Query 031020
Match_columns 167
No_of_seqs 159 out of 443
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 12:35:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ece_A 462AA long hypothetical 100.0 4.4E-55 1.5E-59 395.9 15.2 141 2-167 320-460 (462)
2 3hfq_A Uncharacterized protein 99.4 7.4E-13 2.5E-17 105.6 11.2 83 4-132 241-323 (347)
3 3scy_A Hypothetical bacterial 99.4 7.6E-12 2.6E-16 100.6 13.0 82 5-133 261-344 (361)
4 1ri6_A Putative isomerase YBHE 99.2 3.5E-10 1.2E-14 87.7 12.8 87 4-137 232-319 (343)
5 2mad_H Methylamine dehydrogena 99.1 2.7E-10 9.3E-15 96.8 10.8 66 7-99 70-144 (373)
6 1jof_A Carboxy-CIS,CIS-muconat 99.1 7.1E-10 2.4E-14 90.7 12.5 85 4-132 146-230 (365)
7 3scy_A Hypothetical bacterial 99.1 1.1E-09 3.8E-14 88.0 12.5 89 5-137 213-302 (361)
8 2oiz_A Aromatic amine dehydrog 99.0 6.4E-10 2.2E-14 92.7 9.1 65 7-99 54-127 (361)
9 3sjl_D Methylamine dehydrogena 99.0 7.2E-10 2.5E-14 97.5 9.0 64 7-99 82-156 (386)
10 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.7E-09 5.8E-14 88.4 10.6 78 4-127 255-342 (365)
11 3u4y_A Uncharacterized protein 99.0 4.1E-09 1.4E-13 82.6 12.3 64 4-99 177-240 (331)
12 1mda_H Methylamine dehydrogena 99.0 6E-10 2.1E-14 96.4 7.3 67 7-100 69-144 (368)
13 3c75_H MADH, methylamine dehyd 99.0 7.8E-10 2.7E-14 97.9 8.1 66 7-99 122-196 (426)
14 3hfq_A Uncharacterized protein 99.0 1.5E-08 5.3E-13 80.6 14.1 82 5-132 143-224 (347)
15 3vgz_A Uncharacterized protein 98.8 4.4E-08 1.5E-12 76.7 11.9 75 4-131 232-306 (353)
16 3vgz_A Uncharacterized protein 98.8 4.7E-08 1.6E-12 76.5 11.0 78 6-123 275-352 (353)
17 1qks_A Cytochrome CD1 nitrite 98.8 3.5E-08 1.2E-12 89.4 11.7 62 4-99 198-263 (567)
18 1nir_A Nitrite reductase; hemo 98.7 7.4E-08 2.5E-12 85.4 11.6 61 5-99 181-245 (543)
19 1ri6_A Putative isomerase YBHE 98.7 9.5E-08 3.2E-12 74.0 10.5 84 4-132 130-215 (343)
20 2oiz_A Aromatic amine dehydrog 98.7 9.9E-08 3.4E-12 79.4 10.8 74 8-136 259-342 (361)
21 3u4y_A Uncharacterized protein 98.7 2.3E-07 7.8E-12 72.7 11.0 65 4-99 129-195 (331)
22 3c75_H MADH, methylamine dehyd 98.6 1.2E-07 4.2E-12 83.8 9.4 72 8-131 324-405 (426)
23 1qks_A Cytochrome CD1 nitrite 98.6 2.2E-07 7.4E-12 84.2 10.9 103 4-131 241-376 (567)
24 3sjl_D Methylamine dehydrogena 98.6 1E-07 3.5E-12 83.8 8.4 56 8-99 38-97 (386)
25 2ece_A 462AA long hypothetical 98.6 2.5E-07 8.4E-12 84.0 11.1 41 4-47 189-247 (462)
26 1nir_A Nitrite reductase; hemo 98.6 4.2E-07 1.4E-11 80.6 11.7 63 4-99 281-343 (543)
27 2mad_H Methylamine dehydrogena 98.6 6E-07 2E-11 76.2 12.1 72 8-131 272-353 (373)
28 1jmx_B Amine dehydrogenase; ox 98.6 8.5E-07 2.9E-11 69.0 11.7 71 4-130 256-327 (349)
29 1mda_H Methylamine dehydrogena 98.5 1.7E-07 5.9E-12 81.0 7.7 85 8-147 269-361 (368)
30 3dsm_A Uncharacterized protein 98.5 4E-07 1.4E-11 74.2 9.4 70 3-106 172-251 (328)
31 1jmx_B Amine dehydrogenase; ox 98.5 8.6E-07 3E-11 69.0 10.5 68 4-99 44-111 (349)
32 3tc9_A Hypothetical hydrolase; 98.5 7.4E-07 2.5E-11 77.1 10.6 107 5-159 228-336 (430)
33 1pby_B Quinohemoprotein amine 98.5 1.8E-06 6.1E-11 66.6 11.3 66 4-98 35-100 (337)
34 2iwa_A Glutamine cyclotransfer 98.4 7.2E-07 2.5E-11 74.8 9.2 54 9-98 70-123 (266)
35 1pby_B Quinohemoprotein amine 98.4 2.8E-06 9.7E-11 65.5 11.5 72 4-131 242-313 (337)
36 3g4e_A Regucalcin; six bladed 98.4 1.2E-06 4E-11 70.0 9.5 45 82-142 151-195 (297)
37 1npe_A Nidogen, entactin; glyc 98.4 1.1E-06 3.8E-11 68.7 8.8 62 4-99 123-186 (267)
38 1fwx_A Nitrous oxide reductase 98.4 2.8E-07 9.6E-12 85.8 6.3 64 4-100 278-350 (595)
39 1l0q_A Surface layer protein; 98.4 4.5E-06 1.6E-10 66.7 11.7 61 4-99 117-177 (391)
40 2iwa_A Glutamine cyclotransfer 98.4 2.3E-06 8E-11 71.6 10.2 86 5-128 154-239 (266)
41 3dsm_A Uncharacterized protein 98.4 3.9E-07 1.3E-11 74.3 5.4 98 4-156 226-325 (328)
42 1l0q_A Surface layer protein; 98.3 6.8E-06 2.3E-10 65.7 11.7 62 3-99 74-135 (391)
43 1fwx_A Nitrous oxide reductase 98.3 3E-06 1E-10 78.9 10.6 105 5-147 333-448 (595)
44 3g4e_A Regucalcin; six bladed 98.2 7.6E-06 2.6E-10 65.2 10.2 82 4-131 150-232 (297)
45 3kya_A Putative phosphatase; s 98.2 2.9E-06 9.8E-11 77.0 8.4 108 5-158 249-375 (496)
46 2p4o_A Hypothetical protein; p 98.2 5.5E-06 1.9E-10 66.7 9.2 56 11-99 175-230 (306)
47 4hw6_A Hypothetical protein, I 98.2 6.6E-06 2.3E-10 71.5 9.2 81 5-132 230-310 (433)
48 3bws_A Protein LP49; two-domai 98.2 1.9E-05 6.6E-10 63.9 11.2 62 3-99 303-364 (433)
49 3bws_A Protein LP49; two-domai 98.1 2.5E-05 8.7E-10 63.2 11.6 73 3-125 345-431 (433)
50 1npe_A Nidogen, entactin; glyc 98.1 1.9E-05 6.3E-10 61.7 10.3 62 4-99 80-141 (267)
51 1pjx_A Dfpase, DIISOPROPYLFLUO 98.1 2.1E-05 7.1E-10 61.0 9.2 73 3-125 226-298 (314)
52 3fvz_A Peptidyl-glycine alpha- 98.0 4.9E-05 1.7E-09 61.4 11.4 101 5-126 198-322 (329)
53 1ijq_A LDL receptor, low-densi 98.0 2.1E-05 7E-10 64.5 9.2 62 4-99 121-183 (316)
54 2p4o_A Hypothetical protein; p 98.0 1.2E-05 4.1E-10 64.7 7.0 81 4-124 213-298 (306)
55 3v64_C Agrin; beta propeller, 98.0 2.8E-05 9.5E-10 65.1 8.6 62 4-99 160-222 (349)
56 3v65_B Low-density lipoprotein 97.9 3.8E-05 1.3E-09 65.1 9.1 62 4-99 203-265 (386)
57 2fp8_A Strictosidine synthase; 97.9 5.1E-05 1.8E-09 60.9 8.7 62 4-99 186-247 (322)
58 3mbr_X Glutamine cyclotransfer 97.9 7.4E-05 2.5E-09 62.3 9.5 54 8-98 68-121 (243)
59 2qe8_A Uncharacterized protein 97.9 5.6E-05 1.9E-09 61.7 8.6 79 4-99 121-214 (343)
60 3dr2_A Exported gluconolactona 97.9 0.00023 8E-09 56.6 12.0 31 4-34 189-224 (305)
61 2dg1_A DRP35, lactonase; beta 97.8 0.00015 5E-09 57.2 10.6 82 4-125 234-315 (333)
62 3p5b_L Low density lipoprotein 97.8 8.4E-05 2.9E-09 63.5 9.7 61 5-99 204-265 (400)
63 3nok_A Glutaminyl cyclase; bet 97.8 5.5E-05 1.9E-09 64.3 8.4 53 9-98 100-152 (268)
64 2ghs_A AGR_C_1268P; regucalcin 97.8 0.00017 5.7E-09 58.6 10.5 33 82-129 181-213 (326)
65 3fvz_A Peptidyl-glycine alpha- 97.8 0.00015 5.3E-09 58.4 10.2 86 4-131 144-230 (329)
66 3sov_A LRP-6, low-density lipo 97.8 9.4E-05 3.2E-09 61.6 8.9 62 4-99 123-185 (318)
67 3nol_A Glutamine cyclotransfer 97.8 0.00015 5.2E-09 61.2 10.0 63 13-98 181-243 (262)
68 3mbr_X Glutamine cyclotransfer 97.8 8.9E-05 3E-09 61.8 8.4 64 14-98 159-222 (243)
69 3nol_A Glutamine cyclotransfer 97.7 7.8E-05 2.7E-09 63.0 7.9 54 8-98 90-143 (262)
70 3e5z_A Putative gluconolactona 97.7 0.00027 9.1E-09 55.2 10.4 72 3-132 218-290 (296)
71 3sre_A PON1, serum paraoxonase 97.7 0.00018 6.3E-09 62.3 10.1 87 4-124 222-309 (355)
72 3nok_A Glutaminyl cyclase; bet 97.7 0.00011 3.7E-09 62.5 7.9 64 13-98 190-253 (268)
73 2ism_A Putative oxidoreductase 97.7 0.00048 1.6E-08 57.7 11.7 63 4-99 32-97 (352)
74 3sre_A PON1, serum paraoxonase 97.6 0.00024 8.1E-09 61.6 9.7 48 82-147 223-270 (355)
75 1rwi_B Serine/threonine-protei 97.6 0.00014 4.7E-09 55.3 7.0 71 4-125 193-263 (270)
76 2ghs_A AGR_C_1268P; regucalcin 97.6 0.00025 8.4E-09 57.6 8.9 61 3-99 230-291 (326)
77 1ijq_A LDL receptor, low-densi 97.6 0.00042 1.5E-08 56.7 10.3 100 4-157 165-264 (316)
78 2vdu_B TRNA (guanine-N(7)-)-me 97.6 0.00044 1.5E-08 57.5 10.3 89 4-134 309-399 (450)
79 1pjx_A Dfpase, DIISOPROPYLFLUO 97.6 0.00029 9.9E-09 54.5 8.3 30 4-33 173-206 (314)
80 3v65_B Low-density lipoprotein 97.6 0.00034 1.2E-08 59.2 9.4 99 4-158 247-345 (386)
81 3v64_C Agrin; beta propeller, 97.5 0.00062 2.1E-08 56.8 10.6 98 4-159 204-303 (349)
82 1rwi_B Serine/threonine-protei 97.5 0.00023 7.8E-09 54.0 7.3 60 4-99 109-168 (270)
83 3hrp_A Uncharacterized protein 97.5 0.00046 1.6E-08 58.9 9.9 86 7-131 271-357 (409)
84 2dg1_A DRP35, lactonase; beta 97.5 0.00078 2.7E-08 53.0 10.4 18 82-99 184-201 (333)
85 2vdu_B TRNA (guanine-N(7)-)-me 97.5 0.00088 3E-08 55.7 11.0 66 4-99 104-169 (450)
86 1q7f_A NHL, brain tumor CG1071 97.5 0.00059 2E-08 52.7 9.2 61 4-99 122-182 (286)
87 2fp8_A Strictosidine synthase; 97.5 0.0008 2.7E-08 53.9 10.3 18 82-99 187-204 (322)
88 3hrp_A Uncharacterized protein 97.5 0.00038 1.3E-08 59.4 8.7 83 5-124 325-408 (409)
89 2ojh_A Uncharacterized protein 97.5 0.00055 1.9E-08 50.9 8.6 62 3-98 42-103 (297)
90 1q7f_A NHL, brain tumor CG1071 97.5 0.001 3.5E-08 51.3 10.3 60 4-98 208-268 (286)
91 1n7d_A LDL receptor, low-densi 97.5 6.5E-05 2.2E-09 69.3 4.0 61 5-99 498-559 (699)
92 3sov_A LRP-6, low-density lipo 97.5 0.001 3.5E-08 55.3 10.9 100 4-159 167-266 (318)
93 3e5z_A Putative gluconolactona 97.4 0.00055 1.9E-08 53.4 8.4 61 4-98 173-235 (296)
94 2ism_A Putative oxidoreductase 97.4 0.00046 1.6E-08 57.8 8.3 91 4-125 76-177 (352)
95 4h5i_A Guanine nucleotide-exch 97.4 0.0016 5.6E-08 53.4 11.5 59 5-98 136-195 (365)
96 1gxr_A ESG1, transducin-like e 97.4 0.0014 4.9E-08 50.1 10.3 65 3-98 52-116 (337)
97 3m0c_C LDL receptor, low-densi 97.4 0.0005 1.7E-08 65.1 9.2 61 5-99 516-577 (791)
98 3m0c_C LDL receptor, low-densi 97.4 0.001 3.4E-08 63.0 11.2 99 4-158 559-659 (791)
99 4a0p_A LRP6, LRP-6, low-densit 97.4 0.0007 2.4E-08 61.9 9.8 60 5-99 125-185 (628)
100 3amr_A 3-phytase; beta-propell 97.4 0.0011 3.7E-08 58.4 10.5 74 7-129 132-213 (355)
101 3dr2_A Exported gluconolactona 97.4 0.0017 5.8E-08 51.6 10.8 34 82-125 190-223 (305)
102 1n7d_A LDL receptor, low-densi 97.4 0.00025 8.5E-09 65.4 6.8 100 4-157 541-640 (699)
103 2qe8_A Uncharacterized protein 97.4 0.0019 6.4E-08 52.6 11.3 67 4-99 68-139 (343)
104 2xyi_A Probable histone-bindin 97.4 0.00048 1.6E-08 57.3 7.6 66 3-99 322-398 (430)
105 3a9g_A Putative uncharacterize 97.4 0.0019 6.5E-08 54.4 11.3 63 4-99 30-95 (354)
106 2ojh_A Uncharacterized protein 97.3 0.0013 4.4E-08 48.9 9.0 62 5-99 131-192 (297)
107 3p5b_L Low density lipoprotein 97.3 0.0011 3.9E-08 56.4 9.7 98 4-157 247-346 (400)
108 3azo_A Aminopeptidase; POP fam 97.3 0.001 3.5E-08 57.6 9.3 30 4-33 189-225 (662)
109 2qc5_A Streptogramin B lactona 97.3 0.002 6.9E-08 48.9 9.4 69 4-125 231-299 (300)
110 3a9g_A Putative uncharacterize 97.3 0.0016 5.6E-08 54.8 9.8 88 4-126 74-178 (354)
111 2g8s_A Glucose/sorbosone dehyd 97.2 0.001 3.6E-08 55.8 8.5 92 4-132 19-113 (353)
112 3qqz_A Putative uncharacterize 97.2 0.0053 1.8E-07 50.8 12.1 76 1-126 22-100 (255)
113 2ecf_A Dipeptidyl peptidase IV 97.1 0.0023 8E-08 56.0 9.7 86 3-98 37-127 (741)
114 4h5i_A Guanine nucleotide-exch 97.1 0.0053 1.8E-07 50.4 11.3 72 4-125 271-342 (365)
115 2ecf_A Dipeptidyl peptidase IV 97.1 0.00089 3E-08 58.7 7.0 60 5-98 111-170 (741)
116 2hqs_A Protein TOLB; TOLB, PAL 97.1 0.0065 2.2E-07 50.9 11.8 62 3-99 179-242 (415)
117 3s94_A LRP-6, low-density lipo 97.1 0.0012 3.9E-08 60.3 7.5 61 5-99 129-190 (619)
118 2hqs_A Protein TOLB; TOLB, PAL 97.1 0.0036 1.2E-07 52.5 9.9 62 2-98 222-285 (415)
119 3tc9_A Hypothetical hydrolase; 97.0 0.0025 8.4E-08 55.0 8.7 61 4-98 180-244 (430)
120 3i2n_A WD repeat-containing pr 97.0 0.0049 1.7E-07 47.6 9.5 35 3-37 260-294 (357)
121 3zwl_B Eukaryotic translation 97.0 0.011 3.6E-07 45.6 11.3 61 3-98 33-93 (369)
122 2qc5_A Streptogramin B lactona 97.0 0.0054 1.8E-07 46.5 9.5 28 4-32 147-174 (300)
123 1gxr_A ESG1, transducin-like e 97.0 0.011 3.9E-07 45.0 11.1 60 3-98 184-243 (337)
124 3pe7_A Oligogalacturonate lyas 96.9 0.0021 7.2E-08 51.1 7.1 28 7-34 40-69 (388)
125 2g8s_A Glucose/sorbosone dehyd 96.9 0.0054 1.8E-07 51.4 9.9 93 5-126 68-173 (353)
126 1k32_A Tricorn protease; prote 96.9 0.0015 5.1E-08 61.1 7.0 85 3-142 557-657 (1045)
127 3mmy_A MRNA export factor; mRN 96.9 0.0072 2.5E-07 46.6 9.7 61 4-99 275-335 (368)
128 2z2n_A Virginiamycin B lyase; 96.9 0.0089 3E-07 45.3 10.0 70 4-124 184-253 (299)
129 3zwl_B Eukaryotic translation 96.9 0.015 5.2E-07 44.7 11.5 61 3-99 75-135 (369)
130 3o4h_A Acylamino-acid-releasin 96.9 0.0028 9.5E-08 54.5 7.9 75 6-132 153-231 (582)
131 2aq5_A Coronin-1A; WD40 repeat 96.8 0.0056 1.9E-07 49.6 9.0 63 5-99 223-287 (402)
132 4aow_A Guanine nucleotide-bind 96.8 0.037 1.3E-06 42.5 13.1 31 3-34 216-246 (340)
133 4a0p_A LRP6, LRP-6, low-densit 96.8 0.013 4.4E-07 53.6 12.0 96 4-158 167-264 (628)
134 2gop_A Trilobed protease; beta 96.8 0.0088 3E-07 46.9 9.4 30 5-34 61-94 (347)
135 1k8k_C P40, ARP2/3 complex 41 96.8 0.026 8.8E-07 43.9 12.0 64 3-99 53-116 (372)
136 2z2n_A Virginiamycin B lyase; 96.8 0.0092 3.2E-07 45.2 9.1 29 3-32 225-253 (299)
137 4aez_A CDC20, WD repeat-contai 96.8 0.022 7.5E-07 46.4 11.9 64 3-98 304-368 (401)
138 3vu4_A KMHSV2; beta-propeller 96.7 0.021 7.1E-07 46.3 11.5 63 3-98 196-259 (355)
139 3kya_A Putative phosphatase; s 96.7 0.0066 2.2E-07 55.1 9.2 72 5-125 188-277 (496)
140 1cru_A Protein (soluble quinop 96.7 0.037 1.3E-06 48.5 13.8 120 4-156 28-151 (454)
141 4aow_A Guanine nucleotide-bind 96.7 0.024 8.1E-07 43.6 11.1 66 3-98 39-105 (340)
142 2z3z_A Dipeptidyl aminopeptida 96.7 0.0062 2.1E-07 53.2 8.6 59 6-99 313-375 (706)
143 2ynn_A Coatomer subunit beta'; 96.7 0.017 5.6E-07 45.5 10.3 61 3-98 14-74 (304)
144 3ow8_A WD repeat-containing pr 96.7 0.025 8.5E-07 45.4 11.4 60 4-98 166-225 (321)
145 2xyi_A Probable histone-bindin 96.6 0.0064 2.2E-07 50.4 8.1 66 3-99 232-297 (430)
146 3s94_A LRP-6, low-density lipo 96.6 0.0098 3.4E-07 54.2 9.8 62 5-99 42-103 (619)
147 2ymu_A WD-40 repeat protein; u 96.6 0.0048 1.6E-07 51.8 7.1 59 4-98 18-76 (577)
148 3pe7_A Oligogalacturonate lyas 96.6 0.0084 2.9E-07 47.6 8.0 31 3-33 188-224 (388)
149 1xfd_A DIP, dipeptidyl aminope 96.5 0.0059 2E-07 53.2 7.4 62 5-98 63-132 (723)
150 1sq9_A Antiviral protein SKI8; 96.5 0.028 9.5E-07 44.5 10.6 39 3-45 292-330 (397)
151 3azo_A Aminopeptidase; POP fam 96.5 0.0056 1.9E-07 53.0 7.0 31 4-34 131-170 (662)
152 1got_B GT-beta; complex (GTP-b 96.5 0.031 1.1E-06 44.7 10.9 61 3-98 56-116 (340)
153 4aez_A CDC20, WD repeat-contai 96.5 0.027 9.3E-07 45.8 10.6 61 3-98 260-322 (401)
154 1k8k_C P40, ARP2/3 complex 41 96.5 0.021 7.2E-07 44.4 9.6 78 3-132 203-280 (372)
155 3c5m_A Oligogalacturonate lyas 96.4 0.0081 2.8E-07 47.4 7.1 30 5-34 38-69 (396)
156 2aq5_A Coronin-1A; WD40 repeat 96.4 0.018 6.2E-07 46.6 9.2 64 3-98 132-195 (402)
157 4ery_A WD repeat-containing pr 96.4 0.039 1.3E-06 42.8 10.8 60 4-98 25-84 (312)
158 2xdw_A Prolyl endopeptidase; a 96.4 0.041 1.4E-06 49.0 12.2 59 5-98 127-189 (710)
159 3frx_A Guanine nucleotide-bind 96.4 0.043 1.5E-06 43.5 11.1 59 4-98 198-256 (319)
160 3lrv_A PRE-mRNA-splicing facto 96.4 0.032 1.1E-06 44.3 10.2 31 3-35 215-245 (343)
161 3ei3_B DNA damage-binding prot 96.3 0.03 1E-06 44.6 10.0 64 3-98 205-270 (383)
162 4gqb_B Methylosome protein 50; 96.3 0.016 5.4E-07 47.6 8.4 61 4-99 259-319 (344)
163 2z3z_A Dipeptidyl aminopeptida 96.3 0.019 6.4E-07 50.2 9.1 56 5-98 84-139 (706)
164 4hw6_A Hypothetical protein, I 96.2 0.022 7.6E-07 49.2 9.4 28 6-33 276-303 (433)
165 1k32_A Tricorn protease; prote 96.2 0.024 8.2E-07 53.0 10.2 61 3-98 379-439 (1045)
166 4a11_B DNA excision repair pro 96.2 0.03 1E-06 43.8 9.4 78 3-98 187-264 (408)
167 3f3f_A Nucleoporin SEH1; struc 96.2 0.086 3E-06 39.6 11.5 64 3-98 12-78 (351)
168 4g56_B MGC81050 protein; prote 96.2 0.014 5E-07 47.5 7.7 63 4-98 96-158 (357)
169 1erj_A Transcriptional repress 96.2 0.053 1.8E-06 44.3 11.0 60 4-98 125-184 (393)
170 3mkq_A Coatomer beta'-subunit; 96.2 0.038 1.3E-06 48.4 10.7 62 3-99 14-75 (814)
171 1yfq_A Cell cycle arrest prote 96.2 0.036 1.2E-06 42.7 9.3 64 3-98 12-76 (342)
172 1r5m_A SIR4-interacting protei 96.2 0.047 1.6E-06 42.9 10.1 59 4-98 110-168 (425)
173 3vl1_A 26S proteasome regulato 96.2 0.037 1.2E-06 44.3 9.7 61 3-98 140-200 (420)
174 3ow8_A WD repeat-containing pr 96.2 0.034 1.2E-06 44.6 9.5 59 5-98 125-183 (321)
175 3jrp_A Fusion protein of prote 96.2 0.036 1.2E-06 42.9 9.3 66 3-98 207-275 (379)
176 3ei3_B DNA damage-binding prot 96.1 0.12 4.1E-06 41.1 12.5 92 3-98 251-371 (383)
177 3amr_A 3-phytase; beta-propell 96.1 0.034 1.2E-06 48.8 10.0 67 2-98 179-250 (355)
178 1pgu_A Actin interacting prote 96.1 0.036 1.2E-06 46.2 9.7 63 3-98 19-85 (615)
179 1z68_A Fibroblast activation p 96.1 0.0072 2.5E-07 53.0 5.7 59 5-98 62-128 (719)
180 1nr0_A Actin interacting prote 96.1 0.1 3.6E-06 45.5 12.9 86 4-98 241-343 (611)
181 3k26_A Polycomb protein EED; W 96.1 0.083 2.8E-06 40.7 10.9 64 3-98 116-180 (366)
182 3lrv_A PRE-mRNA-splicing facto 96.0 0.026 8.9E-07 44.9 8.2 62 4-98 172-233 (343)
183 1r5m_A SIR4-interacting protei 96.0 0.065 2.2E-06 42.0 10.3 60 3-98 290-349 (425)
184 3dw8_B Serine/threonine-protei 96.0 0.039 1.3E-06 44.4 9.2 29 4-34 287-315 (447)
185 4ery_A WD repeat-containing pr 96.0 0.079 2.7E-06 41.0 10.7 60 4-98 67-126 (312)
186 1got_B GT-beta; complex (GTP-b 96.0 0.13 4.3E-06 41.1 12.0 63 3-98 227-289 (340)
187 2ynn_A Coatomer subunit beta'; 96.0 0.12 4.3E-06 40.4 11.7 31 3-34 98-128 (304)
188 3c5m_A Oligogalacturonate lyas 96.0 0.053 1.8E-06 42.7 9.5 18 82-99 353-370 (396)
189 3k26_A Polycomb protein EED; W 95.9 0.028 9.6E-07 43.3 7.7 64 5-98 288-354 (366)
190 1xfd_A DIP, dipeptidyl aminope 95.9 0.054 1.8E-06 47.1 10.3 31 4-34 256-289 (723)
191 3fm0_A Protein CIAO1; WDR39,SG 95.9 0.12 4.2E-06 41.4 11.8 62 4-98 63-124 (345)
192 3sbq_A Nitrous-oxide reductase 95.9 0.016 5.4E-07 54.8 7.2 65 2-99 322-396 (638)
193 3vl1_A 26S proteasome regulato 95.9 0.12 4.1E-06 41.2 11.5 31 3-34 182-212 (420)
194 1nr0_A Actin interacting prote 95.9 0.033 1.1E-06 48.7 8.7 60 5-98 451-510 (611)
195 3mmy_A MRNA export factor; mRN 95.8 0.091 3.1E-06 40.3 10.1 63 3-98 40-105 (368)
196 1sq9_A Antiviral protein SKI8; 95.8 0.09 3.1E-06 41.5 10.3 65 3-98 187-252 (397)
197 3fm0_A Protein CIAO1; WDR39,SG 95.8 0.072 2.5E-06 42.7 9.9 63 4-98 107-169 (345)
198 2pm9_A Protein WEB1, protein t 95.8 0.074 2.5E-06 42.1 9.8 61 3-98 263-324 (416)
199 2pbi_B Guanine nucleotide-bind 95.7 0.14 4.9E-06 41.3 11.4 63 3-98 241-303 (354)
200 4gqb_B Methylosome protein 50; 95.7 0.039 1.3E-06 45.3 8.0 31 4-34 171-201 (344)
201 1yfq_A Cell cycle arrest prote 95.7 0.081 2.8E-06 40.7 9.4 73 3-98 194-270 (342)
202 1cru_A Protein (soluble quinop 95.7 0.028 9.5E-07 49.3 7.5 66 6-98 80-161 (454)
203 2xzm_R RACK1; ribosome, transl 95.6 0.11 3.9E-06 41.3 10.3 60 4-98 78-137 (343)
204 2ymu_A WD-40 repeat protein; u 95.6 0.06 2.1E-06 45.1 9.0 60 3-98 58-117 (577)
205 1pgu_A Actin interacting prote 95.6 0.098 3.3E-06 43.6 10.1 65 3-98 161-226 (615)
206 3mkq_A Coatomer beta'-subunit; 95.5 0.089 3E-06 46.1 10.2 62 3-99 56-117 (814)
207 3iz6_a 40S ribosomal protein R 95.5 0.21 7.2E-06 40.5 11.7 67 4-98 251-317 (380)
208 4a11_B DNA excision repair pro 95.5 0.11 3.8E-06 40.6 9.7 87 3-98 246-353 (408)
209 2pm9_A Protein WEB1, protein t 95.5 0.026 9E-07 44.7 6.1 64 3-98 215-282 (416)
210 3sfz_A APAF-1, apoptotic pepti 95.5 0.093 3.2E-06 48.8 10.6 61 3-98 616-676 (1249)
