---~~~~--------------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~  109 (289)
T 3e48_A           69 VVFIPSI---IHPS--------------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYAD  109 (289)
T ss_dssp             EEECCCC---CCSH--------------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCC
T ss_pred             EEEeCCC---Cccc--------------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCC
Confidence            9999987   2210              1244444    44555556666679999999654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.43  E-value=3.8e-13  Score=100.16  Aligned_cols=106  Identities=15%  Similarity=0.140  Sum_probs=76.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++||||+|+||++++++|+++  |++|++++|++++.+++.    .   ..+.++.+|++|+++++++++      .+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~---~~~~~~~~D~~d~~~~~~~~~------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A---QGITVRQADYGDEAALTSALQ------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H---TTCEEEECCTTCHHHHHHHTT------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c---CCCeEEEcCCCCHHHHHHHHh------CCC
Confidence            3799999999999999999998  999999999876544322    1   246788999999988877665      579


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++||+++.   ...                .|+.++..+++++    .+.+.++||++||....
T Consensus        68 ~vi~~a~~---~~~----------------~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~  108 (286)
T 2zcu_A           68 KLLLISSS---EVG----------------QRAPQHRNVINAA----KAAGVKFIAYTSLLHAD  108 (286)
T ss_dssp             EEEECC---------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT
T ss_pred             EEEEeCCC---Cch----------------HHHHHHHHHHHHH----HHcCCCEEEEECCCCCC
Confidence            99999986   210                2555555555554    44445699999997764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.41  E-value=2.5e-12  Score=96.54  Aligned_cols=112  Identities=14%  Similarity=0.207  Sum_probs=80.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++++||||+|+||++++++|+++| ++|++++|+++....  +.+..   ..+.++.+|++|+++++++++      .+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---~~~~~~~~D~~d~~~l~~~~~------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---QGAEVVQGDQDDQVIMELALN------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---TTCEEEECCTTCHHHHHHHHT------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---CCCEEEEecCCCHHHHHHHHh------cC
Confidence            5789999999999999999999999 999999998765421  22222   247788999999999887765      48


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      |.+||+++.   ....            ..+.|+.+    .+.+++.+++.+.++||++|+..
T Consensus        74 d~vi~~a~~---~~~~------------~~~~~~~~----~~~~~~aa~~~gv~~iv~~S~~~  117 (299)
T 2wm3_A           74 YATFIVTNY---WESC------------SQEQEVKQ----GKLLADLARRLGLHYVVYSGLEN  117 (299)
T ss_dssp             SEEEECCCH---HHHT------------CHHHHHHH----HHHHHHHHHHHTCSEEEECCCCC
T ss_pred             CEEEEeCCC---Cccc------------cchHHHHH----HHHHHHHHHHcCCCEEEEEcCcc
Confidence            999999986   2110            12234443    44555555565667999966543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.41  E-value=1.1e-12  Score=100.59  Aligned_cols=105  Identities=14%  Similarity=0.119  Sum_probs=77.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh----hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL----GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +..++++||||+|.||+++++.|+++|++|++++|++    ++.. ..+.+   ....+.++.+|++|++++.+++++. 
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l---~~~~v~~~~~Dl~d~~~l~~~~~~~-   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKAL---EDKGAIIVYGLINEQEAMEKILKEH-   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHH---HHTTCEEEECCTTCHHHHHHHHHHT-
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHH---HhCCcEEEEeecCCHHHHHHHHhhC-
Confidence            3467899999999999999999999999999999976    2222 22223   2346889999999999999888753 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEE
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIF  148 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~  148 (167)
                         ++|++||+++.   .                   |+.+...+++++..    .+ -.++|+
T Consensus        83 ---~~d~Vi~~a~~---~-------------------n~~~~~~l~~aa~~----~g~v~~~v~  117 (346)
T 3i6i_A           83 ---EIDIVVSTVGG---E-------------------SILDQIALVKAMKA----VGTIKRFLP  117 (346)
T ss_dssp             ---TCCEEEECCCG---G-------------------GGGGHHHHHHHHHH----HCCCSEEEC
T ss_pred             ---CCCEEEECCch---h-------------------hHHHHHHHHHHHHH----cCCceEEee
Confidence               68999999986   1                   66666666666543    33 346664

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.40  E-value=2.6e-12  Score=96.56  Aligned_cols=78  Identities=19%  Similarity=0.240  Sum_probs=63.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-------hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-------GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      +++++||||+|+||++++++|+++|++|++++|++       ++.+.+ +.+..   ..+.++.+|++|++++.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~---~~v~~v~~D~~d~~~l~~~~~--   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS---LGVILLEGDINDHETLVKAIK--   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH---TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh---CCCEEEEeCCCCHHHHHHHHh--
Confidence            46799999999999999999999999999999986       333332 23322   347789999999998877765  


Q ss_pred             HhcCCccEEEEcCCC
Q 031016           85 LSLGFVEVLVYNAYQ   99 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~   99 (167)
                          .+|++||+++.
T Consensus        76 ----~~d~vi~~a~~   86 (307)
T 2gas_A           76 ----QVDIVICAAGR   86 (307)
T ss_dssp             ----TCSEEEECSSS
T ss_pred             ----CCCEEEECCcc
Confidence                58999999987

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.32  E-value=1.2e-13  Score=104.39  Aligned_cols=117  Identities=14%  Similarity=-0.017  Sum_probs=75.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      ++++++||||+|.||.+++++|+++|++|++++|+........+.+... ...++.++.+|++                +
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------~   69 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------D   69 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------T
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------c
Confidence            4688999999999999999999999999999998764100000000000 0112223333333                6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|++||+|+.   .......    ++....++ |+.++..+++++...    +..+||++||....
T Consensus        70 ~d~vi~~a~~---~~~~~~~----~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~  123 (321)
T 3vps_A           70 VRLVYHLASH---KSVPRSF----KQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVY  123 (321)
T ss_dssp             EEEEEECCCC---CCHHHHT----TSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGG
T ss_pred             CCEEEECCcc---CChHHHH----hCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHh
Confidence            8999999997   3221111    12234456 999999888887543    33599999997643

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.32  E-value=1.6e-11  Score=92.98  Aligned_cols=79  Identities=15%  Similarity=0.119  Sum_probs=62.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-h----hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-G----RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +++++||||+|+||.+++++|+++|++|++++|++ .    ...+..+.+.   ...+.++.+|++|+++++++++    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~---~~~v~~v~~D~~d~~~l~~a~~----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR---SMGVTIIEGEMEEHEKMVSVLK----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH---HTTCEEEECCTTCHHHHHHHHT----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh---cCCcEEEEecCCCHHHHHHHHc----
Confidence            46699999999999999999999999999999986 2    1122222232   2357889999999998887776    


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                        .+|++||+++.
T Consensus        77 --~~d~vi~~a~~   87 (321)
T 3c1o_A           77 --QVDIVISALPF   87 (321)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --CCCEEEECCCc
Confidence              48999999987

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.32  E-value=6.8e-12  Score=101.22  Aligned_cols=111  Identities=18%  Similarity=0.020  Sum_probs=82.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      ++++|||||+|.||.++++.|+++|++|++++|+....               ..+.+|+.+..  .+      .+.++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------~~v~~d~~~~~--~~------~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------GKRFWDPLNPA--SD------LLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------TCEECCTTSCC--TT------TTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------cceeecccchh--HH------hcCCCC
Confidence            56899999999999999999999999999999986532               11456776431  11      235799


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++||+||.   ....   ..+.+.++..+++|+.++..+++.+.   .+.+..+||++||...
T Consensus       204 ~Vih~A~~---~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~v  257 (516)
T 3oh8_A          204 VLVHLAGE---PIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGF  257 (516)
T ss_dssp             EEEECCCC-----------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGG
T ss_pred             EEEECCCC---cccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceE
Confidence            99999997   2222   44567788899999999999999744   2334469999998654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.32  E-value=1.2e-11  Score=93.04  Aligned_cols=82  Identities=21%  Similarity=0.206  Sum_probs=62.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH--HHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL--SRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .++++||||+|.+|++++++|+++|++|++++|+....  .+..+.+.......+.++.+|++|++++.++++      .
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~------~   77 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------N   77 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc------C
Confidence            36699999999999999999999999999999974321  111111211123467889999999999888776      4


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++||+++.
T Consensus        78 ~d~vi~~a~~   87 (308)
T 1qyc_A           78 VDVVISTVGS   87 (308)
T ss_dssp             CSEEEECCCG
T ss_pred             CCEEEECCcc
Confidence            8999999986

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.31  E-value=1.4e-11  Score=93.27  Aligned_cols=79  Identities=13%  Similarity=0.167  Sum_probs=63.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .++++||||+|+||.+++++|+++|++|++++|+++...+..+.+..   ..+.++.+|++|+++++++++      .+|
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~a~~------~~d   81 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS---LGAIIVKGELDEHEKLVELMK------KVD   81 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH---TTCEEEECCTTCHHHHHHHHT------TCS
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc---CCCEEEEecCCCHHHHHHHHc------CCC
Confidence            36799999999999999999999999999999987522222222322   347789999999998887776      489


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      ++||+++.
T Consensus        82 ~vi~~a~~   89 (318)
T 2r6j_A           82 VVISALAF   89 (318)
T ss_dssp             EEEECCCG
T ss_pred             EEEECCch
Confidence            99999986

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.29  E-value=2.5e-11  Score=91.46  Aligned_cols=78  Identities=17%  Similarity=0.161  Sum_probs=62.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-----hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-----RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .++++||||+|.||++++++|+++|++|++++|+..     +.+.+ +.+   ....+.++.+|++|+++++++++    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~---~~~~~~~~~~D~~d~~~l~~~~~----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYF---KQLGAKLIEASLDDHQRLVDALK----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHH---HTTTCEEECCCSSCHHHHHHHHT----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHH---HhCCeEEEeCCCCCHHHHHHHHh----
Confidence            356999999999999999999999999999999843     22222 222   23467889999999998887765    


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                        .+|++||+++.
T Consensus        76 --~~d~vi~~a~~   86 (313)
T 1qyd_A           76 --QVDVVISALAG   86 (313)
T ss_dssp             --TCSEEEECCCC
T ss_pred             --CCCEEEECCcc
Confidence              58999999987

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.19  E-value=3e-10  Score=84.54  Aligned_cols=69  Identities=16%  Similarity=0.183  Sum_probs=57.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .++++|||+ |.||.+++++|+++|++|++++|++.....+..       ..+.++.+|++|.+           ..++|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-----------~~~~d   65 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-----------LDGVT   65 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-----------CTTCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-----------cCCCC
Confidence            367999998 999999999999999999999999876554321       35889999999843           25789


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      ++||+|+.
T Consensus        66 ~vi~~a~~   73 (286)
T 3ius_A           66 HLLISTAP   73 (286)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999987

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.16  E-value=1.2e-10  Score=84.16  Aligned_cols=76  Identities=18%  Similarity=0.132  Sum_probs=58.0

Q ss_pred             CCCCcEEEEEcC----------------CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC
Q 031016            9 SSCRGIAAIVGV----------------GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS   72 (167)
Q Consensus         9 ~~~~~~~lItGa----------------~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~   72 (167)
                      .+.+|+++||||                +|++|.++|++|+++|++|++++++.. ++         ....+  -.+|++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~g~--~~~dv~   72 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPPFV--KRVDVM   72 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCTTE--EEEECC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCCCC--eEEccC
Confidence            367999999999                689999999999999999999987642 10         11112  246888


Q ss_pred             CHHHHHHHHHHHH-hcCCccEEEEcCCC
Q 031016           73 DSRSVREAFEGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        73 ~~~~~~~~~~~~~-~~~~i~~lv~~ag~   99 (167)
                      +.+++   ++.+. .++++|++|+|||+
T Consensus        73 ~~~~~---~~~v~~~~~~~Dili~~Aav   97 (226)
T 1u7z_A           73 TALEM---EAAVNASVQQQNIFIGCAAV   97 (226)
T ss_dssp             SHHHH---HHHHHHHGGGCSEEEECCBC
T ss_pred             cHHHH---HHHHHHhcCCCCEEEECCcc
Confidence            76554   45555 67899999999998

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.13  E-value=4.5e-11  Score=92.29  Aligned_cols=95  Identities=11%  Similarity=0.058  Sum_probs=74.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      +++||||+|.||++++++|+++|+ +|+..+|+                          +|+++++++++.      +|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~~------~d~   49 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALLK------ADF   49 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHHH------CSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhcc------CCE
Confidence            489999999999999999999998 77766553                          677888877773      799


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCCccc
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASL  155 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~  155 (167)
                      +||+||.   ...        +++...+++|+.++..+++++.    +.+. .++|++||....
T Consensus        50 Vih~a~~---~~~--------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~   98 (369)
T 3st7_A           50 IVHLAGV---NRP--------EHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQAT   98 (369)
T ss_dssp             EEECCCS---BCT--------TCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGG
T ss_pred             EEECCcC---CCC--------CCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhc
Confidence            9999997   322        2345578899999988888864    3332 389999997754

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.02  E-value=6.7e-09  Score=77.77  Aligned_cols=109  Identities=12%  Similarity=0.078  Sum_probs=75.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      +|||||+|-||.+++++|.++|++|+++.|++..             .++.   .|     ...   .+  ....+|.+|
T Consensus         3 ILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------~~~~---~~-----~~~---~~--~l~~~d~vi   56 (298)
T 4b4o_A            3 VLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------GRIT---WD-----ELA---AS--GLPSCDAAV   56 (298)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------TEEE---HH-----HHH---HH--CCCSCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------Ceee---cc-----hhh---Hh--hccCCCEEE
Confidence            8999999999999999999999999999997532             1111   11     111   11  246799999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      |.||.   ....+....+.+..+..++.|+.++-.+.+.+...-  .+...+|+.||...
T Consensus        57 hla~~---~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~--~~~~~~i~~Ss~~v  111 (298)
T 4b4o_A           57 NLAGE---NILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP--QPPKAWVLVTGVAY  111 (298)
T ss_dssp             ECCCC---CSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS--SCCSEEEEEEEGGG
T ss_pred             EeccC---cccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC--CCceEEEEEeeeee
Confidence            99986   333444456777788889999999888777654321  12235677666543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.98  E-value=3.5e-09  Score=68.37  Aligned_cols=74  Identities=22%  Similarity=0.324  Sum_probs=60.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +++++|+|+ |++|..+++.|.++| ++|++++|++++.+.+.       ...+..+.+|+++++++++++.      .+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~------~~   70 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-------RMGVATKQVDAKDEAGLAKALG------GF   70 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-------TTTCEEEECCTTCHHHHHHHTT------TC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-------hCCCcEEEecCCCHHHHHHHHc------CC
Confidence            578999999 999999999999999 89999999987765543       1245678889999887776554      68


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|++++.
T Consensus        71 d~vi~~~~~   79 (118)
T 3ic5_A           71 DAVISAAPF   79 (118)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCc
Confidence            999999965

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.97  E-value=5.4e-09  Score=82.01  Aligned_cols=82  Identities=15%  Similarity=0.225  Sum_probs=70.5

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcC---CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEG---YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.++|+|+ |++|+.+++.|+++|   .+|++.+|+.++++++.+.+....+.++..+.+|+++.+++++++++.    +
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----~   76 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----K   76 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH----C
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh----C
Confidence            46899999 899999999999998   489999999999988888776523346888999999999999988875    6


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++||+++.
T Consensus        77 ~DvVin~ag~   86 (405)
T 4ina_A           77 PQIVLNIALP   86 (405)
T ss_dssp             CSEEEECSCG
T ss_pred             CCEEEECCCc
Confidence            8999999986

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.97  E-value=6.8e-10  Score=76.18  Aligned_cols=75  Identities=15%  Similarity=0.071  Sum_probs=62.1

Q ss_pred             chhHHHHHHHHHcCCeEEEEecChhhHH---HHHHHHHhhcCCcEEEEEeecCCH--HHHHHHHHHHH-hcCCccEEEEc
Q 031016           23 NLGRSIARKFAHEGYTVAILARDLGRLS---RFADEIAREEKSQVFAIRIDCSDS--RSVREAFEGVL-SLGFVEVLVYN   96 (167)
Q Consensus        23 ~iG~~~a~~l~~~g~~v~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~-~~~~i~~lv~~   96 (167)
                      -++.+.++.|+++|++|++..|++....   +..+.++. .+.+...+.+|++++  ++++++++.+. ++|+ |+||||
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            4779999999999999999887654322   23444554 677889999999999  99999999998 7899 999999


Q ss_pred             CCC
Q 031016           97 AYQ   99 (167)
Q Consensus        97 ag~   99 (167)
                      +|+
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            997

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.96  E-value=1.8e-09  Score=78.31  Aligned_cols=76  Identities=11%  Similarity=0.142  Sum_probs=55.4

Q ss_pred             CCcEEEEEcC----------------CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH
Q 031016           11 CRGIAAIVGV----------------GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus        11 ~~~~~lItGa----------------~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .||+++||||                +|++|.++|+.++++|++|++++|+.....       . .+..+..  .|+.+ 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~-~~~~~~~--~~v~s-   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------E-PHPNLSI--REITN-   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------C-CCTTEEE--EECCS-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------c-CCCCeEE--EEHhH-
Confidence            5899999999                788999999999999999999998753110       0 1122332  35544 


Q ss_pred             HHHHHHHHHHH-hcCCccEEEEcCCC
Q 031016           75 RSVREAFEGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        75 ~~~~~~~~~~~-~~~~i~~lv~~ag~   99 (167)
                        +++.++.+. .++++|++|+||++
T Consensus        71 --~~em~~~v~~~~~~~Dili~aAAv   94 (232)
T 2gk4_A           71 --TKDLLIEMQERVQDYQVLIHSMAV   94 (232)
T ss_dssp             --HHHHHHHHHHHGGGCSEEEECSBC
T ss_pred             --HHHHHHHHHHhcCCCCEEEEcCcc
Confidence              444555555 57889999999997

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.81  E-value=2e-08  Score=77.06  Aligned_cols=104  Identities=16%  Similarity=0.138  Sum_probs=74.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+... .    .+.+   ..+|.++.+++.+.+.++... ++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~----~g~~---~~~d~~~~~~~~~~~~~~~~~-~~  239 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S----IGGE---VFIDFTKEKDIVGAVLKATDG-GA  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H----TTCC---EEEETTTCSCHHHHHHHHHTS-CE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H----cCCc---eEEecCccHhHHHHHHHHhCC-CC
Confidence            5789999999999999999999999999999999887764332 2    3433   224888655666666665422 79


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      |++|+++|.   .          +               ..+.+++.+++  .|++|++++..
T Consensus       240 D~vi~~~g~---~----------~---------------~~~~~~~~l~~--~G~iv~~g~~~  272 (347)
T 2hcy_A          240 HGVINVSVS---E----------A---------------AIEASTRYVRA--NGTTVLVGMPA  272 (347)
T ss_dssp             EEEEECSSC---H----------H---------------HHHHHTTSEEE--EEEEEECCCCT
T ss_pred             CEEEECCCc---H----------H---------------HHHHHHHHHhc--CCEEEEEeCCC
Confidence            999999985   1          1               23455555544  47999987654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.81  E-value=1.9e-08  Score=71.03  Aligned_cols=80  Identities=13%  Similarity=-0.050  Sum_probs=58.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++||+|.++++.+...|++|+++++++++.+...    . .+.+.   .+|.++++..+.+.+.. ..+++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~-~g~~~---~~d~~~~~~~~~~~~~~-~~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-LGVEY---VGDSRSVDFADEILELT-DGYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-TCCSE---EEETTCSTHHHHHHHHT-TTCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-cCCCE---EeeCCcHHHHHHHHHHh-CCCCC
Confidence            5789999999999999999999999999999999877654432    2 34332   24887765554444332 12369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       109 D~vi~~~g~  117 (198)
T 1pqw_A          109 DVVLNSLAG  117 (198)
T ss_dssp             EEEEECCCT
T ss_pred             eEEEECCch
Confidence            999999974

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.79  E-value=1.7e-11  Score=97.48  Aligned_cols=131  Identities=15%  Similarity=0.157  Sum_probs=75.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHH------hh-cCCcEEEEEeecCCHHHHHH-H
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA------RE-EKSQVFAIRIDCSDSRSVRE-A   80 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~------~~-~~~~~~~~~~D~~~~~~~~~-~   80 (167)
                      .+.+|+++|+|++ +||+++++.|...|++|++.++++....+......      .. ...++.+.  .....+-+.+ .
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~--atG~~~vl~~e~  338 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVT--TTGNKDIIMLDH  338 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEE--CSSCSCSBCHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEe--CCCChhhhhHHH
Confidence            4679999999987 99999999999999999999998776554433210      00 11122111  1111111111 1


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHH-------hhhhhHHHHHHH-HHHHHhhHhcCCceEEEecCC
Q 031016           81 FEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKS-------IAISSLGAFLCA-QQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~l~-~~~~~~~~~~~~g~iv~iss~  152 (167)
                      +.    .-+.+.+|+|+|.   .    ..+.+.+.++..       +..|+...+... +..++.+.+   |+|||+||.
T Consensus       339 l~----~mk~gaiVvNaG~---~----~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLae---GRIVNlsS~  404 (488)
T 3ond_A          339 MK----KMKNNAIVCNIGH---F----DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAE---GRLMNLGCA  404 (488)
T ss_dssp             HT----TSCTTEEEEESSS---T----TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEGG---GSCHHHHHS
T ss_pred             HH----hcCCCeEEEEcCC---C----CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHcC---CcEEEEecC
Confidence            11    1245777888886   2    234556666654       233333322222 233334433   899999998


Q ss_pred             cccc
Q 031016          153 ASLN  156 (167)
Q Consensus       153 ~~~~  156 (167)
                      .+..
T Consensus       405 ~G~p  408 (488)
T 3ond_A          405 TGHP  408 (488)
T ss_dssp             CCSC
T ss_pred             cccC
Confidence            7653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.78  E-value=1.7e-08  Score=76.94  Aligned_cols=119  Identities=10%  Similarity=0.062  Sum_probs=79.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .++||||+|.||..++..|+++|+       +|+++++++  +..+.....+.. ....+  + .|+.+.++..+.++  
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-~~~~~--~-~di~~~~~~~~a~~--   79 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-CAFPL--L-AGLEATDDPKVAFK--   79 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTT--E-EEEEEESCHHHHTT--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-ccccc--c-CCeEeccChHHHhC--
Confidence            599999999999999999999986       799998864  222322223322 11122  2 46655444443333  


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                          ..|++||.||.   .. .+  .   ++..+.++.|+.++..+++.+...-  ...++++++|+..
T Consensus        80 ----~~D~Vih~Ag~---~~-~~--~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~  133 (327)
T 1y7t_A           80 ----DADYALLVGAA---PR-KA--G---MERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPA  133 (327)
T ss_dssp             ----TCSEEEECCCC---CC-CT--T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSH
T ss_pred             ----CCCEEEECCCc---CC-CC--C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCch
Confidence                58999999997   22 22  1   2345679999999999988876542  1235888888754

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.76  E-value=2.2e-08  Score=79.53  Aligned_cols=77  Identities=12%  Similarity=0.182  Sum_probs=61.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ++++++|+| +|++|+++++.|+++|++|++.+|+.++.+++.+.    . ..+..+.+|+++.+++++++.      .+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~-~~~~~~~~Dv~d~~~l~~~l~------~~   69 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----V-QHSTPISLDVNDDAALDAEVA------KH   69 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----C-TTEEEEECCTTCHHHHHHHHT------TS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----c-CCceEEEeecCCHHHHHHHHc------CC
Confidence            367899998 79999999999999999999999987765544322    1 236778899999988776654      68


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++||+++.
T Consensus        70 DvVIn~a~~   78 (450)
T 1ff9_A           70 DLVISLIPY   78 (450)
T ss_dssp             SEEEECCC-
T ss_pred             cEEEECCcc
Confidence            999999986

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.75  E-value=3.7e-08  Score=75.05  Aligned_cols=80  Identities=10%  Similarity=0.050  Sum_probs=60.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|+||..+++.+...|++|+++++++++++.+ +.    .+.+   ..+|.++.+++.+.+.+... +++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~----~g~~---~~~d~~~~~~~~~~~~~~~~-~~~  215 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQ----IGFD---AAFNYKTVNSLEEALKKASP-DGY  215 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH----TTCS---EEEETTSCSCHHHHHHHHCT-TCE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hh----cCCc---EEEecCCHHHHHHHHHHHhC-CCC
Confidence            579999999999999999999999999999999988776554 32    3333   23588774445555544432 579


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1v3u_A          216 DCYFDNVGG  224 (333)
T ss_dssp             EEEEESSCH
T ss_pred             eEEEECCCh
Confidence            999999984

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.75  E-value=5.8e-08  Score=75.25  Aligned_cols=108  Identities=17%  Similarity=0.177  Sum_probs=74.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.+++++|+|+ |++|+.+++.+...|++|++++|++++++...+.    .+..   +.+|.++.+++++.+.      
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~----~g~~---~~~~~~~~~~l~~~~~------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV----FGGR---VITLTATEANIKKSVQ------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TTTS---EEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCce---EEEecCCHHHHHHHHh------
Confidence            357899999999 9999999999999999999999998776655432    3333   4567888887776665      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ..|++|++++.   ....                   .+..+.+..++.|++  .|.||++++..+
T Consensus       229 ~~DvVi~~~g~---~~~~-------------------~~~li~~~~l~~mk~--gg~iV~v~~~~g  270 (369)
T 2eez_A          229 HADLLIGAVLV---PGAK-------------------APKLVTRDMLSLMKE--GAVIVDVAVDQG  270 (369)
T ss_dssp             HCSEEEECCC-----------------------------CCSCHHHHTTSCT--TCEEEECC----
T ss_pred             CCCEEEECCCC---Cccc-------------------cchhHHHHHHHhhcC--CCEEEEEecCCC
Confidence            47999999986   2100                   012234556667743  479999987653

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.74  E-value=3.4e-09  Score=85.69  Aligned_cols=102  Identities=14%  Similarity=0.157  Sum_probs=68.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.+|+++|||+ ||+|+++++.|+++|++|++.+|+.++++++.+.+    +.++.    ++.+   +    ++. ..+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~----~~~~~----~~~d---l----~~~-~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI----GGKAL----SLTD---L----DNY-HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT----TC-CE----ETTT---T----TTC---C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCcee----eHHH---h----hhc-ccc
Confidence            356889999999 59999999999999999999999988887776554    22221    2222   1    110 124


Q ss_pred             CccEEEEcCCCCCCCC---CCCCCCCCHHHHHHHhhhhhHHHH
Q 031016           89 FVEVLVYNAYQPVSWQ---PTNFTEISFDSFQKSIAISSLGAF  128 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~  128 (167)
                      .+|++|||+|... .+   ..++.+.+.++|..++++|+.+..
T Consensus       424 ~~DilVN~agvg~-~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          424 DGMVLANTTSMGM-QPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             CSEEEEECSSTTC-TTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             CceEEEECCCCCC-CCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            5899999999711 11   245666777889999999998653

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.66  E-value=1.6e-08  Score=75.82  Aligned_cols=77  Identities=19%  Similarity=0.255  Sum_probs=58.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +.+|+++|+|++ |+|+++++.|+++| +|++.+|+.++++++.+.+....+... .+.+|+++.          . ..+
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT----------TCCCT
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH----------HHhhC
Confidence            568999999997 99999999999999 999999998888888777654111010 122455441          3 457


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|++|||+|.
T Consensus       193 ~~DilVn~ag~  203 (287)
T 1nvt_A          193 GVDIIINATPI  203 (287)
T ss_dssp             TCCEEEECSCT
T ss_pred             CCCEEEECCCC
Confidence            89999999997

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.60  E-value=8.2e-07  Score=67.32  Aligned_cols=82  Identities=13%  Similarity=0.183  Sum_probs=63.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC---hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD---LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+++|+++|+|+ ||+|++++..|++.|+ +|++.+|+   .++.+++.+.+....+.++.  ..++.+.+++.+.+.  
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~--~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQ--LFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHHH--
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceE--EeccchHHHHHhhhc--
Confidence            457899999998 7999999999999999 89999999   78888888887653443333  446767666655444  


Q ss_pred             HhcCCccEEEEcCCC
Q 031016           85 LSLGFVEVLVYNAYQ   99 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~   99 (167)
                          ..|++||+...
T Consensus       226 ----~aDiIINaTp~  236 (315)
T 3tnl_A          226 ----ESVIFTNATGV  236 (315)
T ss_dssp             ----TCSEEEECSST
T ss_pred             ----CCCEEEECccC
Confidence                57999998754

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.58  E-value=3.1e-07  Score=69.97  Aligned_cols=80  Identities=14%  Similarity=-0.033  Sum_probs=59.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|..+++.+...|++|+++++++++++.+.+     .+.+.   .+|.++++..+++.+.. ...++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-----~g~~~---~~d~~~~~~~~~i~~~~-~~~~~  215 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-----LGCHH---TINYSTQDFAEVVREIT-GGKGV  215 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HTCSE---EEETTTSCHHHHHHHHH-TTCCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----cCCCE---EEECCCHHHHHHHHHHh-CCCCC
Confidence            47899999999999999999999999999999998877655432     23332   24777765555444332 12369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1wly_A          216 DVVYDSIGK  224 (333)
T ss_dssp             EEEEECSCT
T ss_pred             eEEEECCcH
Confidence            999999985

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.56  E-value=2.4e-07  Score=70.30  Aligned_cols=80  Identities=9%  Similarity=-0.125  Sum_probs=59.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|..+++.+...|++|+++++++++++.+.+     .+.+.   .+|.++++..+++.+... ..++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-----~g~~~---~~~~~~~~~~~~~~~~~~-~~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-----AGAWQ---VINYREEDLVERLKEITG-GKKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-----HTCSE---EEETTTSCHHHHHHHHTT-TCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----cCCCE---EEECCCccHHHHHHHHhC-CCCc
Confidence            47999999999999999999999999999999998877655433     23332   247777665555444321 2369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       211 D~vi~~~g~  219 (327)
T 1qor_A          211 RVVYDSVGR  219 (327)
T ss_dssp             EEEEECSCG
T ss_pred             eEEEECCch
Confidence            999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.55  E-value=3.5e-07  Score=72.90  Aligned_cols=77  Identities=14%  Similarity=0.186  Sum_probs=61.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.++.++|+|+ |++|+++++.|++. |++|++.+|+.++++++.+.    .  .+..+.+|+++.+++.+++.      
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~--~~~~~~~D~~d~~~l~~~l~------   87 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S--GSKAISLDVTDDSALDKVLA------   87 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G--TCEEEECCTTCHHHHHHHHH------
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c--CCcEEEEecCCHHHHHHHHc------
Confidence            46788999998 99999999999998 77999999998777665432    1  34566789999888776665      


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++||+++.
T Consensus        88 ~~DvVIn~tp~   98 (467)
T 2axq_A           88 DNDVVISLIPY   98 (467)
T ss_dssp             TSSEEEECSCG
T ss_pred             CCCEEEECCch
Confidence            58999999986

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.52  E-value=2.6e-07  Score=70.61  Aligned_cols=81  Identities=7%  Similarity=0.039  Sum_probs=59.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|..+++.+...|++|+++++++++++.+.+.    .+.+.   .+|.++.+++.+.+.++.. +++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----~g~~~---~~d~~~~~~~~~~~~~~~~-~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK----FGFDD---AFNYKEESDLTAALKRCFP-NGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----SCCSE---EEETTSCSCSHHHHHHHCT-TCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----cCCce---EEecCCHHHHHHHHHHHhC-CCC
Confidence            578999999999999999999999999999999988776554322    34332   2477665445444444322 479


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       227 d~vi~~~g~  235 (345)
T 2j3h_A          227 DIYFENVGG  235 (345)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCH
Confidence            999999974

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.49  E-value=9.1e-07  Score=67.96  Aligned_cols=80  Identities=6%  Similarity=-0.018  Sum_probs=58.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|..+++.+...|++|+++++++++++.. +   . .+.+.   .+|.++++..+++.+.. ...++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~-~ga~~---~~d~~~~~~~~~~~~~~-~~~~~  240 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-L---Q-NGAHE---VFNHREVNYIDKIKKYV-GEKGI  240 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---H-TTCSE---EEETTSTTHHHHHHHHH-CTTCE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-H---H-cCCCE---EEeCCCchHHHHHHHHc-CCCCc
Confidence            478999999999999999999999999999999988776533 2   2 34332   24777665444433322 22379


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       241 D~vi~~~G~  249 (351)
T 1yb5_A          241 DIIIEMLAN  249 (351)
T ss_dssp             EEEEESCHH
T ss_pred             EEEEECCCh
Confidence            999999974

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.46  E-value=4.6e-07  Score=67.29  Aligned_cols=75  Identities=11%  Similarity=0.107  Sum_probs=57.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.+|+++|+|+ ||+|+++++.|++.|++|++.+|+.++++++.+.+.. .+ .+     +..+.+++       .+ +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~-~~-~~-----~~~~~~~~-------~~-~  179 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH-TG-SI-----QALSMDEL-------EG-H  179 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG-GS-SE-----EECCSGGG-------TT-C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc-cC-Ce-----eEecHHHh-------cc-C
Confidence            346899999998 7999999999999999999999999888888776643 22 22     22332211       12 5


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      +.|++||+++.
T Consensus       180 ~~DivVn~t~~  190 (271)
T 1nyt_A          180 EFDLIINATSS  190 (271)
T ss_dssp             CCSEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999986

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.46  E-value=7.3e-07  Score=68.50  Aligned_cols=80  Identities=8%  Similarity=-0.039  Sum_probs=59.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|..+++.+...|++|+++++++++++.+ +.    .+.+   ..+|.++++..+++.+.. ...++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~----~g~~---~~~~~~~~~~~~~~~~~~-~~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EK----LGAA---AGFNYKKEDFSEATLKFT-KGAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH----HTCS---EEEETTTSCHHHHHHHHT-TTSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cCCc---EEEecCChHHHHHHHHHh-cCCCc
Confidence            578999999999999999999999999999999988776654 32    3333   235777665444443322 22369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999985

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.44  E-value=7.2e-07  Score=68.54  Aligned_cols=78  Identities=12%  Similarity=0.042  Sum_probs=56.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      ++++|+|++|+||..+++.+...|+ +|+++++++++.+.+.+.    .+.+   ..+|.++++..+. +.+... +++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~----~g~~---~~~d~~~~~~~~~-~~~~~~-~~~d  232 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE----LGFD---AAINYKKDNVAEQ-LRESCP-AGVD  232 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----SCCS---EEEETTTSCHHHH-HHHHCT-TCEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH----cCCc---eEEecCchHHHHH-HHHhcC-CCCC
Confidence            8999999999999999999999999 999999988766555432    3333   2357776543333 333321 2799


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      ++|+|+|.
T Consensus       233 ~vi~~~G~  240 (357)
T 2zb4_A          233 VYFDNVGG  240 (357)
T ss_dssp             EEEESCCH
T ss_pred             EEEECCCH
Confidence            99999983

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.44  E-value=1.2e-06  Score=58.37  Aligned_cols=75  Identities=19%  Similarity=0.231  Sum_probs=58.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      ++.++|+|+ |.+|..+++.|.++|++|++++++++..+++.+     .  ...++..|.++++.++++     ...+.|
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-----~--~~~~~~gd~~~~~~l~~~-----~~~~~d   72 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-----E--GFDAVIADPTDESFYRSL-----DLEGVS   72 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----T--TCEEEECCTTCHHHHHHS-----CCTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----C--CCcEEECCCCCHHHHHhC-----CcccCC
Confidence            467999998 789999999999999999999999877655442     2  256778899998876543     124689


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      .+|.+.+.
T Consensus        73 ~vi~~~~~   80 (141)
T 3llv_A           73 AVLITGSD   80 (141)
T ss_dssp             EEEECCSC
T ss_pred             EEEEecCC
Confidence            99887753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.41  E-value=5.9e-07  Score=68.42  Aligned_cols=80  Identities=14%  Similarity=0.051  Sum_probs=58.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|...++.+...|++|+++++++++.+.+.+.    .+.+.   .+|..+++..+.+.+..  .+++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~--~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE----LGFDG---AIDYKNEDLAAGLKREC--PKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCCSE---EEETTTSCHHHHHHHHC--TTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----cCCCE---EEECCCHHHHHHHHHhc--CCCc
Confidence            589999999999999999999999999999999988776655333    34332   24666655444333322  2479


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+|+|.
T Consensus       220 d~vi~~~g~  228 (336)
T 4b7c_A          220 DVFFDNVGG  228 (336)
T ss_dssp             EEEEESSCH
T ss_pred             eEEEECCCc
Confidence            999999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.36  E-value=2.8e-06  Score=64.92  Aligned_cols=80  Identities=10%  Similarity=0.008  Sum_probs=58.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|..+++.+...|++|+++++++++++.+.+     .+.+.   .+|.++++..++ +.+.....++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-----~ga~~---~~d~~~~~~~~~-~~~~~~~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-----LGADE---TVNYTHPDWPKE-VRRLTGGKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HTCSE---EEETTSTTHHHH-HHHHTTTTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----cCCCE---EEcCCcccHHHH-HHHHhCCCCc
Confidence            47899999999999999999999999999999998877665432     33332   247776543332 3332222479


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+++|.
T Consensus       237 d~vi~~~g~  245 (343)
T 2eih_A          237 DKVVDHTGA  245 (343)
T ss_dssp             EEEEESSCS
T ss_pred             eEEEECCCH
Confidence            999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.36  E-value=2.2e-06  Score=65.59  Aligned_cols=80  Identities=14%  Similarity=0.081  Sum_probs=57.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|+|+++++|..+++.+... |++|+++++++++++.+. .    .+.+.   .+|.++++..++ +.++...++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~----~g~~~---~~~~~~~~~~~~-~~~~~~~~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-R----AGADY---VINASMQDPLAE-IRRITESKG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-H----HTCSE---EEETTTSCHHHH-HHHHTTTSC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----hCCCE---EecCCCccHHHH-HHHHhcCCC
Confidence            5789999999999999999999999 999999999887765442 2    33332   246666544333 233221158


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999985

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.32  E-value=9.5e-07  Score=58.62  Aligned_cols=76  Identities=13%  Similarity=0.206  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +++.++|+|+ |.+|..+++.|.++|++|++++++++..+++    .. .+  ...+..|.++++.++++     ...+.
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~-~~--~~~~~~d~~~~~~l~~~-----~~~~~   71 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----AS-YA--THAVIANATEENELLSL-----GIRNF   71 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TT-TC--SEEEECCTTCHHHHHTT-----TGGGC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-hC--CEEEEeCCCCHHHHHhc-----CCCCC
Confidence            4567999998 9999999999999999999999987654432    11 22  34567898887655432     12468


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|++++.
T Consensus        72 d~vi~~~~~   80 (144)
T 2hmt_A           72 EYVIVAIGA   80 (144)
T ss_dssp             SEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999999875

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.32  E-value=3.5e-06  Score=64.66  Aligned_cols=79  Identities=11%  Similarity=-0.036  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.+...|++|+++++++++++.+.+     .+.+.   .+|..+++..+.+.+ .. .+++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~---~~~~~~~~~~~~~~~-~~-~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-----LGAKR---GINYRSEDFAAVIKA-ET-GQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----HTCSE---EEETTTSCHHHHHHH-HH-SSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----cCCCE---EEeCCchHHHHHHHH-Hh-CCCc
Confidence            57899999999999999999999999999999999887665443     33332   246665544333333 22 3579


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+++|.
T Consensus       237 Dvvid~~g~  245 (353)
T 4dup_A          237 DIILDMIGA  245 (353)
T ss_dssp             EEEEESCCG
T ss_pred             eEEEECCCH
Confidence            999999985

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.31  E-value=1e-05  Score=61.20  Aligned_cols=82  Identities=17%  Similarity=0.262  Sum_probs=60.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC---hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD---LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+.+|+++|+|+ ||.|++++..|++.|+ +|.+..|+   .++.+++.+.+....+..+.  ..+..+.+...+.+.  
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l~--  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEALA--  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHHH--
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhcc--
Confidence            357899999998 8999999999999998 89999999   77788888777653443343  345555433333333  


Q ss_pred             HhcCCccEEEEcCCC
Q 031016           85 LSLGFVEVLVYNAYQ   99 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~   99 (167)
                          ..|++||+-..
T Consensus       220 ----~~DiIINaTp~  230 (312)
T 3t4e_A          220 ----SADILTNGTKV  230 (312)
T ss_dssp             ----HCSEEEECSST
T ss_pred             ----CceEEEECCcC
Confidence                36999998754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.31  E-value=2.6e-06  Score=63.66  Aligned_cols=80  Identities=16%  Similarity=0.245  Sum_probs=58.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.+++.+.+.... ..+.....+.   +++.+.+.     
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~-~~~~i~~~~~---~~l~~~l~-----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV-GREAVVGVDA---RGIEDVIA-----  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH-TSCCEEEECS---TTHHHHHH-----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc-CCceEEEcCH---HHHHHHHh-----
Confidence            357899999998 7999999999999999 79999999999998888886522 1222223333   23333344     


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                       ..|++||+...
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             36999998753

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.31  E-value=4.1e-06  Score=63.87  Aligned_cols=120  Identities=11%  Similarity=0.054  Sum_probs=77.2

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecC----hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-------TVAILARD----LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      ..++||||+|.+|..++..|+.+|.       .|++++++    +++++.....+.. ....+.   .|+....+..+.+
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~-~~~~~~---~~i~~~~~~~~al   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD-CAFPLL---AGMTAHADPMTAF   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT-TTCTTE---EEEEEESSHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh-hccccc---CcEEEecCcHHHh
Confidence            4699999999999999999999885       78888888    5545544444443 111111   2443333333333


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           82 EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        82 ~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      .      ..|++|++||.    +..+  ..+.   .+.+..|+.....+++.+...-  ...++||++|..+
T Consensus        82 ~------~aD~Vi~~ag~----~~~~--g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv  136 (329)
T 1b8p_A           82 K------DADVALLVGAR----PRGP--GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPA  136 (329)
T ss_dssp             T------TCSEEEECCCC----CCCT--TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSH
T ss_pred             C------CCCEEEEeCCC----CCCC--CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCch
Confidence            3      57999999997    2222  2233   3467888888777777765432  1246999998744

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.29  E-value=4.3e-06  Score=64.47  Aligned_cols=75  Identities=16%  Similarity=0.128  Sum_probs=53.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh---hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL---GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +++++++|+|+ |++|..+++.+...|++|+++++++   ++.+. .+.    .+.+  .+  | .+ +..+++.+ . .
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~----~ga~--~v--~-~~-~~~~~~~~-~-~  244 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEE----TKTN--YY--N-SS-NGYDKLKD-S-V  244 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHH----HTCE--EE--E-CT-TCSHHHHH-H-H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHH----hCCc--ee--c-hH-HHHHHHHH-h-C
Confidence            34899999999 9999999999999999999999987   65533 222    3433  22  5 44 22222222 2 2


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                       +++|++|+++|.
T Consensus       245 -~~~d~vid~~g~  256 (366)
T 2cdc_A          245 -GKFDVIIDATGA  256 (366)
T ss_dssp             -CCEEEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             679999999986

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.24  E-value=8.2e-06  Score=55.11  Aligned_cols=78  Identities=12%  Similarity=0.152  Sum_probs=57.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.++|.|+ |.+|..+++.|.++|++|+++++++ +..+++.+.    ....+.++..|.++++.++++     .....
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~----~~~~~~~i~gd~~~~~~l~~a-----~i~~a   72 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR----LGDNADVIPGDSNDSSVLKKA-----GIDRC   72 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH----HCTTCEEEESCTTSHHHHHHH-----TTTTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh----hcCCCeEEEcCCCCHHHHHHc-----ChhhC
Confidence            456888986 9999999999999999999999974 444444332    223467888999998866543     12367


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.+|.+.+.
T Consensus        73 d~vi~~~~~   81 (153)
T 1id1_A           73 RAILALSDN   81 (153)
T ss_dssp             SEEEECSSC
T ss_pred             CEEEEecCC
Confidence            888877753

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.22  E-value=5.7e-05  Score=57.48  Aligned_cols=114  Identities=9%  Similarity=0.034  Sum_probs=70.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCC--cEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKS--QVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..++|+||+|.+|..++..|+++|  .+|++++++++  +.....+.. ...  ++..    +++..+.++++.      
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~-~~~~~~v~~----~~~t~d~~~al~------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISH-MDTGAVVRG----FLGQQQLEAALT------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHT-SCSSCEEEE----EESHHHHHHHHT------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhc-ccccceEEE----EeCCCCHHHHcC------
Confidence            469999999999999999999998  68999887765  222223332 111  2222    223344444443      


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC  151 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  151 (167)
                      ..|++|+++|.    +..+-.  +.   .+.+..|+.....+.+.+...-.   .+.|+++|.
T Consensus        76 gaDvVi~~ag~----~~~~g~--~r---~dl~~~N~~~~~~i~~~i~~~~p---~~~viv~SN  126 (326)
T 1smk_A           76 GMDLIIVPAGV----PRKPGM--TR---DDLFKINAGIVKTLCEGIAKCCP---RAIVNLISN  126 (326)
T ss_dssp             TCSEEEECCCC----CCCSSC--CC---SHHHHHHHHHHHHHHHHHHHHCT---TSEEEECCS
T ss_pred             CCCEEEEcCCc----CCCCCC--CH---HHHHHHHHHHHHHHHHHHHhhCC---CeEEEEECC
Confidence            57999999997    222221  22   24478888888777777664432   345555443

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.21  E-value=8.3e-06  Score=62.30  Aligned_cols=79  Identities=9%  Similarity=0.045  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|...++.+...|++|+++++++++.+.+.+     .+.+..   .|..  +++.+.+.+.....++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----~ga~~v---~~~~--~~~~~~v~~~~~~~g~  228 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-----VGADIV---LPLE--EGWAKAVREATGGAGV  228 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----HTCSEE---EESS--TTHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----cCCcEE---ecCc--hhHHHHHHHHhCCCCc
Confidence            57899999999999999999999999999999998887754432     333322   2443  2333333333222369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++++++|.
T Consensus       229 Dvvid~~g~  237 (342)
T 4eye_A          229 DMVVDPIGG  237 (342)
T ss_dssp             EEEEESCC-
T ss_pred             eEEEECCch
Confidence            999999986

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.16  E-value=7.8e-06  Score=64.63  Aligned_cols=84  Identities=11%  Similarity=0.025  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEee--cC---------CHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRID--CS---------DSRSVRE   79 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D--~~---------~~~~~~~   79 (167)
                      .+++++|+|++|++|...++.+...|++|+++++++++++.+.    . .+.+..+...|  +.         +.++.+.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~----~-lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR----A-LGCDLVINRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----h-cCCCEEEecccccccccccccccccchhhhH
Confidence            5899999999999999999999999999999998877765442    2 44443222111  11         1233344


Q ss_pred             HHHHHH-h-cCCccEEEEcCCC
Q 031016           80 AFEGVL-S-LGFVEVLVYNAYQ   99 (167)
Q Consensus        80 ~~~~~~-~-~~~i~~lv~~ag~   99 (167)
                      +.+.+. . ...+|++|+++|.
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHhCCCceEEEECCCc
Confidence            455554 2 2469999999974

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.15  E-value=2.4e-05  Score=58.05  Aligned_cols=75  Identities=8%  Similarity=0.131  Sum_probs=57.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.+.. .+ ++..  .|+   +++.       + +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~-~~-~~~~--~~~---~~~~-------~-~  179 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP-YG-NIQA--VSM---DSIP-------L-Q  179 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-GS-CEEE--EEG---GGCC-------C-S
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc-cC-CeEE--eeH---HHhc-------c-C
Confidence            346899999998 7999999999999999999999999988888877654 22 2222  233   1110       1 4


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++||+.+.
T Consensus       180 ~~DivIn~t~~  190 (272)
T 1p77_A          180 TYDLVINATSA  190 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            78999999987

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.15  E-value=9.5e-06  Score=61.87  Aligned_cols=80  Identities=10%  Similarity=0.053  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+++++|...++.+...|++|+++++++++.+.+.+     .+.+.   .+|..+++..+.+.+ .....++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----lga~~---~~~~~~~~~~~~~~~-~~~~~g~  214 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-----LGAAY---VIDTSTAPLYETVME-LTNGIGA  214 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-----HTCSE---EEETTTSCHHHHHHH-HTTTSCE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----CCCcE---EEeCCcccHHHHHHH-HhCCCCC
Confidence            57899999999999999999998899999999998887765543     33332   236555543333333 2222369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+++|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.14  E-value=5.4e-06  Score=63.07  Aligned_cols=80  Identities=11%  Similarity=0.068  Sum_probs=57.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.+...|++|+++++++++++... .    .+.+.   .+|..+++..+.+.+ .....++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~----~ga~~---~~~~~~~~~~~~~~~-~~~~~g~  218 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-E----YGAEY---LINASKEDILRQVLK-FTNGKGV  218 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----TTCSE---EEETTTSCHHHHHHH-HTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H----cCCcE---EEeCCCchHHHHHHH-HhCCCCc
Confidence            5789999999999999999999999999999999887765332 2    34332   236655544443333 2222369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++++++|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999985

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.14  E-value=5.7e-06  Score=62.72  Aligned_cols=80  Identities=11%  Similarity=-0.043  Sum_probs=58.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|...++.+...|++|+++++++++++.+.+     .+.+.   ..|..+++..+++.+.. ...++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----~Ga~~---~~~~~~~~~~~~~~~~~-~~~g~  210 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-----LGAWE---TIDYSHEDVAKRVLELT-DGKKC  210 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-----HTCSE---EEETTTSCHHHHHHHHT-TTCCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----cCCCE---EEeCCCccHHHHHHHHh-CCCCc
Confidence            47899999999999999999999999999999998877664432     34332   23666554444433322 22369


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++++++|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999985

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=98.13  E-value=6.6e-05  Score=57.65  Aligned_cols=83  Identities=14%  Similarity=0.035  Sum_probs=59.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|.|+ |++|...++.....|++ |+++++++++.+.+.+ +    ...+..+..|-.+.+++.+.+.+......
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l----~~~~~~~~~~~~~~~~~~~~v~~~t~g~g  252 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I----CPEVVTHKVERLSAEESAKKIVESFGGIE  252 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H----CTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----chhcccccccccchHHHHHHHHHHhCCCC
Confidence            4788999998 99999999988889997 8888988877655443 2    22444445555555665554444332347


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999986

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.08  E-value=1.9e-05  Score=60.84  Aligned_cols=79  Identities=8%  Similarity=-0.082  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.+...|++|+++++++++.+.+.+     .+.+..   +|..+++ +.+.+.+.. .+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----~Ga~~~---~~~~~~~-~~~~~~~~~-~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-----LGCDRP---INYKTEP-VGTVLKQEY-PEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----TTCSEE---EETTTSC-HHHHHHHHC-TTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----cCCcEE---EecCChh-HHHHHHHhc-CCCC
Confidence            47899999999999999999999999999999998776654432     344322   3554433 333233221 2468


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+++|.
T Consensus       233 D~vid~~g~  241 (362)
T 2c0c_A          233 DVVYESVGG  241 (362)
T ss_dssp             EEEEECSCT
T ss_pred             CEEEECCCH
Confidence            999999874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.05  E-value=2.2e-05  Score=59.97  Aligned_cols=77  Identities=12%  Similarity=-0.019  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.+...|++|+++ +++++++.+ +.    .+.+.    +| .+++ +.+.+.+.....++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~----lGa~~----i~-~~~~-~~~~~~~~~~~~g~  217 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RD----LGATP----ID-ASRE-PEDYAAEHTAGQGF  217 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HH----HTSEE----EE-TTSC-HHHHHHHHHTTSCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HH----cCCCE----ec-cCCC-HHHHHHHHhcCCCc
Confidence            57899999999999999999999999999988 766654433 22    34442    45 3333 33333333322469


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.++|.
T Consensus       218 D~vid~~g~  226 (343)
T 3gaz_A          218 DLVYDTLGG  226 (343)
T ss_dssp             EEEEESSCT
T ss_pred             eEEEECCCc
Confidence            999999974

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.03  E-value=2.4e-05  Score=62.09  Aligned_cols=84  Identities=8%  Similarity=-0.006  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEe--e--------cCCHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRI--D--------CSDSRSVREA   80 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--D--------~~~~~~~~~~   80 (167)
                      .+++++|+|++|++|...++.+...|++|+++++++++++.+. .    .+.+..+-..  |        ..++++.+++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~----lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-A----MGAEAIIDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----HTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-h----hCCcEEEecCcCcccccccccccchHHHHHH
Confidence            5789999999999999999999999999999988877765443 2    3443222111  1        2344555555


Q ss_pred             HHHHH-hc--CCccEEEEcCCC
Q 031016           81 FEGVL-SL--GFVEVLVYNAYQ   99 (167)
Q Consensus        81 ~~~~~-~~--~~i~~lv~~ag~   99 (167)
                      .+.+. ..  .++|+++.++|.
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc
Confidence            55555 22  379999999873

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.02  E-value=4.2e-05  Score=58.26  Aligned_cols=77  Identities=16%  Similarity=0.115  Sum_probs=55.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+ |++|...++.+...|++|+++++++++++.+.    . .+.+.   .+|.++++..+. +.+..  +++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~---~~d~~~~~~~~~-~~~~~--~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----E-LGADL---VVNPLKEDAAKF-MKEKV--GGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----H-TTCSE---EECTTTSCHHHH-HHHHH--SSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-CCCCE---EecCCCccHHHH-HHHHh--CCC
Confidence            4789999999 88999999999999999999999887765443    2 34432   247665432222 22222  679


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|+++|.
T Consensus       232 d~vid~~g~  240 (339)
T 1rjw_A          232 HAAVVTAVS  240 (339)
T ss_dssp             EEEEESSCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.01  E-value=3.1e-05  Score=50.90  Aligned_cols=76  Identities=14%  Similarity=0.298  Sum_probs=54.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +..++|+|+ |.+|..+++.|.++|++|++++++++..+++.+.    .+  +..+..|.++++.+.+.     ...+.|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----~~--~~~~~~d~~~~~~l~~~-----~~~~~d   71 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----ID--ALVINGDCTKIKTLEDA-----GIEDAD   71 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CS--SEEEESCTTSHHHHHHT-----TTTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----cC--cEEEEcCCCCHHHHHHc-----CcccCC
Confidence            346888887 9999999999999999999999987765544321    22  34567788877654321     124689


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      .+|.+.+.
T Consensus        72 ~vi~~~~~   79 (140)
T 1lss_A           72 MYIAVTGK   79 (140)
T ss_dssp             EEEECCSC
T ss_pred             EEEEeeCC
Confidence            99998753

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.01  E-value=3e-05  Score=59.26  Aligned_cols=79  Identities=9%  Similarity=0.061  Sum_probs=56.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++++|+||+|++|...++.+...|++|+++++++++.+.+.+     .+.+.   .+|..+++..+. +.+.....++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-----~Ga~~---~~~~~~~~~~~~-v~~~~~~~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-----IGAAH---VLNEKAPDFEAT-LREVMKAEQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-----HTCSE---EEETTSTTHHHH-HHHHHHHHCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----cCCCE---EEECCcHHHHHH-HHHHhcCCCCc
Confidence            4799999999999999999999999999999998887665432     34332   235555443333 33332123699


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      ++++++|.
T Consensus       236 ~vid~~g~  243 (349)
T 3pi7_A          236 IFLDAVTG  243 (349)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999986

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.01  E-value=3.9e-05  Score=59.09  Aligned_cols=75  Identities=12%  Similarity=0.133  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+...+.    .+.+.   .+|..+++.++    ++  .+.+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----lGa~~---v~~~~~~~~~~----~~--~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN----FGADS---FLVSRDQEQMQ----AA--AGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT----SCCSE---EEETTCHHHHH----HT--TTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cCCce---EEeccCHHHHH----Hh--hCCC
Confidence            5789999996 9999999999999999999999988776654422    44432   23666654332    22  2579


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|.++|.
T Consensus       253 D~vid~~g~  261 (366)
T 1yqd_A          253 DGIIDTVSA  261 (366)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCc
Confidence            999999986

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.00  E-value=5.4e-05  Score=58.35  Aligned_cols=76  Identities=21%  Similarity=0.210  Sum_probs=56.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.+++++|+|+ |++|+.+++.+...|++|++.+|++++++.+.+....    .+.   ++..+.+++.+.+.      .
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----~~~---~~~~~~~~~~~~~~------~  230 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVE---LLYSNSAEIETAVA------E  230 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSE---EEECCHHHHHHHHH------T
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----eeE---eeeCCHHHHHHHHc------C
Confidence            45689999999 9999999999999999999999998887776554322    221   22234444443332      5


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      .|++|++++.
T Consensus       231 ~DvVI~~~~~  240 (361)
T 1pjc_A          231 ADLLIGAVLV  240 (361)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            8999999986

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.96  E-value=1.9e-05  Score=59.37  Aligned_cols=75  Identities=11%  Similarity=0.104  Sum_probs=54.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.+++++|+|+ |++|++++..|++.|+ +|++.+|+.++.+++.+.+.. ...+       +.+.+++.+      ...
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~-~~~~-------~~~~~~~~~------~~~  203 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE-RRSA-------YFSLAEAET------RLA  203 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS-SSCC-------EECHHHHHH------TGG
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh-ccCc-------eeeHHHHHh------hhc
Confidence            46899999998 7999999999999998 899999999888777765422 1001       112222222      224


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++|++.+.
T Consensus       204 ~aDivIn~t~~  214 (297)
T 2egg_A          204 EYDIIINTTSV  214 (297)
T ss_dssp             GCSEEEECSCT
T ss_pred             cCCEEEECCCC
Confidence            68999999986

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.94  E-value=0.00011  Score=56.99  Aligned_cols=77  Identities=16%  Similarity=0.200  Sum_probs=58.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.+++++|+|+ |++|+.+++.+...|++|++.++++++++.+.+.    .+..+   .++..+.+++++.+.      
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~----~g~~~---~~~~~~~~~l~~~l~------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAE----FCGRI---HTRYSSAYELEGAVK------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TTTSS---EEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh----cCCee---EeccCCHHHHHHHHc------
Confidence            457899999999 9999999999999999999999998876655443    23332   234455556655544      


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++|++++.
T Consensus       231 ~aDvVi~~~~~  241 (377)
T 2vhw_A          231 RADLVIGAVLV  241 (377)
T ss_dssp             HCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            47999999876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.88  E-value=9.5e-05  Score=56.44  Aligned_cols=78  Identities=10%  Similarity=0.102  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.+...|++|+++++++++.+.+.+     .+.+..   +|..+  ++.+.+.+. ..+.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~v---i~~~~--~~~~~~~~~-~~~g~  218 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-----MGADIV---LNHKE--SLLNQFKTQ-GIELV  218 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-----HTCSEE---ECTTS--CHHHHHHHH-TCCCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----cCCcEE---EECCc--cHHHHHHHh-CCCCc
Confidence            47899999999999999999999999999999998877655433     233321   23322  122222222 23468


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.++|.
T Consensus       219 Dvv~d~~g~  227 (346)
T 3fbg_A          219 DYVFCTFNT  227 (346)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCc
Confidence            888888764

