BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031020
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23264|SEBP1_ARATH Selenium-binding protein 1 OS=Arabidopsis thaliana GN=SBP1 PE=1
SV=1
Length = 490
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 136/167 (81%), Positives = 152/167 (91%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITDFLISLDDRF+YF NWLHGDIRQYNIEDPKNPVLTGQIWVGGL +KGSPV AV
Sbjct: 324 MPGLITDFLISLDDRFIYFVNWLHGDIRQYNIEDPKNPVLTGQIWVGGLLQKGSPVKAVG 383
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
+DG +Q +VP+++G LRGGPQMIQLSLDGKRLY TNSLFSAWD QFYPE+ EKGSH++
Sbjct: 384 EDGNTFQFEVPQIKGKSLRGGPQMIQLSLDGKRLYATNSLFSAWDRQFYPEIMEKGSHII 443
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV++EKGG+ INP+FFVDF EPDGP+LAHEMRYPGGDCTSDIWI
Sbjct: 444 QIDVDTEKGGLTINPDFFVDFGDEPDGPSLAHEMRYPGGDCTSDIWI 490
>sp|Q93WN0|SEBP2_ARATH Selenium-binding protein 2 OS=Arabidopsis thaliana GN=SBP2 PE=2
SV=1
Length = 487
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 149/167 (89%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITDFLISLDDRF YF NWLHGDIRQYNIEDPKNPVLTGQIWVGGL +KGSP AV
Sbjct: 321 MPGLITDFLISLDDRFFYFVNWLHGDIRQYNIEDPKNPVLTGQIWVGGLLQKGSPYKAVG 380
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
+DG YQ DVP+++G LR GPQMIQLSLDGKRLY TNSLFSAWD QFYPE+ EKGSH++
Sbjct: 381 EDGNTYQFDVPQIKGKSLRAGPQMIQLSLDGKRLYATNSLFSAWDRQFYPEIMEKGSHII 440
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV+++KGG+ +NP+FFVDF EPDGPALAHEMRYPGGDCTSDIWI
Sbjct: 441 QIDVDTDKGGLTLNPDFFVDFGDEPDGPALAHEMRYPGGDCTSDIWI 487
>sp|Q9LK38|SEBP3_ARATH Selenium-binding protein 3 OS=Arabidopsis thaliana GN=SBP3 PE=2
SV=1
Length = 480
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 152/167 (91%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITDFLISLDDRFLY SNWLHGDIRQYNIEDPK PVLTGQI VGGL +KGS V+A+
Sbjct: 314 MPGLITDFLISLDDRFLYCSNWLHGDIRQYNIEDPKTPVLTGQIHVGGLVQKGSLVLALG 373
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
++G+ +Q DVP+++G RLRGGPQM QLSLDGKRLYVTNSLFS WD QFYPEL EKGSHML
Sbjct: 374 EEGKAFQFDVPKIKGQRLRGGPQMFQLSLDGKRLYVTNSLFSVWDRQFYPELVEKGSHML 433
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV+++KGG++INPNFFVDF EPDGP+LAHEMRYPGGDCTSDIW+
Sbjct: 434 QIDVDTDKGGLSINPNFFVDFGTEPDGPSLAHEMRYPGGDCTSDIWV 480
>sp|Q569D5|SBP1_XENTR Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2
SV=1
Length = 472
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 135/167 (80%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD LISLDDRFLYFSNWLHGDIRQY+I DP+NP L GQI++GG +G PV +
Sbjct: 306 MPGLITDILISLDDRFLYFSNWLHGDIRQYDITDPRNPKLVGQIFLGGSILRGGPVTVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q D V+G ++ GGPQMIQLSLDGKRLYVTNSL+S WD QFYP++ ++GS ML
Sbjct: 366 DKDLECQPDPVIVKGKKVPGGPQMIQLSLDGKRLYVTNSLYSKWDKQFYPDMIKEGSVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV++EKGG+ +NPNF VDF EP GP LAHE+RYPGGDC+SDIW+
Sbjct: 426 QIDVDTEKGGLKLNPNFLVDFGKEPGGPVLAHELRYPGGDCSSDIWV 472
>sp|Q5RF48|SBP1_PONAB Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1
Length = 472
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 134/167 (80%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD L+SLDDRFLYFSNWLHGD+RQY+I DP+ P LTGQ++VGG KG PV +