211 4g56_B MGC81050 protein; prote 95.5 0.03 1E-06 45.5 6.6 32 3-34 227-258 (357)
212 1erj_A Transcriptional repress 95.4 0.17 5.7E-06 41.4 10.8 59 4-98 167-226 (393)
213 3i2n_A WD repeat-containing pr 95.4 0.074 2.5E-06 40.9 8.2 32 3-34 19-53 (357)
214 2j04_A TAU60, YPL007P, hypothe 95.4 0.059 2E-06 50.2 8.9 64 3-99 86-149 (588)
215 3odt_A Protein DOA1; ubiquitin 95.4 0.11 3.7E-06 39.2 8.9 59 3-98 226-284 (313)
216 3dwl_C Actin-related protein 2 95.3 0.083 2.9E-06 41.6 8.5 31 3-34 147-177 (377)
217 3das_A Putative oxidoreductase 95.3 0.09 3.1E-06 45.3 9.2 88 5-126 82-183 (347)
218 2oit_A Nucleoporin 214KDA; NH2 95.2 0.035 1.2E-06 47.3 6.5 33 2-34 92-127 (434)
219 3qqz_A Putative uncharacterize 95.2 0.16 5.5E-06 41.9 10.3 68 6-99 73-140 (255)
220 3iz6_a 40S ribosomal protein R 95.2 0.17 5.8E-06 41.1 10.3 64 4-98 300-363 (380)
221 1z68_A Fibroblast activation p 95.2 0.071 2.4E-06 46.7 8.4 29 4-34 111-139 (719)
222 4a5s_A Dipeptidyl peptidase 4 95.1 0.15 5.1E-06 45.7 10.5 26 6-34 20-45 (740)
223 3dwl_C Actin-related protein 2 95.1 0.053 1.8E-06 42.8 6.7 65 3-98 101-165 (377)
224 3sfz_A APAF-1, apoptotic pepti 95.1 0.018 6.3E-07 53.5 4.5 59 3-98 1179-1237(1249)
225 2xzm_R RACK1; ribosome, transl 95.0 0.19 6.4E-06 40.0 9.8 61 3-98 214-274 (343)
226 2pbi_B Guanine nucleotide-bind 95.0 0.12 4.1E-06 41.8 8.8 59 5-98 287-345 (354)
227 3odt_A Protein DOA1; ubiquitin 95.0 0.18 6.3E-06 37.9 9.1 37 3-44 185-221 (313)
228 3o4h_A Acylamino-acid-releasin 94.9 0.045 1.5E-06 46.9 6.3 31 3-34 195-227 (582)
229 2hes_X YDR267CP; beta-propelle 94.9 0.36 1.2E-05 38.4 11.2 30 4-34 60-89 (330)
230 2oit_A Nucleoporin 214KDA; NH2 94.9 0.074 2.5E-06 45.3 7.6 62 4-99 151-212 (434)
231 4ggc_A P55CDC, cell division c 94.9 0.39 1.3E-05 36.3 10.9 56 8-98 31-86 (318)
232 3das_A Putative oxidoreductase 94.9 0.086 2.9E-06 45.4 7.9 65 5-98 34-101 (347)
233 4e54_B DNA damage-binding prot 94.8 0.038 1.3E-06 45.7 5.5 31 4-34 252-282 (435)
234 2hes_X YDR267CP; beta-propelle 94.8 0.36 1.2E-05 38.3 11.0 63 4-98 109-172 (330)
235 3dw8_B Serine/threonine-protei 94.8 0.11 3.6E-06 41.8 7.9 27 7-34 347-373 (447)
236 3f3f_A Nucleoporin SEH1; struc 94.8 0.41 1.4E-05 35.8 10.6 32 3-35 58-91 (351)
237 3frx_A Guanine nucleotide-bind 94.8 0.21 7.3E-06 39.5 9.5 66 3-98 18-84 (319)
238 3dm0_A Maltose-binding peripla 94.8 0.22 7.5E-06 43.9 10.4 66 3-98 383-449 (694)
239 3gre_A Serine/threonine-protei 94.7 0.25 8.4E-06 40.0 9.8 63 3-98 64-130 (437)
240 3dm0_A Maltose-binding peripla 94.6 0.16 5.5E-06 44.7 9.2 60 3-98 562-621 (694)
241 1vyh_C Platelet-activating fac 94.5 0.4 1.4E-05 39.5 10.8 60 4-98 194-253 (410)
242 2gop_A Trilobed protease; beta 94.5 0.073 2.5E-06 41.6 6.0 18 5-22 106-123 (347)
243 2xe4_A Oligopeptidase B; hydro 94.5 0.16 5.4E-06 46.5 9.0 30 5-34 176-210 (751)
244 4gq1_A NUP37; propeller, trans 94.3 0.17 5.7E-06 41.6 8.1 56 9-98 323-378 (393)
245 3gre_A Serine/threonine-protei 94.3 0.21 7.1E-06 40.4 8.5 42 3-48 215-256 (437)
246 2pm7_B Protein transport prote 94.3 0.54 1.8E-05 36.6 10.6 66 4-98 206-273 (297)
247 3jrp_A Fusion protein of prote 94.2 1.1 3.7E-05 34.5 12.1 32 3-35 148-192 (379)
248 3vu4_A KMHSV2; beta-propeller 94.2 0.22 7.6E-06 40.2 8.5 32 3-35 241-272 (355)
249 2oaj_A Protein SNI1; WD40 repe 93.9 0.44 1.5E-05 44.6 10.9 83 3-131 576-667 (902)
250 4gga_A P55CDC, cell division c 93.8 0.65 2.2E-05 37.9 10.6 30 4-34 149-178 (420)
251 4gq1_A NUP37; propeller, trans 93.8 0.25 8.4E-06 40.5 8.1 30 4-34 138-175 (393)
252 1vyh_C Platelet-activating fac 93.8 0.29 1E-05 40.3 8.6 61 3-98 151-211 (410)
253 2xdw_A Prolyl endopeptidase; a 93.7 0.35 1.2E-05 43.0 9.5 32 3-34 233-268 (710)
254 2wg3_C Hedgehog-interacting pr 93.6 0.29 1E-05 43.3 8.9 41 82-126 141-186 (463)
255 2j04_A TAU60, YPL007P, hypothe 93.4 0.45 1.5E-05 44.3 10.0 30 4-34 131-160 (588)
256 2pm7_B Protein transport prote 93.3 1.1 3.7E-05 34.9 10.8 31 3-34 10-40 (297)
257 4a5s_A Dipeptidyl peptidase 4 93.3 0.36 1.2E-05 43.2 9.0 31 4-34 261-294 (740)
258 2bkl_A Prolyl endopeptidase; m 93.2 0.46 1.6E-05 42.2 9.4 30 5-34 123-156 (695)
259 4e54_B DNA damage-binding prot 93.1 0.89 3E-05 37.4 10.4 30 4-34 166-196 (435)
260 1yr2_A Prolyl oligopeptidase; 93.0 0.54 1.9E-05 42.2 9.7 31 4-34 269-303 (741)
261 2ovr_B FBW7, F-BOX/WD repeat p 92.7 1.2 4.1E-05 36.3 10.6 62 5-98 365-426 (445)
262 3iuj_A Prolyl endopeptidase; h 92.7 2.6 8.8E-05 37.7 13.7 30 5-34 131-164 (693)
263 4ggc_A P55CDC, cell division c 92.7 0.62 2.1E-05 35.2 8.3 37 4-44 69-105 (318)
264 1yr2_A Prolyl oligopeptidase; 92.5 1.4 4.9E-05 39.4 11.8 30 5-34 165-198 (741)
265 3v7d_B Cell division control p 92.5 0.34 1.1E-05 39.5 7.0 29 4-34 393-421 (464)
266 3v7d_B Cell division control p 92.1 2.5 8.5E-05 34.3 11.8 31 3-34 311-341 (464)
267 2p9w_A MAL S 1 allergenic prot 91.9 0.89 3E-05 39.5 9.4 76 4-125 138-214 (334)
268 3q6k_A 43.2 kDa salivary prote 91.9 1 3.5E-05 39.5 9.8 74 4-98 153-242 (381)
269 3s25_A Hypothetical 7-bladed b 91.8 0.69 2.4E-05 38.3 8.2 26 9-34 151-176 (302)
270 3iuj_A Prolyl endopeptidase; h 91.7 0.9 3.1E-05 40.7 9.4 32 4-35 235-269 (693)
271 2oaj_A Protein SNI1; WD40 repe 91.3 1.1 3.7E-05 42.0 9.9 58 4-98 60-117 (902)
272 3no2_A Uncharacterized protein 91.3 2.3 8E-05 33.8 10.6 15 7-21 81-95 (276)
273 2w18_A PALB2, fancn, partner a 91.2 1.6 5.4E-05 38.2 10.2 51 17-98 195-245 (356)
274 3no2_A Uncharacterized protein 91.1 1.5 5E-05 34.9 9.2 35 7-46 129-163 (276)
275 4gga_A P55CDC, cell division c 90.7 2.8 9.7E-05 34.1 10.7 61 3-98 277-339 (420)
276 3jro_A Fusion protein of prote 90.1 0.61 2.1E-05 42.1 6.8 66 3-98 205-273 (753)
277 3s25_A Hypothetical 7-bladed b 89.4 0.38 1.3E-05 39.9 4.5 25 8-32 189-214 (302)
278 3bg1_A Protein SEC13 homolog; 89.4 2.8 9.7E-05 32.8 9.5 31 3-34 14-44 (316)
279 2p9w_A MAL S 1 allergenic prot 89.4 0.92 3.2E-05 39.4 7.1 29 5-34 187-215 (334)
280 2j04_B YDR362CP, TAU91; beta p 89.2 1.4 4.8E-05 38.9 8.2 31 4-34 310-342 (524)
281 3bg1_A Protein SEC13 homolog; 89.1 2 6.9E-05 33.7 8.4 64 4-98 214-281 (316)
282 2wg3_C Hedgehog-interacting pr 88.4 2.5 8.5E-05 37.3 9.4 70 5-99 16-91 (463)
283 3sbq_A Nitrous-oxide reductase 88.2 5.2 0.00018 37.9 11.8 102 6-147 381-495 (638)
284 3jro_A Fusion protein of prote 86.7 7.9 0.00027 34.8 11.7 63 3-98 54-120 (753)
285 2bkl_A Prolyl endopeptidase; m 86.3 3.1 0.0001 36.9 8.7 28 4-31 228-258 (695)
286 1xip_A Nucleoporin NUP159; bet 85.9 3.8 0.00013 35.5 8.9 82 1-98 87-179 (388)
287 2ovr_B FBW7, F-BOX/WD repeat p 84.5 10 0.00035 30.7 10.4 28 4-34 241-268 (445)
288 2j04_B YDR362CP, TAU91; beta p 84.0 2.2 7.6E-05 37.6 6.7 29 5-34 358-386 (524)
289 2ad6_A Methanol dehydrogenase 83.6 4.5 0.00016 36.0 8.6 16 7-22 390-405 (571)
290 1p22_A F-BOX/WD-repeat protein 83.0 13 0.00044 30.2 10.5 25 9-34 138-162 (435)
291 1kb0_A Quinohemoprotein alcoho 81.2 6.7 0.00023 35.6 8.9 15 7-21 397-411 (677)
292 4a9v_A PHOX; hydrolase, beta-p 79.4 10 0.00036 35.4 9.6 18 82-99 533-550 (592)
293 1p22_A F-BOX/WD-repeat protein 78.8 21 0.00072 28.9 10.3 13 86-98 261-273 (435)
294 2xe4_A Oligopeptidase B; hydro 77.2 4.8 0.00016 36.7 6.6 33 3-35 271-305 (751)
295 3ei3_A DNA damage-binding prot 75.3 19 0.00066 35.4 10.7 104 2-159 553-664 (1158)
296 3hxj_A Pyrrolo-quinoline quino 72.9 11 0.00036 28.8 6.6 25 5-31 139-163 (330)
297 3zwu_A Alkaline phosphatase PH 72.6 8.7 0.0003 35.5 7.1 17 82-98 533-549 (592)
298 1kb0_A Quinohemoprotein alcoho 71.9 21 0.00072 32.3 9.4 84 6-132 246-350 (677)
299 3q7m_A Lipoprotein YFGL, BAMB; 70.8 15 0.00051 29.1 7.3 20 13-33 238-257 (376)
300 3q7m_A Lipoprotein YFGL, BAMB; 70.3 29 0.00099 27.5 8.9 31 13-47 52-82 (376)
301 2ad6_A Methanol dehydrogenase 66.2 52 0.0018 29.1 10.6 46 84-131 239-284 (571)
302 1yiq_A Quinohemoprotein alcoho 64.4 26 0.0009 31.7 8.5 14 8-21 394-407 (689)
303 3q6k_A 43.2 kDa salivary prote 63.4 39 0.0013 29.4 9.1 63 8-99 280-343 (381)
304 3al9_A Plexin-A2; beta-propell 62.3 38 0.0013 30.6 9.1 83 5-104 20-106 (539)
305 2w18_A PALB2, fancn, partner a 60.1 33 0.0011 29.8 8.0 15 84-98 331-345 (356)
306 1xip_A Nucleoporin NUP159; bet 57.5 24 0.00082 30.4 6.6 28 5-34 40-67 (388)
307 1kv9_A Type II quinohemoprotei 54.6 57 0.002 29.3 8.8 14 8-21 386-399 (668)
308 4fww_A Macrophage-stimulating 53.0 50 0.0017 29.2 8.1 80 6-103 18-100 (527)
309 3hx6_A Type 4 fimbrial biogene 52.9 1.1E+02 0.0038 28.4 10.6 41 3-45 140-184 (570)
310 2hz6_A Endoplasmic reticulum t 50.6 8.3 0.00028 31.7 2.4 7 92-98 174-180 (369)
311 3zwu_A Alkaline phosphatase PH 47.7 1.2E+02 0.004 28.0 9.9 17 6-22 387-403 (592)
312 1ywy_A Hypothetical protein PA 46.8 8.3 0.00029 27.1 1.6 17 82-98 36-52 (74)
313 3f7f_A Nucleoporin NUP120; nuc 46.1 1.8E+02 0.0061 27.8 11.1 32 11-46 228-259 (729)
314 1w6s_A Methanol dehydrogenase 44.6 1.5E+02 0.0052 26.7 10.0 47 84-132 245-291 (599)
315 1kv9_A Type II quinohemoprotei 42.7 1.1E+02 0.0037 27.5 8.7 16 7-22 234-249 (668)
316 2hz6_A Endoplasmic reticulum t 39.1 53 0.0018 26.8 5.6 30 13-46 8-37 (369)
317 1yiq_A Quinohemoprotein alcoho 38.5 1E+02 0.0034 27.9 7.8 36 9-48 481-516 (689)
318 1flg_A Protein (quinoprotein e 37.9 98 0.0034 27.5 7.6 14 8-21 417-430 (582)
319 1fgl_B HIV-1 GAG protein; cycl 36.1 13 0.00045 21.2 1.0 18 145-165 7-24 (26)
320 4a9v_A PHOX; hydrolase, beta-p 35.7 23 0.00079 33.1 3.2 22 5-26 533-554 (592)
321 3ks7_A Putative putative pngas 31.4 53 0.0018 29.4 4.6 37 13-50 155-191 (397)
322 1ym0_B Fibrinotic enzyme compo 31.2 14 0.00048 21.1 0.6 10 154-163 4-13 (27)
323 2vrq_A Alpha-L-arabinofuranosi 25.9 20 0.0007 31.8 1.0 15 151-166 65-79 (496)
324 2vlg_A Sporulation kinase A; h 25.4 29 0.001 23.7 1.6 15 8-22 13-27 (111)
325 1w6s_A Methanol dehydrogenase 22.4 3.1E+02 0.01 24.7 8.1 23 80-104 518-540 (599)
326 1flg_A Protein (quinoprotein e 22.0 4.1E+02 0.014 23.4 9.7 11 114-124 569-579 (582)
No 1
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.4e-55 Score=395.86 Aligned_cols=141 Identities=51% Similarity=0.979 Sum_probs=133.5
Q ss_pred CCceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 2 PGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 2 p~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
++++++|+||+||||||||||+||+|+||||+|+++++++++|++||.+ ++++.+ +|+++.|+
T Consensus 320 ~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~---------------~~~~~~--~G~~~~gg 382 (462)
T 2ece_A 320 PPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIF---------------HRADHP--AGHKLTGA 382 (462)
T ss_dssp CCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTT---------------TCBCCT--TSCCCCSC
T ss_pred CCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCee---------------cccccc--ccccCCCC
Confidence 3789999999999999999999999999999999999999999999965 455544 99999999
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceeeeecCCCCc
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDC 161 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he~r~pggdc 161 (167)
||||+||||||||||||||||+||+||||+ +++.+|+++|||+++| |+++++|+|||++ +||||||||||||
T Consensus 383 Pr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~--~~~~~~~~~~vd~~~G-L~~~~~f~vdf~~-----~~~h~~r~~ggd~ 454 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTNSLYSTWDNQFYPE--GLKGWMVKLNANPSGG-LEIDKEFFVDFGE-----ARSHQVRLSGGDA 454 (462)
T ss_dssp CCCEEECTTSSEEEEECCCCHHHHHHHSTT--CCCCEEEEEEECTTSC-EEEEEEEEEECTT-----SEEEEEEETTCCT
T ss_pred CCEEEEcCCCCEEEEEcCCcccccccccCC--CCceEEEEEEecCCCC-ceeCCCEEeeccc-----CcceeeecCCCCc
Confidence 999999999999999999999999999999 7899999999999999 9999999999988 7999999999999
Q ss_pred CccccC
Q 031020 162 TSDIWI 167 (167)
Q Consensus 162 tsd~~~ 167 (167)
|||||+
T Consensus 455 ~sd~~~ 460 (462)
T 2ece_A 455 SSDSYC 460 (462)
T ss_dssp TTCCCS
T ss_pred Cccccc
Confidence 999996
No 2
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.44 E-value=7.4e-13 Score=105.63 Aligned_cols=83 Identities=19% Similarity=0.192 Sum_probs=70.2
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+.+|++|||||+|||++...+.|.+|++......+.+..+..+|. . |+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---------------------------~----~~ 289 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD---------------------------F----PR 289 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS---------------------------C----CC
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC---------------------------C----cC
Confidence 3678999999999999999999999999975445677777777552 2 99
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
.+++||||++|||+|+ ++..+..+++|+++|.++
T Consensus 290 ~~~~spdg~~l~v~~~---------------~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 290 DFDLDPTEAFVVVVNQ---------------NTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEECTTSSEEEEEET---------------TTTEEEEEEECTTTCCEE
T ss_pred eEEECCCCCEEEEEEc---------------CCCcEEEEEEeCCCCeEE
Confidence 9999999999999993 456777889999999986
No 3
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.37 E-value=7.6e-12 Score=100.59 Aligned_cols=82 Identities=20% Similarity=0.296 Sum_probs=68.2
Q ss_pred eeEEEEecCCCEEEEEeCC-CCcEEEEecc-CCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 5 ITDFLISLDDRFLYFSNWL-HGDIRQYNIE-DPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~-hg~I~qyDIs-dp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+++|.+|||||+||++++. ++.|.+|+++ .....+.+..+..|. . |
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~----------------------------~----~ 308 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGI----------------------------H----P 308 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSS----------------------------C----C
T ss_pred cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCC----------------------------C----C
Confidence 4699999999999999999 9999999997 234556677777632 2 9
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeee
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAI 133 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l 133 (167)
+.+++||||++|||+|+ +++.+..+++|+++|.++.
T Consensus 309 ~~~~~spdg~~l~~~~~---------------~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 309 RNFIITPNGKYLLVACR---------------DTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp CEEEECTTSCEEEEEET---------------TTTEEEEEEECTTTCCEEE
T ss_pred ceEEECCCCCEEEEEEC---------------CCCCEEEEEEECCCCcEee
Confidence 99999999999999993 4667777888989999854
No 4
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.19 E-value=3.5e-10 Score=87.73 Aligned_cols=87 Identities=18% Similarity=0.252 Sum_probs=69.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC-CCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED-PKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd-p~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+++|.+|+|+++||+++...+.|.+||+.. ....+.+..+..++ . |
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~----------------------------~----~ 279 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET----------------------------Q----P 279 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS----------------------------S----C
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC----------------------------c----c
Confidence 3568999999999999999999999999974 23456666666554 2 8
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCce
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNF 137 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F 137 (167)
..+++|+||++||++++ ..+.+..+++|+++|.++.-..+
T Consensus 280 ~~~~~s~dg~~l~~~~~---------------~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQ---------------KSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp CCEEECTTSSEEEEECT---------------TTCEEEEEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCCEEEEecC---------------CCCeEEEEEEcCCCceeeEcccc
Confidence 99999999999999993 45677778999899988654444
No 5
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=2.7e-10 Score=96.81 Aligned_cols=66 Identities=6% Similarity=-0.116 Sum_probs=51.9
Q ss_pred EEEEecCCCEEEEEeC---------CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc
Q 031020 7 DFLISLDDRFLYFSNW---------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 77 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw---------~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~ 77 (167)
.|.+|||+|+|||+|. ..+.|.+||+ .+.+++++++++|.- ....|.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~---~t~~~~~~i~~~~~~--------------------~~~~g~- 125 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP---VTFLPIADIELPDAP--------------------RFDVGP- 125 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC---CCCcEEEEEECCCcc--------------------ccccCC-
Confidence 8999999999999995 2577999995 458899999998410 000122
Q ss_pred CCCCCceEEEccCCCEEEEEeC
Q 031020 78 LRGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 78 ~~g~P~~~~LS~DGkrLyVaNs 99 (167)
.|+++++|||||+|||+|.
T Consensus 126 ---~p~~~~~spDG~~l~v~n~ 144 (373)
T 2mad_H 126 ---YSWMNANTPNNADLLFFQF 144 (373)
T ss_pred ---CccceEECCCCCEEEEEec
Confidence 3999999999999999993
No 6
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.12 E-value=7.1e-10 Score=90.72 Aligned_cols=85 Identities=13% Similarity=0.213 Sum_probs=62.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..+.+|||||+||+++++.+.|++||+......+.++.+.+.. .| .+|+
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-------------------------~g----~~p~ 196 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD-------------------------PG----DHPR 196 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS-------------------------TT----CCEE
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC-------------------------CC----CCCC
Confidence 467899999999999999999999999997312233334443100 01 1399
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
.+++||||++|||+|+ .++.+..+++|.++|.++
T Consensus 197 ~~~~spdg~~l~v~~~---------------~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 197 WVAMHPTGNYLYALME---------------AGNRICEYVIDPATHMPV 230 (365)
T ss_dssp EEEECTTSSEEEEEET---------------TTTEEEEEEECTTTCCEE
T ss_pred EeEECCCCCEEEEEEC---------------CCCeEEEEEEeCCCCcEE
Confidence 9999999999999993 455677778877778764
No 7
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.10 E-value=1.1e-09 Score=87.95 Aligned_cols=89 Identities=20% Similarity=0.259 Sum_probs=65.9
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..+.+|||+|+||+++...+.|.+||+.+ ...+...++..... -..+|+.