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.87  E-value=6.4e-05  Score=57.94  Aligned_cols=70  Identities=20%  Similarity=0.270  Sum_probs=55.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++|.|| |.+|+.+++.|.+ .++|.+.+++.+.+++..        .....+.+|++|.+++++++.      +.|++
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--------~~~~~~~~d~~d~~~l~~~~~------~~DvV   81 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--------EFATPLKVDASNFDKLVEVMK------EFELV   81 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--------TTSEEEECCTTCHHHHHHHHT------TCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--------ccCCcEEEecCCHHHHHHHHh------CCCEE
Confidence            4888898 9999999999876 478999999887765542        234567889999998887765      46999


Q ss_pred             EEcCCC
Q 031016           94 VYNAYQ   99 (167)
Q Consensus        94 v~~ag~   99 (167)
                      |++++.
T Consensus        82 i~~~p~   87 (365)
T 3abi_A           82 IGALPG   87 (365)
T ss_dssp             EECCCG
T ss_pred             EEecCC
Confidence            999875

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.87  E-value=0.00022  Score=53.87  Aligned_cols=115  Identities=12%  Similarity=0.113  Sum_probs=69.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEec--ChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILAR--DLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .++||||+|.+|..++..|+.+|.  .+.++++  ++++++.....+...   .+.++.+...|    +++.+.+     
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al-----   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII-----   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG-----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh-----
Confidence            489999999999999999999875  5888888  554444323333221   11222222211    1112112     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC  151 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  151 (167)
                       ...|++|++||.    +..+-  .+   -.+.+..|+.....+.+.+...-    .+.++++|.
T Consensus        73 -~gaD~Vi~~Ag~----~~~~g--~~---r~dl~~~N~~i~~~i~~~i~~~~----~~~vlv~SN  123 (313)
T 1hye_A           73 -DESDVVIITSGV----PRKEG--MS---RMDLAKTNAKIVGKYAKKIAEIC----DTKIFVITN  123 (313)
T ss_dssp             -TTCSEEEECCSC----CCCTT--CC---HHHHHHHHHHHHHHHHHHHHHHC----CCEEEECSS
T ss_pred             -CCCCEEEECCCC----CCCCC--Cc---HHHHHHHHHHHHHHHHHHHHHhC----CeEEEEecC
Confidence             368999999997    22221  22   24558899998888887776543    245555554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.86  E-value=8.8e-05  Score=49.27  Aligned_cols=75  Identities=15%  Similarity=0.214  Sum_probs=57.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.++|.|. |.+|..+++.|.++|++|++++++++..+++.+     .  .+..+..|.++++.++++     ...+.|
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-----~--g~~~i~gd~~~~~~l~~a-----~i~~ad   73 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-----R--GVRAVLGNAANEEIMQLA-----HLECAK   73 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----T--TCEEEESCTTSHHHHHHT-----TGGGCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----c--CCCEEECCCCCHHHHHhc-----CcccCC
Confidence            355888887 899999999999999999999999887665442     2  355678899998866542     113578


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      .+|.+.+.
T Consensus        74 ~vi~~~~~   81 (140)
T 3fwz_A           74 WLILTIPN   81 (140)
T ss_dssp             EEEECCSC
T ss_pred             EEEEECCC
Confidence            88877754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.85  E-value=5.7e-05  Score=56.54  Aligned_cols=73  Identities=10%  Similarity=0.031  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|+|++|++|...++.+...|++|+++++++++.+.+.+     .+.+..   +|..+ ++..    +.+   ++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----~ga~~~---~~~~~~~~~~----~~~---~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-----LGAEEA---ATYAEVPERA----KAW---GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-----TTCSEE---EEGGGHHHHH----HHT---TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----cCCCEE---EECCcchhHH----HHh---cC
Confidence            47899999999999999999999999999999998877654432     333321   35544 2221    222   46


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|+ +|.
T Consensus       190 ~d~vid-~g~  198 (302)
T 1iz0_A          190 LDLVLE-VRG  198 (302)
T ss_dssp             EEEEEE-CSC
T ss_pred             ceEEEE-CCH
Confidence            888888 764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.84  E-value=0.00024  Score=53.46  Aligned_cols=113  Identities=10%  Similarity=-0.075  Sum_probs=69.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEec--ChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILAR--DLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .++||||+|.+|..++..|+.+|.  .+.++++  ++++++.....+...  ...++.+.. +  +.+.          +
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a----------~   68 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED----------T   68 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----------h
Confidence            489999999999999999999875  5888888  665554433444331  122333322 1  2211          1


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGC  151 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  151 (167)
                      ...|++|+++|.    +..+-  .+.   .+.+..|+.....+.+.+...-   ..+.|+++|.
T Consensus        69 ~~aDvVi~~ag~----~~~~g--~~r---~dl~~~N~~i~~~i~~~i~~~~---p~~~viv~SN  120 (303)
T 1o6z_A           69 AGSDVVVITAGI----PRQPG--QTR---IDLAGDNAPIMEDIQSSLDEHN---DDYISLTTSN  120 (303)
T ss_dssp             TTCSEEEECCCC----CCCTT--CCH---HHHHHHHHHHHHHHHHHHHTTC---SCCEEEECCS
T ss_pred             CCCCEEEEcCCC----CCCCC--CCH---HHHHHHHHHHHHHHHHHHHHHC---CCcEEEEeCC
Confidence            368999999997    22222  233   3458888888777777665431   2345555443

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.80  E-value=0.00012  Score=56.21  Aligned_cols=79  Identities=10%  Similarity=-0.067  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+| +|++|...++.+...|++|+++++++++++.+. .    .+.+..   +| .+.+++.+.+.++....++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~----lGa~~v---i~-~~~~~~~~~v~~~~~g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-A----LGADHG---IN-RLEEDWVERVYALTGDRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H----HTCSEE---EE-TTTSCHHHHHHHHHTTCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-H----cCCCEE---Ec-CCcccHHHHHHHHhCCCCc
Confidence            578999999 799999999999899999999999887765533 2    344322   25 4433344334433322379


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.++|.
T Consensus       259 D~vid~~g~  267 (363)
T 3uog_A          259 DHILEIAGG  267 (363)
T ss_dssp             EEEEEETTS
T ss_pred             eEEEECCCh
Confidence            999999985

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.80  E-value=5.4e-05  Score=51.15  Aligned_cols=77  Identities=16%  Similarity=0.220  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++.++|+|+ |.+|..+++.|.++|++|+++++++++.+.+.+   . .  ....+..|.++++.+++.     .....
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~-~--g~~~~~~d~~~~~~l~~~-----~~~~a   85 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E-F--SGFTVVGDAAEFETLKEC-----GMEKA   85 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T-C--CSEEEESCTTSHHHHHTT-----TGGGC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c-C--CCcEEEecCCCHHHHHHc-----CcccC
Confidence            4678999996 999999999999999999999998876543210   1 2  234566788776543321     12357


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.+|.+.+.
T Consensus        86 d~Vi~~~~~   94 (155)
T 2g1u_A           86 DMVFAFTND   94 (155)
T ss_dssp             SEEEECSSC
T ss_pred             CEEEEEeCC
Confidence            999888764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.77  E-value=0.00018  Score=55.47  Aligned_cols=76  Identities=12%  Similarity=0.046  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.+...|++|+++++ +++.+.+ +   . .+.+..   +|..+++..+    ++.+.+++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~---~-lGa~~v---~~~~~~~~~~----~~~~~~g~  249 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-R---K-LGADDV---IDYKSGSVEE----QLKSLKPF  249 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-H---H-TTCSEE---EETTSSCHHH----HHHTSCCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-H---H-cCCCEE---EECCchHHHH----HHhhcCCC
Confidence            5789999999999999999999899999988884 4444332 2   2 444422   3555543222    23323679


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|.++|.
T Consensus       250 D~vid~~g~  258 (375)
T 2vn8_A          250 DFILDNVGG  258 (375)
T ss_dssp             SEEEESSCT
T ss_pred             CEEEECCCC
Confidence            999999987

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.71  E-value=3.5e-05  Score=51.43  Aligned_cols=70  Identities=19%  Similarity=0.304  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +++++|.|+ |++|+.+++.|.+.|++|.+.+|++++.+++.+.+    +.++    .+..+   .++.+.      ..|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----~~~~----~~~~~---~~~~~~------~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----EYEY----VLIND---IDSLIK------NND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----TCEE----EECSC---HHHHHH------TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----CCce----EeecC---HHHHhc------CCC
Confidence            788999997 99999999999999999888999988887766654    2221    12223   233333      468


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      ++|++.+.
T Consensus        83 ivi~at~~   90 (144)
T 3oj0_A           83 VIITATSS   90 (144)
T ss_dssp             EEEECSCC
T ss_pred             EEEEeCCC
Confidence            88888875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.70  E-value=0.00015  Score=53.96  Aligned_cols=74  Identities=11%  Similarity=0.195  Sum_probs=56.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+++.+.+.. .+ .+...  +..+   +.         
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~-~~-~~~~~--~~~~---l~---------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA-YG-EVKAQ--AFEQ---LK---------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG-GS-CEEEE--EGGG---CC---------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc-cC-CeeEe--eHHH---hc---------
Confidence            357899999998 7999999999999996 899999999999888888765 22 23333  2211   10         


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      ...|++||+...
T Consensus       186 ~~aDiIInaTp~  197 (281)
T 3o8q_A          186 QSYDVIINSTSA  197 (281)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEEcCcC
Confidence            357999998754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.70  E-value=0.00015  Score=55.68  Aligned_cols=85  Identities=9%  Similarity=0.007  Sum_probs=52.4

Q ss_pred             CC-cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH--HHHHHHHHHHH--
Q 031016           11 CR-GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS--RSVREAFEGVL--   85 (167)
Q Consensus        11 ~~-~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~--   85 (167)
                      .+ .+++|+|++|++|...++.+...|++|++++++.++..+..+.++. .+.+..+   |..+.  +++.+.+.++.  
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-lGa~~vi---~~~~~~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-LGATQVI---TEDQNNSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-HTCSEEE---EHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHh-cCCeEEE---ecCccchHHHHHHHHHHhhc
Confidence            46 8999999999999999998888899999988766553332233333 4443221   22210  12222222221  


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                      ..+++|+++.++|.
T Consensus       242 ~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          242 SGGEAKLALNCVGG  255 (364)
T ss_dssp             HTCCEEEEEESSCH
T ss_pred             cCCCceEEEECCCc
Confidence            12468999988874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.70  E-value=0.00025  Score=54.22  Aligned_cols=80  Identities=15%  Similarity=0.062  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHh--c
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLS--L   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~--~   87 (167)
                      .+++++|+|+ |++|...++.+...|++|+++++++++++.+.    . .+.+. .  +|..+ ++..+++.+....  .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~-~--~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----N-CGADV-T--LVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----H-TTCSE-E--EECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----H-hCCCE-E--EcCcccccHHHHHHHHhccccC
Confidence            4789999997 89999999988889999988898877665433    2 44442 2  34443 3323332222110  2


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      +++|+++.++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999986

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.69  E-value=0.00022  Score=53.79  Aligned_cols=89  Identities=18%  Similarity=0.224  Sum_probs=56.9

Q ss_pred             CCcE-EEEEcCCC-----------------c-hhHHHHHHHHHcCCeEEEEecChhhH--------HHHHHHHHhh--cC
Q 031016           11 CRGI-AAIVGVGP-----------------N-LGRSIARKFAHEGYTVAILARDLGRL--------SRFADEIARE--EK   61 (167)
Q Consensus        11 ~~~~-~lItGa~~-----------------~-iG~~~a~~l~~~g~~v~~~~r~~~~~--------~~~~~~l~~~--~~   61 (167)
                      .||. +|||+|+.                 | .|.++|+.++++||.|++++++....        ..+.+.+...  .+
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~  114 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPAL  114 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-C
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccc
Confidence            5666 99998865                 5 99999999999999999998753210        0011111100  01


Q ss_pred             CcEEEEEeecCCHHHHHHHHHHH------------------------------H-hcCCccEEEEcCCC
Q 031016           62 SQVFAIRIDCSDSRSVREAFEGV------------------------------L-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        62 ~~~~~~~~D~~~~~~~~~~~~~~------------------------------~-~~~~i~~lv~~ag~   99 (167)
                      ..+..+.+|+.+.+++.+++...                              . .+++.|++|.+|++
T Consensus       115 ~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAV  183 (313)
T 1p9o_A          115 SGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAV  183 (313)
T ss_dssp             CSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBC
T ss_pred             cccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCch
Confidence            22445666666655555555432                              2 45789999999998

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.68  E-value=9e-05  Score=51.32  Aligned_cols=76  Identities=14%  Similarity=0.127  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .++.++|.|+ |.+|..+++.|.++ |++|+++++++++.+++.    . .+  +..+..|.++++.++++    .....
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~-~g--~~~~~gd~~~~~~l~~~----~~~~~  105 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----S-EG--RNVISGDATDPDFWERI----LDTGH  105 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----H-TT--CCEEECCTTCHHHHHTB----CSCCC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----H-CC--CCEEEcCCCCHHHHHhc----cCCCC
Confidence            4567888885 89999999999999 999999999987765543    2 23  34566788887654422    01246


Q ss_pred             ccEEEEcCC
Q 031016           90 VEVLVYNAY   98 (167)
Q Consensus        90 i~~lv~~ag   98 (167)
                      .|.+|.+.+
T Consensus       106 ad~vi~~~~  114 (183)
T 3c85_A          106 VKLVLLAMP  114 (183)
T ss_dssp             CCEEEECCS
T ss_pred             CCEEEEeCC
Confidence            788888765

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.68  E-value=0.00042  Score=52.65  Aligned_cols=77  Identities=18%  Similarity=0.155  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+.    + .+.+..   .|..+++..+.+.+ .  .+++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~~---i~~~~~~~~~~~~~-~--~g~~  233 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----R-LGAEVA---VNARDTDPAAWLQK-E--IGGA  233 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----H-TTCSEE---EETTTSCHHHHHHH-H--HSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----H-cCCCEE---EeCCCcCHHHHHHH-h--CCCC
Confidence            5789999997 89999999998889999999999887765432    2 444322   35555443333333 2  3578


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++.++|.
T Consensus       234 d~vid~~g~  242 (340)
T 3s2e_A          234 HGVLVTAVS  242 (340)
T ss_dssp             EEEEESSCC
T ss_pred             CEEEEeCCC
Confidence            999988874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.68  E-value=0.00034  Score=53.64  Aligned_cols=78  Identities=19%  Similarity=0.060  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|+|+ |++|...++.+... |++|+++++++++++.+.    . .+.+..   +|..++  +.+.+.++....+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~-lGa~~v---i~~~~~--~~~~v~~~~~g~g  254 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----R-LGADHV---VDARRD--PVKQVMELTRGRG  254 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----H-TTCSEE---EETTSC--HHHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----H-hCCCEE---Eeccch--HHHHHHHHhCCCC
Confidence            4789999999 89999999988888 999999999887665443    2 444322   355544  3333333322226


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (359)
T 1h2b_A          255 VNVAMDFVGS  264 (359)
T ss_dssp             EEEEEESSCC
T ss_pred             CcEEEECCCC
Confidence            9999999986

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.66  E-value=0.00021  Score=54.58  Aligned_cols=79  Identities=14%  Similarity=-0.026  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++++.+. .    .+.+.   ..|..+++ +.+.+.++.....
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~----~Ga~~---~~~~~~~~-~~~~v~~~~~g~g  236 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-K----VGADY---VINPFEED-VVKEVMDITDGNG  236 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-H----HTCSE---EECTTTSC-HHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H----hCCCE---EECCCCcC-HHHHHHHHcCCCC
Confidence            5789999999 9999999999999999 9999999877665443 2    33332   13555443 3222333221236


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus       237 ~D~vid~~g~  246 (348)
T 2d8a_A          237 VDVFLEFSGA  246 (348)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999975

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.64  E-value=0.00046  Score=50.44  Aligned_cols=61  Identities=18%  Similarity=0.249  Sum_probs=44.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh-------------------hhHHHHHHHHHhhc-CCcEEEEEe
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL-------------------GRLSRFADEIAREE-KSQVFAIRI   69 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~-~~~~~~~~~   69 (167)
                      .+++++|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+.... ..++..+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            4688999997 7999999999999997 899998876                   67777777776521 223444443


Q ss_pred             ecC
Q 031016           70 DCS   72 (167)
Q Consensus        70 D~~   72 (167)
                      +++
T Consensus       109 ~~~  111 (249)
T 1jw9_B          109 LLD  111 (249)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            343

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.63  E-value=0.00017  Score=51.44  Aligned_cols=72  Identities=24%  Similarity=0.267  Sum_probs=53.8

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++|.|+ |.+|..+++.|.++|++|++++++++..+++.+.    .  ...++..|.++++.++++     .....|.+|
T Consensus         3 iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~--~~~~i~gd~~~~~~l~~a-----~i~~ad~vi   70 (218)
T 3l4b_C            3 VIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----L--KATIIHGDGSHKEILRDA-----EVSKNDVVV   70 (218)
T ss_dssp             EEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----S--SSEEEESCTTSHHHHHHH-----TCCTTCEEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----c--CCeEEEcCCCCHHHHHhc-----CcccCCEEE
Confidence            789996 8999999999999999999999998877655432    2  245677888887766533     123567777


Q ss_pred             EcCC
Q 031016           95 YNAY   98 (167)
Q Consensus        95 ~~ag   98 (167)
                      .+.+
T Consensus        71 ~~~~   74 (218)
T 3l4b_C           71 ILTP   74 (218)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            6654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.62  E-value=0.00011  Score=55.50  Aligned_cols=75  Identities=13%  Similarity=0.065  Sum_probs=49.8

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +++|+|++|++|...++.+...|++|+++++++++.+.+.+     .+.+..   +|..+.+  .+.+.++ ..+++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-----lGa~~~---i~~~~~~--~~~~~~~-~~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-----LGAKEV---LAREDVM--AERIRPL-DKQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-----TTCSEE---EECC-----------C-CSCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----cCCcEE---EecCCcH--HHHHHHh-cCCcccEE
Confidence            79999999999999999998899999999998777655432     444322   3444432  2222222 22468999


Q ss_pred             EEcCCC
Q 031016           94 VYNAYQ   99 (167)
Q Consensus        94 v~~ag~   99 (167)
                      +.++|.
T Consensus       221 id~~g~  226 (328)
T 1xa0_A          221 VDPVGG  226 (328)
T ss_dssp             EECSTT
T ss_pred             EECCcH
Confidence            999875

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.62  E-value=0.00013  Score=54.05  Aligned_cols=74  Identities=14%  Similarity=0.182  Sum_probs=55.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+++.+.+..   ..+...  +..+   +.       . 
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---~~~~~~--~~~~---l~-------~-  179 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---SRLRIS--RYEA---LE-------G-  179 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---TTEEEE--CSGG---GT-------T-
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---CCeeEe--eHHH---hc-------c-
Confidence            457899999998 7999999999999996 899999999988888877643   223332  2211   11       1 


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      ...|++||+...
T Consensus       180 ~~~DivInaTp~  191 (272)
T 3pwz_A          180 QSFDIVVNATSA  191 (272)
T ss_dssp             CCCSEEEECSSG
T ss_pred             cCCCEEEECCCC
Confidence            368999998754

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.58  E-value=0.00074  Score=52.19  Aligned_cols=80  Identities=14%  Similarity=0.067  Sum_probs=54.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC--CHHHHHHHHHHHHhc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS--DSRSVREAFEGVLSL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~   87 (167)
                      .+++++|+| +|++|...++.+...| ++|+++++++++.+.+.    . .+.+. +  +|..  +.+++.+.+.++...
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~----~-lGa~~-v--i~~~~~~~~~~~~~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE----E-IGADL-T--LNRRETSVEERRKAIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH----H-TTCSE-E--EETTTSCHHHHHHHHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH----H-cCCcE-E--EeccccCcchHHHHHHHHhCC
Confidence            478999999 8999999999888899 59999999887765443    2 44432 2  2443  234444333333211


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      .++|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence            269999999986

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.56  E-value=0.00038  Score=54.40  Aligned_cols=46  Identities=20%  Similarity=0.415  Sum_probs=39.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEI   56 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   56 (167)
                      ..+++++|.|+ |++|+.+++.+...|+ +|++.+|+.++.+++.+.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            46899999998 9999999999999998 8999999988776655543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.56  E-value=0.00024  Score=54.39  Aligned_cols=117  Identities=14%  Similarity=0.039  Sum_probs=69.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .++.+.|+|++|.+|..++..++.+|.  +|++++.++++++.....+....  ..++.     .+  .+..+.+     
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-----~t--~d~~~al-----   74 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-----FT--SDIKEAL-----   74 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-----EE--SCHHHHH-----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-----Ec--CCHHHHh-----
Confidence            456799999999999999999999984  79999998877665555554311  11111     11  1222222     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCce-EEEecCC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGT-IIFTGCS  152 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~-iv~iss~  152 (167)
                       ..-|++|.++|.    +..+-     ++-.+.++.|+.-...+.+.+...-   +.+. ++++|-.
T Consensus        75 -~dADvVvitaG~----p~kpG-----~~R~dLl~~N~~I~~~i~~~i~~~~---p~a~~vlvvsNP  128 (343)
T 3fi9_A           75 -TDAKYIVSSGGA----PRKEG-----MTREDLLKGNAEIAAQLGKDIKSYC---PDCKHVIIIFNP  128 (343)
T ss_dssp             -TTEEEEEECCC----------------CHHHHHHHHHHHHHHHHHHHHHHC---TTCCEEEECSSS
T ss_pred             -CCCCEEEEccCC----CCCCC-----CCHHHHHHHHHHHHHHHHHHHHHhc---cCcEEEEEecCc
Confidence             257999999997    32222     2234557777765544444443332   2454 6777653

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.56  E-value=0.0015  Score=49.37  Aligned_cols=116  Identities=9%  Similarity=0.071  Sum_probs=70.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhcCC--cEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREEKS--QVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.|+|++|.+|..++..|+++|  ..|+++++++  .+.....+.. ...  ++....    ...+.++++.      .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~-~~~~~~l~~~~----~t~d~~~a~~------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSH-IETRATVKGYL----GPEQLPDCLK------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTT-SSSSCEEEEEE----SGGGHHHHHT------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhc-cCcCceEEEec----CCCCHHHHhC------C
Confidence            37899999999999999999988  5899999987  2333334433 111  122110    0123333333      5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      .|++|+++|.    +..+-  .+..   +.+..|+.....+.+.+.+.-   +.+.+|++|-.+.
T Consensus        69 aDvVvi~ag~----~~~~g--~~r~---dl~~~n~~i~~~i~~~i~~~~---p~a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGV----PRKPG--MTRD---DLFNTNATIVATLTAACAQHC---PDAMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSC----CCCTT--CCGG---GGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSCHH
T ss_pred             CCEEEECCCc----CCCCC--CcHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCCcc
Confidence            7999999997    22221  2222   346777776666666554432   3478888765443

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.56  E-value=0.00083  Score=50.25  Aligned_cols=72  Identities=13%  Similarity=0.142  Sum_probs=51.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh------------------hhHHHHHHHHHhhc-CCcEEEEEe
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL------------------GRLSRFADEIAREE-KSQVFAIRI   69 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~l~~~~-~~~~~~~~~   69 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++++.                  .+.+.+.+.++... ..++..+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            45788999998 7999999999999996 888888764                  45666666666521 235666666


Q ss_pred             ecCCHHHHHHHHH
Q 031016           70 DCSDSRSVREAFE   82 (167)
Q Consensus        70 D~~~~~~~~~~~~   82 (167)
                      ++++++.++.+++
T Consensus       113 ~l~~~~~~~~~~~  125 (292)
T 3h8v_A          113 NITTVENFQHFMD  125 (292)
T ss_dssp             CTTSHHHHHHHHH
T ss_pred             cCCcHHHHHHHhh
Confidence            6666555655554

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.54  E-value=0.00083  Score=51.73  Aligned_cols=78  Identities=6%  Similarity=-0.012  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|.|++|++|...++.+...|++|+.+. ++++.+. .+.    .+.+..   +|..+++-.++ +.++. .+++
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~----lGa~~v---i~~~~~~~~~~-v~~~t-~g~~  232 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKS----RGAEEV---FDYRAPNLAQT-IRTYT-KNNL  232 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHH----TTCSEE---EETTSTTHHHH-HHHHT-TTCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHH----cCCcEE---EECCCchHHHH-HHHHc-cCCc
Confidence            588999999999999999999999999998886 5555442 222    444322   35555443332 22221 2458


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.++|.
T Consensus       233 d~v~d~~g~  241 (371)
T 3gqv_A          233 RYALDCITN  241 (371)
T ss_dssp             CEEEESSCS
T ss_pred             cEEEECCCc
Confidence            999998876

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.54  E-value=0.0012  Score=50.50  Aligned_cols=79  Identities=16%  Similarity=0.125  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC--CHHHHHHHHHHHHhc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS--DSRSVREAFEGVLSL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~   87 (167)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.    . .+.+. .  +|..  +.++..+.+.+... 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~-lGa~~-v--i~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK----E-IGADL-V--LQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----H-TTCSE-E--EECSSCCHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----H-hCCCE-E--EcCcccccchHHHHHHHHhC-
Confidence            4789999996 8999999998888999 8999998877655432    2 44442 2  2444  22333222222222 


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      +++|++|.++|.
T Consensus       241 ~g~D~vid~~g~  252 (356)
T 1pl8_A          241 CKPEVTIECTGA  252 (356)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999985

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.47  E-value=0.00061  Score=52.48  Aligned_cols=79  Identities=11%  Similarity=0.153  Sum_probs=54.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++++.+. .    .+.+..   +|..+ .+++.+.+.++.. +
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~v---i~~~~~~~~~~~~~~~~~~-~  261 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V----FGATDF---VNPNDHSEPISQVLSKMTN-G  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----TTCCEE---ECGGGCSSCHHHHHHHHHT-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H----hCCceE---EeccccchhHHHHHHHHhC-C
Confidence            4789999996 8999999998888999 7999998888766443 2    444321   34443 1234433443332 4


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|++|.++|.
T Consensus       262 g~D~vid~~g~  272 (374)
T 1cdo_A          262 GVDFSLECVGN  272 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.47  E-value=0.00017  Score=54.99  Aligned_cols=77  Identities=17%  Similarity=0.053  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.    . . .+ .  ..|..+++ +.+.+.++. ..+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~-l-a~-~--v~~~~~~~-~~~~~~~~~-~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR----P-Y-AD-R--LVNPLEED-LLEVVRRVT-GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT----T-T-CS-E--EECTTTSC-HHHHHHHHH-SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----H-h-HH-h--ccCcCccC-HHHHHHHhc-CCC
Confidence            5789999999 9999999998888999 9999999876654332    1 2 11 1  13554432 333333332 246


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus       232 ~D~vid~~g~  241 (343)
T 2dq4_A          232 VEVLLEFSGN  241 (343)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            8999988874

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.44  E-value=0.0043  Score=47.10  Aligned_cols=116  Identities=9%  Similarity=-0.018  Sum_probs=72.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ...+.|+|+ |.+|..++..|+.+|.  +|+++++++++++.....+...   .+..+.....|   .+       .   
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~-------a---   70 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE-------D---   70 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG-------G---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH-------H---
Confidence            456889996 9999999999999986  8999999888777655455431   11233333222   11       1   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ...-|++|.++|.    +..+-  .+.   .+.++.|..-...+.+.+...-   +.+.++++|-.+
T Consensus        71 ~~~aDvVvi~ag~----p~kpG--~~R---~dL~~~N~~Iv~~i~~~I~~~~---p~a~vlvvtNPv  125 (326)
T 3pqe_A           71 CKDADIVCICAGA----NQKPG--ETR---LELVEKNLKIFKGIVSEVMASG---FDGIFLVATNPV  125 (326)
T ss_dssp             GTTCSEEEECCSC----CCCTT--CCH---HHHHHHHHHHHHHHHHHHHHTT---CCSEEEECSSSH
T ss_pred             hCCCCEEEEeccc----CCCCC--ccH---HHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcCChH
Confidence            2357999999987    33332  233   3457777765555555544321   346788777543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.39  E-value=0.00075  Score=51.97  Aligned_cols=79  Identities=13%  Similarity=0.167  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. .    .+.+..   +|..+ .+++.+.+.++.. +
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~v---i~~~~~~~~~~~~~~~~~~-~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-E----VGATEC---VNPQDYKKPIQEVLTEMSN-G  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----TTCSEE---ECGGGCSSCHHHHHHHHTT-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----hCCceE---ecccccchhHHHHHHHHhC-C
Confidence            4789999995 8999999998888999 7999998888765443 2    444321   34443 1223333333322 4


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|++|.++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.39  E-value=0.0007  Score=52.03  Aligned_cols=42  Identities=17%  Similarity=0.063  Sum_probs=35.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHH-cCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAH-EGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~-~g~~v~~~~r~~~~~~~~   52 (167)
                      .+++++|+||+|++|...++.+.. .|++|+++++++++.+.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            578999999999999998887766 588999999988766544

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.38  E-value=0.001  Score=51.24  Aligned_cols=74  Identities=9%  Similarity=0.088  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|+|+ |++|...++.+...|++|+++++++++.+.+.+     .+.+.   .+|..+++.+    +++.  +++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-----lGa~~---vi~~~~~~~~----~~~~--~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-----LGADE---VVNSRNADEM----AAHL--KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----HTCSE---EEETTCHHHH----HTTT--TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----cCCcE---EeccccHHHH----HHhh--cCC
Confidence            4789999998 899999999888899999999998887765432     33332   1355555422    2221  578


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|.++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999885

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.38  E-value=0.0006  Score=52.54  Aligned_cols=80  Identities=21%  Similarity=0.120  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.. +.    .+.+.   ..|..+++..+.+.+... ..+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~----lGa~~---vi~~~~~~~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EE----VGATA---TVDPSAGDVVEAIAGPVGLVPG  252 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HH----HTCSE---EECTTSSCHHHHHHSTTSSSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH----cCCCE---EECCCCcCHHHHHHhhhhccCC
Confidence            4789999998 8999999998888999 888888887765433 33    34332   235555443333222111 124


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|+++.++|.
T Consensus       253 g~Dvvid~~G~  263 (370)
T 4ej6_A          253 GVDVVIECAGV  263 (370)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999998875

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.38  E-value=0.00044  Score=53.02  Aligned_cols=74  Identities=14%  Similarity=0.082  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   89 (167)
                      .+++++|+|+ |++|...++.+...|++|+++++++++++.+.+     .+.+..   .|..++ +.    .+.+.  ++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~v---~~~~~~~~~----~~~~~--~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-----MGADHY---IATLEEGDW----GEKYF--DT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-----HTCSEE---EEGGGTSCH----HHHSC--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----cCCCEE---EcCcCchHH----HHHhh--cC
Confidence            4789999999 999999999888899999999998887655432     333322   244433 21    22221  57


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus       244 ~D~vid~~g~  253 (360)
T 1piw_A          244 FDLIVVCASS  253 (360)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999875

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.37  E-value=0.0045  Score=46.96  Aligned_cols=117  Identities=14%  Similarity=0.066  Sum_probs=69.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---c--CCcEEEEEeecCCHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---E--KSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~--~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      +....+.|+|+ |.+|.+++..|+.+|. +|+++++++++++.....+...   .  ..++...    +|.+    .+  
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t----~d~~----a~--   73 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA----NDYA----AI--   73 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----SSGG----GG--
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe----CCHH----HH--
Confidence            44567899998 9999999999999988 9999999887765443344321   1  2222211    1221    11  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           84 VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                          ..-|++|.++|.    +..+-.  +.   .+.+..|..-...+.+.+...-   +.+.++++|-.+
T Consensus        74 ----~~aDiVIiaag~----p~k~G~--~R---~dl~~~N~~i~~~i~~~i~~~~---p~a~iivvtNPv  127 (324)
T 3gvi_A           74 ----EGADVVIVTAGV----PRKPGM--SR---DDLLGINLKVMEQVGAGIKKYA---PEAFVICITNPL  127 (324)
T ss_dssp             ----TTCSEEEECCSC----CCC----------CHHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSSH
T ss_pred             ----CCCCEEEEccCc----CCCCCC--CH---HHHHHhhHHHHHHHHHHHHHHC---CCeEEEecCCCc
Confidence                357999999987    333321  22   2345566654444444443321   346788777543

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.0011  Score=51.39  Aligned_cols=79  Identities=16%  Similarity=0.072  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|.|+ |++|...++.+...|+ +|+++++++++++.+.    . .+.+  .  +|.++.+.+.+.+.++.....
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~----~-lGa~--~--i~~~~~~~~~~~v~~~t~g~g  254 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----A-QGFE--I--ADLSLDTPLHEQIAALLGEPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----H-TTCE--E--EETTSSSCHHHHHHHHHSSSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH----H-cCCc--E--EccCCcchHHHHHHHHhCCCC
Confidence            4789999995 9999999988888899 6888888887765442    2 4553  2  455544333333333322236


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (398)
T 1kol_A          255 VDCAVDAVGF  264 (398)
T ss_dssp             EEEEEECCCT
T ss_pred             CCEEEECCCC
Confidence            9999999986

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.35  E-value=0.001  Score=51.23  Aligned_cols=79  Identities=11%  Similarity=0.109  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++++.+. .    .+.+..   +|..+ .+++.+.+.++.. +
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----lGa~~v---i~~~~~~~~~~~~v~~~~~-~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A----LGATDC---LNPRELDKPVQDVITELTA-G  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----TTCSEE---ECGGGCSSCHHHHHHHHHT-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----hCCcEE---EccccccchHHHHHHHHhC-C
Confidence            4789999996 8999999998888999 7999998888765443 2    444322   24442 1223333333322 4


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++|.++|.
T Consensus       265 g~Dvvid~~G~  275 (376)
T 1e3i_A          265 GVDYSLDCAGT  275 (376)
T ss_dssp             CBSEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            79999999975

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.34  E-value=0.0026  Score=48.31  Aligned_cols=115  Identities=11%  Similarity=0.013  Sum_probs=64.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .++.+.|+|+ |.+|..++..|+.+|.  +|++++.++++++.....+....  ...+.....   +.+          .
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~----------a   73 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS----------D   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH----------H
Confidence            4567899997 9999999999999886  89999998887776555554311  112222211   111          1


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCS  152 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~  152 (167)
                      ...-|++|.++|.    +..|-     ++-.+.++.|..-...+.+.    +.+. +.+.++++|-.
T Consensus        74 ~~~aDiVvi~ag~----~~kpG-----~tR~dL~~~N~~I~~~i~~~----i~~~~p~a~ilvvtNP  127 (326)
T 3vku_A           74 AKDADLVVITAGA----PQKPG-----ETRLDLVNKNLKILKSIVDP----IVDSGFNGIFLVAANP  127 (326)
T ss_dssp             GTTCSEEEECCCC----C---------------------CHHHHHHH----HHTTTCCSEEEECSSS
T ss_pred             hcCCCEEEECCCC----CCCCC-----chHHHHHHHHHHHHHHHHHH----HHhcCCceEEEEccCc
Confidence            2467999999997    22222     22344567776644444444    4433 35677777653

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.33  E-value=0.0037  Score=47.52  Aligned_cols=74  Identities=16%  Similarity=0.088  Sum_probs=50.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---c--CCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---E--KSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ...+.|+|+ |.+|..++..|+..|. +|++.+++++.++.....+...   .  ..++..-    +|.   ++.+.   
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~---~ea~~---   77 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSY---EAALT---   77 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSH---HHHHT---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCH---HHHhC---
Confidence            346889998 9999999999999998 9999999987766543333221   1  1222211    232   22233   


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                         .-|++|.++|.
T Consensus        78 ---~aDiVi~a~g~   88 (331)
T 1pzg_A           78 ---GADCVIVTAGL   88 (331)
T ss_dssp             ---TCSEEEECCSC
T ss_pred             ---CCCEEEEccCC
Confidence               56999999987

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.32  E-value=0.00053  Score=52.92  Aligned_cols=79  Identities=15%  Similarity=0.141  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++++.+.    . .+.+..   +|..+ .+++.+.+.++. .+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~-lGa~~v---i~~~~~~~~~~~~i~~~~-~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----K-FGVNEF---VNPKDHDKPIQEVIVDLT-DG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----T-TTCCEE---ECGGGCSSCHHHHHHHHT-TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----H-cCCcEE---EccccCchhHHHHHHHhc-CC
Confidence            4788999998 9999999998888999 7999998888765332    2 444322   34432 223443344333 23


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|+++.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.32  E-value=0.0011  Score=50.42  Aligned_cols=77  Identities=6%  Similarity=-0.018  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++++|+|+ |++|...++.+...  |++|+++++++++.+.+.+     .+.+..   .|..+.   +..+.++....
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~v---i~~~~~---~~~~~~~~~g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-----LGADYV---SEMKDA---ESLINKLTDGL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-----HTCSEE---ECHHHH---HHHHHHHHTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-----hCCCEE---eccccc---hHHHHHhhcCC
Confidence            5789999999 89999999988888  9999999988877654432     333321   233220   12223332223


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|++|.++|.
T Consensus       238 g~D~vid~~g~  248 (344)
T 2h6e_A          238 GASIAIDLVGT  248 (344)
T ss_dssp             CEEEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            68999999875

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.32  E-value=0.00072  Score=52.27  Aligned_cols=80  Identities=9%  Similarity=0.079  Sum_probs=54.6

Q ss_pred             CCcEEEEEc-CCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVG-VGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItG-a~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.| |+|++|...++.+...|++|+++++++++.+.+.+     .+.+..   +|..+++..++ +.++.....
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~~---~~~~~~~~~~~-v~~~t~~~g  240 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-----QGAVHV---CNAASPTFMQD-LTEALVSTG  240 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-----TTCSCE---EETTSTTHHHH-HHHHHHHHC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-----CCCcEE---EeCCChHHHHH-HHHHhcCCC
Confidence            467889997 89999999999888899999999998877654432     444322   34444433333 222221236


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus       241 ~d~v~d~~g~  250 (379)
T 3iup_A          241 ATIAFDATGG  250 (379)
T ss_dssp             CCEEEESCEE
T ss_pred             ceEEEECCCc
Confidence            9999999885

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.32  E-value=0.00085  Score=51.60  Aligned_cols=79  Identities=15%  Similarity=0.148  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. .    .+.+..   +|..+ .+++.+.+.++. .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~v---i~~~~~~~~~~~~v~~~~-~~  259 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-E----FGATEC---INPQDFSKPIQEVLIEMT-DG  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H----HTCSEE---ECGGGCSSCHHHHHHHHT-TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H----cCCceE---eccccccccHHHHHHHHh-CC
Confidence            4789999996 8999999998888899 7999998888766543 2    343321   24433 123333333332 24


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++|.++|.
T Consensus       260 g~D~vid~~g~  270 (373)
T 2fzw_A          260 GVDYSFECIGN  270 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.32  E-value=0.0014  Score=49.97  Aligned_cols=116  Identities=11%  Similarity=0.062  Sum_probs=69.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--e-----EEEEecCh--hhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--T-----VAILARDL--GRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~-----v~~~~r~~--~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      ..++||||+|.+|..++..|+.+|.  .     +++++.++  +.++....++.. .. .-..  ....++  ...+.+ 
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~-~~~~~~~--~~~~~~--~~~~~~-   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD-CALPLLK--DVIATD--KEEIAF-   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH-TCCTTEE--EEEEES--CHHHHT-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh-hhhcccC--CEEEcC--CcHHHh-
Confidence            4689999999999999999998875  4     88888864  344444444543 21 1121  122221  111112 


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-Cc-eEEEecCC
Q 031016           83 GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KG-TIIFTGCS  152 (167)
Q Consensus        83 ~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g-~iv~iss~  152 (167)
                           ..-|++|++||.    +..+-  .+   -.+.++.|+.....+.+.    +.+.. .+ +++++|-.
T Consensus        78 -----~daDvVvitAg~----prkpG--~t---R~dll~~N~~i~~~i~~~----i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           78 -----KDLDVAILVGSM----PRRDG--ME---RKDLLKANVKIFKCQGAA----LDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             -----TTCSEEEECCSC----CCCTT--CC---TTTTHHHHHHHHHHHHHH----HHHHSCTTCEEEECSSS
T ss_pred             -----CCCCEEEEeCCC----CCCCC--CC---HHHHHHHHHHHHHHHHHH----HHHhCCCCeEEEEcCCc
Confidence                 357999999987    33332  22   344577787765555544    44443 35 57777753

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.30  E-value=0.00054  Score=52.25  Aligned_cols=41  Identities=17%  Similarity=0.192  Sum_probs=35.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            5789999997 8999999998888999999999988877644

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.29  E-value=0.0082  Score=45.33  Aligned_cols=116  Identities=14%  Similarity=0.049  Sum_probs=70.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC--hhhHHHHHHHHHhh-----cCCcEEEEEeecCCHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD--LGRLSRFADEIARE-----EKSQVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~   81 (167)
                      +..+.+.|+|+ |.+|..++..++.+|. +|++.+++  ++..+.....+...     ...++..-    ++.+      
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t----~d~~------   74 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT----SDYA------   74 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE----SCGG------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc----CCHH------
Confidence            34677999997 9999999999999998 99999998  44444333333221     11222211    1211      


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           82 EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        82 ~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                          .+..-|++|.++|.    +..|-  .+.   .+.++.|..-.-.+.+.+.+.   .+.+.++++|-.
T Consensus        75 ----a~~~aDvVIiaag~----p~kpg--~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP  129 (315)
T 3tl2_A           75 ----DTADSDVVVITAGI----ARKPG--MSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP  129 (315)
T ss_dssp             ----GGTTCSEEEECCSC----CCCTT--CCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             ----HhCCCCEEEEeCCC----CCCCC--CCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence                12468999999997    33332  333   445777776554455444433   234688887753

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.25  E-value=0.0018  Score=50.37  Aligned_cols=79  Identities=14%  Similarity=0.011  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++++.+. .    .+.+..   +|..+++..++ +.++....+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~v---i~~~~~~~~~~-i~~~t~g~g  282 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-E----LGADHV---IDPTKENFVEA-VLDYTNGLG  282 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-H----HTCSEE---ECTTTSCHHHH-HHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H----cCCCEE---EcCCCCCHHHH-HHHHhCCCC
Confidence            5789999998 8999999998888999 8999988887765433 2    344322   25544433333 332222236


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus       283 ~D~vid~~g~  292 (404)
T 3ip1_A          283 AKLFLEATGV  292 (404)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999987

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.23  E-value=0.00052  Score=49.33  Aligned_cols=72  Identities=10%  Similarity=0.026  Sum_probs=50.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.++|.|+ |.+|..+++.|.++|+ |++++++++..+++.        ..+.++..|.++++.++++     .....|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a-----~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKA-----NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------TTCEEEESCTTCHHHHHHT-----TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------cCCeEEEcCCCCHHHHHhc-----Ccchhc
Confidence            466899997 8999999999999999 999999887655432        1356777888887655432     012455


Q ss_pred             EEEEcCC
Q 031016           92 VLVYNAY   98 (167)
Q Consensus        92 ~lv~~ag   98 (167)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            5555543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.23  E-value=0.0016  Score=50.65  Aligned_cols=79  Identities=20%  Similarity=0.160  Sum_probs=53.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++++.+.    . .+.+  .  +|..+++.+.+.+.++....+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~-lGa~--~--i~~~~~~~~~~~~~~~~~g~g  254 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----D-AGFE--T--IDLRNSAPLRDQIDQILGKPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----T-TTCE--E--EETTSSSCHHHHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----H-cCCc--E--EcCCCcchHHHHHHHHhCCCC
Confidence            4789999997 9999999998888899 8999999887765432    2 4543  2  355543321222233221226


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~g~  264 (398)
T 2dph_A          255 VDCGVDAVGF  264 (398)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCC
Confidence            9999999986

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.22  E-value=0.0043  Score=47.20  Aligned_cols=119  Identities=9%  Similarity=-0.011  Sum_probs=74.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ...+.+.|+|+ |.+|..++..++.+|.  .|++++.++++++.....+..-  ..........  +|.+.         
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~---------   84 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV---------   84 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH---------
Confidence            34677899998 8999999999999986  7999999888777665556531  1111112211  22221         


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       ...-|++|.++|.    +..|-  .+.   .+.++.|..-...+.+.+.+.   .+.+.++++|-.+
T Consensus        85 -~~~aDiVvi~aG~----~~kpG--~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv  139 (331)
T 4aj2_A           85 -TANSKLVIITAGA----RQQEG--ESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPV  139 (331)
T ss_dssp             -GTTEEEEEECCSC----CCCTT--CCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             -hCCCCEEEEccCC----CCCCC--ccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChH
Confidence             1357999999997    33332  233   345777776555555554433   2346888887543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.22  E-value=0.0013  Score=50.54  Aligned_cols=79  Identities=15%  Similarity=0.110  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. .    .+.+..   +|..+ .+++.+.+.++. .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----lGa~~v---i~~~~~~~~~~~~i~~~t-~g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E----LGATEC---LNPKDYDKPIYEVICEKT-NG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H----TTCSEE---ECGGGCSSCHHHHHHHHT-TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H----cCCcEE---EecccccchHHHHHHHHh-CC
Confidence            4789999996 8999999998888899 7999998887765443 2    444322   24432 122333333332 24


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.20  E-value=0.00033  Score=52.81  Aligned_cols=41  Identities=15%  Similarity=0.241  Sum_probs=36.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      ++ ++|+|++|++|...++.+...|++|+++++++++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            45 999999999999999999999999999999888766554

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.19  E-value=0.0014  Score=50.20  Aligned_cols=74  Identities=18%  Similarity=0.186  Sum_probs=50.2

Q ss_pred             CcEEEEEcCCCchhHHH-HHHH-HHcCCe-EEEEecChh---hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSI-ARKF-AHEGYT-VAILARDLG---RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~-a~~l-~~~g~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++++|+|+ |++|... ++.+ ...|++ |++++++++   +.+.+. .    .+.+.  +  |..+++ +.+ +.++ 
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~----lGa~~--v--~~~~~~-~~~-i~~~-  239 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-E----LDATY--V--DSRQTP-VED-VPDV-  239 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-H----TTCEE--E--ETTTSC-GGG-HHHH-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-H----cCCcc--c--CCCccC-HHH-HHHh-
Confidence            489999999 9999999 8877 678997 999999877   654432 2    44432  2  544332 222 3333 


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                       .+++|++|.++|.
T Consensus       240 -~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 -YEQMDFIYEATGF  252 (357)
T ss_dssp             -SCCEEEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             2478999988875

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.18  E-value=0.015  Score=44.54  Aligned_cols=119  Identities=12%  Similarity=0.101  Sum_probs=69.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecChh--hHHHHHHHHHhh-cCCcEEEEEeecCCHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDLG--RLSRFADEIARE-EKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~   78 (167)
                      ++..-.+.|+||+|+||..++..|++...       .+.+++.++.  .++-..-+++.- ..........  ++.   .
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---~   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---R   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---H
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---H
Confidence            34556799999999999999999987532       5788887653  233333344331 1222222211  122   1


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEecC
Q 031016           79 EAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTGC  151 (167)
Q Consensus        79 ~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss  151 (167)
                      ..+      ..-|++|.++|.    +..|-  .+.++   +++.|..    +.+...+.+.+.  +..+|+.+|-
T Consensus        96 ~a~------~~advVvi~aG~----prkpG--mtR~D---Ll~~Na~----I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           96 VAF------DGVAIAIMCGAF----PRKAG--MERKD---LLEMNAR----IFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             HHT------TTCSEEEECCCC----CCCTT--CCHHH---HHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             HHh------CCCCEEEECCCC----CCCCC--CCHHH---HHHHhHH----HHHHHHHHHHhhccCceEEEEeCC
Confidence            222      357999999997    44443  34444   4778876    445555555553  2345666654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.18  E-value=0.00087  Score=51.29  Aligned_cols=37  Identities=14%  Similarity=0.089  Sum_probs=31.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      .+.+++|+|++|++|...++.+...|++++++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            4789999999999999999888888999888766543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.18  E-value=0.00084  Score=47.38  Aligned_cols=42  Identities=26%  Similarity=0.330  Sum_probs=36.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      +++|+|++|.+|.++++.|+++|++|.+.+|++++.+++.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            478999899999999999999999999999998776665543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.15  E-value=0.0013  Score=50.33  Aligned_cols=75  Identities=9%  Similarity=0.083  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|+|+ |++|...++.+...|++|+++++++++.+.+.+.    .+.+..   .|..+++.++    ++  .+.+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~----lGa~~v---i~~~~~~~~~----~~--~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD----LGADDY---VIGSDQAKMS----EL--ADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT----SCCSCE---EETTCHHHHH----HS--TTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----cCCcee---eccccHHHHH----Hh--cCCC
Confidence            4789999996 9999999998888899999999988766544322    444321   2444543222    21  2479


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.++|.
T Consensus       246 D~vid~~g~  254 (357)
T 2cf5_A          246 DYVIDTVPV  254 (357)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.14  E-value=0.00086  Score=49.60  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=38.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      +|.++|.|+ ||.|++++..|.+.|.+|.+..|+.++.+++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            789999997 89999999999999999999999999888776

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.13  E-value=0.0064  Score=44.36  Aligned_cols=34  Identities=26%  Similarity=0.360  Sum_probs=29.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      .++.++|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5688999998 6899999999999997 78887654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.11  E-value=0.011  Score=43.66  Aligned_cols=42  Identities=21%  Similarity=0.284  Sum_probs=35.8

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      +++.|.|+ |.+|..+++.|++.|++|++.+++++.+++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777876 7899999999999999999999998877766554

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.11  E-value=0.0018  Score=49.77  Aligned_cols=78  Identities=13%  Similarity=0.005  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. .    .+.+..   +|..+++..++ +.+.. .++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~----lGa~~v---i~~~~~~~~~~-~~~~~-~gg  258 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-Q----LGATHV---INSKTQDPVAA-IKEIT-DGG  258 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-H----HTCSEE---EETTTSCHHHH-HHHHT-TSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H----cCCCEE---ecCCccCHHHH-HHHhc-CCC
Confidence            4789999995 8999999998888899 6888998877665442 2    343322   24444332222 22222 136


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus       259 ~D~vid~~g~  268 (371)
T 1f8f_A          259 VNFALESTGS  268 (371)
T ss_dssp             EEEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            8888888874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.10  E-value=0.0067  Score=46.99  Aligned_cols=44  Identities=11%  Similarity=-0.030  Sum_probs=38.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD   54 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   54 (167)
                      ..+++++|+|+ |.+|..+++.+...|++|++.++++++++.+.+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            36788999999 799999999999999999999999887766543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.06  E-value=0.0014  Score=48.85  Aligned_cols=44  Identities=11%  Similarity=0.191  Sum_probs=38.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFAD   54 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   54 (167)
                      ..+|.++|+|+ ||.|++++..|.+.|+ +|.+..|+.++.+++.+
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            46899999998 6999999999999998 89999999887666543

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.05  E-value=0.017  Score=43.67  Aligned_cols=117  Identities=15%  Similarity=0.094  Sum_probs=70.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.+.|+|+ |.+|.+++..|+.+|. +|+++++++++++.....+...   .+....+...  ++.+    .+      
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----a~------   71 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----DL------   71 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GG------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----HH------
Confidence            355788895 9999999999999887 9999999988766554455431   1112222111  1221    11      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      ..-|++|.++|.    +..+-  .+..   +.+..|..-.-.+.+.+...-   +.+.++++|-.+
T Consensus        72 ~~aDvVIi~ag~----p~k~G--~~R~---dl~~~N~~i~~~i~~~i~~~~---p~a~vivvtNPv  125 (321)
T 3p7m_A           72 ENSDVVIVTAGV----PRKPG--MSRD---DLLGINIKVMQTVGEGIKHNC---PNAFVICITNPL  125 (321)
T ss_dssp             TTCSEEEECCSC----CCCTT--CCHH---HHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSSH
T ss_pred             CCCCEEEEcCCc----CCCCC--CCHH---HHHHHhHHHHHHHHHHHHHHC---CCcEEEEecCch
Confidence            357999999987    33332  2333   346667665544544444332   246788776543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.04  E-value=0.0045  Score=48.33  Aligned_cols=42  Identities=12%  Similarity=-0.003  Sum_probs=37.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      .+.+++|+|+ |.+|...++.+...|++|++.++++.+++...
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            5788999999 79999999999999999999999988766554

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.02  E-value=0.025  Score=42.85  Aligned_cols=72  Identities=15%  Similarity=0.164  Sum_probs=49.0

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---c--CCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---E--KSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +.+.|+|+ |.+|..++..|+.+|. +|++.+++++.++.....+...   .  ..++...    +|.+.    +     
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~a----l-----   80 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----NNYEY----L-----   80 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----SCGGG----G-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----CCHHH----H-----
Confidence            46889998 9999999999999998 9999999987776533333221   1  2222221    22211    1     


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                       ..-|++|.++|.
T Consensus        81 -~~aD~VI~avg~   92 (328)
T 2hjr_A           81 -QNSDVVIITAGV   92 (328)
T ss_dssp             -TTCSEEEECCSC
T ss_pred             -CCCCEEEEcCCC
Confidence             357999999987

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.01  E-value=0.0058  Score=47.68  Aligned_cols=42  Identities=10%  Similarity=-0.004  Sum_probs=37.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      +.+++++|+|+ |.+|+.+++.+...|++|++.++++++++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            45889999997 8999999999999999999999988876654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.98  E-value=0.0055  Score=46.50  Aligned_cols=78  Identities=12%  Similarity=0.020  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ |++|...++.+... |++|+++++++++.+.+.+     .+.+..+   |-.+ +..++ +.+......
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-----lGa~~~i---~~~~-~~~~~-v~~~t~g~g  239 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-----VGADAAV---KSGA-GAADA-IRELTGGQG  239 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-----TTCSEEE---ECST-THHHH-HHHHHGGGC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-----cCCCEEE---cCCC-cHHHH-HHHHhCCCC
Confidence            4789999998 99999998877777 6799999998877654432     4444322   3222 22222 222222237


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus       240 ~d~v~d~~G~  249 (345)
T 3jv7_A          240 ATAVFDFVGA  249 (345)
T ss_dssp             EEEEEESSCC
T ss_pred             CeEEEECCCC
Confidence            9999999986

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.95  E-value=0.0027  Score=50.20  Aligned_cols=78  Identities=14%  Similarity=0.043  Sum_probs=52.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +.+.+|.++|.|. |+.|.+.|+.|.++|++|.+.++++.......+.++. .+.++.  ...-  +++   .+.     
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~-~gi~~~--~g~~--~~~---~~~-----   70 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE-EGIKVV--CGSH--PLE---LLD-----   70 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH-TTCEEE--ESCC--CGG---GGG-----
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh-CCCEEE--ECCC--hHH---hhc-----
Confidence            3457899999999 7999999999999999999998865322233345544 444332  2111  111   111     


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      +..|.+|.++|+
T Consensus        71 ~~~d~vv~spgi   82 (451)
T 3lk7_A           71 EDFCYMIKNPGI   82 (451)
T ss_dssp             SCEEEEEECTTS
T ss_pred             CCCCEEEECCcC
Confidence            238999999998

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.94  E-value=0.0019  Score=49.31  Aligned_cols=79  Identities=11%  Similarity=0.025  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++++.+. .    .+.+. +  +|..+++..+++ .+.....+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~----lGa~~-v--i~~~~~~~~~~v-~~~t~g~g  235 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-E----YGATD-I--INYKNGDIVEQI-LKATDGKG  235 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-H----HTCCE-E--ECGGGSCHHHHH-HHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-H----hCCce-E--EcCCCcCHHHHH-HHHcCCCC
Confidence            4788999996 8999999998888999 7999998877654333 2    34332 1  244433333322 22212236


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus       236 ~D~v~d~~g~  245 (352)
T 3fpc_A          236 VDKVVIAGGD  245 (352)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            8999998876

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.93  E-value=0.0012  Score=49.79  Aligned_cols=74  Identities=12%  Similarity=0.036  Sum_probs=48.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|+||+|++|...++.+...|++|+++++++ + .+..+.    .+.+.   ..|..+++.+.   +   ...++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~----lGa~~---~i~~~~~~~~~---~---~~~g~  216 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKA----LGAEQ---CINYHEEDFLL---A---ISTPV  216 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHH----HTCSE---EEETTTSCHHH---H---CCSCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHH----cCCCE---EEeCCCcchhh---h---hccCC
Confidence            578999999999999999999999999998887543 3 233333    34432   13444443221   1   12467


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus       217 D~v~d~~g~  225 (321)
T 3tqh_A          217 DAVIDLVGG  225 (321)
T ss_dssp             EEEEESSCH
T ss_pred             CEEEECCCc
Confidence            888887764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.93  E-value=0.028  Score=42.03  Aligned_cols=113  Identities=12%  Similarity=-0.003  Sum_probs=68.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.|+|+ |.+|.+++..|+.+|.  +|++.+++++.++.....+...   .+....+...  +|.+.    +      ..
T Consensus         3 I~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----~------~~   69 (294)
T 1oju_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----L------KG   69 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG----G------TT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH----h------CC
Confidence            788999 9999999999999987  8999999987765322223221   1122222211  12221    2      35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      -|++|.++|.    +..+-  .+..   +.++.|..-.    +.+.+.+.+.. .+.++++|-.+
T Consensus        70 aDiVViaag~----~~kpG--~~R~---dl~~~N~~i~----~~i~~~i~~~~p~a~iivvsNPv  121 (294)
T 1oju_A           70 SEIIVVTAGL----ARKPG--MTRL---DLAHKNAGII----KDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             CSEEEECCCC----CCCSS--CCHH---HHHHHHHHHH----HHHHHHHHTTSTTCEEEECSSSH
T ss_pred             CCEEEECCCC----CCCCC--CcHH---HHHHHHHHHH----HHHHHHHHhhCCCeEEEEeCCcc
Confidence            7999999997    32322  2333   3466675544    44444444443 57888877543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.92  E-value=0.015  Score=42.99  Aligned_cols=83  Identities=16%  Similarity=0.270  Sum_probs=57.5

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC---eEEEEecChhhHHHHHHHHH---------hhcCCcEEEEEeecCCHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY---TVAILARDLGRLSRFADEIA---------REEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~---------~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      +++.|.|+ |.+|.++++.|.+.|+   +|++.+|++++.+++.+...         .....++.++.+   .++.++.+
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            45778888 8999999999999998   89999999888777665311         002345555544   35667777


Q ss_pred             HHHHH-h-cCCccEEEEcCCC
Q 031016           81 FEGVL-S-LGFVEVLVYNAYQ   99 (167)
Q Consensus        81 ~~~~~-~-~~~i~~lv~~ag~   99 (167)
                      ++++. . ..+=.++|.+++.
T Consensus        80 l~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           80 CEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHhhccCCCeEEEEecCC
Confidence            77776 4 4333377777654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.90  E-value=0.0016  Score=51.76  Aligned_cols=72  Identities=21%  Similarity=0.284  Sum_probs=55.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++|.|+ |.+|..+|+.|.++|++|++++++++..+++.+.+      ++..+..|.++++-++++=     ...-|.+|
T Consensus         6 iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Ag-----i~~ad~~i   73 (461)
T 4g65_A            6 IIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAG-----AQDADMLV   73 (461)
T ss_dssp             EEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHT-----TTTCSEEE
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcC-----CCcCCEEE
Confidence            677777 79999999999999999999999988877665432      4667889999998776431     13567777