Sbjct: 306 MPGLITDILLSLDDRFLYFSNWLHGDLRQYDISDPQRPRLTGQLFVGGSIVKGGPVQVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q + V+G R+ GGPQMIQLSLDGKRLYVT SL+SAWD QFYP+L +GS ML
Sbjct: 366 DQELKSQPEPLVVKGKRVAGGPQMIQLSLDGKRLYVTTSLYSAWDKQFYPDLIREGSVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
Q+DV++ KGG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI
Sbjct: 426 QVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q52KZ7|SBP1A_XENLA Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-a PE=2
SV=1
Length = 472
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 135/167 (80%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD LISLDDRFLYFSNWLHGDIRQY+I D +NP L GQI++GG ++G PV +
Sbjct: 306 MPGLITDILISLDDRFLYFSNWLHGDIRQYDITDTRNPKLVGQIFLGGSIQRGGPVTVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q D V+G + GGPQMIQLSLDGKR+YVT+SL+S WD QFYP+L ++G+ ML
Sbjct: 366 DKELECQPDPVTVKGKIIPGGPQMIQLSLDGKRIYVTSSLYSIWDKQFYPDLLKEGAVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV+++KGG+ +NPNF VDF EPDGP LAHE+RYPGGDCTSDIWI
Sbjct: 426 QIDVDTKKGGLKLNPNFLVDFGKEPDGPVLAHEIRYPGGDCTSDIWI 472
>sp|Q13228|SBP1_HUMAN Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2
Length = 472
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 135/167 (80%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD L+SLDDRFLYFSNWLHGD+RQY+I DP+ P LTGQ+++GG KG PV +
Sbjct: 306 MPGLITDILLSLDDRFLYFSNWLHGDLRQYDISDPQRPRLTGQLFLGGSIVKGGPVQVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D+ Q + V+G R+ GGPQMIQLSLDGKRLY+T SL+SAWD QFYP+L +GS ML
Sbjct: 366 DEELKSQPEPLVVKGKRVAGGPQMIQLSLDGKRLYITTSLYSAWDKQFYPDLIREGSVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
Q+DV++ KGG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI
Sbjct: 426 QVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q6DCH7|SBP1B_XENLA Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-b PE=2
SV=1
Length = 472
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 134/167 (80%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD LISLDDRFLYFSNWLHGDIRQY+I + +NP L GQI++GG +KG PV
Sbjct: 306 MPGLITDILISLDDRFLYFSNWLHGDIRQYDITNIRNPKLVGQIFLGGSIQKGGPVAVQE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q D V+G + GGPQMIQLSLDGKR+YVT+S++S WD QFYP++ ++G+ ML
Sbjct: 366 DKELECQPDPVTVKGKIIPGGPQMIQLSLDGKRIYVTSSIYSIWDKQFYPDMLKEGAVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV++EKGG+ +NPNF VDF EPDGP LAHE+RYPGGDC+SDIWI
Sbjct: 426 QIDVDTEKGGLKLNPNFLVDFGKEPDGPVLAHELRYPGGDCSSDIWI 472
>sp|Q8VIF7|SBP1_RAT Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1
SV=1
Length = 472
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 131/167 (78%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD L+SLDDRFLYFSNWLHGDIRQY+I +PK P LTGQI++GG KG V +
Sbjct: 306 MPGLITDILLSLDDRFLYFSNWLHGDIRQYDISNPKKPRLTGQIFLGGSIVKGGSVQVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q + V+G R+ GGPQMIQLSLDGKRLYVT SL+SAWD QFYP L +GS ML
Sbjct: 366 DQELTCQPEPLVVKGKRVPGGPQMIQLSLDGKRLYVTTSLYSAWDKQFYPNLIREGSVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV++ GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI
Sbjct: 426 QIDVDTANGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q2KJ32|SBP1_BOVIN Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1