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~----------------------------~~~~~~~ 263 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTV----------------------------NAQGSGD 263 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSS----------------------------CCCCEEE
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCC----------------------------CCCCccc
Confidence 567999999999999999999999999873 33333444432210 0123889
Q ss_pred EEEccCCCEEEEEeCCCcccccccccccccc-CcEEEEEEeeCCCCCeeecCce
Q 031020 85 IQLSLDGKRLYVTNSLFSAWDCQFYPELKEK-GSHMLQIDVNSEKGGMAINPNF 137 (167)
Q Consensus 85 ~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~-g~~~~~~dvD~~~G~l~l~~~F 137 (167)
+++||||++|||+|+ . ...+..+++|+++|.++.-..+
T Consensus 264 i~~spdg~~l~v~~~---------------~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 264 IHLSPDGKYLYASNR---------------LKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp EEECTTSSEEEEEEC---------------SSSCEEEEEEECTTTCCEEEEEEE
T ss_pred EEECCCCCEEEEECC---------------CCCCEEEEEEEcCCCCcEEEeeEe
Confidence 999999999999993 3 4677778998888887654443
No 8
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.04 E-value=6.4e-10 Score=92.68 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=50.9
Q ss_pred EEEEecCCCEEEEEeC-------C--CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc
Q 031020 7 DFLISLDDRFLYFSNW-------L--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 77 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw-------~--hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~ 77 (167)
.|++|||+|+|||+|. + .+.|.+||+ .+.++++++.+++.- .-.|.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~---~t~~~~~~i~~~~~~---------------------~~~g~- 108 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA---DKLTFEKEISLPPKR---------------------VQGLN- 108 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET---TTCCEEEEEEECTTB---------------------CCBCC-
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC---cCCcEEEEEEcCccc---------------------cccCC-
Confidence 8999999999999995 2 456999985 457889999886410 00122
Q ss_pred CCCCCceEEEccCCCEEEEEeC
Q 031020 78 LRGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 78 ~~g~P~~~~LS~DGkrLyVaNs 99 (167)
.|..+++|||||+|||+|.
T Consensus 109 ---~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 109 ---YDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp ---CGGGEEECTTSSEEEEEEE
T ss_pred ---CcceEEECCCCCEEEEECC
Confidence 3999999999999999993
No 9
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.02 E-value=7.2e-10 Score=97.50 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=51.5
Q ss_pred EEEEecCCCEEEEEeCC---------CCcEEEEeccCCCCCeEEEEEEeCc--eeecCCceeEeeCCCCCCCCCCccccC
Q 031020 7 DFLISLDDRFLYFSNWL---------HGDIRQYNIEDPKNPVLTGQIWVGG--LFRKGSPVVAVTDDGQPYQSDVPEVQG 75 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw~---------hg~I~qyDIsdp~~pklvg~v~~GG--~~~~~~~v~v~~~~~~~~~p~~~~~~g 75 (167)
.|++|||+|+|||+|+. .+.|.+|| +.+.+++++|.+++ .. --|
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD---~~t~~v~~~I~v~~g~r~----------------------~~g 136 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD---PVTLLPTADIELPDAPRF----------------------LVG 136 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC---TTTCCEEEEEEETTCCCC----------------------CBS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEE---CCCCeEEEEEECCCcccc----------------------ccC
Confidence 49999999999999962 46799888 55688999999875 10 002
Q ss_pred ccCCCCCceEEEccCCCEEEEEeC
Q 031020 76 HRLRGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 76 ~~~~g~P~~~~LS~DGkrLyVaNs 99 (167)
.+ |+++++|+|||+|||+|.
T Consensus 137 ~~----P~~~a~spDGk~lyVan~ 156 (386)
T 3sjl_D 137 TY----PWMTSLTPDGKTLLFYQF 156 (386)
T ss_dssp CC----GGGEEECTTSSEEEEEEC
T ss_pred CC----CceEEEcCCCCEEEEEEc
Confidence 34 999999999999999994
No 10
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.02 E-value=1.7e-09 Score=88.44 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=58.1
Q ss_pred ceeEEE-EecCCCEEEEEeCCCC-----cEEEEeccCCCCCeEEE-EEEeCceeecCCceeEeeCCCCCCCCCCccccCc
Q 031020 4 LITDFL-ISLDDRFLYFSNWLHG-----DIRQYNIEDPKNPVLTG-QIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 76 (167)
Q Consensus 4 l~tdI~-IS~DdRfLYVSnw~hg-----~I~qyDIsdp~~pklvg-~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~ 76 (167)
.+++|. +|||||+||++|++++ .|++|+++.....+.+. .+...+
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~---------------------------- 306 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT---------------------------- 306 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS----------------------------
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC----------------------------
Confidence 478899 9999999999999887 89999997423322222 232222
Q ss_pred cCCCCCceEEEcc---CCCEEEEEeCCCccccccccccccccCcEEEEEEeeCC
Q 031020 77 RLRGGPQMIQLSL---DGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSE 127 (167)
Q Consensus 77 ~~~g~P~~~~LS~---DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~ 127 (167)
.+|+.+++|| ||++|||+|+ +++.+..+++|++
T Consensus 307 ---~~~~~~a~sp~~~dg~~l~v~~~---------------~~~~v~v~~~~~~ 342 (365)
T 1jof_A 307 ---SGGHSNAVSPCPWSDEWMAITDD---------------QEGWLEIYRWKDE 342 (365)
T ss_dssp ---CCTTCCCEEECTTCTTEEEEECS---------------SSCEEEEEEEETT
T ss_pred ---CCcccceecCCCcCCCEEEEEEc---------------CCCeEEEEEEchh
Confidence 1389999999 8999999993 4567777888764
No 11
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.02 E-value=4.1e-09 Score=82.63 Aligned_cols=64 Identities=22% Similarity=0.341 Sum_probs=52.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|+|+++||++++..+.|.+||+.+....+.+.++..++ .|.
T Consensus 177 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~--------------------------------~~~ 224 (331)
T 3u4y_A 177 RPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNN--------------------------------LPG 224 (331)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSS--------------------------------CCC
T ss_pred CccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCC--------------------------------CCc
Confidence 357899999999999999999999999987533223366666543 299
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++||||++|||+++
T Consensus 225 ~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 225 TIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CEEECTTSSEEEEECS
T ss_pred eEEECCCCCEEEEEEc
Confidence 9999999999999993
No 12
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.99 E-value=6e-10 Score=96.40 Aligned_cols=67 Identities=9% Similarity=-0.061 Sum_probs=53.5
Q ss_pred EEEEecCCCEEEEEeC---------CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc
Q 031020 7 DFLISLDDRFLYFSNW---------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 77 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw---------~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~ 77 (167)
.|.+|||+|+|||+|. ..+.|.+|| +.+.+.+++|.+||. ...+.|..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD---~~T~~vv~~I~v~~~--------------------~~~~~g~~ 125 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFD---PVTFLPIADIELPDA--------------------PRFSVGPR 125 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEEC---TTTCCEEEEEEETTS--------------------CSCCBSCC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEE---CCCCCEEEEEECCCc--------------------cccccCCC
Confidence 7999999999999994 357899888 556899999999841 01112233
Q ss_pred CCCCCceEEEccCCCEEEEEeCC
Q 031020 78 LRGGPQMIQLSLDGKRLYVTNSL 100 (167)
Q Consensus 78 ~~g~P~~~~LS~DGkrLyVaNsl 100 (167)
|+++++|||||+|||+|..
T Consensus 126 ----P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 126 ----VHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp ----TTSEEECTTSSCEEEEECS
T ss_pred ----cceEEEcCCCCEEEEEccC
Confidence 9999999999999999953
No 13
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.99 E-value=7.8e-10 Score=97.93 Aligned_cols=66 Identities=15% Similarity=0.070 Sum_probs=52.5
Q ss_pred EEEEecCCCEEEEEeC---------CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc
Q 031020 7 DFLISLDDRFLYFSNW---------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 77 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw---------~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~ 77 (167)
.|.+|||+|+|||+|. ..+.|.+|| +.+.+++++|.++|.- ....|.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD---~~t~~vv~~I~v~g~~--------------------r~~~g~- 177 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD---PVTFLPIADIELPDAP--------------------RFLVGT- 177 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC---TTTCCEEEEEEETTCC--------------------CCCBSC-
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEE---CCCCcEEEEEECCCcc--------------------ccccCC-
Confidence 8999999999999996 367899888 5568899999998410 001122
Q ss_pred CCCCCceEEEccCCCEEEEEeC
Q 031020 78 LRGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 78 ~~g~P~~~~LS~DGkrLyVaNs 99 (167)
.|++|++|+|||+|||+|.
T Consensus 178 ---~P~~~~~spDGk~lyV~n~ 196 (426)
T 3c75_H 178 ---YQWMNALTPDNKNLLFYQF 196 (426)
T ss_dssp ---CGGGSEECTTSSEEEEEEC
T ss_pred ---CcceEEEcCCCCEEEEEec
Confidence 3999999999999999994
No 14
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.97 E-value=1.5e-08 Score=80.58 Aligned_cols=82 Identities=18% Similarity=0.309 Sum_probs=60.7
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..+.+|||++ ||+++...+.|++|++......+....+.... | .+|+.
T Consensus 143 ~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~--------------------------g----~~p~~ 191 (347)
T 3hfq_A 143 IHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA--------------------------G----FGPRH 191 (347)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCT--------------------------T----CCEEE
T ss_pred ceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC--------------------------C----CCCce
Confidence 66799999999 99999999999999998433333333222110 1 13999
Q ss_pred EEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 85 IQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 85 ~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
+++||||++|||+++ .+..+..++++..+|.++
T Consensus 192 ~~~spdg~~l~v~~~---------------~~~~v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGE---------------LSSQIASLKYDTQTGAFT 224 (347)
T ss_dssp EEECTTSSEEEEEET---------------TTTEEEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEeC---------------CCCEEEEEEecCCCCceE
Confidence 999999999999994 455677788887777664
No 15
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.83 E-value=4.4e-08 Score=76.65 Aligned_cols=75 Identities=7% Similarity=0.133 Sum_probs=60.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|.+|+|+++||+++...+.|.+||+.. .+++..+.++. |.
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~~~---------------------------------~~ 275 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTRN---GNILAKVAAPE---------------------------------SL 275 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETTT---CCEEEEEECSS---------------------------------CC
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECCC---CcEEEEEEcCC---------------------------------Cc
Confidence 4678999999999999999999999999754 66777777654 77
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l 131 (167)
.+.+|+||++|||+++ .+..+..+|. .+|.+
T Consensus 276 ~~~~s~dg~~l~v~~~---------------~~~~v~~~d~--~~~~~ 306 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHR---------------QAGKVSVIDA--KSYKV 306 (353)
T ss_dssp CEEEETTTTEEEEEET---------------TTTEEEEEET--TTTEE
T ss_pred eEEECCCCCEEEEEEC---------------CCCeEEEEEC--CCCeE
Confidence 8999999999999993 3556766766 55654
No 16
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.80 E-value=4.7e-08 Score=76.49 Aligned_cols=78 Identities=18% Similarity=0.215 Sum_probs=59.6
Q ss_pred eEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceE
Q 031020 6 TDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMI 85 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~ 85 (167)
..+.+|+|+++||++++..+.|.+||+.. .++...+..++ . |..+
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~----------------------------~----~~~~ 319 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDAKS---YKVVKTFDTPT----------------------------H----PNSL 319 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEEEECCS----------------------------E----EEEE
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEECCC---CeEEEEEecCC----------------------------C----CCeE
Confidence 46899999999999999999999999654 67888887655 2 9999
Q ss_pred EEccCCCEEEEEeCCCccccccccccccccCcEEEEEE
Q 031020 86 QLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQID 123 (167)
Q Consensus 86 ~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~d 123 (167)
++|+||++|||+|.--...+..- .....+++++
T Consensus 320 ~~s~dg~~l~v~~~~~~~~~~~~-----~~~~~v~~i~ 352 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQKSTKQQEA-----TQPDDVIRIA 352 (353)
T ss_dssp EECTTSCEEEEEEECCCBTTBCC-----SSCEEEEEEE
T ss_pred EEcCCCCEEEEEEcccccccccc-----cCCCcEEEEe
Confidence 99999999999996322222111 3456666665
No 17
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.79 E-value=3.5e-08 Score=89.35 Aligned_cols=62 Identities=18% Similarity=0.269 Sum_probs=52.9
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..+.+|+|+|+|||+|+ .+.|.+||+. ..+.+++.+|.+|. . |+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~-dg~V~viD~~-~~t~~~v~~i~~G~----------------------------~----P~ 243 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGR-DGKVNMIDLW-MKEPTTVAEIKIGS----------------------------E----AR 243 (567)
T ss_dssp CEEEEEECTTSCEEEEEET-TSEEEEEETT-SSSCCEEEEEECCS----------------------------E----EE
T ss_pred CccceEECCCCCEEEEEcC-CCeEEEEECC-CCCCcEeEEEecCC----------------------------C----Cc
Confidence 4567999999999999996 6799999975 23578889999876 2 99
Q ss_pred eEEEc----cCCCEEEEEeC
Q 031020 84 MIQLS----LDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS----~DGkrLyVaNs 99 (167)
.+++| ||||+|||+|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~ 263 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAY 263 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEE
T ss_pred eeEEccccCCCCCEEEEEEc
Confidence 99999 69999999994
No 18
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.73 E-value=7.4e-08 Score=85.42 Aligned_cols=61 Identities=15% Similarity=0.154 Sum_probs=52.3
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..+++|||+|+||++++. +.|.+||+. ..+.+.+.++..|. . |+.
T Consensus 181 ~~~v~~spdg~~l~v~~~d-~~V~v~D~~-~~t~~~~~~i~~g~----------------------------~----p~~ 226 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD-ARIDMIDLW-AKEPTKVAEIKIGI----------------------------E----ARS 226 (543)
T ss_dssp EEEEEECTTSCEEEEEETT-SEEEEEETT-SSSCEEEEEEECCS----------------------------E----EEE
T ss_pred cceEEECCCCCEEEEECCC-CeEEEEECc-CCCCcEEEEEecCC----------------------------C----cce
Confidence 4568899999999999998 999999984 24578888888654 2 999
Q ss_pred EEEcc----CCCEEEEEeC
Q 031020 85 IQLSL----DGKRLYVTNS 99 (167)
Q Consensus 85 ~~LS~----DGkrLyVaNs 99 (167)
+++|| ||++|||+|.
T Consensus 227 va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEECCSTTCTTTEEEEEEE
T ss_pred EEeCCCcCCCCCEEEEEEc
Confidence 99999 9999999994
No 19
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.72 E-value=9.5e-08 Score=73.99 Aligned_cols=84 Identities=18% Similarity=0.253 Sum_probs=60.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEE--EEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTG--QIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg--~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.+..+.+|+|+++||+++...+.|.+||+......+... .+.... | ..
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~--------------------------~----~~ 179 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE--------------------------G----AG 179 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST--------------------------T----CC
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC--------------------------C----CC
Confidence 467789999999999999889999999997533333222 222110 1 23
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
|+.+++||||++||++++ ....+..+|++..+|.++
T Consensus 180 ~~~~~~~pdg~~l~~~~~---------------~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 180 PRHMVFHPNEQYAYCVNE---------------LNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp EEEEEECTTSSEEEEEET---------------TTTEEEEEESSCTTSCCE
T ss_pred cceEEECCCCCEEEEEeC---------------CCCEEEEEEecCCCCcEE
Confidence 999999999999999983 345666677776666553
No 20
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.70 E-value=9.9e-08 Score=79.43 Aligned_cols=74 Identities=5% Similarity=-0.005 Sum_probs=58.1
Q ss_pred EEEecCCCEEEEEeCC----------CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc
Q 031020 8 FLISLDDRFLYFSNWL----------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 77 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~----------hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~ 77 (167)
+++|+|+++|||+|-. .+.|++||+. +.+.+.++++|+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~---t~~~v~~i~~~~----------------------------- 306 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTK---TKQRVARIPGRD----------------------------- 306 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETT---TTEEEEEEECTT-----------------------------
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECC---CCcEEEEEecCC-----------------------------
Confidence 7899999999999751 3579999954 478888888765
Q ss_pred CCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCc
Q 031020 78 LRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPN 136 (167)
Q Consensus 78 ~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~ 136 (167)
|..+++||||++||++| . +.+..+|. ++|.|++-..
T Consensus 307 ----p~~ia~spdg~~l~v~n---------------~--~~v~v~D~--~t~~l~~~~~ 342 (361)
T 2oiz_A 307 ----ALSMTIDQQRNLMLTLD---------------G--GNVNVYDI--SQPEPKLLRT 342 (361)
T ss_dssp ----CCEEEEETTTTEEEEEC---------------S--SCEEEEEC--SSSSCEEEEE
T ss_pred ----eeEEEECCCCCEEEEeC---------------C--CeEEEEEC--CCCcceeeEE
Confidence 99999999999999999 3 45666655 8886654433
No 21
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.66 E-value=2.3e-07 Score=72.66 Aligned_cols=65 Identities=22% Similarity=0.269 Sum_probs=48.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCc-EEEEeccCCCCCeEE-EEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGD-IRQYNIEDPKNPVLT-GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~-I~qyDIsdp~~pklv-g~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
-+..+.+|||+++||+++...+. |.+|++......... .++... |. +
T Consensus 129 ~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~---------------------------~~----~ 177 (331)
T 3u4y_A 129 DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG---------------------------GT----R 177 (331)
T ss_dssp TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS---------------------------SS----S
T ss_pred CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC---------------------------CC----C
Confidence 45789999999999999999888 999999853221111 111111 12 3
Q ss_pred CceEEEccCCCEEEEEeC
Q 031020 82 PQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNs 99 (167)
|+.+++||||++|||+++
T Consensus 178 ~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANL 195 (331)
T ss_dssp EEEEEECTTSSEEEEEET
T ss_pred ccceEECCCCCEEEEEeC
Confidence 999999999999999994
No 22
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.62 E-value=1.2e-07 Score=83.82 Aligned_cols=72 Identities=15% Similarity=0.093 Sum_probs=60.0
Q ss_pred EEEecCCCEEEEEeCC---------CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccC
Q 031020 8 FLISLDDRFLYFSNWL---------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 78 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~---------hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~ 78 (167)
|.+|+|+++|||+|.. .++|.++|. ++.+.+.+|++|+ .
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~---~T~kvv~~I~vg~----------------------------~- 371 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA---ETGERINKIELGH----------------------------E- 371 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET---TTCCEEEEEEEEE----------------------------E-
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEEC---CCCeEEEEEECCC----------------------------C-
Confidence 7899999999999852 357999994 5588999999987 3
Q ss_pred CCCCceEEEccCCC-EEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe
Q 031020 79 RGGPQMIQLSLDGK-RLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 79 ~g~P~~~~LS~DGk-rLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l 131 (167)
|..+.+|+||+ +|||+|. .++.+..||. .+++.
T Consensus 372 ---P~gia~spDg~~~lyv~n~---------------~s~~VsVID~--~t~kv 405 (426)
T 3c75_H 372 ---IDSINVSQDAEPLLYALSA---------------GTQTLHIYDA--ATGEE 405 (426)
T ss_dssp ---ECEEEECCSSSCEEEEEET---------------TTTEEEEEET--TTCCE
T ss_pred ---cCeEEEccCCCEEEEEEcC---------------CCCeEEEEEC--CCCCE
Confidence 99999999999 9999992 4667777887 67765
No 23
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.61 E-value=2.2e-07 Score=84.17 Aligned_cols=103 Identities=8% Similarity=0.020 Sum_probs=67.3
Q ss_pred ceeEEEEe----cCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCcee------ecC--------------------
Q 031020 4 LITDFLIS----LDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLF------RKG-------------------- 53 (167)
Q Consensus 4 l~tdI~IS----~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~------~~~-------------------- 53 (167)
-+..|.+| ||||+|||+|...+.|.+|| .++.+++.+|+++|.- +..
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD---~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMD---GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEE---TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEE---CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 35678999 79999999999999999998 4558888999988731 111
Q ss_pred --CceeEeeCCCCCCCCCC-ccccCccCCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCC
Q 031020 54 --SPVVAVTDDGQPYQSDV-PEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGG 130 (167)
Q Consensus 54 --~~v~v~~~~~~~~~p~~-~~~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~ 130 (167)
+.|.+..-.+.. .+.. ..-.|+. |+.+.+|+|||+|||||. .++.|..+|. .+|+
T Consensus 318 ~~g~v~~vd~~~~~-~~~v~~i~~~~~----~~d~~~~pdgr~~~va~~---------------~sn~V~ViD~--~t~k 375 (567)
T 1qks_A 318 ETGKILLVDYTDLN-NLKTTEISAERF----LHDGGLDGSHRYFITAAN---------------ARNKLVVIDT--KEGK 375 (567)
T ss_dssp TTTEEEEEETTCSS-EEEEEEEECCSS----EEEEEECTTSCEEEEEEG---------------GGTEEEEEET--TTTE
T ss_pred CCCeEEEEecCCCc-cceeeeeecccc----ccCceECCCCCEEEEEeC---------------CCCeEEEEEC--CCCc
Confidence 111111111100 0000 1112444 889999999999999993 3556666555 7776
Q ss_pred e
Q 031020 131 M 131 (167)
Q Consensus 131 l 131 (167)
+
T Consensus 376 l 376 (567)
T 1qks_A 376 L 376 (567)
T ss_dssp E
T ss_pred E
Confidence 5
No 24
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.60 E-value=1e-07 Score=83.82 Aligned_cols=56 Identities=16% Similarity=0.041 Sum_probs=48.9
Q ss_pred EEEecCCCEEEEEeCC----CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 8 FLISLDDRFLYFSNWL----HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~----hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+-.||++.|||+|+. .+.|.++| +.+.+++++|++|. . |.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD---~~t~~v~~~I~vG~----------------------------~----P~ 82 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVID---GEAGRVIGMIDGGF----------------------------L----PN 82 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEE---TTTTEEEEEEEECS----------------------------S----CE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEE---CCCCeEEEEEECCC----------------------------C----Cc
Confidence 4568999999999997 67899888 55689999999976 2 97
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
+.+|||||+|||+|+
T Consensus 83 -va~spDG~~lyVan~ 97 (386)
T 3sjl_D 83 -PVVADDGSFIAHAST 97 (386)
T ss_dssp -EEECTTSSCEEEEEE
T ss_pred -EEECCCCCEEEEEcc
Confidence 999999999999995
No 25
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.60 E-value=2.5e-07 Score=84.03 Aligned_cols=41 Identities=22% Similarity=0.370 Sum_probs=35.5
Q ss_pred ceeEEEEecCCCEEEEEeCC------------------CCcEEEEeccCCCCCeEEEEEEeC
Q 031020 4 LITDFLISLDDRFLYFSNWL------------------HGDIRQYNIEDPKNPVLTGQIWVG 47 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~------------------hg~I~qyDIsdp~~pklvg~v~~G 47 (167)
+.=|+.+|||++.+|+|+|+ .+.|.+||++. .+++.++.+|
T Consensus 189 ~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~---~k~~~tI~vg 247 (462)
T 2ece_A 189 LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK---RKRIHSLTLG 247 (462)
T ss_dssp CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT---TEEEEEEESC
T ss_pred ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC---CcEeeEEecC
Confidence 34478899999999999997 79999999874 5888999997
No 26
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.58 E-value=4.2e-07 Score=80.61 Aligned_cols=63 Identities=10% Similarity=-0.019 Sum_probs=52.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++.|.+|+|++++|||+...|.|++||+++....+ +.++..|. . |+
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i~~~~----------------------------~----~~ 327 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSIGAAP----------------------------F----LH 327 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEEECCS----------------------------S----CC
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEeccCc----------------------------C----cc
Confidence 468899999999999999999999999998755544 33454332 3 99
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+.+||||++|||+|+
T Consensus 328 ~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 328 DGGWDSSHRYFMTAAN 343 (543)
T ss_dssp CEEECTTSCEEEEEEG
T ss_pred CceECCCCCEEEEEec
Confidence 9999999999999993
No 27
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.57 E-value=6e-07 Score=76.19 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=58.5
Q ss_pred EEEecCCCEEEEEeC---------CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccC
Q 031020 8 FLISLDDRFLYFSNW---------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 78 (167)
Q Consensus 8 I~IS~DdRfLYVSnw---------~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~ 78 (167)
+.+|+|++.|||++- ..++|+++|. ++.+.+.+|++|+ .
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~---~t~~vv~~i~~g~----------------------------~- 319 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG---LVGQTSSQISLGH----------------------------D- 319 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEEC---CCCEEEEEEECCC----------------------------C-
Confidence 789999999999874 2368999984 5588999999877 2
Q ss_pred CCCCceEEEccCCC-EEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe
Q 031020 79 RGGPQMIQLSLDGK-RLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 79 ~g~P~~~~LS~DGk-rLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l 131 (167)
|..+++|+||+ +||++|. ..+.+..+|. ++++.
T Consensus 320 ---p~~i~~s~Dg~~~l~v~~~---------------~~~~V~ViD~--~t~~v 353 (373)
T 2mad_H 320 ---VDAISVAQDGGPDLYALSA---------------GTEVLHIYDA--GAGDQ 353 (373)
T ss_pred ---cCeEEECCCCCeEEEEEcC---------------CCCeEEEEEC--CCCCE
Confidence 99999999999 8999992 3457777887 66765
No 28
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.56 E-value=8.5e-07 Score=69.00 Aligned_cols=71 Identities=14% Similarity=0.150 Sum_probs=55.4
Q ss_pred ceeEEEEec-CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~-DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+..+.+|+ |+++||++ .+.|.+||+.. .++...+..++ . |
T Consensus 256 ~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~----------------------------~----~ 297 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV---LNRLAKYDLKQ---RKLIKAANLDH----------------------------T----Y 297 (349)
T ss_dssp CEEEEEECSSCTTEEEEE---ESEEEEEETTT---TEEEEEEECSS----------------------------C----C
T ss_pred cceeeEecCCCCCEEEEE---cCeEEEEECcc---CeEEEEEcCCC----------------------------C----c
Confidence 456889999 99999999 78999999664 67777776554 2 8
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCC
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGG 130 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~ 130 (167)
..+++|+||++||+++ . ...+..+|. +++.