Q ss_pred             EcCC
Q 031016           95 YNAY   98 (167)
Q Consensus        95 ~~ag   98 (167)
                      ..-+
T Consensus        74 a~t~   77 (461)
T 4g65_A           74 AVTN   77 (461)
T ss_dssp             ECCS
T ss_pred             EEcC
Confidence            6543

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.86  E-value=0.047  Score=41.11  Aligned_cols=115  Identities=11%  Similarity=0.029  Sum_probs=69.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc-C--CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC-CHHHHHHHHHHHHhcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE-G--YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS-DSRSVREAFEGVLSLGF   89 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~-g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~   89 (167)
                      .+.|+||+|.+|..++..|.++ +  ..+++++.++ ..+...-++.. ...........-+ +.+.    +      ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~-~~~~~~v~~~~~~~~~~~----~------~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH-IPTAVKIKGFSGEDATPA----L------EG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHT-SCSSEEEEEECSSCCHHH----H------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhC-CCCCceEEEecCCCcHHH----h------CC
Confidence            3789999999999999999886 5  3789999876 33333334443 2222222211101 1222    1      35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      .|++|.++|.    +..|-  .+   -.+.++.|..-.-.+.+.+.+.   .+.+.++++|-.
T Consensus        70 aDivii~ag~----~rkpG--~~---R~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           70 ADVVLISAGV----ARKPG--MD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             CSEEEECCSC----SCCTT--CC---HHHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CCEEEEeCCC----CCCCC--CC---HHHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            7999999997    33332  33   3455778877665555555443   234688887653

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.82  E-value=0.01  Score=45.22  Aligned_cols=60  Identities=12%  Similarity=0.170  Sum_probs=43.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh-------------------hhHHHHHHHHHhhcCC--cEEEE
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL-------------------GRLSRFADEIAREEKS--QVFAI   67 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~--~~~~~   67 (167)
                      +.++.++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.++. .+.  ++..+
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~-inP~v~v~~~  109 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMDATGV  109 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHH-HCTTCEEEEE
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHH-hCCCCEEEEE
Confidence            35788999999 7999999999999997 788887642                   456666677766 443  44444


Q ss_pred             Eeec
Q 031016           68 RIDC   71 (167)
Q Consensus        68 ~~D~   71 (167)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            4333

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.79  E-value=0.0032  Score=48.58  Aligned_cols=47  Identities=17%  Similarity=0.231  Sum_probs=40.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI   56 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   56 (167)
                      ++.+|+++|.|. |.+|..+++.|.+.|++|++.+++.++++++.+.+
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            468999999997 89999999999999999998899887777666543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.76  E-value=0.0031  Score=49.47  Aligned_cols=73  Identities=16%  Similarity=0.175  Sum_probs=51.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      ..++|.|. |.+|..+++.|.++|.+|++++++++..+.+.+     .+  +.++..|.++++.++++     ...+.+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-----~g--~~vi~GDat~~~~L~~a-----gi~~A~~   71 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-----FG--MKVFYGDATRMDLLESA-----GAAKAEV   71 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-----TT--CCCEESCTTCHHHHHHT-----TTTTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-----CC--CeEEEcCCCCHHHHHhc-----CCCccCE
Confidence            44888887 899999999999999999999999887665532     22  34566777777655433     1124566


Q ss_pred             EEEcCC
Q 031016           93 LVYNAY   98 (167)
Q Consensus        93 lv~~ag   98 (167)
                      +|.+.+
T Consensus        72 viv~~~   77 (413)
T 3l9w_A           72 LINAID   77 (413)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            665553

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.76  E-value=0.013  Score=44.42  Aligned_cols=117  Identities=10%  Similarity=-0.008  Sum_probs=70.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +...+.|+|+ |.+|..++..|+.++.  .|++.+.++++++.....+...  ...++.+..   .+.+.    +     
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~~~a----~-----   74 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS---AEYSD----A-----   74 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE---CCGGG----G-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE---CCHHH----h-----
Confidence            3456999999 9999999999998875  7999999888777655555431  112232222   12221    2     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       ..-|++|..+|.    +..+-  .+.   .+.+..|..-...+.+.+...   .+.+.++++|-.+
T Consensus        75 -~~aDvVii~ag~----~~k~g--~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  128 (326)
T 2zqz_A           75 -KDADLVVITAGA----PQKPG--ETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPV  128 (326)
T ss_dssp             -GGCSEEEECCCC----C-------CH---HHHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSH
T ss_pred             -CCCCEEEEcCCC----CCCCC--CCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcH
Confidence             357999999987    22222  233   344566665444444443332   2357888876543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.75  E-value=0.00048  Score=51.21  Aligned_cols=42  Identities=17%  Similarity=0.261  Sum_probs=36.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRF   52 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   52 (167)
                      +.+|+++|+|+ ||.|++++..|.+.|+ +|.+.+|+.++.+++
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            46889999998 7999999999999999 899999998765543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.72  E-value=0.0018  Score=48.89  Aligned_cols=39  Identities=13%  Similarity=0.201  Sum_probs=34.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      +++|+|++|++|...++.+...|++|+++++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999888999999999987776544

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.67  E-value=0.013  Score=43.64  Aligned_cols=84  Identities=17%  Similarity=0.213  Sum_probs=56.8

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH-------HHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE-------IAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++.|.|. |.+|..+++.|++.|++|++.+|++++.+++.+.       +......++  +..-+.++..++.+++++.
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDv--vi~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADL--IHITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSE--EEECCSSHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCE--EEEECCChHHHHHHHHHHH
Confidence            45777775 8999999999999999999999998876655431       111011233  3344556677888887776


Q ss_pred             -hcCCccEEEEcCCC
Q 031016           86 -SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 -~~~~i~~lv~~ag~   99 (167)
                       ...+=.++|+....
T Consensus        93 ~~l~~g~ivv~~st~  107 (296)
T 3qha_A           93 GHAKPGTVIAIHSTI  107 (296)
T ss_dssp             TTCCTTCEEEECSCC
T ss_pred             HhcCCCCEEEEeCCC
Confidence             44455667766644

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.65  E-value=0.012  Score=44.50  Aligned_cols=114  Identities=16%  Similarity=0.049  Sum_probs=65.6

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+.|+|+ |.+|..++..|+.+|.  .|++++.++++++.....+....  ..++.+..   ++.+          .+.
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~~~----------a~~   73 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDYS----------DVK   73 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----------GGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CCHH----------HhC
Confidence            35888898 9999999999999986  89999998766554444443311  11222111   1211          124


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      .-|++|.++|.    +..+-  .+.   .+.+..|+.-...+.+.+.+.   .+.+.++++|-.
T Consensus        74 ~aDvVii~~g~----p~k~g--~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNP  125 (318)
T 1y6j_A           74 DCDVIVVTAGA----NRKPG--ETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNP  125 (318)
T ss_dssp             TCSEEEECCCC------------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSS
T ss_pred             CCCEEEEcCCC----CCCCC--cCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCc
Confidence            67999999987    22221  222   345677776665555555544   235677776543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.64  E-value=0.01  Score=44.72  Aligned_cols=85  Identities=15%  Similarity=0.252  Sum_probs=55.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH-------HHhh-cCCcEEEEEeecCCHHHHHHHHH-
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE-------IARE-EKSQVFAIRIDCSDSRSVREAFE-   82 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~-~~~~~~~~~~D~~~~~~~~~~~~-   82 (167)
                      .+++.|.|. |.+|..+++.|++.|++|++.+|++++.+++.+.       +... ...++.+  .-+.++..++.++. 
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi--~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVV--SMLENGAVVQDVLFA  107 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEE--ECCSSHHHHHHHHTT
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEE--EECCCHHHHHHHHcc
Confidence            456778876 8999999999999999999999998877665421       1110 1233333  34455666776665 


Q ss_pred             -HHH-hcCCccEEEEcCCC
Q 031016           83 -GVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        83 -~~~-~~~~i~~lv~~ag~   99 (167)
                       .+. ...+-.++|+....
T Consensus       108 ~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             TCHHHHCCTTCEEEECSCC
T ss_pred             hhHHhhCCCCCEEEecCCC
Confidence             444 44445566666543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.59  E-value=0.015  Score=43.52  Aligned_cols=113  Identities=15%  Similarity=0.113  Sum_probs=63.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.|+|+ |.+|..++..|+.+|.  +|+++++++++++.....+....  .....+..   ++.+       .   ...
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-------a---~~~   67 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-------E---LAD   67 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-------G---GTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-------H---hCC
Confidence            4788998 9999999999999998  89999999876665444443211  01122211   1221       1   135


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      -|++|.+++.    +..+-     +.-.+.+..|+.-.-.+.+.+.+.   .+.+.++++|-.
T Consensus        68 aDvVIi~~~~----~~~~g-----~~r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP  118 (304)
T 2v6b_A           68 AQVVILTAGA----NQKPG-----ESRLDLLEKNADIFRELVPQITRA---APDAVLLVTSNP  118 (304)
T ss_dssp             CSEEEECC---------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSS
T ss_pred             CCEEEEcCCC----CCCCC-----CcHHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCc
Confidence            7999999986    22221     112234566666555555555443   134566665543

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.59  E-value=0.017  Score=43.59  Aligned_cols=114  Identities=15%  Similarity=0.071  Sum_probs=66.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.|+|+ |.+|..++..|+..|.  +|++.++++++++.....+....  .....+.   .++.+.    +      ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~~d~~~----~------~~   67 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---AGDYAD----L------KG   67 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---ECCGGG----G------TT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---eCCHHH----h------CC
Confidence            4778998 9999999999999998  99999999887776554443211  1111111   123221    1      35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      .|++|.+++.   .. .+  ..+..   +.+..|..-...+.+.+.+.-   +.+.+|++|-..
T Consensus        68 aDvViiav~~---~~-~~--g~~r~---dl~~~n~~i~~~i~~~i~~~~---~~~~ii~~tNp~  119 (319)
T 1a5z_A           68 SDVVIVAAGV---PQ-KP--GETRL---QLLGRNARVMKEIARNVSKYA---PDSIVIVVTNPV  119 (319)
T ss_dssp             CSEEEECCCC---CC-CS--SCCHH---HHHHHHHHHHHHHHHHHHHHC---TTCEEEECSSSH
T ss_pred             CCEEEEccCC---CC-CC--CCCHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEeCCcH
Confidence            7999999986   22 22  12222   334555554444444444332   235677765443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.58  E-value=0.016  Score=43.23  Aligned_cols=66  Identities=23%  Similarity=0.268  Sum_probs=44.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .+++.|.||.|.+|.++++.|.+.|++|++.+|+++..  ..+.+   ...++.++.+-..   .+..+++++.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~---~~aDvVilavp~~---~~~~vl~~l~   86 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESIL---ANADVVIVSVPIN---LTLETIERLK   86 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHH---TTCSEEEECSCGG---GHHHHHHHHG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHh---cCCCEEEEeCCHH---HHHHHHHHHH
Confidence            45688999889999999999999999999998876431  11111   2345555544332   3555555554

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.56  E-value=0.061  Score=40.49  Aligned_cols=114  Identities=10%  Similarity=0.040  Sum_probs=67.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      ..+.|+|+ |.+|..++..|+.+|.  .|++++.++++++.....+...   .+.++.+..   .+.+.          +
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---~~~~a----------~   72 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA---GEYSD----------C   72 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE---CCGGG----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe---CCHHH----------h
Confidence            45888898 9999999999999884  7999998877665433333321   112333222   22221          2


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      ..-|++|.++|.    +..+-  .+.+   +.+..|..-...+.+.+.+.   .+.+.++++|-.
T Consensus        73 ~~aDvVvi~ag~----~~~~g--~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNP  125 (317)
T 3d0o_A           73 HDADLVVICAGA----AQKPG--ETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNP  125 (317)
T ss_dssp             TTCSEEEECCCC----CCCTT--CCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSS
T ss_pred             CCCCEEEECCCC----CCCCC--CcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCc
Confidence            367999999987    22222  2332   34566666544444444433   235677776543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.56  E-value=0.008  Score=45.09  Aligned_cols=86  Identities=15%  Similarity=0.190  Sum_probs=54.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH-------HHh-hcCCcEEEEEeecCCHHHHHHHH-
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE-------IAR-EEKSQVFAIRIDCSDSRSVREAF-   81 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~D~~~~~~~~~~~-   81 (167)
                      ...++.|.|. |.+|..+++.|++.|++|++.+|++++.+++.+.       +.. ....++.  ..-+.++..++.++ 
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvv--i~~vp~~~~~~~v~~   96 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYT--IAMLSDPCAALSVVF   96 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEE--EECCSSHHHHHHHHH
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEE--EEEcCCHHHHHHHHh
Confidence            3456778875 8999999999999999999999998876655421       000 0112333  33444566677666 


Q ss_pred             --HHHH-hcCCccEEEEcCCC
Q 031016           82 --EGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        82 --~~~~-~~~~i~~lv~~ag~   99 (167)
                        +++. ...+=.++|++...
T Consensus        97 ~~~~l~~~l~~g~~vv~~st~  117 (310)
T 3doj_A           97 DKGGVLEQICEGKGYIDMSTV  117 (310)
T ss_dssp             STTCGGGGCCTTCEEEECSCC
T ss_pred             CchhhhhccCCCCEEEECCCC
Confidence              5444 33344566666543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.56  E-value=0.0051  Score=45.48  Aligned_cols=45  Identities=16%  Similarity=0.295  Sum_probs=39.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEI   56 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   56 (167)
                      .++.++|.|+ ||.|++++..|.+.|+ +|.+..|+.++.+++.+.+
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678999997 7999999999999997 7999999998888777654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.55  E-value=0.012  Score=44.54  Aligned_cols=39  Identities=13%  Similarity=0.093  Sum_probs=31.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeE-EEEecChhhHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTV-AILARDLGRLS   50 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v-~~~~r~~~~~~   50 (167)
                      .+++++|.|+ |++|...++.+...|+++ +++++++++++
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~  199 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLA  199 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHH
Confidence            5789999987 899999999888899865 56677776654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.54  E-value=0.035  Score=41.86  Aligned_cols=113  Identities=17%  Similarity=0.111  Sum_probs=66.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.|+|+ |.+|..++..++.+|.  .|+++++++++++....++...   ...+......|  +.+.          +..
T Consensus         3 v~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~a----------~~~   69 (314)
T 3nep_X            3 VTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYGP----------TED   69 (314)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSGG----------GTT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHHH----------hCC
Confidence            678897 9999999999999886  8999999887765443334321   12222222111  2211          235


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~  153 (167)
                      -|++|.++|.    +..|-  .   +-.+.++.|..-.    +.+.+.+.+. +.+.++++|-.+
T Consensus        70 aDvVii~ag~----~~kpG--~---~R~dl~~~N~~i~----~~i~~~i~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           70 SDVCIITAGL----PRSPG--M---SRDDLLAKNTEIV----GGVTEQFVEGSPDSTIIVVANPL  121 (314)
T ss_dssp             CSEEEECCCC----------------CHHHHHHHHHHH----HHHHHHHHTTCTTCEEEECCSSH
T ss_pred             CCEEEECCCC----CCCCC--C---CHHHHHHhhHHHH----HHHHHHHHHhCCCcEEEecCCch
Confidence            7999999997    22222  1   2334567776644    4444444443 357888877543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.53  E-value=0.0023  Score=48.47  Aligned_cols=81  Identities=11%  Similarity=0.055  Sum_probs=53.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEE-EEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVF-AIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.++.++|.|++.-+|+.+++.|++.|++|.+.+|+..+..+..+.    .....+ ...+..++++++++.+.+    
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~----la~~~~~~t~~~~t~~~~L~e~l~~----  245 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGES----LKLNKHHVEDLGEYSEDLLKKCSLD----  245 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCC----SSCCCCEEEEEEECCHHHHHHHHHH----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHH----HhhhcccccccccccHhHHHHHhcc----
Confidence            56899999999987789999999999999999888763221111011    111111 111122445677766665    


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                        -|++|.+.|.
T Consensus       246 --ADIVIsAtg~  255 (320)
T 1edz_A          246 --SDVVITGVPS  255 (320)
T ss_dssp             --CSEEEECCCC
T ss_pred             --CCEEEECCCC
Confidence              4888888876

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.52  E-value=0.0052  Score=45.68  Aligned_cols=42  Identities=26%  Similarity=0.280  Sum_probs=36.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      .+.||.++|+|.++-+|+.++..|.++|++|.+..+....++
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~  198 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS  198 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            468999999999988999999999999999988877655444

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.51  E-value=0.083  Score=39.61  Aligned_cols=72  Identities=17%  Similarity=0.142  Sum_probs=49.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---c--CCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---E--KSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ..+.|+|+ |.+|..++..|+.+|. +|++++.++++++.....+...   .  ..++...    +|.+.    +     
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t----~d~~a----~-----   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT----NNYAD----T-----   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE----SCGGG----G-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC----CCHHH----H-----
Confidence            35889999 9999999999999996 8888998887766544444331   1  1222211    22211    1     


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                       ..-|++|.++|.
T Consensus        69 -~~aD~Vi~a~g~   80 (309)
T 1ur5_A           69 -ANSDVIVVTSGA   80 (309)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -CCCCEEEEcCCC
Confidence             357999999987

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.48  E-value=0.0072  Score=45.13  Aligned_cols=42  Identities=33%  Similarity=0.442  Sum_probs=36.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      .+.+++++|.|+ |.+|+++++.+...|++|++.+|+.++.+.
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            467999999997 899999999999999999999998765443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.48  E-value=0.0073  Score=44.64  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=36.2

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      .++.|.|++|.+|.++++.|.+.|++|++.+|+++..+++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            46899999999999999999999999999999887766554

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.47  E-value=0.0074  Score=44.61  Aligned_cols=43  Identities=19%  Similarity=0.344  Sum_probs=36.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      +.||.++|.|.++-+|+.+++.|.+.|++|.+..+....+++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~  190 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM  190 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh
Confidence            5799999999998999999999999999999887755444433

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.46  E-value=0.013  Score=43.94  Aligned_cols=43  Identities=21%  Similarity=0.359  Sum_probs=35.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD   54 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   54 (167)
                      ..+++.|.|. |.+|..+++.|++.|++|++.+|++++.+++.+
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~   50 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA   50 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            3455777775 899999999999999999999999887766543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.43  E-value=0.054  Score=40.68  Aligned_cols=114  Identities=14%  Similarity=0.073  Sum_probs=69.6

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.|+|+ |.+|..++..|+.++  ..|++.+.++++++.....+....  ..++.+..   .+.+.    +      ..
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~---~~~~a----~------~~   67 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA---GSYGD----L------EG   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE---CCGGG----G------TT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE---CCHHH----h------CC
Confidence            4789998 999999999999987  479999999887776555554311  12222222   22221    2      35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      -|++|..+|.    +..+-  .+..   +.+..|..-...+.+.+...   .+.+.++++|-.+
T Consensus        68 aD~Vii~ag~----~~~~g--~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  119 (310)
T 2xxj_A           68 ARAVVLAAGV----AQRPG--ETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPV  119 (310)
T ss_dssp             EEEEEECCCC----CCCTT--CCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             CCEEEECCCC----CCCCC--cCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence            7999999987    33332  2333   34556655444444443332   2357888876543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.42  E-value=0.0091  Score=44.52  Aligned_cols=40  Identities=23%  Similarity=0.260  Sum_probs=35.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+.|.|+ |.+|..++..|++.|++|++.+++++.+++.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            466889998 8999999999999999999999998776654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.42  E-value=0.2  Score=37.98  Aligned_cols=118  Identities=9%  Similarity=-0.072  Sum_probs=71.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ..+.+.|+|+ |.+|..++..++.+|.  .|++++.+++.++.....+...  ..........  +|.+          .
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t--~d~~----------~   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG--KDYS----------V   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE--SSSC----------S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc--CCHH----------H
Confidence            3467899999 9999999999999986  8999999887766555445431  1111111111  1211          1


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +..-|++|.++|.    +..|-  .+.   .+.+..|..-.-.+.+.+.+.   .+.+.++++|-.+
T Consensus        87 ~~daDiVIitaG~----p~kpG--~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 SAGSKLVVITAGA----RQQEG--ESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG  141 (330)
T ss_dssp             CSSCSEEEECCSC----CCCSS--CCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             hCCCCEEEEeCCC----CCCCC--CCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence            2357999999997    33332  222   235666665444444444333   2356788877543

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.41  E-value=0.025  Score=46.35  Aligned_cols=60  Identities=12%  Similarity=0.170  Sum_probs=43.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh-------------------hhHHHHHHHHHhhcCC--cEEEE
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL-------------------GRLSRFADEIAREEKS--QVFAI   67 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~--~~~~~   67 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.++. .+.  ++..+
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~-iNP~V~v~~~  401 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMDATGV  401 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHH-HCTTCEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHh-hCCCcEEEEe
Confidence            35788999999 7999999999999997 788887742                   456667777766 443  44444


Q ss_pred             Eeec
Q 031016           68 RIDC   71 (167)
Q Consensus        68 ~~D~   71 (167)
                      ..++
T Consensus       402 ~~~I  405 (615)
T 4gsl_A          402 KLSI  405 (615)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            4333

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.41  E-value=0.085  Score=40.41  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=35.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD   54 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   54 (167)
                      ...+.|.|+ |.+|.+++..|++.|++|.+.+|+++..+.+.+
T Consensus        29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~   70 (356)
T 3k96_A           29 KHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQA   70 (356)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            445888887 899999999999999999999999887766554

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.41  E-value=0.014  Score=44.12  Aligned_cols=39  Identities=18%  Similarity=0.178  Sum_probs=31.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLS   50 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~   50 (167)
                      .+.+++|.|+ |++|...+..+... |++|+++++++++++
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~  202 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLN  202 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHH
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhh
Confidence            4789999987 78888888777765 679999999887654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.39  E-value=0.012  Score=43.59  Aligned_cols=84  Identities=20%  Similarity=0.234  Sum_probs=54.2

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH-------HHhh-cCCcEEEEEeecCCHHHHHHHH---
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE-------IARE-EKSQVFAIRIDCSDSRSVREAF---   81 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~-~~~~~~~~~~D~~~~~~~~~~~---   81 (167)
                      +++.|.|+ |.+|..+++.|++.|++|++.+|++++.+++.+.       +... ...++.+  .-+.++..++.++   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi--~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTF--AMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEE--EEcCCHHHHHHHHcCc
Confidence            35778886 8999999999999999999999998876655431       0000 1223333  3445566777777   


Q ss_pred             HHHH-hcCCccEEEEcCCC
Q 031016           82 EGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        82 ~~~~-~~~~i~~lv~~ag~   99 (167)
                      +++. ...+=.++|+....
T Consensus        79 ~~l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             TCHHHHCCTTCEEEECSCC
T ss_pred             chHhhcCCCCCEEEeCCCC
Confidence            5554 34444566666543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.37  E-value=0.023  Score=46.44  Aligned_cols=59  Identities=12%  Similarity=0.175  Sum_probs=43.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC-------------------hhhHHHHHHHHHhhcCC--cEEEE
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD-------------------LGRLSRFADEIAREEKS--QVFAI   67 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~--~~~~~   67 (167)
                      +.++.++|.|+ ||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.++. .+.  ++..+
T Consensus       325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~-iNP~v~v~~~  402 (598)
T 3vh1_A          325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMDATGV  402 (598)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHH-HCTTCEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHh-HCCCcEEEEE
Confidence            35688999998 7999999999999997 78888654                   2466777777776 333  44544


Q ss_pred             Eee
Q 031016           68 RID   70 (167)
Q Consensus        68 ~~D   70 (167)
                      ..+
T Consensus       403 ~~~  405 (598)
T 3vh1_A          403 KLS  405 (598)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            444

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.35  E-value=0.079  Score=39.71  Aligned_cols=115  Identities=10%  Similarity=0.055  Sum_probs=69.1

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.|+|+ |.+|..++..|+++  |.+|++.++++++++.....+...   ......+..  .+|.++    +      .
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~~~----l------~   68 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SNDYAD----T------A   68 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESCGGG----G------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCCHHH----H------C
Confidence            3778898 99999999999985  689999999987776544333220   111111111  122221    1      3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      .-|++|.+++.    +..+  ..+   -.+.++.|+.-...+.+.+.+..   +.+.+++++-..
T Consensus        69 ~aDvViiav~~----p~~~--g~~---r~dl~~~n~~i~~~i~~~i~~~~---~~~~viv~tNP~  121 (310)
T 1guz_A           69 NSDIVIITAGL----PRKP--GMT---REDLLMKNAGIVKEVTDNIMKHS---KNPIIIVVSNPL  121 (310)
T ss_dssp             TCSEEEECCSC----CCCT--TCC---HHHHHHHHHHHHHHHHHHHHHHC---SSCEEEECCSSH
T ss_pred             CCCEEEEeCCC----CCCC--CCC---HHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEEcCch
Confidence            57999999986    2222  112   23456677776656666655542   246777775433

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.32  E-value=0.14  Score=39.62  Aligned_cols=117  Identities=10%  Similarity=0.023  Sum_probs=68.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC--e---EEEEecC----hhhHHHHHHHHHhhcCC-cEEEEEeecCCHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY--T---VAILARD----LGRLSRFADEIAREEKS-QVFAIRIDCSDSRSVREAF   81 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~--~---v~~~~r~----~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~   81 (167)
                      ...+.|+||+|.+|.+++..++.++.  .   +++...+    .+.++...-+|.. ... -..  .+.+++. .    .
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h-~~~p~~~--~v~i~~~-~----y  103 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED-SLYPLLR--EVSIGID-P----Y  103 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTTEE--EEEEESC-H----H
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHh-hhhhhcC--CcEEecC-C----H
Confidence            45689999999999999999998764  2   6665443    2334444444443 111 111  1222221 1    1


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc--CCceEEEecCC
Q 031016           82 EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER--GKGTIIFTGCS  152 (167)
Q Consensus        82 ~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss~  152 (167)
                      +.   +..-|++|.++|.    +..|-  .+   -.+.++.|..    +++...+.+.+.  +.+.++++|..
T Consensus       104 ~~---~~daDvVVitag~----prkpG--~t---R~DLl~~N~~----I~k~i~~~i~~~a~p~~ivlVvsNP  160 (375)
T 7mdh_A          104 EV---FEDVDWALLIGAK----PRGPG--ME---RAALLDINGQ----IFADQGKALNAVASKNVKVLVVGNP  160 (375)
T ss_dssp             HH---TTTCSEEEECCCC----CCCTT--CC---HHHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             HH---hCCCCEEEEcCCC----CCCCC--CC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCc
Confidence            11   2467999999987    33332  23   3455777776    445555555552  45788887753

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.32  E-value=0.0098  Score=44.28  Aligned_cols=42  Identities=36%  Similarity=0.472  Sum_probs=36.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      .+.+++++|.|+ |.+|+.+++.+...|++|++.+|+.++.+.
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            457899999996 899999999999999999999998765443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.32  E-value=0.073  Score=39.73  Aligned_cols=111  Identities=13%  Similarity=0.007  Sum_probs=67.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.|+|+ |++|..++..|..++.  ++++++.+++..+--.-.|.+.   .+........  .|.+.       +   ..
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~-------~---~~   69 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-------L---KG   69 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG-------G---TT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH-------h---CC
Confidence            667796 9999999999998874  7999999876655444444321   2222222221  12221       1   35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      -|++|.+||.    +..|-  .+.+   +.++.|..    +.+.+.+.+.+.. .+.++.+|-
T Consensus        70 aDvVvitAG~----prkpG--mtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           70 SEIIVVTAGL----ARKPG--MTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CSEEEECCCC----CCCSS--SCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCEEEEecCC----CCCCC--CchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEecC
Confidence            7999999997    33433  3444   45777877    4455555555543 467776665

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.31  E-value=0.026  Score=43.51  Aligned_cols=71  Identities=24%  Similarity=0.299  Sum_probs=47.1

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016            1 MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus         1 ~~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      |.+|.. +.+.+|+++|.|++ .+|+.+++.+.+.|++|++++.++....       . .-.+ ..+..|..|.+.+.++
T Consensus         4 ~~~m~~-~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~~-------~-~~ad-~~~~~~~~d~~~l~~~   72 (389)
T 3q2o_A            4 MLDMTR-IILPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSPC-------A-QVAD-IEIVASYDDLKAIQHL   72 (389)
T ss_dssp             ---CCC-CCCTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCTT-------T-TTCS-EEEECCTTCHHHHHHH
T ss_pred             cccccc-cCCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCch-------H-HhCC-ceEecCcCCHHHHHHH
Confidence            345543 23478999999984 6999999999999999999987543210       0 1111 2345688888877776


Q ss_pred             HH
Q 031016           81 FE   82 (167)
Q Consensus        81 ~~   82 (167)
                      ++
T Consensus        73 ~~   74 (389)
T 3q2o_A           73 AE   74 (389)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.28  E-value=0.01  Score=44.08  Aligned_cols=43  Identities=26%  Similarity=0.261  Sum_probs=36.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR   51 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~   51 (167)
                      ++.||.++|.|.++-+|+.++..|.+.|++|.+..+....+++
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~  200 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD  200 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH
Confidence            4589999999999889999999999999999888765544443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.28  E-value=0.0039  Score=46.05  Aligned_cols=43  Identities=16%  Similarity=0.230  Sum_probs=36.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      +.+++++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+++.
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            45788999997 79999999999999999999999887665543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.24  E-value=0.029  Score=42.33  Aligned_cols=114  Identities=13%  Similarity=0.040  Sum_probs=67.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+.|+|+ |.+|..++..|+.++.  .|++++.++++++.....+...  ...++.+.. |  +.+.          +.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a----------~~   71 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD----------CK   71 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG----------GT
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH----------hC
Confidence            46899998 9999999999999875  7999999888777655555441  112222221 1  2211          24


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSA  153 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~  153 (167)
                      .-|++|.++|.    +..+-  .+   -.+.+..|..-.    +.+.+.+.+. +.+.++++|-.+
T Consensus        72 ~aDvVii~ag~----~~~~g--~~---R~dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~tNPv  124 (318)
T 1ez4_A           72 DADLVVITAGA----PQKPG--ES---RLDLVNKNLNIL----SSIVKPVVDSGFDGIFLVAANPV  124 (318)
T ss_dssp             TCSEEEECCCC-------------------CHHHHHHHH----HHHHHHHHHTTCCSEEEECSSSH
T ss_pred             CCCEEEECCCC----CCCCC--CC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEeCCcH
Confidence            67999999987    22222  11   223455555544    4444444443 357888876543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.22  E-value=0.11  Score=39.21  Aligned_cols=72  Identities=13%  Similarity=0.089  Sum_probs=49.2

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---c--CCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---E--KSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +.+.|+|+ |.+|..++..|+.+|. +|++.+.++++++.....+...   .  ..++...    +|.+.    +     
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~a----l-----   70 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NTYDD----L-----   70 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CCGGG----G-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CCHHH----h-----
Confidence            35888898 9999999999999998 8999999887776544444321   1  1222211    22211    1     


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                       ..-|++|.++|.
T Consensus        71 -~~aD~Vi~a~g~   82 (322)
T 1t2d_A           71 -AGADVVIVTAGF   82 (322)
T ss_dssp             -TTCSEEEECCSC
T ss_pred             -CCCCEEEEeCCC
Confidence             357999999987

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.21  E-value=0.0098  Score=43.48  Aligned_cols=45  Identities=24%  Similarity=0.300  Sum_probs=38.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI   56 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   56 (167)
                      +.+ +++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+++.+.+
T Consensus       115 l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          115 LKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            457 8999997 78999999999999999999999988777666543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.19  E-value=0.043  Score=39.91  Aligned_cols=83  Identities=16%  Similarity=0.317  Sum_probs=54.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecChhhHHHHHHHHHhh---------cCCcEEEEEeecCCHHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYT-VAILARDLGRLSRFADEIARE---------EKSQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~---------~~~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      ..+.|.|+ |.+|..+++.|.+.|++ |.+.+|++++.+++.+.+...         ...++.++   .+.+..++++++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~---av~~~~~~~v~~   86 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV---SLKDSAFAELLQ   86 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE---CCCHHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE---ecCHHHHHHHHH
Confidence            35888887 89999999999999998 788899988877665542100         11122222   223445677777


Q ss_pred             HHH-hcCCccEEEEcCCC
Q 031016           83 GVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        83 ~~~-~~~~i~~lv~~ag~   99 (167)
                      ++. ...+=.++|++.+.
T Consensus        87 ~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           87 GIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHTTCCTTCEEEECCTT
T ss_pred             HHHhhcCCCcEEEECCCC
Confidence            776 34344567777654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.17  E-value=0.015  Score=43.58  Aligned_cols=39  Identities=21%  Similarity=0.247  Sum_probs=34.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      ++.||.++|.|.++-+|+.+++.|.+.|++|.+..|...
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            468999999999888999999999999999988877444

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.16  E-value=0.019  Score=44.02  Aligned_cols=34  Identities=18%  Similarity=0.389  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      .++.++|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCC
Confidence            4678999998 7999999999999997 78888775

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.15  E-value=0.016  Score=43.71  Aligned_cols=62  Identities=13%  Similarity=0.163  Sum_probs=45.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH---------HHHHHHHHhhcCCcEEEEEeecCC
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL---------SRFADEIAREEKSQVFAIRIDCSD   73 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~---------~~~~~~l~~~~~~~~~~~~~D~~~   73 (167)
                      ..+.+|++.|.|. |.||+++++.+...|++|+..+|++...         ..+.+.+   ...++.++.+.++.
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell---~~aDiV~l~~Plt~  205 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFL---NQTRVLINLLPNTA  205 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHH---HTCSEEEECCCCCG
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHH---hhCCEEEEecCCch
Confidence            4567999999998 7999999999999999999998865421         2222333   24577777776664

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.15  E-value=0.038  Score=40.20  Aligned_cols=77  Identities=17%  Similarity=0.202  Sum_probs=54.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      .+.|.|++|.+|+.+++.+.+. +++|+......+.++++..     ...+   +.+|+|.++.....+..+.+ -++++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-----~~~D---vvIDfT~p~a~~~~~~~a~~-~g~~~   72 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-----GNTE---VVIDFTHPDVVMGNLEFLID-NGIHA   72 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-----TTCC---EEEECSCTTTHHHHHHHHHH-TTCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-----cCCc---EEEEccChHHHHHHHHHHHH-cCCCE
Confidence            3889999999999999999876 8888766443333333221     1223   55799999988887777653 24788


Q ss_pred             EEEcCCC
Q 031016           93 LVYNAYQ   99 (167)
Q Consensus        93 lv~~ag~   99 (167)
                      ++-+.|.
T Consensus        73 VigTTG~   79 (245)
T 1p9l_A           73 VVGTTGF   79 (245)
T ss_dssp             EECCCCC
T ss_pred             EEcCCCC
Confidence            8877775

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.14  E-value=0.11  Score=41.30  Aligned_cols=77  Identities=17%  Similarity=0.125  Sum_probs=48.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHc-----CCeEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHE-----GYTVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~-----g~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      ...+.|.||++..+.+++..|+.+     +.+|++.++++++++...+.....   .+....+...  +|   .++.+. 
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t--~D---~~eal~-  101 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAFT-  101 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHHS-
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE--CC---HHHHHc-
Confidence            446888899887788899889987     557999999988766543322211   2222222211  23   222222 


Q ss_pred             HHhcCCccEEEEcCCC
Q 031016           84 VLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~   99 (167)
                           .-|++|.+++.
T Consensus       102 -----~AD~VViaag~  112 (472)
T 1u8x_X          102 -----DVDFVMAHIRV  112 (472)
T ss_dssp             -----SCSEEEECCCT
T ss_pred             -----CCCEEEEcCCC
Confidence                 57999999987

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.14  E-value=0.021  Score=43.94  Aligned_cols=68  Identities=16%  Similarity=0.164  Sum_probs=49.1

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      ..+.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++....      .. ..  -..+..|..|.+.+.++++.
T Consensus         6 ~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~------~~-~a--d~~~~~~~~d~~~l~~~~~~   73 (377)
T 3orq_A            6 FNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC------RY-VA--HEFIQAKYDDEKALNQLGQK   73 (377)
T ss_dssp             CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT------GG-GS--SEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh------hh-hC--CEEEECCCCCHHHHHHHHHh
Confidence            334456899999997 68999999999999999999987654210      00 11  13456789998888877764

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.13  E-value=0.012  Score=43.78  Aligned_cols=41  Identities=20%  Similarity=0.240  Sum_probs=35.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL   49 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~   49 (167)
                      .+.||.++|.|.++-+|+.+++.|.++|++|.+..+....+
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  198 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL  198 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            46899999999988899999999999999998877654433

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.12  E-value=0.0063  Score=46.06  Aligned_cols=59  Identities=12%  Similarity=0.031  Sum_probs=46.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      .+.++|.|. |.+|+.+++.|.++|. |++++++++..+ +.+       ..+.++..|.++++.++++
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~~L~~a  173 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------SGANFVHGDPTRVSDLEKA  173 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------TTCEEEESCTTSHHHHHHT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCHHHHHhc
Confidence            456899997 8999999999999999 999999887765 321       2466778888888776643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	167
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-21
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-21
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-20
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	8e-20
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-19
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-18
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-18
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	9e-18
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-17
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-17
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	8e-17
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-16
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-16
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-16
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-16
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-16
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-16
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-16
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-16
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	6e-16
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-16
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-15
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-15
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-15
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-14
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	8e-14
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-14
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-13
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-13
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-13
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-13
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-13
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-13
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-13
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	9e-13
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-12
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-12
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-12
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-12
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-12
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	6e-12
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-11
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-11
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-11
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-11
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-11
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	7e-11
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-10
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-10
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-10
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	9e-10
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-09
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-09
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-08
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-07
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-07
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-06
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-06
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	8e-06
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-05
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-04
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-04
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	0.002
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	0.003

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 3e-21
 Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 5/150 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  I G G  +GR  A +FA     + +   +   L   A +  +   ++V    +DCS+
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC-KGLGAKVHTFVVDCSN 67

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              +  + + V + +G V +LV NA        ++         +K+  ++ L  F   +
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNNAGVV---YTSDLFATQDPQIEKTFEVNVLAHFWTTK 124

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             L  M +   G I+    +A    +    
Sbjct: 125 AFLPAMTKNNHGHIVTVASAAGHVSVPFLL 154

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (208), Expect = 5e-21
 Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 7/151 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI-AREEKSQVFAIRIDCS 72
           +A + G    +G ++AR    +G  V   AR +G +   A E  +      +   R D S
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           +   +   F  + S    V++ + NA      +P      S   ++    ++ L   +C 
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAG---LARPDTLLSGSTSGWKDMFNVNVLALSICT 128

Query: 132 QQVLSGMVERG--KGTIIFTGCSASLNGIAG 160
           ++    M ER    G II     +    +  
Sbjct: 129 REAYQSMKERNVDDGHIININSMSGHRVLPL 159

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 81.5 bits (201), Expect = 4e-20
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 7/150 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +GR+IA +FA EG  +AI           A+   R    +V  ++ D S 
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE---AEAAIRNLGRRVLTVKCDVSQ 63

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V    + V+S  G  ++LV NA     +    F E++F+ ++K+  I+    FL A+
Sbjct: 64  PGDVEAFGKQVISTFGRCDILVNNAG---IYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             + GM   G G II    +     I  ++
Sbjct: 121 AFVPGMKRNGWGRIINLTSTTYWLKIEAYT 150

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 81.2 bits (200), Expect = 8e-20
 Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 4/153 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS--QVFAIRIDC 71
              I G    +GR+ A  FA EG  V I  R   RL      I +   S  QV ++  D 
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
           +      +     L   G ++VLV NA         T  T+   D + K++ ++      
Sbjct: 67  TTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIE 126

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             ++V   +V      +  +   A       F 
Sbjct: 127 MTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFL 159

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 79.6 bits (196), Expect = 3e-19
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 9/149 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  + +    EG  VA    +         ++A E   +   +R D S 
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG----QQLAAELGERSMFVRHDVSS 63

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
                     V   LG + VLV NA       P +      + F + + I++   F+  Q
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAG---ILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
           Q ++ M E G G+II     +S   I  +
Sbjct: 121 QGIAAMKETG-GSIINMASVSSWLPIEQY 148

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 78.1 bits (192), Expect = 1e-18
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 4/153 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDC 71
           +A I G    +GR+ A  FA EG  V I  R   RL     +I      +  V ++  D 
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 66

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNA-YQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
           +      E     L   G +++LV NA       Q    T  S +S+  ++ ++      
Sbjct: 67  TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 126

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             ++ +  +       +  +  ++ L+    F 
Sbjct: 127 LTKKAVPHLSSTKGEIVNISSIASGLHATPDFP 159

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 78.2 bits (192), Expect = 1e-18
 Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 4/149 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +G + A+ F   G  V I         +  + I   +   +  +  D + 
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV--ISFVHCDVTK 65

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              VR   +  ++  G ++++  N    +S  P +  E   + F++ + I+  GAFL A+
Sbjct: 66  DEDVRNLVDTTIAKHGKLDIMFGNVG-VLSTTPYSILEAGNEDFKRVMDINVYGAFLVAK 124

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGF 161
                M+   KG+I+FT   +S     G 
Sbjct: 125 HAARVMIPAKKGSIVFTASISSFTAGEGV 153

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 75.4 bits (185), Expect = 9e-18
 Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 7/151 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    +G +IA KF  EG  V I  R      + A  +   ++  +   + D SD
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ--IQFFQHDSSD 65

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
                + F+      G V  LV NA         +  E +   ++K +A++  G F   +
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLVNNAGI---AVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122

Query: 133 QVLSGMVERGKG-TIIFTGCSASLNGIAGFS 162
             +  M  +G G +II         G     
Sbjct: 123 LGIQRMKNKGLGASIINMSSIEGFVGDPSLG 153

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.0 bits (184), Expect = 3e-17
 Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 9/155 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARD-----LGRLSRFADEIAREEKSQVFAIR 68
           +  + G G  LGR+ A  FA  G  V +         +G+ S  AD++  E + +     
Sbjct: 9   VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

Query: 69  IDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
            +     +  +  +  L   G ++V+V NA      +  +F+ IS + +     +   G+
Sbjct: 69  ANYDSVEAGEKLVKTALDTFGRIDVVVNNAG---ILRDRSFSRISDEDWDIIQRVHLRGS 125

Query: 128 FLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           F   +     M ++  G II T  ++ + G  G +
Sbjct: 126 FQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQA 160

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (181), Expect = 3e-17
 Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 9/150 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  + G G  +G  I R F + G  V I  +D         E+          I  D + 
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG-----AVFILCDVTQ 62

Query: 74  SRSVREAFEGVLSLGF-VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V+      +     ++ +V NA       P    E S   F++ + ++ LG +   +
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVVNNAGH--HPPPQRPEETSAQGFRQLLELNLLGTYTLTK 120

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
             L  +  + +G +I         G A   
Sbjct: 121 LALPYL-RKSQGNVINISSLVGAIGQAQAV 149

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 8e-17
 Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 8/144 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE----EKSQVFAIRI 69
           +A + G    +G++I ++    G  V I +R L RL   ADE+       ++++V  I+ 
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 73

Query: 70  DCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAF 128
           +  +   V    +  L   G +  LV N         +    IS   +   +  +  G F
Sbjct: 74  NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ---FLSPAEHISSKGWHAVLETNLTGTF 130

Query: 129 LCAQQVLSGMVERGKGTIIFTGCS 152
              + V S  ++   G+I+     
Sbjct: 131 YMCKAVYSSWMKEHGGSIVNIIVP 154

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 72.8 bits (178), Expect = 1e-16
 Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 4/152 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDC 71
              I G    +GRS A  FA EG  V I  R+  RL     +I +      ++ A+  D 
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 65

Query: 72  SDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
           +++    +     L+  G +++LV NA   +    T  T+   + +QK+  ++       
Sbjct: 66  TEASGQDDIINTTLAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEM 124

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            Q+    +++     +  +   A     +G+ 
Sbjct: 125 TQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYP 156

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 72.4 bits (177), Expect = 2e-16
 Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              I G    LGR++  +F  EG  VA+L +   RL     E+  +    V  I  D   
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERL----AELETDHGDNVLGIVGDVRS 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNA--YQPVSWQPTNFTEISFDSFQKSIAISSLGAFLC 130
               ++A    ++  G ++ L+ NA  +   +       E    +F +   I+  G    
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 131 AQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            +  L  +V    G +IFT  +A      G  
Sbjct: 123 VKACLPALVASR-GNVIFTISNAGFYPNGGGP 153

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 71.8 bits (176), Expect = 2e-16
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 11/150 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +GR+IA+ FA EG  VA+             E+A          ++D  D
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----GKEVAEAIGGA--FFQVDLED 59

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            R      E     LG V+VLV NA       P +   +    +++ + ++       + 
Sbjct: 60  ERERVRFVEEAAYALGRVDVLVNNAAIA---APGSALTVRLPEWRRVLEVNLTAPMHLSA 116

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
                M + G G I+       L      +
Sbjct: 117 LAAREMRKVGGGAIVNVASVQGLFAEQENA 146

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 71.9 bits (176), Expect = 2e-16
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 8/144 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              I G    LG   AR+    G  V +               ARE         +D + 
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----AATARELGDAARYQHLDVTI 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               +          G V+ LV NA              S + F+K + I+  G F+  +
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGI---STGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 133 QVLSGMVERGKGTIIFTGCSASLN 156
            V+  M + G G+I+    +A L 
Sbjct: 120 TVIPAMKDAGGGSIVNISSAAGLM 143

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 71.6 bits (175), Expect = 2e-16
 Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 6/146 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +G +I  +FA  G  +   AR+   L+    +  +++  QV     D S 
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW-QKKGFQVTGSVCDASL 68

Query: 74  SRSVREAFEGVLSL--GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
                +  + V S+  G +++L+ N     + +     + + + F   I+ +   A+  +
Sbjct: 69  RPEREKLMQTVSSMFGGKLDILINNLG---AIRSKPTLDYTAEDFSFHISTNLESAYHLS 125

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNG 157
           Q     +   G G IIF    A +  
Sbjct: 126 QLAHPLLKASGCGNIIFMSSIAGVVS 151

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 71.3 bits (174), Expect = 4e-16
 Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 4/135 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +G +  R  A  G  VA++ R         +++ +E   +  A + D S+
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           +  V +  + + + LG +  L+ NA   V       TE++ + F     ++  G F   +
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVK---PATELTHEDFAFVYDVNVFGVFNTCR 127

Query: 133 QVLSGMVERGKGTII 147
            V    +++ +   I
Sbjct: 128 AVAKLWLQKQQKGSI 142

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 5e-16
 Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 12/149 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G G  +GR   +     G  V  ++R    L     E        +  + +D  D
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGD 63

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             +   A     S+G V++LV NA          F E++ ++F +S  ++       +Q 
Sbjct: 64  WEATERALG---SVGPVDLLVNNAAV---ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQI 117

Query: 134 VLSGMVERGKG-TIIFTGCSASLNGIAGF 161
           V  G++ RG    I+      S   +   
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAVTNH 146

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 5e-16
 Identities = 31/154 (20%), Positives = 61/154 (39%), Gaps = 16/154 (10%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCS 72
           +A + G    +GR+ A     +G  VA++  +L    +    +  + E  +   I+ D +
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D + +R+ F  V+   G +++LV NA                  ++K++ I+ +      
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN-----------WEKTLQINLVSVISGT 113

Query: 132 QQVLSGMVERGK---GTIIFTGCSASLNGIAGFS 162
              L  M ++     G II     A L  +A   
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQP 147

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 6e-16
 Identities = 21/149 (14%), Positives = 44/149 (29%), Gaps = 3/149 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +GR +A   A  G  V + AR    L +          +    I     D
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 75

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
                +       L     ++   +  ++    N         +KS+ ++ L   +    
Sbjct: 76  MTFAEQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVA 133

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            L  + ++  G+I+     A        +
Sbjct: 134 ALPML-KQSNGSIVVVSSLAGKVAYPMVA 161

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.0 bits (171), Expect = 8e-16
 Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 12/150 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G G  +GR   +     G  V  + R    L   A E        +  + +D  D
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGD 61

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             +  +A  G   +G V++LV NA          F E++ ++F +S +++    F  +Q 
Sbjct: 62  WDATEKALGG---IGPVDLLVNNAALV---IMQPFLEVTKEAFDRSFSVNLRSVFQVSQM 115

Query: 134 VLSGMVER-GKGTIIFTGCSASLNGIAGFS 162
           V   M+ R   G+I+      +        
Sbjct: 116 VARDMINRGVPGSIVNVSSMVAHVTFPNLI 145

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 2e-15
 Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 8/154 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +A + G    +G +I R         V + ARD+ R      ++ + E       ++D  
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL-QAEGLSPRFHQLDID 63

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D +S+R   + +    G ++VLV NA                   + ++  +  G     
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAG---IAFKVADPTPFHIQAEVTMKTNFFGTRDVC 120

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
            ++L  +  + +G ++      S+  +   S   
Sbjct: 121 TELLPLI--KPQGRVVNVSSIMSVRALKSCSPEL 152

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 69.0 bits (168), Expect = 2e-15
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDLGRLSRFADEIAREEKSQVFA 66
           I  I G G  +GR+IA +FA            + + +R    L + + E  R E +    
Sbjct: 3   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC-RAEGALTDT 61

Query: 67  IRIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSL 125
           I  D SD   VR     ++   G ++ LV NA      +    ++++ + F  ++  +  
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGV---GRFGALSDLTEEDFDYTMNTNLK 118

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           G F   Q + + M  +  G I F    A+       S
Sbjct: 119 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSS 155

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 67.4 bits (164), Expect = 7e-15
 Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 4/150 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +  + G    +G++IA      G  V +  AR        + +I      Q      D S
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYGGQAITFGGDVS 61

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               V    +  +       +          + T    +    + + I ++  G FLC Q
Sbjct: 62  KEADVEAMMKTAID--AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
                M+++ KG II       L G  G +
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQA 149

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 67.0 bits (163), Expect = 1e-14
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 3/149 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G G  +GR IA+  A     V  ++R         DEI +    +      D S 
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYESSGYAGDVSK 70

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
              + E    +L+    + +          +   F  +  D ++  +  +    F   Q 
Sbjct: 71  KEEISEVINKILT--EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQP 128

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +   M+    G II       L G  G +
Sbjct: 129 ISKRMINNRYGRIINISSIVGLTGNVGQA 157

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 64.7 bits (157), Expect = 8e-14
 Identities = 18/153 (11%), Positives = 40/153 (26%), Gaps = 14/153 (9%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
               V     +G   +R+         ++   +   +  A+  A   K  +     D + 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 74  SR-SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
                ++  + +              + V         +     +++IAI+  G      
Sbjct: 67  PVAESKKLLKKIFD----------QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTT 116

Query: 133 QVLSGMVER---GKGTIIFTGCSASLNGIAGFS 162
            +L    +R     G I         N I    
Sbjct: 117 AILDFWDKRKGGPGGIIANICSVTGFNAIHQVP 149

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 64.6 bits (157), Expect = 9e-14
 Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 6/148 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G    +G  I  + A  G +V   +R+   L+    +  R +  +V A   D S 
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW-RSKGFKVEASVCDLSS 68

Query: 74  SRSVREAFEGVLS--LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
               +E    V +   G + +LV NA   +        + + + +   ++I+   A+  +
Sbjct: 69  RSERQELMNTVANHFHGKLNILVNNAGIVI---YKEAKDYTVEDYSLIMSINFEAAYHLS 125

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIA 159
                 +    +G ++F    +    + 
Sbjct: 126 VLAHPFLKASERGNVVFISSVSGALAVP 153

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 64.7 bits (157), Expect = 1e-13
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
          +A + G    LG  IA+  A  G +V + +R+L   S  A ++  +   +  A R D S+
Sbjct: 7  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 66

Query: 74 SRSVREAFEGVLS-LGFVEVLVYNA 97
             V++  E V    G ++ +V  A
Sbjct: 67 YEEVKKLLEAVKEKFGKLDTVVNAA 91

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 4/151 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCS 72
           +  I G G  LGR+ A + A EG  ++++      L      +      ++V     D S
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
           D   V           G ++    NA      +       +   F K ++I+  G FL  
Sbjct: 66  DEAQVEAYVTATTERFGRIDGFFNNAGI--EGKQNPTESFTAAEFDKVVSINLRGVFLGL 123

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           ++VL  M E+G G ++ T     + GI   S
Sbjct: 124 EKVLKIMREQGSGMVVNTASVGGIRGIGNQS 154

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G  IAR+   EG  V + AR    L     E+ RE   +      D   
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL-REAGVEADGRTCDVRS 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              +      V+   G V+VLV NA +          E++ + +   +  +  G F   +
Sbjct: 63  VPEIEALVAAVVERYGPVDVLVNNAGR---PGGGATAELADELWLDVVETNLTGVFRVTK 119

Query: 133 QVLSGMVERGKGTIIFTGCS 152
           QVL       +GT      +
Sbjct: 120 QVLKAGGMLERGTGRIVNIA 139

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 63.1 bits (153), Expect = 3e-13
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 10/140 (7%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A +  V    G   A + +  G+TVA       +                   ++     
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------YPQLKPMSE 55

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           +   E  E V S  G V+VLV N      +QP    + + + ++ ++    +  F     
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP--IDKYAVEDYRGAVEALQIRPFALVNA 113

Query: 134 VLSGMVERGKGTIIFTGCSA 153
           V S M +R  G IIF   + 
Sbjct: 114 VASQMKKRKSGHIIFITSAT 133

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.3 bits (153), Expect = 3e-13
 Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 9/148 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFA---HEGYTVAILARDLGRLSRFADEI-AREEKSQVFAIRI 69
           +  + G     GR++A + A     G  + + AR    L +  +E+ A++   +V     
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 70  DCSDSRSVREAFE-----GVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISS 124
           D      V+                  +L+ NA                       A++ 
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 125 LGAFLCAQQVLSGMVERGKGTIIFTGCS 152
                     L+   +    +      S
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNIS 155

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 62.7 bits (152), Expect = 4e-13
 Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 11/150 (7%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              I G    +GR+    FA EG  +     + G L   A+ +          + +D +D
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVAD 60

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             SV   F   L+ LG ++ +V+ A      +     ++  + ++  + ++  G+FL A+
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGI---TRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
                M E+  G+I+ T  S    G  G +
Sbjct: 118 AASEAMREKNPGSIVLTA-SRVYLGNLGQA 146

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 61.8 bits (149), Expect = 8e-13
 Identities = 18/134 (13%), Positives = 47/134 (35%), Gaps = 7/134 (5%)

Query: 17  IVGVGPNLGRSIARKFAHEGYTVAILA--RDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           + G    +G  + ++   +     I+A  RD+ +      E+   + S+V  + +  +  
Sbjct: 8   VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA----TELKSIKDSRVHVLPLTVTCD 63

Query: 75  RSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
           +S+      V   +G   + +      V       TE +     + + +++    L  Q+
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQK 123

Query: 134 VLSGMVERGKGTII 147
           +L  +         
Sbjct: 124 LLPLLKNAASKESG 137

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 62.1 bits (150), Expect = 9e-13
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 5/150 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A   G G  +GR IA +    G +V +      + +       ++  +Q  AI+ D S 
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 67

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V   F+  +S  G ++ ++ N+         +  E++ + F K   +++ G F  AQ
Sbjct: 68  PSEVVALFDKAVSHFGGLDFVMSNSG---MEVWCDELEVTQELFDKVFNLNTRGQFFVAQ 124

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           Q L      G+  I+ +  +A + GI   +
Sbjct: 125 QGLKHCRRGGRI-ILTSSIAAVMTGIPNHA 153

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 61.3 bits (148), Expect = 2e-12
 Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 6/151 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A + G    +G +I  + A  G  V   +R+   L    +   RE+   V     D   
Sbjct: 8   TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW-REKGLNVEGSVCDLLS 66

Query: 74  SRSVREAFEGVLSL--GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
                +  + V  +  G + +LV NA            + +   +   +  +   A+  +
Sbjct: 67  RTERDKLMQTVAHVFDGKLNILVNNAGV---VIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           Q     +     G +IF    A  + +   S
Sbjct: 124 QIAYPLLKASQNGNVIFLSSIAGFSALPSVS 154

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.5 bits (146), Expect = 3e-12
 Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 8/136 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A + G    +G S  R    EG  V             A E+A         + +D + 
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQ 63

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               + A +  ++  G + VLV NA            + +   +Q+ + ++  G FL  +
Sbjct: 64  PAQWKAAVDTAVTAFGGLHVLVNNAGI---LNIGTIEDYALTEWQRILDVNLTGVFLGIR 120

Query: 133 QVLSGMVERGKGTIIF 148
            V+  M E G+G+II 
Sbjct: 121 AVVKPMKEAGRGSIIN 136

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 60.5 bits (146), Expect = 3e-12
 Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 3/150 (2%)

Query: 4   MTSSGSSCRG-IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS 62
           +    +S  G +A + G G  +GR +A +    G  V +   +    +       ++  S
Sbjct: 9   LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 68

Query: 63  QVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAI 122
               ++ +      +   FE  + +     +V +    VS+      +++ + F +   I
Sbjct: 69  DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH--VKDVTPEEFDRVFTI 126

Query: 123 SSLGAFLCAQQVLSGMVERGKGTIIFTGCS 152
           ++ G F  A++    +   G+  ++ +   
Sbjct: 127 NTRGQFFVAREAYKHLEIGGRLILMGSITG 156

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 59.8 bits (144), Expect = 5e-12
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  + G G N+G + A + A EG  +A+L  +   L +    + RE+  +  +   D + 
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV-REKGVEARSYVCDVTS 65

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +V    + V+   G ++ L  NA    ++ P        D F + + I+  GAF   +
Sbjct: 66  EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYP--SDDFARVLTINVTGAFHVLK 123

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            V   M+ +  G I+ T   A + G    +
Sbjct: 124 AVSRQMITQNYGRIVNTASMAGVKGPPNMA 153

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 5e-12
 Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G G  LG+ +    +  G    I +R +  L   A++I+ +  ++V AI+ D  D
Sbjct: 27  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 86

Query: 74  SRSVREAF-EGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V+    E +   G   +++ NA        +    +S ++++    I   G      
Sbjct: 87  PDMVQNTVSELIKVAGHPNIVINNAA---GNFISPTERLSPNAWKTITDIVLNGTAFVTL 143

Query: 133 QVLSGMVERGKGTIIFTGCSAS 154
           ++   +++  KG    +  +  
Sbjct: 144 EIGKQLIKAQKGAAFLSITTIY 165

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 59.7 bits (144), Expect = 6e-12
 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A I G G  +G+ IA  FA  G +V +   +    +   DEI ++   Q FA R D + 
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI-QQLGGQAFACRCDITS 71

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSI 120
            + +    +  +S LG V++LV NA            ++    F+++ 
Sbjct: 72  EQELSALADFAISKLGKVDILVNNA----GGGGPKPFDMPMADFRRAY 115

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 2e-11
 Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEG---YTVAILARDLGRLSRFADEIA--REEKSQVFA 66
           R +  I G    +G  +A + A +    + V    RDL    R  +           +  
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 67  IRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLG 126
           +++D  DS+SV  A E V       ++       +        +        ++    +G
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNV----VG 117