Length = 472
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 131/167 (78%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MP LITD L+SLDDRFLYFSNWLHGD+RQY+I DPK P L GQI++GG KG PV +
Sbjct: 306 MPSLITDILLSLDDRFLYFSNWLHGDLRQYDISDPKRPRLVGQIFLGGSIVKGGPVQVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q + V+G R+ GGPQMIQLSLDG RLYVT SL+SAWD QFYP+L +GS ML
Sbjct: 366 DQELKCQPEPLVVKGKRVAGGPQMIQLSLDGTRLYVTTSLYSAWDKQFYPDLIREGSVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV++ +GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIW+
Sbjct: 426 QIDVDTVRGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWL 472
>sp|P17563|SBP1_MOUSE Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2
Length = 472
Score = 229 bits (585), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 130/167 (77%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD L+SLDDRFLYFSNWLHGDIRQY+I +P+ P L GQI++GG +G V +
Sbjct: 306 MPGLITDILLSLDDRFLYFSNWLHGDIRQYDISNPQKPRLAGQIFLGGSIVRGGSVQVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q + V+G R+ GGPQMIQLSLDGKRLY T SL+SAWD QFYP+L +GS ML
Sbjct: 366 DQELTCQPEPLVVKGKRIPGGPQMIQLSLDGKRLYATTSLYSAWDKQFYPDLIREGSMML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
QIDV++ GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI
Sbjct: 426 QIDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q63836|SBP2_MOUSE Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2
Length = 472
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 130/167 (77%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD L+SLDDRFLYFSNWLHGDIRQY+I +P+ P LTGQI++GG +G V +
Sbjct: 306 MPGLITDILLSLDDRFLYFSNWLHGDIRQYDISNPQKPRLTGQIFLGGSIVRGGSVQVLE 365
Query: 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHML 120
D Q + V+G R+ GGPQMIQLSLDGKRLY T SL+S WD QFYP+L +GS ML
Sbjct: 366 DQELTCQPEPLVVKGKRIPGGPQMIQLSLDGKRLYATTSLYSDWDKQFYPDLIREGSVML 425
Query: 121 QIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
Q+DV++ GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI
Sbjct: 426 QVDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
>sp|Q6PHD9|SBP1_DANRE Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1
Length = 457
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 122/170 (71%), Gaps = 22/170 (12%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MPGLITD LISLDDRFLYFSNWLHGDIRQY+I D KNP + GQ+++GG K PV +
Sbjct: 307 MPGLITDILISLDDRFLYFSNWLHGDIRQYDITDRKNPRMVGQVFLGGSVLKDGPVKVLE 366
Query: 61 D---DGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGS 117
D D QP P + L GKRLYVT SL+SAWD QFYP+L ++GS
Sbjct: 367 DKELDSQP----TPRI---------------LKGKRLYVTTSLYSAWDKQFYPDLIKEGS 407
Query: 118 HMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
M+QIDVN++ GG+ +N NF VDF AEP+GPALAHE+RYPGGDCTSDIW+
Sbjct: 408 VMMQIDVNTDTGGLKLNENFLVDFGAEPEGPALAHELRYPGGDCTSDIWL 457
>sp|Q21950|SBP_CAEEL Putative selenium-binding protein OS=Caenorhabditis elegans
GN=R11G10.2 PE=3 SV=2
Length = 542
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 107/174 (61%), Gaps = 11/174 (6%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MP L+TD +IS+DDR+LY +LHG + +++I+DP L G+I +GG+F V T