T Consensus 298 ~~~~~s~dg~~l~~~~---------------~-~~~v~v~d~--~~~~ 327 (349)
T 1jmx_B 298 YCVAFDKKGDKLYLGG---------------T-FNDLAVFNP--DTLE 327 (349)
T ss_dssp CEEEECSSSSCEEEES---------------B-SSEEEEEET--TTTE
T ss_pred cceEECCCCCEEEEec---------------C-CCeEEEEec--cccc
Confidence 8999999999999965 2 356666776 5554
No 29
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.53 E-value=1.7e-07 Score=81.00 Aligned_cols=85 Identities=13% Similarity=0.047 Sum_probs=64.1
Q ss_pred EEEecCCCEEEEEeC---C-----CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 8 FLISLDDRFLYFSNW---L-----HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 8 I~IS~DdRfLYVSnw---~-----hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
+.+|+|++.|||+++ + .+.+.++| .++.+.+.+|++|+ .
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD---~~t~~vv~~i~vg~----------------------------~-- 315 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVT---ASVGQTSGPISNGH----------------------------D-- 315 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEE---SSSCCEEECCEEEE----------------------------E--
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEE---CCCCeEEEEEECCC----------------------------C--
Confidence 789999999999987 3 35677888 45588999999987 2
Q ss_pred CCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCC
Q 031020 80 GGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDG 147 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~g 147 (167)
|..|.+|+||++|||||. + ..+.+..||. .+++.. . .|.-++.|.|
T Consensus 316 --p~gi~~s~Dg~~l~va~~--------~------~~~~VsVID~--~t~kvv--~--~I~vg~~P~~ 361 (368)
T 1mda_H 316 --SDAIIAAQDGASDNYANS--------A------GTEVLDIYDA--ASDQDQ--S--SVELDKGPES 361 (368)
T ss_dssp --ECEEEECCSSSCEEEEEE--------T------TTTEEEEEES--SSCEEE--E--ECCCCSCCCE
T ss_pred --cceEEECCCCCEEEEEcc--------C------CCCeEEEEEC--CCCcEE--E--EEECCCCCCE
Confidence 999999999999999992 1 3567777887 666542 2 2344566665
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.53 E-value=4e-07 Score=74.23 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=52.9
Q ss_pred CceeEEEEecCCCEEEEEeCCC----------CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCcc
Q 031020 3 GLITDFLISLDDRFLYFSNWLH----------GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 72 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~h----------g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~ 72 (167)
.-+.+|.+++||| |||++++. +.|.+|| +++.++..++.+..
T Consensus 172 ~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id---~~t~~v~~~~~~~~------------------------ 223 (328)
T 3dsm_A 172 IQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRID---AETFTVEKQFKFKL------------------------ 223 (328)
T ss_dssp SCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEE---TTTTEEEEEEECCT------------------------
T ss_pred CCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEE---CCCCeEEEEEecCC------------------------
Confidence 3457899999998 78888875 7899998 44577777776632
Q ss_pred ccCccCCCCCceEEEccCCCEEEEEeCCCccccc
Q 031020 73 VQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDC 106 (167)
Q Consensus 73 ~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD~ 106 (167)
|.. |+.+++|+||++|||+|+-...||.
T Consensus 224 --g~~----p~~la~~~d~~~lyv~~~~v~~~d~ 251 (328)
T 3dsm_A 224 --GDW----PSEVQLNGTRDTLYWINNDIWRMPV 251 (328)
T ss_dssp --TCC----CEEEEECTTSCEEEEESSSEEEEET
T ss_pred --CCC----ceeEEEecCCCEEEEEccEEEEEEC
Confidence 123 9999999999999999964444443
No 31
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.51 E-value=8.6e-07 Score=68.96 Aligned_cols=68 Identities=24% Similarity=0.238 Sum_probs=52.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|+|+++||+++...+.|.+||+.. .+...++.+++. +..+|.. |.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---~~~~~~~~~~~~---------------------~~~~~~~----~~ 95 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---CKNTFHANLSSV---------------------PGEVGRS----MY 95 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEESCCS---------------------TTEEEEC----SS
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC---CcEEEEEEcccc---------------------ccccccc----cc
Confidence 4678999999999999999999999999653 667766665430 0011223 89
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++||||++||++++
T Consensus 96 ~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 96 SFAISPDGKEVYATVN 111 (349)
T ss_dssp CEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEEcc
Confidence 9999999999999994
No 32
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=7.4e-07 Score=77.12 Aligned_cols=107 Identities=18% Similarity=0.172 Sum_probs=72.2
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+.+|++++++.+|||+.|..+.|.+|+... .++.....+++ .++|+.
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~---~~~~~~~~~~~------------------------------~~~P~g 274 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTT---QETTPLFTIQD------------------------------SGWEFH 274 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTT---TEEEEEEECSS------------------------------SSCCEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCC---CcEEEEEEcCC------------------------------CCccee
Confidence 467889998889999999999999999653 33322222222 124999
Q ss_pred EEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccC--CCCCCcceeeeecCCC
Q 031020 85 IQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEA--EPDGPALAHEMRYPGG 159 (167)
Q Consensus 85 ~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~--~p~gp~~~he~r~pgg 159 (167)
+++++||++|||+++ .+..|.+++.|..+|.+..-..|.=.++. -.+|+...-++..|.+
T Consensus 275 ia~~pdG~~lyv~d~---------------~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~ 336 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVV---------------NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQ 336 (430)
T ss_dssp EEECTTSSEEEEEET---------------TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEE
T ss_pred EEEcCCCCEEEEEEC---------------CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcc
Confidence 999999999999993 57899999999877765322222212222 1245545556667763
No 33
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.47 E-value=1.8e-06 Score=66.61 Aligned_cols=66 Identities=17% Similarity=0.074 Sum_probs=51.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|+|+++||+++...+.|.+||+.. .+++.++..++. ...+.. |.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~----------------------~~~~~~----~~ 85 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT---GETLGRIDLSTP----------------------EERVKS----LF 85 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTT---CCEEEEEECCBT----------------------TEEEEC----TT
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCC---CCeEeeEEcCCc----------------------cccccc----cc
Confidence 3678999999999999999999999999764 566666665430 001122 89
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++|+||++||+++
T Consensus 86 ~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 86 GAALSPDGKTLAIYE 100 (337)
T ss_dssp CEEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEEe
Confidence 999999999999996
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.45 E-value=7.2e-07 Score=74.76 Aligned_cols=54 Identities=22% Similarity=0.172 Sum_probs=45.5
Q ss_pred EEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEc
Q 031020 9 LISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS 88 (167)
Q Consensus 9 ~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS 88 (167)
-++++++.||+++|..+.|.+||. ++.+++++++.|. |+-..|+
T Consensus 70 Gi~~~g~~lyv~t~~~~~v~viD~---~t~~v~~~i~~g~---------------------------------~~g~glt 113 (266)
T 2iwa_A 70 GLTLLNEKLYQVVWLKNIGFIYDR---RTLSNIKNFTHQM---------------------------------KDGWGLA 113 (266)
T ss_dssp EEEEETTEEEEEETTCSEEEEEET---TTTEEEEEEECCS---------------------------------SSCCEEE
T ss_pred EEEEeCCEEEEEEecCCEEEEEEC---CCCcEEEEEECCC---------------------------------CCeEEEE
Confidence 355568899999999999999994 4688999998872 5557799
Q ss_pred cCCCEEEEEe
Q 031020 89 LDGKRLYVTN 98 (167)
Q Consensus 89 ~DGkrLyVaN 98 (167)
+||++|||||
T Consensus 114 ~Dg~~l~vs~ 123 (266)
T 2iwa_A 114 TDGKILYGSD 123 (266)
T ss_dssp ECSSSEEEEC
T ss_pred ECCCEEEEEC
Confidence 9999999999
No 35
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.43 E-value=2.8e-06 Score=65.48 Aligned_cols=72 Identities=8% Similarity=0.088 Sum_probs=55.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|.+|+|+++||++ .+.|.+||+.. .++...+..+. . |.
T Consensus 242 ~~~~~~~s~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~----------------------------~----~~ 283 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA---YNVLESFDLEK---NASIKRVPLPH----------------------------S----YY 283 (337)
T ss_dssp CEEEEEECTTSSEEEEE---ESEEEEEETTT---TEEEEEEECSS----------------------------C----CC
T ss_pred ceeeEEECCCCCEEEEe---CCeEEEEECCC---CcCcceecCCC----------------------------c----ee
Confidence 35679999999999999 48999999754 66776666543 2 89
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l 131 (167)
.+++|+||++||+++ . ...+..+|+ ++|..
T Consensus 284 ~~~~s~dg~~l~~~~---------------~-~~~i~v~d~--~~~~~ 313 (337)
T 1pby_B 284 SVNVSTDGSTVWLGG---------------A-LGDLAAYDA--ETLEK 313 (337)
T ss_dssp EEEECTTSCEEEEES---------------B-SSEEEEEET--TTCCE
T ss_pred eEEECCCCCEEEEEc---------------C-CCcEEEEEC--cCCcE
Confidence 999999999999986 2 345666766 56654
No 36
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.42 E-value=1.2e-06 Score=70.00 Aligned_cols=45 Identities=22% Similarity=0.285 Sum_probs=34.7
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEecc
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFE 142 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~ 142 (167)
|+.+++|+||++|||+++ ....|.++|+|+++|.+. +...+.++.
T Consensus 151 pngi~~spdg~~lyv~~~---------------~~~~i~~~~~d~~~G~~~-~~~~~~~~~ 195 (297)
T 3g4e_A 151 SNGLDWSLDHKIFYYIDS---------------LSYSVDAFDYDLQTGQIS-NRRSVYKLE 195 (297)
T ss_dssp EEEEEECTTSCEEEEEEG---------------GGTEEEEEEECTTTCCEE-EEEEEEECC
T ss_pred ccceEEcCCCCEEEEecC---------------CCCcEEEEeccCCCCccc-CcEEEEECC
Confidence 999999999999999994 456788899988888763 334445553
No 37
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.41 E-value=1.1e-06 Score=68.67 Aligned_cols=62 Identities=13% Similarity=0.214 Sum_probs=46.2
Q ss_pred ceeEEEEecCCCEEEEEeCC--CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWL--HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~--hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.+.+|++++++++||++++. .+.|.+++++. ...+. +...+ ...
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~---~~~~~------------------------------~~~ 168 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRI---LAQDN------------------------------LGL 168 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEE---EECTT------------------------------CSC
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEE---EEECC------------------------------CCC
Confidence 46899999999999999998 67899998753 22221 11111 013
Q ss_pred CceEEEccCCCEEEEEeC
Q 031020 82 PQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNs 99 (167)
|+.+++++||++|||+++
T Consensus 169 P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp EEEEEEETTTTEEEEEET
T ss_pred CcEEEEcCCCCEEEEEEC
Confidence 999999999999999995
No 38
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.41 E-value=2.8e-07 Score=85.81 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=50.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCC---------CCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCcccc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPK---------NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQ 74 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~---------~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~ 74 (167)
-+-.|.+||||||+||+|.+.+.|.+||+..-. +-+++.++.+|-
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~-------------------------- 331 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL-------------------------- 331 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS--------------------------
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC--------------------------
Confidence 345689999999999999999999999998410 112455555543
Q ss_pred CccCCCCCceEEEccCCCEEEEEeCC
Q 031020 75 GHRLRGGPQMIQLSLDGKRLYVTNSL 100 (167)
Q Consensus 75 g~~~~g~P~~~~LS~DGkrLyVaNsl 100 (167)
+|+.+++++|| ++|++|.|
T Consensus 332 ------gP~h~aF~~dG-~aY~t~~l 350 (595)
T 1fwx_A 332 ------GPLHTAFDGRG-NAYTSLFL 350 (595)
T ss_dssp ------CEEEEEECTTS-EEEEEETT
T ss_pred ------CcceEEECCCC-eEEEEEec
Confidence 49999999999 99999964
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.37 E-value=4.5e-06 Score=66.73 Aligned_cols=61 Identities=25% Similarity=0.339 Sum_probs=50.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|+|+++||+++...+.|++||+.. .+....+..+. .|.
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~~~--------------------------------~~~ 161 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVT---KAVINTVSVGR--------------------------------SPK 161 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEECCS--------------------------------SEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCC---CcEEEEEecCC--------------------------------Ccc
Confidence 4678999999999999999999999999764 56665555433 289
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++++||++||++++
T Consensus 162 ~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANF 177 (391)
T ss_dssp EEEECTTSSEEEEEET
T ss_pred eEEECCCCCEEEEEeC
Confidence 9999999999999985
No 40
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.36 E-value=2.3e-06 Score=71.65 Aligned_cols=86 Identities=19% Similarity=0.252 Sum_probs=61.3
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+-.+... |+ .||+++|..++|++.| +++.+.+++|.++|.... ....++.-...|+-
T Consensus 154 ~nele~~-dg-~lyvn~~~~~~V~vID---~~tg~V~~~I~~~g~~~~------------------~~~~~~~~~~v~nG 210 (266)
T 2iwa_A 154 LNELEYI-NG-EVWANIWQTDCIARIS---AKDGTLLGWILLPNLRKK------------------LIDEGFRDIDVLNG 210 (266)
T ss_dssp EEEEEEE-TT-EEEEEETTSSEEEEEE---TTTCCEEEEEECHHHHHH------------------HHHTTCTTCCCEEE
T ss_pred ceeEEEE-CC-EEEEecCCCCeEEEEE---CCCCcEEEEEECCCcccc------------------cccccccccCceEE
Confidence 3455666 55 8999999999999888 667999999999763100 00000011123899
Q ss_pred EEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCC
Q 031020 85 IQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEK 128 (167)
Q Consensus 85 ~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~ 128 (167)
+++++||+|||||| +....|+.+++.+..
T Consensus 211 Ia~~~~~~~lfVTg---------------k~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 211 IAWDQENKRIFVTG---------------KLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEETTTTEEEEEE---------------TTCSEEEEEEEEECC
T ss_pred EEEcCCCCEEEEEC---------------CCCCeEEEEEEeccc
Confidence 99999999999999 457788888886543
No 41
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.36 E-value=3.9e-07 Score=74.30 Aligned_cols=98 Identities=12% Similarity=0.135 Sum_probs=67.4
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEE--EEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQ--IWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~--v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
-+..|++|+|+++||++|. .|.+||... .++... +..+ |. .
T Consensus 226 ~p~~la~~~d~~~lyv~~~---~v~~~d~~t---~~~~~~~~~~~~---------------------------~~----~ 268 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN---DIWRMPVEA---DRVPVRPFLEFR---------------------------DT----K 268 (328)
T ss_dssp CCEEEEECTTSCEEEEESS---SEEEEETTC---SSCCSSCSBCCC---------------------------SS----C
T ss_pred CceeEEEecCCCEEEEEcc---EEEEEECCC---CceeeeeeecCC---------------------------CC----c
Confidence 4789999999999999996 899999753 222110 1111 12 3
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceeeeec
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRY 156 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he~r~ 156 (167)
|..++++|++++|||||. ..| ..++.+.++|. + |++. .. +.-|..|.+-+++||.--
T Consensus 269 p~gi~vdp~~g~lyva~~-------~~y----~~~~~V~v~d~--~-g~~~--~~--i~~G~~P~~~~~~~~~~~ 325 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADA-------IDY----QQQGIVYRYSP--Q-GKLI--DE--FYVGIIPGAFCWKLEHHH 325 (328)
T ss_dssp EEEEEECTTTCCEEEEEC-------TTS----SSEEEEEEECT--T-CCEE--EE--EEEEESEEEEEEECCCCC
T ss_pred eEEEEEcCCCCeEEEEcc-------ccc----ccCCEEEEECC--C-CCEE--EE--EEeccCcceEEEeccccc
Confidence 999999999999999993 111 13567777877 3 6542 33 345888888888888643
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.32 E-value=6.8e-06 Score=65.73 Aligned_cols=62 Identities=27% Similarity=0.432 Sum_probs=50.4
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+..+.+|+|+++||+++...+.|++||+.. .+....+..++ .|
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~~~--------------------------------~~ 118 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS---NTVAGTVKTGK--------------------------------SP 118 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEECSS--------------------------------SE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCC---CeEEEEEeCCC--------------------------------Cc
Confidence 35688999999999999999899999999764 45555544332 28
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
..+++|+||++||++++
T Consensus 119 ~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNN 135 (391)
T ss_dssp EEEEECTTSSEEEEEET
T ss_pred ceEEECCCCCEEEEEeC
Confidence 89999999999999984
No 43
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.31 E-value=3e-06 Score=78.95 Aligned_cols=105 Identities=19% Similarity=0.138 Sum_probs=71.6
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCC-------CCCeEEEEEEeC---ceeecCCceeEeeCCCCCCCCCCcccc
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDP-------KNPVLTGQIWVG---GLFRKGSPVVAVTDDGQPYQSDVPEVQ 74 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp-------~~pklvg~v~~G---G~~~~~~~v~v~~~~~~~~~p~~~~~~ 74 (167)
+-.+++++|| ++|++|++.++|.+|++... ...+.+.++.++ |...
T Consensus 333 P~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~----------------------- 388 (595)
T 1fwx_A 333 PLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK----------------------- 388 (595)
T ss_dssp EEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE-----------------------
T ss_pred cceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce-----------------------
Confidence 4568999999 99999999999999999751 124678888886 3111
Q ss_pred CccCCCCCceEEEccCCCEEEEEeCCCcccc-ccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCC
Q 031020 75 GHRLRGGPQMIQLSLDGKRLYVTNSLFSAWD-CQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDG 147 (167)
Q Consensus 75 g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD-~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~g 147 (167)
+....++++|||+||++|. +. ..|-|-.-.+=.+-..||+ .+|+|+|-.+..+ +.||..
T Consensus 389 ------~~~g~t~~~DGk~l~~~Nk----~skdr~~~~gp~~~~~~ql~di--s~~~m~lv~d~p~--~~ePh~ 448 (595)
T 1fwx_A 389 ------TVMGETLDATNDWLVCLSK----FSKDRFLNVGPLKPENDQLIDI--SGDKMVLVHDGPT--FAEPHD 448 (595)
T ss_dssp ------ETTTTSTTCCSSEEEEEES----CCTTSSCCCCSSCCEEEEEEEC--SSSSCEEEEEEEE--SSCCCC
T ss_pred ------eccceEeCCCCCEEEEcCC----CCccccccCCCCCCCcceEEEc--CCCcEEEEEEEcC--CCCCCc
Confidence 1344568999999999994 22 1221111111122244777 7889999999988 466654
No 44
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.24 E-value=7.6e-06 Score=65.24 Aligned_cols=82 Identities=15% Similarity=0.321 Sum_probs=56.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEE-EEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLT-GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklv-g~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+..|++|+|+++||+++...+.|++||++ +...++. .++..- +. ...+.|
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d-~~~G~~~~~~~~~~--~~-------------------------~~~~~p 201 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYD-LQTGQISNRRSVYK--LE-------------------------KEEQIP 201 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEEC-TTTCCEEEEEEEEE--CC-------------------------GGGCEE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEecc-CCCCcccCcEEEEE--CC-------------------------CCCCCC
Confidence 356899999999999999999999999985 2333332 122210 00 011349
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l 131 (167)
.-|+++++| +||||+. .++.+.++|. ++|.+
T Consensus 202 ~g~~~d~~G-~lwva~~---------------~~~~v~~~d~--~tG~~ 232 (297)
T 3g4e_A 202 DGMCIDAEG-KLWVACY---------------NGGRVIRLDP--VTGKR 232 (297)
T ss_dssp EEEEEBTTS-CEEEEEE---------------TTTEEEEECT--TTCCE
T ss_pred CeeEECCCC-CEEEEEc---------------CCCEEEEEcC--CCceE
Confidence 999999999 6999983 4566776655 56665
No 45
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=2.9e-06 Score=77.05 Aligned_cols=108 Identities=17% Similarity=0.198 Sum_probs=73.8
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEecc-------CCCC-----CeE---EEEE-EeCceeecCCceeEeeCCCCCCCC
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIE-------DPKN-----PVL---TGQI-WVGGLFRKGSPVVAVTDDGQPYQS 68 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIs-------dp~~-----pkl---vg~v-~~GG~~~~~~~v~v~~~~~~~~~p 68 (167)
+..|++++++++||++++.++.|.+||+. .... +.. ..++ .++.
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~-------------------- 308 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD-------------------- 308 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS--------------------
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC--------------------
Confidence 35788999999999999999999999986 2111 110 1222 2211
Q ss_pred CCccccCccCCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEe-ccCC--C
Q 031020 69 DVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVD-FEAE--P 145 (167)
Q Consensus 69 ~~~~~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vD-f~~~--p 145 (167)
.++|.-++++++|++||||.+ .+..|.+++.|..++.+. ++.-++- ++.. .
T Consensus 309 ----------~~~p~~ia~~p~G~~lYvaD~---------------~~h~I~kid~dg~~~~~~-~~~~~aG~~g~~G~~ 362 (496)
T 3kya_A 309 ----------PSWEFQIFIHPTGKYAYFGVI---------------NNHYFMRSDYDEIKKEFI-TPYNFVGGYKQSGYR 362 (496)
T ss_dssp ----------SSCCEEEEECTTSSEEEEEET---------------TTTEEEEEEEETTTTEEC-CCEEEEEBTTBCCCB
T ss_pred ----------CCCceEEEEcCCCCEEEEEeC---------------CCCEEEEEecCCCcceec-ccEEecCCCCCCccc
Confidence 124999999999999999993 578999999998777542 1222222 1221 2
Q ss_pred CCCcceeeeecCC
Q 031020 146 DGPALAHEMRYPG 158 (167)
Q Consensus 146 ~gp~~~he~r~pg 158 (167)
+||...-++.+|-
T Consensus 363 DG~~~~a~f~~P~ 375 (496)
T 3kya_A 363 DDVGTEARMNNPC 375 (496)
T ss_dssp CCBGGGCBCSSEE
T ss_pred CCcccccccCCCe
Confidence 5777777788887
No 46
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.22 E-value=5.5e-06 Score=66.68 Aligned_cols=56 Identities=16% Similarity=0.162 Sum_probs=40.4
Q ss_pred ecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEccC
Q 031020 11 SLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLD 90 (167)
Q Consensus 11 S~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS~D 90 (167)
|+|+++|||+++..+.|.+||++..........+..+ ..|+.|++++|
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~--------------------------------~~P~gi~vd~d 222 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ--------------------------------TNIDDFAFDVE 222 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES--------------------------------CCCSSEEEBTT
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc--------------------------------CCCCCeEECCC
Confidence 9999999999999999999998742111111111111 13999999999
Q ss_pred CCEEEEEeC
Q 031020 91 GKRLYVTNS 99 (167)
Q Consensus 91 GkrLyVaNs 99 (167)
| +|||||.
T Consensus 223 G-~l~va~~ 230 (306)
T 2p4o_A 223 G-NLYGATH 230 (306)
T ss_dssp C-CEEEECB
T ss_pred C-CEEEEeC
Confidence 9 5899993
No 47
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.17 E-value=6.6e-06 Score=71.49 Aligned_cols=81 Identities=19% Similarity=0.300 Sum_probs=60.4
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+.+|++++++..|||+.+..+.|++||.. ..++..++..-+. .++|..
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~---~g~~~~~~~~~~~-----------------------------~~~~~~ 277 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPA---TGTLTEEEVMMDT-----------------------------KGSNFH 277 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTT---TCCEEEEEEECSC-----------------------------CSSCEE
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECC---CCeEEEEEeccCC-----------------------------CCCccc
Confidence 56789999888999999999999999954 2444233322220 112566
Q ss_pred EEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 85 IQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 85 ~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
+++++||++|||+++ .+..|.+++.|..+|.+.
T Consensus 278 ia~dpdG~~LYvad~---------------~~~~I~~~~~d~~~~~~~ 310 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYN---------------GKHCIYRVDYNRETGKLA 310 (433)
T ss_dssp EEECTTSSEEEEEET---------------TTTEEEEEEBCTTTCCBC
T ss_pred EEEeCCCCEEEEEeC---------------CCCEEEEEeCCCCCcccC
Confidence 999999999999993 577899999998777653
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.16 E-value=1.9e-05 Score=63.94 Aligned_cols=62 Identities=27% Similarity=0.373 Sum_probs=51.3
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..+..+.+|+|+++||+++...+.|.+||+.. .++...+..++ .|
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~~~--------------------------------~~ 347 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPVFD--------------------------------KP 347 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEECSS--------------------------------SE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecCCC--------------------------------CC
Confidence 34678999999999999999999999999764 56665555333 28
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
..+++|+||++||++++
T Consensus 348 ~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEEECTTSSEEEEEEC
T ss_pred CeEEEcCCCCEEEEEec
Confidence 89999999999999995
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.15 E-value=2.5e-05 Score=63.24 Aligned_cols=73 Identities=15% Similarity=0.201 Sum_probs=57.0
Q ss_pred CceeEEEEecCCCEEEEEeCCC--------------CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLH--------------GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS 68 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~h--------------g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p 68 (167)
.-+..|.+|+|+++||+++... |.|++||+.. .+++..+..++
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~---~~~~~~~~~~~-------------------- 401 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT---DTVKEFWEAGN-------------------- 401 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT---TEEEEEEECSS--------------------
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC---CcEEEEecCCC--------------------
Confidence 3467899999999999999874 5899999654 66666665432
Q ss_pred CCccccCccCCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 69 DVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 69 ~~~~~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
. |..+++|+||++||++++ ..+.+..++++
T Consensus 402 --------~----~~~~~~s~dg~~l~~~~~---------------~d~~i~v~~~~ 431 (433)
T 3bws_A 402 --------Q----PTGLDVSPDNRYLVISDF---------------LDHQIRVYRRD 431 (433)
T ss_dssp --------S----EEEEEECTTSCEEEEEET---------------TTTEEEEEEET
T ss_pred --------C----CceEEEcCCCCEEEEEEC---------------CCCeEEEEEec
Confidence 2 899999999999999983 34567667774
No 50
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.14 E-value=1.9e-05 Score=61.69 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=47.2
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|++++++++||++++..+.|.+++.+. ...+.. +..+. . .|+
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~--~~~~~---------------------------~----~P~ 125 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDG-TQRRVL--FDTGL---------------------------V----NPR 125 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEE--ECSSC---------------------------S----SEE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCC-CCEEEE--EECCC---------------------------C----Ccc
Confidence 4688999999999999999999999999753 111111 11110 1 399
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++++++++|||++.