Query: 127 AFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
                Q  L  M  RG G ++ TG    L G+    
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFND 153

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 3e-11
 Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 12/141 (8%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  +      +G++ A  FA EG  V     +  +L                 I+    D
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---------GIQTRVLD 58

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
               ++  +    +  ++VL   A            +     +  S+ ++    +L  + 
Sbjct: 59  VTKKKQIDQFANEVERLDVLFNVAGFV---HHGTVLDCEEKDWDFSMNLNVRSMYLMIKA 115

Query: 134 VLSGMVERGKGTIIFTGCSAS 154
            L  M+ +  G II     AS
Sbjct: 116 FLPKMLAQKSGNIINMSSVAS 136

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 3e-11
 Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 6/155 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +A I G    LG + A +   +G +  +L          A ++          +  +   
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDV 66

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             ++  A      +         A    ++        + + FQ+ + ++ +G F   + 
Sbjct: 67  QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 126

Query: 134 VLSGMVER------GKGTIIFTGCSASLNGIAGFS 162
           V   M +        +G II T   A+  G  G +
Sbjct: 127 VAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA 161

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 57.1 bits (137), Expect = 4e-11
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
          +A + G G  +G++IA +   +G+ VAI   +       A EI  +      A+++D SD
Sbjct: 3  VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI-NQAGGHAVAVKVDVSD 61

Query: 74 SRSVREAFEGVLS-LGFVEVLVYN 96
             V  A E     LG  +V+V N
Sbjct: 62 RDQVFAAVEQARKTLGGFDVIVNN 85

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 56.7 bits (136), Expect = 7e-11
 Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           +  I G    LG+S+A +FA E   V +  R     +    E  ++   +  A++ D + 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
              V    +  +   G ++V++ NA       P +  E+S   + K I  +  GAFL ++
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGL---ENPVSSHEMSLSDWNKVIDTNLTGAFLGSR 125

Query: 133 QVLSGMVERGKGTIIFTGCS 152
           + +   VE      +    S
Sbjct: 126 EAIKYFVENDIKGTVINMSS 145

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 56.7 bits (136), Expect = 7e-11
 Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 8/142 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
            A I G    +GR+ A  +  EG  VAI   +L      A EI         AI +D +D
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALDVTD 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             S+      +L   G +++LV NA     +      EI+ +S+ +  AI+  G     Q
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAAL---FDLAPIVEITRESYDRLFAINVSGTLFMMQ 119

Query: 133 QVLSGMVERGKGTIIFTGCSAS 154
            V   M+  G+G  I    S +
Sbjct: 120 AVARAMIAGGRGGKIINMASQA 141

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 55.5 bits (133), Expect = 2e-10
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 16/153 (10%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +G +IA++ A +G+ VA+  R                   +F + +D +D
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG------------SGAPKGLFGVEVDVTD 56

Query: 74  SRSVREAFEGVLSLGF-VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
           S +V  AF  V      VEVLV NA             ++ + F+K I  +  GAF  AQ
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAGL---SADAFLMRMTEEKFEKVINANLTGAFRVAQ 113

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
           +    M     G +IF G  + L GI   +   
Sbjct: 114 RASRSMQRNKFGRMIFIGSVSGLWGIGNQANYA 146

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 55.5 bits (133), Expect = 2e-10
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 8/150 (5%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           IA + G    +GR+IA   A  G  V   A         A  I+    +    + ++ +D
Sbjct: 6   IALVTGASRGIGRAIAETLAARGAKVIGTATSENG----AQAISDYLGANGKGLMLNVTD 61

Query: 74  SRSVRE-AFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             S+     +     G V++LV NA                + +   I  +    F  ++
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMK---DEEWNDIIETNLSSVFRLSK 118

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            V+  M+++  G II  G      G  G +
Sbjct: 119 AVMRAMMKKRHGRIITIGSVVGTMGNGGQA 148

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 55.2 bits (132), Expect = 2e-10
 Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 5/151 (3%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIRIDCS 72
           +A + G    +G  IA   A +G  + +    D   + +    +A +   +V     D S
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 73  DSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
              +VR   +  +  +G +++LV NA            +   + +   +A++    F   
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGI---QHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
              L  M ++G G II    +  L   A  S
Sbjct: 123 AAALPHMKKQGFGRIINIASAHGLVASANKS 153

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 53.6 bits (128), Expect = 9e-10
 Identities = 24/126 (19%), Positives = 52/126 (41%), Gaps = 8/126 (6%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              + G    +GR+    FA EG ++  + R+   L     E     +++  A+  D SD
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLL----AEAVAALEAEAIAVVADVSD 62

Query: 74  SRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
            ++V   F   L   G +  + + A             +  ++++K + ++  G+FL A+
Sbjct: 63  PKAVEAVFAEALEEFGRLHGVAHFAGV---AHSALSWNLPLEAWEKVLRVNLTGSFLVAR 119

Query: 133 QVLSGM 138
           +    +
Sbjct: 120 KAGEVL 125

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 52.7 bits (126), Expect = 2e-09
 Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 18/149 (12%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
              ++     +GR++A   + EG  V I AR+   L R                 + C  
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY------------VVCDL 53

Query: 74  SRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
            + +   FE    +  V++LV NA  P   +   F E++ + F+++I    L      + 
Sbjct: 54  RKDLDLLFE---KVKEVDILVLNAGGP---KAGFFDELTNEDFKEAIDSLFLNMIKIVRN 107

Query: 134 VLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            L  M E+G G I+     + ++ I    
Sbjct: 108 YLPAMKEKGWGRIVAITSFSVISPIENLY 136

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 52.5 bits (125), Expect = 2e-09
 Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 20/155 (12%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
           A + G    LGR+ A      GY V +L               R E   +  +  D +  
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDL-------------RREGEDLIYVEGDVTRE 50

Query: 75  RSVREAFEGVLSLGFV-EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQ 133
             VR A         +  V+                    +SF++ + ++ LG F   + 
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 134 VL------SGMVERGKGTIIFTGCSASLNGIAGFS 162
                       E  +G I+ T   A+  G  G +
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA 145

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 51.8 bits (123), Expect = 4e-09
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 6/110 (5%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSD 73
           A I G    +G SIA +   +G+ V +  R   G   R   E+           + D S 
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 74  SRSVREAFEGVLS-----LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQK 118
           S S+ +  E ++       G  +VLV NA            + +  +  K
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 113

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 51.8 bits (123), Expect = 4e-09
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 16/157 (10%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
            ++ R +          G +IA K    G  VA+  +      R   E   E        
Sbjct: 16  VTNQRSL----------GFAIAAKLKEAGAEVALSYQA--ERLRPEAEKLAEALGGALLF 63

Query: 68  RIDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTN-FTEISFDSFQKSIAISSL 125
           R D +    +   F GV    G ++ LV+             + +     +  ++ +S+ 
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
                A++    + E G   I+     AS   +  ++
Sbjct: 124 SLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYN 158

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.8 bits (118), Expect = 2e-08
 Identities = 22/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)

Query: 15  AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS 74
             + G    LG    + F    + VA +                EE S    +++  S +
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVV-----------ENEEASASVIVKMTDSFT 53

Query: 75  RSVREAFEGV---LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
               +    V   L    V+ ++  A           ++  F +       S   + + +
Sbjct: 54  EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA--KSKSLFKNCDLMWKQSIWTSTISS 111

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGF 161
                    +  G +   G  A+L+G  G 
Sbjct: 112 HLA--TKHLKEGGLLTLAGAKAALDGTPGM 139

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 45.9 bits (107), Expect = 4e-07
 Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 6/140 (4%)

Query: 17  IVGVGPNLGRSIARKF---AHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRI-DCS 72
           I G    LG  + +           +    R+  +     D         +  I + +  
Sbjct: 7   ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFD 66

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
               +    EGV     + VL  NA      +    T +       ++  +++   + A+
Sbjct: 67  AYDKLVADIEGVTKDQGLNVLFNNAGIA--PKSARITAVRSQELLDTLQTNTVVPIMLAK 124

Query: 133 QVLSGMVERGKGTIIFTGCS 152
             L  + +  K         
Sbjct: 125 ACLPLLKKAAKANESQPMGV 144

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.0 bits (105), Expect = 7e-07
 Identities = 20/147 (13%), Positives = 42/147 (28%)

Query: 16  AIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR 75
           A++G   NLG+ +A + A  G+ + + +R   +    A E  R           +   + 
Sbjct: 4   ALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAE 63

Query: 76  SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL 135
           +   A   +     ++               +         +     S   A     +VL
Sbjct: 64  ACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVL 123

Query: 136 SGMVERGKGTIIFTGCSASLNGIAGFS 162
                      I     A+L+    + 
Sbjct: 124 ESEKVVSALHTIPAARFANLDEKFDWD 150

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.5 bits (104), Expect = 1e-06
 Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 12/153 (7%)

Query: 13  GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS 72
           G   + G    LG +I   F   GYTV  +          A++ A +    V   +    
Sbjct: 3   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS-------ANDQA-DSNILVDGNKNWTE 54

Query: 73  DSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ 132
             +S+ E     L    V+ +   A           ++    +    I  S   + + A+
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA--SSKDFVKNADLMIKQSVWSSAIAAK 112

Query: 133 QVLSGMVERGKGTIIFTGCSASLNGIAGFSELC 165
                   +  G +  TG +A++          
Sbjct: 113 LA--TTHLKPGGLLQLTGAAAAMGPTPSMIGYG 143

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 44.3 bits (103), Expect = 1e-06
 Identities = 24/125 (19%), Positives = 38/125 (30%), Gaps = 22/125 (17%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIR---- 68
           +A + G    LGRSIA     EGY V +   R     +  +  +     +    ++    
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 69  -------------IDCSDSRSVREAFEGVLS-LGFVEVLVYNAYQPVSWQPTNFTEISFD 114
                           +      E      +  G  +VLV NA    S+ PT       D
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNAS---SFYPTPLLRNDED 120

Query: 115 SFQKS 119
             +  
Sbjct: 121 GHEPC 125

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 42.2 bits (98), Expect = 8e-06
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
            +S   I             IA+    EG  +A   ++  +L    +E A +  S +   
Sbjct: 13  VASKLSI----------AYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQ 61

Query: 68  RIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPT--NFTEISFDSFQKSIAISSL 125
                D+       E        +  V++       Q        ++ + F+ +  ISS 
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 126 GAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
                A+   S +       ++      +   I  ++
Sbjct: 122 SFVAMAKACRSMLNPG--SALLTLSYLGAERAIPNYN 156

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 40.4 bits (93), Expect = 3e-05
 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 4/151 (2%)

Query: 12  RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
            G   + G    +G  IAR  A  G    +L    G  +  A E+  E ++      +  
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 72  SDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCA 131
            D        E +  +G    L    +   +        ++ +  +++     LGA    
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 132 QQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
           +       E      +     AS  G  G  
Sbjct: 129 EL----TRELDLTAFVLFSSFASAFGAPGLG 155

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 38.9 bits (89), Expect = 1e-04
 Identities = 18/145 (12%), Positives = 43/145 (29%), Gaps = 11/145 (7%)

Query: 8   GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
            ++ + I             IA+   ++G T+A    +   L +    IA+E  S     
Sbjct: 13  VANNKSI----------AYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYE 61

Query: 68  RIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGA 127
                +             LG ++ +V++               +  S   +    S+ +
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 128 FLCAQQVLSGMVERGKGTIIFTGCS 152
            +     L  ++  G   +  +   
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLG 146

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 7/153 (4%)

Query: 14  IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD 73
           I  I G    +G +  +     G+ +  +     R +    +++  E  +     +    
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDI---RDAEVIADLSTAEGRKQAIADVLAKC 59

Query: 74  SRS----VREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFL 129
           S+     V  A  G  +     V+  N +            +       ++ ISS+ +  
Sbjct: 60  SKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAH 119

Query: 130 CAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS 162
            A       +    G            G  G +
Sbjct: 120 LAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 37.8 bits (86), Expect = 2e-04
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 5/60 (8%)

Query: 14 IAAIVGVGPN--LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDC 71
             + G+  +  +   IAR    +G  + +   D  RL      I     ++   + +D 
Sbjct: 8  RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDV 64

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.3 bits (79), Expect = 0.002
 Identities = 7/57 (12%), Positives = 17/57 (29%), Gaps = 2/57 (3%)

Query: 14 IAAIVGVGPN--LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIR 68
          I  I G+G     G  IA++ +     +              +    +  + +   +
Sbjct: 4  ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 34.7 bits (78), Expect = 0.003
 Identities = 6/72 (8%), Positives = 15/72 (20%), Gaps = 10/72 (13%)

Query: 8  GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAI 67
           +   G           G ++A+  A  G  + +                 +        
Sbjct: 16 IADDNGY----------GWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 68 RIDCSDSRSVRE 79
               + + V  
Sbjct: 66 DGSLMEIKKVYP 77

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	167
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.98
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.97
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.97
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.97
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.97
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.97
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.97
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.96
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.95
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.94
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.94
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.92
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.91
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.9
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.9
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.89
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.88
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.88
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.76
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.68
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.63
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.59
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.55
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.55
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.53
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.52
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.49
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.46
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.46
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.44
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.41
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.4
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.3
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.3
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.28
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.26
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.26
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.23
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.21
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.09
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.06
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.03
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.0
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.96
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.93
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.92
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.89
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.51
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.33
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.28
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.26
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.24
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.22
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.19
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.14
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.1
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.08
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.06
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.05
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.95
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.94
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.94
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.9
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.83
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.72
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.68
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.67
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.64
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.63
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.62
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.61
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.58
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.57
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.57
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.56
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.52
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.51
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.51
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.47
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.45
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.42
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.42
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.4
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.4
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.37
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.36
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.33
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.32
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.32
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.32
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.29
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.28
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.26
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.25
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.24
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.2
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.17
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.16
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.15
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.14
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.14
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.14
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	97.11
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.08
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.07
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.07
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.04
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.97
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.94
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.88
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.85
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.79
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.77
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.72
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.7
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.68
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.52
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.46
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.41
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.38
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.36
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.31
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.24
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.21
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.21
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.19
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.11
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.1
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.1
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.1
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.08
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.08
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.07
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.02
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.02
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.0
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.91
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.88
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.84
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.84
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.84
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.79
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.77
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.77
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.76
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.74
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.74
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.73
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.69
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.6
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.6
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.44
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.43
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.41
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.39
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.37
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.31
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.28
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.21
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	95.15
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.11
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.07
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	95.07
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.03
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.03
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.9
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.87
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.8
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.77
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.69
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.55
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.52
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.44
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.39
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.36
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.25
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.23
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.23
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.15
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.08
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.08
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.04
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	93.91
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.89
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.87
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.76
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.76
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	93.69
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.61
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.57
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	93.56
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.54
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.46
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.43
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.32
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.28
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.19
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.19
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.17
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.11
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.02
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.0
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.83
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.8
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.67
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	92.54
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.32
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	92.29
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.26
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.19
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	92.03
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.03
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	91.83
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.76
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.73
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.7
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.65
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.6
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.56
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.3
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.25
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.14
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.56
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.53
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	90.42
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	90.27
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.26
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	90.2
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	90.12
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.86
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	89.78
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	89.55
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.46
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.35
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.34
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	89.28
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.2
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	89.05
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.84
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	88.83
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	88.83
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	88.74
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.71
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	88.49
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	88.43
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	88.36
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	88.32
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	88.2
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	88.15
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	88.12
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.95
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.89
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	87.7
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	87.44
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	87.36
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	87.33
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	87.28
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.27
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	87.13
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.03
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	86.66
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.66
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	86.41
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.17
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	86.14
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	86.05
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.0
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	85.98
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	85.7
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	85.55
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.44
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	85.17
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	85.06
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.95
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	84.89
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	84.66
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	84.61
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.46
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.4
d1jyea_	271	Lac-repressor (lacR) core (C-terminal domain) {Esc	84.35
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	84.3
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.26
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	84.14
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	84.06
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	83.88
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.79
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.71
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	83.67
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	83.66
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	83.45
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	83.19
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.16
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.05
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	82.87
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.54
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	82.39
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.23
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	82.11
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	81.95
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	81.87
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.82
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	81.64
d1wbha1	213	KDPG aldolase {Escherichia coli [TaxId: 562]}	81.61
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	81.04
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	80.96
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	80.8
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	80.7
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	80.66
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	80.62
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.53
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	80.36
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	80.35
d1qh8b_	519	Nitrogenase iron-molybdenum protein, beta chain {K	80.2
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	80.06

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.3e-38  Score=233.07  Aligned_cols=156  Identities=21%  Similarity=0.252  Sum_probs=149.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||+++|++|+++|++|++++|+++.++++.++++. .+.++.++.+|++++++++++++++. +
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999999999999999987 77889999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|++|++|||||.   ....++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||..+..+.+++.+|++
T Consensus        85 ~g~iDilvnnag~---~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (251)
T d2c07a1          85 HKNVDILVNNAGI---TRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  161 (251)
T ss_dssp             CSCCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             cCCceeeeecccc---ccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHH
Confidence            9999999999999   7888999999999999999999999999999999999999999999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       162 s  162 (251)
T d2c07a1         162 S  162 (251)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-38  Score=233.87  Aligned_cols=156  Identities=24%  Similarity=0.337  Sum_probs=147.3

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      +|.++||+++||||++|||+++|++|+++|++|++++|++++++++.++++. .+.++.++.+|++++++++++++++. 
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~-~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4667999999999999999999999999999999999999999999999988 77889999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++|+||++|||||.   ....++ +.+.|+|++.+++|+.++|+++|.++|+|.+++.|+||++||.++..+.+++.+|+
T Consensus        85 ~~g~iDilvnnAG~---~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~  160 (255)
T d1fmca_          85 KLGKVDILVNNAGG---GGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HHSSCCEEEECCCC---CCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HcCCCCEeeeCCcC---CCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccch
Confidence            99999999999998   566666 78999999999999999999999999999999999999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       161 as  162 (255)
T d1fmca_         161 SS  162 (255)
T ss_dssp             HH
T ss_pred             hH
Confidence            75

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.7e-38  Score=231.31  Aligned_cols=156  Identities=22%  Similarity=0.316  Sum_probs=145.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++++++++++++++. ++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999998888866578899999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc-ccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS-LNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~~y~a  166 (167)
                      |+||+||||||+   .+.+++.+.+.|+|++.+++|+.++|+++|.++|.|++++.|+||+++|..+ ..+.+++.+|++
T Consensus        82 g~iDiLVnnAG~---~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~a  158 (251)
T d1vl8a_          82 GKLDTVVNAAGI---NRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA  158 (251)
T ss_dssp             SCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHH
Confidence            999999999999   7888999999999999999999999999999999999998999999999876 457788999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       159 s  159 (251)
T d1vl8a_         159 S  159 (251)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=8.2e-38  Score=230.87  Aligned_cols=156  Identities=22%  Similarity=0.308  Sum_probs=144.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++... .+.++..+.+|++|+++++++++++. ++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999888887653 35589999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||+||||||+  ..+.+++.+.+.|+|++.+++|+.++|+++|+++|.|++++.|+||++||..+..+.|++.+|++|
T Consensus        82 G~iDiLVnnAG~--~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          82 GRIDGFFNNAGI--EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             SCCSEEEECCCC--CCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             CCCCEEEECCcc--cccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            999999999997  134578999999999999999999999999999999999999999999999999999999999875

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.3e-38  Score=232.69  Aligned_cols=155  Identities=19%  Similarity=0.252  Sum_probs=145.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|+++||||++|||+++|++|+++|++|++++|+ .+.++++.+.+....+.++.++.+|++|+++++++++++. ++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999999987 4667788877766578899999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||+||||||.   ...+++.+.+.|+|++++++|+.++++++|.++|.|++++.|+||++||.++..+.+++.+|++|
T Consensus        82 G~iDiLVnnAG~---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  158 (260)
T d1x1ta1          82 GRIDILVNNAGI---QHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAA  158 (260)
T ss_dssp             SCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEeeccc---ccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhh
Confidence            999999999999   77889999999999999999999999999999999999999999999999999999999999875

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-37  Score=228.38  Aligned_cols=153  Identities=21%  Similarity=0.277  Sum_probs=143.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ..+++|+++||||++|||+++|++|+++|++|++.+|++++++++.+++    +.+..++.+|++|+++++++++++. +
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----ADAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888877765    3478899999999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++++|++|||||.   ...+++++.+.|+|++++++|+.++|+++|.+.|.|.+++.|+||++||..+..+.+++.+|++
T Consensus        78 ~g~idilinnAG~---~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  154 (244)
T d1nffa_          78 FGGLHVLVNNAGI---LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTA  154 (244)
T ss_dssp             HSCCCEEEECCCC---CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hCCCeEEEECCcc---cCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhh
Confidence            9999999999999   7889999999999999999999999999999999999999999999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       155 s  155 (244)
T d1nffa_         155 T  155 (244)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-38  Score=230.26  Aligned_cols=155  Identities=21%  Similarity=0.293  Sum_probs=147.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++.||+++||||++|||+++|++|+++|++|++.+|++++++++.++++. .+.++.++.||++|+++++++++++. ++
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999987 78899999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|++|||||.   ....++.+.+.++|++++++|+.+++++++.++|.|.+++.|+||++||.++..|.|++++|++|
T Consensus        83 g~idilinnag~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  159 (244)
T d1yb1a_          83 GDVSILVNNAGV---VYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSS  159 (244)
T ss_dssp             CCCSEEEECCCC---CCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             CCCceeEeeccc---cccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHH
Confidence            999999999999   77788899999999999999999999999999999999999999999999999999999999875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.5e-37  Score=229.67  Aligned_cols=156  Identities=15%  Similarity=0.110  Sum_probs=148.0

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ++++||+++||||++|||+++|++|+++|++|++.+|++++++++.+++.. .+.++.++.+|++++++++++++++. +
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999999987 77889999999999999999999998 7


Q ss_pred             cC-CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           87 LG-FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~-~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      ++ ++|++|||||.   ....++.+.+.|+|++++++|+.++|+++|.++|.|.+++.|+||++||..+..+.|++.+|+
T Consensus        83 ~~~~idilvnnAG~---~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~  159 (259)
T d2ae2a_          83 FHGKLNILVNNAGI---VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG  159 (259)
T ss_dssp             TTTCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             hCCCceEEEECCce---eccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchH
Confidence            76 89999999999   788899999999999999999999999999999999999999999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       160 as  161 (259)
T d2ae2a_         160 AT  161 (259)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.2e-37  Score=228.63  Aligned_cols=153  Identities=25%  Similarity=0.364  Sum_probs=141.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|++|+++|++|++.+|++..  +..+.++. .+.++.++.+|++|+++++++++++. ++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHH-cCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3679999999999999999999999999999999997653  23334444 67889999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||++|||||+   .+..++.+.+.|+|++++++|+.++++++|.++|.|++++.|+||++||.++..+.+++.+|++|
T Consensus        79 G~iDilVnnAG~---~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  155 (247)
T d2ew8a1          79 GRCDILVNNAGI---YPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST  155 (247)
T ss_dssp             SCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             CCCCEEEECCCC---CCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhh
Confidence            999999999999   78899999999999999999999999999999999999999999999999999999999999875

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6e-38  Score=229.76  Aligned_cols=151  Identities=21%  Similarity=0.280  Sum_probs=143.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||+++|++|+++|++|++.+|+++.++++.+++.    .+...+.+|++++++++++++++. ++|
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----ANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            579999999999999999999999999999999999999888887763    468889999999999999999999 999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +||++|||||.   ....++.+.+.|+|++.+++|+.++|+++|.++|+|++++.|+||++||.++..+.+++++|++|
T Consensus        78 ~iDilVnnAg~---~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~as  153 (243)
T d1q7ba_          78 EVDILVNNAGI---TRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAA  153 (243)
T ss_dssp             SCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             Ccceehhhhhh---ccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHH
Confidence            99999999999   78889999999999999999999999999999999999989999999999999999999999875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=9.6e-38  Score=230.79  Aligned_cols=155  Identities=20%  Similarity=0.300  Sum_probs=146.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||+++|+.|+++|++|++++|+++.++++.++++. .+.++..+.+|++++++++++++++. ++|
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999999999999999999999987 77889999999999999999999999 999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.  ..+.+++.+.+.|+|++.+++|+.++++++|.++|.|.+++.|+||++||.++..+.|++.+|++|
T Consensus        82 ~iDilVnnaG~--~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~as  158 (260)
T d1zema1          82 KIDFLFNNAGY--QGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  158 (260)
T ss_dssp             CCCEEEECCCC--CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCeehhhhcc--ccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHH
Confidence            99999999997  124578999999999999999999999999999999999999999999999999999999999875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.3e-37  Score=229.80  Aligned_cols=153  Identities=23%  Similarity=0.306  Sum_probs=145.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      +||++|||||++|||+++|++|+++|++|++.+|+++.++++.++++. .+.++.++.+|++|+++++++++++. ++|+
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999999999999999999987 77899999999999999999999999 9999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHh--hHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSG--MVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||+||||||+   ...+++.+.+.|+|++++++|+.++++++|+++|+  |.+++.|+||++||..+..+.+++.+|++|
T Consensus        80 iDilVnnAG~---~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~as  156 (257)
T d2rhca1          80 VDVLVNNAGR---PGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS  156 (257)
T ss_dssp             CSEEEECCCC---CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCEEEecccc---cCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHH
Confidence            9999999999   77889999999999999999999999999999997  566677999999999999999999999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.6e-37  Score=227.15  Aligned_cols=151  Identities=24%  Similarity=0.338  Sum_probs=144.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCe-------EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYT-------VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~-------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +++|||||++|||+++|++|+++|++       |++.+|+.+.++++.++++. .+.++.++.+|++|+++++++++++.
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVRRLTTHIV   80 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999997       88889999999999999987 78899999999999999999999999


Q ss_pred             -hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccc
Q 031016           86 -SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        86 -~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                       ++|++|++|||||.   ....++.+.+.|+|++++++|++++|+++|.++|+|++++.|+||++||.++..+.|++++|
T Consensus        81 ~~~g~iDilvnnAg~---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y  157 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGV---GRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  157 (240)
T ss_dssp             HHTSCCSEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCcceeeccccc---ccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHH
Confidence             99999999999999   78899999999999999999999999999999999999989999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       158 ~as  160 (240)
T d2bd0a1         158 CMS  160 (240)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3.5e-37  Score=226.65  Aligned_cols=154  Identities=23%  Similarity=0.257  Sum_probs=144.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|++|+++|++|++++|+++.++++.+++..  +.++.++.+|++|+++++++++++. ++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999999999999999999988888754  4579999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCC-ceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGK-GTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      |+||+||||||.   ...+++.+.+.|+|++++++|+.++|+++|.++|.|++++. |+||++||..+..+.|++.+|++
T Consensus        81 G~iDiLVnnAg~---~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~a  157 (251)
T d1zk4a1          81 GPVSTLVNNAGI---AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNA  157 (251)
T ss_dssp             SSCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCceEEEecccc---ccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHH
Confidence            999999999999   78889999999999999999999999999999999998875 59999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       158 s  158 (251)
T d1zk4a1         158 S  158 (251)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3.6e-37  Score=226.82  Aligned_cols=151  Identities=22%  Similarity=0.206  Sum_probs=142.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +++|+++||||++|||+++|++|+++|++|++.+|++++++++.+++    +.++.++.+|++++++++++++++. ++|
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999998877776654    5579999999999999999999999 999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ++|++|||||.   ....++.+.+.|+|++++++|+.++++++|.++|.|++++.|+||++||.++..+.+++.+|++|
T Consensus        79 ~iDilVnnAg~---~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~as  154 (254)
T d1hdca_          79 SVDGLVNNAGI---STGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGAS  154 (254)
T ss_dssp             CCCEEEECCCC---CCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CccEEEecCcc---ccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHH
Confidence            99999999999   78889999999999999999999999999999999999989999999999999999999999875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.7e-37  Score=227.44  Aligned_cols=156  Identities=19%  Similarity=0.152  Sum_probs=133.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.. .+.++..+.+|++++++++++++++. +
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999999987 67789999999999999999999998 7


Q ss_pred             c-CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           87 L-GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~-~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      + |++|++|||||.   ....++.+.+.++|++.+++|+.++|+++|.++|.|++++.|+||++||..+..+.++..+|+
T Consensus        83 ~~g~idilvnnAG~---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  159 (259)
T d1xq1a_          83 FGGKLDILINNLGA---IRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  159 (259)
T ss_dssp             HTTCCSEEEEECCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             hCCCcccccccccc---cCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccc
Confidence            7 789999999999   788899999999999999999999999999999999999899999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       160 as  161 (259)
T d1xq1a_         160 AT  161 (259)
T ss_dssp             HH
T ss_pred             cc
Confidence            75

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6.8e-37  Score=225.63  Aligned_cols=152  Identities=25%  Similarity=0.347  Sum_probs=144.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      .|+++||||++|||+++|++|+++|++|++.+|++++++++.++++. .+.++.++.+|++|+++++++++++. ++|+|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            37899999999999999999999999999999999999999999987 77899999999999999999999999 99999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||||||+   .+.+++.+.+.|+|++.+++|++++++++|.++|.|.+++ .|+||++||..+..+.|++++|++|
T Consensus        80 DilVnnAG~---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  154 (255)
T d1gega_          80 DVIVNNAGV---APSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSS  154 (255)
T ss_dssp             CEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cEEEecccc---cccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhC
Confidence            999999999   7889999999999999999999999999999999887775 5889999999999999999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.1e-37  Score=225.45  Aligned_cols=151  Identities=21%  Similarity=0.318  Sum_probs=142.8

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      ++++||||++|||+++|++|+++|++|++.+ |+++.++++.++++. .+.++.++.+|++|+++++++++++. ++|++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999998875 577778888888887 78899999999999999999999999 99999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||||||.   ....++.+.+.|+|++.+++|++++|+++|.++|+|++++.|+||++||.++..+.+++.+|++|
T Consensus        81 DiLVnnAg~---~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as  154 (244)
T d1edoa_          81 DVVVNNAGI---TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAA  154 (244)
T ss_dssp             SEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             Ccccccccc---ccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHH
Confidence            999999999   78889999999999999999999999999999999999999999999999999999999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=9.5e-37  Score=225.45  Aligned_cols=155  Identities=22%  Similarity=0.286  Sum_probs=144.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      .+++|+++||||++|||+++|++|+++|++|++++|+. +.++++.++++. .+.++..+.+|++++++++++++++. +
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999975 467788888887 78899999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCc-eEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKG-TIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +|+||+||||||+   ..+.++.+.+.++|++.+++|+.++++++|.++|.|.+++.| +||++||..+..+.|++.+|+
T Consensus        83 ~G~iDiLVnnAG~---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~  159 (261)
T d1geea_          83 FGKLDVMINNAGL---ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             hCCCCEeecccee---cCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccc
Confidence            9999999999999   778899999999999999999999999999999999888754 599999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       160 as  161 (261)
T d1geea_         160 AS  161 (261)
T ss_dssp             HH
T ss_pred             cC
Confidence            75

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.1e-36  Score=224.54  Aligned_cols=153  Identities=28%  Similarity=0.378  Sum_probs=141.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |.+++|+++||||++|||+++|++|+++|++|++.+|+.+.++++.+++    +.++.++.+|++++++++++++++. +
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999998888777664    5688999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCccccCCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +|+||++|||||.   ...+++.+.+.|+|++.+++|+.++++++|.++|.|.+++ .|+||++||..+..+.+++++|+
T Consensus        77 ~g~iDilVnnAg~---~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  153 (256)
T d1k2wa_          77 WGSIDILVNNAAL---FDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYC  153 (256)
T ss_dssp             HSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             hCCccEEEeeccc---ccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchh
Confidence            9999999999999   7788999999999999999999999999999999876654 69999999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       154 as  155 (256)
T d1k2wa_         154 AT  155 (256)
T ss_dssp             HH
T ss_pred             hh
Confidence            74

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.9e-36  Score=220.65  Aligned_cols=149  Identities=21%  Similarity=0.217  Sum_probs=136.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .++||+++||||++|||+++|++|+++|++|++.+|+++.. +..+.+    +  ..++.+|++|+++++++++++. ++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~----~--~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI----G--GAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH----T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc----C--CeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            36899999999999999999999999999999999987654 333332    2  3567899999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||+||||||.   ..++++.+.+.|+|++.+++|+.++|+++|+++|+|++++.|+||++||..+..+.+++.+|++|
T Consensus        75 G~iDiLVnnAG~---~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  151 (248)
T d2d1ya1          75 GRVDVLVNNAAI---AAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNAS  151 (248)
T ss_dssp             SCCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHH
T ss_pred             CCCCeEEEeCcC---CCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHH
Confidence            999999999999   78899999999999999999999999999999999999989999999999999999999999874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.7e-36  Score=222.15  Aligned_cols=151  Identities=22%  Similarity=0.276  Sum_probs=140.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|++|+++|++|++.+|+++.++++.+++    +.+..++.+|++++++++++++++. ++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999999999998888877765    4578899999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|++|||||.   ....++.+.+.|+|++.+++|+.++|+++|.++|.|+++ +|+||++||..+..+.+++.+|++|
T Consensus        79 g~iDilVnnAG~---~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~as  154 (253)
T d1hxha_          79 GTLNVLVNNAGI---LLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSAS  154 (253)
T ss_dssp             CSCCEEEECCCC---CCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCeEEecccc---cCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccch
Confidence            999999999999   778899999999999999999999999999999999765 5999999999999999999999875

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.4e-36  Score=219.59  Aligned_cols=145  Identities=29%  Similarity=0.390  Sum_probs=126.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+.            ..++..+.+|++|+++++++++++. +
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------PKGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------------CTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------------hcCceEEEEecCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999998653            3456789999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|+||+||||||+   ....++.+.+.|+|++++++|+.++++++|.++|.|.+++.|+||++||.++..+.+++.+|++
T Consensus        71 ~g~iDiLVnnAG~---~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  147 (237)
T d1uzma1          71 QGPVEVLVSNAGL---SADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAA  147 (237)
T ss_dssp             HSSCSEEEEECSC---CC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHH
T ss_pred             cCCceEEEeeecc---cccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHH
Confidence            9999999999999   7888999999999999999999999999999999999999999999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       148 s  148 (237)
T d1uzma1         148 S  148 (237)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-36  Score=219.87  Aligned_cols=151  Identities=19%  Similarity=0.281  Sum_probs=137.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .++||+++||||++|||+++|++|+++|++|++.+|+++.++++.+++     .+..++.+|++|+++++++++++. ++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-----~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999999988887776553     357889999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |+||++|||||.  .....++++.+.|+|++++++|+.++|+++|.++|.|+++ +|+||++||..+..+.+++.+|++|
T Consensus        78 g~iDilVnnAG~--~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~as  154 (250)
T d1ydea1          78 GRLDCVVNNAGH--HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVAT  154 (250)
T ss_dssp             SCCCEEEECCCC--CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCCEEEecccc--cccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHH
Confidence            999999999997  1345678899999999999999999999999999999875 4899999999999999999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=3.2e-35  Score=216.89  Aligned_cols=155  Identities=16%  Similarity=0.145  Sum_probs=147.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ++++|+++||||++|||++++++|+++|++|++++|++++++++.++++. .+.+++++.+|++++++++++++++. ++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999999999999987 78889999999999999999999998 77


Q ss_pred             -CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 -GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 -~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                       +++|++|||||.   ....++.+.+.++|++++++|+.+++++.+.+.|.|.+++.|+||++||.++..+.+++.+|++
T Consensus        82 ~g~idilinnag~---~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~  158 (258)
T d1ae1a_          82 DGKLNILVNNAGV---VIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSA  158 (258)
T ss_dssp             TSCCCEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCcEEEeccccc---cccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHH
Confidence             689999999999   7888999999999999999999999999999999999999999999999999999999999986


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      +
T Consensus       159 s  159 (258)
T d1ae1a_         159 S  159 (258)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-35  Score=216.97  Aligned_cols=150  Identities=21%  Similarity=0.308  Sum_probs=136.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |.+++|+++||||++|||+++|++|+++|++|++++|++++++++.+.+      +..++.+|++++++++++++++. +
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            3468999999999999999999999999999999999988887776543      35678999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|+||+||||||+   ....++.+.+.|+|++.+++|+.++++++|.++|.|.+++.+.++++|| .+..+.+++.+|++
T Consensus        75 ~g~iDilVnnAG~---~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~a  150 (242)
T d1ulsa_          75 LGRLDGVVHYAGI---TRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAA  150 (242)
T ss_dssp             HSSCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHH
T ss_pred             cCCceEEEECCcc---cccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHH
Confidence            9999999999999   7888999999999999999999999999999999999988888888776 56788999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       151 s  151 (242)
T d1ulsa_         151 S  151 (242)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-35  Score=223.66  Aligned_cols=155  Identities=21%  Similarity=0.268  Sum_probs=139.7

Q ss_pred             CCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC---------hhhHHHHHHHHHhhcCCcEEEEEeecCCHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD---------LGRLSRFADEIAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      ++|.++||+++||||++|||+++|++|+++|++|++.+++         .+.++++.+++..    +.....+|+++.++
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~   76 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR----RGGKAVANYDSVEA   76 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH----TTCEEEEECCCGGG
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh----cccccccccchHHH
Confidence            3567899999999999999999999999999999998764         3456666666654    33456789999999


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      ++++++++. ++|+||+||||||+   ...+++.+.+.|+|++++++|+.++|+++|.++|+|++++.|+||++||..+.
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi---~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~  153 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGI---LRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  153 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcc---CCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc
Confidence            999999999 99999999999999   78889999999999999999999999999999999999989999999999999


Q ss_pred             cCCCCccccccC
Q 031016          156 NGIAGFSELCKN  167 (167)
Q Consensus       156 ~~~~~~~~y~as  167 (167)
                      .|.+++.+|++|
T Consensus       154 ~~~~~~~~Y~as  165 (302)
T d1gz6a_         154 YGNFGQANYSAA  165 (302)
T ss_dssp             HCCTTCHHHHHH
T ss_pred             CCCCCcHHHHHH
Confidence            999999999975

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=213.55  Aligned_cols=155  Identities=19%  Similarity=0.280  Sum_probs=141.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++|++|||||++|||+++|++|+++|++|++.+|++++++++.++++... +.++.++.||++++++++++++++. ++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999999999999999999998732 3589999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccccCC--CCccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASLNGI--AGFSE  163 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~--~~~~~  163 (167)
                      ++||+||||||.   ...+++.+.+.++|+..+++|+.++|++.+.++|.|++++  .|+||++||.++..+.  ++...
T Consensus        88 g~iD~lVnnAg~---~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~  164 (257)
T d1xg5a_          88 SGVDICINNAGL---ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  164 (257)
T ss_dssp             CCCSEEEECCCC---CCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             CCCCEEEecccc---cCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHH
Confidence            999999999999   7888999999999999999999999999999999998765  6899999999987654  45666


Q ss_pred             cccC
Q 031016          164 LCKN  167 (167)
Q Consensus       164 y~as  167 (167)
                      |++|
T Consensus       165 Y~~s  168 (257)
T d1xg5a_         165 YSAT  168 (257)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=8e-35  Score=215.89  Aligned_cols=154  Identities=21%  Similarity=0.313  Sum_probs=139.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|++|+++|++|++++|++++++++.+++..  ...+.++.+|++|+++++++++++. ++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999988864  3457889999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCC--CCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcc-cc
Q 031016           88 GFVEVLVYNAYQPVSWQPT--NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFS-EL  164 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~-~y  164 (167)
                      |++|++|||||.   ....  .+.+.+.|+|++++++|+.++++++|.++|+|.+++.|+||++||..+..+.++.. .|
T Consensus        81 g~iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y  157 (268)
T d2bgka1          81 GKLDIMFGNVGV---LSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVY  157 (268)
T ss_dssp             SCCCEEEECCCC---CCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHH
T ss_pred             CCcceecccccc---ccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccccccc
Confidence            999999999998   4433  57889999999999999999999999999999999899999999999998877654 78


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       158 ~as  160 (268)
T d2bgka1         158 TAT  160 (268)
T ss_dssp             HHH
T ss_pred             chh
Confidence            764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-34  Score=215.45  Aligned_cols=156  Identities=22%  Similarity=0.281  Sum_probs=137.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      ++++|+++||||++|||+++|++|+++|++|++.+|++++++++.++++...  +.++..+.+|++++++++++++++. 
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999987632  3469999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCC----CCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNF----TEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++|+||++|||||.   ..+.++    .+.+.++|++++++|+.++++++|.++|.|++++.+.|+++||.++..+.+++
T Consensus        82 ~~g~iDilvnnAG~---~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~  158 (272)
T d1xkqa_          82 QFGKIDVLVNNAGA---AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF  158 (272)
T ss_dssp             HHSCCCEEEECCCC---CCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSS
T ss_pred             HhCCceEEEeCCcc---cCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCc
Confidence            99999999999998   554444    46777899999999999999999999999988764555555556779999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      .+|++|
T Consensus       159 ~~Y~as  164 (272)
T d1xkqa_         159 LYYAIA  164 (272)
T ss_dssp             HHHHHH
T ss_pred             chhhhH
Confidence            999874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.5e-34  Score=213.82  Aligned_cols=157  Identities=20%  Similarity=0.264  Sum_probs=141.3

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+++....  +.++.++.+|++++++++++++++. +
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999999999999987632  2368999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +|+||++|||||... ....+..+.+.|+|++.+++|+.++|+++|.++|.|.+++.|+|+++||.++..+.+++.+|++
T Consensus        82 ~G~iDilVnnAG~~~-~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          82 FGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             cCCceEEEeeccccc-ccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            999999999999711 1223456678899999999999999999999999999988899999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       161 s  161 (274)
T d1xhla_         161 A  161 (274)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-34  Score=215.12  Aligned_cols=157  Identities=20%  Similarity=0.290  Sum_probs=143.6

Q ss_pred             CCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh----cCCcEEEEEeecCCHHHHHHHHH
Q 031016            7 SGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE----EKSQVFAIRIDCSDSRSVREAFE   82 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~   82 (167)
                      +..++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++...    .+.++..+.+|++|+++++++++
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   86 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   86 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence            35679999999999999999999999999999999999999999888888642    35689999999999999999999


Q ss_pred             HHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           83 GVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        83 ~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++. ++|+||+||||||.   ....++.+.+.|+|++.+++|+.++|+++|.++|.|.+++.|+||++|+ .+..+.|+.
T Consensus        87 ~~~~~~G~iDiLVnnAg~---~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~  162 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGG---QFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLA  162 (297)
T ss_dssp             HHHHHHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTC
T ss_pred             HHHHHhCCeEEEEeeccc---cccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-ccccccccc
Confidence            999 89999999999999   7888999999999999999999999999999999999998999999966 556778888


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       163 ~~Y~as  168 (297)
T d1yxma1         163 VHSGAA  168 (297)
T ss_dssp             HHHHHH
T ss_pred             ccchhH
Confidence            988764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-34  Score=211.97  Aligned_cols=149  Identities=21%  Similarity=0.304  Sum_probs=133.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      |.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     ..+..+.+|++|++++++++++   +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~---~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALGG---I   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTT---C
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----CCCeEEEEeCCCHHHHHHHHHH---c
Confidence            3568999999999999999999999999999999999998887776654     2477889999999998876654   6


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      |+||+||||||.   ....++.+.+.++|++.+++|+.++++++|.+.|.|.++ .+|+||++||..+..+.|++.+|++
T Consensus        73 g~iDilVnnAg~---~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~a  149 (242)
T d1cyda_          73 GPVDLLVNNAAL---VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSS  149 (242)
T ss_dssp             CCCSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCeEEEECCcc---ccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccc
Confidence            999999999999   778899999999999999999999999999999987655 4689999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       150 s  150 (242)
T d1cyda_         150 T  150 (242)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-34  Score=211.49  Aligned_cols=149  Identities=20%  Similarity=0.304  Sum_probs=134.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     ..+..+.+|++|++++++++++   +
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~---~   74 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCVDLGDWEATERALGS---V   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTT---C
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc-----CCCeEEEEeCCCHHHHHHHHHH---h
Confidence            3468999999999999999999999999999999999998888777654     2467889999999998877654   5


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHh-cCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVE-RGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ++||++|||||.   ....++.+.+.|+|++.+++|+.++++++|.++|.|.+ ++.|+||++||.++..+.|++.+|++
T Consensus        75 g~iDilVnnAg~---~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  151 (244)
T d1pr9a_          75 GPVDLLVNNAAV---ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             CCCCEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCceEEEecccc---ccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhh
Confidence            999999999999   78889999999999999999999999999999997654 45799999999999999999999987


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       152 s  152 (244)
T d1pr9a_         152 T  152 (244)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3e-34  Score=212.33  Aligned_cols=157  Identities=22%  Similarity=0.300  Sum_probs=131.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc--CCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE--KSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|+++||||++|||+++|++|+++|++|++++|++++++++.+++....  +.++.++.+|++++++++++++++. +
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            679999999999999999999999999999999999999999999987632  2369999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCC-CCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc-cccCCCCcccc
Q 031016           87 LGFVEVLVYNAYQPVS-WQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA-SLNGIAGFSEL  164 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~-~~~~~~~~~~y  164 (167)
                      +|+||++|||||.... ....++.+.+.|+|++.+++|+.++++++|.++|.|++++ |.+|+++|.. +..+.|++.+|
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y  161 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY  161 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhh
Confidence            9999999999997210 1223456779999999999999999999999999998875 5666666654 57899999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       162 ~as  164 (264)
T d1spxa_         162 SIA  164 (264)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=4.4e-34  Score=211.00  Aligned_cols=157  Identities=20%  Similarity=0.224  Sum_probs=140.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++++++++++++++. +
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999888888866578899999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCcccc-------CC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLN-------GI  158 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~-------~~  158 (167)
                      +|++|++|||||.   ....++.+.+.|+|++.+++|+.++++++|.+.|.|.++ ..|+|+++++.....       +.
T Consensus        85 ~g~iDilVnnAg~---~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          85 LGPISGLIANAGV---SVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             SCSEEEEEECCCC---CCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             hCCCcEecccccc---cccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            9999999999999   788899999999999999999999999999999998655 467888888766544       33


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      ++..+|++|
T Consensus       162 ~~~~~Y~as  170 (260)
T d1h5qa_         162 LTQVFYNSS  170 (260)
T ss_dssp             CSCHHHHHH
T ss_pred             ccccchhhh
Confidence            567788764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=5.1e-34  Score=212.35  Aligned_cols=152  Identities=22%  Similarity=0.289  Sum_probs=134.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      |.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++    +.++..+.+|++++++++++++++. +
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GDNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeeEEecccccHHHHHHHHHHHHHH
Confidence            4468999999999999999999999999999999999988887776654    4589999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCC-----CCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPT-----NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      +|++|++|||||+   ....     ...+.+.++|++++++|+.++++++|.++|.|++++ |+||+++|..+..+.+++
T Consensus        77 ~g~idilvnnAG~---~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~  152 (276)
T d1bdba_          77 FGKIDTLIPNAGI---WDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGG  152 (276)
T ss_dssp             HSCCCEEECCCCC---CCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSC
T ss_pred             hCCcccccccccc---cCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCC
Confidence            9999999999997   3332     224455678999999999999999999999998765 899999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ++|++|
T Consensus       153 ~~Y~as  158 (276)
T d1bdba_         153 PLYTAA  158 (276)
T ss_dssp             HHHHHH
T ss_pred             chHHHH
Confidence            999875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-33  Score=208.17  Aligned_cols=159  Identities=14%  Similarity=0.180  Sum_probs=141.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHH---cCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAH---EGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+++|+++||||++|||+++|++|++   +|++|++++|++++++++.+++... .+.++.++.||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            46799999999999999999999986   7999999999999999999998764 3558999999999999999999887


Q ss_pred             Hh-----cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC--CceEEEecCCccccC
Q 031016           85 LS-----LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG--KGTIIFTGCSASLNG  157 (167)
Q Consensus        85 ~~-----~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~  157 (167)
                      .+     .+.+|++|||||..+..+.+++.+.+.++|++++++|+.++++++|.++|.|++++  .|+||++||.++..|
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            52     35799999999973333456788999999999999999999999999999999875  589999999999999


Q ss_pred             CCCccccccC
Q 031016          158 IAGFSELCKN  167 (167)
Q Consensus       158 ~~~~~~y~as  167 (167)
                      .+++.+|++|
T Consensus       163 ~~~~~~Y~as  172 (259)
T d1oaaa_         163 YKGWGLYCAG  172 (259)
T ss_dssp             CTTCHHHHHH
T ss_pred             CccchHHHHH
Confidence            9999999875

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=207.55  Aligned_cols=146  Identities=22%  Similarity=0.324  Sum_probs=133.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +||+++||||++|||+++|++|+++|++|++++|+.+++++..+++... .+.++.++.+|++++++++++++++. ++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999999999998888653 34579999999999999999999999 999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCCccccc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                      +||+||||||.   ..        .++|++.+++|+.+++.+++.++|.|.+++   .|+||++||.++..|.+++++|+
T Consensus        82 ~iDilVnnAg~---~~--------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  150 (254)
T d2gdza1          82 RLDILVNNAGV---NN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  150 (254)
T ss_dssp             CCCEEEECCCC---CC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CcCeecccccc---cc--------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchH
Confidence            99999999998   32        246899999999999999999999998764   48899999999999999999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       151 as  152 (254)
T d2gdza1         151 AS  152 (254)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-34  Score=212.44  Aligned_cols=149  Identities=17%  Similarity=0.142  Sum_probs=136.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~   89 (167)
                      .++++||||++|||+++|++|+++ |++|++.+|+.+++++..++++. .+.++.++.||++|.++++++++++. ++++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            467799999999999999999986 89999999999999999999987 67789999999999999999999999 8999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      ||+||||||+   ....+..+.+.++|+..+++|+++++++++.++|.|+++  |+||++||..+..+.++..+|.+
T Consensus        82 iDiLVnNAGi---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~  153 (275)
T d1wmaa1          82 LDVLVNNAGI---AFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQ  153 (275)
T ss_dssp             EEEEEECCCC---CCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHH
T ss_pred             cEEEEEcCCc---CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhh
Confidence            9999999999   677788888899999999999999999999999999764  89999999999888777766643

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-33  Score=204.93  Aligned_cols=155  Identities=15%  Similarity=0.154  Sum_probs=145.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++....+.....+.+|+++++.++..++.+. ..
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999999999999888876577889999999999999999999998 88


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +.+|+++||+|.   ....++.+.+.|+|+.++++|+.+++.+++.++|+|+++ +|+||++||.++..+.|++.+|++|
T Consensus        91 g~~~~li~nag~---~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~as  166 (269)
T d1xu9a_          91 GGLDMLILNHIT---NTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSAS  166 (269)
T ss_dssp             TSCSEEEECCCC---CCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             CCcccccccccc---ccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHH
Confidence            999999999999   778888999999999999999999999999999999764 5999999999999999999999975

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=3.5e-33  Score=205.48  Aligned_cols=149  Identities=14%  Similarity=0.135  Sum_probs=131.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC-CHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS-DSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~-   85 (167)
                      |.+++|+++||||++|||+++|++|+++|++|++++|+.++.++..+......+.++.++.+|++ +.++++++++++. 
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999888777666655444424558999999998 6778999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC---CceEEEecCCccccCCCCcc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG---KGTIIFTGCSASLNGIAGFS  162 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~  162 (167)
                      ++++||+||||||.   .        +.++|++++++|+.+++++++.++|.|.+++   .|+||++||.++..|.+++.
T Consensus        81 ~~g~iDilvnnAG~---~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~  149 (254)
T d1sbya1          81 QLKTVDILINGAGI---L--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HHSCCCEEEECCCC---C--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred             HcCCCCEEEeCCCC---C--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCH
Confidence            89999999999997   2        4578999999999999999999999997763   58999999999999999999


Q ss_pred             ccccC
Q 031016          163 ELCKN  167 (167)
Q Consensus       163 ~y~as  167 (167)
                      +|++|
T Consensus       150 ~Y~as  154 (254)
T d1sbya1         150 VYSAS  154 (254)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.8e-33  Score=206.88  Aligned_cols=145  Identities=19%  Similarity=0.206  Sum_probs=131.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~   92 (167)
                      |++||||++|||+++|++|+++|++|++.+|+.+.++++......       +..+|++++++++++++++. ++|+||+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------YPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------CTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-------EEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999999999999999999998887776554333       23589999999999999999 9999999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||||||+  ....+++.+.+.|+|++.+++|+.++|+++|+++|+|++++.|+||++||..+..+.+++.+|++|
T Consensus        75 LVnNAg~--~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~as  147 (252)
T d1zmta1          75 LVSNDIF--APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSA  147 (252)
T ss_dssp             EEEECCC--CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHH
T ss_pred             EEECCcC--CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccc
Confidence            9999997  124578999999999999999999999999999999999989999999999999999999999875

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-33  Score=208.87  Aligned_cols=151  Identities=26%  Similarity=0.337  Sum_probs=132.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEE---ecChhhHH---HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAIL---ARDLGRLS---RFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~---~r~~~~~~---~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .|+++||||++|||+++|++|+++|++|+.+   .|+.+..+   +..+.+.. .+.++..+.+|++|+++++++++++.
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALAC-PPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTC-CTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhc-cCCceEEEeccccchHhhhhhhhhcc
Confidence            6899999999999999999999999985544   55544433   44444444 56789999999999999999888764


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELC  165 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  165 (167)
                       .+++|++|||+|.   ...+++.+.+.|+|++.+++|+.+++++++.++|.|.+++.|+||++||.++..|.|++++|+
T Consensus        81 -~g~idilvnnag~---~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~  156 (285)
T d1jtva_          81 -EGRVDVLVCNAGL---GLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (285)
T ss_dssp             -TSCCSEEEECCCC---CCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             -ccchhhhhhcccc---cccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHH
Confidence             4789999999999   788899999999999999999999999999999999999899999999999999999999999


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       157 as  158 (285)
T d1jtva_         157 AS  158 (285)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.5e-33  Score=203.98  Aligned_cols=153  Identities=23%  Similarity=0.293  Sum_probs=138.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEe-cChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILA-RDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++||++|||||++|||+++|+.|+++|++|++.+ |+.+.++++.++++. .+.++..+.+|++|+++++++++++. +
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH-cCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999875 556667888888887 78899999999999999999999999 9


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc-CCCCccccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN-GIAGFSELC  165 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~y~  165 (167)
                      +|+||++|||||.   .+..++.+.+.++|++.+++|+.++++++|.++|+|+++  |++++++|..+.. +.+++..|+
T Consensus        82 ~g~idilinnag~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~  156 (259)
T d1ja9a_          82 FGGLDFVMSNSGM---EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYA  156 (259)
T ss_dssp             HSCEEEEECCCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHH
T ss_pred             cCCCcEEEecccc---ccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHH
Confidence            9999999999999   788899999999999999999999999999999999764  5787777766644 688999998


Q ss_pred             cC
Q 031016          166 KN  167 (167)
Q Consensus       166 as  167 (167)
                      +|
T Consensus       157 as  158 (259)
T d1ja9a_         157 GS  158 (259)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.98  E-value=5.6e-32  Score=197.60  Aligned_cols=149  Identities=19%  Similarity=0.309  Sum_probs=127.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..++    .+.++.++.+|++++++++++++++. ++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA----LEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----CCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----cCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999998877655543    56789999999999999999999999 99


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      |++|++|||||.   ....++.+.+.++|++.+++|+.+++.++|.+.|.|.++  +.++++|+ .+..+.|++..|+++
T Consensus        78 g~iDiLinnAg~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss-~a~~~~~~~~~Y~~s  151 (241)
T d2a4ka1          78 GRLHGVAHFAGV---AHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGS-VAGLGAFGLAHYAAG  151 (241)
T ss_dssp             SCCCEEEEGGGG---TTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECC-CTTCCHHHHHHHHHC
T ss_pred             CCccEecccccc---ccccchhhhhccccccccccccccccccccccccccccc--cceeeccc-cccccccCccccchh
Confidence            999999999998   778999999999999999999999999999999998764  35555544 555666888888875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.97  E-value=1.2e-31  Score=196.49  Aligned_cols=152  Identities=13%  Similarity=0.141  Sum_probs=130.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHH---HcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH---
Q 031016           12 RGIAAIVGVGPNLGRSIARKFA---HEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL---   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~---   85 (167)
                      .|++|||||++|||+++|++|+   ++|++|++.+|++++++++.+..+  .+.++.++.+|++|+++++++++++.   
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK--NHSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH--HCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh--cCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            5899999999999999999997   479999999999988887765443  45689999999999999999999874   


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-----------CCceEEEecCCcc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-----------GKGTIIFTGCSAS  154 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~iss~~~  154 (167)
                      +++++|+||||||+  .....++.+.+.++|++.+++|+.+++.+++.++|.|+++           +.|++|+++|.++
T Consensus        80 ~~~~iDiLvnNAg~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g  157 (248)
T d1snya_          80 KDQGLNVLFNNAGI--APKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  157 (248)
T ss_dssp             GGGCCSEEEECCCC--CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hcCCcceEEeeccc--cccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence            57899999999998  2334467889999999999999999999999999999874           3689999999988


Q ss_pred             ccC---CCCccccccC
Q 031016          155 LNG---IAGFSELCKN  167 (167)
Q Consensus       155 ~~~---~~~~~~y~as  167 (167)
                      ..+   .+++.+|++|
T Consensus       158 ~~~~~~~~~~~~Y~aS  173 (248)
T d1snya_         158 SIQGNTDGGMYAYRTS  173 (248)
T ss_dssp             CSTTCCSCCCHHHHHH
T ss_pred             ccCCCCCCChHHHHHH
Confidence            654   4567889875

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.97  E-value=4.1e-31  Score=196.14  Aligned_cols=154  Identities=15%  Similarity=0.286  Sum_probs=138.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++||+++||||++|||++++++|+++|++|++++|+ ++.++++.+.++. .+.++.++.+|++++++++++++++. 
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh-hCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999876 5667888888877 78899999999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc-CCCCcccc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN-GIAGFSEL  164 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~y  164 (167)
                      +++++|++|||+|.   ....++.+.+.++|++.+++|+.+++.++|.+.|.|.++  |++++++|..+.. +.++++.|
T Consensus        93 ~~g~idilV~nag~---~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y  167 (272)
T d1g0oa_          93 IFGKLDIVCSNSGV---VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVY  167 (272)
T ss_dssp             HHSCCCEEEECCCC---CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHH
T ss_pred             HhCCCCcccccccc---chhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhhH
Confidence            89999999999998   788899999999999999999999999999999999874  6899998887654 56777888


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       168 ~as  170 (272)
T d1g0oa_         168 SGS  170 (272)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=7.1e-31  Score=193.23  Aligned_cols=152  Identities=17%  Similarity=0.180  Sum_probs=132.8