Sbjct: 373 MPALLTDMIISMDDRWLYVCGFLHGVLWRFDIQDPFRVSLHGKINLGGIFDSFPEVRIKT 432
Query: 61 DDGQ-------PYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELK 113
+ P +P +G + RGGP ++QLS DG RLYV NS + AWD QFYPEL
Sbjct: 433 SNAMEDRWWLPPETRSLP--RGTKFRGGPALMQLSKDGCRLYVCNSFYKAWDAQFYPELI 490
Query: 114 EKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
G M+++D+ ++ M +N F +D + +P+GP + ++++ GDCTSD ++
Sbjct: 491 SDGGQMIRVDIVDDE--MQLNEKFLIDMKGQPNGPFVIRDIKFLDGDCTSDSFL 542
>sp|A8X2U9|SBP_CAEBR Putative selenium-binding protein OS=Caenorhabditis briggsae
GN=CBG06685 PE=3 SV=2
Length = 514
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 11/174 (6%)
Query: 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVT 60
MP L+TD +IS+DDR+LY +LHG + +++I+DP L G+I +GG+F V T
Sbjct: 345 MPALLTDMIISMDDRWLYVCGFLHGIVWRFDIQDPFRVSLHGKINLGGVFDSSPEVRIKT 404
Query: 61 DDGQ-------PYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELK 113
+ P +P +G + RGGP ++QLS DG RLYV NS + AWD QFYPEL
Sbjct: 405 SNAMEDRWWLPPETRSLP--RGTKFRGGPALMQLSKDGSRLYVCNSFYKAWDGQFYPELI 462
Query: 114 EKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 167
G M+++D+ + M +N F VD + +P+GP + ++++ GDCTSD ++
Sbjct: 463 SDGGQMVRVDIVDNE--MRLNKKFLVDMKDQPNGPFVIRDIKFLDGDCTSDSFL 514
>sp|C0R112|SYI_BRAHW Isoleucine--tRNA ligase OS=Brachyspira hyodysenteriae (strain ATCC
49526 / WA1) GN=ileS PE=3 SV=1
Length = 923
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 53 GSPVVAVTDDGQPYQSDVPEVQGHRLR-GGPQMIQLSLDGKRLY----VTNSLFSAWDCQ 107
G + D Y SD PE+QG ++R P+++++ + LY VT+S W C+
Sbjct: 345 GLEIYCPVDKAGRYTSDFPEMQGMKVRDANPKVVEILENNGSLYHKEKVTHSYPICWRCK 404
>sp|Q54CB2|XPO6_DICDI Exportin-6 OS=Dictyostelium discoideum GN=xpo6 PE=3 SV=1
Length = 1047
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 107 QFYPELKEKGSHMLQIDVNSEKGGMAINPNF 137
Q++PE K + +QI +N+ G + NPNF
Sbjct: 329 QYHPEFLNKFTQFIQIFINNHLGRIETNPNF 359
>sp|A5IND6|MINC_THEP1 Probable septum site-determining protein MinC OS=Thermotoga
petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)
GN=minC PE=3 SV=1
Length = 210
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 27 IRQY-NIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMI 85
IR Y N+E+ N + +GG F KG + + ++ + D+P++ H G ++
Sbjct: 15 IRDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPKIVSHLRNLGLEVS 74
Query: 86 QL 87
Q+
Sbjct: 75 QI 76
>sp|O29003|Y1265_ARCFU UPF0173 metal-dependent hydrolase AF_1265 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=AF_1265 PE=3 SV=1
Length = 231
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 46 VGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG-PQMIQLSLDGKRLYVTNSLFSAW 104
+GG R GS +AVT + +D+ + QG+ + G P +S+DG R+Y T
Sbjct: 89 MGGTARTGS--IAVTMVPAWHSADLEDEQGNIISAGLPAGFIVSMDGVRVYHTGDTDVFL 146
Query: 105 DCQFYPELKEKGSHMLQI 122
D Q EL +L I
Sbjct: 147 DMQLIGELHRPDVMLLPI 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.142 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,497,154
Number of Sequences: 539616
Number of extensions: 3322418
Number of successful extensions: 5285
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5261
Number of HSP's gapped (non-prelim): 22
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)