T Consensus 126 ~i~vd~~~g~lyv~~~ 141 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDW 141 (267)
T ss_dssp EEEEETTTTEEEEEEC
T ss_pred EEEEeeCCCEEEEEEC
Confidence 9999999999999994
No 51
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.07 E-value=2.1e-05 Score=60.99 Aligned_cols=73 Identities=15% Similarity=0.225 Sum_probs=55.2
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..+..|++++|| .|||+++..+.|.+||.. +.++...+.+.. ..|
T Consensus 226 ~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~---~g~~~~~~~~~~-------------------------------~~~ 270 (314)
T 1pjx_A 226 GGADGMDFDEDN-NLLVANWGSSHIEVFGPD---GGQPKMRIRCPF-------------------------------EKP 270 (314)
T ss_dssp CEEEEEEEBTTC-CEEEEEETTTEEEEECTT---CBSCSEEEECSS-------------------------------SCE
T ss_pred CCCCceEECCCC-CEEEEEcCCCEEEEEcCC---CCcEeEEEeCCC-------------------------------CCc
Confidence 567889999998 589999999999999854 233444443322 128
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
..+++++||++|||+++ +++.+.+++++
T Consensus 271 ~~i~~~~dg~~l~v~~~---------------~~~~l~~~~~~ 298 (314)
T 1pjx_A 271 SNLHFKPQTKTIFVTEH---------------ENNAVWKFEWQ 298 (314)
T ss_dssp EEEEECTTSSEEEEEET---------------TTTEEEEEECS
T ss_pred eeEEECCCCCEEEEEeC---------------CCCeEEEEeCC
Confidence 99999999999999993 45678888885
No 52
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.05 E-value=4.9e-05 Score=61.37 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=61.5
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCc--------------eeecCC----------ceeEee
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGG--------------LFRKGS----------PVVAVT 60 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG--------------~~~~~~----------~v~v~~ 60 (167)
+..|++++|+..|||+++..+.|++||..+ .+++.++...+ .+...+ .|.+..
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~---G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~ 274 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDT---KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMN 274 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTT---CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEE
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCC---CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEE
Confidence 789999999889999999999999999762 44554442211 111111 122221
Q ss_pred CCCCCCCCCCccccCccCCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeC
Q 031020 61 DDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNS 126 (167)
Q Consensus 61 ~~~~~~~p~~~~~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~ 126 (167)
-...... ...-.+...-..|..+++++|| .||||++ .+..|.+++++.
T Consensus 275 ~~~g~~~--~~~~~~~~~~~~p~~ia~~~dG-~lyvad~---------------~~~~I~~~~~~~ 322 (329)
T 3fvz_A 275 FSSGEII--DVFKPVRKHFDMPHDIVASEDG-TVYIGDA---------------HTNTVWKFTLTE 322 (329)
T ss_dssp TTTCCEE--EEECCSSSCCSSEEEEEECTTS-EEEEEES---------------SSCCEEEEEEEE
T ss_pred cCCCeEE--EEEcCCCCccCCeeEEEECCCC-CEEEEEC---------------CCCEEEEEeCCc
Confidence 1110000 0000001122359999999999 9999994 466888898863
No 53
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.04 E-value=2.1e-05 Score=64.54 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=46.2
Q ss_pred ceeEEEEecCCCEEEEEeCCC-CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h-g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+.+|+++|++++||+++|+. +.|.+++.+- ...+. +-..+ -.+|
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~---~~~~~------------------------------~~~P 166 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYS---LVTEN------------------------------IQWP 166 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEE---EECSS------------------------------CSCE
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEE---EEECC------------------------------CCCc
Confidence 467999999999999999986 8999998642 11111 11111 0249
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
+-+++++++++||+|++
T Consensus 167 ~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDS 183 (316)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred eEEEEeccCCEEEEEEC
Confidence 99999999999999996
No 54
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.00 E-value=1.2e-05 Score=64.66 Aligned_cols=81 Identities=15% Similarity=0.173 Sum_probs=55.2
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeE--EEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVL--TGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pkl--vg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.+.+|.+++||+ |||++|..+.|.+||- . .++ +..+.++. . .
T Consensus 213 ~P~gi~vd~dG~-l~va~~~~~~V~~~~~---~-G~~~~~~~~~~~~---------------------------~----~ 256 (306)
T 2p4o_A 213 NIDDFAFDVEGN-LYGATHIYNSVVRIAP---D-RSTTIIAQAEQGV---------------------------I----G 256 (306)
T ss_dssp CCSSEEEBTTCC-EEEECBTTCCEEEECT---T-CCEEEEECGGGTC---------------------------T----T
T ss_pred CCCCeEECCCCC-EEEEeCCCCeEEEECC---C-CCEEEEeeccccc---------------------------C----C
Confidence 356899999995 7999999999999983 2 233 22222221 1 3
Q ss_pred CceEEEc---cCCCEEEEEeCCCccccccccccccccCcEEEEEEe
Q 031020 82 PQMIQLS---LDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDV 124 (167)
Q Consensus 82 P~~~~LS---~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dv 124 (167)
|..++++ +||++|||||+ .....+.. . ....+.++++++
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~--~~~~~~~~-~-~~~~g~v~~i~~ 298 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTN--GGMFLPPP-T-GVVPANVVRLEV 298 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEEC--TTSSSCCT-T-CCCCEEEEEEEC
T ss_pred ceEEEEecccCCCCEEEEECC--CCcccCCC-c-ccccceEEEEec
Confidence 9999999 89999999997 23333331 1 123456888887
No 55
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.95 E-value=2.8e-05 Score=65.05 Aligned_cols=62 Identities=11% Similarity=0.233 Sum_probs=46.8
Q ss_pred ceeEEEEecCCCEEEEEeCCC-CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h-g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+.+|+++|++++||++.|+. +.|.+++.+.. ..+.. +. .+ -.+|
T Consensus 160 ~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~--~~-~~------------------------------~~~P 205 (349)
T 3v64_C 160 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRII--AD-TH------------------------------LFWP 205 (349)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEES--CC-SS------------------------------CSCE
T ss_pred CcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEE--EE-CC------------------------------CCCc
Confidence 468999999999999999998 99999986531 11111 00 11 1249
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
+-+++++++++||||++
T Consensus 206 nGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred ceEEEeCCCCEEEEEEC
Confidence 99999999999999995
No 56
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.93 E-value=3.8e-05 Score=65.11 Aligned_cols=62 Identities=11% Similarity=0.230 Sum_probs=47.0
Q ss_pred ceeEEEEecCCCEEEEEeCCC-CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h-g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+.+|+++|++++||++.|.. +.|.+++.+.. ..+.+ -..+ -.+|
T Consensus 203 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~---~~~~------------------------------~~~P 248 (386)
T 3v65_B 203 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRII---ADTH------------------------------LFWP 248 (386)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEE---ECSS------------------------------CSCE
T ss_pred CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEE---EECC------------------------------CCCe
Confidence 468999999999999999998 99999986531 11111 1111 1139
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
+-+++++++++||||++
T Consensus 249 nGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp EEEEEEGGGTEEEEEET
T ss_pred eeEEEeCCCCEEEEEEC
Confidence 99999999999999995
No 57
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.88 E-value=5.1e-05 Score=60.91 Aligned_cols=62 Identities=26% Similarity=0.479 Sum_probs=45.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|++|+|+++|||++...+.|++|++......+. ++.. .+.| |.
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~--~~~~------------------------------~~~g-P~ 232 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTA--EVLV------------------------------KIPN-PG 232 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCE--EEEE------------------------------ECSS-EE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCcc--ceEE------------------------------eCCC-CC
Confidence 3568999999999999999999999999875321110 0100 1234 99
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.++++++|+ ||||+.
T Consensus 233 gi~~d~~G~-l~va~~ 247 (322)
T 2fp8_A 233 NIKRNADGH-FWVSSS 247 (322)
T ss_dssp EEEECTTSC-EEEEEE
T ss_pred CeEECCCCC-EEEEec
Confidence 999999996 999983
No 58
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.86 E-value=7.4e-05 Score=62.26 Aligned_cols=54 Identities=17% Similarity=0.135 Sum_probs=45.2
Q ss_pred EEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEE
Q 031020 8 FLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL 87 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~L 87 (167)
.-|+.+++.||+.+|..+.+.+|| +.+.+++++++.++ + + ..|
T Consensus 68 eGi~~~~~~ly~ltw~~~~v~v~D---~~tl~~~~ti~~~~----------------------------~----G--wgl 110 (243)
T 3mbr_X 68 AGIVAWRDRLIQLTWRNHEGFVYD---LATLTPRARFRYPG----------------------------E----G--WAL 110 (243)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEE---TTTTEEEEEEECSS----------------------------C----C--CEE
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEE---CCcCcEEEEEeCCC----------------------------C----c--eEE
Confidence 445567899999999999999999 45699999999865 1 2 567
Q ss_pred ccCCCEEEEEe
Q 031020 88 SLDGKRLYVTN 98 (167)
Q Consensus 88 S~DGkrLyVaN 98 (167)
+.||++||++|
T Consensus 111 t~dg~~L~vSd 121 (243)
T 3mbr_X 111 TSDDSHLYMSD 121 (243)
T ss_dssp EECSSCEEEEC
T ss_pred eeCCCEEEEEC
Confidence 78999999999
No 59
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.85 E-value=5.6e-05 Score=61.72 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=49.4
Q ss_pred ceeEEEEecCCCEEEEEeC---CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc---
Q 031020 4 LITDFLISLDDRFLYFSNW---LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR--- 77 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw---~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~--- 77 (167)
.+.+|++++++.++||++. ..+.|.+||... .++...+ .+... ....|-...+.|+.
T Consensus 121 ~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~---g~~~r~~--~~~~~------------~~~~~~~~~~~g~~~~~ 183 (343)
T 2qe8_A 121 FVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT---GLAARVL--QGYPG------------IAPEDIDLVIDGVPVQI 183 (343)
T ss_dssp CCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT---CCEEEEC--TTCTT------------TSCCSCCCEETTEECBE
T ss_pred ccceEEEecCCCEEEEEcCccCCCCeEEEEECCC---CCEEEEe--cCCCc------------ccccccceeECCEEEEe
Confidence 4589999999999999999 889999999753 2332211 11000 00000001111211
Q ss_pred ---------CCCCCceEEEccCCCEEEEEeC
Q 031020 78 ---------LRGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 78 ---------~~g~P~~~~LS~DGkrLyVaNs 99 (167)
+..+|+-+++|+||++||++++
T Consensus 184 ~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~ 214 (343)
T 2qe8_A 184 GQPDGTVIRPHLGVNGIVLDAENEWLYLSPM 214 (343)
T ss_dssp ECTTSCEECCCCCEEEEEECTTSCEEEEEES
T ss_pred ccCCCceeceecccceeEeccCCCEEEEEeC
Confidence 2245899999999999999984
No 60
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.85 E-value=0.00023 Score=56.62 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=26.8
Q ss_pred ceeEEEEecCCCEEEEEeCCC-----CcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLH-----GDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h-----g~I~qyDIsd 34 (167)
.+..|++|+|++.||+++..+ +.|++|++..
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 356799999999999999874 7999999874
No 61
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.85 E-value=0.00015 Score=57.17 Aligned_cols=82 Identities=21% Similarity=0.216 Sum_probs=56.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|.+++||+ ||++++..+.|.+||.+ .+....+.+++.. .|. ...|.
T Consensus 234 ~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~----g~~~~~~~~~~~~-----------------------~g~--~~~~~ 283 (333)
T 2dg1_A 234 GPDSCCIDSDDN-LYVAMYGQGRVLVFNKR----GYPIGQILIPGRD-----------------------EGH--MLRST 283 (333)
T ss_dssp EEEEEEEBTTCC-EEEEEETTTEEEEECTT----SCEEEEEECTTGG-----------------------GTC--SCBCC
T ss_pred CCCceEECCCCC-EEEEEcCCCEEEEECCC----CCEEEEEEcCCCc-----------------------ccc--ccCcc
Confidence 567899999996 89999998999999852 3455555443210 000 01389
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
.+++++||++|||+++--. ...++.+++++++
T Consensus 284 ~~~~~~dg~~L~v~~~~g~----------~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 284 HPQFIPGTNQLIICSNDIE----------MGGGSMLYTVNGF 315 (333)
T ss_dssp EEEECTTSCEEEEEEECGG----------GTCCEEEEEEECS
T ss_pred eEEECCCCCEEEEEeCccC----------CCCCceEEEEecc
Confidence 9999999999999985110 0236788888875
No 62
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.84 E-value=8.4e-05 Score=63.49 Aligned_cols=61 Identities=20% Similarity=0.321 Sum_probs=45.8
Q ss_pred eeEEEEecCCCEEEEEeCCC-CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 5 ITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~h-g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
+.+|++.|.+++||++.|+. +.|.+++.+.. ..+.. -.++ + .+|+
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~---~~~~-l-----------------------------~~P~ 249 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL---VTEN-I-----------------------------QWPN 249 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEE---ECSS-C-----------------------------SCEE
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEE---EECC-C-----------------------------CceE
Confidence 67999999999999999984 88998886531 11111 1111 0 1399
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
-+++++++++||||++
T Consensus 250 glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDS 265 (400)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred EEEEEeCCCEEEEEEC
Confidence 9999999999999995
No 63
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.83 E-value=5.5e-05 Score=64.28 Aligned_cols=53 Identities=17% Similarity=0.197 Sum_probs=44.8
Q ss_pred EEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEc
Q 031020 9 LISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS 88 (167)
Q Consensus 9 ~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS 88 (167)
-|+++++.||+++|..+.+.+|| +++.+++++++.++ +-..|+
T Consensus 100 Git~~g~~Ly~ltw~~~~v~V~D---~~Tl~~~~ti~~~~----------------------------------eGwGLt 142 (268)
T 3nok_A 100 GLASDGERLYQLTWTEGLLFTWS---GMPPQRERTTRYSG----------------------------------EGWGLC 142 (268)
T ss_dssp EEEECSSCEEEEESSSCEEEEEE---TTTTEEEEEEECSS----------------------------------CCCCEE
T ss_pred EEEEeCCEEEEEEccCCEEEEEE---CCcCcEEEEEeCCC----------------------------------ceeEEe
Confidence 35668899999999999999999 45699999998754 235677
Q ss_pred cCCCEEEEEe
Q 031020 89 LDGKRLYVTN 98 (167)
Q Consensus 89 ~DGkrLyVaN 98 (167)
.||++||++|
T Consensus 143 ~Dg~~L~vSd 152 (268)
T 3nok_A 143 YWNGKLVRSD 152 (268)
T ss_dssp EETTEEEEEC
T ss_pred cCCCEEEEEC
Confidence 9999999999
No 64
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.80 E-value=0.00017 Score=58.63 Aligned_cols=33 Identities=24% Similarity=0.525 Sum_probs=26.0
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCC
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKG 129 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G 129 (167)
|+.+++|+||++||++++ ....+.++|+++++|
T Consensus 181 ~~~i~~s~dg~~lyv~~~---------------~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDT---------------KVNRLMRVPLDARTG 213 (326)
T ss_dssp EEEEEECTTSCEEEEEET---------------TTCEEEEEEBCTTTC
T ss_pred cCCeEEcCCCCEEEEEEC---------------CCCEEEEEEcccccC
Confidence 889999999999999984 345677777764455
No 65
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.80 E-value=0.00015 Score=58.43 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=56.6
Q ss_pred ceeEEEEecCCCEEEEEeC-CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNW-LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw-~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+.+|++++++..|||++. ..+.|++||.+ .++...+...|. + ..+.+. + -..|
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~----g~~~~~~~~~g~---~------------~~~~~~-----~-~~~p 198 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS----GKFVTQWGEESS---G------------SSPRPG-----Q-FSVP 198 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTT----SCEEEEECEECC---S------------SSCCTT-----E-ESCE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC----CCEEEEeccCCC---C------------CCCCCc-----c-cCCC
Confidence 4789999998888999995 89999999932 344444432221 0 000000 0 1139
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l 131 (167)
..+++++|+.+||||++ .+..+.++|.+ +|.+
T Consensus 199 ~gia~d~~~g~l~v~d~---------------~~~~I~~~~~~--~G~~ 230 (329)
T 3fvz_A 199 HSLALVPHLDQLCVADR---------------ENGRIQCFKTD--TKEF 230 (329)
T ss_dssp EEEEEETTTTEEEEEET---------------TTTEEEEEETT--TCCE
T ss_pred cEEEEECCCCEEEEEEC---------------CCCEEEEEECC--CCcE
Confidence 99999999999999994 35566667663 4443
No 66
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.78 E-value=9.4e-05 Score=61.60 Aligned_cols=62 Identities=15% Similarity=0.347 Sum_probs=45.9
Q ss_pred ceeEEEEecCCCEEEEEeCC-CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~-hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+.+|++.+.+++||++.|+ .+.|.+++.+-. ..+. +-..+ + ..|
T Consensus 123 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~---~~~~~-l-----------------------------~~P 168 (318)
T 3sov_A 123 QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFI---IINSE-I-----------------------------YWP 168 (318)
T ss_dssp SEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEE---EECSS-C-----------------------------SCE
T ss_pred CccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEE---EEECC-C-----------------------------CCc
Confidence 36789999999999999997 688998886521 1111 11111 0 139
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
+-+++++++++||+|++
T Consensus 169 nglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADA 185 (318)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred cEEEEeccCCEEEEEEC
Confidence 99999999999999995
No 67
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.76 E-value=0.00015 Score=61.18 Aligned_cols=63 Identities=24% Similarity=0.386 Sum_probs=48.0
Q ss_pred CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEccCCC
Q 031020 13 DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGK 92 (167)
Q Consensus 13 DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS~DGk 92 (167)
|| .||+++|..++|.+.| |++.+.++.|.+.|..... + . ....+ ..|+-++++++++
T Consensus 181 ~G-~lyan~w~~~~I~vID---p~tG~V~~~Id~~~L~~~~---------~-~-----~~~~~----~vlNGIA~dp~~~ 237 (262)
T 3nol_A 181 DG-EIFANVWQTNKIVRID---PETGKVTGIIDLNGILAEA---------G-P-----LPSPI----DVLNGIAWDKEHH 237 (262)
T ss_dssp TT-EEEEEETTSSEEEEEC---TTTCBEEEEEECTTGGGGS---------C-S-----CCSSC----CCEEEEEEETTTT
T ss_pred CC-EEEEEEccCCeEEEEE---CCCCcEEEEEECCcCcccc---------c-c-----ccCcC----CceEEEEEcCCCC
Confidence 55 6999999999999877 7889999999998843110 0 0 00111 2399999999999
Q ss_pred EEEEEe
Q 031020 93 RLYVTN 98 (167)
Q Consensus 93 rLyVaN 98 (167)
|||||.
T Consensus 238 ~lfVTG 243 (262)
T 3nol_A 238 RLFVTG 243 (262)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999999
No 68
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.76 E-value=8.9e-05 Score=61.78 Aligned_cols=64 Identities=19% Similarity=0.277 Sum_probs=48.0
Q ss_pred CCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEccCCCE
Q 031020 14 DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKR 93 (167)
Q Consensus 14 dRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS~DGkr 93 (167)
+..||+++|..++|++.| |++.+.+++|.++|..... . + .....+. -|+-++++++++|
T Consensus 159 ~G~lyanvw~s~~I~vID---p~tG~V~~~idl~~l~~~~-----------~-~--~~~~~~~----vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 159 NGELLANVWLTSRIARID---PASGKVVAWIDLQALVPDA-----------D-A--LTDSTND----VLNGIAFDAEHDR 217 (243)
T ss_dssp TTEEEEEETTTTEEEEEC---TTTCBEEEEEECGGGSTTT-----------T-S--CCCTTSS----CEEEEEEETTTTE
T ss_pred CCEEEEEECCCCeEEEEE---CCCCCEEEEEECCcCcccc-----------c-c--ccCCcCC----ceEEEEEcCCCCE
Confidence 456999999999999777 7889999999999843110 0 0 0011122 3899999999999
Q ss_pred EEEEe
Q 031020 94 LYVTN 98 (167)
Q Consensus 94 LyVaN 98 (167)
||||.
T Consensus 218 lfVTG 222 (243)
T 3mbr_X 218 LFVTG 222 (243)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99999
No 69
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.74 E-value=7.8e-05 Score=62.97 Aligned_cols=54 Identities=17% Similarity=0.033 Sum_probs=44.8
Q ss_pred EEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEE
Q 031020 8 FLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL 87 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~L 87 (167)
.-|+++++.||+++|..+.+.+|| +++.+++++++.++ +-..|
T Consensus 90 eGit~~g~~ly~ltw~~~~v~v~D---~~t~~~~~ti~~~~----------------------------------eG~gl 132 (262)
T 3nol_A 90 EGISDWKDKIVGLTWKNGLGFVWN---IRNLRQVRSFNYDG----------------------------------EGWGL 132 (262)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEE---TTTCCEEEEEECSS----------------------------------CCCCE
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEE---CccCcEEEEEECCC----------------------------------CceEE
Confidence 345667899999999999999999 45589999999865 22467
Q ss_pred ccCCCEEEEEe
Q 031020 88 SLDGKRLYVTN 98 (167)
Q Consensus 88 S~DGkrLyVaN 98 (167)
+.||++||++|
T Consensus 133 t~dg~~L~~Sd 143 (262)
T 3nol_A 133 THNDQYLIMSD 143 (262)
T ss_dssp EECSSCEEECC
T ss_pred ecCCCEEEEEC
Confidence 78999999999
No 70
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.74 E-value=0.00027 Score=55.23 Aligned_cols=72 Identities=14% Similarity=0.252 Sum_probs=53.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+.+..|.+++||+ |||++ .+.|.+||.+ .++..++.+.. + |
T Consensus 218 ~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~----g~~~~~~~~~~-------------------------------~-~ 258 (296)
T 3e5z_A 218 GKTDGLRVDAGGL-IWASA--GDGVHVLTPD----GDELGRVLTPQ-------------------------------T-T 258 (296)
T ss_dssp SCCCSEEEBTTSC-EEEEE--TTEEEEECTT----SCEEEEEECSS-------------------------------C-C
T ss_pred CCCCeEEECCCCC-EEEEc--CCeEEEECCC----CCEEEEEECCC-------------------------------C-c
Confidence 4566899999997 89999 7889999843 45665655433 1 8
Q ss_pred ceEEE-ccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 83 QMIQL-SLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 83 ~~~~L-S~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
..+++ ++||++|||+++ ..+++++. ++.+|+
T Consensus 259 ~~~~f~~~d~~~L~v~t~-----------------~~l~~~~~--~~~~~~ 290 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVS-----------------TEFWSIET--NVRGLE 290 (296)
T ss_dssp CEEEEESTTSCEEEEEET-----------------TEEEEEEC--SCCBCC
T ss_pred eeEEEECCCCCEEEEEcC-----------------CeEEEEEc--cccccc
Confidence 88888 699999999993 25666665 666654
No 71
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.72 E-value=0.00018 Score=62.30 Aligned_cols=87 Identities=18% Similarity=0.172 Sum_probs=56.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+-.|++|||+|+|||+....+.|++|++...........+.+ .|.|.
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~--------------------------------~g~PD 269 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF--------------------------------DTLVD 269 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC--------------------------------SSEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC--------------------------------CCCCc
Confidence 4678999999999999999999999999985322221212222 23499
Q ss_pred eEEEcc-CCCEEEEEeCCCccccccccccccccCcEEEEEEe
Q 031020 84 MIQLSL-DGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDV 124 (167)
Q Consensus 84 ~~~LS~-DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dv 124 (167)
.++++. +|+ ||||...-...=-.+-|+. ..++.+++|..
T Consensus 270 Gi~vD~e~G~-lwva~~~~g~~v~~~~P~~-~~~s~v~rI~~ 309 (355)
T 3sre_A 270 NISVDPVTGD-LWVGCHPNGMRIFFYDAEN-PPGSEVLRIQD 309 (355)
T ss_dssp EEEECTTTCC-EEEEEESCHHHHHSCCTTS-CCCEEEEEEEC
T ss_pred eEEEeCCCCc-EEEEecCCceEEEEECCCC-CCCCEEEEEEc
Confidence 999999 586 7776521100001122332 34888888875
No 72
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.68 E-value=0.00011 Score=62.47 Aligned_cols=64 Identities=19% Similarity=0.282 Sum_probs=48.0
Q ss_pred CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEccCCC
Q 031020 13 DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGK 92 (167)
Q Consensus 13 DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS~DGk 92 (167)
|| .||+++|..++|.+.| |++.+.+++|.++|.....+ .+ . .....-|+-++++++++
T Consensus 190 dG-~lyanvw~s~~I~vID---p~TG~V~~~Idl~~L~~~~~-----------~~---~----~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 190 NG-VIYANIWHSSDVLEID---PATGTVVGVIDASALTRAVA-----------GQ---V----TNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp TT-EEEEEETTCSEEEEEC---TTTCBEEEEEECHHHHHHHT-----------TT---C----CCTTCCEEEEEECTTTC
T ss_pred CC-EEEEEECCCCeEEEEe---CCCCcEEEEEECCCCccccc-----------cc---c----cCcCCceEEEEEcCCCC
Confidence 66 6999999999999877 78899999999998431100 00 0 00112389999999999
Q ss_pred EEEEEe
Q 031020 93 RLYVTN 98 (167)
Q Consensus 93 rLyVaN 98 (167)
|||||.
T Consensus 248 rlfVTG 253 (268)
T 3nok_A 248 RIFMTG 253 (268)
T ss_dssp CEEEEE
T ss_pred EEEEeC
Confidence 999999
No 73
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.67 E-value=0.00048 Score=57.73 Aligned_cols=63 Identities=14% Similarity=0.168 Sum_probs=44.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+.+|++++||| |||+.+. |.|.+++ + ...+.+..+++ ...| .++|.