Q ss_pred             CCCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++||||+|  |||+++|++|+++|++|++.+|+++..++..+.. . .+.+...+.+|++++++++++++++. 
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLA-E-ALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-H-HTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhh-h-ccCcccccccccCCHHHHHHHHHHHHH
Confidence            46899999999987  8999999999999999999999876555544433 3 34567789999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCC----CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQP----TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      ++|+||++|||||.   .+.    .++.+.+.++|+..+++|+.+++.++|.+.|.|++.  |+||++||..+..+.|++
T Consensus        83 ~~g~iDilVnnag~---~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~~~~  157 (256)
T d1ulua_          83 AFGGLDYLVHAIAF---APREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKY  157 (256)
T ss_dssp             HHSSEEEEEECCCC---CCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBCTTC
T ss_pred             hcCCceEEEecccc---ccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCCCCc
Confidence            99999999999997   332    356788899999999999999999999999999763  899999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      .+|++|
T Consensus       158 ~~Y~as  163 (256)
T d1ulua_         158 NVMAIA  163 (256)
T ss_dssp             HHHHHH
T ss_pred             hHHHHH
Confidence            999874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=6.8e-31  Score=191.05  Aligned_cols=140  Identities=22%  Similarity=0.256  Sum_probs=122.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +++|++|||||++|||+++|++|+++|++|++++|+++.+++        .+  ..++.+|+++.  ++.+++   ++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------~~--~~~~~~Dv~~~--~~~~~~---~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR--------SG--HRYVVCDLRKD--LDLLFE---KVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------TC--SEEEECCTTTC--HHHHHH---HSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------cC--CcEEEcchHHH--HHHHHH---HhCC
Confidence            579999999999999999999999999999999998764432        22  24577999864  444433   5699


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||++|||||.   ....++.+.+.++|++.+++|+.++++++|.++|.|++++.|+||+++|..+..+.++...|++|
T Consensus        67 iD~lVnnAG~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~as  141 (234)
T d1o5ia_          67 VDILVLNAGG---PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA  141 (234)
T ss_dssp             CSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CcEEEecccc---cCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhH
Confidence            9999999998   77889999999999999999999999999999999999989999999999999999999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.97  E-value=3.6e-30  Score=192.79  Aligned_cols=161  Identities=17%  Similarity=0.207  Sum_probs=146.9

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      |.++.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++++++++++++.
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~   96 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE   96 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh
Confidence            55556789999999999999999999999999999999999999999998888765788899999999999999999999


Q ss_pred             HH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCccccCCCCc
Q 031016           84 VL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        84 ~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~  161 (167)
                      +. +++++|++|||||.   ....++...+.++|+..+.+|+..++.+.+.+.+.+... ..+.+++++|..+..+.+++
T Consensus        97 ~~~~~g~iDilvnnAg~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~  173 (294)
T d1w6ua_          97 LIKVAGHPNIVINNAAG---NFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV  173 (294)
T ss_dssp             HHHHTCSCSEEEECCCC---CCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC
T ss_pred             hhhhccccchhhhhhhh---ccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc
Confidence            99 99999999999999   788899999999999999999999999998887777654 46788999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      .+|++|
T Consensus       174 ~~Ysas  179 (294)
T d1w6ua_         174 VPSASA  179 (294)
T ss_dssp             HHHHHH
T ss_pred             chHHHH
Confidence            999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.6e-30  Score=187.34  Aligned_cols=146  Identities=15%  Similarity=0.190  Sum_probs=128.4

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +++|+++||||++|||+++++.|+++|++|++.+|++++++++.+      ...+....+|+.+++.++...+.   .++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~------~~~~~~~~~d~~~~~~~~~~~~~---~~~   74 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------YPGIQTRVLDVTKKKQIDQFANE---VER   74 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG------STTEEEEECCTTCHHHHHHHHHH---CSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------ccCCceeeeeccccccccccccc---ccc
Confidence            689999999999999999999999999999999999877655432      23467788899988777665554   589


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc-cCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL-NGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~y~as  167 (167)
                      +|++|||+|.   .+.+++.+.+.|+|+..+++|+.+++.++|.+.|.|.+++.|+||++||..+. .+.+++.+|++|
T Consensus        75 id~lVn~ag~---~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~s  150 (245)
T d2ag5a1          75 LDVLFNVAGF---VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTT  150 (245)
T ss_dssp             CSEEEECCCC---CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHH
T ss_pred             ceeEEecccc---cCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHH
Confidence            9999999999   78889999999999999999999999999999999999999999999998875 578888999864

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=2.5e-29  Score=184.31  Aligned_cols=151  Identities=13%  Similarity=0.162  Sum_probs=126.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      ..|++|||||++|||+++|++|+++|+  +|++.+|+.++++++.+    ..+.++.++.+|++++++++++++++. .+
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            469999999999999999999999996  68888999888766543    256689999999999999999999997 65


Q ss_pred             C--CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-----------CceEEEecCCcc
Q 031016           88 G--FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-----------KGTIIFTGCSAS  154 (167)
Q Consensus        88 ~--~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----------~g~iv~iss~~~  154 (167)
                      +  +||++|||||+  ..+..++.+.+.++|++.+++|+.+++++++.++|+|++++           .++++++++...
T Consensus        78 ~~~~idilinnAG~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          78 GSDGLSLLINNAGV--LLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             GGGCCCEEEECCCC--CCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             CCCCeEEEEEcCcc--cCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            4  59999999998  13446788899999999999999999999999999998752           378999998776


Q ss_pred             ccCC-------CCccccccC
Q 031016          155 LNGI-------AGFSELCKN  167 (167)
Q Consensus       155 ~~~~-------~~~~~y~as  167 (167)
                      ..+.       .++.+|++|
T Consensus       156 ~~~~~~~~~~~~~~~aY~aS  175 (250)
T d1yo6a1         156 SITDNTSGSAQFPVLAYRMS  175 (250)
T ss_dssp             CSTTCCSTTSSSCBHHHHHH
T ss_pred             cccCCcccccchhHHHHHHH
Confidence            5433       234568764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-28  Score=180.07  Aligned_cols=155  Identities=21%  Similarity=0.264  Sum_probs=136.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++    +.+.....+|+.+.+.++.....+. ..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCCccccccccccccccccccccccccc
Confidence            468999999999999999999999999999999999999888877765    4578889999999999999999988 88


Q ss_pred             CCccEEEEcCCCCCC---CCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc------CCceEEEecCCccccCC
Q 031016           88 GFVEVLVYNAYQPVS---WQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER------GKGTIIFTGCSASLNGI  158 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~  158 (167)
                      +.+|.++++++....   ....++.+.+.|+|++++++|+.++++++|++.|.|..+      +.|+||++||..+..|.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            999999999876211   122355678899999999999999999999999998654      46899999999999999


Q ss_pred             CCccccccC
Q 031016          159 AGFSELCKN  167 (167)
Q Consensus       159 ~~~~~y~as  167 (167)
                      |++.+|++|
T Consensus       158 ~~~~~Y~as  166 (248)
T d2o23a1         158 VGQAAYSAS  166 (248)
T ss_dssp             TTCHHHHHH
T ss_pred             CCchHHHHH
Confidence            999999875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=2.5e-28  Score=179.67  Aligned_cols=148  Identities=18%  Similarity=0.190  Sum_probs=131.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh---hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDL---GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +++++||||++|||+++|++|+++|+ +|++++|+.   +..+++.++++. .+.++.++.||++|+++++++++.+.+.
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHHHHhhcccccc
Confidence            67999999999999999999999999 588888864   446677777776 7889999999999999999999987755


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      +++|++|||+|.   ....++.+.+.++|+.++++|+.+++++.+.+    .+.+.++||++||.++..|.+++++|++|
T Consensus        88 ~~i~~vv~~ag~---~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAa  160 (259)
T d2fr1a1          88 VPLSAVFHAAAT---LDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPG  160 (259)
T ss_dssp             SCEEEEEECCCC---CCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             cccccccccccc---ccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHH
Confidence            689999999999   78889999999999999999999999988764    34456899999999999999999999874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.9e-27  Score=172.84  Aligned_cols=141  Identities=16%  Similarity=0.141  Sum_probs=120.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h--c
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S--L   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~--~   87 (167)
                      ++|+++||||++|||++++++|+++|++|+++++++..           .........+|.++.++.+.+...+. .  .
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE-----------EASASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT-----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc-----------cccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            48999999999999999999999999999999886542           22345566778888888887777775 3  3


Q ss_pred             CCccEEEEcCCCCCCCCC-CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCcccccc
Q 031016           88 GFVEVLVYNAYQPVSWQP-TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCK  166 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~a  166 (167)
                      +++|++|||||.   +.. .+..+.+.|+|++++++|+.+++++++.++|+|++  .|+||++||.++..+.+++.+|++
T Consensus        70 ~~iD~lInnAG~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  144 (236)
T d1dhra_          70 QKVDAILCVAGG---WAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGM  144 (236)
T ss_dssp             CCEEEEEECCCC---CCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             CCceEEEECCcc---cccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHH
Confidence            589999999997   443 45667778999999999999999999999999965  489999999999999999999997


Q ss_pred             C
Q 031016          167 N  167 (167)
Q Consensus       167 s  167 (167)
                      |
T Consensus       145 s  145 (236)
T d1dhra_         145 A  145 (236)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.94  E-value=1.2e-26  Score=172.28  Aligned_cols=153  Identities=16%  Similarity=0.233  Sum_probs=124.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec-ChhhHHHHHHHHHhhcCCcEEEEE-----------------eecCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR-DLGRLSRFADEIAREEKSQVFAIR-----------------IDCSD   73 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~-----------------~D~~~   73 (167)
                      ..+++||||++|||+++|++|+++|++|++.++ +.+..+++.+++....+.....+.                 +|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            368999999999999999999999999999866 556677888888765555555554                 55999


Q ss_pred             HHHHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHH--------------HHhhhhhHHHHHHHHHHHHhh
Q 031016           74 SRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQ--------------KSIAISSLGAFLCAQQVLSGM  138 (167)
Q Consensus        74 ~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~  138 (167)
                      +++++++++++. ++|+||+||||||.   ..+.++.+.+.++|+              ..+.+|+.+++++.|.+.+.+
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  158 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASS---FYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  158 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCC---CCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCc---cCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchh
Confidence            999999999999 99999999999999   777788777766665              478999999999999988765


Q ss_pred             H------hcCCceEEEecCCccccCCCCccccccC
Q 031016          139 V------ERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus       139 ~------~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      .      +.+.++||+++|..+..+.+++.+|++|
T Consensus       159 ~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~as  193 (284)
T d1e7wa_         159 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA  193 (284)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred             hhhHHHhcCCCCcccccccccccCCccceeeeccc
Confidence            3      3346899999999999999999999874

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=3.8e-27  Score=171.17  Aligned_cols=139  Identities=15%  Similarity=0.141  Sum_probs=116.6

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH---hcCC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL---SLGF   89 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~~   89 (167)
                      +.++||||++|||++++++|+++|++|++++|+++.           .........+|+.+.+..+...+.+.   ++++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND-----------QADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT-----------TSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchh-----------cccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            457999999999999999999999999999998653           12344556678887777776666665   4589


Q ss_pred             ccEEEEcCCCCCCCCCC-CCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCccccccC
Q 031016           90 VEVLVYNAYQPVSWQPT-NFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGFSELCKN  167 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  167 (167)
                      ||+||||||.   +... +..+.+.++|+.++++|+.++++++|.++|+|++  +|+||++||..+..+.+++.+|++|
T Consensus        72 iD~linnAG~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~as  145 (235)
T d1ooea_          72 VDGVFCVAGG---WAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMA  145 (235)
T ss_dssp             EEEEEECCCC---CCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             eeEEEECCcc---cccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHH
Confidence            9999999997   4443 5556667899999999999999999999999965  4899999999999999999999975

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=2e-25  Score=169.31  Aligned_cols=152  Identities=12%  Similarity=0.097  Sum_probs=120.5

Q ss_pred             CcEEEEEc--CCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC-----------CcEEEEE----------
Q 031016           12 RGIAAIVG--VGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-----------SQVFAIR----------   68 (167)
Q Consensus        12 ~~~~lItG--a~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~----------   68 (167)
                      +|++||||  ++.|||+++|+.|+++|++|++.+++................           .......          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            79999999  557999999999999999999998876654433332221111           1122232          


Q ss_pred             ----------eecCCHHHHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHh
Q 031016           69 ----------IDCSDSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSG  137 (167)
Q Consensus        69 ----------~D~~~~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  137 (167)
                                +|++++++++++++.+. ++|+||++|||+|... ...+++.+.+.++|++.+++|+++++.++|++.|+
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~-~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAK-EVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCT-TTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeecccccccc-ccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      36678888999999999 9999999999999721 12357889999999999999999999999999999


Q ss_pred             hHhcCCceEEEecCCccccCCCCc-ccccc
Q 031016          138 MVERGKGTIIFTGCSASLNGIAGF-SELCK  166 (167)
Q Consensus       138 ~~~~~~g~iv~iss~~~~~~~~~~-~~y~a  166 (167)
                      |++  .|+||++||..+..+.|++ ..|++
T Consensus       161 m~~--~GsIv~iss~~~~~~~p~y~~~y~a  188 (329)
T d1uh5a_         161 MKP--QSSIISLTYHASQKVVPGYGGGMSS  188 (329)
T ss_dssp             EEE--EEEEEEEECGGGTSCCTTCTTTHHH
T ss_pred             ccc--ccccccceeehhcccccccchhhhh
Confidence            965  4899999999999999874 56765

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.91  E-value=6.5e-24  Score=158.44  Aligned_cols=157  Identities=18%  Similarity=0.047  Sum_probs=116.1

Q ss_pred             CCCCCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc--------C--Cc-EEEEEee---
Q 031016            7 SGSSCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE--------K--SQ-VFAIRID---   70 (167)
Q Consensus         7 ~~~~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--------~--~~-~~~~~~D---   70 (167)
                      ++.+++|++|||||++  |||+++|++|+++|++|++.+|++..............        .  .. -....+|   
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            4567899999999876  99999999999999999999987654333222221100        0  01 1233333   


Q ss_pred             -----------------cCCHHHHHHHHHHHH-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHH
Q 031016           71 -----------------CSDSRSVREAFEGVL-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQ  132 (167)
Q Consensus        71 -----------------~~~~~~~~~~~~~~~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  132 (167)
                                       .++..+++++++++. ++|+||++|||||... ....++.+.+.|+|++.+++|+.+++.+++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGP-EVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCT-TTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccccccccccc-ccccchhhhhcccccccccchhhhhhhhhh
Confidence                             345566788999998 8999999999999721 234688999999999999999999999999


Q ss_pred             HHHHhhHhcCCceEEEecCCccccC-CCCcccccc
Q 031016          133 QVLSGMVERGKGTIIFTGCSASLNG-IAGFSELCK  166 (167)
Q Consensus       133 ~~~~~~~~~~~g~iv~iss~~~~~~-~~~~~~y~a  166 (167)
                      ++++.+.++  |+++++++...... .+....|++
T Consensus       162 ~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~  194 (297)
T d1d7oa_         162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSS  194 (297)
T ss_dssp             HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHH
T ss_pred             HHHHHhhcC--Ccceeeeehhhcccccccccceec
Confidence            999998775  46667666665443 456666764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=8.1e-24  Score=155.12  Aligned_cols=151  Identities=14%  Similarity=0.128  Sum_probs=128.3

Q ss_pred             CCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           10 SCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        10 ~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++|++|||||++  |||+++|+.|+++|++|++.+|+++..+... ++.. ...+......|+++..+++..+.++. .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVE-EFAA-QLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHH-HHHH-HTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHh-hcCCcceeecccchHHHHHHHHHHhhhc
Confidence            5799999999998  8999999999999999999999866555444 4433 44566778899999999999999999 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCC-----CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTN-----FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      .+++|++|+|++.   ....+     .+..+.+.|...+++|+.+.+.+.+.+.+.+.+  ++.||++||..+..+.|++
T Consensus        81 ~~~~d~~v~~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~  155 (258)
T d1qsga_          81 WPKFDGFVHSIGF---APGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNY  155 (258)
T ss_dssp             CSSEEEEEECCCC---CCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTT
T ss_pred             ccccceEEEeecc---cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCc
Confidence            9999999999987   33333     245677889999999999999999999999865  3689999999999999999


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       156 ~~Y~~s  161 (258)
T d1qsga_         156 NVMGLA  161 (258)
T ss_dssp             THHHHH
T ss_pred             HHHHHH
Confidence            999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=3.4e-23  Score=150.08  Aligned_cols=143  Identities=20%  Similarity=0.227  Sum_probs=118.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .|++|||||++|||+++|++|+++|++|++++|+++             +.+.....+|++++.....+..........+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-------------cccceEeeccccchhhhHHHHHhhhcccccc
Confidence            489999999999999999999999999999999764             2356778899999999998888777334556


Q ss_pred             EEEEcCCCCC-CCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHh------hHhcCCceEEEecCCccccCCCCcccc
Q 031016           92 VLVYNAYQPV-SWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSG------MVERGKGTIIFTGCSASLNGIAGFSEL  164 (167)
Q Consensus        92 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~g~iv~iss~~~~~~~~~~~~y  164 (167)
                      ..+.+++... ..........+.+.|++.+++|+.+++.+++.+.+.      |.+++.|+||++||..+..+.+++.+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y  147 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  147 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence            6666665421 122345567788999999999999999999999998      455567999999999999999999999


Q ss_pred             ccC
Q 031016          165 CKN  167 (167)
Q Consensus       165 ~as  167 (167)
                      ++|
T Consensus       148 ~as  150 (241)
T d1uaya_         148 AAS  150 (241)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.89  E-value=3.7e-22  Score=146.49  Aligned_cols=152  Identities=16%  Similarity=0.192  Sum_probs=122.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-HHHHHHHHHhhcCCcEEEEEeecCC----HHHHHHHHHHHH-h
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-LSRFADEIAREEKSQVFAIRIDCSD----SRSVREAFEGVL-S   86 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~----~~~~~~~~~~~~-~   86 (167)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++....+.+.....+|..+    ++.++++++.+. +
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999988554 5777888877567777777766643    567778888888 8


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCC-----------CCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-----CCceEEEec
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFT-----------EISFDSFQKSIAISSLGAFLCAQQVLSGMVER-----GKGTIIFTG  150 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~is  150 (167)
                      +|++|++|||||+   ..+.++.           ....+.+...+..|+.+++...+...+.+...     ..+.+++++
T Consensus        82 ~g~iDilvnnAG~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (266)
T d1mxha_          82 FGRCDVLVNNASA---YYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  158 (266)
T ss_dssp             HSCCCEEEECCCC---CCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             hCCCCEEEECCcc---CCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh
Confidence            8999999999998   4444432           33456788889999999999999888877653     357999999


Q ss_pred             CCccccCCCCccccccC
Q 031016          151 CSASLNGIAGFSELCKN  167 (167)
Q Consensus       151 s~~~~~~~~~~~~y~as  167 (167)
                      +..+..+.|++..|++|
T Consensus       159 ~~~~~~~~~~~~~Y~as  175 (266)
T d1mxha_         159 DAMTDLPLPGFCVYTMA  175 (266)
T ss_dssp             CGGGGSCCTTCHHHHHH
T ss_pred             hccccccCcchhhhhhh
Confidence            99999999999999864

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.88  E-value=1.7e-22  Score=149.22  Aligned_cols=152  Identities=17%  Similarity=0.192  Sum_probs=111.1

Q ss_pred             CCCCcEEEEEcCCC--chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGVGP--NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa~~--~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|++|||||+|  |||+++|++|+++|++|++++|+++ +++.++++.. .+.+..++.+|++++++++++++++. 
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQ-ELNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHh-hCCceeEeeecccchhhHHHHHHHHHH
Confidence            36899999999875  8999999999999999999999854 4445555655 55667788999999999999999999 


Q ss_pred             hcCCccEEEEcCCCCCCCCCCC----CCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCCc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTN----FTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAGF  161 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  161 (167)
                      .++++|++|+|+|.   .+...    ......+.+...+.++..+.+.+.+...+.+..  .+.|+++|+.....+.+..
T Consensus        80 ~~g~id~lV~nag~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~~~~~~~~~~~  154 (274)
T d2pd4a1          80 DLGSLDFIVHSVAF---APKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHY  154 (274)
T ss_dssp             HTSCEEEEEECCCC---CCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTC
T ss_pred             HcCCCCeEEeeccc---ccccccccccccccchhhhhhhcccccccccccccccccccc--Ccceeeecccccccccccc
Confidence            89999999999998   33332    223344444455555555555555554443322  3456667776667777777


Q ss_pred             cccccC
Q 031016          162 SELCKN  167 (167)
Q Consensus       162 ~~y~as  167 (167)
                      ..|++|
T Consensus       155 ~~y~as  160 (274)
T d2pd4a1         155 NVMGLA  160 (274)
T ss_dssp             HHHHHH
T ss_pred             hhhhHH
Confidence            888753

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.88  E-value=3.1e-22  Score=147.22  Aligned_cols=153  Identities=14%  Similarity=0.093  Sum_probs=122.7

Q ss_pred             CCCCcEEEEEcC--CCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016            9 SSCRGIAAIVGV--GPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus         9 ~~~~~~~lItGa--~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .+++|+++||||  +.|||+++|++|+++|++|++++|+.+++.+   .+....+.+...+.+|++++++++++++.+. 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcCCceeeEeeecccccccccccchhhh
Confidence            368999999995  4689999999999999999999998776533   2222266778889999999999999988885 


Q ss_pred             h---cCCccEEEEcCCCCC--CCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCCCC
Q 031016           86 S---LGFVEVLVYNAYQPV--SWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGIAG  160 (167)
Q Consensus        86 ~---~~~i~~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  160 (167)
                      .   .+++|++|||+|...  .....++.+.+.++|...+.+|+..++...+.+.+.+..   +.+++++|.....+.|+
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~  156 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPA  156 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTT
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCcc
Confidence            4   478999999999721  112335677889999999999999999999998876544   45666777778888899


Q ss_pred             ccccccC
Q 031016          161 FSELCKN  167 (167)
Q Consensus       161 ~~~y~as  167 (167)
                      +..|++|
T Consensus       157 ~~~y~~s  163 (268)
T d2h7ma1         157 YNWMTVA  163 (268)
T ss_dssp             THHHHHH
T ss_pred             cchhhcc
Confidence            9998764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.76  E-value=1.2e-18  Score=122.20  Aligned_cols=113  Identities=18%  Similarity=0.151  Sum_probs=94.4

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.++++++.+.+....  ++....+|+++.+++++++      
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc--chhhhhhhcccHHHHHHHh------
Confidence            45789999999999999999999999999999999999999999988887633  3456788999999887654      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHH
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVL  135 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  135 (167)
                      +++|++|||+|.   .    +...+.|+|+..+++|+.+.++....+.
T Consensus        91 ~~iDilin~Ag~---g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~  131 (191)
T d1luaa1          91 KGAHFVFTAGAI---G----LELLPQAAWQNESSIEIVADYNAQPPLG  131 (191)
T ss_dssp             TTCSEEEECCCT---T----CCCBCHHHHHTCTTCCEEEECCCSSSCS
T ss_pred             cCcCeeeecCcc---c----cccCCHHHHHhhhcceeehhHhhHHHHH
Confidence            478999999997   2    3457889999999999887776554443

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.5e-16  Score=119.75  Aligned_cols=129  Identities=17%  Similarity=0.167  Sum_probs=93.3

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-----hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-----RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .|+||||||+|-||..++++|+++|++|++++|...     +++.+...... ...++.++.+|++|.+++++++..+  
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT-CNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh-cCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            489999999999999999999999999999998542     23333332222 4557999999999999999999876  


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                        .+|+++|+|+.   ....    .+.++....+++|+.++.++++++...-.+ +..++|++||..
T Consensus        78 --~~d~v~h~aa~---~~~~----~~~~~~~~~~~~Nv~gt~nllea~~~~~~~-~~~r~i~~SS~~  134 (357)
T d1db3a_          78 --QPDEVYNLGAM---SHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSE  134 (357)
T ss_dssp             --CCSEEEECCCC---CTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGG
T ss_pred             --CCCEEEEeecc---cccc----hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEEchh
Confidence              68999999997   2221    223556678999999999999887644222 234799999854

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.63  E-value=3.7e-15  Score=108.18  Aligned_cols=114  Identities=15%  Similarity=0.157  Sum_probs=93.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc-CC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL-GF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~-~~   89 (167)
                      .|+++||||++|||+++|++|+++|++|++++|++++                  ..+|+.+++..+....++. +. +.
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999999999999987542                  2469999998888877776 44 67


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +|++|+|||+   .+.       .+.|+....+|..+...+.+.+.+.+.+...+.+.++.+..
T Consensus        63 id~lv~~Ag~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (257)
T d1fjha_          63 MDGLVLCAGL---GPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CSEEEECCCC---CTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CcEEEEcCCC---CCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeecc
Confidence            9999999997   322       24578889999999999999999998887666666666543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=1.8e-15  Score=114.04  Aligned_cols=126  Identities=12%  Similarity=0.061  Sum_probs=94.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      +|||||+|-||..++++|+++|++|++++|............+.....++.++.+|++|.+.++++++..    ++|++|
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~----~~d~Vi   78 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH----AIDTVI   78 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT----TCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc----CCCEEE
Confidence            9999999999999999999999999998763222111112222214457899999999999999888864    689999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      |.|+.   ..    ...+.++....+++|+.++..+++.+...-    -.++|++||.+..
T Consensus        79 HlAa~---~~----~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~----v~~~i~~Ss~~vy  128 (338)
T d1udca_          79 HFAGL---KA----VGESVQKPLEYYDNNVNGTLRLISAMRAAN----VKNFIFSSSATVY  128 (338)
T ss_dssp             ECCSC---CC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEEEGGGG
T ss_pred             ECCCc---cc----hhhHHhCHHHHHHhHHHHHHHHHHHHHHhC----CCEEEecCcceEE
Confidence            99986   21    112334567889999999999999886542    2389999887654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=3.1e-14  Score=109.00  Aligned_cols=132  Identities=12%  Similarity=0.083  Sum_probs=98.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec----------------ChhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR----------------DLGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r----------------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      |+.+|||||+|-||.+++++|+++|++|++++.                +.....+.........+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            577999999999999999999999999999862                1112222233333325668999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           76 SVREAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        76 ~~~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      .++++++..    ++|+++|.|+.    ...+....+.+.....+++|+.++..+++.+...-.+   -++++.||...
T Consensus        81 ~l~~~~~~~----~~d~ViHlAa~----~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~---~~~i~~ss~~~  148 (393)
T d1i24a_          81 FLAESFKSF----EPDSVVHFGEQ----RSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE---CHLVKLGTMGE  148 (393)
T ss_dssp             HHHHHHHHH----CCSEEEECCSC----CCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT---CEEEEECCGGG
T ss_pred             HHHHHHHhh----cchheeccccc----cccccccccccccccccccccccccHHHHHHHHhccc---cceeecccccc
Confidence            999999876    79999999986    2223334556777889999999999999987643322   36677766544

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=4.8e-15  Score=111.96  Aligned_cols=128  Identities=12%  Similarity=0.114  Sum_probs=94.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .|++|||||+|-||..++++|+++|++|+++++... ........ ......++.++.+|++|.++++.++...    ++
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~   75 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLTKHHIPFYEVDLCDRKGLEKVFKEY----KI   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH-HHHHTSCCCEEECCTTCHHHHHHHHHHS----CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH-HhhcccCCeEEEeecCCHHHHHHHHhcc----CC
Confidence            378999999999999999999999999999875322 11211111 1114457888999999999999888763    79


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      |++||+|+.   ..    .....+.....+.+|+.++..+.+++...-    .-++|++||....
T Consensus        76 d~VihlAa~---~~----~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~----i~~~i~~SS~~vy  129 (347)
T d1z45a2          76 DSVIHFAGL---KA----VGESTQIPLRYYHNNILGTVVLLELMQQYN----VSKFVFSSSATVY  129 (347)
T ss_dssp             CEEEECCSC---CC----HHHHHHSHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEEEGGGG
T ss_pred             CEEEEcccc---cc----ccccccCcccccccchhhhHHHHHHHHhcc----cceEEeecceeee
Confidence            999999987   21    112234556788899999999999976432    2389999996643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.55  E-value=3.8e-14  Score=105.78  Aligned_cols=127  Identities=13%  Similarity=0.030  Sum_probs=92.9

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecC-hhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARD-LGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      .+|||||+|-||..++++|+++|++|+++++- .....+-.+.+.  ...++.++.+|+++.+++.++++..    ++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~--~~~~~~~i~~Di~~~~~l~~~~~~~----~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS--SLGNFEFVHGDIRNKNDVTRLITKY----MPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHH----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh--ccCCcEEEEcccCCHHHHHHHHHhc----CCce
Confidence            48999999999999999999999999998642 222222233332  2457889999999999999988875    6899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           93 LVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      +||+|+.   ...    ....++....+++|+.++.++++.+...    +..+.++.||.....+
T Consensus        76 Vih~aa~---~~~----~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~  129 (338)
T d1orra_          76 CFHLAGQ---VAM----TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYG  129 (338)
T ss_dssp             EEECCCC---CCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGT
T ss_pred             EEeeccc---ccc----cccccChHHHHHHHHHHHHHHHHhhhcc----cccccccccccccccc
Confidence            9999987   211    1223456788999999999999887643    2235666666555444

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.9e-14  Score=100.28  Aligned_cols=115  Identities=18%  Similarity=0.171  Sum_probs=83.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ..|.++||||+|.||.+++++|+++|++|.++.|+++++...       ....+.++.+|++|++++++++.      ..
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~gD~~d~~~l~~al~------~~   68 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVA------GQ   68 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHT------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------cccccccccccccchhhHHHHhc------CC
Confidence            467799999999999999999999999999999988764221       33467889999999998877765      47


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      |.+|+++|.   .......           +++..+..+    +++.+++.+-.++|++||.....
T Consensus        69 d~vi~~~g~---~~~~~~~-----------~~~~~~~~~----l~~aa~~~~v~r~i~~ss~~~~~  116 (205)
T d1hdoa_          69 DAVIVLLGT---RNDLSPT-----------TVMSEGARN----IVAAMKAHGVDKVVACTSAFLLW  116 (205)
T ss_dssp             SEEEECCCC---TTCCSCC-----------CHHHHHHHH----HHHHHHHHTCCEEEEECCGGGTS
T ss_pred             CEEEEEecc---CCchhhh-----------hhhHHHHHH----HHHHHHhcCCCeEEEEeeeeccC
Confidence            999999987   3222111           123333333    34445666666999999866543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.53  E-value=2.4e-14  Score=107.98  Aligned_cols=127  Identities=11%  Similarity=0.037  Sum_probs=96.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ++|.+|||||+|-||..+++.|+++|++|++++|+......+.+...  ....+.++.+|++|++.+.+++...    .+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~i~~~~~Dl~d~~~l~~~~~~~----~~   80 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF----QP   80 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH----CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh--cccCCeEEEeeccChHhhhhhhhhc----hh
Confidence            68999999999999999999999999999999997665444433322  2346889999999999999888865    78


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +.+++.++.   .    ....+.+.....+++|+.++..+++++...-   ....+++.|+..
T Consensus        81 ~~v~~~aa~---~----~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~---~~~~~~~~s~~~  133 (356)
T d1rkxa_          81 EIVFHMAAQ---P----LVRLSYSEPVETYSTNVMGTVYLLEAIRHVG---GVKAVVNITSDK  133 (356)
T ss_dssp             SEEEECCSC---C----CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC---CCCEEEEECCGG
T ss_pred             hhhhhhhcc---c----cccccccCCccccccccccchhhhhhhhccc---cccccccccccc
Confidence            999999986   1    1223346677889999999999998876432   223555555443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.9e-14  Score=107.21  Aligned_cols=129  Identities=17%  Similarity=0.150  Sum_probs=91.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-----hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-----RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      |+||||||+|-||..++++|+++|++|+.++|...     .++.+..........++.++.+|++|++.+.+++...   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            55699999999999999999999999999998542     2222222222113457899999999999999999876   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                       .++.+++.++.   ...    ....+.....+++|+.++..+...+..+-.. +..++|++||.+
T Consensus        79 -~~~~v~~~~a~---~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~  135 (347)
T d1t2aa_          79 -KPTEIYNLGAQ---SHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSE  135 (347)
T ss_dssp             -CCSEEEECCSC---CCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGG
T ss_pred             -ccceeeeeeec---ccc----chhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchh
Confidence             67888888876   211    1223455667899999999998887654332 124899999855

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.1e-13  Score=104.07  Aligned_cols=128  Identities=12%  Similarity=0.112  Sum_probs=93.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec------ChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR------DLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r------~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .|.+|||||+|-||.+++++|+++|++|+++++      +.....+..+.+......++.++.+|++|.+.+++++..  
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc--
Confidence            377899999999999999999999999999864      122222222333322456899999999999999988876  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                        ..++.++|.|+.   ..    ...+.++....+++|+.+...+.+++..    .+-.+++++||...
T Consensus        80 --~~~~~i~h~Aa~---~~----~~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~  135 (346)
T d1ek6a_          80 --YSFMAVIHFAGL---KA----VGESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATV  135 (346)
T ss_dssp             --CCEEEEEECCSC---CC----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             --cccccccccccc---cC----cHhhHhCHHHHHHhhhcccccccchhhh----cCccccccccccee
Confidence              478899999987   21    1122344567789999999988887643    33348888887654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.46  E-value=2e-13  Score=102.22  Aligned_cols=131  Identities=21%  Similarity=0.216  Sum_probs=92.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh-----hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG-----RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      .|++|||||+|-||..+++.|+++|++|+.++|...     +...+...........+.++.+|+++.+.+++.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            388999999999999999999999999999998432     2222222221113346889999999999999988864  


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                        ++|++||.|+.   ..    .....+.....++.|..+...+...+.....+.. ..++++.||..
T Consensus        79 --~~D~Vih~Aa~---~~----~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~  137 (339)
T d1n7ha_          79 --KPDEVYNLAAQ---SH----VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE  137 (339)
T ss_dssp             --CCSEEEECCSC---CC----HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG
T ss_pred             --ccchhhhcccc---cc----ccccccCccccccccccccchhhhhhhhcccccccceeeeecccce
Confidence              79999999987   11    1122355677889999999998888765544432 23455555543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.46  E-value=3.8e-13  Score=101.24  Aligned_cols=126  Identities=12%  Similarity=0.111  Sum_probs=94.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +||++|||||+|-||..++++|+++|++|+++.|+.++...+.+...... ......+..|+++.+++++++.      .
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   83 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------G   83 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------T
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------c
Confidence            58999999999999999999999999999999998877666554433322 3335567789999987776554      5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|.++++++.   ..   . ..   .....+.+|+.++.++++.+...-   +..++|++||..+.
T Consensus        84 ~~~v~~~a~~---~~---~-~~---~~~~~~~~nv~gt~~ll~~~~~~~---~v~~~i~~SS~~~~  136 (342)
T d1y1pa1          84 AAGVAHIASV---VS---F-SN---KYDEVVTPAIGGTLNALRAAAATP---SVKRFVLTSSTVSA  136 (342)
T ss_dssp             CSEEEECCCC---CS---C-CS---CHHHHHHHHHHHHHHHHHHHHTCT---TCCEEEEECCGGGT
T ss_pred             chhhhhhccc---cc---c-cc---cccccccchhhhHHHHHHhhhccc---ccccccccccceee
Confidence            7999999986   21   1 12   234567889999999998876431   23599999997653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.44  E-value=2.8e-13  Score=100.68  Aligned_cols=125  Identities=17%  Similarity=0.063  Sum_probs=89.4

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH-HHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL-SRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      |+||||||+|.||+.++++|+++|++|+.++|..... .+-.+.+.  ...++.++.+|++|.+.+++.+...    ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc--ccCCcEEEEccccChHHhhhhhccc----ccc
Confidence            6899999999999999999999999999998854321 11122221  2346899999999999999888875    577


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSA  153 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  153 (167)
                      +++++++.   ....    ...+.....++.|+.++..++..+...-.+   -++++.|+..
T Consensus        75 ~~~~~a~~---~~~~----~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~---~~~i~~Ss~~  126 (321)
T d1rpna_          75 EVYNLAAQ---SFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQFSPE---TRFYQASTSE  126 (321)
T ss_dssp             EEEECCSC---CCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHHCTT---SEEEEEEEGG
T ss_pred             cccccccc---cccc----ccccchHHHHhhhhhchHHHHHHHHHhCCC---cccccccchh
Confidence            88888765   2111    112345677899999999998887643222   3666665543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.41  E-value=8e-13  Score=99.23  Aligned_cols=128  Identities=14%  Similarity=0.050  Sum_probs=92.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh----hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL----GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ..|++|||||+|.||..++++|.++|++|++++|..    ...+............++.++.+|..|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            468999999999999999999999999999998632    222222222111133468999999999887654333    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                        ..+.+++.++.   ..    ...+.++....+++|+.++..+.+.+...    +..++|++||....
T Consensus        91 --~~~~v~~~~a~---~~----~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vy  146 (341)
T d1sb8a_          91 --GVDYVLHQAAL---GS----VPRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTY  146 (341)
T ss_dssp             --TCSEEEECCSC---CC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGG
T ss_pred             --ccccccccccc---cc----ccccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceee
Confidence              56888888765   11    12245777889999999999999987643    33499999987753

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.40  E-value=2.3e-13  Score=103.35  Aligned_cols=126  Identities=13%  Similarity=0.102  Sum_probs=91.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEE-EecChh--hHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLG--RLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~-~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +|||||+|-||..++++|++.|+.|++ +++...  ..... +.+.  ...++.++.+|++|.+.++.+++..    .+|
T Consensus         3 ILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~----~~d   75 (361)
T d1kewa_           3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS--ESNRYNFEHADICDSAEITRIFEQY----QPD   75 (361)
T ss_dssp             EEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHHHH----CCS
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-Hhhh--hcCCcEEEEccCCCHHHHHHHHHhC----CCC
Confidence            899999999999999999999997544 443211  11111 1111  2457999999999999999888864    799


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-----CCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-----GKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~  154 (167)
                      ++||+|+.   ...    ..+.++....+++|+.++..+.+.+.....+.     +..++|++||...
T Consensus        76 ~VihlAa~---~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v  136 (361)
T d1kewa_          76 AVMHLAAE---SHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV  136 (361)
T ss_dssp             EEEECCSC---CCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG
T ss_pred             EEEECccc---cch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee
Confidence            99999986   211    12234556789999999999999988765432     2248999999664

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=8.1e-12  Score=92.46  Aligned_cols=110  Identities=15%  Similarity=0.128  Sum_probs=83.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .|.+|||||+|-||.+++++|+++|+.++++++..                     .+|+.+.+.++.++..-    .+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~~----~~d   56 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE----RID   56 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH----CCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccccCHHHHHHHHhhc----CCC
Confidence            46799999999999999999999999887765432                     15899999998887753    689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      .+++.|+.   ....   .....+..+.+++|+.++.++++++...    +--++|++||.+..-
T Consensus        57 ~v~~~a~~---~~~~---~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg  111 (315)
T d1e6ua_          57 QVYLAAAK---VGGI---VANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYP  111 (315)
T ss_dssp             EEEECCCC---CCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSC
T ss_pred             EEEEcchh---cccc---ccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcC
Confidence            99999976   2211   1223455667889999999998887543    233899999977543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.2e-12  Score=93.56  Aligned_cols=121  Identities=12%  Similarity=0.051  Sum_probs=88.1

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      |.+|+++||||||.||.+++++|+++|.  +|++++|++.....      . ....+....+|+.+.+++...+      
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~-~~~~i~~~~~D~~~~~~~~~~~------   78 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------E-AYKNVNQEVVDFEKLDDYASAF------   78 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------G-GGGGCEEEECCGGGGGGGGGGG------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------c-ccceeeeeeecccccccccccc------
Confidence            4678999999999999999999999995  89999997643211      0 2235666777887765544332      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNG  157 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  157 (167)
                      ...|.+++++|.   .       ..........++|+.++..+++.+..    .+-.++|++|+......
T Consensus        79 ~~~d~vi~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~  134 (232)
T d2bkaa1          79 QGHDVGFCCLGT---T-------RGKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS  134 (232)
T ss_dssp             SSCSEEEECCCC---C-------HHHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT
T ss_pred             cccccccccccc---c-------ccccchhhhhhhcccccceeeecccc----cCccccccCCccccccC
Confidence            468999999986   1       12345566788899999888887643    33458999998776543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.28  E-value=2.1e-11  Score=86.14  Aligned_cols=129  Identities=16%  Similarity=0.139  Sum_probs=88.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCe--EEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYT--VAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+++|||||+|.||++++++|+++|++  |+.+.|+++....        ...++.++.+|+++.++..++++      .
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~------~   68 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK--------IGGEADVFIGDITDADSINPAFQ------G   68 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH--------TTCCTTEEECCTTSHHHHHHHHT------T
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh--------ccCCcEEEEeeeccccccccccc------c
Confidence            578999999999999999999999975  5556787754332        34467888999999998887765      5


Q ss_pred             ccEEEEcCCCCCCCCC------CCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccccCC
Q 031016           90 VEVLVYNAYQPVSWQP------TNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLNGI  158 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  158 (167)
                      +|.+||+++.......      ..........+.....+|+.++..+.......    ..+...+.|+.....+.
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~  139 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPD  139 (252)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTT
T ss_pred             ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----cccccccccccccCCCC
Confidence            7999999986220000      01112223445566678888887776665433    33577777776654443

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.26  E-value=4.1e-11  Score=91.10  Aligned_cols=126  Identities=15%  Similarity=0.127  Sum_probs=90.3

Q ss_pred             EEEEcCCCchhHHHHHHHHH-cCCeEEEEec---------ChhhHHHHHHHHHhh-------cCCcEEEEEeecCCHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAH-EGYTVAILAR---------DLGRLSRFADEIARE-------EKSQVFAIRIDCSDSRSV   77 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~-~g~~v~~~~r---------~~~~~~~~~~~l~~~-------~~~~~~~~~~D~~~~~~~   77 (167)
                      +|||||+|-||..++++|++ .|++|+++++         ..+..++....+...       ....+.++.+|++|++.+
T Consensus         5 VLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l   84 (383)
T d1gy8a_           5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFL   84 (383)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHH
T ss_pred             EEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHh
Confidence            89999999999999999996 6899999864         112233333333221       233578899999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           78 REAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        78 ~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      +++++..   .++|+++|.|+.   ...    ....+.....+++|+.+...+++.+...    +..+++++++...
T Consensus        85 ~~~~~~~---~~~d~ViH~Aa~---~~~----~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~~~~~~~~s~~~  147 (383)
T d1gy8a_          85 NGVFTRH---GPIDAVVHMCAF---LAV----GESVRDPLKYYDNNVVGILRLLQAMLLH----KCDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHS---CCCCEEEECCCC---CCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             hhhhhcc---ceeehhhccccc---ccc----cccccccccccccccccccccchhhhcc----CCccccccccccc
Confidence            8888765   689999999987   221    1223556677889999999998887643    3337777666553

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=1.9e-11  Score=91.52  Aligned_cols=117  Identities=17%  Similarity=0.132  Sum_probs=84.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +|||||+|-||..++++|+++| ++|+++++.........      ...++.++.+|+++.+++.+.+..     .+|++
T Consensus         3 ILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~------~~~~~~~i~~Di~~~~~~~~~~~~-----~~d~V   71 (342)
T d2blla1           3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK-----KCDVV   71 (342)
T ss_dssp             EEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH-----HCSEE
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc------cCCCeEEEECccCChHHHHHHHHh-----CCCcc
Confidence            8999999999999999999999 48998887554322221      245799999999987666543321     48999


Q ss_pred             EEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           94 VYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ||+|+.   ....    ...++....+++|+.++..+++.+...     +-+++++||...
T Consensus        72 ih~a~~---~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~  120 (342)
T d2blla1          72 LPLVAI---ATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEV  120 (342)
T ss_dssp             EECBCC---CCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGG
T ss_pred             cccccc---cccc----ccccCCccccccccccccccccccccc-----cccccccccccc
Confidence            999987   2211    123445678999999999999987532     236677776554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.23  E-value=1.8e-11  Score=92.42  Aligned_cols=123  Identities=13%  Similarity=0.045  Sum_probs=87.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ++-.+|||||+|-||..++++|+++|++|+++++.....      ... ......+..+|+.+.+.+.++++      .+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~-~~~~~~~~~~D~~~~~~~~~~~~------~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTE-DMFCDEFHLVDLRVMENCLKVTE------GV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCG-GGTCSEEEECCTTSHHHHHHHHT------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhh-hcccCcEEEeechhHHHHHHHhh------cC
Confidence            344499999999999999999999999999997643321      000 12234677789988887765544      58


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcccc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASLN  156 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  156 (167)
                      |.+||.|+.   ....   ....+.....+.+|+.++..++..+...    +.-++|++||.....
T Consensus        81 d~Vih~a~~---~~~~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk~~i~~SS~~~~~  136 (363)
T d2c5aa1          81 DHVFNLAAD---MGGM---GFIQSNHSVIMYNNTMISFNMIEAARIN----GIKRFFYASSACIYP  136 (363)
T ss_dssp             SEEEECCCC---CCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEEEGGGSC
T ss_pred             CeEeecccc---cccc---cccccccccccccccchhhHHHHhHHhh----Ccccccccccccccc
Confidence            999999987   2221   1123456677889999999988887644    233899999976543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.21  E-value=8.7e-12  Score=93.68  Aligned_cols=125  Identities=10%  Similarity=-0.013  Sum_probs=84.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.+|||||+|-||..++++|+++|+.|.++.++..........+....+.++.++.+|++|.+.+..++.      ..+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~------~~~   75 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA------KAD   75 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT------TCS
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh------hhh
Confidence            36799999999999999999999998755443321000000001111145689999999999999887765      467


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      .+++.|+.   ....    ...++....+++|+.+...++..+...-     -++|++||...
T Consensus        76 ~v~~~a~~---~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~~~-----~k~i~~ss~~v  126 (346)
T d1oc2a_          76 AIVHYAAE---SHND----NSLNDPSPFIHTNFIGTYTLLEAARKYD-----IRFHHVSTDEV  126 (346)
T ss_dssp             EEEECCSC---CCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGG
T ss_pred             hhhhhhhc---cccc----chhhCcccceeeehHhHHhhhhhhcccc-----ccccccccceE
Confidence            78888876   2111    1223446778999999999988765331     37788777653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=9.4e-11  Score=86.91  Aligned_cols=116  Identities=16%  Similarity=0.162  Sum_probs=77.4

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh-hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL-GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      |.+|||||+|-||+.++++|+++|++|+++++.. ...+.+....   ...++.....|+.+.           ...++|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~-----------~~~~~d   67 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI---GHENFELINHDVVEP-----------LYIEVD   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT---TCTTEEEEECCTTSC-----------CCCCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc---CCCceEEEehHHHHH-----------HHcCCC
Confidence            7799999999999999999999999999987632 1111111111   223455555554322           123689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      ++||+|+.   .....    ..++....+++|+.++..+++++..    .+ -++|++||.+.
T Consensus        68 ~VihlAa~---~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~v  118 (312)
T d2b69a1          68 QIYHLASP---ASPPN----YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEV  118 (312)
T ss_dssp             EEEECCSC---CSHHH----HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGG
T ss_pred             EEEECccc---CCchh----HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChhe
Confidence            99999987   22111    1134466789999999999987643    22 38999998654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.06  E-value=4.5e-10  Score=81.28  Aligned_cols=100  Identities=17%  Similarity=0.184  Sum_probs=74.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      +|||||+|.||..++++|.++|++|+.++|+.                      +|++|.++++++++..    ++|++|
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~----~~d~vi   57 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEK----KPNVVI   57 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHH----CCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHc----CCCEEE
Confidence            89999999999999999999999999998852                      4899999999888865    689999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCC
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCS  152 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  152 (167)
                      |+++.   ...    +......+..+..|+.....+...+...     ...+++.||.
T Consensus        58 h~a~~---~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~  103 (281)
T d1vl0a_          58 NCAAH---TAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTD  103 (281)
T ss_dssp             ECCCC---CCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEG
T ss_pred             eeccc---ccc----ccccccchhhcccccccccccccccccc-----cccccccccc
Confidence            99986   211    1223344566777887777766655432     1255555554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.03  E-value=2.9e-10  Score=84.36  Aligned_cols=121  Identities=13%  Similarity=0.160  Sum_probs=84.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeE------EEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTV------AILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v------~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ++||||+|-||..++++|+++|+.|      +.+++..  ...... ..+.  ...++.++..|.++........     
T Consensus         3 IlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~-~~~~--~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh-hhhh--cCCCeEEEEeccccchhhhccc-----
Confidence            8999999999999999999998754      4443321  111111 1111  3457899999999998666432     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                       ..+|.+++.|+.       +......+.....+++|+.++..+++.+...    +..++|++||....
T Consensus        75 -~~~d~vi~~a~~-------~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~~~~I~~Ss~~~y  131 (322)
T d1r6da_          75 -RGVDAIVHFAAE-------SHVDRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVY  131 (322)
T ss_dssp             -TTCCEEEECCSC-------CCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGG
T ss_pred             -cccceEEeeccc-------ccccccccchHHHhhhhHHHHHHHHHHHHHc----CCceEEEeecceee
Confidence             368999999976       1122334555667899999999999988643    33489999987654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.00  E-value=4.3e-10  Score=81.79  Aligned_cols=105  Identities=13%  Similarity=0.090  Sum_probs=77.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      +|||||+|-||.++++.|.++|. ++.+++....                  +..|++|.+.++++++..    ++|++|
T Consensus         3 ILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~----~~D~Vi   59 (298)
T d1n2sa_           3 ILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------------------FCGDFSNPKGVAETVRKL----RPDVIV   59 (298)
T ss_dssp             EEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------------SCCCTTCHHHHHHHHHHH----CCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------------ccCcCCCHHHHHHHHHHc----CCCEEE
Confidence            89999999999999999999886 4444443221                  236999999999988875    689999


Q ss_pred             EcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCcc
Q 031016           95 YNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSAS  154 (167)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  154 (167)
                      |+||.   .....    +.+.-...+++|+.++..+.+++..     ...+++++||...
T Consensus        60 h~Aa~---~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~  107 (298)
T d1n2sa_          60 NAAAH---TAVDK----AESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYV  107 (298)
T ss_dssp             ECCCC---CCHHH----HTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGG
T ss_pred             Eeccc---ccccc----cccCccccccccccccccchhhhhc-----ccccccccccccc
Confidence            99997   32211    1234466788999999888887642     2347888877654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.96  E-value=4.9e-09  Score=76.46  Aligned_cols=81  Identities=16%  Similarity=0.098  Sum_probs=60.4

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH-HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS-RFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +.+|||||+|.||+.++++|+++|++|+++.|+..... ...+.+.......+.++.+|+++.+.+.+.+.      ..+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~------~~~   77 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------QVD   77 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT------TCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc------Ccc
Confidence            34999999999999999999999999999998653211 11112222134568899999999988877665      467


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      .++++++.
T Consensus        78 ~~~~~~~~   85 (312)
T d1qyda_          78 VVISALAG   85 (312)
T ss_dssp             EEEECCCC
T ss_pred             hhhhhhhh
Confidence            88888865

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.93  E-value=8e-09  Score=74.77  Aligned_cols=82  Identities=21%  Similarity=0.206  Sum_probs=62.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH--HHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL--SRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .|.+|||||+|.||++++++|+++|++|++++|+....  .+....+.......+.++.+|+++.....+.+.      .
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~   76 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------N   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------h
Confidence            46799999999999999999999999999999865431  111222222244567888999999988877666      4


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      .+.++++++.
T Consensus        77 ~~~vi~~~~~   86 (307)
T d1qyca_          77 VDVVISTVGS   86 (307)
T ss_dssp             CSEEEECCCG
T ss_pred             ceeeeecccc
Confidence            6888888875

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.92  E-value=1.7e-08  Score=75.34  Aligned_cols=78  Identities=19%  Similarity=0.158  Sum_probs=57.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHH-HHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSV-REAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~~   89 (167)
                      +.|+++||||+|.||.+++++|+++|++|+++.|+++....  +.+.  ....+.++.+|++|..+. +.++      ..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~--~~~~v~~~~gD~~d~~~~~~~a~------~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ--AIPNVTLFQGPLLNNVPLMDTLF------EG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH--TSTTEEEEESCCTTCHHHHHHHH------TT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc--ccCCCEEEEeeCCCcHHHHHHHh------cC
Confidence            46899999999999999999999999999999998765432  1221  234688999999986543 3332      34


Q ss_pred             ccEEEEcCC
Q 031016           90 VEVLVYNAY   98 (167)
Q Consensus        90 i~~lv~~ag   98 (167)
                      .+.++.+..
T Consensus        72 ~~~~~~~~~   80 (350)
T d1xgka_          72 AHLAFINTT   80 (350)
T ss_dssp             CSEEEECCC
T ss_pred             CceEEeecc
Confidence            676665553

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.89  E-value=1.3e-09  Score=76.17  Aligned_cols=112  Identities=12%  Similarity=0.009  Sum_probs=74.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .|.++||||+|.||++++++|+++|+  +|+...|++..           ...++   ..+..|..++   ...  ..+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----------~~~~~---~~~~~d~~~~---~~~--~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRL---DNPVGPLAEL---LPQ--LDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTE---ECCBSCHHHH---GGG--CCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----------hcccc---cccccchhhh---hhc--cccc
Confidence            48899999999999999999999997  56666665421           11122   3344444332   121  2357


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      +|.+|+++|.   ....      ...-+...+.|+.++..+++.+-    +.+-.+++++|+..+.
T Consensus        63 ~d~vi~~~g~---~~~~------~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~~i~~Ss~~~~  115 (212)
T d2a35a1          63 IDTAFCCLGT---TIKE------AGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGAD  115 (212)
T ss_dssp             CSEEEECCCC---CHHH------HSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCC
T ss_pred             hheeeeeeee---eccc------cccccccccchhhhhhhcccccc----cccccccccccccccc
Confidence            8999999987   2111      12234567889999888888754    3344589999986653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.51  E-value=7.2e-08  Score=65.59  Aligned_cols=45  Identities=27%  Similarity=0.331  Sum_probs=40.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE   59 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~   59 (167)
                      +.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++...
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            567788899999999999999999999999999999998888753

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.33  E-value=7.6e-07  Score=64.28  Aligned_cols=116  Identities=11%  Similarity=0.064  Sum_probs=65.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +|||||+|-||..++++|+++|+ .|+++++-.  .+.....    .   .    ..+|..+.+..............++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~----~---~----~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----D---L----NIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----T---S----CCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc----c---c----chhhhccchHHHHHHhhhhcccchh
Confidence            79999999999999999999997 687775321  1111111    1   1    1223333333322222111346788


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEecCCccc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTGCSASL  155 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  155 (167)
                      .+++.|+.   ....   ..   ..+...+.|+.+...+.+.+...    + -++++.||....
T Consensus        71 ~i~~~aa~---~~~~---~~---~~~~~~~~~~~~~~~~l~~~~~~----~-i~~v~~ss~~~~  120 (307)
T d1eq2a_          71 AIFHEGAC---SSTT---EW---DGKYMMDNNYQYSKELLHYCLER----E-IPFLYASSAATY  120 (307)
T ss_dssp             EEEECCSC---CCTT---CC---CHHHHHHHTHHHHHHHHHHHHHH----T-CCEEEEEEGGGG
T ss_pred             hhhhhccc---cccc---cc---ccccccccccccccccccccccc----c-cccccccccccc
Confidence            89998875   2111   11   23445677788777777665432    2 245555554443

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.28  E-value=2.1e-06  Score=58.25  Aligned_cols=80  Identities=11%  Similarity=0.035  Sum_probs=57.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|+||+|++|...++.....|++|+.+.+++++.+.+.    . .+.+..+   |-.+++..+.+.+.. ....+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~-~Ga~~vi---~~~~~~~~~~~~~~~-~~~Gv   99 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----Q-IGFDAAF---NYKTVNSLEEALKKA-SPDGY   99 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-TTCSEEE---ETTSCSCHHHHHHHH-CTTCE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----h-hhhhhhc---ccccccHHHHHHHHh-hcCCC
Confidence            5899999999999999999999999999999999877654433    2 4444332   444444444433332 23469


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus       100 d~v~D~vG~  108 (182)
T d1v3va2         100 DCYFDNVGG  108 (182)
T ss_dssp             EEEEESSCH
T ss_pred             ceeEEecCc
Confidence            999999975

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=6.5e-06  Score=55.79  Aligned_cols=84  Identities=15%  Similarity=0.170  Sum_probs=61.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ...+|+++|.|+ ||.+++++..|.+.|. ++++..|+.+..+++...++.. ..........|+.+.+++...+.    
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA----   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc----
Confidence            457899999999 6999999999999998 6888899877666554433321 11223455679988887765554    


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                        ..|++||+...
T Consensus        90 --~~diiIN~Tp~  100 (182)
T d1vi2a1          90 --SADILTNGTKV  100 (182)
T ss_dssp             --TCSEEEECSST
T ss_pred             --ccceeccccCC
Confidence              57999999754

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=5.4e-06  Score=55.64  Aligned_cols=80  Identities=6%  Similarity=0.003  Sum_probs=57.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|+|++|++|...++.....|++|+++++++++.+.+.    + .+.+-.   +|.++++..+++.+.. ....+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~-~Ga~~v---i~~~~~~~~~~i~~~t-~~~g~   98 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----Q-NGAHEV---FNHREVNYIDKIKKYV-GEKGI   98 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-TTCSEE---EETTSTTHHHHHHHHH-CTTCE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc----c-cCcccc---cccccccHHHHhhhhh-ccCCc
Confidence            5789999999999999999988889999999998876654332    2 444322   3666665444443332 23468


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus        99 d~v~d~~g~  107 (174)
T d1yb5a2          99 DIIIEMLAN  107 (174)
T ss_dssp             EEEEESCHH
T ss_pred             eEEeecccH
Confidence            999988864

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.22  E-value=7.1e-06  Score=54.74  Aligned_cols=74  Identities=12%  Similarity=0.224  Sum_probs=53.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +|.++|.|| |.+|+.+|+.|+++|++|++++|+.++.+++.+.+     ........+..+....+..+.      ..|
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~-----~~~~~~~~~~~~~~~~~~~i~------~~~   69 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-----QHSTPISLDVNDDAALDAEVA------KHD   69 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC-----TTEEEEECCTTCHHHHHHHHT------TSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc-----cccccccccccchhhhHhhhh------ccc
Confidence            688999988 99999999999999999999999999887765432     234444456666555555443      345


Q ss_pred             EEEEcC
Q 031016           92 VLVYNA   97 (167)
Q Consensus        92 ~lv~~a   97 (167)
                      .++...
T Consensus        70 ~~i~~~   75 (182)
T d1e5qa1          70 LVISLI   75 (182)
T ss_dssp             EEEECS
T ss_pred             eeEeec
Confidence            555444

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.19  E-value=4.8e-05  Score=50.51  Aligned_cols=81  Identities=15%  Similarity=0.089  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-h-cC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-S-LG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~-~~   88 (167)
                      .+.+++|+| +|++|...++.+...|++|+++++++++++...+     .+.+..+. .|-.+ ++.....+.+. . ..
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-----~ga~~~~~-~~~~~-~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-----CGADVTLV-VDPAK-EEESSIIERIRSAIGD   97 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----TTCSEEEE-CCTTT-SCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-----cCCcEEEe-ccccc-cccchhhhhhhccccc
Confidence            477899997 5899999999888899999999999887655443     44443332 23222 22233334443 2 24


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++|.++|.
T Consensus        98 g~D~vid~~g~  108 (170)
T d1e3ja2          98 LPNVTIDCSGN  108 (170)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCceeeecCCC
Confidence            68999999986