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~-g~I~~i~--~-g~~~~~~~~~v-------------------------~~~g---~~~p~ 78 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERP-GRIRLFR--E-GRLSTYAELSV-------------------------YHRG---ESGLL 78 (352)
T ss_dssp CEEEEEECTTSC-EEEEETT-TEEEEEE--T-TEEEEEEECCC-------------------------CCST---TCSEE
T ss_pred CceEEEEcCCCe-EEEEeCC-CeEEEEE--C-CCccEeecceE-------------------------eecC---CCCce
Confidence 367899999998 9999986 8999888 3 22222222211 0011 23599
Q ss_pred eEEEccC---CCEEEEEeC
Q 031020 84 MIQLSLD---GKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~D---GkrLyVaNs 99 (167)
.+++++| +++|||+++
T Consensus 79 gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 79 GLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp EEEECTTTTTSCEEEEEEE
T ss_pred eEEECCCCCCCCEEEEEEe
Confidence 9999999 999999995
No 74
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.64 E-value=0.00024 Score=61.61 Aligned_cols=48 Identities=17% Similarity=0.230 Sum_probs=35.1
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCC
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDG 147 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~g 147 (167)
|+-+++||||++||||++ ....+.+++++ .+|.++.-..| ++...|+|
T Consensus 223 pNGia~spDg~~lYvadt---------------~~~~I~~~~~~-~~g~l~~~~~~--~~~g~PDG 270 (355)
T 3sre_A 223 ANGINISPDGKYVYIAEL---------------LAHKIHVYEKH-ANWTLTPLRVL--SFDTLVDN 270 (355)
T ss_dssp EEEEEECTTSSEEEEEEG---------------GGTEEEEEEEC-TTSCEEEEEEE--ECSSEEEE
T ss_pred cCcceECCCCCEEEEEeC---------------CCCeEEEEEEC-CCCcEecCEEE--eCCCCCce
Confidence 999999999999999995 35678889987 46766543333 55444444
No 75
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.63 E-value=0.00014 Score=55.29 Aligned_cols=71 Identities=10% Similarity=0.144 Sum_probs=51.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|.+++|| .|||+++..+.|.+|+.... +.. .+..++ ...|.
T Consensus 193 ~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~---~~~-~~~~~~------------------------------~~~p~ 237 (270)
T 1rwi_B 193 APWGIAVDEAG-TVYVTEHNTNQVVKLLAGST---TST-VLPFTG------------------------------LNTPL 237 (270)
T ss_dssp SEEEEEECTTC-CEEEEETTTSCEEEECTTCS---CCE-ECCCCS------------------------------CSCEE
T ss_pred CceEEEECCCC-CEEEEECCCCcEEEEcCCCC---cce-eeccCC------------------------------CCCce
Confidence 46889999999 89999999999999996531 111 111111 01399
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
.+++++||+ |||+++ .+..|..++.+
T Consensus 238 ~i~~~~~g~-l~v~~~---------------~~~~v~~~~~~ 263 (270)
T 1rwi_B 238 AVAVDSDRT-VYVADR---------------GNDRVVKLTSL 263 (270)
T ss_dssp EEEECTTCC-EEEEEG---------------GGTEEEEECCC
T ss_pred eEEECCCCC-EEEEEC---------------CCCEEEEEcCC
Confidence 999999996 999994 45677777774
No 76
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.62 E-value=0.00025 Score=57.63 Aligned_cols=61 Identities=18% Similarity=0.334 Sum_probs=47.8
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+.+..|.++.||+ |||++|..+.|.+||.+ .++..++.+.. .. |
T Consensus 230 ~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~----g~~~~~i~~~~---------------------------~~----~ 273 (326)
T 2ghs_A 230 GGMDGSVCDAEGH-IWNARWGEGAVDRYDTD----GNHIARYEVPG---------------------------KQ----T 273 (326)
T ss_dssp SEEEEEEECTTSC-EEEEEETTTEEEEECTT----CCEEEEEECSC---------------------------SB----E
T ss_pred CCCCeeEECCCCC-EEEEEeCCCEEEEECCC----CCEEEEEECCC---------------------------CC----c
Confidence 4567899999995 99999999999999852 45555665433 12 8
Q ss_pred ceEEEc-cCCCEEEEEeC
Q 031020 83 QMIQLS-LDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS-~DGkrLyVaNs 99 (167)
..++++ +|+++|||+++
T Consensus 274 ~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 274 TCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEESTTSCEEEEEEB
T ss_pred EEEEEecCCCCEEEEEec
Confidence 899998 99999999985
No 77
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.61 E-value=0.00042 Score=56.67 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=64.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|+++++++.||++.+..+.|.+||.+. .+.+.+.. .++ .-+.|.
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~--~~~-----------------------------~~~~P~ 212 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILE--DEK-----------------------------RLAHPF 212 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEE--CTT-----------------------------TTSSEE
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEee--cCC-----------------------------ccCCcE
Confidence 4678999999999999999999999999763 22332211 111 011287
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceeeeecC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYP 157 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he~r~p 157 (167)
-+++ |+.+||||+. .+..+.++|. .+|+.. ..+...+ ..|.|-...|+.|-|
T Consensus 213 giav--~~~~ly~~d~---------------~~~~V~~~~~--~~g~~~--~~i~~~~-~~p~~i~v~~~~~qp 264 (316)
T 1ijq_A 213 SLAV--FEDKVFWTDI---------------INEAIFSANR--LTGSDV--NLLAENL-LSPEDMVLFHNLTQP 264 (316)
T ss_dssp EEEE--ETTEEEEEET---------------TTTEEEEEET--TTCCCC--EEEECSC-SCCCCEEEESGGGSC
T ss_pred EEEE--ECCEEEEEEC---------------CCCeEEEEeC--CCCcce--EEEecCC-CCceEEEEeccccCC
Confidence 7777 5789999993 4667877775 556431 1111122 347775566776666
No 78
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.00044 Score=57.53 Aligned_cols=89 Identities=13% Similarity=0.039 Sum_probs=58.0
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC--CCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED--PKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd--p~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.++.|.+++|+++||+++..++.|.+|++++ ....+.+.++...+ .
T Consensus 309 ~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~--------------------------------~ 356 (450)
T 2vdu_B 309 AVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPY--------------------------------N 356 (450)
T ss_dssp CEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSS--------------------------------C
T ss_pred EEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCC--------------------------------c
Confidence 4789999999999999999899999999933 23345566665433 2
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeec
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAIN 134 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~ 134 (167)
+..+++++++ ++++.. .+.-|. .....|-.+.++.++|.++++
T Consensus 357 v~~~~~~~~~--~~v~~~------~~~~~~--~~~~~i~v~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 357 VISLSAHNDE--FQVTLD------NKESSG--VQKNFAKFIEYNLNENSFVVN 399 (450)
T ss_dssp EEEEEEETTE--EEEEEC------CTTCCS--SCCCSEEEEEEETTTTEEEEC
T ss_pred eEEEEecCCc--EEEEEe------cccCCC--CCCcceEEEEEEcCCCeEEEc
Confidence 8899999954 444431 021111 012234445666678887554
No 79
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.57 E-value=0.00029 Score=54.50 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=26.8
Q ss_pred ceeEEEEe----cCCCEEEEEeCCCCcEEEEecc
Q 031020 4 LITDFLIS----LDDRFLYFSNWLHGDIRQYNIE 33 (167)
Q Consensus 4 l~tdI~IS----~DdRfLYVSnw~hg~I~qyDIs 33 (167)
.+..|+++ +|+++||+++...+.|.+||+.
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 35788999 9999999999989999999976
No 80
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.57 E-value=0.00034 Score=59.21 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=66.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|+++++++.||++.+..+.|.+||++. .+.+.+ ...+ .+.|.
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~---~~~~------------------------------~~~P~ 292 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAV---ISQG------------------------------LPHPF 292 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEEECTTS-CSCEEE---ECSS------------------------------CSSEE
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEEEeCCC-CeeEEE---EECC------------------------------CCCce
Confidence 3678999999999999999999999999763 222211 1111 01288
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceeeeecCC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPG 158 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he~r~pg 158 (167)
-+++ ++.+||||+. .+..|.++|. .+|+.. ..+... ...|.|-...|..|-|-
T Consensus 293 giav--~~~~ly~td~---------------~~~~V~~~~~--~~G~~~--~~i~~~-~~~p~gi~v~~~~~q~~ 345 (386)
T 3v65_B 293 AITV--FEDSLYWTDW---------------HTKSINSANK--FTGKNQ--EIIRNK-LHFPMDIHTLHPQRQPA 345 (386)
T ss_dssp EEEE--ETTEEEEEET---------------TTTEEEEEET--TTCCSC--EEEECS-CSCCCCEEEESGGGSCC
T ss_pred EEEE--ECCEEEEeeC---------------CCCeEEEEEC--CCCcce--EEEccC-CCCCceEEEEchhcCcC
Confidence 8888 6779999993 4667877774 455431 111112 24688877888888764
No 81
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.55 E-value=0.00062 Score=56.82 Aligned_cols=98 Identities=19% Similarity=0.186 Sum_probs=66.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|+++++++.||++.+..+.|.+||.+. .+.+.+ ...+ .+.|.
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG-~~~~~~---~~~~------------------------------~~~P~ 249 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAV---ISQG------------------------------LPHPF 249 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEE---ECSS------------------------------CSSEE
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCC-CceEEE---EeCC------------------------------CCCce
Confidence 3678999999999999999999999999763 222211 1111 01288
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe--eecCceeEeccCCCCCCcceeeeecCCC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM--AINPNFFVDFEAEPDGPALAHEMRYPGG 159 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l--~l~~~F~vDf~~~p~gp~~~he~r~pgg 159 (167)
-+++ ++.+||||+. .+..+.++|. .+|+. ++.. . ...|.|-..-|..|-|-|
T Consensus 250 giav--~~~~ly~td~---------------~~~~V~~~~~--~~G~~~~~i~~----~-~~~p~gi~v~~~~~qp~~ 303 (349)
T 3v64_C 250 AITV--FEDSLYWTDW---------------HTKSINSANK--FTGKNQEIIRN----K-LHFPMDIHTLHPQRQPAG 303 (349)
T ss_dssp EEEE--ETTEEEEEET---------------TTTEEEEEET--TTCCSCEEEEC----S-CSCCCCEEEECGGGSCCC
T ss_pred EEEE--ECCEEEEecC---------------CCCeEEEEEc--cCCCccEEecc----C-CCCCceEEEEccccCccc
Confidence 8888 6789999993 4667777764 45543 2221 2 245888777788877643
No 82
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.54 E-value=0.00023 Score=54.03 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=42.2
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+.+|.+++|++ |||+++..+.|.+|+.. ..+..-. ...+ ...|+
T Consensus 109 ~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~---~~~~~~~-~~~~------------------------------~~~p~ 153 (270)
T 1rwi_B 109 YPEGLAVDTQGA-VYVADRGNNRVVKLAAG---SKTQTVL-PFTG------------------------------LNDPD 153 (270)
T ss_dssp SEEEEEECTTCC-EEEEEGGGTEEEEECTT---CCSCEEC-CCCS------------------------------CCSCC
T ss_pred CCcceEECCCCC-EEEEECCCCEEEEEECC---CceeEee-cccc------------------------------CCCce
Confidence 468999999997 99999999999999632 2221100 0011 01399
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.++++++|+ |||+++
T Consensus 154 ~i~~~~~g~-l~v~~~ 168 (270)
T 1rwi_B 154 GVAVDNSGN-VYVTDT 168 (270)
T ss_dssp CEEECTTCC-EEEEEG
T ss_pred eEEEeCCCC-EEEEEC
Confidence 999999997 999984
No 83
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.54 E-value=0.00046 Score=58.86 Aligned_cols=86 Identities=16% Similarity=0.257 Sum_probs=54.3
Q ss_pred EEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEE
Q 031020 7 DFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQ 86 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~ 86 (167)
+|++++++.+|||++...+.|++|+.+. ++ .+..|..-..+ ..+.+. ...+ -..|+.++
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g----~~--~~~~g~~~~~g-------------~~dg~~-~~~~-~~~P~gia 329 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDG----EC--EWFCGSATQKT-------------VQDGLR-EEAL-FAQPNGMT 329 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTC----CE--EEEEECTTCCS-------------CBCEEG-GGCB-CSSEEEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCC----CE--EEEEeCCCCCC-------------cCCCcc-cccE-eCCCeEEE
Confidence 8999999999999999999999998653 11 11222100000 000000 0000 12499999
Q ss_pred EccCCCEEEEEeCCCccccccccccccc-cCcEEEEEEeeCCCCCe
Q 031020 87 LSLDGKRLYVTNSLFSAWDCQFYPELKE-KGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 87 LS~DGkrLyVaNsl~s~wD~Qfyp~~~~-~g~~~~~~dvD~~~G~l 131 (167)
+++||+ ||||+ . .+..|.++|. .+|.+
T Consensus 330 ~d~dG~-lyvad---------------~~~~~~I~~~~~--~~G~v 357 (409)
T 3hrp_A 330 VDEDGN-FYIVD---------------GFKGYCLRKLDI--LDGYV 357 (409)
T ss_dssp ECTTCC-EEEEE---------------TTTTCEEEEEET--TTTEE
T ss_pred EeCCCC-EEEEe---------------CCCCCEEEEEEC--CCCEE
Confidence 999998 99999 3 4667777775 45655
No 84
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.53 E-value=0.00078 Score=52.97 Aligned_cols=18 Identities=44% Similarity=0.514 Sum_probs=16.6
Q ss_pred CceEEEccCCCEEEEEeC
Q 031020 82 PQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNs 99 (167)
|+.+++|+||++|||+++
T Consensus 184 ~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTET 201 (333)
T ss_dssp EEEEEECTTSSEEEEEEG
T ss_pred ccceEECCCCCEEEEEeC
Confidence 889999999999999984
No 85
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.00088 Score=55.71 Aligned_cols=66 Identities=9% Similarity=0.120 Sum_probs=47.9
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..+.+|+|+++|++++-..+.|++||+.. ...+....+..-+ ....+.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~-----------------------------~~~~v~ 153 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDK-TSKNVLKLRKRFC-----------------------------FSKRPN 153 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECS-SSSSCEEEEEEEE-----------------------------CSSCEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcC-CCCceeeeeeccc-----------------------------CCCCce
Confidence 5889999999999988887889999999972 1122333332101 112378
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++||||++|++++.
T Consensus 154 ~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 154 AISIAEDDTTVIIADK 169 (450)
T ss_dssp EEEECTTSSEEEEEET
T ss_pred EEEEcCCCCEEEEEeC
Confidence 8999999999999974
No 86
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.50 E-value=0.00059 Score=52.68 Aligned_cols=61 Identities=3% Similarity=0.018 Sum_probs=44.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+.+|++++|++ |||++...+.|.+||.+ .++...+...+. ...|+
T Consensus 122 ~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~-----------------------------~~~p~ 167 (286)
T 1q7f_A 122 HPRGVTVDNKGR-IIVVECKVMRVIIFDQN----GNVLHKFGCSKH-----------------------------LEFPN 167 (286)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEECTT----SCEEEEEECTTT-----------------------------CSSEE
T ss_pred CceEEEEeCCCC-EEEEECCCCEEEEEcCC----CCEEEEeCCCCc-----------------------------cCCcE
Confidence 468899999997 99999999999999843 233333322110 01399
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++++||+ |||+++
T Consensus 168 ~i~~~~~g~-l~v~~~ 182 (286)
T 1q7f_A 168 GVVVNDKQE-IFISDN 182 (286)
T ss_dssp EEEECSSSE-EEEEEG
T ss_pred EEEECCCCC-EEEEEC
Confidence 999999987 999984
No 87
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.50 E-value=0.0008 Score=53.89 Aligned_cols=18 Identities=22% Similarity=0.237 Sum_probs=17.0
Q ss_pred CceEEEccCCCEEEEEeC
Q 031020 82 PQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNs 99 (167)
|+.+++++||++|||+++
T Consensus 187 p~gia~~~dg~~lyv~d~ 204 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEF 204 (322)
T ss_dssp CCEEEECTTSSEEEEEEG
T ss_pred CcceEECCCCCEEEEEeC
Confidence 999999999999999984
No 88
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.49 E-value=0.00038 Score=59.38 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=53.6
Q ss_pred eeEEEEecCCCEEEEEeC-CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 5 ITDFLISLDDRFLYFSNW-LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw-~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
+.+|++++||+ |||+++ ..+.|++|++.+ .++.-..-.++.. + . .+ ..+.. . --..|+
T Consensus 325 P~gia~d~dG~-lyvad~~~~~~I~~~~~~~---G~v~~~~g~~~~~--g-~------~~--g~~~~--~----~~~~P~ 383 (409)
T 3hrp_A 325 PNGMTVDEDGN-FYIVDGFKGYCLRKLDILD---GYVSTVAGQVDVA--S-Q------ID--GTPLE--A----TFNYPY 383 (409)
T ss_dssp EEEEEECTTCC-EEEEETTTTCEEEEEETTT---TEEEEEEECTTCB--S-C------CC--BSTTT--C----CBSSEE
T ss_pred CeEEEEeCCCC-EEEEeCCCCCEEEEEECCC---CEEEEEeCCCCCC--C-c------CC--CChhc--e----EeCCce
Confidence 78999999998 999999 999999999654 3332111111100 0 0 00 00000 0 012499
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEe
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDV 124 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dv 124 (167)
.+++++| .+||||++ .+..|.++++
T Consensus 384 giavd~~-g~lyVad~---------------~n~~Ir~i~~ 408 (409)
T 3hrp_A 384 DICYDGE-GGYWIAEA---------------WGKAIRKYAV 408 (409)
T ss_dssp EEEECSS-SEEEEEES---------------TTCEEEEEEE
T ss_pred EEEEcCC-CCEEEEEC---------------CCCeEEEEEe
Confidence 9999999 68999993 5778887776
No 89
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.49 E-value=0.00055 Score=50.88 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=43.8
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..+..+.+|||+++|+++. .+.|.+||+..+..++. +..+. -...+
T Consensus 42 ~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~---~~~~~-----------------------------~~~~~ 87 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEK---VDTGF-----------------------------ATICN 87 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEE---CCCTT-----------------------------CCCBC
T ss_pred cceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceE---ecccc-----------------------------ccccc
Confidence 4578899999999999886 67999999875232221 11111 01126
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++||||++|+++.
T Consensus 88 ~~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 88 NDHGISPDGALYAISD 103 (297)
T ss_dssp SCCEECTTSSEEEEEE
T ss_pred cceEECCCCCEEEEEE
Confidence 7799999999999987
No 90
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.48 E-value=0.001 Score=51.29 Aligned_cols=60 Identities=8% Similarity=0.036 Sum_probs=45.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCC-cEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHG-DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg-~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+..|++++|| .|||+++..+ .|.+||.+ .+....+..+.. ...|
T Consensus 208 ~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~----g~~~~~~~~~~~-----------------------------~~~~ 253 (286)
T 1q7f_A 208 YPIGVGINSNG-EILIADNHNNFNLTIFTQD----GQLISALESKVK-----------------------------HAQC 253 (286)
T ss_dssp SEEEEEECTTC-CEEEEECSSSCEEEEECTT----SCEEEEEEESSC-----------------------------CSCE
T ss_pred CCcEEEECCCC-CEEEEeCCCCEEEEEECCC----CCEEEEEcccCC-----------------------------CCcc
Confidence 57899999999 5899999886 99999843 345555544331 0128
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||+ ||||+
T Consensus 254 ~~i~~~~~g~-l~vs~ 268 (286)
T 1q7f_A 254 FDVALMDDGS-VVLAS 268 (286)
T ss_dssp EEEEEETTTE-EEEEE
T ss_pred eeEEECCCCc-EEEEC
Confidence 8999999995 99997
No 91
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.47 E-value=6.5e-05 Score=69.25 Aligned_cols=61 Identities=20% Similarity=0.293 Sum_probs=44.7
Q ss_pred eeEEEEecCCCEEEEEeCCC-CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 5 ITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~h-g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
+.+|++++++++||++.|+. +.|.+++++... .+.+ ...+ -.+|+
T Consensus 498 P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l---~~~~------------------------------l~~Pn 543 (699)
T 1n7d_A 498 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSL---VTEN------------------------------IQWPN 543 (699)
T ss_dssp CCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEE---SCSS------------------------------CSSCC
T ss_pred cceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEE---EeCC------------------------------CCCcc
Confidence 56899999999999999986 889888765311 1111 0011 12499
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
-+++++++++||||++
T Consensus 544 Glavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDS 559 (699)
T ss_dssp CEEECTTTCCEEEEET
T ss_pred EEEEeccCCEEEEEec
Confidence 9999999999999995
No 92
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.47 E-value=0.001 Score=55.28 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=67.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|+++++++.||++.+..+.|.++|.+. .+.+.+. .++ + .+ |.
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~---~~~-~-------------------------~~----P~ 212 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVV---KGS-L-------------------------PH----PF 212 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEE---CSC-C-------------------------SC----EE
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEe---cCC-C-------------------------CC----ce
Confidence 3678999999999999999999999999763 2333221 111 0 12 77
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceeeeecCCC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGG 159 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he~r~pgg 159 (167)
-+++ |+.+||+|+. .+..+.++|. .+|+.. ....... ..|.|-..-|+.|-|.+
T Consensus 213 glav--~~~~lywtd~---------------~~~~V~~~~~--~~G~~~--~~i~~~~-~~P~~i~v~~~~~q~~~ 266 (318)
T 3sov_A 213 ALTL--FEDILYWTDW---------------STHSILACNK--YTGEGL--REIHSDI-FSPMDIHAFSQQRQPNA 266 (318)
T ss_dssp EEEE--ETTEEEEEET---------------TTTEEEEEET--TTCCSC--EEEECCC-SSCCCEEEECGGGSCCC
T ss_pred EEEE--eCCEEEEEec---------------CCCeEEEEEC--CCCCce--EEEeCCC-CCCcEEEEecccccccc
Confidence 7776 6789999993 4668888876 556531 1111111 45888677788887743
No 93
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.44 E-value=0.00055 Score=53.44 Aligned_cols=61 Identities=10% Similarity=0.113 Sum_probs=44.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeE-E-EEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVL-T-GQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pkl-v-g~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.+..|++|+|++.| +++...+.|.+|++... .++ . .++. .. ..+.
T Consensus 173 ~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~--g~~~~~~~~~-~~-----------------------------~~~~ 219 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDTGDNATHRYCLNAR--GETEYQGVHF-TV-----------------------------EPGK 219 (296)
T ss_dssp SEEEEEECTTSCEE-EEETTTTEEEEEEECSS--SCEEEEEEEE-CC-----------------------------SSSC
T ss_pred CCccEEECCCCCEE-EEeCCCCeEEEEEECCC--CcCcCCCeEe-eC-----------------------------CCCC
Confidence 46789999999999 99999999999998732 233 1 1122 11 1234
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
|..+++++||+ |||++
T Consensus 220 p~~i~~d~~G~-l~v~~ 235 (296)
T 3e5z_A 220 TDGLRVDAGGL-IWASA 235 (296)
T ss_dssp CCSEEEBTTSC-EEEEE
T ss_pred CCeEEECCCCC-EEEEc
Confidence 99999999996 88887
No 94
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.43 E-value=0.00046 Score=57.82 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=54.1
Q ss_pred ceeEEEEecC---CCEEEEEeCCC-----CcEEEEeccCCCCCeEEE--EEEeCceeecCCceeEeeCCCCCCCCCCccc
Q 031020 4 LITDFLISLD---DRFLYFSNWLH-----GDIRQYNIEDPKNPVLTG--QIWVGGLFRKGSPVVAVTDDGQPYQSDVPEV 73 (167)
Q Consensus 4 l~tdI~IS~D---dRfLYVSnw~h-----g~I~qyDIsdp~~pklvg--~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~ 73 (167)
.+.+|++++| +++|||++... +.|.+|+.++. ++.. .+.. + + |... -
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~---~~~~~~~l~~-~-~-----------------p~~~-~ 132 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGE---RGVLDRVVLD-G-I-----------------PARP-H 132 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSS---CEEEEEEEEE-E-E-----------------CCCT-T
T ss_pred CceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCC---CcCceEEEEE-e-C-----------------CCCC-C
Confidence 4689999999 99999999864 78999997742 2211 1111 0 0 0000 0
Q ss_pred cCccCCCCCceEEEccCCCEEEEEeCCCcc-ccccccccccccCcEEEEEEee
Q 031020 74 QGHRLRGGPQMIQLSLDGKRLYVTNSLFSA-WDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 74 ~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~-wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
... .|..+++++|| +||||+.-... -..|. .-+..+.|+++|.|
T Consensus 133 ~~h----~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d---~~~~~g~I~ri~~d 177 (352)
T 2ism_A 133 GLH----SGGRIAFGPDG-MLYVTTGEVYERELAQD---LASLGGKILRLTPE 177 (352)
T ss_dssp CCC----CCCCEEECTTS-CEEEECCCTTCGGGGGC---TTCSSSEEEEECTT
T ss_pred CCc----CCceEEECCCC-CEEEEECCCCCCccccC---CCCCceEEEEEcCC
Confidence 011 38899999999 79999842111 00111 11234688888876
No 95
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.43 E-value=0.0016 Score=53.42 Aligned_cols=59 Identities=17% Similarity=0.096 Sum_probs=44.2
Q ss_pred eeEEEEecCCCEEEEEe-CCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 5 ITDFLISLDDRFLYFSN-WLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSn-w~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
+-.+++||||++|.++. -..+.|+.||+.+ .+...++...+ . -.
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~---~~~~~~~~~~~----------------------------~----V~ 180 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSD---LTEKFEIETRG----------------------------E----VK 180 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTT---TEEEEEEECSS----------------------------C----CC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCC---CcEEEEeCCCC----------------------------c----eE
Confidence 44689999999998754 3568899999764 55655554333 2 67
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|..+.
T Consensus 181 ~v~fspdg~~l~s~s 195 (365)
T 4h5i_A 181 DLHFSTDGKVVAYIT 195 (365)
T ss_dssp EEEECTTSSEEEEEC
T ss_pred EEEEccCCceEEecc
Confidence 899999999998775
No 96
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.42 E-value=0.0014 Score=50.09 Aligned_cols=65 Identities=22% Similarity=0.235 Sum_probs=47.8
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..++.+.+|+|+++|+++. .|.|++||+......+....+...+ ..+..
T Consensus 52 ~~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~-----------------------------~~~~v 100 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLN-----------------------------RDNYI 100 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSC-----------------------------TTSBE
T ss_pred CceEEEEEecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccC-----------------------------CCCcE
Confidence 4578899999999999887 8999999998654443333333211 11236
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||++|+++.
T Consensus 101 ~~~~~~~~~~~l~~~~ 116 (337)
T 1gxr_A 101 RSCKLLPDGCTLIVGG 116 (337)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEc
Confidence 7889999999999886
No 97
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.41 E-value=0.0005 Score=65.06 Aligned_cols=61 Identities=20% Similarity=0.356 Sum_probs=45.8
Q ss_pred eeEEEEecCCCEEEEEeCCC-CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 5 ITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~h-g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
+.+|+|.+..++||++.|+. +.|.+++.+-. ..+ .+..++ + .+|+
T Consensus 516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~---~lv~~~-l-----------------------------~~P~ 561 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIY---SLVTEN-I-----------------------------QWPN 561 (791)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEE---EEECSS-C-----------------------------SCEE
T ss_pred cceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceE---EEEeCC-C-----------------------------CCce
Confidence 67999999999999999987 88998886531 111 111111 0 1499
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
-++|++++++||||++
T Consensus 562 GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDS 577 (791)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred EEEEecCCCeEEEEeC
Confidence 9999999999999985
No 98
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.40 E-value=0.001 Score=62.99 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=69.0
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|+|+++++.||++.+..+.|.++++.. ...+.+ +..++. .|+
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG-~~~~~v--~~~~~~-------------------------------l~~ 604 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTI--LEDEKR-------------------------------LAH 604 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEE--EECTTT-------------------------------TSS
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCC-CceEEE--ecCCCc-------------------------------cCC
Confidence 4789999999999999999999999999853 222222 122221 156
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe--eecCceeEeccCCCCCCcceeeeecCC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM--AINPNFFVDFEAEPDGPALAHEMRYPG 158 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l--~l~~~F~vDf~~~p~gp~~~he~r~pg 158 (167)
-+.|+.++.+||||++ ++..|.++|. .+|.- ++.. -...|.|=.+.|..|.|-
T Consensus 605 P~glav~~~~lYwtD~---------------~~~~I~~~dk--~tG~~~~~l~~-----~l~~P~~i~v~h~~~Qp~ 659 (791)
T 3m0c_C 605 PFSLAVFEDKVFWTDI---------------INEAIFSANR--LTGSDVNLLAE-----NLLSPEDMVLFHNLTQPR 659 (791)
T ss_dssp EEEEEEETTEEEEEET---------------TTTEEEEEET--TTCCCCEEEEC-----SCSCCCCEEEESGGGSCC
T ss_pred CCEEEEeCCEEEEEEC---------------CCCEEEEEeC--CCCcceEEeec-----CCCCceeEeeeccccCCC
Confidence 6677778999999993 4678887876 55532 3322 234688877889888874
No 99
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.40 E-value=0.0007 Score=61.93 Aligned_cols=60 Identities=13% Similarity=0.277 Sum_probs=45.3
Q ss_pred eeEEEEecCCCEEEEEeCC-CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 5 ITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~-hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
+.+|++.|...+||++.|+ .+.|.+++.+- ...+.+. .+. . +|+
T Consensus 125 P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG-~~~~~l~---~~~---------------------------~----~P~ 169 (628)
T 4a0p_A 125 PRALALDPAEGFMYWTEWGGKPKIDRAAMDG-SERTTLV---PNV---------------------------G----RAN 169 (628)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEE---CSC---------------------------S----SEE
T ss_pred cccEEEccCCCeEEEeCCCCCCEEEEEeCCC-CceEEEE---CCC---------------------------C----Ccc
Confidence 6799999999999999998 67888888653 2222221 111 1 399
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
-+++++++++||||++
T Consensus 170 GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 170 GLTIDYAKRRLYWTDL 185 (628)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred eEEEccccCEEEEEEC
Confidence 9999999999999995
No 100
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.39 E-value=0.0011 Score=58.36 Aligned_cols=74 Identities=14% Similarity=0.294 Sum_probs=58.5
Q ss_pred EEEE--ecC-CC-EEEEEeCCCCcEEEEeccCCC----CCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccC
Q 031020 7 DFLI--SLD-DR-FLYFSNWLHGDIRQYNIEDPK----NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 78 (167)
Q Consensus 7 dI~I--S~D-dR-fLYVSnw~hg~I~qyDIsdp~----~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~ 78 (167)
.|.+ |++ ++ |+||++-. |.+.||++.+.. ..+++.++.+|+ .
T Consensus 132 Glcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgs----------------------------q- 181 (355)
T 3amr_A 132 GFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNS----------------------------Q- 181 (355)
T ss_dssp CEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSS----------------------------C-
T ss_pred EEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCC----------------------------C-
Confidence 3777 775 54 79999875 999999998753 446788888876 2
Q ss_pred CCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCC
Q 031020 79 RGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKG 129 (167)
Q Consensus 79 ~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G 129 (167)
|+.++..+...+|||+.+ + ..|.++|.+++++
T Consensus 182 ---~EgcvvDd~~g~Lyv~eE---------------d-~GIw~~da~p~~~ 213 (355)
T 3amr_A 182 ---TEGMAADDEYGRLYIAEE---------------D-EAIWKFSAEPDGG 213 (355)
T ss_dssp ---EEEEEEETTTTEEEEEET---------------T-TEEEEEECSTTSC
T ss_pred ---cceEEEcCCCCeEEEecc---------------c-ceEEEEeCCcCCC
Confidence 999999999999999983 3 4488999987763
No 101
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.39 E-value=0.0017 Score=51.59 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=24.2
Q ss_pred CceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
|+-+++|+||++|||+++.- .. .....+.++|++
T Consensus 190 p~gl~~spdg~~lyv~~~~~-----~~-----~~~~~i~~~~~~ 223 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPE-----QG-----HGSVEITAFAWR 223 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC-------------CCCEEEEEEEE
T ss_pred CcceEEcCCCCEEEEEecCC-----cC-----CCCCEEEEEEec
Confidence 89999999999999999510 00 013567777876
No 102
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.39 E-value=0.00025 Score=65.37 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=63.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|+|++++++||++.+..+.|.+|+... .+.+.+. ...+. .+.|.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG-~~~~~~~--~~~~~-----------------------------~~~P~ 588 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTIL--EDEKR-----------------------------LAHPF 588 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSS-SCCEEEC--CCSSS-----------------------------CSSCC
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCC-CceEEEE--ecCCc-----------------------------CCCce
Confidence 3568999999999999999999999999753 2222211 11110 01266
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceeeeecC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRYP 157 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he~r~p 157 (167)
-|++ |+.+||||+. .+..|.++|. .+|+.. ..+.+. ...|.|-.+.|+.|-|
T Consensus 589 glav--d~~~lywtd~---------------~~~~V~~~d~--~~G~~~--~~i~~~-~~~P~~i~v~~~~~qp 640 (699)
T 1n7d_A 589 SLAV--FEDKVFWTDI---------------INEAIFSANR--LTGSDV--NLLAEN-LLSPEDMVLFHQLTQP 640 (699)
T ss_dssp CCEE--ETTEEEEECS---------------TTTCEEEEET--TTEEEE--ECCCTT-CSSCCCCCBCSSSSSC
T ss_pred EeEE--ECCEEEEEeC---------------CCCeEEEEEc--cCCCce--EEeecC-CCCCcEEEEeCcccCC
Confidence 6665 6779999993 4567777775 566531 111111 2347777778887766
No 103
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.39 E-value=0.0019 Score=52.62 Aligned_cols=67 Identities=7% Similarity=0.076 Sum_probs=48.8
Q ss_pred ceeEEEEecCCCEEEEEeCC-----CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccC
Q 031020 4 LITDFLISLDDRFLYFSNWL-----HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 78 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~-----hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~ 78 (167)
.+..|.+++|+| |||+..+ .+.|.+||.. +.+++.++.+.... ...
T Consensus 68 ~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~---tg~~~~~~~~~~~~---------------------~~~---- 118 (343)
T 2qe8_A 68 TVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTL---NNQLSRVIYLPPPI---------------------TLS---- 118 (343)
T ss_dssp CEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETT---TTEEEEEEECCTTT---------------------SCT----
T ss_pred EeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECC---CCeEEEEEECChhh---------------------ccc----
Confidence 467899999986 9998876 5789999954 46666666553310 001
Q ss_pred CCCCceEEEccCCCEEEEEeC
Q 031020 79 RGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 79 ~g~P~~~~LS~DGkrLyVaNs 99 (167)
...|+.+++++++.++|||++
T Consensus 119 ~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 119 NSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp TCCCCEEEEETTTTEEEEEEC
T ss_pred ccccceEEEecCCCEEEEEcC
Confidence 123899999999999999994
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.36 E-value=0.00048 Score=57.27 Aligned_cols=66 Identities=11% Similarity=-0.001 Sum_probs=49.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCC-----------CeEEEEEEeCceeecCCceeEeeCCCCCCCCCCc
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKN-----------PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 71 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~-----------pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~ 71 (167)
.-++.|.+||+++++++|+..++.|++||+..... +++..... |
T Consensus 322 ~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------------- 376 (430)
T 2xyi_A 322 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--G----------------------- 376 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC--C-----------------------
T ss_pred CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC--C-----------------------
Confidence 45789999999999999999999999999986322 12221111 1
Q ss_pred cccCccCCCCCceEEEccCCCEEEEEeC
Q 031020 72 EVQGHRLRGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 72 ~~~g~~~~g~P~~~~LS~DGkrLyVaNs 99 (167)
..+.++.++++++|++++++++
T Consensus 377 ------h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 377 ------HTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp ------CSSCEEEEEECSSSTTEEEEEE
T ss_pred ------CCCCceEEEECCCCCCEEEEEE
Confidence 1234899999999998888884
No 105
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.35 E-value=0.0019 Score=54.42 Aligned_cols=63 Identities=14% Similarity=0.090 Sum_probs=43.8
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+.+|++++||| |||+.+. |.|+++| .+ .. +.+..+++ ...| .++|.
T Consensus 30 ~P~~ia~~pdG~-l~V~e~~-g~I~~~d-~~-G~-~~~~~~~v-------------------------~~~g---~~g~~ 76 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTERP-GRLVLIS-PS-GK-KLVASFDV-------------------------ANVG---EAGLL 76 (354)
T ss_dssp CEEEEEEEETTE-EEEEETT-TEEEEEC-SS-CE-EEEEECCC-------------------------CCST---TCSEE
T ss_pred CCeEEEEcCCCe-EEEEeCC-CEEEEEe-CC-Cc-eEeeccce-------------------------eecC---CCcee
Confidence 367899999997 9999987 8999886 22 11 22222211 0011 23599
Q ss_pred eEEEccC---CCEEEEEeC
Q 031020 84 MIQLSLD---GKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~D---GkrLyVaNs 99 (167)
.++++|| +++|||+++
T Consensus 77 gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 77 GLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEECTTTTTSCEEEEEEE
T ss_pred eEEeCCCCCcCCEEEEEEe
Confidence 9999999 999999985
No 106
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.34 E-value=0.0013 Score=48.86 Aligned_cols=62 Identities=18% Similarity=0.110 Sum_probs=42.4
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..+.+|||+++|++++...+.+..|++.-. ..+.. .+.. ..+.+..
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~-~~~~~-~~~~-------------------------------~~~~~~~ 177 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDID-SGVET-RLTH-------------------------------GEGRNDG 177 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEEETT-TCCEE-ECCC-------------------------------SSSCEEE
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEEECC-CCcce-Eccc-------------------------------CCCcccc
Confidence 5678999999999987777788888887531 11111 1110 1123788
Q ss_pred EEEccCCCEEEEEeC
Q 031020 85 IQLSLDGKRLYVTNS 99 (167)
Q Consensus 85 ~~LS~DGkrLyVaNs 99 (167)
+++|+||++|+++.+
T Consensus 178 ~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 178 PDYSPDGRWIYFNSS 192 (297)
T ss_dssp EEECTTSSEEEEEEC
T ss_pred ceECCCCCEEEEEec
Confidence 999999999998763
No 107
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.32 E-value=0.0011 Score=56.45 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=63.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|+|+++++.||++.+..+.|.++|++. .+.+.+. ...+. .+.
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~--~~~~~-------------------------------l~~ 292 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTIL--EDEKR-------------------------------LAH 292 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CCCEEEE--ECSST-------------------------------TSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeCCC-CccEEEE--eCCCC-------------------------------CCC
Confidence 4688999999999999999999999999763 3333221 11110 133
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe--eecCceeEeccCCCCCCcceeeeecC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM--AINPNFFVDFEAEPDGPALAHEMRYP 157 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l--~l~~~F~vDf~~~p~gp~~~he~r~p 157 (167)
-+.|+.++.+||+|+. .+..|.++|. .+|.. ++... + ..|.|-.+.|..|.|
T Consensus 293 P~gl~v~~~~lywtd~---------------~~~~V~~~~~--~~G~~~~~i~~~----~-~~p~~i~v~~~~~qp 346 (400)
T 3p5b_L 293 PFSLAVFEDKVFWTDI---------------INEAIFSANR--LTGSDVNLLAEN----L-LSPEDMVLFHNLTQP 346 (400)
T ss_dssp EEEEEEETTEEEEEES---------------SSCSEEEEES--SSCCCCEEEECS----C-SCEEEEEEESGGGSC
T ss_pred CEEEEEeCCEEEEecC---------------CCCeEEEEEc--CCCCceEEEecC----C-CCCceEEEEeeccCC
Confidence 3455558899999993 4566777775 55543 22211 1 235565566777766
No 108
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.30 E-value=0.001 Score=57.64 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=25.0
Q ss_pred ceeEEEEecCCCEEEEEeCCC-------CcEEEEecc
Q 031020 4 LITDFLISLDDRFLYFSNWLH-------GDIRQYNIE 33 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h-------g~I~qyDIs 33 (167)
.+..+.+|||||+|+++.|.+ .+|+++|+.
T Consensus 189 ~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 189 FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 456788999999999888665 579999987
No 109
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.26 E-value=0.002 Score=48.87 Aligned_cols=69 Identities=12% Similarity=0.279 Sum_probs=49.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|.++++|+ |||+++..+.|..||.+ .++. .+.+.. -...|.
T Consensus 231 ~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~----g~~~-~~~~~~-----------------------------~~~~~~ 275 (300)
T 2qc5_A 231 RPHAITAGKNSE-IWFTEWGANQIGRITND----NTIQ-EYQLQT-----------------------------ENAEPH 275 (300)
T ss_dssp CEEEEEECSTTC-EEEEETTTTEEEEECTT----SCEE-EEECCS-----------------------------TTCCCC
T ss_pred CceEEEECCCCC-EEEeccCCCeEEEECCC----CcEE-EEECCc-----------------------------cCCccc
Confidence 467899999997 99999999999999963 2222 222211 012399
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
.+.++++|+ ||+++ . + .++++|.+
T Consensus 276 ~i~~~~~g~-l~v~~---------------~-~-~i~~~~p~ 299 (300)
T 2qc5_A 276 GITFGKDGS-VWFAL---------------K-C-KIGKLNLN 299 (300)
T ss_dssp CEEECTTSC-EEEEC---------------S-S-EEEEEEEC
T ss_pred eeEeCCCCC-EEEEc---------------c-C-ceEEeCCC
Confidence 999999987 99988 3 5 77777763
No 110
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.25 E-value=0.0016 Score=54.82 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=53.9
Q ss_pred ceeEEEEecC---CCEEEEEeCC---C----CcEEEEeccCCCCCeEE------EEEEeCceeecCCceeEeeCCCCCCC
Q 031020 4 LITDFLISLD---DRFLYFSNWL---H----GDIRQYNIEDPKNPVLT------GQIWVGGLFRKGSPVVAVTDDGQPYQ 67 (167)
Q Consensus 4 l~tdI~IS~D---dRfLYVSnw~---h----g~I~qyDIsdp~~pklv------g~v~~GG~~~~~~~v~v~~~~~~~~~ 67 (167)
-+.+|+++|| +++|||++.. . +.|.+|+.++. ..++. ..++.++
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~-~~~~~~~~~l~~~~~~~~------------------- 133 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS-TFKLKEVKTLIDGIPGAY------------------- 133 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSS-SCCEEEEEEEEEEEECCS-------------------
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCC-CcCcCccEEEEEcCCCCC-------------------
Confidence 3678999999 9999999864 3 67888987642 11221 1122111
Q ss_pred CCCccccCccCCCCCceEEEccCCCEEEEEeCCCc-cccccccccccccCcEEEEEEeeC
Q 031020 68 SDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFS-AWDCQFYPELKEKGSHMLQIDVNS 126 (167)
Q Consensus 68 p~~~~~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s-~wD~Qfyp~~~~~g~~~~~~dvD~ 126 (167)
.| .|..|.+++||+ ||||..-.. ....|. ..+..+.|+++|.|.
T Consensus 134 --------~h---~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d---~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 134 --------IH---NGGRIRFGPDGM-LYITTGDAADPRLAQD---LSSLAGKILRVDEEG 178 (354)
T ss_dssp --------SC---CCCCEEECTTSC-EEEECCCTTCGGGGTC---TTCCSSEEEEECTTS
T ss_pred --------Cc---CCceEEECCCCc-EEEEECCCCCCccccC---CCCCCeEEEEEcCCC
Confidence 11 388999999995 999974211 111121 112346888888863
No 111
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.25 E-value=0.001 Score=55.78 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=55.2
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..|++.+|||+|||+.+ .|.|++++- + .++. + .+.+ .|+ ....| .++|.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~-~G~i~~~~~-~---g~~~-~-~~~~------------------~~~-v~~~g---~~g~~ 69 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLR-GGELRHWQA-G---KGLS-A-PLSG------------------VPD-VWAHG---QGGLL 69 (353)
T ss_dssp SEEEEEECSTTCCEEEEET-TTEEEEEET-T---TEEC-C-CCBS------------------CCC-CCCST---TCSEE
T ss_pred CcEEEEEcCCCCEEEEEeC-CceEEEEeC-C---Ccee-e-EecC------------------Ccc-cccCC---CCCce
Confidence 3578999999998999997 488888872 1 1111 0 0111 011 01111 34689
Q ss_pred eEEEccC---CCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 84 MIQLSLD---GKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 84 ~~~LS~D---GkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
.++++|| +++|||+++-.. .+. .....|++++.+...+.+.
T Consensus 70 gia~~pdf~~~g~lYv~~~~~~-~~g-------~~~~~v~r~~~~~~~~~~~ 113 (353)
T 2g8s_A 70 DVVLAPDFAQSRRIWLSYSEVG-DDG-------KAGTAVGYGRLSDDLSKVT 113 (353)
T ss_dssp EEEECTTHHHHCEEEEEEEEEC-SSS-------CEEEEEEEEEECTTSSBEE
T ss_pred eEEECCCCCCCCEEEEEEeCCC-CCC-------CceeEEEEEEECCCCCCCC
Confidence 9999998 999999985110 000 0134677787765555553
No 112
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.19 E-value=0.0053 Score=50.83 Aligned_cols=76 Identities=13% Similarity=0.165 Sum_probs=57.5
Q ss_pred CCCc---eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc
Q 031020 1 MPGL---ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 77 (167)
Q Consensus 1 ~p~l---~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~ 77 (167)
||++ ++.|.+++|++.||+.....+.|..+|.+ .++..+++++|. ..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~----g~v~~~i~l~g~--------------------------~D 71 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN----GDLIRTIPLDFV--------------------------KD 71 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT----CCEEEEEECSSC--------------------------SS
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC----CCEEEEEecCCC--------------------------CC
Confidence 3555 78999999999999866678899988864 668888998872 13
Q ss_pred CCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeC
Q 031020 78 LRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNS 126 (167)
Q Consensus 78 ~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~ 126 (167)
++-+++..+| +++|+.+ +...++.++++.
T Consensus 72 ----~EGIa~~~~g-~~~vs~E---------------~~~~l~~~~v~~ 100 (255)
T 3qqz_A 72 ----LETIEYIGDN-QFVISDE---------------RDYAIYVISLTP 100 (255)
T ss_dssp ----EEEEEECSTT-EEEEEET---------------TTTEEEEEEECT
T ss_pred ----hHHeEEeCCC-EEEEEEC---------------CCCcEEEEEcCC
Confidence 8888988877 4777773 345666777763
No 113
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.13 E-value=0.0023 Score=56.04 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=45.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCC-----cEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCcc
Q 031020 3 GLITDFLISLDDRFLYFSNWLHG-----DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHR 77 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg-----~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~ 77 (167)
.-+..+.+||||++|+.++...+ .|+.||+.. .+....+...+....+..+... .++. + +...++|.
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~-~~~~--~-~~~~~~~~- 108 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS---GQTRLLVDSKVVLPGTETLSDE-EKAR--R-ERQRIAAM- 108 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT---CCEEEEECGGGTC------------------------CC-
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC---CceeEccchhhcccccccccch-hhhh--h-hhhhhccc-
Confidence 34789999999999998887455 899999875 2332222211100000011110 0000 0 11111120
Q ss_pred CCCCCceEEEccCCCEEEEEe
Q 031020 78 LRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 78 ~~g~P~~~~LS~DGkrLyVaN 98 (167)
.+...+++||||++|+++.
T Consensus 109 --~~v~~~~~SpDg~~l~~~~ 127 (741)
T 2ecf_A 109 --TGIVDYQWSPDAQRLLFPL 127 (741)
T ss_dssp --EESCCCEECTTSSEEEEEE
T ss_pred --cCcceeEECCCCCEEEEEe
Confidence 1257889999999999887
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.12 E-value=0.0053 Score=50.36 Aligned_cols=72 Identities=10% Similarity=0.078 Sum_probs=51.8
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++.+.+|||+++|..++ ..+.|+.||+.+ .+++.++.- | ..+.-.
T Consensus 271 ~V~~~~~Spdg~~lasgs-~D~~V~iwd~~~---~~~~~~~~~-g-----------------------------H~~~V~ 316 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLAS-NDNSIALVKLKD---LSMSKIFKQ-A-----------------------------HSFAIT 316 (365)
T ss_dssp CEEEEEECTTSCEEEEEE-TTSCEEEEETTT---TEEEEEETT-S-----------------------------SSSCEE
T ss_pred CeEeEEECCCCCceEEEc-CCCEEEEEECCC---CcEEEEecC-c-----------------------------ccCCEE
Confidence 467899999999997766 478999999765 555544322 2 122367
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
.+++||||++|..+. ...++-.+|+.
T Consensus 317 ~v~fSpdg~~laS~S----------------~D~tvrvw~ip 342 (365)
T 4h5i_A 317 EVTISPDSTYVASVS----------------AANTIHIIKLP 342 (365)
T ss_dssp EEEECTTSCEEEEEE----------------TTSEEEEEECC
T ss_pred EEEECCCCCEEEEEe----------------CCCeEEEEEcC
Confidence 899999999987665 24466668884
No 115
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.12 E-value=0.00089 Score=58.71 Aligned_cols=60 Identities=23% Similarity=0.307 Sum_probs=42.3
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..+.+||||++|++++. +.|++||+.....|++. ++... .+.++.
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~-~l~~~-------------------------------~~~~~~ 156 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVR-QLTHG-------------------------------EGFATD 156 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCC-BCCCS-------------------------------SSCEEE
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEE-EcccC-------------------------------Cccccc
Confidence 578999999999999886 89999998753111111 11110 123788
Q ss_pred EEEccCCCEEEEEe
Q 031020 85 IQLSLDGKRLYVTN 98 (167)
Q Consensus 85 ~~LS~DGkrLyVaN 98 (167)
+++||||++|+.+.
T Consensus 157 ~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 157 AKLSPKGGFVSFIR 170 (741)
T ss_dssp EEECTTSSEEEEEE
T ss_pred ccCCCCCCEEEEEe
Confidence 99999999988765
No 116
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.09 E-value=0.0065 Score=50.94 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=43.4
Q ss_pred CceeEEEEecCCCEEEEEeCCC--CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLH--GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 80 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~h--g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g 80 (167)
..+..+.+||||++|+.+.+.. ..|+.||+.. .+.. ++. +. .+
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t---g~~~-~l~-~~------------------------------~~ 223 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN---GAVR-QVA-SF------------------------------PR 223 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEE-EEE-CC------------------------------SS
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC---CcEE-Eee-cC------------------------------CC
Confidence 3567899999999998877654 5899999874 2222 121 11 12
Q ss_pred CCceEEEccCCCEEEEEeC
Q 031020 81 GPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 81 ~P~~~~LS~DGkrLyVaNs 99 (167)
....+++||||++|+++.+
T Consensus 224 ~~~~~~~spdg~~la~~~~ 242 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALS 242 (415)
T ss_dssp CEEEEEECTTSSEEEEEEC
T ss_pred cccCEEEcCCCCEEEEEEe
Confidence 2678899999999997653
No 117
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.07 E-value=0.0012 Score=60.31 Aligned_cols=61 Identities=13% Similarity=0.275 Sum_probs=44.1
Q ss_pred eeEEEEecCCCEEEEEeCC-CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 5 ITDFLISLDDRFLYFSNWL-HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~-hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
+.+|++.|.+.+||+++|+ .+.|.+.+.+- ...+... ... . .+|+
T Consensus 129 P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~--~~~---------------------------~----~~P~ 174 (619)
T 3s94_A 129 PRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIII--NSE---------------------------I----YWPN 174 (619)
T ss_dssp CCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEE--CSS---------------------------C----SSEE
T ss_pred CceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEE--eCC---------------------------C----CCCc
Confidence 5689999999999999998 46787777542 1222111 000 1 1399
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
-+++++++++|||+++
T Consensus 175 Glald~~~~~LY~aD~ 190 (619)
T 3s94_A 175 GLTLDYEEQKLYWADA 190 (619)
T ss_dssp EEEEETTTTEEEEEET
T ss_pred EEEEEccCCEEEEEeC
Confidence 9999999999999995
No 118
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.06 E-value=0.0036 Score=52.49 Aligned_cols=62 Identities=19% Similarity=0.145 Sum_probs=42.0
Q ss_pred CCceeEEEEecCCCEEEEEeCCCC--cEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 2 PGLITDFLISLDDRFLYFSNWLHG--DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 2 p~l~tdI~IS~DdRfLYVSnw~hg--~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
++.+..+.+||||++|+++....+ .|+.||+.. .++ .++. +. .
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---~~~-~~l~-~~------------------------------~ 266 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---GQI-RQVT-DG------------------------------R 266 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCE-EECC-CC------------------------------S
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC---CCE-EeCc-CC------------------------------C
Confidence 345788999999999997765444 489999764 222 1111 11 1
Q ss_pred CCCceEEEccCCCEEEEEe
Q 031020 80 GGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaN 98 (167)
+....+++||||++|+++.