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.14  E-value=5.9e-06  Score=56.27  Aligned_cols=86  Identities=9%  Similarity=-0.011  Sum_probs=58.4

Q ss_pred             CcEEEE-EcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH--hcC
Q 031016           12 RGIAAI-VGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL--SLG   88 (167)
Q Consensus        12 ~~~~lI-tGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~   88 (167)
                      +.+++| +||+|++|...++..-..|++|+.+.|+.+..++..+.++. .+.+..+..-+.... ++...+.++.  ..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~-lGad~vi~~~~~~~~-~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-LGATQVITEDQNNSR-EFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-HTCSEEEEHHHHHCG-GGHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhh-ccccEEEeccccchh-HHHHHHHHHHhhccC
Confidence            455555 68999999999998888899999998888777777777766 665543332111222 2333333333  346


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|+++.+.|.
T Consensus       107 ~vdvv~D~vg~  117 (189)
T d1gu7a2         107 EAKLALNCVGG  117 (189)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999999875

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.10  E-value=3e-05  Score=51.31  Aligned_cols=73  Identities=16%  Similarity=0.289  Sum_probs=55.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.++.++|.|+ |++|..+++.|..+|+ ++.+..|+.++.+++.+.+    +.+.       .+.+++.+.+.     
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~----~~~~-------~~~~~~~~~l~-----   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----GGEA-------VRFDELVDHLA-----   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----TCEE-------CCGGGHHHHHH-----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh----hccc-------ccchhHHHHhc-----
Confidence            357899999998 9999999999999998 6889999988887777654    3221       12234444444     


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                       ..|++|++.+.
T Consensus        84 -~~Divi~atss   94 (159)
T d1gpja2          84 -RSDVVVSATAA   94 (159)
T ss_dssp             -TCSEEEECCSS
T ss_pred             -cCCEEEEecCC
Confidence             57999999876

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.08  E-value=3.1e-06  Score=57.23  Aligned_cols=78  Identities=15%  Similarity=0.095  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.++||+||+||+|...++.....|++|+.+++++++.+...+     .+.+..+   |-.+  ...+.+... ..+++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-----lGa~~vi---~~~~--~~~~~~~~~-~~~gv   99 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-----LGAKEVL---ARED--VMAERIRPL-DKQRW   99 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-----TTCSEEE---ECC-----------C-CSCCE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-----cccceee---ecch--hHHHHHHHh-hccCc
Confidence            47889999999999999999988999999999998887654432     4555433   2221  122222211 33589


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus       100 D~vid~vgg  108 (176)
T d1xa0a2         100 AAAVDPVGG  108 (176)
T ss_dssp             EEEEECSTT
T ss_pred             CEEEEcCCc
Confidence            999999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.06  E-value=9.1e-06  Score=54.76  Aligned_cols=80  Identities=13%  Similarity=-0.017  Sum_probs=56.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.+...|++|+++++++++.+.    +++ .+.+..   .|-.+++-.+++.+ .....++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~-~Ga~~v---i~~~~~~~~~~v~~-~t~~~g~   95 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSR-LGVEYV---GDSRSVDFADEILE-LTDGYGV   95 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHT-TCCSEE---EETTCSTHHHHHHH-HTTTCCE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----ccc-cccccc---ccCCccCHHHHHHH-HhCCCCE
Confidence            47899999999999999999998999999999988766533    333 454422   35555544444332 2222469


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus        96 d~v~d~~g~  104 (183)
T d1pqwa_          96 DVVLNSLAG  104 (183)
T ss_dssp             EEEEECCCT
T ss_pred             EEEEecccc
Confidence            999999975

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=1.2e-05  Score=53.92  Aligned_cols=80  Identities=9%  Similarity=-0.079  Sum_probs=58.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+||+|++|...++.....|++|+++++++++.+.+.+     .+.+.   .+|-++++-.+++.+ +.....+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-----lGa~~---vi~~~~~d~~~~v~~-~t~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-----AGAWQ---VINYREEDLVERLKE-ITGGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-----HTCSE---EEETTTSCHHHHHHH-HTTTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-----cCCeE---EEECCCCCHHHHHHH-HhCCCCe
Confidence            47899999999999999999988999999999999887655432     34432   237677654554433 2233468


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus        99 d~v~d~~g~  107 (179)
T d1qora2          99 RVVYDSVGR  107 (179)
T ss_dssp             EEEEECSCG
T ss_pred             EEEEeCccH
Confidence            999998875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.95  E-value=5.4e-05  Score=50.91  Aligned_cols=80  Identities=15%  Similarity=0.089  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH--HHHHHHHHHHHhc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS--RSVREAFEGVLSL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~   87 (167)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++++... +    .+.+.. +  |..+.  .+..+.+.+....
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~----lGa~~v-i--~~~~~~~~~~~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E----IGADLT-L--NRRETSVEERRKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H----TTCSEE-E--ETTTSCHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccc-c----ccceEE-E--eccccchHHHHHHHHHhhCC
Confidence            4889999997 8999999999999998 7999999988775443 2    444332 2  44432  2333333333222


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      ..+|++|.++|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            359999999986

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.94  E-value=5.9e-05  Score=50.44  Aligned_cols=75  Identities=9%  Similarity=0.166  Sum_probs=57.4

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+++.+.++. .. ++.....|-.             ...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~-~~-~~~~~~~~~~-------------~~~   78 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP-YG-NIQAVSMDSI-------------PLQ   78 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-GS-CEEEEEGGGC-------------CCS
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhh-cc-ccchhhhccc-------------ccc
Confidence            457899999988 7889999999998778999999999999999888765 22 3333332211             235


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++||+...
T Consensus        79 ~~diiIN~tp~   89 (171)
T d1p77a1          79 TYDLVINATSA   89 (171)
T ss_dssp             CCSEEEECCCC
T ss_pred             ccceeeecccc
Confidence            78999999865

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.94  E-value=1.5e-05  Score=51.01  Aligned_cols=71  Identities=15%  Similarity=0.330  Sum_probs=54.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLV   94 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv   94 (167)
                      ++|.|+ |.+|+.+++.|.++|++|++++.+++..+++.+.    .  ...++..|.++++.++++-     ....+.++
T Consensus         3 IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~----~--~~~vi~Gd~~~~~~l~~~~-----i~~a~~vv   70 (132)
T d1lssa_           3 IIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----I--DALVINGDCTKIKTLEDAG-----IEDADMYI   70 (132)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----C--SSEEEESCTTSHHHHHHTT-----TTTCSEEE
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh----h--hhhhccCcccchhhhhhcC-----hhhhhhhc
Confidence            788887 8999999999999999999999998877765442    2  3567889999998665431     13567666


Q ss_pred             EcC
Q 031016           95 YNA   97 (167)
Q Consensus        95 ~~a   97 (167)
                      ...
T Consensus        71 ~~t   73 (132)
T d1lssa_          71 AVT   73 (132)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            644

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.94  E-value=1.5e-05  Score=53.35  Aligned_cols=75  Identities=12%  Similarity=0.026  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+++++|+|++|++|...++.....|++|+.+++++++.+...+     .+.+..+   |..+.  .    .+......+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-----lGa~~~i---~~~~~--~----~~~~~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-----LGAEEAA---TYAEV--P----ERAKAWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-----TTCSEEE---EGGGH--H----HHHHHTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-----cccceee---ehhhh--h----hhhhccccc
Confidence            58899999999999999999888899999999988776654432     4444322   43321  1    222223569


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus        93 D~v~d~~G~  101 (171)
T d1iz0a2          93 DLVLEVRGK  101 (171)
T ss_dssp             EEEEECSCT
T ss_pred             cccccccch
Confidence            999987653

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=4.4e-05  Score=50.95  Aligned_cols=75  Identities=12%  Similarity=0.131  Sum_probs=55.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..++|.++|.|+ ||.+++++..|.+.|.+|.+..|+.++.+++.+.+.. .. .+..+  +..+   .        ...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~-~~-~~~~~--~~~~---~--------~~~   78 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH-TG-SIQAL--SMDE---L--------EGH   78 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG-GS-SEEEC--CSGG---G--------TTC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh-cc-ccccc--cccc---c--------ccc
Confidence            357899999998 7999999999999999999999999999888877655 22 22222  2211   1        124


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ..|++||+...
T Consensus        79 ~~dliIN~Tp~   89 (170)
T d1nyta1          79 EFDLIINATSS   89 (170)
T ss_dssp             CCSEEEECCSC
T ss_pred             ccceeeccccc
Confidence            68999998744

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=1.8e-05  Score=45.94  Aligned_cols=42  Identities=14%  Similarity=0.235  Sum_probs=36.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      ++.+++|+|++||+|....+.+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            578899999999999999998888899999999988776544

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.72  E-value=0.00014  Score=48.16  Aligned_cols=80  Identities=13%  Similarity=0.011  Sum_probs=56.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|+|++|++|...++.+...|+ +|+++++++++.+...+     .+.+..   .|.++++..++..+.. ..+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-----~Ga~~~---i~~~~~~~~~~~~~~~-~~~~   97 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-----AGADYV---INASMQDPLAEIRRIT-ESKG   97 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-----HTCSEE---EETTTSCHHHHHHHHT-TTSC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-----cCCcee---eccCCcCHHHHHHHHh-hccc
Confidence            478899999999999999999998886 78888888776554432     444422   3555555455444332 2246


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.++|.
T Consensus        98 ~d~vid~~g~  107 (170)
T d1jvba2          98 VDAVIDLNNS  107 (170)
T ss_dssp             EEEEEESCCC
T ss_pred             chhhhccccc
Confidence            9999999986

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.68  E-value=4.2e-05  Score=48.78  Aligned_cols=73  Identities=14%  Similarity=0.204  Sum_probs=53.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |.++|.|. |.+|+.+++.|.++|++|++++.+++..+++.+     .+  ...+..|.++++.++++-     ....|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-----~~--~~~~~gd~~~~~~l~~a~-----i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----YA--THAVIANATEENELLSLG-----IRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-----TC--SEEEECCTTCTTHHHHHT-----GGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-----hC--CcceeeecccchhhhccC-----CccccE
Confidence            56788877 799999999999999999999999887765532     23  245568999988765431     124677


Q ss_pred             EEEcCC
Q 031016           93 LVYNAY   98 (167)
Q Consensus        93 lv~~ag   98 (167)
                      +|...+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            766654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=0.00032  Score=46.45  Aligned_cols=81  Identities=15%  Similarity=0.093  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++++...+     .+.+.. +..+-.+..+..+.+..- ....
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-----~Ga~~~-~~~~~~~~~~~~~~~~~~-~g~g   97 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-----IGADLV-LQISKESPQEIARKVEGQ-LGCK   97 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-----TTCSEE-EECSSCCHHHHHHHHHHH-HTSC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-----hCCccc-cccccccccccccccccc-CCCC
Confidence            4678999987 9999999999999999 79999999887664432     454432 222333444444333322 2247


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus        98 ~Dvvid~~G~  107 (171)
T d1pl8a2          98 PEVTIECTGA  107 (171)
T ss_dssp             CSEEEECSCC
T ss_pred             ceEEEeccCC
Confidence            8999999986

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.64  E-value=0.00068  Score=44.30  Aligned_cols=119  Identities=14%  Similarity=0.041  Sum_probs=68.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +.+.+.|.|+ |.+|..++..+..++. ++++++.+++.++.....+...   .+......  .-++.+   ..+.    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~--~~~~~~---~~~~----   75 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR--AEYSYE---AALT----   75 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE--EECSHH---HHHT----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe--ccCchh---hhhc----
Confidence            4566788897 9999999999888885 8999998887766555555431   12121111  112221   1122    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCC---CCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFT---EISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                        .-|++|.++|.    +..+-.   ..+.   .+.+..|..-    .+.+.+.+.+.. .+.++++|..
T Consensus        76 --~adiVvitag~----~~~~g~~~~~~tR---~~l~~~n~~i----v~~i~~~i~~~~p~aiviivsNP  132 (154)
T d1pzga1          76 --GADCVIVTAGL----TKVPGKPDSEWSR---NDLLPFNSKI----IREIGQNIKKYCPKTFIIVVTNP  132 (154)
T ss_dssp             --TCSEEEECCSC----SSCTTCCGGGCCG---GGGHHHHHHH----HHHHHHHHHHHCTTCEEEECCSS
T ss_pred             --CCCeEEEeccc----ccCCCCCCcccch---hhhhhhhHHH----HHHHHHHHHhcCCCcEEEEeCCc
Confidence              46999999997    222221   1232   2335555554    445555555443 4667766653

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.63  E-value=0.0012  Score=42.58  Aligned_cols=113  Identities=13%  Similarity=0.164  Sum_probs=66.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChh--hHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLG--RLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~--~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +.|+||+|.+|..++..++.+|.  ++++++++++  +++.....+...   ..........--.+.+.+          
T Consensus         3 V~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l----------   72 (145)
T d1hyea1           3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII----------   72 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG----------
T ss_pred             EEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh----------
Confidence            78999999999999999999984  8999988753  333333334321   222222221111122111          


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcCCceEEEec
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERGKGTIIFTG  150 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is  150 (167)
                      ..-|++|.+||.    +..+-  .+.   .+.++.|..    +.+.+.+.+.+.....|+.+|
T Consensus        73 ~~aDvVVitAG~----~~~~g--~sR---~dl~~~Na~----iv~~i~~~i~~~~~~~iivVt  122 (145)
T d1hyea1          73 DESDVVIITSGV----PRKEG--MSR---MDLAKTNAK----IVGKYAKKIAEICDTKIFVIT  122 (145)
T ss_dssp             TTCSEEEECCSC----CCCTT--CCH---HHHHHHHHH----HHHHHHHHHHHHCCCEEEECS
T ss_pred             ccceEEEEeccc----ccCCC--CCh---hhhhhhhHH----HHHHHHHHHhccCCCeEEEEc
Confidence            357999999997    22222  233   345667766    445555555555444566564

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.62  E-value=0.00021  Score=46.39  Aligned_cols=114  Identities=14%  Similarity=0.086  Sum_probs=66.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      ++.+.|.|+ |.+|..++..|+.+|  .+|++++++++..+.....+..-  ..........|   .++       +   
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~-------~---   70 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSD-------C---   70 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGG-------G---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHH-------h---
Confidence            345777896 899999999999987  47999999987766554455421  22223333333   221       1   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      ..-|++|.++|.    +..+     .++-.+.+..|..    +.+...+.+.+.. .+.++++|-.
T Consensus        71 ~~adivvitag~----~~~~-----g~~r~~l~~~N~~----i~~~~~~~i~~~~p~aivivvtNP  123 (146)
T d1ez4a1          71 KDADLVVITAGA----PQKP-----GESRLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANP  123 (146)
T ss_dssp             TTCSEEEECCCC-------------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             ccccEEEEeccc----ccCC-----CCCHHHHHHHHHH----HHHHHHHHHhhcCCCcEEEEeCCc
Confidence            356999999987    2222     1233445566765    4455555555544 4666666643

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.61  E-value=0.00015  Score=48.54  Aligned_cols=80  Identities=9%  Similarity=0.001  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ ||+|...++.+...|+ +|++++.++++++...+     .+.+..+   |..+.+...+.+.+......
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-----~GA~~~i---n~~~~~~~~~~~~~~~~g~G   99 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-----VGATECI---SPKDSTKPISEVLSEMTGNN   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----HTCSEEE---CGGGCSSCHHHHHHHHHTSC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-----cCCcEEE---CccccchHHHHHHHHhcccc
Confidence            5889999987 8999999999999996 89999999998775443     4554433   32322221222222222347


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|.+|.+.|.
T Consensus       100 ~d~vi~~~g~  109 (176)
T d1d1ta2         100 VGYTFEVIGH  109 (176)
T ss_dssp             CCEEEECSCC
T ss_pred             ceEEEEeCCc
Confidence            9999999986

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.58  E-value=0.00014  Score=48.19  Aligned_cols=75  Identities=12%  Similarity=0.058  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|.|+ |++|...++.+...|++|+++++++++++...+     .+.+..+   |..++.+.   .+.  ..+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-----lGa~~~i---~~~~~~~~---~~~--~~~~~   92 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-----MGADHYI---ATLEEGDW---GEK--YFDTF   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-----HTCSEEE---EGGGTSCH---HHH--SCSCE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-----cCCcEEe---eccchHHH---HHh--hhccc
Confidence            4788999987 899999998887889999999999887765433     4544322   32222211   122  23578


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++.+.+.
T Consensus        93 d~vi~~~~~  101 (168)
T d1piwa2          93 DLIVVCASS  101 (168)
T ss_dssp             EEEEECCSC
T ss_pred             ceEEEEecC
Confidence            999998876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.57  E-value=0.00013  Score=49.21  Aligned_cols=79  Identities=10%  Similarity=0.051  Sum_probs=53.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEE-EecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAI-LARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ++++||+||+|++|...++..-..|+++++ +++++++..++.+.    .+.+.   ..|..+++..+ .+.+.. ...+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~----~gad~---vi~~~~~~~~~-~~~~~~-~~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSE----LGFDA---AVNYKTGNVAE-QLREAC-PGGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHH----SCCSE---EEETTSSCHHH-HHHHHC-TTCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhc----ccceE---EeeccchhHHH-HHHHHh-ccCc
Confidence            589999999999999999988889996544 56666665555444    34332   23555554333 333332 2459


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |+++.+.|.
T Consensus       102 Dvv~D~vGg  110 (187)
T d1vj1a2         102 DVYFDNVGG  110 (187)
T ss_dssp             EEEEESSCH
T ss_pred             eEEEecCCc
Confidence            999999975

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.57  E-value=0.00049  Score=45.21  Aligned_cols=77  Identities=17%  Similarity=0.158  Sum_probs=51.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|.|+ |++|...++.+...|++|+++++++++++...+     .+.+..   .|.++++..+++.+..   +..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-----~Ga~~~---i~~~~~~~~~~~~~~~---~g~   94 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-----LGASLT---VNARQEDPVEAIQRDI---GGA   94 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----TTCSEE---EETTTSCHHHHHHHHH---SSE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc-----cCcccc---ccccchhHHHHHHHhh---cCC
Confidence            4788999886 899999998888889999999999887654432     454422   3555555444443322   345


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      +..|-+++.
T Consensus        95 ~~~i~~~~~  103 (166)
T d1llua2          95 HGVLVTAVS  103 (166)
T ss_dssp             EEEEECCSC
T ss_pred             ccccccccc
Confidence            555555543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.56  E-value=0.00037  Score=45.10  Aligned_cols=116  Identities=7%  Similarity=0.061  Sum_probs=68.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.|+||+|.+|..++..|+.+|.  ++++++.++.+.+  ...+..  .........-+ ...+..+.++      .-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~--~~~~~~~~~~~-~~~~~~~~~~------~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSH--IETRATVKGYL-GPEQLPDCLK------GCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTT--SSSSCEEEEEE-SGGGHHHHHT------TCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhh--hhhhcCCCeEE-cCCChHHHhC------CCC
Confidence            478999999999999999999885  6888888764332  223332  11121122222 2333333233      469


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           92 VLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      ++|.++|.    +..+-  .+.   .+.++.|..-.    +.+.+.+.+.. .+.++++|..+
T Consensus        71 ivVitag~----~~~~g--~sR---~~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtNPv  120 (144)
T d1mlda1          71 VVVIPAGV----PRKPG--MTR---DDLFNTNATIV----ATLTAACAQHCPDAMICIISNPV  120 (144)
T ss_dssp             EEEECCSC----CCCTT--CCG---GGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSCH
T ss_pred             EEEECCCc----CCCCC--CCc---chHHHHHHHHH----HHHHHHHHhcCCCeEEEEecCch
Confidence            99999997    33332  232   33466777654    45555555543 56777776543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.52  E-value=0.00036  Score=45.25  Aligned_cols=117  Identities=12%  Similarity=0.165  Sum_probs=68.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      |.+.|+|+ |.+|..++..++.+|.  ++++++.++++++.....+...   .........   .+.+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHHh----------
Confidence            55678896 8999999999999874  7999999888766544445431   222333332   233222          


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      -.-|++|.++|.   ....  .+...++-.+.++.|..    +++.+.+.+.+.. .+.++++|-.
T Consensus        68 ~~adiVVitaG~---~~~~--~~~~g~~R~~l~~~N~~----i~~~i~~~i~~~~p~aivivvtNP  124 (146)
T d1hyha1          68 ADADVVISTLGN---IKLQ--QDNPTGDRFAELKFTSS----MVQSVGTNLKESGFHGVLVVISNP  124 (146)
T ss_dssp             TTCSEEEECCSC---GGGT--C-------CTTHHHHHH----HHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             ccccEEEEeccc---cccc--cccCCccHHHHHHHHHH----HHHHHHHHHhhcCCCeEEEEecCc
Confidence            246999999997   2111  11111222334555654    5567777776654 4677766643

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=0.00076  Score=43.98  Aligned_cols=115  Identities=10%  Similarity=0.114  Sum_probs=65.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC----e---EEEE--ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY----T---VAIL--ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~----~---v~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+.|+||+|.+|..++..|+.++.    .   ..+.  .++.+.++.....+..........+...-.+.+.    +   
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---   78 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA----F---   78 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH----T---
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh----c---
Confidence            599999999999999999998652    1   1222  3444445544444443122234444333222211    2   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-C-CceEEEecC
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-G-KGTIIFTGC  151 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~-~g~iv~iss  151 (167)
                         ..-|++|.++|.    +..  ...+.+++   +..|+.    +.+...+.+.+. + .+.|+.+|.
T Consensus        79 ---~~advViitaG~----~~~--pg~~r~dl---~~~N~~----i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          79 ---KDADYALLVGAA----PRK--AGMERRDL---LQVNGK----IFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             ---TTCSEEEECCCC----CCC--TTCCHHHH---HHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---ccccEEEeecCc----CCC--CCCcHHHH---HHHHHH----HHHHHHHHHHHhCCCCcEEEEecC
Confidence               357999999997    222  23344444   555655    455666666553 2 356666664

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.51  E-value=9.3e-05  Score=45.90  Aligned_cols=46  Identities=17%  Similarity=0.103  Sum_probs=37.5

Q ss_pred             CCCCCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016            1 MRNMTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus         1 ~~~~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      |++..-...+++|.++|+|+ |.+|...++.|++.|++|++++....
T Consensus         1 M~~~Pi~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           1 MDHLPIFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCCEEEEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             CCccceEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            45544445678999999999 68999999999999999988876543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00039  Score=45.91  Aligned_cols=74  Identities=9%  Similarity=0.106  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.+++|.|+ |++|...++.+...|++++++++++++.+.. ++    .+.+..   +|..+++....      ....+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~----lGad~~---i~~~~~~~~~~------~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KA----LGADEV---VNSRNADEMAA------HLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HH----HTCSEE---EETTCHHHHHT------TTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hc----cCCcEE---EECchhhHHHH------hcCCC
Confidence            4789999986 8999999988888999999999888776433 33    344422   35555543221      23579


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++.+.|.
T Consensus        95 D~vid~~g~  103 (168)
T d1uufa2          95 DFILNTVAA  103 (168)
T ss_dssp             EEEEECCSS
T ss_pred             ceeeeeeec
Confidence            999999986

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.45  E-value=7.8e-05  Score=49.65  Aligned_cols=75  Identities=12%  Similarity=0.111  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH-H--hc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV-L--SL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~--~~   87 (167)
                      .+.++||+||+||+|...++..-..|++|+.+++++++.+.+.+     .+.+...   |   .++   ...+. .  .-
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-----lGad~vi---~---~~~---~~~~~~~~~~~   88 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-----LGASEVI---S---RED---VYDGTLKALSK   88 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-----HTCSEEE---E---HHH---HCSSCCCSSCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-----hcccceE---e---ccc---hhchhhhcccC
Confidence            35679999999999999998888899999999998887665543     4554332   2   111   11111 1  12


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      +++|+++.+.|.
T Consensus        89 ~gvd~vid~vgg  100 (167)
T d1tt7a2          89 QQWQGAVDPVGG  100 (167)
T ss_dssp             CCEEEEEESCCT
T ss_pred             CCceEEEecCcH
Confidence            479999999986

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.42  E-value=0.00075  Score=43.76  Aligned_cols=115  Identities=9%  Similarity=0.053  Sum_probs=70.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      ++.+.|+|+ |.+|..++..++.+|.  ++++++++++.++.....+.+-   ..........|   .++          
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~----------   71 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDD----------   71 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGG----------
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHH----------
Confidence            566888897 8999999999999875  7999999888766555555431   12233333322   221          


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCCc
Q 031016           87 LGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCSA  153 (167)
Q Consensus        87 ~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~  153 (167)
                      ...-|++|.++|.    +..+-.  +   -.+.+..|..    +.+.+.+.+.+. +.+.++++|-.+
T Consensus        72 l~daDvvvitag~----~~~~~~--~---R~dl~~~N~~----i~~~i~~~i~~~~p~a~~ivvtNPv  126 (148)
T d1ldna1          72 CRDADLVVICAGA----NQKPGE--T---RLDLVDKNIA----IFRSIVESVMASGFQGLFLVATNPV  126 (148)
T ss_dssp             TTTCSEEEECCSC----CCCTTT--C---SGGGHHHHHH----HHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             hccceeEEEeccc----ccccCc--c---hhHHHHHHHH----HHHHHHHHHHhhCCCceEEEecCcc
Confidence            1246999999997    233222  1   1333455554    445555555544 356777776543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.42  E-value=0.00064  Score=44.02  Aligned_cols=40  Identities=30%  Similarity=0.322  Sum_probs=35.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      .-|.+.|.|+.|.+|..+++.|.++|++|.+.+|+.....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            4578999999999999999999999999999999765443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.40  E-value=0.0002  Score=47.81  Aligned_cols=79  Identities=5%  Similarity=-0.070  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++++...+     .+...   .+|..+++..+++ .+......
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-----lGa~~---~i~~~~~~~~~~v-~~~t~g~G   96 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-----YGATD---ILNYKNGHIEDQV-MKLTNGKG   96 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-----HTCSE---EECGGGSCHHHHH-HHHTTTSC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-----hCccc---cccccchhHHHHH-HHHhhccC
Confidence            4778999986 8999999999888998 68889998877554432     34332   2355544433333 33222235


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus        97 ~D~vid~~g~  106 (174)
T d1jqba2          97 VDRVIMAGGG  106 (174)
T ss_dssp             EEEEEECSSC
T ss_pred             cceEEEccCC
Confidence            9999999986

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.40  E-value=0.00044  Score=45.96  Aligned_cols=78  Identities=13%  Similarity=0.014  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEE-EEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVA-ILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ |++|...++.+...|++++ +.++++++++... +    .+... +  .|..+++..++ +.++. .+.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~----~Ga~~-~--i~~~~~~~~~~-i~~~t-~gg   96 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-Q----LGATH-V--INSKTQDPVAA-IKEIT-DGG   96 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-H----HTCSE-E--EETTTSCHHHH-HHHHT-TSC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-H----cCCeE-E--EeCCCcCHHHH-HHHHc-CCC
Confidence            4788999997 8999999998888898654 5566666655443 2    34322 2  35555443333 33332 357


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.+.|.
T Consensus        97 ~D~vid~~G~  106 (174)
T d1f8fa2          97 VNFALESTGS  106 (174)
T ss_dssp             EEEEEECSCC
T ss_pred             CcEEEEcCCc
Confidence            9999999986

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.37  E-value=0.0011  Score=44.05  Aligned_cols=86  Identities=13%  Similarity=0.308  Sum_probs=59.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH---------------HHhhcCCcEEEEEeecCCHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE---------------IAREEKSQVFAIRIDCSDSRS   76 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~~D~~~~~~   76 (167)
                      .+++-+.|. |.+|..+++.|++.|++|++.+|++++.+++.+.               +.. .-.+...+...+.+.+.
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~-~~~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVS-KLKKPRRIILLVKAGQA   79 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH-HBCSSCEEEECSCTTHH
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhh-hhcccceEEEecCchHH
Confidence            356778887 8999999999999999999999999888776542               111 11112333445666677


Q ss_pred             HHHHHHHHH-hcCCccEEEEcCCC
Q 031016           77 VREAFEGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        77 ~~~~~~~~~-~~~~i~~lv~~ag~   99 (167)
                      +....+.+. ...+=+++|...-.
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhccccCcEEEecCcc
Confidence            777777776 55555666666543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.36  E-value=0.00071  Score=44.87  Aligned_cols=79  Identities=13%  Similarity=0.153  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+.+++|.|+ ||+|...+..+...|+ +|+++++++++.+...+     .+....+   |..+ ++.+++..... ..+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----~Ga~~~i---~~~~~~~~~~~~~~~~-~~~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----VGATECV---NPQDYKKPIQEVLTEM-SNG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----TTCSEEE---CGGGCSSCHHHHHHHH-TTS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----hCCeeEE---ecCCchhHHHHHHHHH-hcC
Confidence            5789999999 6899999999999986 78888998888665443     3443222   2222 22333333333 235


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++|.+.|.
T Consensus        98 G~D~vid~~G~  108 (176)
T d2jhfa2          98 GVDFSFEVIGR  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEecCCc
Confidence            79999999987

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00016  Score=48.53  Aligned_cols=42  Identities=14%  Similarity=0.251  Sum_probs=36.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      +.+++|+||+||+|...++..-..|++|+.+++++++.+.+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            458999999999999999988889999999999988865443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.32  E-value=0.0051  Score=39.40  Aligned_cols=113  Identities=12%  Similarity=-0.002  Sum_probs=69.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC--eEEEEecC--hhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY--TVAILARD--LGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~--~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .+.|+|++|.+|..++..+..++.  .+++++.+  ++..+.....+...  ..........|   .++       +   
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-------~---   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-------T---   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-------G---
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-------h---
Confidence            378999999999999999999985  68888854  33333223333321  23333333333   222       1   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           88 GFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        88 ~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      ..-|++|.+||.    +..+-  .+   -.+.++.|..    +.+.+.+.+.+.. ++.++++|-.
T Consensus        69 ~~aDiVvitaG~----~~~~g--~~---R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtNP  121 (142)
T d1o6za1          69 AGSDVVVITAGI----PRQPG--QT---RIDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSNP  121 (142)
T ss_dssp             TTCSEEEECCCC----CCCTT--CC---HHHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             hhcCEEEEeccc----ccccC--Cc---hhhHHHHHHH----HHHHHHHHHHhcCCCceEEEecCh
Confidence            357999999997    33332  23   3445677766    5566777776654 5677777643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.32  E-value=0.00058  Score=45.44  Aligned_cols=79  Identities=14%  Similarity=0.077  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHH-HHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS-VREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   88 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++++...+     .+.+..+   |..+.+. +.+..... ..+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-----lGa~~~i---~~~~~d~~~~~~~~~~-~~~   96 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-----LGATECL---NPKDYDKPIYEVICEK-TNG   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-----TTCSEEE---CGGGCSSCHHHHHHHH-TTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-----cCCcEEE---cCCCchhHHHHHHHHh-cCC
Confidence            5789999986 8999999999999997 68888898888765543     4544332   4333221 23322222 234


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++|-+.|.
T Consensus        97 G~d~vid~~g~  107 (174)
T d1p0fa2          97 GVDYAVECAGR  107 (174)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEEcCCC
Confidence            79999999886

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.32  E-value=0.0058  Score=39.89  Aligned_cols=116  Identities=14%  Similarity=0.157  Sum_probs=70.7

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      +....+.|+|+ |.+|..++..|+.+|.  ++++++++++.++.....+...   .+.......   .+.++        
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~---~d~~~--------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG---KDYNV--------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE---SSGGG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec---cchhh--------
Confidence            34445777796 9999999999999875  7999999887766555555431   122222222   22221        


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                        ...-|++|.++|.    +..+-.  +..   +.++.|..    +.+.+.+.+.+.. .+.++++|..
T Consensus        85 --~~~adivvitag~----~~~~~~--~R~---dll~~N~~----i~~~i~~~i~~~~p~~ivivvtNP  138 (159)
T d2ldxa1          85 --SANSKLVIITAGA----RMVSGQ--TRL---DLLQRNVA----IMKAIVPGVIQNSPDCKIIVVTNP  138 (159)
T ss_dssp             --GTTEEEEEECCSC----CCCTTT--CSS---CTTHHHHH----HHHHHTTTHHHHSTTCEEEECSSS
T ss_pred             --hccccEEEEeccc----ccCCCC--CHH---HHHHHHHH----HHHHHHHHHhccCCCeEEEEeCCc
Confidence              1357999999987    233321  211   22444544    5566677666554 5777777653

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=0.00069  Score=47.02  Aligned_cols=77  Identities=14%  Similarity=0.079  Sum_probs=54.2

Q ss_pred             CCCcEEEEEcCC----------------CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC
Q 031016           10 SCRGIAAIVGVG----------------PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD   73 (167)
Q Consensus        10 ~~~~~~lItGa~----------------~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~   73 (167)
                      +.|+.+|||+|.                |..|.++|+.+..+|++|.++..+...         . .+..+..+  .+.+
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~-~p~~~~~~--~~~t   71 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------P-TPPFVKRV--DVMT   71 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------C-CCTTEEEE--ECCS
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------C-cccccccc--eehh
Confidence            578999999874                789999999999999999888654321         0 23344444  4445


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCC
Q 031016           74 SRSVREAFEGVLSLGFVEVLVYNAYQP  100 (167)
Q Consensus        74 ~~~~~~~~~~~~~~~~i~~lv~~ag~~  100 (167)
                      .++....+.+.  ....|++|.+|++.
T Consensus        72 ~~~m~~~~~~~--~~~~D~~i~aAAvs   96 (223)
T d1u7za_          72 ALEMEAAVNAS--VQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHHHHHHHHHH--GGGCSEEEECCBCC
T ss_pred             hHHHHHHHHhh--hccceeEeeeechh
Confidence            55555444433  35679999999983

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.00062  Score=44.14  Aligned_cols=76  Identities=12%  Similarity=0.057  Sum_probs=57.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      .++|.|. |.+|..+++.|.++|.+|+++..+++...+..+..   ....+.++..|.++++.++++-     ..+.+.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~~~vi~Gd~~d~~~L~~a~-----i~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR---LGDNADVIPGDSNDSSVLKKAG-----IDRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH---HCTTCEEEESCTTSHHHHHHHT-----TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHh---hcCCcEEEEccCcchHHHHHhc-----cccCCEE
Confidence            3777777 79999999999999999999998887665555544   3346788899999997665422     2356777


Q ss_pred             EEcCC
Q 031016           94 VYNAY   98 (167)
Q Consensus        94 v~~ag   98 (167)
                      |...+
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            76654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.26  E-value=0.0018  Score=42.26  Aligned_cols=80  Identities=13%  Similarity=0.188  Sum_probs=53.8

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH---------HhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI---------AREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.|.|+ |.+|.++++.|.++|++|++.+|+++..++..+.-         +.....++.++.+   ..+.++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            556666 89999999999999999999999987766654421         1112344544433   3567888888887


Q ss_pred             -hcCCccEEEEcCC
Q 031016           86 -SLGFVEVLVYNAY   98 (167)
Q Consensus        86 -~~~~i~~lv~~ag   98 (167)
                       ...+=.+++...+
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence             4444445555543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.25  E-value=0.00089  Score=44.55  Aligned_cols=79  Identities=11%  Similarity=0.100  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCH-HHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDS-RSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   88 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|++.++++++++... +    .+....   +|..+. +..+...... ..+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~----~Ga~~~---i~~~~~~~~~~~~~~~~-~~~   97 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A----LGATDC---LNPRELDKPVQDVITEL-TAG   97 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H----TTCSEE---ECGGGCSSCHHHHHHHH-HTS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-H----hCCCcc---cCCccchhhhhhhHhhh-hcC
Confidence            5789999976 9999999999999998 5777788887754333 2    444332   232222 2233333322 235


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|++|-++|.
T Consensus        98 G~d~vie~~G~  108 (174)
T d1e3ia2          98 GVDYSLDCAGT  108 (174)
T ss_dssp             CBSEEEESSCC
T ss_pred             CCcEEEEeccc
Confidence            79999999987

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.24  E-value=0.0066  Score=40.25  Aligned_cols=116  Identities=14%  Similarity=0.090  Sum_probs=64.4

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHc---CC----eEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHE---GY----TVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~---g~----~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      -.+.||||+|.||..++..|++.   |.    .+.+++.+.  +.++...-++..........+.. -++..   +.+  
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~---~~~--   98 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPY---EVF--   98 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHH---HHT--
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccch---hhc--
Confidence            45999999999999999999974   32    344445443  33444444443211112222221 12221   112  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-C-CceEEEecC
Q 031016           84 VLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-G-KGTIIFTGC  151 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~-~g~iv~iss  151 (167)
                          ...|++|..+|.    +..+-  .+   ..+.++.|..    +.+...+.+.+. + ..+|+.+|-
T Consensus        99 ----~~aDvVvi~ag~----~rkpg--~t---R~Dll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          99 ----EDVDWALLIGAK----PRGPG--ME---RAALLDINGQ----IFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             ----TTCSEEEECCCC----CCCTT--CC---HHHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ----cCCceEEEeecc----CCCCC--Cc---HHHHHHHHHH----HHHHHHHHHHhhCCCCcEEEEecC
Confidence                367999999997    33322  33   4455777765    445555555553 2 345666653

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.20  E-value=0.0004  Score=45.96  Aligned_cols=45  Identities=16%  Similarity=0.295  Sum_probs=39.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEI   56 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   56 (167)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+++.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            4688999998 8999999999999997 7999999998888776654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.17  E-value=0.00085  Score=45.47  Aligned_cols=79  Identities=15%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ |++|...++.....|+ +|+++++++++++...+     .+....   .|-.++ ++.+.+.++.....
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-----~Ga~~~---~~~~~~-~~~~~i~~~t~g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-----QGFEIA---DLSLDT-PLHEQIAALLGEPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-----TTCEEE---ETTSSS-CHHHHHHHHHSSSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-----ccccEE---EeCCCc-CHHHHHHHHhCCCC
Confidence            4789999987 8999888888878887 78888888877654332     454322   233333 34333444333346


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|+++.+.|.
T Consensus        95 ~D~vid~vG~  104 (195)
T d1kola2          95 VDCAVDAVGF  104 (195)
T ss_dssp             EEEEEECCCT
T ss_pred             cEEEEECccc
Confidence            9999999986

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00049  Score=46.66  Aligned_cols=43  Identities=23%  Similarity=0.283  Sum_probs=36.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI   56 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   56 (167)
                      |.+.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            67899999 78999999999999999999999987666554444

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.15  E-value=0.0023  Score=42.16  Aligned_cols=78  Identities=21%  Similarity=0.094  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      .+.+++|.|+ |++|...++.+...|+ +|+++++++++++...+     .+... ++  |-. ++.+++..+.. ....
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-----~ga~~-~i--~~~-~~~~~~~~~~~-~~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-----LGADH-VV--DAR-RDPVKQVMELT-RGRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-----TTCSE-EE--ETT-SCHHHHHHHHT-TTCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-----cccce-ee--cCc-ccHHHHHHHhh-CCCC
Confidence            4788999886 9999999999888887 56667887776554432     34432 22  333 33455444422 2346


Q ss_pred             ccEEEEcCCC
Q 031016           90 VEVLVYNAYQ   99 (167)
Q Consensus        90 i~~lv~~ag~   99 (167)
                      +|++|.++|.
T Consensus       101 ~d~vid~~g~  110 (172)
T d1h2ba2         101 VNVAMDFVGS  110 (172)
T ss_dssp             EEEEEESSCC
T ss_pred             ceEEEEecCc
Confidence            9999999987

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.0082  Score=38.52  Aligned_cols=114  Identities=10%  Similarity=0.047  Sum_probs=65.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHc-C--CeEEEEecChhhHHHHHHHHHhhcCCcEEE-EEeecCCHHHHHHHHHHHHhcCCc
Q 031016           15 AAIVGVGPNLGRSIARKFAHE-G--YTVAILARDLGRLSRFADEIAREEKSQVFA-IRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~-g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.|+|++|.+|.+++..|..+ +  .++.+++.++. .+...-.+.. ....... ....-.+.+.    +.      .-
T Consensus         3 V~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h-~~~~~~~~~~~~~~~~~~----~~------~a   70 (145)
T d2cmda1           3 VAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSH-IPTAVKIKGFSGEDATPA----LE------GA   70 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHT-SCSSCEEEEECSSCCHHH----HT------TC
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHC-CccccCCcEEEcCCCccc----cC------CC
Confidence            679999999999999988754 4  57889887653 3333344543 2222111 1112222222    22      46


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      |++|.++|.    +..+-.  +.   .++++.|..-.    +...+.+.+.. ++.++++|..+
T Consensus        71 DvvvitaG~----~~k~g~--~R---~dl~~~N~~i~----~~v~~~i~~~~p~aivivvtNPv  121 (145)
T d2cmda1          71 DVVLISAGV----RRKPGM--DR---SDLFNVNAGIV----KNLVQQVAKTCPKACIGIITNPV  121 (145)
T ss_dssp             SEEEECCSC----CCCTTC--CG---GGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSSH
T ss_pred             CEEEECCCc----cCCCCc--ch---hhHHHHHHHHH----HHHHHHHHhhCCCcEEEEccCCc
Confidence            999999997    333322  32   34466776544    44444444443 46777777643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.14  E-value=0.00048  Score=45.92  Aligned_cols=48  Identities=23%  Similarity=0.304  Sum_probs=41.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHh
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAR   58 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~   58 (167)
                      ++++|.++|.|+ ||.+++++..|.+.| +|.+..|+.++.+++.+.+..
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            357999999998 689999999997766 999999999999988887765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.14  E-value=0.00048  Score=45.74  Aligned_cols=42  Identities=26%  Similarity=0.339  Sum_probs=37.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD   54 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   54 (167)
                      +|++.|.|+ |.+|.+++..|+++|++|.+.+|++++.+.+.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478999999 899999999999999999999999887766554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=97.11  E-value=0.0014  Score=43.20  Aligned_cols=79  Identities=10%  Similarity=0.119  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHH-HHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRS-VREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   88 (167)
                      .+.+++|.|+ |++|...+..+...|+ +|+++++++++++...+     .+.+..+   |..+++. .++..... ..+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-----~GAd~~i---n~~~~~~~~~~~~~~~-~~~   97 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-----FGATDFV---NPNDHSEPISQVLSKM-TNG   97 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----TTCCEEE---CGGGCSSCHHHHHHHH-HTS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-----cCCcEEE---cCCCcchhHHHHHHhh-ccC
Confidence            5788999986 7788888888888877 68888888887765443     4544322   3333322 22222222 235


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|+++.+.|.
T Consensus        98 G~d~vid~~G~  108 (175)
T d1cdoa2          98 GVDFSLECVGN  108 (175)
T ss_dssp             CBSEEEECSCC
T ss_pred             CcceeeeecCC
Confidence            79999999986

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.08  E-value=0.0067  Score=39.17  Aligned_cols=120  Identities=9%  Similarity=-0.009  Sum_probs=68.8

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ..+.|+|+ |.+|..++..+..++. ++++++++++.++.....+.+.   .+.+......+  +.++.          .
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~----------~   70 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDL----------A   70 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGG----------T
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccccc----------C
Confidence            34777796 8999999998888775 7999999887766554444331   22232222221  22211          3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCCc
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCSA  153 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  153 (167)
                      .-|++|.++|.    +..+-.......-.+.+..|..    +.+.+.+.+.+.. .+.++++|-.+
T Consensus        71 ~advvvitag~----~~~~g~~~~~~~R~~l~~~N~~----iv~~i~~~i~~~~p~aivivvtNPv  128 (150)
T d1t2da1          71 GADVVIVTAGF----TKAPGKSDKEWNRDDLLPLNNK----IMIEIGGHIKKNCPNAFIIVVTNPV  128 (150)
T ss_dssp             TCSEEEECCSC----SSCTTCCSTTCCGGGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             CCcEEEEeccc----ccCCCCCccccchhHHHHHHHH----HHHHHHHHHHhcCCCeEEEEecCch
Confidence            57999999997    2222211111112334566654    4555555555543 46777776543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.07  E-value=0.0045  Score=40.76  Aligned_cols=75  Identities=21%  Similarity=0.217  Sum_probs=57.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ....++|.|+ |-.|++-++.....|++|.+++.+.++++++......    ++.   .-..+++.+++.+.      .-
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~----~~~---~~~~~~~~l~~~~~------~a   96 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVE---LLYSNSAEIETAVA------EA   96 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSE---EEECCHHHHHHHHH------TC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc----cce---eehhhhhhHHHhhc------cC
Confidence            4678999998 6899999999999999999999999888776655432    333   33456666766555      46


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|.++-+
T Consensus        97 DivI~aali  105 (168)
T d1pjca1          97 DLLIGAVLV  105 (168)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEEeeec
Confidence            999999976

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.07  E-value=0.0016  Score=41.85  Aligned_cols=111  Identities=16%  Similarity=0.097  Sum_probs=63.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.|+|+ |.+|..++..++.++.  ++++++++++.++.....+.+.  ..........   +.+       +   ...-
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-------~---~~~a   69 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-------D---VKDC   69 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-------G---GTTC
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-------H---hCCC
Confidence            566687 9999999999999875  7999998887655444455431  1112222211   121       1   2356


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-CCceEEEecCC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-GKGTIIFTGCS  152 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~  152 (167)
                      |++|.++|.    +..+.     +.-.+.++.|..    +.+.+.+.+.+. +.+.++++|-.
T Consensus        70 divvitag~----~~~~~-----~~r~~l~~~N~~----i~~~i~~~i~~~~p~ai~ivvtNP  119 (142)
T d1y6ja1          70 DVIVVTAGA----NRKPG-----ETRLDLAKKNVM----IAKEVTQNIMKYYNHGVILVVSNP  119 (142)
T ss_dssp             SEEEECCCC---------------CHHHHHHHHHH----HHHHHHHHHHHHCCSCEEEECSSS
T ss_pred             ceEEEeccc----ccCcC-----cchhHHhhHHHH----HHHHHHHHhhccCCCceEEEecCh
Confidence            999999997    22222     223455666665    455555555554 35677777654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.04  E-value=0.0093  Score=38.92  Aligned_cols=115  Identities=12%  Similarity=0.061  Sum_probs=71.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .++.+.|+|+ |.+|..++..++.+|.  ++++++.+++..+.....+.+.   .+.......   .+.++.        
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~~--------   86 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSVT--------   86 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGGG--------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhhc--------
Confidence            4566788896 8999999999999985  7999999887766555555431   122222222   222221        


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                        ..-|++|.+||.   . ..+-  .+.   .+.++.|..    +++.+.+.+.+.. .+.++++|-.
T Consensus        87 --~~adiVVitAg~---~-~~~g--~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtNP  139 (160)
T d1i0za1          87 --ANSKIVVVTAGV---R-QQEG--ESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSNP  139 (160)
T ss_dssp             --TTCSEEEECCSC---C-CCTT--CCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             --ccccEEEEecCC---c-cccC--cch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCCc
Confidence              356999999997   2 2222  222   234455555    5566666666654 5677777653

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.97  E-value=0.012  Score=37.42  Aligned_cols=112  Identities=12%  Similarity=0.097  Sum_probs=65.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.|+|+ |.+|..++..++.+|.  ++++++.+++.++.....+...   ...+..+...  ++.+..          ..
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~----------~d   69 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT----------AN   69 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG----------TT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh----------cC
Confidence            567796 8999999999999873  7999998887655443333221   2223333221  223221          25


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      -|++|.++|.    +..+-  .+.   .+.++.|..-    .+.+.+.+.+.. .+.++++|-.
T Consensus        70 advvvitag~----~~~~g--~~r---~~l~~~N~~i----~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1guza1          70 SDIVIITAGL----PRKPG--MTR---EDLLMKNAGI----VKEVTDNIMKHSKNPIIIVVSNP  120 (142)
T ss_dssp             CSEEEECCSC----CCCTT--CCH---HHHHHHHHHH----HHHHHHHHHHHCSSCEEEECCSS
T ss_pred             CeEEEEEEec----CCCCC--Cch---HHHHHHHHHH----HHHHHHHhhccCCCeEEEEecCC
Confidence            6999999997    22222  222   3445556553    444554444433 4666666543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.94  E-value=0.0025  Score=41.56  Aligned_cols=41  Identities=20%  Similarity=0.142  Sum_probs=34.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      .+.+++|.|+ |++|...++.+...|++|+++++++++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4788999875 8999999888888999999999988776544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.88  E-value=0.0055  Score=39.10  Aligned_cols=111  Identities=13%  Similarity=0.112  Sum_probs=67.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.|.|+ |.+|..++..++.++.  ++++++.+++.++.....+...  ..........   +.+++          ..-
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~~----------~~a   68 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYADL----------KGS   68 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGGG----------TTC
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHHh----------cCC
Confidence            556687 8999999999998874  7999999887766444444321  2223333322   22222          246


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      |++|.++|.    +..+  ..+.   .+++..|..    +.+...+.+.+.. .+.++++|-.
T Consensus        69 divvitag~----~~~~--g~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvtNP  118 (140)
T d1a5za1          69 DVVIVAAGV----PQKP--GETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVTNP  118 (140)
T ss_dssp             SEEEECCCC----CCCS--SCCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             CEEEEeccc----ccCC--Ccch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeCCc
Confidence            999999997    2222  2222   334555654    5566666666644 4666666643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.85  E-value=0.00076  Score=45.39  Aligned_cols=44  Identities=23%  Similarity=0.221  Sum_probs=36.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA   57 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   57 (167)
                      |.+.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            45888998 789999999999999999999999887666554443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.00074  Score=40.11  Aligned_cols=37  Identities=19%  Similarity=0.186  Sum_probs=32.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      +++|+++|.|. |.-|+++++.|.++|++|++.+.+..
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            57899999999 67899999999999999999987543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.77  E-value=0.0019  Score=42.58  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC-HHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD-SRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   88 (167)
                      .+.+++|.|+ ||+|...++.+...|+ +|+++++++++.+.. ++    .+.+..+   |..+ .+.+++.+.+.. .+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~----lGa~~~i---~~~~~~~~~~~~~~~~~-~~   97 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KE----FGATECI---NPQDFSKPIQEVLIEMT-DG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HH----HTCSEEE---CGGGCSSCHHHHHHHHT-TS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HH----hCCcEEE---eCCchhhHHHHHHHHHc-CC
Confidence            4789999998 5899999999999997 566667777765433 33    3443322   3322 233444444332 34


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|+++.+.|.
T Consensus        98 g~D~vid~~G~  108 (176)
T d2fzwa2          98 GVDYSFECIGN  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEeeecCCC
Confidence            69999999986

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.72  E-value=0.014  Score=37.17  Aligned_cols=113  Identities=15%  Similarity=0.093  Sum_probs=64.6

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.+.|+|+ |.+|..++..|+.++. ++++++.+++..+.....+...   .+........  .|.++.          .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~----------~   68 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT----------A   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG----------T
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh----------c
Confidence            45677796 9999999999998875 8999998877655444444321   1222222111  122211          2


Q ss_pred             CccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           89 FVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        89 ~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      .-|++|.+||.    +..+-     ++-.+.+..|..    +.+...+.+.+.. .+.++++|-
T Consensus        69 ~advvvitag~----~~~~~-----~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          69 NSDVIVVTSGA----PRKPG-----MSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             TCSEEEECCSC----C--------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECSS
T ss_pred             CCCEEEEeeec----cCCcC-----cchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeCC
Confidence            46999999997    22221     223344556654    5566666666644 566666654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.70  E-value=0.00048  Score=44.63  Aligned_cols=37  Identities=14%  Similarity=0.185  Sum_probs=32.7

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ..+++|++||+|| |.+|..-++.|++.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3468999999999 679999999999999999988653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.68  E-value=0.0089  Score=38.77  Aligned_cols=83  Identities=17%  Similarity=0.245  Sum_probs=52.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh------cCCcEEEEEeecCCHHHHHHHHH---HHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE------EKSQVFAIRIDCSDSRSVREAFE---GVL   85 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~~~~---~~~   85 (167)
                      +-|.|. |.+|..+|+.|+++|++|++.+|++++.+++.+.-...      .-.+..++..=+.+++.++.++.   .+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            455665 89999999999999999999999988777654311000      00112333445666777777663   233


Q ss_pred             -hcCCccEEEEcCC
Q 031016           86 -SLGFVEVLVYNAY   98 (167)
Q Consensus        86 -~~~~i~~lv~~ag   98 (167)
                       ...+=+++|...-
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence             3334455665553

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.52  E-value=0.0079  Score=36.83  Aligned_cols=34  Identities=21%  Similarity=0.270  Sum_probs=30.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            478999998 7999999999999999999998754

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.46  E-value=0.025  Score=35.98  Aligned_cols=112  Identities=13%  Similarity=0.023  Sum_probs=66.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.|+|+ |.+|..++..++.+|.  ++++++.+++.++.....+++.   .........  -+|.+++          ..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~--~~d~~~~----------~~   69 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG--GADYSLL----------KG   69 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE--ESCGGGG----------TT
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCcccc--CCCHHHh----------cc
Confidence            556686 9999999999998874  6999999887765444444321   122222221  1122211          35


Q ss_pred             ccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecCC
Q 031016           90 VEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGCS  152 (167)
Q Consensus        90 i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  152 (167)
                      -|++|.++|.    +..+-  .+   -.+.+..|..    +.+...+.+.+.. .+.++++|-.
T Consensus        70 adiVvitag~----~~~~g--~~---r~~l~~~n~~----i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1ojua1          70 SEIIVVTAGL----ARKPG--MT---RLDLAHKNAG----IIKDIAKKIVENAPESKILVVTNP  120 (142)
T ss_dssp             CSEEEECCCC----CCCSS--CC---HHHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             ccEEEEeccc----cCCCC--Cc---hHHHHHHhhH----HHHHHHHHHHhhCCCcEEEEecCC
Confidence            6999999987    22222  22   3445555665    4455555555543 4677776653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.41  E-value=0.049  Score=34.61  Aligned_cols=111  Identities=12%  Similarity=0.087  Sum_probs=66.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      +.|+|+ |.+|..++..++.+|.  ++++++.+++.++.....++.-  ..........  .+.+..          ..-
T Consensus         4 i~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~----------~da   70 (143)
T d1llda1           4 LAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC----------RDA   70 (143)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG----------TTC
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh----------hCC
Confidence            566687 9999999999999885  7999999887766544444431  1122222211  122211          246


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhcC-CceEEEecC
Q 031016           91 EVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVERG-KGTIIFTGC  151 (167)
Q Consensus        91 ~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  151 (167)
                      |++|.++|.    +..+.  .+.   .+.+..|..    +.+.+.+.+.+.. .+.++++|-
T Consensus        71 DvVVitaG~----~~~~g--~~R---~dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          71 DMVVITAGP----RQKPG--QSR---LELVGATVN----ILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             SEEEECCCC----CCCTT--CCH---HHHHHHHHH----HHHHHHHHHHHHCTTSEEEECCS
T ss_pred             cEEEEeccc----ccCCC--Cch---hhhhhhhHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence            999999997    23322  333   345666765    4455555555544 466666664

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.38  E-value=0.0043  Score=42.14  Aligned_cols=43  Identities=21%  Similarity=0.154  Sum_probs=37.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      ++++|+++|-| .|.+|..+++.|.+.|++|++.+.+.......
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            57899999987 58999999999999999999998887665543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.025  Score=34.42  Aligned_cols=71  Identities=17%  Similarity=0.131  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ...++.|.|+ |=+|+-++....+.|+++++.+.+++..-         ....-.++..|..|.+.+.++....    .+
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA---------~~va~~~i~~~~~d~~~l~~~~~~~----~~   75 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA---------MHVAHRSHVINMLDGDALRRVVELE----KP   75 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG---------GGGSSEEEECCTTCHHHHHHHHHHH----CC
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch---------hhcCCeEEECCCCCHHHHHHHHHhh----CC
Confidence            4567999996 68999999999999999999988755311         1111255678999999998888764    57


Q ss_pred             cEEEE
Q 031016           91 EVLVY   95 (167)
Q Consensus        91 ~~lv~   95 (167)
                      |++.+
T Consensus        76 DviT~   80 (111)
T d1kjqa2          76 HYIVP   80 (111)
T ss_dssp             SEEEE
T ss_pred             ceEEE
Confidence            88743

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.31  E-value=0.033  Score=37.40  Aligned_cols=62  Identities=11%  Similarity=0.134  Sum_probs=44.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH--------HHHHHHHhhcCCcEEEEEeecCCH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS--------RFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~--------~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      ++.+|++.|.|. |.||+.+++.+...|++|+..++......        .+.+.+   ...++..+.+.++.+
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l---~~sDii~~~~plt~~  109 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLY---KQADVISLHVPDVPA  109 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHH---HHCSEEEECSCCCGG
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccceeeeccccccc---cccccccccCCcccc
Confidence            467999999998 79999999999999999998876432211        122222   235778888877754

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.24  E-value=0.023  Score=36.52  Aligned_cols=115  Identities=10%  Similarity=0.060  Sum_probs=61.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC-------eEEEEecCh--hhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY-------TVAILARDL--GRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      .+.|+||+|.+|..++..|++++-       .+++.+.++  +.++.+.-++..........+.  .++.  ..+.+   
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~--~~~~~---   77 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATDK--EEIAF---   77 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EESC--HHHHT---
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccc--cCcc--ccccc---
Confidence            589999999999999999987542       245555433  3344443333321122222222  2211  11112   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhHHHHHHHHHHHHhhHhc-C-CceEEEecC
Q 031016           85 LSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISSLGAFLCAQQVLSGMVER-G-KGTIIFTGC  151 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~-~g~iv~iss  151 (167)
                         ...|++|.++|.    +..+-  .+.++   .++.|..    +.+...+.+.+. + .+.++.+|-
T Consensus        78 ---~~~dvVVitag~----~~~~g--~sr~d---ll~~N~~----i~k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          78 ---KDLDVAILVGSM----PRRDG--MERKD---LLKANVK----IFKCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             ---TTCSEEEECCSC----CCCTT--CCTTT---THHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---CCceEEEEeccc----CCCCC--CchhH---HHHHhHH----HHHHHHHHHHhhCCCceEEEEecC
Confidence               357999999997    33322  22222   3555554    556666666553 3 345666653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.21  E-value=0.028  Score=37.67  Aligned_cols=63  Identities=14%  Similarity=0.210  Sum_probs=45.8

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhH-H---------HHHHHHHhhcCCcEEEEEeecCCH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRL-S---------RFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~-~---------~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      ..+.+|++.|.|. |.||+.+++.+...|++|+..++..... .         .+.+.+   ...++..+.+.++++
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll---~~sD~i~~~~plt~~  117 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLL---FHSDCVTLHCGLNEH  117 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHH---HHCSEEEECCCCCTT
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhcc---ccCCEEEEeeccccc
Confidence            3468999999988 7999999999999999999987743211 1         122222   235788888888754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.011  Score=36.70  Aligned_cols=34  Identities=21%  Similarity=0.298  Sum_probs=30.3

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|+ |.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478899998 6899999999999999999998853

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.19  E-value=0.015  Score=35.88  Aligned_cols=34  Identities=21%  Similarity=0.253  Sum_probs=30.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|| |.+|.++|..|.++|.+|.++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            578899988 7999999999999999999998764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.11  E-value=0.011  Score=36.53  Aligned_cols=34  Identities=15%  Similarity=0.223  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|| |.||.++|..|.+.|.+|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            478999998 7999999999999999999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.10  E-value=0.012  Score=36.08  Aligned_cols=34  Identities=15%  Similarity=0.116  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|+ |.+|.++|..|.+.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            367888888 7999999999999999999998754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.10  E-value=0.051  Score=35.07  Aligned_cols=83  Identities=18%  Similarity=0.135  Sum_probs=52.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecChhhHHHHHHHHHh---------h--cCCcEEEEEeecCCHHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDLGRLSRFADEIAR---------E--EKSQVFAIRIDCSDSRSVRE   79 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~---------~--~~~~~~~~~~D~~~~~~~~~   79 (167)
                      |.++|.|. |-+|.++++.|.+.|+  +|++.+++++.++...+.-..         .  ...++.++.   +-++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            46888886 8999999999999986  688889988777665443110         0  112233322   23567777


Q ss_pred             HHHHHH-hcCCccEEEEcCCC
Q 031016           80 AFEGVL-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        80 ~~~~~~-~~~~i~~lv~~ag~   99 (167)
                      +++++. ...+=.+++...+.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888876 44444455555543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.10  E-value=0.0081  Score=39.06  Aligned_cols=85  Identities=12%  Similarity=0.127  Sum_probs=50.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh------cCCcEEEEEeecCCHHHHHHHHHHH---
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE------EKSQVFAIRIDCSDSRSVREAFEGV---   84 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~~~~~~---   84 (167)
                      .+-+.|. |-+|.++|++|+++|++|.+.+|++++.+.+...-...      ...+...+..-+.+.+..+.++...   
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            4666665 89999999999999999999999987766543221100      0111223344455566666665432   


Q ss_pred             H-hcCCccEEEEcCCC
Q 031016           85 L-SLGFVEVLVYNAYQ   99 (167)
Q Consensus        85 ~-~~~~i~~lv~~ag~   99 (167)
                      . ...+=+++|.+.-.
T Consensus        82 ~~~l~~g~iiid~st~   97 (162)
T d3cuma2          82 LAHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHHSCTTCEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence            2 22333455555433

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.08  E-value=0.011  Score=36.33  Aligned_cols=34  Identities=21%  Similarity=0.195  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            477899988 7999999999999999999998753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0089  Score=39.09  Aligned_cols=40  Identities=20%  Similarity=0.186  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR   48 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~   48 (167)
                      ..+.+|+++|.|- |.+|+.+|+.+...|++|++.+.++-+
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            3467999999987 699999999999999999999988754

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.07  E-value=0.0041  Score=38.90  Aligned_cols=70  Identities=17%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |.++|.|. |.+|..+++.|.  |..|+++..+++..+...    . .  .+.++.+|.++++.++++     ...+-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~-~--~~~~i~Gd~~~~~~L~~a-----~i~~A~~   65 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----R-S--GANFVHGDPTRVSDLEKA-----NVRGARA   65 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----H-T--TCEEEESCTTSHHHHHHT-----TCTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----h-c--CccccccccCCHHHHHHh-----hhhcCcE
Confidence            45778876 799999999984  557888888877655442    2 2  467788999998776542     1245677


Q ss_pred             EEEcC
Q 031016           93 LVYNA   97 (167)
Q Consensus        93 lv~~a   97 (167)
                      +|.+.
T Consensus        66 vi~~~   70 (129)
T d2fy8a1          66 VIVNL   70 (129)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            76554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.02  E-value=0.016  Score=35.56  Aligned_cols=35  Identities=20%  Similarity=0.310  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ..+.++|.|+ |.||..+|..|.+.|.+|.++.+.+
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3477999998 7999999999999999999987653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.02  E-value=0.016  Score=35.79  Aligned_cols=35  Identities=20%  Similarity=0.232  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ..|.++|.|+ |.+|.++|..|.+.|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888887 7999999999999999999997754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.00  E-value=0.044  Score=35.79  Aligned_cols=40  Identities=25%  Similarity=0.548  Sum_probs=33.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      +-|.|. |.+|..+++.|++.|++|.+.+|++++.+++.+.
T Consensus         4 IGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            445554 8999999999999999999999999888877654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.012  Score=38.59  Aligned_cols=42  Identities=19%  Similarity=0.261  Sum_probs=35.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      ++.||.++|.|-+.-+|+.++..|.++|++|.+.......+.
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            457999999999999999999999999999988765554443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.88  E-value=0.0065  Score=41.63  Aligned_cols=34  Identities=38%  Similarity=0.542  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ..|.++|+|| |-.|...|..|.++|++|.++.|+
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3567999998 799999999999999999999874

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.84  E-value=0.012  Score=36.36  Aligned_cols=34  Identities=12%  Similarity=0.228  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|+ |-||.++|..|.+.|.+|.++.|.+
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            477888888 7999999999999999999998864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.84  E-value=0.0048  Score=39.92  Aligned_cols=32  Identities=19%  Similarity=0.212  Sum_probs=29.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      ++|.|+ |.+|..++..|++.|++|.+++|+++
T Consensus         3 I~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           3 ITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            678888 99999999999999999999998764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.84  E-value=0.034  Score=36.87  Aligned_cols=62  Identities=13%  Similarity=0.239  Sum_probs=45.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHH---------HHHHHHhhcCCcEEEEEeecCCH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSR---------FADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~---------~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .+.+|++.|.|. |.||+.+++.+...|.+|+..++.......         +.+.+   ...++..+.+.++++
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell---~~sDiv~~~~Plt~~  111 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLL---ARADFISVHLPKTPE  111 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHH---HHCSEEEECCCCSTT
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHH---hhCCEEEEcCCCCch
Confidence            467899999996 899999999999999999998875432221         11222   236788888888864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.011  Score=38.89  Aligned_cols=42  Identities=17%  Similarity=0.163  Sum_probs=36.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      ++.||.++|.|-+.-+|+.++..|.++|++|.+.......+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            468999999999999999999999999999998876555443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.77  E-value=0.02  Score=34.80  Aligned_cols=34  Identities=15%  Similarity=0.217  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            477888887 7999999999999999999997753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.77  E-value=0.017  Score=35.64  Aligned_cols=33  Identities=24%  Similarity=0.351  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      .+.++|.|| |.||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            466888888 799999999999999999988775

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.76  E-value=0.027  Score=37.91  Aligned_cols=100  Identities=13%  Similarity=0.204  Sum_probs=62.0

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-------HHHHHHHHHhhcCCcEEEEEeecCCHHH--H-
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-------LSRFADEIAREEKSQVFAIRIDCSDSRS--V-   77 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~--~-   77 (167)
                      .++.+|++.|.|. |.||+.+++.+...|.+|+..++....       ...+.+.++   ..++..+.+.++++..  + 
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~---~~D~v~~~~plt~~T~~li~  116 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFK---QSDVIDLHVPGIEQNTHIIN  116 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHH---HCSEEEECCCCCGGGTTSBC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHH---hcccceeeeccccccccccc
Confidence            3467899999998 799999999999999999998774321       012222222   2578888888875432  1 


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 031016           78 REAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAIS  123 (167)
Q Consensus        78 ~~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n  123 (167)
                      ++.+..+   .+=.++||.+ .      +.+  ++.+++.+.++.+
T Consensus       117 ~~~l~~m---k~~a~lIN~a-R------G~v--vde~aL~~aL~~g  150 (199)
T d1dxya1         117 EAAFNLM---KPGAIVINTA-R------PNL--IDTQAMLSNLKSG  150 (199)
T ss_dssp             HHHHHHS---CTTEEEEECS-C------TTS--BCHHHHHHHHHTT
T ss_pred             HHHhhcc---CCceEEEecc-c------Hhh--hhhHHHHHHHhcC
Confidence            2333333   3334555554 3      222  5667766666555

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.74  E-value=0.034  Score=36.79  Aligned_cols=100  Identities=12%  Similarity=0.146  Sum_probs=61.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-----HHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-----LSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      .+.+|++.|.|. |.||+.+++.+...|.+|+..++.+..     ...+.+.+   ...++..+.+.++++  -+.++.+
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell---~~sDiv~~~~pl~~~--t~~li~~  112 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEAL---REARAAVCALPLNKH--TRGLVKY  112 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHH---TTCSEEEECCCCSTT--TTTCBCH
T ss_pred             cccCceEEEecc-ccccccceeeeeccccccccccccccccceeeeechhhhh---hccchhhcccccccc--ccccccc
Confidence            468999999998 689999999999999999999885421     11122222   346777777777653  2222322


Q ss_pred             H-H-hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 031016           84 V-L-SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAIS  123 (167)
Q Consensus        84 ~-~-~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n  123 (167)
                      - . ...+=.++||.+ .      +.  -++.+++.+.++.+
T Consensus       113 ~~l~~mk~~ailIN~~-R------G~--ivd~~aL~~aL~~~  145 (181)
T d1qp8a1         113 QHLALMAEDAVFVNVG-R------AE--VLDRDGVLRILKER  145 (181)
T ss_dssp             HHHTTSCTTCEEEECS-C------GG--GBCHHHHHHHHHHC
T ss_pred             ceeeeccccceEEecc-c------cc--cccchhhhhhcccC
Confidence            2 2 233434445544 3      22  25566665555543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.74  E-value=0.0057  Score=41.03  Aligned_cols=40  Identities=13%  Similarity=0.185  Sum_probs=34.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFA   53 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   53 (167)
                      +.+.|.|+ |..|.+++..|++.|++|.+.+|+++..+++.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            45888888 68999999999999999999999987766554

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.73  E-value=0.018  Score=35.44  Aligned_cols=34  Identities=32%  Similarity=0.527  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .|.++|.|| |.+|.++|..|.++|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            367888888 7999999999999999999998754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.69  E-value=0.017  Score=38.73  Aligned_cols=81  Identities=10%  Similarity=0.082  Sum_probs=62.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +.++=+|-|+||...++.+.+ . +.+|+.++++++.++...+.++. ++.++.++..++.+...+   +... ...++|
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-~~~r~~~~~~~f~~~~~~---~~~~-~~~~vd   97 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-FSDRVSLFKVSYREADFL---LKTL-GIEKVD   97 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-GTTTEEEEECCGGGHHHH---HHHT-TCSCEE
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-ccccccchhHHHhhHHHH---HHHc-CCCCcc
Confidence            444557888889999998887 3 46899999999999888888877 778899999998764432   3322 246899


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      +++.-.|.
T Consensus        98 gIl~DlGv  105 (192)
T d1m6ya2          98 GILMDLGV  105 (192)
T ss_dssp             EEEEECSC
T ss_pred             eeeeccch
Confidence            99999987

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.60  E-value=0.078  Score=36.49  Aligned_cols=35  Identities=26%  Similarity=0.345  Sum_probs=30.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +.+++++|.|+ ||+|..+++.|+..|- ++.+++.+
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            35688999997 7999999999999997 78888763

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.60  E-value=0.013  Score=37.64  Aligned_cols=78  Identities=18%  Similarity=0.352  Sum_probs=49.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhh--------cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIARE--------EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.+.|+ |.+|.++++.|++.| ++|++.+|++++.+++.++..-.        ...++.++.+   .|+.++++++++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v~~~Div~lav---kP~~~~~v~~~l~   78 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELHSDDVLILAV---KPQDMEAACKNIR   78 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCCTTSEEEECS---CHHHHHHHHTTCC
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccccccceEEEec---CHHHHHHhHHHHh
Confidence            456676 899999999999887 79999999998888776653211        1113333322   3667777666553


Q ss_pred             hcCCccEEEEcCC
Q 031016           86 SLGFVEVLVYNAY   98 (167)
Q Consensus        86 ~~~~i~~lv~~ag   98 (167)
                      ..+  ..+|..+.
T Consensus        79 ~~~--~~viS~~a   89 (152)
T d1yqga2          79 TNG--ALVLSVAA   89 (152)
T ss_dssp             CTT--CEEEECCT
T ss_pred             hcc--cEEeeccc
Confidence            111  24555443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.44  E-value=0.022  Score=39.30  Aligned_cols=47  Identities=17%  Similarity=0.251  Sum_probs=39.6

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHH
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADE   55 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   55 (167)
                      .++++|+++|-|- |.+|..+++.|.+.|++|++.+.+....+.....
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            3568999999887 7999999999999999999998887776665543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.43  E-value=0.054  Score=35.92  Aligned_cols=63  Identities=11%  Similarity=0.051  Sum_probs=45.2

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH--HH--------HHHHHhhcCCcEEEEEeecCCH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS--RF--------ADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~--~~--------~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .+.++++.|.|. |.||+++++++...|.+|+..++......  +.        .+++-  ...++..+.+.++++
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l--~~sD~v~~~~plt~~  113 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMY--PVCDVVTLNCPLHPE  113 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHG--GGCSEEEECSCCCTT
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHH--Hhccchhhccccccc
Confidence            457899999997 79999999999999999999987432111  11        11111  346788888888864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.41  E-value=0.015  Score=37.29  Aligned_cols=41  Identities=20%  Similarity=0.362  Sum_probs=33.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI   56 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   56 (167)
                      +.+.|+ |-+|.++++.|.+.|+++++..|+.++.+++.+..
T Consensus         3 Ig~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            345555 89999999999999999999999988877776554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.39  E-value=0.019  Score=38.09  Aligned_cols=36  Identities=22%  Similarity=0.221  Sum_probs=32.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .+.|.++|+|| |.-|.+.|..|+++|++|.++.+.+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            36789999999 7999999999999999999998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.37  E-value=0.046  Score=33.25  Aligned_cols=35  Identities=17%  Similarity=0.170  Sum_probs=30.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .+|.++|.|+ |.+|..+|..|.+.|.+|.++.|.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            3688888888 7999999999999999999998754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.31  E-value=0.076  Score=35.17  Aligned_cols=99  Identities=11%  Similarity=0.134  Sum_probs=61.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh-------HHHHHHHHHhhcCCcEEEEEeecCCHHHH---H
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR-------LSRFADEIAREEKSQVFAIRIDCSDSRSV---R   78 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~---~   78 (167)
                      .+.++++.|.|. |.||+.+++.+...|.+|+..++....       ...+.+.++   ..++..+.+.++++..-   +
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~---~sDii~i~~plt~~T~~li~~  116 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLN---MSDVVSLHVPENPSTKNMMGA  116 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHH---HCSEEEECCCSSTTTTTCBCH
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHh---hccceeecccCCcchhhhccH
Confidence            467899999976 799999999999999999998764321       111222332   25788888888854311   2


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 031016           79 EAFEGVLSLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAIS  123 (167)
Q Consensus        79 ~~~~~~~~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n  123 (167)
                      +.++.+   .+=-++||.+ .      +.  -++.+++.+.++-+
T Consensus       117 ~~l~~m---k~~a~lIN~a-R------G~--lvde~aL~~aL~~~  149 (188)
T d1sc6a1         117 KEISLM---KPGSLLINAS-R------GT--VVDIPALADALASK  149 (188)
T ss_dssp             HHHHHS---CTTEEEEECS-C------SS--SBCHHHHHHHHHTT
T ss_pred             HHHhhC---CCCCEEEEcC-c------HH--hhhhHHHHHHHHcC
Confidence            333333   3434455544 3      22  25666766655544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.28  E-value=0.062  Score=34.19  Aligned_cols=35  Identities=23%  Similarity=0.180  Sum_probs=28.5

Q ss_pred             CcEEEEE-cCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIV-GVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lIt-Ga~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ++.++|. .+++.||.++|..|+++|++|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4555555 4568999999999999999999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.21  E-value=0.049  Score=36.34  Aligned_cols=62  Identities=13%  Similarity=0.189  Sum_probs=44.3

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH-----------HHHHHHHhhcCCcEEEEEeecCCH
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS-----------RFADEIAREEKSQVFAIRIDCSDS   74 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~-----------~~~~~l~~~~~~~~~~~~~D~~~~   74 (167)
                      .+.+|++.|.|. |.||+.+++.+...|.+|+..++......           .+.+.+   ...++..+.+.++++
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll---~~sD~v~l~~plt~~  116 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLL---SVSQFFSLNAPSTPE  116 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHH---HHCSEEEECCCCCTT
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHH---hhCCeEEecCCCCch
Confidence            457899999998 79999999999999999998876432111           112222   235777777877754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.15  E-value=0.076  Score=36.06  Aligned_cols=78  Identities=15%  Similarity=0.043  Sum_probs=60.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.++|.+|+++|--.++.-+++  |.+|+.+.++++-.+...+.++...-.++.++..|..+..         ...++.
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~---------~~~~pf  146 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF---------PPKAPY  146 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC---------GGGCCE
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC---------cccCcc
Confidence            46789999999888888877776  4679999999888888877777634467999998885321         134789


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++.+++.
T Consensus       147 D~Iiv~~a~  155 (215)
T d1jg1a_         147 DVIIVTAGA  155 (215)
T ss_dssp             EEEEECSBB
T ss_pred             eeEEeeccc
Confidence            999998877

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.11  E-value=0.035  Score=36.25  Aligned_cols=44  Identities=14%  Similarity=0.083  Sum_probs=36.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA   57 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   57 (167)
                      .++.+|..|++.|   ..+..|+++|++|+.++-++..++...+..+
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~   63 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG   63 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence            5789999999776   3667889999999999999988888777664

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.07  E-value=0.027  Score=34.93  Aligned_cols=34  Identities=15%  Similarity=0.208  Sum_probs=30.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      .+.++|.|+ |-||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            578999998 7999999999999999999997743

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.07  E-value=0.098  Score=35.28  Aligned_cols=80  Identities=10%  Similarity=-0.044  Sum_probs=57.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+.++|-.|+++|.-.+...++.....+|+.++.+++..+...+.++...-.++.++..|..+..         ...+++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~---------~~~~~f  145 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV---------PEFSPY  145 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC---------GGGCCE
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc---------ccccch
Confidence            46789999998776666555555555689999999998888888887634446777766654311         123679


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++.+++.
T Consensus       146 D~I~~~~~~  154 (213)
T d1dl5a1         146 DVIFVTVGV  154 (213)
T ss_dssp             EEEEECSBB
T ss_pred             hhhhhhccH
Confidence            999988876

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.03  E-value=0.013  Score=40.70  Aligned_cols=34  Identities=21%  Similarity=0.272  Sum_probs=29.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      +|.|+|+|| |--|+..|.+|+++|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999998 6889999999999999999997643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.03  E-value=0.077  Score=35.11  Aligned_cols=43  Identities=12%  Similarity=0.006  Sum_probs=36.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFAD   54 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   54 (167)
                      ....++|.|+ |-.|+.-++-...-|++|.+++.+.+.++++.+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            3467899998 689999999999999999999999888776654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.90  E-value=0.056  Score=33.71  Aligned_cols=35  Identities=14%  Similarity=0.213  Sum_probs=30.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ..|.++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            3678999988 7999999999999999999997754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.87  E-value=0.013  Score=38.51  Aligned_cols=33  Identities=24%  Similarity=0.373  Sum_probs=29.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~   45 (167)
                      +|.++|+|| |..|...|..|.++|++ |.++.+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEec
Confidence            577999998 79999999999999995 8888775

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.80  E-value=0.31  Score=32.39  Aligned_cols=75  Identities=15%  Similarity=0.121  Sum_probs=55.8

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .++|+++|=.|++.|.   ++..++.+|+ +|+.++.++..++.+.+.++. .+.+..++..|+.+.            .
T Consensus        44 dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~-~~~~~~~~~~d~~~~------------~  107 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGE-FKGKFKVFIGDVSEF------------N  107 (201)
T ss_dssp             SSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGG-GTTSEEEEESCGGGC------------C
T ss_pred             CCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHH-cCCCceEEECchhhh------------C
Confidence            3578999988887662   2333456776 899999999888888887776 777888888886432            2


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      .++|.+|.|+-.
T Consensus       108 ~~fD~Vi~nPP~  119 (201)
T d1wy7a1         108 SRVDIVIMNPPF  119 (201)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CcCcEEEEcCcc
Confidence            589999999854

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.77  E-value=0.16  Score=35.20  Aligned_cols=73  Identities=16%  Similarity=0.086  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++++|=.|+++|+   ++..+++.|++|+.++.++..++.+.+..+. .+.+..++..|+.          .....++.
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~-n~~~~~~~~~d~~----------~~~~~~~f  185 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKR-NGVRPRFLEGSLE----------AALPFGPF  185 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHH-TTCCCEEEESCHH----------HHGGGCCE
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHH-cCCceeEEecccc----------cccccccc
Confidence            57889999998886   2335667799999999999998888877765 5666666666541          11123689


Q ss_pred             cEEEEcC
Q 031016           91 EVLVYNA   97 (167)
Q Consensus        91 ~~lv~~a   97 (167)
                      |.++.|.
T Consensus       186 D~V~ani  192 (254)
T d2nxca1         186 DLLVANL  192 (254)
T ss_dssp             EEEEEEC
T ss_pred             chhhhcc
Confidence            9998774

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.69  E-value=0.031  Score=36.71  Aligned_cols=36  Identities=19%  Similarity=0.229  Sum_probs=32.9

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ++.||.++|.|-+.-+|+.++..|.++|++|.....
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~   61 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDV   61 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecc
Confidence            678999999999999999999999999999987654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.55  E-value=0.026  Score=38.68  Aligned_cols=35  Identities=23%  Similarity=0.232  Sum_probs=30.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ..+.|+|+|| |--|..+|..|+++|.+|+++.+++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3566999998 6889999999999999999998754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.52  E-value=0.12  Score=32.39  Aligned_cols=76  Identities=16%  Similarity=0.172  Sum_probs=51.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc-CCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE-GYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~-g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      .+.|.|++|.+|+.+++...+. ++.++.. ++... +..    +.. .+.+   +.+|+|.|+.....++.+.+. ++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~-~~~D---vvIDFS~p~~~~~~~~~~~~~-~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTD-GNTE---VVIDFTHPDVVMGNLEFLIDN-GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHT-TTCS---EEEECCCTTTHHHHHHHHHHT-TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hcc-ccCC---EEEEcccHHHHHHHHHHHHhc-CCC
Confidence            3789999999999999988774 5676554 44322 221    111 2333   457999999999888887633 355


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      .++-+-|.
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            67666665

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.44  E-value=0.018  Score=39.95  Aligned_cols=30  Identities=27%  Similarity=0.389  Sum_probs=27.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|+|| |-.|.++|.+|+++|.+|++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788887 799999999999999999999874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.39  E-value=0.058  Score=35.03  Aligned_cols=40  Identities=23%  Similarity=0.121  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR   48 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~   48 (167)
                      ..+.+|+++|.|= |.+|+.+|+++...|++|+++..+|-.
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            3467999999886 799999999999999999999988744

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.034  Score=41.87  Aligned_cols=33  Identities=18%  Similarity=0.459  Sum_probs=28.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      +..++|+|+ ||+|-.+++.|+..|. ++.+++.+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            456999999 6899999999999998 78888764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.14  Score=36.32  Aligned_cols=75  Identities=15%  Similarity=0.087  Sum_probs=50.2

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      .++|+||-.|++.|+   ++..+++.|+ +|+.++.++... ...+..... ...++.++..|+.+...         ..
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~~~~~i~~~~~~~~~l~~---------~~  100 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNKLEDTITLIKGKIEEVHL---------PV  100 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTTCTTTEEEEESCTTTSCC---------SC
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhCCCccceEEEeeHHHhcC---------cc
Confidence            468999999998775   5666777887 788888876543 333333321 34468888888765321         23


Q ss_pred             CCccEEEEcC
Q 031016           88 GFVEVLVYNA   97 (167)
Q Consensus        88 ~~i~~lv~~a   97 (167)
                      .++|++|...
T Consensus       101 ~~~D~Ivse~  110 (311)
T d2fyta1         101 EKVDVIISEW  110 (311)
T ss_dssp             SCEEEEEECC
T ss_pred             ccceEEEEee
Confidence            5789998754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.23  E-value=0.045  Score=36.62  Aligned_cols=37  Identities=16%  Similarity=0.189  Sum_probs=30.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      +.|.|. |-+|..+|..|+++|++|++.+.+++..+.+
T Consensus         3 I~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            455555 8999999999999999999999887665543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.23  E-value=0.11  Score=35.38  Aligned_cols=74  Identities=12%  Similarity=0.021  Sum_probs=54.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ..+++|=.|+++|   .++..|+++|++|+.++-+++-++.+.+.++. .+.++.+...|+.+-.     +     .+.+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~-~~~~i~~~~~d~~~l~-----~-----~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKE-RNLKIEFLQGDVLEIA-----F-----KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCCEEEESCGGGCC-----C-----CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccc-ccccchheehhhhhcc-----c-----cccc
Confidence            4578999999876   34567888999999999998877777777665 5667888888875432     0     1468


Q ss_pred             cEEEEcCC
Q 031016           91 EVLVYNAY   98 (167)
Q Consensus        91 ~~lv~~ag   98 (167)
                      |.+++.-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98887543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.15  E-value=0.065  Score=36.65  Aligned_cols=74  Identities=7%  Similarity=-0.092  Sum_probs=55.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++++|=.|+++|.   ++..|+++|.+|+.++.+++-++.+.+.++. .+.++.++..|+.+.+          ..+++
T Consensus        37 ~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~-~~~~v~~~~~d~~~~~----------~~~~f  102 (246)
T d1y8ca_          37 VFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRS-QGLKPRLACQDISNLN----------INRKF  102 (246)
T ss_dssp             CTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHH-TTCCCEEECCCGGGCC----------CSCCE
T ss_pred             CCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccc-cCccceeeccchhhhc----------ccccc
Confidence            46789999998775   6778889999999999998888777766665 5667888888875431          12478


Q ss_pred             cEEEEcCC
Q 031016           91 EVLVYNAY   98 (167)
Q Consensus        91 ~~lv~~ag   98 (167)
                      |.+++.-+
T Consensus       103 D~i~~~~~  110 (246)
T d1y8ca_         103 DLITCCLD  110 (246)
T ss_dssp             EEEEECTT
T ss_pred             cccceeee
Confidence            98886543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.08  E-value=0.11  Score=32.23  Aligned_cols=72  Identities=14%  Similarity=0.219  Sum_probs=52.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +.|.|++|.+|+.+++.+.++|+.++.. +++....      +   ...+   +.+|+|.|+...+.++.+.+. ++..+
T Consensus         3 i~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~---~~~D---VvIDFS~p~~~~~~l~~~~~~-~~p~V   69 (128)
T d1vm6a3           3 YGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L---DSPD---VVIDFSSPEALPKTVDLCKKY-RAGLV   69 (128)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C---SCCS---EEEECSCGGGHHHHHHHHHHH-TCEEE
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h---ccCC---EEEEecCHHHHHHHHHHHHhc-CCCEE
Confidence            7899999999999999888899987654 4433210      0   1223   356999999999999888733 35577


Q ss_pred             EEcCCC
Q 031016           94 VYNAYQ   99 (167)
Q Consensus        94 v~~ag~   99 (167)
                      +-+-|.
T Consensus        70 iGTTG~   75 (128)
T d1vm6a3          70 LGTTAL   75 (128)
T ss_dssp             ECCCSC
T ss_pred             EEcCCC
Confidence            766665

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.08  E-value=0.026  Score=39.71  Aligned_cols=35  Identities=29%  Similarity=0.227  Sum_probs=30.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ..|.|+|+|| |--|+..|.+|+++|++|.++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4678999999 6889999999999999999997654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.28  Score=32.99  Aligned_cols=43  Identities=16%  Similarity=0.018  Sum_probs=35.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEI   56 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   56 (167)
                      .++.+|..|++.|   ..+..|+++|++|+.++-++..++.+.+..
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            5678999999776   457788999999999999998877666553

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=93.91  E-value=0.027  Score=37.59  Aligned_cols=31  Identities=16%  Similarity=0.284  Sum_probs=26.9

Q ss_pred             cEEEEEcCCCchhHH-----HHHHHHHcCCeEEEEe
Q 031016           13 GIAAIVGVGPNLGRS-----IARKFAHEGYTVAILA   43 (167)
Q Consensus        13 ~~~lItGa~~~iG~~-----~a~~l~~~g~~v~~~~   43 (167)
                      |.++|||.++|+|+-     ++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999898874     6778889999998875

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.89  E-value=0.17  Score=35.82  Aligned_cols=24  Identities=33%  Similarity=0.450  Sum_probs=21.4

Q ss_pred             CchhHHHHHHHHHcCCeEEEEecC
Q 031016           22 PNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        22 ~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      |..|.++|+.++.+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            678999999999999999998653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.87  E-value=0.4  Score=29.97  Aligned_cols=86  Identities=12%  Similarity=0.133  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCC---CchhHHHHHHHHHcCCeEEEEecChhhHH--HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           11 CRGIAAIVGVG---PNLGRSIARKFAHEGYTVAILARDLGRLS--RFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        11 ~~~~~lItGa~---~~iG~~~a~~l~~~g~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ..|++.|+|++   +..|..+.+.|.+.|++|+.+........  .....++. ....+..+. =+..++.+..+++++.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~d-lp~~iD~v~-i~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLD-IPDKIEVVD-LFVKPKLTMEYVEQAI   95 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-CSSCCSEEE-ECSCHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccc-cCccceEEE-EEeCHHHHHHHHHHHH
Confidence            46899999998   68999999999999999988865432211  11112222 222222211 1245777788888877


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                      +.| +..++...|.
T Consensus        96 ~~g-~k~v~~~~G~  108 (139)
T d2d59a1          96 KKG-AKVVWFQYNT  108 (139)
T ss_dssp             HHT-CSEEEECTTC
T ss_pred             HhC-CCEEEEeccc
Confidence            333 4566666665

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.45  Score=30.23  Aligned_cols=51  Identities=16%  Similarity=0.218  Sum_probs=34.1

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVF   65 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~   65 (167)
                      |.+.|.|+||.||.....-..+.  .++|+.++-+.+ .+.+.+.+.. +..+..
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N-~~~L~~q~~~-f~pk~v   54 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN-VTRMVEQCLE-FSPRYA   54 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC-HHHHHHHHHH-HCCSEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc-HHHHHHHHHH-Hhhccc
Confidence            67999999999999999888775  468877754322 2344444444 444433

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.76  E-value=0.052  Score=34.53  Aligned_cols=35  Identities=11%  Similarity=0.264  Sum_probs=27.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLS   50 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~   50 (167)
                      +-|.|. |.+|.++++.|.++|++|++.++++.+..
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            345555 89999999999999999988877655433

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.61  E-value=0.53  Score=30.53  Aligned_cols=75  Identities=17%  Similarity=0.194  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC--CcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK--SQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .+.+++=.|++.|   .++..++.++.+|+.++.+++.++.+.+.++. .+  .++.++.+|.          .+.. ..
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~-~gl~~~v~~~~gda----------~~~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQR-HGLGDNVTLMEGDA----------PEALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHH-TTCCTTEEEEESCH----------HHHHTTS
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHH-cCCCcceEEEECch----------hhccccc
Confidence            4677887888765   23344566777999999999999988888876 43  4788888774          2222 34


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      +.+|.++.+...
T Consensus        99 ~~~D~v~~~~~~  110 (186)
T d1l3ia_          99 PDIDIAVVGGSG  110 (186)
T ss_dssp             CCEEEEEESCCT
T ss_pred             CCcCEEEEeCcc
Confidence            689999877643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.57  E-value=0.046  Score=34.98  Aligned_cols=35  Identities=14%  Similarity=0.153  Sum_probs=29.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC--eEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY--TVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~--~v~~~~r~~   46 (167)
                      .+|.++|+|| |-.|..+|..|.+++.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3799999999 6899999999999875  788886653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=93.56  E-value=0.034  Score=38.71  Aligned_cols=29  Identities=17%  Similarity=0.401  Sum_probs=26.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ++|+|| |-.|..+|.+|+++|++|+++.+
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~   34 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDA   34 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeC
Confidence            678887 78999999999999999999976

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.54  E-value=0.23  Score=32.86  Aligned_cols=75  Identities=12%  Similarity=0.059  Sum_probs=54.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +.++|=.|+++|.   ++..|++.|++|+.++-+++.++...+.+.. .+.++..+..|..+..         ...+.+|
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~-~~~~~~~~~~d~~~l~---------~~~~~fD  104 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKS-RESNVEFIVGDARKLS---------FEDKTFD  104 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTCCCEEEECCTTSCC---------SCTTCEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcc-cccccccccccccccc---------ccCcCce
Confidence            4568999998776   5567788899999999998888877776665 5566777777766422         0125789


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      +++.....
T Consensus       105 ~I~~~~~l  112 (226)
T d1ve3a1         105 YVIFIDSI  112 (226)
T ss_dssp             EEEEESCG
T ss_pred             EEEEecch
Confidence            98887654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.46  E-value=0.049  Score=39.02  Aligned_cols=35  Identities=29%  Similarity=0.302  Sum_probs=29.8

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ++|.++|+|| |--|...|..|+++|++|.++..++
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3678999998 6889999999999999999997643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.43  E-value=0.075  Score=36.09  Aligned_cols=34  Identities=29%  Similarity=0.402  Sum_probs=30.5

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ..|.++|+|| |..|...|..|+++|++|.++.++
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeec
Confidence            5788999999 688999999999999999999764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.32  E-value=0.06  Score=33.45  Aligned_cols=77  Identities=16%  Similarity=0.170  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCC----------chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016           11 CRGIAAIVGVGP----------NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        11 ~~~~~lItGa~~----------~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      ..|.++|.|++.          .-+...++.|.+.|++++++..|++....-.+     ...++.+-  .+ ..+.+.++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-----~aD~lYfe--Pl-t~e~v~~I   77 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-----MADATYIE--PI-HWEVVRKI   77 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-----GSSEEECS--CC-CHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-----hcceeeee--cC-CHHHHHHH
Confidence            468899999852          34667888899999999999888765321111     12233332  23 35778777


Q ss_pred             HHHHHhcCCccEEEEcCCC
Q 031016           81 FEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~   99 (167)
                      ++.-    ++|.++...|.
T Consensus        78 i~~E----~pd~il~~~GG   92 (127)
T d1a9xa3          78 IEKE----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHH----CCSEEECSSSH
T ss_pred             HHHh----CcCCeEEEeee
Confidence            7764    78999888776

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.28  E-value=0.2  Score=30.18  Aligned_cols=34  Identities=18%  Similarity=0.061  Sum_probs=26.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHH---cCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAH---EGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~---~g~~v~~~~r~~   46 (167)
                      .+.++|.|+ |.+|.++|..|.+   +|.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999998 7999999976665   456798887753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.19  E-value=0.29  Score=28.55  Aligned_cols=74  Identities=15%  Similarity=0.201  Sum_probs=46.4

Q ss_pred             CCCCCCCcEEEEEcCCCchh-HHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016            6 SSGSSCRGIAAIVGVGPNLG-RSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus         6 ~~~~~~~~~~lItGa~~~iG-~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      +.+. +.|.+.+.|- +|+| .++|+.|.++|++|...++......+   .+.. .+..+.  ..+  +++.+       
T Consensus         3 ~~~~-~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~---~L~~-~Gi~v~--~g~--~~~~i-------   65 (96)
T d1p3da1           3 PEMR-RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQ---RLAQ-AGAKIY--IGH--AEEHI-------   65 (96)
T ss_dssp             CCCT-TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHH---HHHH-TTCEEE--ESC--CGGGG-------
T ss_pred             ccch-hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhh---HHHH-CCCeEE--ECC--ccccC-------
Confidence            4443 4577888887 4666 55699999999999999887554332   2323 344322  211  12211       


Q ss_pred             HhcCCccEEEEcCCC
Q 031016           85 LSLGFVEVLVYNAYQ   99 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~   99 (167)
                         ...|.+|...++
T Consensus        66 ---~~~d~vV~S~AI   77 (96)
T d1p3da1          66 ---EGASVVVVSSAI   77 (96)
T ss_dssp             ---TTCSEEEECTTS
T ss_pred             ---CCCCEEEECCCc
Confidence               357999999987

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.19  E-value=0.16  Score=33.95  Aligned_cols=70  Identities=16%  Similarity=0.061  Sum_probs=49.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.||+++=.|+++|+   ++..++..|+ +|+.++.++..++...+.     -.++.++.+|+.+.            .+
T Consensus        47 l~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N-----~~~~~~~~~D~~~l------------~~  106 (197)
T d1ne2a_          47 IGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN-----CGGVNFMVADVSEI------------SG  106 (197)
T ss_dssp             SBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH-----CTTSEEEECCGGGC------------CC
T ss_pred             CCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc-----cccccEEEEehhhc------------CC
Confidence            579999999998773   3344666776 699999888766554443     34577888887432            26


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|.+|.|+-+
T Consensus       107 ~fD~Vi~NPPf  117 (197)
T d1ne2a_         107 KYDTWIMNPPF  117 (197)
T ss_dssp             CEEEEEECCCC
T ss_pred             cceEEEeCccc
Confidence            89999999854

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.17  E-value=0.046  Score=35.95  Aligned_cols=32  Identities=19%  Similarity=0.450  Sum_probs=27.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      +.|.|+ |..|.++|..|++.|.+|.+.+|+.+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            567787 79999999999999999999988543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.11  E-value=0.4  Score=31.32  Aligned_cols=76  Identities=16%  Similarity=0.185  Sum_probs=52.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .++.+|=.|++.|.   .+..|+++|++|+.++-+++.++...+......-..+.+...|+.+..     .     .+.+
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~~f   96 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----F-----DGEY   96 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----C-----CCCE
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----c-----cccc
Confidence            45578989986443   456778899999999999888887766665522235777777776542     0     1467


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++.+.-+
T Consensus        97 D~I~~~~~~  105 (198)
T d2i6ga1          97 DFILSTVVM  105 (198)
T ss_dssp             EEEEEESCG
T ss_pred             cEEEEeeee
Confidence            888766544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.02  E-value=0.063  Score=35.73  Aligned_cols=30  Identities=10%  Similarity=0.175  Sum_probs=26.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      |+|+|| |--|...|..|+++|.+|.++.++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~   37 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQ   37 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCC
Confidence            788886 688999999999999999999775

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.00  E-value=0.49  Score=28.37  Aligned_cols=81  Identities=15%  Similarity=0.167  Sum_probs=53.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      ||.+||+-....+...+...|-+.|++|+....+....-+   .+++ ...++.+...++-+.+.+ +++++++ ..+.+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~---~~~~-~~~dliilD~~mp~~~G~-e~~~~ir~~~~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVE---KYKE-LKPDIVTMDITMPEMNGI-DAIKEIMKIDPNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHH---HHHH-HCCSEEEEECSCGGGCHH-HHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHH---HHHh-ccCCEEEEecCCCCCCHH-HHHHHHHHhCCCC
Confidence            6889999998888888888888899998766665543333   3333 444666665555444333 4556666 55667


Q ss_pred             cEEEEcC
Q 031016           91 EVLVYNA   97 (167)
Q Consensus        91 ~~lv~~a   97 (167)
                      .+++.++
T Consensus        76 pvi~ls~   82 (118)
T d1u0sy_          76 KIIVCSA   82 (118)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEc
Confidence            7777765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.83  E-value=0.22  Score=31.67  Aligned_cols=54  Identities=19%  Similarity=0.302  Sum_probs=36.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHc--CCeEEEEecChhhHHHHHHHHHhhcCCcEEEE
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHE--GYTVAILARDLGRLSRFADEIAREEKSQVFAI   67 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~   67 (167)
                      .|.+.|.|+||.||.....-+.+.  .++|+.++-+. ..+.+.+.+.. +..+..++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~e-f~Pk~v~i   57 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKR-TNAKRAVI   57 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHH-TTCSEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHh-hcccccee
Confidence            488999999999999998888764  47887775432 23444444444 55554433

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.80  E-value=0.33  Score=30.68  Aligned_cols=82  Identities=21%  Similarity=0.206  Sum_probs=51.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhc-----CCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREE-----KSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      +-+.|. |-+|..++++|++.|+.+ +..|+.++..+..+......     -.+...+...+.+.+.+......+. ...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            456666 899999999999988755 56777776666655543210     1122233345556677777777776 445


Q ss_pred             CccEEEEcCC
Q 031016           89 FVEVLVYNAY   98 (167)
Q Consensus        89 ~i~~lv~~ag   98 (167)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5556655553

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.67  E-value=0.054  Score=38.07  Aligned_cols=30  Identities=20%  Similarity=0.550  Sum_probs=26.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~   45 (167)
                      |+|+|| |-+|.++|.+|+++|. +|.+++++
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            888888 6999999999999997 69999765

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.54  E-value=0.6  Score=29.59  Aligned_cols=82  Identities=12%  Similarity=0.067  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecC---CHHHHHHHHHHHHhc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCS---DSRSVREAFEGVLSL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~   87 (167)
                      +|+.+.|.+.+||.|.-++..+.+.|.++.-  -+++..+++.+.+..   .-..--.+|++   +++.+.++++.+.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~lp~---~~~~~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFLPP---MAAVKNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHSCT---TCEESSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhCCC---cccCCCcccccCCCCHHHHHHHHHHHHcC
Confidence            4788888889999999999999998866532  233444444444322   11122344554   566777777766667


Q ss_pred             CCccEEEEcC
Q 031016           88 GFVEVLVYNA   97 (167)
Q Consensus        88 ~~i~~lv~~a   97 (167)
                      +.+|.++...
T Consensus        77 ~~vd~v~v~~   86 (163)
T d2csua3          77 PNVDMLIAIC   86 (163)
T ss_dssp             TTCSEEEEEE
T ss_pred             CCcCEEEEee
Confidence            7899776544

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.32  E-value=0.42  Score=33.89  Aligned_cols=74  Identities=12%  Similarity=0.057  Sum_probs=49.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++|+||-.|++.|+   ++..++++|+ +|+.++.++. .....+..+.. ...++.++..|+.+.+.         ...
T Consensus        33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~---------~~~   99 (316)
T d1oria_          33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL---------PVE   99 (316)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC---------SSS
T ss_pred             CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc---------ccc
Confidence            68999999998875   4566777887 6888887654 44444444331 34468888888765321         235


Q ss_pred             CccEEEEcC
Q 031016           89 FVEVLVYNA   97 (167)
Q Consensus        89 ~i~~lv~~a   97 (167)
                      ++|+++...
T Consensus       100 ~~D~ivs~~  108 (316)
T d1oria_         100 KVDIIISEW  108 (316)
T ss_dssp             CEEEEEECC
T ss_pred             eeEEEeeee
Confidence            788888754

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.29  E-value=0.56  Score=31.63  Aligned_cols=80  Identities=10%  Similarity=-0.029  Sum_probs=58.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh-----cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE-----EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .+..+|-.|+++|.-.++.-++.....+|+.++++++-.+...+.++..     ...++.+...|..+..         .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~---------~  146 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---------A  146 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC---------G
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc---------c
Confidence            4678999999999888877778777779999999998888777776542     1235666766764211         1


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                      ..+++|.++.+++.
T Consensus       147 ~~~~fD~I~~~~~~  160 (224)
T d1i1na_         147 EEAPYDAIHVGAAA  160 (224)
T ss_dssp             GGCCEEEEEECSBB
T ss_pred             hhhhhhhhhhhcch
Confidence            23689999999876

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.26  E-value=0.25  Score=28.43  Aligned_cols=66  Identities=11%  Similarity=0.065  Sum_probs=42.9

Q ss_pred             EEEEcCCCchhH-HHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEE
Q 031016           15 AAIVGVGPNLGR-SIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVL   93 (167)
Q Consensus        15 ~lItGa~~~iG~-~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~l   93 (167)
                      +.+.|- +|+|. ++|+.|.++|+.|...++.+....+   .|+. .+.++.. .-|   ++.          ....|.+
T Consensus         4 ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~-~Gi~i~~-gh~---~~~----------i~~~d~v   64 (89)
T d1j6ua1           4 IHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRK-LGIPIFV-PHS---ADN----------WYDPDLV   64 (89)
T ss_dssp             EEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHH-TTCCEES-SCC---TTS----------CCCCSEE
T ss_pred             EEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHH-CCCeEEe-eec---ccc----------cCCCCEE
Confidence            445555 67887 7899999999999999987654333   3444 4544421 111   111          1358999


Q ss_pred             EEcCCC
Q 031016           94 VYNAYQ   99 (167)
Q Consensus        94 v~~ag~   99 (167)
                      |...++
T Consensus        65 V~SsAI   70 (89)
T d1j6ua1          65 IKTPAV   70 (89)
T ss_dssp             EECTTC
T ss_pred             EEecCc
Confidence            999988

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.19  E-value=0.34  Score=29.00  Aligned_cols=34  Identities=24%  Similarity=0.129  Sum_probs=27.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHH---cCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAH---EGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~---~g~~v~~~~r~~   46 (167)
                      .|.++|.|+ |.+|.++|..|.+   .|.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            578999998 6999999987665   488999987754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=92.03  E-value=0.55  Score=31.15  Aligned_cols=76  Identities=14%  Similarity=-0.028  Sum_probs=51.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCcc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVE   91 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~   91 (167)
                      +..+|=.|++.|.-   +..++++|++|+.++-+++.++...+.+......++.++..|..+.. +        ..+.+|
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~--------~~~~fD   83 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-F--------TDERFH   83 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-S--------CTTCEE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-c--------cccccc
Confidence            57789999887743   45678889999999999887777666665433456777777765431 0        124567


Q ss_pred             EEEEcCCC
Q 031016           92 VLVYNAYQ   99 (167)
Q Consensus        92 ~lv~~ag~   99 (167)
                      .++.....
T Consensus        84 ~v~~~~~l   91 (231)
T d1vl5a_          84 IVTCRIAA   91 (231)
T ss_dssp             EEEEESCG
T ss_pred             cccccccc
Confidence            66666554

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.03  E-value=0.086  Score=36.77  Aligned_cols=35  Identities=23%  Similarity=0.235  Sum_probs=30.7

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ++++|+++|-| .|.+|..+++.|.+.|++|+.++.
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            46799999998 589999999999999999987743

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=91.83  E-value=1.2  Score=31.00  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=50.6

Q ss_pred             cEEEEEcCCCc-hhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC--cEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           13 GIAAIVGVGPN-LGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS--QVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        13 ~~~lItGa~~~-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      ++++-.|+++| |+.+++ +  ...++|++++-++..+.-+.+..+. .+.  ++.+...|+.+.         .. ..+
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~-~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAER-HGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHH-TTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHH-cCCCceeEEeecccccc---------cccccC
Confidence            45665666555 444443 2  2457899999999988888777766 333  567777787643         22 347


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      ++|++|.|+-.
T Consensus       179 ~fDlIVsNPPY  189 (271)
T d1nv8a_         179 SIEMILSNPPY  189 (271)
T ss_dssp             TCCEEEECCCC
T ss_pred             cccEEEEcccc
Confidence            89999999976

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.76  E-value=0.98  Score=28.99  Aligned_cols=120  Identities=14%  Similarity=0.119  Sum_probs=63.4

Q ss_pred             EEEEEcCCCchhHHHHHHHHHc-----CCeEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           14 IAAIVGVGPNLGRSIARKFAHE-----GYTVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~-----g~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .+.|.||++.....+...++.+     +.++++++.++++++...+.++..   .+........  +|   .++.+    
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal----   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF----   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH----
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhcc----
Confidence            4667787554333344444432     237999999988876444444321   2333333221  12   22222    


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhh----------------HHHHHHHHHHHHhhHhcC-CceEEE
Q 031016           86 SLGFVEVLVYNAYQPVSWQPTNFTEISFDSFQKSIAISS----------------LGAFLCAQQVLSGMVERG-KGTIIF  148 (167)
Q Consensus        86 ~~~~i~~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~~~~~~-~g~iv~  148 (167)
                        ..-|++|+++|.   . ..     ...+-++.+..|+                ....-.++.+.+.+.+.. .+-+++
T Consensus        76 --~~AD~Vvitag~---~-~~-----~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~  144 (167)
T d1u8xx1          76 --TDVDFVMAHIRV---G-KY-----AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLN  144 (167)
T ss_dssp             --SSCSEEEECCCT---T-HH-----HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             --CCCCEEEECCCc---C-CC-----CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEE
Confidence              357999999987   1 11     1233334444442                223445567777777655 467777


Q ss_pred             ecCCc
Q 031016          149 TGCSA  153 (167)
Q Consensus       149 iss~~  153 (167)
                      +|-.+
T Consensus       145 ~TNPv  149 (167)
T d1u8xx1         145 YSNPA  149 (167)
T ss_dssp             CCSCH
T ss_pred             eCCHH
Confidence            76543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.73  E-value=0.17  Score=35.96  Aligned_cols=36  Identities=17%  Similarity=0.123  Sum_probs=31.5

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      .++++|+++|-|- |.+|..+|+.|.+.|++|+.++.
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            3568999999887 79999999999999999988754

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.70  E-value=0.99  Score=28.90  Aligned_cols=77  Identities=13%  Similarity=0.107  Sum_probs=47.6

Q ss_pred             CCcEEEEEcCC-CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcC
Q 031016           11 CRGIAAIVGVG-PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLG   88 (167)
Q Consensus        11 ~~~~~lItGa~-~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   88 (167)
                      .++.+|=.+++ |.+|    -..+.+|++|+.++.++...+.+.+.++. .+.+..+...|   .+..   +.... ...
T Consensus        41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~-~~~~~~v~~~~---~d~~---~~~~~~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRR-TGLGARVVALP---VEVF---LPEAKAQGE  109 (171)
T ss_dssp             TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHH-HTCCCEEECSC---HHHH---HHHHHHTTC
T ss_pred             CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHh-hccccceeeee---hhcc---cccccccCC
Confidence            45666655554 4444    35667799999999999888888777765 44443333322   2222   23333 346


Q ss_pred             CccEEEEcCC
Q 031016           89 FVEVLVYNAY   98 (167)
Q Consensus        89 ~i~~lv~~ag   98 (167)
                      ++|+++.++-
T Consensus       110 ~fD~If~DPP  119 (171)
T d1ws6a1         110 RFTVAFMAPP  119 (171)
T ss_dssp             CEEEEEECCC
T ss_pred             ccceeEEccc
Confidence            8999998873

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.65  E-value=0.29  Score=31.10  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=27.7

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCe-EEEEecC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYT-VAILARD   45 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~-v~~~~r~   45 (167)
                      .++.++|.|| |..|...|..+.++|++ |+++.|.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            4566888877 79999999999999984 7777774

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.60  E-value=0.13  Score=35.48  Aligned_cols=35  Identities=26%  Similarity=0.183  Sum_probs=30.6

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ++++|+++|-| .|.+|..+|+.|.+.|++|+.++.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            46799999997 489999999999999999987753

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.56  E-value=0.076  Score=36.97  Aligned_cols=33  Identities=24%  Similarity=0.316  Sum_probs=29.1

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~   47 (167)
                      .|+|+|| |-.|+.+|..|.++|.+|.++.+.++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3899998 59999999999999999999988653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.30  E-value=1.7  Score=30.78  Aligned_cols=78  Identities=12%  Similarity=-0.023  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCC-CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcC-CcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           11 CRGIAAIVGVG-PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEK-SQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        11 ~~~~~lItGa~-~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      +++++|=.++. |+++.++    +..+++|+.++.++..++.+.+.++. .+ .++.++..|..+.      .+... ..
T Consensus       145 ~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~-ngl~~~~~i~~d~~~~------~~~~~~~~  213 (318)
T d1wxxa2         145 RGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARL-NGLGNVRVLEANAFDL------LRRLEKEG  213 (318)
T ss_dssp             CEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHH-TTCTTEEEEESCHHHH------HHHHHHTT
T ss_pred             CCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHH-cCCCCcceeeccHHHH------hhhhHhhh
Confidence            57788866665 5554443    34466899999999998888888776 44 3678887776432      22333 34


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      .++|.+|.++..
T Consensus       214 ~~fD~Vi~DpP~  225 (318)
T d1wxxa2         214 ERFDLVVLDPPA  225 (318)
T ss_dssp             CCEEEEEECCCC
T ss_pred             cCCCEEEEcCCc
Confidence            689999998854

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.25  E-value=0.7  Score=31.21  Aligned_cols=75  Identities=11%  Similarity=-0.117  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      .+..+|-+|+++|.-.+   .|++.+.+|+.+..+++..+...+.+..  ..++.++..|.....         .+.+++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~--~~nv~~~~~d~~~g~---------~~~~pf  135 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY--YNNIKLILGDGTLGY---------EEEKPY  135 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT--CSSEEEEESCGGGCC---------GGGCCE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc--ccccccccCchhhcc---------hhhhhH
Confidence            46789999998875443   4555567899999988877766665543  357888888874310         123689


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |.++.+++.
T Consensus       136 D~Iiv~~a~  144 (224)
T d1vbfa_         136 DRVVVWATA  144 (224)
T ss_dssp             EEEEESSBB
T ss_pred             HHHHhhcch
Confidence            999988876

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.14  E-value=0.11  Score=35.30  Aligned_cols=31  Identities=26%  Similarity=0.247  Sum_probs=27.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ++|+|| |--|...|..|+++|++|+++.+++
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788888 6899999999999999999998754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.56  E-value=0.14  Score=32.93  Aligned_cols=31  Identities=23%  Similarity=0.239  Sum_probs=25.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL   42 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~   42 (167)
                      +++.++|.|+ |.+|.+++..|.+.|+++.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4677899988 799999999999999865443

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.53  E-value=0.15  Score=31.22  Aligned_cols=77  Identities=13%  Similarity=0.092  Sum_probs=49.7

Q ss_pred             CCcEEEEEcCCC----------chhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHH
Q 031016           11 CRGIAAIVGVGP----------NLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        11 ~~~~~lItGa~~----------~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      ..|.++|.|++.          .-+...++.|-+.|++++++..|++....-.+     ...++.+-  .+ ..+.+.++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d-----~aD~lYfe--pl-t~e~v~~I   74 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD-----TSDRLYFE--PV-TLEDVLEI   74 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT-----SSSEEECC--CC-SHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh-----hcCceEEc--cC-CHHHHHHH
Confidence            457899999853          44667888999999999999888765321100     12222222  33 35667766


Q ss_pred             HHHHHhcCCccEEEEcCCC
Q 031016           81 FEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~   99 (167)
                      ++.-    ++|.++...|.
T Consensus        75 i~~E----~p~~ii~~~GG   89 (121)
T d1a9xa4          75 VRIE----KPKGVIVQYGG   89 (121)
T ss_dssp             HHHH----CCSEEECSSST
T ss_pred             HHHh----CCCEEEeehhh
Confidence            6653    67888877775

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=90.42  E-value=0.11  Score=35.50  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=27.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      |+|+|| |--|...|.+|+++|++|.++.+++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            788888 6889999999999999999997653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.27  E-value=0.18  Score=35.39  Aligned_cols=44  Identities=16%  Similarity=0.068  Sum_probs=33.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAR   58 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~   58 (167)
                      ++.+|=.|++.|.   ++..|+++|++|+.++.+++-++.+.+....
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~  100 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWN  100 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHh
Confidence            5788999987665   4566778899999999998877766655543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.26  E-value=0.18  Score=34.97  Aligned_cols=33  Identities=27%  Similarity=0.382  Sum_probs=27.7

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      .+.|+|+|| |--|+..|..|.++|++|.++..+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            455899998 678899999999999999998543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.20  E-value=0.2  Score=33.51  Aligned_cols=34  Identities=21%  Similarity=0.299  Sum_probs=28.8

Q ss_pred             CcEEEEEcCCCchhHH-----HHHHHHHcCCeEEEEecC
Q 031016           12 RGIAAIVGVGPNLGRS-----IARKFAHEGYTVAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~-----~a~~l~~~g~~v~~~~r~   45 (167)
                      +|++.|+++-||.|+.     +|..|+++|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999998875     677888999999999754

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.12  E-value=0.98  Score=34.43  Aligned_cols=73  Identities=8%  Similarity=0.114  Sum_probs=50.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      .+..++++++|..|.+.+..+... +-+|+++.-+..-.+-..+.+.+..+.+++.+.+| .+-++.+++++++.
T Consensus       151 ~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~~f  224 (511)
T d1kl7a_         151 KQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKAIF  224 (511)
T ss_dssp             CCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHHHH
T ss_pred             ceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHHHH
Confidence            455666777799999999999864 56787775543221112233333245689999998 46889999999987

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.86  E-value=0.12  Score=30.71  Aligned_cols=38  Identities=8%  Similarity=-0.072  Sum_probs=30.9

Q ss_pred             CCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016            8 GSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus         8 ~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ..+++|.++|.|++ .=|..+|..|+..+.+++...|..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            34689999999994 788999999999888877776644

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=89.78  E-value=0.16  Score=35.62  Aligned_cols=30  Identities=23%  Similarity=0.355  Sum_probs=26.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|+|+ |..|...|..++++|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            788887 799999999999999999998753

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.55  E-value=1.3  Score=26.55  Aligned_cols=84  Identities=13%  Similarity=0.201  Sum_probs=49.4

Q ss_pred             cEEEEEcCC---CchhHHHHHHHHHcCCeEEEEecChhhHH--HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           13 GIAAIVGVG---PNLGRSIARKFAHEGYTVAILARDLGRLS--RFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        13 ~~~lItGa~---~~iG~~~a~~l~~~g~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      |++.|.|++   +..|..+.+.|.+.|++|+.+..+.+...  ...+.+.. .+..+... .=+..++.+..+++++...
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~-lp~~~D~v-vi~vp~~~~~~~l~~~~~~   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRE-LPKDVDVI-VFVVPPKVGLQVAKEAVEA   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-SCTTCCEE-EECSCHHHHHHHHHHHHHT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchh-ccccceEE-EEEeCHHHHHHHHHHHHhc
Confidence            678999998   67899999999999999888754332211  11111222 22222222 1234566677777777633


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      | +..++...|.
T Consensus        80 g-~k~v~~~~g~   90 (116)
T d1y81a1          80 G-FKKLWFQPGA   90 (116)
T ss_dssp             T-CCEEEECTTS
T ss_pred             C-CceEEeccch
Confidence            3 4455555544

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.46  E-value=0.16  Score=35.78  Aligned_cols=31  Identities=19%  Similarity=0.214  Sum_probs=27.0

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      -++|+|| |--|..+|++|+++|.+|.++.++
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~   33 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKR   33 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECC
Confidence            3788888 688999999999999999999654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.35  E-value=0.18  Score=34.41  Aligned_cols=33  Identities=21%  Similarity=0.256  Sum_probs=28.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGR   48 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~   48 (167)
                      ++|+|| |.-|...|..|+++|.+|+++.+++..
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            788888 688999999999999999999887644

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.34  E-value=0.24  Score=34.14  Aligned_cols=37  Identities=16%  Similarity=0.208  Sum_probs=30.1

Q ss_pred             CCcEEEEEcCCCchhHHH-----HHHHHHcCCeEEEEecChh
Q 031016           11 CRGIAAIVGVGPNLGRSI-----ARKFAHEGYTVAILARDLG   47 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~-----a~~l~~~g~~v~~~~r~~~   47 (167)
                      .++.++|+.|=||+|+..     +..|+++|++|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            456677777799999876     7899999999999987754

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=89.28  E-value=1.2  Score=33.19  Aligned_cols=72  Identities=13%  Similarity=0.116  Sum_probs=49.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC-CeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG-YTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      ++..+++.+||..|.+.+..+...+ -+++++.-+..-...-.+.+.. .+.+++.+.+| .+-++.+++++++.
T Consensus       125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~~Qmtt-~g~nv~vi~V~-G~fDDcq~lvk~~f  197 (428)
T d1vb3a1         125 KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCT-LGGNIETVAID-GDFDACQALVKQAF  197 (428)
T ss_dssp             CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHS-CCTTEEEEEEE-SCHHHHHHHHHHGG
T ss_pred             ccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHHHHHhh-ccCCceEEecC-CChhHHHHHHHHHh
Confidence            4566778888999999999999875 4776664432111111123334 67788888888 45788888888885

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.20  E-value=0.56  Score=31.97  Aligned_cols=34  Identities=21%  Similarity=0.234  Sum_probs=28.5

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHH-cCCeEEEEe
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAH-EGYTVAILA   43 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~-~g~~v~~~~   43 (167)
                      ++++++++|-| .|.+|..+++.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            46789988876 58999999999985 599988775

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.05  E-value=1.5  Score=28.55  Aligned_cols=72  Identities=11%  Similarity=0.049  Sum_probs=47.5

Q ss_pred             cCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEEEcCC
Q 031016           19 GVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAY   98 (167)
Q Consensus        19 Ga~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv~~ag   98 (167)
                      -+|-|-|-. .+.+++++.+|++++++++.+....+.    ...++.++..++++-+   +.+... ..+++|+++.--|
T Consensus        24 D~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~----~~~~~~~~~~~f~~~~---~~l~~~-~~~~vdgIl~DLG   94 (182)
T d1wg8a2          24 DATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL----HLPGLTVVQGNFRHLK---RHLAAL-GVERVDGILADLG   94 (182)
T ss_dssp             ETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT----CCTTEEEEESCGGGHH---HHHHHT-TCSCEEEEEEECS
T ss_pred             EeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc----cccceeEeehHHHHHH---HHHHHc-CCCccCEEEEEcc
Confidence            344333433 455566677999999999876655432    4457889988887643   333332 2368999999998


Q ss_pred             C
Q 031016           99 Q   99 (167)
Q Consensus        99 ~   99 (167)
                      +
T Consensus        95 v   95 (182)
T d1wg8a2          95 V   95 (182)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.84  E-value=0.16  Score=35.82  Aligned_cols=33  Identities=18%  Similarity=0.335  Sum_probs=23.3

Q ss_pred             cEEEEEcCCCch---hHHHHHHHHHcCCeEEEEecC
Q 031016           13 GIAAIVGVGPNL---GRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        13 ~~~lItGa~~~i---G~~~a~~l~~~g~~v~~~~r~   45 (167)
                      |+++.|||+||-   +.+++++|.++|++|..++..
T Consensus         2 kili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           2 RLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             EEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            334444444565   678999999999999877654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.83  E-value=0.32  Score=30.01  Aligned_cols=88  Identities=11%  Similarity=0.037  Sum_probs=52.8

Q ss_pred             CCCcEEEEEcCC---CchhHHHHHHHHHcC-CeEEEEecChhhHH--HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVG---PNLGRSIARKFAHEG-YTVAILARDLGRLS--RFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus        10 ~~~~~~lItGa~---~~iG~~~a~~l~~~g-~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      +..|++.|+|++   +.+|..+.+.|.+.| ++|+.+..+.+...  +....++. .+..+.... =+..++.+.+++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~d-lp~~vDlvv-i~vp~~~~~~~~~~   83 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKD-IPDEIDLAI-IVVPKRFVKDTLIQ   83 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTS-CSSCCSEEE-ECSCHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhh-cCCCCceEE-EecChHHhHHHHHH
Confidence            356899999998   889999999987765 58887755432211  11112222 222222221 12357778888888


Q ss_pred             HHhcCCccEEEEcCCC
Q 031016           84 VLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~   99 (167)
                      +.+.|--.+++..+|+
T Consensus        84 ~~~~g~~~~vi~s~Gf   99 (129)
T d2csua1          84 CGEKGVKGVVIITAGF   99 (129)
T ss_dssp             HHHHTCCEEEECCCSS
T ss_pred             HHHcCCCEEEEecccc
Confidence            8744544566667766

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.83  E-value=0.35  Score=30.53  Aligned_cols=32  Identities=9%  Similarity=0.206  Sum_probs=24.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcC----CeEEEEec
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEG----YTVAILAR   44 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g----~~v~~~~r   44 (167)
                      |.+.|.||||-.|+.+.+.|+++.    .++.+..+
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~s   37 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFST   37 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeec
Confidence            468899999999999999888753    25665544

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=88.74  E-value=1.8  Score=27.95  Aligned_cols=63  Identities=8%  Similarity=0.051  Sum_probs=49.7

Q ss_pred             HcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEEEcCCC
Q 031016           34 HEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        34 ~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv~~ag~   99 (167)
                      .+|-++++.+.+....+++.+.+.. .+-+...+..++.+.+ -+++++... .|.+++||++--.
T Consensus        29 ~~g~r~lvfc~t~~~~~~l~~~L~~-~Gi~a~~~Hg~~~~~e-R~~~l~~F~-~G~~~vLVaT~v~   91 (174)
T d1c4oa2          29 ARGERTLVTVLTVRMAEELTSFLVE-HGIRARYLHHELDAFK-RQALIRDLR-LGHYDCLVGINLL   91 (174)
T ss_dssp             HTTCEEEEECSSHHHHHHHHHHHHH-TTCCEEEECTTCCHHH-HHHHHHHHH-TTSCSEEEESCCC
T ss_pred             hcCCcEEEEEcchhHHHHHHHHHHh-cCCceEEEecccchHH-HHHHHHHHH-CCCeEEEEeeeee
Confidence            4688999999999999999999988 8888999999987543 445555443 4889999998754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.71  E-value=0.2  Score=33.24  Aligned_cols=31  Identities=26%  Similarity=0.360  Sum_probs=26.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~   46 (167)
                      |+|+|| |--|+..|..|.++|. +|.++.+++
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           3 VIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            788888 6889999999999997 699987653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.49  E-value=0.31  Score=37.44  Aligned_cols=33  Identities=12%  Similarity=0.272  Sum_probs=27.9

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEec
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILAR   44 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r   44 (167)
                      .+..++|.|+ ||+|..+++-|+..|. ++.+++.
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            3567899997 7999999999999996 7888765

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.43  E-value=1.6  Score=29.24  Aligned_cols=80  Identities=10%  Similarity=0.077  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHH-cC----CeEEEEecChhhHHHHHHHHHhh-----cCCcEEEEEeecCCHHHHHHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAH-EG----YTVAILARDLGRLSRFADEIARE-----EKSQVFAIRIDCSDSRSVREA   80 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~-~g----~~v~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~   80 (167)
                      .+..+|.+|+++|.-.++.-+++. .|    .+|+.+.++++-.+...+.+...     ...++.++..|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            467899999988877777777664 45    48999999887666554443321     2346888888875311     


Q ss_pred             HHHHHhcCCccEEEEcCCC
Q 031016           81 FEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        81 ~~~~~~~~~i~~lv~~ag~   99 (167)
                          ...+++|.++.+++.
T Consensus       155 ----~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         155 ----PPNAPYNAIHVGAAA  169 (223)
T ss_dssp             ----GGGCSEEEEEECSCB
T ss_pred             ----ccccceeeEEEEeec
Confidence                134689999998876

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.36  E-value=0.91  Score=27.86  Aligned_cols=34  Identities=24%  Similarity=0.206  Sum_probs=27.1

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHH----cCCeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAH----EGYTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~----~g~~v~~~~r~~   46 (167)
                      .|.++|.|| |.+|.++|..|.+    .|.+|.++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            578888888 7999999988863    588998887643

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=88.32  E-value=0.66  Score=32.41  Aligned_cols=74  Identities=11%  Similarity=0.040  Sum_probs=53.0

Q ss_pred             cEEEEEcCC-CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCC-cEEEEEeecCCHHHHHHHHHHHHhcCCc
Q 031016           13 GIAAIVGVG-PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKS-QVFAIRIDCSDSRSVREAFEGVLSLGFV   90 (167)
Q Consensus        13 ~~~lItGa~-~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~i   90 (167)
                      ..++=.|++ |-||.+++...-  .++|++++-++..++.+.+..+. .+. ++.++..|+.++-          ...++
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~p--~~~v~avDis~~Al~~A~~Na~~-~~~~~v~~~~~d~~~~~----------~~~~f  176 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASERP--DCEIIAVDRMPDAVSLAQRNAQH-LAIKNIHILQSDWFSAL----------AGQQF  176 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHCT--TSEEEEECSSHHHHHHHHHHHHH-HTCCSEEEECCSTTGGG----------TTCCE
T ss_pred             cceeeeehhhhHHHHHHHhhCC--cceeeeccchhHHHhHHHHHHHH-hCcccceeeeccccccc----------CCCce
Confidence            345555654 566666666543  36899999999988888887776 443 6999999986541          12589


Q ss_pred             cEEEEcCCC
Q 031016           91 EVLVYNAYQ   99 (167)
Q Consensus        91 ~~lv~~ag~   99 (167)
                      |++|.|+-.
T Consensus       177 DlIvsNPPY  185 (274)
T d2b3ta1         177 AMIVSNPPY  185 (274)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEecchh
Confidence            999999965

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.20  E-value=0.24  Score=34.74  Aligned_cols=30  Identities=23%  Similarity=0.338  Sum_probs=25.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|+|| |--|+..|..|+++|++|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            678888 577999999999999999999754

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=88.15  E-value=0.21  Score=35.27  Aligned_cols=30  Identities=23%  Similarity=0.362  Sum_probs=26.3

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|+|+ |.-|...|..++++|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            778877 688999999999999999999763

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=88.12  E-value=1.9  Score=28.60  Aligned_cols=59  Identities=8%  Similarity=-0.082  Sum_probs=43.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSD   73 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~   73 (167)
                      +.++|=.|++.|.   ++..|++++++|+.++-++.-++...+.+....-.++.++..|..+
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~   75 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES   75 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccc
Confidence            6678888988774   4456677889999999998877777666655233468888877654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.95  E-value=3.2  Score=29.26  Aligned_cols=79  Identities=8%  Similarity=-0.113  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCC-CchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHH-h
Q 031016           11 CRGIAAIVGVG-PNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVL-S   86 (167)
Q Consensus        11 ~~~~~lItGa~-~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~-~   86 (167)
                      +++.+|=..+. |+++.+    ++..|++|+.++.+...++...+.++..  ...++.++..|+.      +++.... +
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            46677755554 444443    4567899999999988888777766541  2235788876663      2233333 4


Q ss_pred             cCCccEEEEcCCC
Q 031016           87 LGFVEVLVYNAYQ   99 (167)
Q Consensus        87 ~~~i~~lv~~ag~   99 (167)
                      ..++|++|..+-.
T Consensus       202 ~~~fD~IilDPP~  214 (309)
T d2igta1         202 GSTYDIILTDPPK  214 (309)
T ss_dssp             TCCBSEEEECCCS
T ss_pred             CCCCCEEEECCCc
Confidence            5689999998754

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.89  E-value=1.6  Score=26.11  Aligned_cols=81  Identities=16%  Similarity=0.228  Sum_probs=50.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      .+++||+-....+...+.+.|-+.|++|.......+.    .+.++. ...++.+....+-+.+.+ +++.++. ..+.+
T Consensus         3 k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a----~~~l~~-~~~dlii~D~~mp~~~G~-el~~~l~~~~~~~   76 (123)
T d1krwa_           3 RGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEV----LAALAS-KTPDVLLSDIRMPGMDGL-ALLKQIKQRHPML   76 (123)
T ss_dssp             CCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHH----HHHHTT-CCCSEEEECCSSSSSTTH-HHHHHHHHHSSSC
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHH----HHHHHh-CCCCEEEehhhcCCchHH-HHHHHHHHhCCCC
Confidence            4579999999999999999998999999765544333    333333 334444443333333333 3456665 56667


Q ss_pred             cEEEEcCC
Q 031016           91 EVLVYNAY   98 (167)
Q Consensus        91 ~~lv~~ag   98 (167)
                      -+++.++-
T Consensus        77 piI~~t~~   84 (123)
T d1krwa_          77 PVIIMTAH   84 (123)
T ss_dssp             CEEESCCC
T ss_pred             eEEEEecC
Confidence            77766653

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.70  E-value=1.9  Score=30.48  Aligned_cols=75  Identities=15%  Similarity=0.132  Sum_probs=48.6

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      ++++||-.|++.|+   ++..++++|+ +|++++.++ .+..+.+..+.. ...++.++..|+.+.+         ....
T Consensus        38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~---------~~~~  104 (328)
T d1g6q1_          38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH---------LPFP  104 (328)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC---------CSSS
T ss_pred             CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc---------Cccc
Confidence            68999999998774   4556677887 688888764 333344433331 3446888888876531         0235


Q ss_pred             CccEEEEcCC
Q 031016           89 FVEVLVYNAY   98 (167)
Q Consensus        89 ~i~~lv~~ag   98 (167)
                      ++|+++...-
T Consensus       105 ~~D~i~se~~  114 (328)
T d1g6q1_         105 KVDIIISEWM  114 (328)
T ss_dssp             CEEEEEECCC
T ss_pred             ceeEEEEEec
Confidence            7888887653

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=87.44  E-value=1.6  Score=26.77  Aligned_cols=86  Identities=14%  Similarity=0.144  Sum_probs=49.4

Q ss_pred             CCcEEEEEcCC---CchhHHHHHHHHHcCCeEEEEecChh--hHH--HHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHH
Q 031016           11 CRGIAAIVGVG---PNLGRSIARKFAHEGYTVAILARDLG--RLS--RFADEIAREEKSQVFAIRIDCSDSRSVREAFEG   83 (167)
Q Consensus        11 ~~~~~lItGa~---~~iG~~~a~~l~~~g~~v~~~~r~~~--~~~--~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (167)
                      ..|++.|+|+|   +..|..+.+.|.+.|++++.+.-++.  ...  .....+.. ....+..+. =+..++.+..++++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~-i~~~iD~v~-v~~p~~~v~~~v~~   89 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLD-LKEPVDILD-VFRPPSALMDHLPE   89 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGG-CCSCCSEEE-ECSCHHHHTTTHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhh-ccCCCceEE-EeccHHHHHHHHHH
Confidence            45889999998   67999999999999999877643321  100  11111111 122222221 12346667777777


Q ss_pred             HHhcCCccEEEEcCCC
Q 031016           84 VLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        84 ~~~~~~i~~lv~~ag~   99 (167)
                      +.+.+ +..++...|.
T Consensus        90 ~~~~g-~k~i~~q~G~  104 (136)
T d1iuka_          90 VLALR-PGLVWLQSGI  104 (136)
T ss_dssp             HHHHC-CSCEEECTTC
T ss_pred             HHhhC-CCeEEEecCc
Confidence            66333 4455566665

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.36  E-value=3.5  Score=29.05  Aligned_cols=78  Identities=10%  Similarity=-0.045  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCC-CchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcC--CcEEEEEeecCCHHHHHHHHHHHH-
Q 031016           11 CRGIAAIVGVG-PNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEK--SQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus        11 ~~~~~lItGa~-~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .++++|=.++. |+++..+    +..|+ +|+.++.++..++...+.++. .+  .++.++..|+.      ..+..+. 
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~-ngl~~~~~~~~~d~~------~~~~~~~~  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKL-NGVEDRMKFIVGSAF------EEMEKLQK  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHH-TTCGGGEEEEESCHH------HHHHHHHH
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHH-cCCCccceeeechhh------hhhHHHHh
Confidence            36777766664 5555443    34566 799999999988888877765 43  35777776663      2233333 


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                      +..++|.+|.++-.
T Consensus       214 ~~~~fD~Vi~DpP~  227 (324)
T d2as0a2         214 KGEKFDIVVLDPPA  227 (324)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             ccCCCCchhcCCcc
Confidence            44689999998854

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=87.33  E-value=0.29  Score=35.08  Aligned_cols=29  Identities=17%  Similarity=0.231  Sum_probs=25.0

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      |+|+|+ |.-|..+|.+|+++|.+|+++.+
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEec
Confidence            566666 78899999999999999999976

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.28  E-value=0.4  Score=30.05  Aligned_cols=31  Identities=19%  Similarity=0.335  Sum_probs=24.5

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcC---CeEEEEec
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEG---YTVAILAR   44 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g---~~v~~~~r   44 (167)
                      .+.|.||||..|+.+.+.|.++.   .++..++.
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            38999999999999999998654   35665543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.27  E-value=2.3  Score=26.83  Aligned_cols=73  Identities=16%  Similarity=0.077  Sum_probs=40.1

Q ss_pred             EEEEcCCCchhHHHHHH-HHH-c----CCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           15 AAIVGVGPNLGRSIARK-FAH-E----GYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~-l~~-~----g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      +.|.||+ ++|...+.. ++. .    ...+++++.++++++...+............   ..+..  ..+.++      
T Consensus         3 IaiIGaG-s~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~---~~t~~--~~~~l~------   70 (162)
T d1up7a1           3 IAVIGGG-SSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV---LISDT--FEGAVV------   70 (162)
T ss_dssp             EEEETTT-CTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE---EECSS--HHHHHT------
T ss_pred             EEEECCC-HHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE---EEecC--cccccC------
Confidence            6778874 456555533 222 1    3479999999888775544433322222222   12221  122222      


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .-|++|.++|.
T Consensus        71 ~aDvVVita~~   81 (162)
T d1up7a1          71 DAKYVIFQFRP   81 (162)
T ss_dssp             TCSEEEECCCT
T ss_pred             CCCEEEEeccc
Confidence            46999999987

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=87.13  E-value=1.9  Score=25.62  Aligned_cols=81  Identities=17%  Similarity=0.264  Sum_probs=52.0

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|.+||+-....+...+.+.|-+.|++|.......+.    .+.++. ...++.+....+-+.+.+ +++.+++ ..+.+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~ea----l~~~~~-~~~dlillD~~mP~~~G~-el~~~lr~~~~~~   74 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQA----LDIVTK-ERPDLVLLDMKIPGMDGI-EILKRMKVIDENI   74 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHH----HHHHHH-HCCSEEEEESCCTTCCHH-HHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHH----HHHHHh-CCCCEEEEeccCCCCCHH-HHHHHHHHhCCCC
Confidence            4779999998889888888888899998754433332    333333 344565555544454433 4456666 55667


Q ss_pred             cEEEEcCC
Q 031016           91 EVLVYNAY   98 (167)
Q Consensus        91 ~~lv~~ag   98 (167)
                      .+++.++-
T Consensus        75 pvi~lt~~   82 (119)
T d1peya_          75 RVIIMTAY   82 (119)
T ss_dssp             EEEEEESS
T ss_pred             cEEEEecC
Confidence            77777663

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.03  E-value=0.11  Score=32.72  Aligned_cols=40  Identities=23%  Similarity=0.231  Sum_probs=27.8

Q ss_pred             EEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHH
Q 031016           17 IVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIA   57 (167)
Q Consensus        17 ItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   57 (167)
                      +.|+ |.+|+++++.|.+.+.-+.+.+|++++++++.+...
T Consensus         4 fIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           4 FVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             EESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             EEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            3444 789999999886644334578999999888877654

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.66  E-value=0.28  Score=35.88  Aligned_cols=31  Identities=23%  Similarity=0.377  Sum_probs=26.8

Q ss_pred             EEEEcCCCchhHHHHHHHHH------cCCeEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAH------EGYTVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~------~g~~v~~~~r~~   46 (167)
                      |+|+|| |.-|...|..|++      +|.+|+++.+..
T Consensus        35 ViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          35 VVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            788888 6889999999987      799999998864

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.66  E-value=0.36  Score=31.86  Aligned_cols=30  Identities=17%  Similarity=0.138  Sum_probs=26.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|+|+ |..|...+.++++.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            577887 799999999999999999999774

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.41  E-value=0.4  Score=31.87  Aligned_cols=33  Identities=18%  Similarity=0.278  Sum_probs=27.8

Q ss_pred             cEEEEEcCCCchhHH-----HHHHHHHcCCeEEEEecC
Q 031016           13 GIAAIVGVGPNLGRS-----IARKFAHEGYTVAILARD   45 (167)
Q Consensus        13 ~~~lItGa~~~iG~~-----~a~~l~~~g~~v~~~~r~   45 (167)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-+
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            789999999998875     567888899999999765

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.17  E-value=0.36  Score=34.06  Aligned_cols=33  Identities=15%  Similarity=0.136  Sum_probs=27.8

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      .--++|+|| |--|..++..|.++|.+|+++.+.
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcC
Confidence            344889998 688999999999999999998764

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=86.14  E-value=0.41  Score=32.81  Aligned_cols=33  Identities=24%  Similarity=0.371  Sum_probs=26.3

Q ss_pred             cEEEEEcCCCchhHH-----HHHHHHHcCCeEEEEecCh
Q 031016           13 GIAAIVGVGPNLGRS-----IARKFAHEGYTVAILARDL   46 (167)
Q Consensus        13 ~~~lItGa~~~iG~~-----~a~~l~~~g~~v~~~~r~~   46 (167)
                      |++.|+| =||.|+.     ++..|+++|++|.+++.++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            5677888 7788875     4568899999999998764

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.05  E-value=0.33  Score=34.29  Aligned_cols=29  Identities=17%  Similarity=0.284  Sum_probs=25.6

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ++|+|+ |..|...|..++++|++|+++.+
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK   50 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDK   50 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeC
Confidence            677776 78999999999999999999965

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.00  E-value=0.39  Score=31.62  Aligned_cols=30  Identities=23%  Similarity=0.278  Sum_probs=26.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|.|+ |..|...|..+++.|.+|+++.+.
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            778888 688999999999999999999764

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=85.98  E-value=2.2  Score=25.21  Aligned_cols=80  Identities=16%  Similarity=0.212  Sum_probs=49.9

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccE
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEV   92 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~   92 (167)
                      |.+||+-....+...+...|.+.|++|.......+.+    +.++. ...++.+....+.+.+.+ +++.++.+.+.+-+
T Consensus         1 KrILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~eal----~~~~~-~~~dlillD~~mp~~~G~-~~~~~i~~~~~~pv   74 (117)
T d2a9pa1           1 KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREAL----EQFEA-EQPDIIILDLMLPEIDGL-EVAKTIRKTSSVPI   74 (117)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHH-HCCSEEEECSSCSSSCHH-HHHHHHHTTCCCCE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHH----HHHHh-cCCCEEEeccccCCCCcc-HHHHHHHhCCCCCE
Confidence            5688888888899999999999999987554433333    33333 444555554444454443 45555553345666


Q ss_pred             EEEcCC
Q 031016           93 LVYNAY   98 (167)
Q Consensus        93 lv~~ag   98 (167)
                      ++.++.
T Consensus        75 I~lt~~   80 (117)
T d2a9pa1          75 LMLSAK   80 (117)
T ss_dssp             EEEESC
T ss_pred             EEEecC
Confidence            666653

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=85.70  E-value=3.1  Score=26.80  Aligned_cols=65  Identities=12%  Similarity=0.038  Sum_probs=49.2

Q ss_pred             HHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCCccEEEEcCCC
Q 031016           32 FAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGFVEVLVYNAYQ   99 (167)
Q Consensus        32 l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i~~lv~~ag~   99 (167)
                      ..+++.++++.+......+.+.+.+.. .+-.+..+..|++..+ -.+.++.. +.|.+++||.+--.
T Consensus        27 ~~~~~~~~iif~~~~~~~~~~~~~l~~-~g~~~~~~hg~~~~~e-R~~~l~~F-r~g~~~vLVaTdv~   91 (181)
T d1t5la2          27 RVERNERTLVTTLTKKMAEDLTDYLKE-AGIKVAYLHSEIKTLE-RIEIIRDL-RLGKYDVLVGINLL   91 (181)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHHHT-TTCCEEEECSSCCHHH-HHHHHHHH-HHTSCSEEEESCCC
T ss_pred             HHhcCCeEEEEeehhhhhHHHHHHHHh-CCcceeEecCCccHHH-HHHHHHHH-HCCCCCEEEehhHH
Confidence            334678899999988888888888887 7888999999988654 44444443 24789999988643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.55  E-value=2.7  Score=26.01  Aligned_cols=76  Identities=11%  Similarity=0.174  Sum_probs=50.5

Q ss_pred             CCCcEEEEEcCC-CchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHh
Q 031016           10 SCRGIAAIVGVG-PNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLS   86 (167)
Q Consensus        10 ~~~~~~lItGa~-~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (167)
                      +.++.+|=.|++ |.+|.    ..+.+|+ +|+.++.+++..+.+.+.++.. ...++.++..|..+      .++.  .
T Consensus        13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~~--~   80 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AIDC--L   80 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHHH--B
T ss_pred             CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cccc--c
Confidence            468888766665 44554    3456777 7999999998888777777652 12358888877532      2222  2


Q ss_pred             cCCccEEEEcC
Q 031016           87 LGFVEVLVYNA   97 (167)
Q Consensus        87 ~~~i~~lv~~a   97 (167)
                      ..+.|+++..+
T Consensus        81 ~~~fDiIf~DP   91 (152)
T d2esra1          81 TGRFDLVFLDP   91 (152)
T ss_dssp             CSCEEEEEECC
T ss_pred             ccccceeEech
Confidence            36799998876

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.44  E-value=0.25  Score=32.09  Aligned_cols=33  Identities=15%  Similarity=0.099  Sum_probs=28.2

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++-++|+|+ |..|...|..+++.|.+|+++.+.
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            466889998 689999999999999999998653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.17  E-value=0.63  Score=30.37  Aligned_cols=36  Identities=17%  Similarity=0.225  Sum_probs=27.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHH
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRF   52 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~   52 (167)
                      +.|.| .|-+|+.+|..|+ +|++|+..+-+++..+++
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            44556 6899999997664 799999999887765544

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.06  E-value=0.54  Score=31.76  Aligned_cols=31  Identities=26%  Similarity=0.246  Sum_probs=26.5

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCC-eEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGY-TVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~   46 (167)
                      ++|+|| |--|+.+|..|.++|. +|.++.+.+
T Consensus         4 V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           4 ILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            788888 6889999999999995 888888754

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.95  E-value=0.45  Score=32.84  Aligned_cols=32  Identities=25%  Similarity=0.332  Sum_probs=27.3

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecC
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHE-GYTVAILARD   45 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~   45 (167)
                      .=++|+|| |--|+..|.+|+++ |.+|.++.+.
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~   66 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQS   66 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecC
Confidence            34889998 78999999999974 9999999875

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=84.89  E-value=0.46  Score=33.73  Aligned_cols=29  Identities=34%  Similarity=0.573  Sum_probs=24.8

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ++|+|+ |--|..+|.+|++.|.+|+++.+
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEec
Confidence            677776 56699999999999999999965

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=84.66  E-value=0.49  Score=30.15  Aligned_cols=30  Identities=23%  Similarity=0.293  Sum_probs=25.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|+|| |..|...|..+.+.|.+|+++.+.
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            677877 799999999999999999998753

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.61  E-value=1.2  Score=28.54  Aligned_cols=74  Identities=9%  Similarity=-0.006  Sum_probs=38.3

Q ss_pred             EEEEcC-CCchhHHHHHHHHHcC----CeEEEEecChhh--HHHHHHHH---HhhcCCcEEEEEeecCCHHHHHHHHHHH
Q 031016           15 AAIVGV-GPNLGRSIARKFAHEG----YTVAILARDLGR--LSRFADEI---AREEKSQVFAIRIDCSDSRSVREAFEGV   84 (167)
Q Consensus        15 ~lItGa-~~~iG~~~a~~l~~~g----~~v~~~~r~~~~--~~~~~~~l---~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (167)
                      +.|.|| +.+.+..++..+....    .++++++.+++.  ++.+....   ....+.+....  ..+|..   +.++  
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~~---~al~--   76 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDRR---RALD--   76 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCHH---HHHT--
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCch---hhcC--
Confidence            566676 4456666666555431    378888987653  33222111   11123332222  334432   1222  


Q ss_pred             HhcCCccEEEEcCCC
Q 031016           85 LSLGFVEVLVYNAYQ   99 (167)
Q Consensus        85 ~~~~~i~~lv~~ag~   99 (167)
                          .-|++|+++|.
T Consensus        77 ----gaDvVv~ta~~   87 (169)
T d1s6ya1          77 ----GADFVTTQFRV   87 (169)
T ss_dssp             ----TCSEEEECCCT
T ss_pred             ----CCCEEEEcccc
Confidence                46999999987

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.46  E-value=0.48  Score=33.33  Aligned_cols=31  Identities=26%  Similarity=0.321  Sum_probs=25.9

Q ss_pred             EEEEcCCCchhHHHHHHHHH-----cCCeEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAH-----EGYTVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~-----~g~~v~~~~r~~   46 (167)
                      ++|+|| |-.|..+|..|++     +|.+|+++.+.+
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            678887 7999999999974     699999998764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.40  E-value=0.55  Score=33.25  Aligned_cols=34  Identities=24%  Similarity=0.211  Sum_probs=26.9

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcC--CeEEEEecCh
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEG--YTVAILARDL   46 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g--~~v~~~~r~~   46 (167)
                      -|.++|+|| |--|...|..|+++|  .+|+++.++.
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            367888888 577888888998876  5899987764

>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Lac-repressor (lacR) core (C-terminal domain)
species: Escherichia coli [TaxId: 562]

Probab=84.35  E-value=4.1  Score=27.37  Aligned_cols=79  Identities=18%  Similarity=0.083  Sum_probs=44.5

Q ss_pred             EEcCCCchhHHHHHHHHHcCC-eEEEEecCh------hhHHHHHHHHHhhcCCc-EEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           17 IVGVGPNLGRSIARKFAHEGY-TVAILARDL------GRLSRFADEIAREEKSQ-VFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        17 ItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~------~~~~~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      |+-.....|+.++++|.++|+ +|.++..+.      ++.+...+.++. .+.. ......+. +.+...+.+.+.. ..
T Consensus        98 V~~D~~~~~~~~~~~L~~~G~~~i~~i~~~~~~~~~~~R~~g~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  175 (271)
T d1jyea_          98 IIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTR-NQIQPIAEREGDW-SAMSGFQQTMQMLNEG  175 (271)
T ss_dssp             EEECHHHHHHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHHHHHHHHH-TTCCCSEEEECCS-SHHHHHHHHHHHHHTT
T ss_pred             cccchhhccccceeeeeccccccccccccccccchHHhhhHHHHHHhhh-ccccccceecccc-ccccccchhhhhhhcc
Confidence            333344567888999999998 465554221      223344455554 3333 33344454 4444555555555 66


Q ss_pred             CCccEEEEcC
Q 031016           88 GFVEVLVYNA   97 (167)
Q Consensus        88 ~~i~~lv~~a   97 (167)
                      ++++.++...
T Consensus       176 ~~~~ai~~~~  185 (271)
T d1jyea_         176 IVPTAMLVAN  185 (271)
T ss_dssp             CCCSEEEESS
T ss_pred             cccchhhccc
Confidence            6788777665

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=84.30  E-value=0.46  Score=34.03  Aligned_cols=29  Identities=21%  Similarity=0.305  Sum_probs=24.8

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      |+|+|+ |--|..+|.+|+++|.+|+++.+
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeC
Confidence            666666 67889999999999999999965

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.26  E-value=0.58  Score=30.89  Aligned_cols=30  Identities=27%  Similarity=0.327  Sum_probs=26.1

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|.|+ |.-|...|..+++.|.+|+++.+.
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            677777 688999999999999999999754

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=84.14  E-value=3  Score=27.27  Aligned_cols=84  Identities=14%  Similarity=0.128  Sum_probs=47.8

Q ss_pred             EEEEEcCCCchhHH-----HHHHHHH----cCCeEEEEecChhhHHHHH----HHHHhh---------cCCcEEEEEeec
Q 031016           14 IAAIVGVGPNLGRS-----IARKFAH----EGYTVAILARDLGRLSRFA----DEIARE---------EKSQVFAIRIDC   71 (167)
Q Consensus        14 ~~lItGa~~~iG~~-----~a~~l~~----~g~~v~~~~r~~~~~~~~~----~~l~~~---------~~~~~~~~~~D~   71 (167)
                      .++|.||||.+.+-     +-..+.+    ...+|+.++|++-..++..    +.++..         .-.++.+...|+
T Consensus         7 ~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~   86 (195)
T d1h9aa1           7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDV   86 (195)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCT
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEee
Confidence            34578999988863     3333322    1246888899753333322    222211         234688899999


Q ss_pred             CCHHHHHHHHHHH---H-hcC-CccEEEEcC
Q 031016           72 SDSRSVREAFEGV---L-SLG-FVEVLVYNA   97 (167)
Q Consensus        72 ~~~~~~~~~~~~~---~-~~~-~i~~lv~~a   97 (167)
                      +++++...+-+.+   . ..+ .-..+++-|
T Consensus        87 ~~~~~~~~l~~~l~~~~~~~~~~~~rifYLA  117 (195)
T d1h9aa1          87 TDAASYAVLKEAIEEAADKFDIDGNRIFYMS  117 (195)
T ss_dssp             TCTTTHHHHHHHHHHHHHHHTCCSCEEEEEC
T ss_pred             ccHhhHHHHHHHHHHHHhhcCCCcceEEEEe
Confidence            9887666554444   3 322 334666666

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.06  E-value=0.91  Score=31.00  Aligned_cols=35  Identities=23%  Similarity=0.232  Sum_probs=29.0

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHH-cCCeEEEEec
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAH-EGYTVAILAR   44 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~-~g~~v~~~~r   44 (167)
                      ++++|+++|-|- |.+|..+++.|.+ .|++|+.++.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            468999999888 7899999999986 4888877643

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=83.88  E-value=2.8  Score=24.77  Aligned_cols=81  Identities=11%  Similarity=0.144  Sum_probs=52.6

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCc
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFV   90 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i   90 (167)
                      +|.+||+-...-+...+...|-+.|++|.......+.+    +.+.. ...++.+....+-+.+.++ ++.+++ ..+.+
T Consensus         2 ~krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al----~~l~~-~~~dlillD~~mp~~~G~~-~~~~~r~~~~~~   75 (121)
T d1mvoa_           2 NKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEAL----KKAET-EKPDLIVLDVMLPKLDGIE-VCKQLRQQKLMF   75 (121)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHH-HCCSEEEEESSCSSSCHHH-HHHHHHHTTCCC
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHH----HHHhc-ccccEEEecccccCCCCch-hhhhhhccCCCC
Confidence            46799999988888888888889999987654433333    33333 4456666666555555443 455565 55556


Q ss_pred             cEEEEcCC
Q 031016           91 EVLVYNAY   98 (167)
Q Consensus        91 ~~lv~~ag   98 (167)
                      .+++.++-
T Consensus        76 ~ii~lt~~   83 (121)
T d1mvoa_          76 PILMLTAK   83 (121)
T ss_dssp             CEEEEECT
T ss_pred             EEEEEEee
Confidence            66766654

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.79  E-value=0.91  Score=29.86  Aligned_cols=36  Identities=14%  Similarity=0.320  Sum_probs=30.1

Q ss_pred             CCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016            9 SSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus         9 ~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      .+++|.|+|.|++ .-|..+|..+++.++.++.+.|.
T Consensus        29 ~~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          29 DFSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCEEEEECCC-ccHHHHHHHHHhhhccccccccc
Confidence            4689999999985 56899999999999988777654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.71  E-value=0.64  Score=29.35  Aligned_cols=24  Identities=17%  Similarity=0.343  Sum_probs=21.7

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY   37 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~   37 (167)
                      .+.|.||||..|.++.+.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            589999999999999999988864

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=83.67  E-value=0.88  Score=29.56  Aligned_cols=31  Identities=19%  Similarity=0.305  Sum_probs=25.7

Q ss_pred             cEEEEEcCCCchhHHHHHHHHHcCC-eEEEEe
Q 031016           13 GIAAIVGVGPNLGRSIARKFAHEGY-TVAILA   43 (167)
Q Consensus        13 ~~~lItGa~~~iG~~~a~~l~~~g~-~v~~~~   43 (167)
                      -.+.|.||||-.|..+.+.|.++.. ++..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            4599999999999999999999854 665553

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=83.66  E-value=5.5  Score=27.99  Aligned_cols=79  Identities=5%  Similarity=-0.072  Sum_probs=51.7

Q ss_pred             CCcEEEEEcC-CCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhh-c-CCcEEEEEeecCCHHHHHHHHHHHH-
Q 031016           11 CRGIAAIVGV-GPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIARE-E-KSQVFAIRIDCSDSRSVREAFEGVL-   85 (167)
Q Consensus        11 ~~~~~lItGa-~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~~-   85 (167)
                      .++.+|=..+ +|+++.+    .+..|+ +|+.++.++..++...+.++.. . ..++.++..|+-      .+++... 
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            4677775555 4555543    344677 6889999988888777777541 1 236788887773      2233433 


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                      +..++|++|..+-.
T Consensus       214 ~~~~fD~Ii~DPP~  227 (317)
T d2b78a2         214 HHLTYDIIIIDPPS  227 (317)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             hcCCCCEEEEcChh
Confidence            44689999998754

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=83.45  E-value=3.3  Score=26.55  Aligned_cols=75  Identities=5%  Similarity=-0.039  Sum_probs=48.8

Q ss_pred             CCcEEE-EEcCCCchhHHHHHHHHHcCC-eEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hc
Q 031016           11 CRGIAA-IVGVGPNLGRSIARKFAHEGY-TVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SL   87 (167)
Q Consensus        11 ~~~~~l-ItGa~~~iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~   87 (167)
                      .++++| +-.|+|.+|.+    .+++|+ +|+.++.+....+.+.+.++.....+..++..|+.         +.+. ..
T Consensus        43 ~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~~~  109 (183)
T d2fpoa1          43 VDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQKG  109 (183)
T ss_dssp             TTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSSCC
T ss_pred             chhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------ccccccc
Confidence            455555 34445555554    556787 69999999988888887777633446777766632         2233 34


Q ss_pred             CCccEEEEcCC
Q 031016           88 GFVEVLVYNAY   98 (167)
Q Consensus        88 ~~i~~lv~~ag   98 (167)
                      .++|+++..+-
T Consensus       110 ~~fDlIf~DPP  120 (183)
T d2fpoa1         110 TPHNIVFVDPP  120 (183)
T ss_dssp             CCEEEEEECCS
T ss_pred             cccCEEEEcCc
Confidence            67999988873

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=83.19  E-value=4  Score=26.02  Aligned_cols=77  Identities=13%  Similarity=0.080  Sum_probs=52.4

Q ss_pred             CCchhHHHHHHHHH-cCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEe-ecCCHHHHHHHHHHHHhcCCccEEEEcCC
Q 031016           21 GPNLGRSIARKFAH-EGYTVAILARDLGRLSRFADEIAREEKSQVFAIRI-DCSDSRSVREAFEGVLSLGFVEVLVYNAY   98 (167)
Q Consensus        21 ~~~iG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~i~~lv~~ag   98 (167)
                      ...+|..+...+++ .|+.|+-.+... ..+++.+...+ .+.++..++. +-+..+.++++++.+++.+.-++.|...|
T Consensus        49 ~Hd~G~~~va~~l~~~G~eVi~lg~~~-~~e~iv~aa~~-~~advI~iSs~~~~~~~~~~~l~~~L~~~g~~~v~VivGG  126 (168)
T d7reqa2          49 GHDRGQKVIATAYADLGFDVDVGPLFQ-TPEETARQAVE-ADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGG  126 (168)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEECCTTB-CHHHHHHHHHH-HTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred             HHHHHHHHHHHHHHhCCcceecCCCcC-cHHHHHHHHHc-cCCCEEEEecCcccchHHHHHHHHHHHhcCCCCeEEEEeC
Confidence            36889888887775 699998776433 23455555555 6777777775 44457778888888875555667776666


Q ss_pred             C
Q 031016           99 Q   99 (167)
Q Consensus        99 ~   99 (167)
                      .
T Consensus       127 ~  127 (168)
T d7reqa2         127 V  127 (168)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.16  E-value=0.7  Score=30.31  Aligned_cols=30  Identities=23%  Similarity=0.268  Sum_probs=26.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|.|+ |..|...|..+++.|.+|.++.+.
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            677777 789999999999999999999764

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.05  E-value=4  Score=25.92  Aligned_cols=73  Identities=12%  Similarity=0.148  Sum_probs=41.4

Q ss_pred             EEEEcCCCchhH--HHHHHHHHc----CCeEEEEecChhhHHHHHHHHHhh---cCCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           15 AAIVGVGPNLGR--SIARKFAHE----GYTVAILARDLGRLSRFADEIARE---EKSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        15 ~lItGa~~~iG~--~~a~~l~~~----g~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.|.|| |.+|.  ++...++..    +.++++.+.++++++.....++..   .+....+..  .+|   .++.+.   
T Consensus         5 I~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td---~~eaL~---   75 (171)
T d1obba1           5 IGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMN---LDDVII---   75 (171)
T ss_dssp             EEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESC---HHHHHT---
T ss_pred             EEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCC---hhhccc---
Confidence            667776 55554  455555532    348999999988776544433321   333333322  222   222333   


Q ss_pred             hcCCccEEEEcCCC
Q 031016           86 SLGFVEVLVYNAYQ   99 (167)
Q Consensus        86 ~~~~i~~lv~~ag~   99 (167)
                         .-|++|++++.
T Consensus        76 ---dad~Vv~~~~~   86 (171)
T d1obba1          76 ---DADFVINTAMV   86 (171)
T ss_dssp             ---TCSEEEECCCT
T ss_pred             ---CCCeEeeeccc
Confidence               56999999876

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=82.87  E-value=4.5  Score=27.53  Aligned_cols=77  Identities=9%  Similarity=-0.051  Sum_probs=50.2

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHc-CCeEEEEecChhhHHHHHHHHHhh-cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHE-GYTVAILARDLGRLSRFADEIARE-EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+.++|=.|++.|.   ++..|+++ |++|+.++-++..++...+.+... ...++.++.+|+.+..     +    ..+
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~-----~----~~~  134 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-----C----EDN  134 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----S----CTT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc-----c----ccc
Confidence            46788888887652   34445554 789999999888777666665542 2346888888875421     0    224


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|.++..-..
T Consensus       135 sfD~V~~~~~l  145 (282)
T d2o57a1         135 SYDFIWSQDAF  145 (282)
T ss_dssp             CEEEEEEESCG
T ss_pred             ccchhhccchh
Confidence            67777766544

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.54  E-value=0.61  Score=30.77  Aligned_cols=30  Identities=17%  Similarity=0.158  Sum_probs=26.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|+|+ |..|...|..+++.|.+|.++.++
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            778886 699999999999999999999765

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=82.39  E-value=0.6  Score=32.82  Aligned_cols=29  Identities=17%  Similarity=0.235  Sum_probs=25.4

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      ++|+|+ |.-|+..|..++++|++|+++..
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK   36 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSL   36 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEec
Confidence            788886 68899999999999999999854

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.23  E-value=0.37  Score=31.32  Aligned_cols=32  Identities=16%  Similarity=0.064  Sum_probs=27.5

Q ss_pred             CcEEEEEcCCCchhHHHHHHHHHcCCeEEEEec
Q 031016           12 RGIAAIVGVGPNLGRSIARKFAHEGYTVAILAR   44 (167)
Q Consensus        12 ~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r   44 (167)
                      .+.++|+|| |..|...|..+++.|.+++++.+
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECC
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEe
Confidence            567899998 58999999999999999988864

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.11  E-value=1.2  Score=28.86  Aligned_cols=29  Identities=21%  Similarity=0.289  Sum_probs=24.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCC-eEEEE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGY-TVAIL   42 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~-~v~~~   42 (167)
                      .+.|.||||-.|..+.+.|.++-. ++..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l   32 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYL   32 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEe
Confidence            589999999999999999998754 66555

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.95  E-value=0.1  Score=34.98  Aligned_cols=24  Identities=21%  Similarity=0.213  Sum_probs=21.2

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTV   39 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v   39 (167)
                      ++|+|| |-+|...|..|+++|++|
T Consensus         3 V~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           3 VVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             EEEECc-hHHHHHHHHHHHHCCCCc
Confidence            788888 799999999999999754

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.87  E-value=4.6  Score=25.83  Aligned_cols=76  Identities=12%  Similarity=0.060  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhh--cCCcEEEEEeecCCHHHHHHHHHHHHhcC
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIARE--EKSQVFAIRIDCSDSRSVREAFEGVLSLG   88 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (167)
                      .+++++=.|++.|   .++..+++.+.+|++++-++...+...+.++..  ...++.+...|+.+.  +    .    .+
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~----~----~~  118 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--V----K----DR  118 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--C----T----TS
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--h----c----cC
Confidence            5788888888766   334556677889999999988877777666542  233588888887542  1    1    25


Q ss_pred             CccEEEEcCCC
Q 031016           89 FVEVLVYNAYQ   99 (167)
Q Consensus        89 ~i~~lv~~ag~   99 (167)
                      .+|.++.+.-.
T Consensus       119 ~fD~Ii~~~p~  129 (194)
T d1dusa_         119 KYNKIITNPPI  129 (194)
T ss_dssp             CEEEEEECCCS
T ss_pred             CceEEEEcccE
Confidence            79999988743

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.82  E-value=0.85  Score=30.26  Aligned_cols=31  Identities=35%  Similarity=0.310  Sum_probs=26.7

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecCh
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARDL   46 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~   46 (167)
                      ++|+|+ |.-|+..|..+++.|.+|+++.+.+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            567776 7899999999999999999997653

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.64  E-value=4.1  Score=26.76  Aligned_cols=62  Identities=10%  Similarity=0.155  Sum_probs=41.1

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      .+.++|=.|++.|.-......+...| +|+.++.+++.++.+.+..+. . .++.++..|..++.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~-~-~ni~~i~~d~~~~~  117 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE-R-NNIIPLLFDASKPW  117 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH-C-SSEEEECSCTTCGG
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc-c-CCceEEEeeccCcc
Confidence            36789999998775444333344444 899999999888877766654 2 35556655655543

>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Escherichia coli [TaxId: 562]

Probab=81.61  E-value=5.4  Score=26.45  Aligned_cols=81  Identities=17%  Similarity=0.136  Sum_probs=56.2

Q ss_pred             CCCCCCCCC---CCCcE-EEEEcCCCchhHHHHHHHHHcCCeEEEE-ecChhhHHHHHHHHHhhcCCcEEEEEeecCCHH
Q 031016            1 MRNMTSSGS---SCRGI-AAIVGVGPNLGRSIARKFAHEGYTVAIL-ARDLGRLSRFADEIAREEKSQVFAIRIDCSDSR   75 (167)
Q Consensus         1 ~~~~~~~~~---~~~~~-~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~   75 (167)
                      |++.+....   ...+. .++++-+-.-+..+++.|.+.|.+++=+ -|.+. ..+..+.++.+++ ++.+=..-+.+.+
T Consensus         1 m~~~~~~~~~~l~~~~iipvlr~~~~~~a~~~~~al~~~Gi~~iEitl~tp~-a~~~I~~l~~~~p-~~~vGaGTV~~~~   78 (213)
T d1wbha1           1 MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTEC-AVDAIRAIAKEVP-EAIVGAGTVLNPQ   78 (213)
T ss_dssp             CCCCSSCHHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTT-HHHHHHHHHHHCT-TSEEEEESCCSHH
T ss_pred             CCCcccCHHHHHHhCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEeCCChh-HHHHHHHHHHHCC-CCeeeccccccHH
Confidence            565554321   13455 5778888899999999999999976554 45544 4555556665344 5667778999999


Q ss_pred             HHHHHHHH
Q 031016           76 SVREAFEG   83 (167)
Q Consensus        76 ~~~~~~~~   83 (167)
                      +++++.+.
T Consensus        79 ~~~~a~~a   86 (213)
T d1wbha1          79 QLAEVTEA   86 (213)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHC
Confidence            99987763

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.04  E-value=1.1  Score=29.87  Aligned_cols=87  Identities=18%  Similarity=0.122  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCCchhHH-----HHHHHHH----cCCeEEEEecChhhHHHHHHHHHh-------------hcCCcEEEEE
Q 031016           11 CRGIAAIVGVGPNLGRS-----IARKFAH----EGYTVAILARDLGRLSRFADEIAR-------------EEKSQVFAIR   68 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~-----~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~   68 (167)
                      ..-+.+|.||+|.+.+-     +-....+    ...+|+.++|++-..++..+.+..             ..-.++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            45778999999988753     3222222    235788888864322222222111             0345688999


Q ss_pred             eecCCHHHHHHHHHHHH--hcC-CccEEEEcC
Q 031016           69 IDCSDSRSVREAFEGVL--SLG-FVEVLVYNA   97 (167)
Q Consensus        69 ~D~~~~~~~~~~~~~~~--~~~-~i~~lv~~a   97 (167)
                      +|++++++.+++-+.+.  +.+ .-..+++-|
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            99999999988766554  222 344666666

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.96  E-value=0.95  Score=28.24  Aligned_cols=30  Identities=23%  Similarity=0.466  Sum_probs=24.2

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      .++|.|+ |.+|.++|..|.+ +.+|.++.+.
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TYEVTVIDKE   31 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEECSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CCCEEEEecc
Confidence            3778887 6999999999864 7799988764

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.80  E-value=3.7  Score=30.72  Aligned_cols=80  Identities=6%  Similarity=-0.023  Sum_probs=51.6

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhcCC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSLGF   89 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (167)
                      +.||.+.|.++ +....++++.|.+.|..|+.++......+...+.++. .+....  ..|-.|..++++.+.+.    +
T Consensus       343 l~Gkrv~i~~~-~~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~-~~~~~~--i~~d~~~~el~~~i~~~----~  414 (477)
T d1m1na_         343 LEGKRVMLYIG-GLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKE-MGDSTL--LYDDVTGYEFEEFVKRI----K  414 (477)
T ss_dssp             HTTCEEEECBS-SSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTT-SCTTCE--EEESCBHHHHHHHHHHH----C
T ss_pred             hcCCcEEEecC-chhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHh-cCCCcE--EecCCCHHHHHHHHHhc----C
Confidence            36888888876 5688999999988999988875543332222222222 222222  23555677788888876    6


Q ss_pred             ccEEEEcC
Q 031016           90 VEVLVYNA   97 (167)
Q Consensus        90 i~~lv~~a   97 (167)
                      +|+++-+.
T Consensus       415 pDL~ig~~  422 (477)
T d1m1na_         415 PDLIGSGI  422 (477)
T ss_dssp             CSEEEECH
T ss_pred             CCEEEECc
Confidence            88888653

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=80.70  E-value=2.6  Score=24.94  Aligned_cols=80  Identities=11%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             EEEEEcCCCchhHHHHHHHHHcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHH-hcCCccE
Q 031016           14 IAAIVGVGPNLGRSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVL-SLGFVEV   92 (167)
Q Consensus        14 ~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~i~~   92 (167)
                      .+||+-....+...+...|-+.|++|.......+.++.    +.+....++.+....+-+.+.+ ++++.++ ....+-+
T Consensus         4 rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al~~----l~~~~~~dliilD~~lp~~~G~-el~~~ir~~~~~~pi   78 (118)
T d2b4aa1           4 RVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQH----RSQLSTCDLLIVSDQLVDLSIF-SLLDIVKEQTKQPSV   78 (118)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHT----GGGGGSCSEEEEETTCTTSCHH-HHHHHHTTSSSCCEE
T ss_pred             EEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHHHH----HHhcCCCCEEEEeCCCCCCCHH-HHHHHHHhcCCCCcE
Confidence            48888888899999999999999999766544433322    2221234555555555454444 5567776 5556777


Q ss_pred             EEEcCC
Q 031016           93 LVYNAY   98 (167)
Q Consensus        93 lv~~ag   98 (167)
                      ++.++.
T Consensus        79 i~lt~~   84 (118)
T d2b4aa1          79 LILTTG   84 (118)
T ss_dssp             EEEESC
T ss_pred             EEEECC
Confidence            887764

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=80.66  E-value=2.4  Score=29.18  Aligned_cols=75  Identities=9%  Similarity=0.002  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCCchhHHHHHHHH---HcCCeEEEEecChhhHHHHHHHHHhhcCCcEEEEEeecCCHHHHHHHHHHHHhc
Q 031016           11 CRGIAAIVGVGPNLGRSIARKFA---HEGYTVAILARDLGRLSRFADEIAREEKSQVFAIRIDCSDSRSVREAFEGVLSL   87 (167)
Q Consensus        11 ~~~~~lItGa~~~iG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (167)
                      +.+.+|=.|++.|.   ++..|+   ..|++|+.++.++..++...+.++. .+.++.+...|+.+..     +     .
T Consensus        27 ~~~~ILDiGcG~G~---~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~-~~~~~~f~~~d~~~~~-----~-----~   92 (281)
T d2gh1a1          27 KPVHIVDYGCGYGY---LGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL-LPYDSEFLEGDATEIE-----L-----N   92 (281)
T ss_dssp             SCCEEEEETCTTTH---HHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHS-SSSEEEEEESCTTTCC-----C-----S
T ss_pred             CcCEEEEecCcCCH---HHHHHHHhCCCCCEEEEEecchhHhhhhhccccc-cccccccccccccccc-----c-----c
Confidence            45678888886552   333344   3578999999998888887777765 5557888877876532     0     1


Q ss_pred             CCccEEEEcCCC
Q 031016           88 GFVEVLVYNAYQ   99 (167)
Q Consensus        88 ~~i~~lv~~ag~   99 (167)
                      +++|+++.+...
T Consensus        93 ~~fD~v~~~~~l  104 (281)
T d2gh1a1          93 DKYDIAICHAFL  104 (281)
T ss_dssp             SCEEEEEEESCG
T ss_pred             CCceEEEEehhh
Confidence            357777766654

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=80.62  E-value=5.5  Score=28.62  Aligned_cols=85  Identities=12%  Similarity=0.122  Sum_probs=51.4

Q ss_pred             CCCCCCCCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecChh----hH-HHHHHHHHhhcCCcEEEEEeecCCHHHHH
Q 031016            4 MTSSGSSCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARDLG----RL-SRFADEIAREEKSQVFAIRIDCSDSRSVR   78 (167)
Q Consensus         4 ~~~~~~~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~~~----~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~   78 (167)
                      |....++.|=+|+=.+ ..--|...++.|++.||+||=+.+...    +. ......    .+..-+.+.+|+.+++..+
T Consensus         3 ~~~~gPL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~----~n~~K~si~ldl~~~~G~~   77 (402)
T d1xk7a1           3 MPKFGPLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQL----SRRNLHALSLNIFKDEGRE   77 (402)
T ss_dssp             CCCCSTTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHH----HTTTCEEEEECTTSHHHHH
T ss_pred             CCCCcCCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHH----hCCCCeEEEEeCcCHHHHH
Confidence            4444567776665333 234477888888899999998865321    11 111111    2334467788999988766


Q ss_pred             HHHHHHHhcCCccEEEEc
Q 031016           79 EAFEGVLSLGFVEVLVYN   96 (167)
Q Consensus        79 ~~~~~~~~~~~i~~lv~~   96 (167)
                      .+.+-+   ..-|++|.|
T Consensus        78 ~~~~Lv---~~aDv~i~n   92 (402)
T d1xk7a1          78 AFLKLM---ETTDIFIEA   92 (402)
T ss_dssp             HHHHHH---TTCSEEEEE
T ss_pred             HHHHHH---hhcCCceee
Confidence            554443   456777665

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.53  E-value=1.7  Score=28.84  Aligned_cols=36  Identities=25%  Similarity=0.324  Sum_probs=29.0

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHH--------------------HcCC-eEEEEecCh
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFA--------------------HEGY-TVAILARDL   46 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~--------------------~~g~-~v~~~~r~~   46 (167)
                      ..+|.++|.|+ |..+..+|+-++                    +.|+ +|.+++|..
T Consensus        37 ~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg   93 (216)
T d1lqta1          37 LSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG   93 (216)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred             ccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence            46899999998 689999998777                    5676 699998753

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.36  E-value=4.9  Score=25.18  Aligned_cols=36  Identities=19%  Similarity=0.140  Sum_probs=31.9

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|++++++|..+.+..++++.+...|+++.+.+-.
T Consensus         2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            579999999999999999999999999998877653

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=80.35  E-value=0.43  Score=30.58  Aligned_cols=24  Identities=17%  Similarity=0.307  Sum_probs=20.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeE
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTV   39 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v   39 (167)
                      ++|.|+ |.+|.++|..|.+.|.++
T Consensus         6 VvIIGg-G~~G~e~A~~l~~~g~~v   29 (183)
T d1d7ya1           6 VVVLGA-GLASVSFVAELRQAGYQG   29 (183)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCS
T ss_pred             EEEECc-cHHHHHHHHHHHhcCCce
Confidence            888886 799999999999999764

>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, beta chain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=80.20  E-value=5.5  Score=30.13  Aligned_cols=81  Identities=9%  Similarity=0.045  Sum_probs=51.5

Q ss_pred             CCCcEEEEEcCCCchhHHHHHHHHHcCCeEEEE-ec--ChhhHHHHHHHHHhhc-CCcEEEEEeecCCHHHHHHHHHHHH
Q 031016           10 SCRGIAAIVGVGPNLGRSIARKFAHEGYTVAIL-AR--DLGRLSRFADEIAREE-KSQVFAIRIDCSDSRSVREAFEGVL   85 (167)
Q Consensus        10 ~~~~~~lItGa~~~iG~~~a~~l~~~g~~v~~~-~r--~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   85 (167)
                      +.+|.+.|.|. .....++++.|.+.|..++.+ ..  +....+++.+.+.... +.+...+  .-.|..++++.+.+. 
T Consensus       358 l~GkrvaI~gd-~~~~~~la~fL~ElG~e~~~v~~~~~~~~~~~~~~~~l~~~~~g~~~~v~--~~~Dl~~l~~~i~~~-  433 (519)
T d1qh8b_         358 LHGKKFGLYGD-PDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVF--INCDLWHFRSLMFTR-  433 (519)
T ss_dssp             HTTCEEEEESC-HHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEE--ESCCHHHHHHHHHHH-
T ss_pred             cCCcEEEEECC-cHHHHHHHHHHHHcCCeeeEEEecCCCHHHHHHHHHHHHhCcCCCCCEEE--ECCCHHHHHHHHhhc-
Confidence            36899999876 578888999999999976444 22  2333344455554422 2334433  344667787777664 


Q ss_pred             hcCCccEEEEcC
Q 031016           86 SLGFVEVLVYNA   97 (167)
Q Consensus        86 ~~~~i~~lv~~a   97 (167)
                         ++|.+|-+.
T Consensus       434 ---~pDLliG~s  442 (519)
T d1qh8b_         434 ---QPDFMIGNS  442 (519)
T ss_dssp             ---CCSEEEECT
T ss_pred             ---CCCEEEECC
Confidence               689888663

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.06  E-value=1.1  Score=29.29  Aligned_cols=30  Identities=27%  Similarity=0.307  Sum_probs=25.9

Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeEEEEecC
Q 031016           15 AAIVGVGPNLGRSIARKFAHEGYTVAILARD   45 (167)
Q Consensus        15 ~lItGa~~~iG~~~a~~l~~~g~~v~~~~r~   45 (167)
                      ++|.|+ |..|...|..+++.|.+|+++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            677886 678999999999999999999764