T Consensus 267 ~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp SCEEEEEECTTSSEEEEEE
T ss_pred CcccceEECCCCCEEEEEE
Confidence 1256789999999998876
No 119
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.01 E-value=0.0025 Score=55.01 Aligned_cols=61 Identities=8% Similarity=0.027 Sum_probs=40.2
Q ss_pred ceeEEEEecCCCEEEEEeCCCCc----EEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGD----IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~----I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
.+.+|++++|+++|||+++..+. |.+++-.. ..+....+. ...+
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g--~~~~~~~l~----------------------------~~~~-- 227 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRES--GFKVITELT----------------------------KGQN-- 227 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG--TSCSEEEEE----------------------------ECSS--
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC--ceeeeeeec----------------------------cCCC--
Confidence 47899999999999999996553 33333221 111011111 1123
Q ss_pred CCCceEEEccCCCEEEEEe
Q 031020 80 GGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaN 98 (167)
|+.+++++++.+|||++
T Consensus 228 --p~giavdp~~g~lyv~d 244 (430)
T 3tc9_A 228 --CNGAETHPINGELYFNS 244 (430)
T ss_dssp --CCCEEECTTTCCEEEEE
T ss_pred --ceEEEEeCCCCEEEEEE
Confidence 99999999888899998
No 120
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.00 E-value=0.0049 Score=47.60 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=28.5
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKN 37 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~ 37 (167)
..++.+.+|||++.+.+++-..|.|+.||+.....
T Consensus 260 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 260 STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 45788999999996667777789999999986443
No 121
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.011 Score=45.63 Aligned_cols=61 Identities=11% Similarity=0.041 Sum_probs=45.3
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.|.+|+|+++|+++. ..|.|++||+.+ .+....+. + ..+..
T Consensus 33 ~~v~~~~~s~~~~~l~~~~-~dg~i~vwd~~~---~~~~~~~~--~-----------------------------h~~~v 77 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCS-KDSSASVWYSLN---GERLGTLD--G-----------------------------HTGTI 77 (369)
T ss_dssp SCEEEEEECTTSCEEEEEE-SSSCEEEEETTT---CCEEEEEC--C-----------------------------CSSCE
T ss_pred ceEEEEEEcCCCCEEEEEe-CCCEEEEEeCCC---chhhhhhh--h-----------------------------cCCcE
Confidence 4588999999999998776 478999999875 34443332 1 11236
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||++|+++.
T Consensus 78 ~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 78 WSIDVDCFTKYCVTGS 93 (369)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEe
Confidence 7889999999998886
No 122
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.99 E-value=0.0054 Score=46.50 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=25.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEec
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNI 32 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDI 32 (167)
.+.+|.+++|++ ||+++...+.|.+||.
T Consensus 147 ~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 147 YPAFITLGSDNA-LWFTENQNNSIGRITN 174 (300)
T ss_dssp CEEEEEECTTSS-EEEEETTTTEEEEECT
T ss_pred CceeEEECCCCC-EEEEecCCCeEEEECC
Confidence 468899999998 9999998899999986
No 123
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.96 E-value=0.011 Score=44.99 Aligned_cols=60 Identities=17% Similarity=0.078 Sum_probs=46.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.|.+|+|+++|++++ ..+.|+.||+.. .+....+...+ ..
T Consensus 184 ~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~---~~~~~~~~~~~--------------------------------~v 227 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGG-LDNTVRSWDLRE---GRQLQQHDFTS--------------------------------QI 227 (337)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSEEEEEETTT---TEEEEEEECSS--------------------------------CE
T ss_pred CceEEEEECCCCCEEEEEe-cCCcEEEEECCC---CceEeeecCCC--------------------------------ce
Confidence 4578999999999998877 478999999875 44444433222 26
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++|+||++|+++.
T Consensus 228 ~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGM 243 (337)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEc
Confidence 7889999999999987
No 124
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.94 E-value=0.0021 Score=51.12 Aligned_cols=28 Identities=14% Similarity=0.227 Sum_probs=20.6
Q ss_pred EEEEecCCCEEEEEeCCCC--cEEEEeccC
Q 031020 7 DFLISLDDRFLYFSNWLHG--DIRQYNIED 34 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw~hg--~I~qyDIsd 34 (167)
...+|||||+|+++....+ .|+.+|+..
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~ 69 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNT 69 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTT
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCC
Confidence 3679999998887776455 477777653
No 125
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.93 E-value=0.0054 Score=51.41 Aligned_cols=93 Identities=12% Similarity=0.147 Sum_probs=54.0
Q ss_pred eeEEEEecC---CCEEEEEeCC-------CCcEEEEeccCCCCCeEEE--EEEeCceeecCCceeEeeCCCCCCCCCCcc
Q 031020 5 ITDFLISLD---DRFLYFSNWL-------HGDIRQYNIEDPKNPVLTG--QIWVGGLFRKGSPVVAVTDDGQPYQSDVPE 72 (167)
Q Consensus 5 ~tdI~IS~D---dRfLYVSnw~-------hg~I~qyDIsdp~~pklvg--~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~ 72 (167)
+.+|+++|| +++|||+... ...|.+|+.++ ...++.. .+..+- |..
T Consensus 68 ~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~-~~~~~~~~~~i~~~~-------------------p~~-- 125 (353)
T 2g8s_A 68 LLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSD-DLSKVTDFRTVFRQM-------------------PKL-- 125 (353)
T ss_dssp EEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECT-TSSBEEEEEEEEECS-------------------SCC--
T ss_pred ceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECC-CCCCCCceEEEEEEC-------------------CCC--
Confidence 468999998 9999999765 45788888764 2233321 111111 100
Q ss_pred ccCccCCCCCceEEEccCCCEEEEEeCCCccc-cccccccccccCcEEEEEEeeC
Q 031020 73 VQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAW-DCQFYPELKEKGSHMLQIDVNS 126 (167)
Q Consensus 73 ~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~w-D~Qfyp~~~~~g~~~~~~dvD~ 126 (167)
..+.| .|..|.+++|| +||||+.-...- ..|. +-...+.|+++|.|.
T Consensus 126 ~~~~h---~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~---~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 126 STGNH---FGGRLVFDGKG-YLFIALGENNQRPTAQD---LDKLQGKLVRLTDQG 173 (353)
T ss_dssp BSSSC---CCCCEEECSSS-EEEEEECCTTCGGGGGC---TTSCTTEEEEEETTS
T ss_pred CCCcc---cCccEEECCCC-cEEEEECCCCCCCccCC---CCCCCeEEEEECCCC
Confidence 00112 37889999999 899997311110 0111 112346788888863
No 126
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.93 E-value=0.0015 Score=61.12 Aligned_cols=85 Identities=12% Similarity=0.109 Sum_probs=57.0
Q ss_pred CceeEEEEecCCCEEEE------------EeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCC
Q 031020 3 GLITDFLISLDDRFLYF------------SNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDV 70 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYV------------Snw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~ 70 (167)
+-+.++.+|+|++++|+ +.-....|+.||+.. .++. .+. .+
T Consensus 557 ~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~---~~~~-~l~-~~---------------------- 609 (1045)
T 1k32_A 557 GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT---RKVT-EVK-NN---------------------- 609 (1045)
T ss_dssp BCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTT---CCEE-EEE-EE----------------------
T ss_pred CChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCC---CcEE-Eee-cC----------------------
Confidence 34678999999988886 222345788888765 2221 111 11
Q ss_pred ccccCccCCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCC---CCeee-cCceeEecc
Q 031020 71 PEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEK---GGMAI-NPNFFVDFE 142 (167)
Q Consensus 71 ~~~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~---G~l~l-~~~F~vDf~ 142 (167)
+..+.+|+||++|++++. + .+..+|+++.+ +.+.+ +-++.+|..
T Consensus 610 -----------v~~~~~S~DG~~l~~~~~----------------~-~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 657 (1045)
T 1k32_A 610 -----------LTDLRLSADRKTVMVRKD----------------D-GKIYTFPLEKPEDERTVETDKRPLVSSIH 657 (1045)
T ss_dssp -----------EEEEEECTTSCEEEEEET----------------T-SCEEEEESSCTTSCEECCCCSSCEEEEHH
T ss_pred -----------cceEEECCCCCEEEEEcC----------------C-cEEEEeCccCcccCCccccceeEEEEChh
Confidence 667899999999999982 2 56778885543 34667 567777663
No 127
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.91 E-value=0.0072 Score=46.55 Aligned_cols=61 Identities=8% Similarity=-0.021 Sum_probs=46.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++.+.+|||+++|+.+. ..|.|+.||+.. .+++..+.. ..+..+
T Consensus 275 ~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~---~~~~~~~~~-------------------------------~~~~v~ 319 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVG-SDGRFSFWDKDA---RTKLKTSEQ-------------------------------LDQPIS 319 (368)
T ss_dssp CEEEEEECTTTCCEEEEE-TTSCEEEEETTT---TEEEEECCC-------------------------------CSSCEE
T ss_pred ceEEEEEecCCCEEEEEc-cCCeEEEEECCC---CcEEEEecC-------------------------------CCCCce
Confidence 488999999999997776 478999999874 444433321 122378
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++|+||++|.++.+
T Consensus 320 ~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEEECTTSSCEEEEEC
T ss_pred EEEECCCCCeEEEEec
Confidence 8999999999999975
No 128
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.91 E-value=0.0089 Score=45.27 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=49.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..|.+++|++ ||++++..+.|.+||. + .++. .+.+.+ -...|.
T Consensus 184 ~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~---g~~~-~~~~~~-----------------------------~~~~~~ 228 (299)
T 2z2n_A 184 GPVGITKGNDDA-LWFVEIIGNKIGRITT-S---GEIT-EFKIPT-----------------------------PNARPH 228 (299)
T ss_dssp CEEEEEECTTSS-EEEEETTTTEEEEECT-T---CCEE-EEECSS-----------------------------TTCCEE
T ss_pred cceeEEECCCCC-EEEEccCCceEEEECC-C---CcEE-EEECCC-----------------------------CCCCce
Confidence 367899999987 8999999999999996 2 2222 122111 012399
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEe
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDV 124 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dv 124 (167)
.++++++|+ |||++. .+..+.++|.
T Consensus 229 ~i~~~~~g~-l~v~~~---------------~~~~i~~~d~ 253 (299)
T 2z2n_A 229 AITAGAGID-LWFTEW---------------GANKIGRLTS 253 (299)
T ss_dssp EEEECSTTC-EEEEET---------------TTTEEEEEET
T ss_pred eEEECCCCC-EEEecc---------------CCceEEEECC
Confidence 999999987 999983 3556777776
No 129
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.015 Score=44.73 Aligned_cols=61 Identities=8% Similarity=0.028 Sum_probs=47.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.|.+|+|+++|+.++. .+.|+.||+.. .+....+...+ ..
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~~~~~--------------------------------~v 118 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSA-DYSIKLWDVSN---GQCVATWKSPV--------------------------------PV 118 (369)
T ss_dssp SCEEEEEECTTSSEEEEEET-TTEEEEEETTT---CCEEEEEECSS--------------------------------CE
T ss_pred CcEEEEEEcCCCCEEEEEeC-CCeEEEEECCC---CcEEEEeecCC--------------------------------Ce
Confidence 35789999999999977764 78999999875 44554444222 27
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
..++++++|++|+++..
T Consensus 119 ~~~~~~~~~~~l~~~~~ 135 (369)
T 3zwl_B 119 KRVEFSPCGNYFLAILD 135 (369)
T ss_dssp EEEEECTTSSEEEEEEC
T ss_pred EEEEEccCCCEEEEecC
Confidence 88999999999999873
No 130
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.88 E-value=0.0028 Score=54.49 Aligned_cols=75 Identities=11% Similarity=0.108 Sum_probs=46.8
Q ss_pred eEEEEecCCCEEEEEeCCC---CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 6 TDFLISLDDRFLYFSNWLH---GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~h---g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.++.+|||||+|+.+.+.. ..|+.+|+.. ...+ ++ ++. .+..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~-g~~~---~l-~~~------------------------------~~~~ 197 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS-GGLR---VF-DSG------------------------------EGSF 197 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTT-CCCE---EE-CCS------------------------------SCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC-CCce---Ee-ecC------------------------------CCcc
Confidence 5788999999998665432 4588888664 2221 22 111 1125
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccC-cEEEEEEeeCCCCCee
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKG-SHMLQIDVNSEKGGMA 132 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g-~~~~~~dvD~~~G~l~ 132 (167)
...++||||++|+.+. ++| .++.++|+ ++|.++
T Consensus 198 ~~~~~SpDG~~l~~~~---------------~~~~~~i~~~d~--~~~~~~ 231 (582)
T 3o4h_A 198 SSASISPGMKVTAGLE---------------TAREARLVTVDP--RDGSVE 231 (582)
T ss_dssp EEEEECTTSCEEEEEE---------------CSSCEEEEEECT--TTCCEE
T ss_pred ccceECCCCCEEEEcc---------------CCCeeEEEEEcC--CCCcEE
Confidence 7789999999999444 223 36766776 566654
No 131
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.84 E-value=0.0056 Score=49.64 Aligned_cols=63 Identities=8% Similarity=0.146 Sum_probs=45.3
Q ss_pred eeEEEEecCCCEEEEEe--CCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 5 ITDFLISLDDRFLYFSN--WLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSn--w~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
++.+.+|+|+++|+++. -..+.|+.||+.....+.....+ .. .++.
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~~------------------------------~~~v 270 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL--DT------------------------------SSGV 270 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC--CC------------------------------CSSC
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec--cC------------------------------CCce
Confidence 67899999999888764 46789999998864433222211 11 1237
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
..+++|+||++||++.+
T Consensus 271 ~~~~~s~~~~~l~~~g~ 287 (402)
T 2aq5_A 271 LLPFFDPDTNIVYLCGK 287 (402)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred eEEEEcCCCCEEEEEEc
Confidence 78999999999999873
No 132
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.83 E-value=0.037 Score=42.48 Aligned_cols=31 Identities=13% Similarity=0.292 Sum_probs=25.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
+-++.|.+|||+++|+.++ ..+.|+.||+..
T Consensus 216 ~~v~~~~~s~~~~~l~s~s-~Dg~i~iwd~~~ 246 (340)
T 4aow_A 216 GYLNTVTVSPDGSLCASGG-KDGQAMLWDLNE 246 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTCEEEEEETTT
T ss_pred CcEEEEEECCCCCEEEEEe-CCCeEEEEEecc
Confidence 3578899999999997766 578999999875
No 133
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.80 E-value=0.013 Score=53.62 Aligned_cols=96 Identities=16% Similarity=0.146 Sum_probs=62.0
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+.+|+|+++++.||++....+.|.++|++. ...++. .++ + .+ |-
T Consensus 167 ~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG-~~~~v~----~~~-l-------------------------~~----P~ 211 (628)
T 4a0p_A 167 RANGLTIDYAKRRLYWTDLDTNLIESSNMLG-LNREVI----ADD-L-------------------------PH----PF 211 (628)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEE----EEC-C-------------------------SC----EE
T ss_pred CcceEEEccccCEEEEEECCCCEEEEEcCCC-CceEEe----ecc-C-------------------------CC----ce
Confidence 4678999999999999999999999999864 222322 111 0 12 65
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe--eecCceeEeccCCCCCCcceeeeecCC
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM--AINPNFFVDFEAEPDGPALAHEMRYPG 158 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l--~l~~~F~vDf~~~p~gp~~~he~r~pg 158 (167)
-+++ ++.+||||+. .+..|.++|. .+|+- .+.... ..|.|-..-|+.|-||
T Consensus 212 glav--~~~~ly~tD~---------------~~~~I~~~dk--~tg~~~~~l~~~~-----~~p~~i~v~~~~~q~~ 264 (628)
T 4a0p_A 212 GLTQ--YQDYIYWTDW---------------SRRSIERANK--TSGQNRTIIQGHL-----DYVMDILVFHSSRQSG 264 (628)
T ss_dssp EEEE--ETTEEEEEET---------------TTTEEEEEET--TTCCSCEEEECSC-----CSCCEEEEECGGGSCC
T ss_pred EEEE--ECCEEEEecC---------------CCCEEEEEEC--CCCCceEEEecCC-----CCcceeeeeeeccccc
Confidence 5555 6789999993 4667877776 55542 222211 2355545667766665
No 134
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.78 E-value=0.0088 Score=46.89 Aligned_cols=30 Identities=23% Similarity=0.113 Sum_probs=21.2
Q ss_pred eeEEEEecCCCEEEEEeCCC--C--cEEEEeccC
Q 031020 5 ITDFLISLDDRFLYFSNWLH--G--DIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~h--g--~I~qyDIsd 34 (167)
+..+.+||||++|++..... + .|+++|+..
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~ 94 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLET 94 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCC
Confidence 46789999999887766533 3 477777653
No 135
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.78 E-value=0.026 Score=43.94 Aligned_cols=64 Identities=8% Similarity=0.120 Sum_probs=46.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.|.+|+|+++|+.++ ..+.|+.||+.. .++......-+ ..+..
T Consensus 53 ~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~---~~~~~~~~~~~-----------------------------~~~~v 99 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKG---RTWKPTLVILR-----------------------------INRAA 99 (372)
T ss_dssp SCEEEEEEETTTTEEEEEE-TTSCEEEEEEET---TEEEEEEECCC-----------------------------CSSCE
T ss_pred CcccEEEEeCCCCEEEEEc-CCCeEEEEECCC---CeeeeeEEeec-----------------------------CCCce
Confidence 4578999999999998777 478999999864 33332222211 12237
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
..+++++||++|+++.+
T Consensus 100 ~~~~~~~~~~~l~~~~~ 116 (372)
T 1k8k_C 100 RCVRWAPNEKKFAVGSG 116 (372)
T ss_dssp EEEEECTTSSEEEEEET
T ss_pred eEEEECCCCCEEEEEeC
Confidence 88999999999999873
No 136
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.77 E-value=0.0092 Score=45.17 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=25.8
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEec
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNI 32 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDI 32 (167)
..+.+|.+++||+ |||+++..+.|..||.
T Consensus 225 ~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 225 ARPHAITAGAGID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp CCEEEEEECSTTC-EEEEETTTTEEEEEET
T ss_pred CCceeEEECCCCC-EEEeccCCceEEEECC
Confidence 3578899999997 9999999999999996
No 137
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.75 E-value=0.022 Score=46.37 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=46.8
Q ss_pred CceeEEEEecCCCEEEEEeC-CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNW-LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw-~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.-++.+.+|+|+++|++++. ..|.|++||+.. .++.....+.+ ..+.
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~---~~~~~~~~~~~-----------------------------h~~~ 351 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS---SGLTKQVDIPA-----------------------------HDTR 351 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEET---TEEEEEEEEEC-----------------------------CSSC
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCC---ccceeEEEecC-----------------------------CCCC
Confidence 45789999999999999853 689999999875 33332222212 1123
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
...+++|+||++|+++.
T Consensus 352 v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 352 VLYSALSPDGRILSTAA 368 (401)
T ss_dssp CCEEEECTTSSEEEEEC
T ss_pred EEEEEECCCCCEEEEEe
Confidence 77899999999999887
No 138
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.72 E-value=0.021 Score=46.34 Aligned_cols=63 Identities=24% Similarity=0.272 Sum_probs=46.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCc-EEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGD-IRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~-I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.-++.|.+|||+++|..+. ..+. |+.||+.. .+.+.++..|. ..+.
T Consensus 196 ~~v~~~~~s~~g~~l~s~s-~d~~~v~iwd~~~---~~~~~~~~~g~-----------------------------h~~~ 242 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCS-QDGTIIRVFKTED---GVLVREFRRGL-----------------------------DRAD 242 (355)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTCSEEEEEETTT---CCEEEEEECTT-----------------------------CCSC
T ss_pred CceEEEEECCCCCEEEEEe-CCCCEEEEEECCC---CcEEEEEEcCC-----------------------------CCCc
Confidence 3478999999999996665 4677 99999875 45555544331 1123
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
-..+++||||++|..+.
T Consensus 243 v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 67899999999998887
No 139
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.70 E-value=0.0066 Score=55.07 Aligned_cols=72 Identities=8% Similarity=0.112 Sum_probs=50.8
Q ss_pred eeEEEE-------ecCCCEEEEEeCCCCc------EEEEeccCCCCCeEE-----EEEEeCceeecCCceeEeeCCCCCC
Q 031020 5 ITDFLI-------SLDDRFLYFSNWLHGD------IRQYNIEDPKNPVLT-----GQIWVGGLFRKGSPVVAVTDDGQPY 66 (167)
Q Consensus 5 ~tdI~I-------S~DdRfLYVSnw~hg~------I~qyDIsdp~~pklv-----g~v~~GG~~~~~~~v~v~~~~~~~~ 66 (167)
+.+|.+ ++|+++|||++|..+. |..++... +.++. ..+.
T Consensus 188 p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~--~G~~~~~~~~~~v~--------------------- 244 (496)
T 3kya_A 188 IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA--DGTFDDRSDIQLIA--------------------- 244 (496)
T ss_dssp EEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT--TSCCSTTSCEEEEE---------------------
T ss_pred CcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC--CCceeecccceeec---------------------
Confidence 788999 9999999999998643 44444221 11211 1121
Q ss_pred CCCCccccCccCCCCCceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 67 QSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 67 ~p~~~~~~g~~~~g~P~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
.+.+ |..+++++++++|||++. ..+.++++|.+
T Consensus 245 -------~~~~----p~giavdp~~g~LYvtd~---------------~~g~V~r~d~~ 277 (496)
T 3kya_A 245 -------AYKQ----CNGATIHPINGELYFNSY---------------EKGQVFRLDLV 277 (496)
T ss_dssp -------EESC----CCCEEECTTTCCEEEEET---------------TTTEEEEECHH
T ss_pred -------cCCC----ceEEEEcCCCCeEEEEEC---------------CCCEEEEEecc
Confidence 1234 999999999999999993 46688999987
No 140
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.70 E-value=0.037 Score=48.48 Aligned_cols=120 Identities=10% Similarity=0.104 Sum_probs=64.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..|++.+||| |||+.+..+.|++++-.+ ...+.+..+. . ... . -.-.+++-
T Consensus 28 ~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~-g~~~~~~~~~--~---------------------~~~-~-~~g~~Gll 80 (454)
T 1cru_A 28 KPHALLWGPDNQ-IWLTERATGKILRVNPES-GSVKTVFQVP--E---------------------IVN-D-ADGQNGLL 80 (454)
T ss_dssp SEEEEEECTTSC-EEEEETTTCEEEEECTTT-CCEEEEEECT--T---------------------CCC-C-TTSSCSEE
T ss_pred CceEEEEcCCCc-EEEEEcCCCEEEEEECCC-CcEeEEecCC--c---------------------ccc-c-cCCCCcee
Confidence 356899999998 888888767788776432 1111111111 1 000 0 01135688
Q ss_pred eEEEccC---CCEEEEEeCCCcc-ccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceeeeec
Q 031020 84 MIQLSLD---GKRLYVTNSLFSA-WDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHEMRY 156 (167)
Q Consensus 84 ~~~LS~D---GkrLyVaNsl~s~-wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he~r~ 156 (167)
.++++|| +++|||+++-..+ ..... ......|++++.+..++.+.--+..+-.+..... -.+|.|.|
T Consensus 81 gia~~Pdf~~~g~lYv~~s~~~~~~~~~~----~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~--H~~~~l~f 151 (454)
T 1cru_A 81 GFAFHPDFKNNPYIYISGTFKNPKSTDKE----LPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKD--HQSGRLVI 151 (454)
T ss_dssp EEEECTTTTTSCEEEEEEEEECTTC--CC----SCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSS--CCEEEEEE
T ss_pred EEEECCCcCcCCEEEEEEeccccCCCccc----cccccEEEEEEECCCCCCcCCcEEEEEcCCCCCC--CCCCeEeE
Confidence 9999999 9999999951000 00000 0013578888887666655322223323432111 13566666
No 141
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.69 E-value=0.024 Score=43.56 Aligned_cols=66 Identities=14% Similarity=0.062 Sum_probs=43.7
Q ss_pred CceeEEEEecCC-CEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDD-RFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~Dd-RfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
+.++.|++|||+ ++| +|+-.++.|++||+.........-.-.+-| ..+.
T Consensus 39 ~~V~~v~~sp~~~~~l-~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-----------------------------h~~~ 88 (340)
T 4aow_A 39 GWVTQIATTPQFPDMI-LSASRDKTIIMWKLTRDETNYGIPQRALRG-----------------------------HSHF 88 (340)
T ss_dssp SCEEEEEECTTCTTEE-EEEETTSCEEEEEECCSSSCSEEEEEEECC-----------------------------CSSC
T ss_pred CCEEEEEEeCCCCCEE-EEEcCCCeEEEEECCCCCcccceeeEEEeC-----------------------------CCCC
Confidence 458899999985 555 566568999999998643222111111111 1223
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
...+++|+||++|+.+.
T Consensus 89 V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 89 VSDVVISSDGQFALSGS 105 (340)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred EEEEEECCCCCEEEEEc
Confidence 67889999999998876
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.68 E-value=0.0062 Score=53.19 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=39.4
Q ss_pred eEEEEec--CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 6 TDFLISL--DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 6 tdI~IS~--DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
..+.+|+ ||++||++++. +.++.|+++. ..+...++. +|. ++.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~--~~~~~~~l~-~~~-------------------------------~~v 357 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRD-GWNHLYLYDT--TGRLIRQVT-KGE-------------------------------WEV 357 (706)
T ss_dssp SCCEECTTCSSEEEEEECTT-SSCEEEEEET--TSCEEEECC-CSS-------------------------------SCE
T ss_pred CCceeecCCCCEEEEEEccC-CccEEEEEEC--CCCEEEecC-CCC-------------------------------eEE
Confidence 5689999 99999999864 6677777652 122233332 221 122
Q ss_pred --eEEEccCCCEEEEEeC
Q 031020 84 --MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 --~~~LS~DGkrLyVaNs 99 (167)
.+++|+||++||++++
T Consensus 358 ~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EEEEEECTTSSEEEEEES
T ss_pred EeeeEEcCCCCEEEEEec
Confidence 2789999999999985
No 143
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.67 E-value=0.017 Score=45.54 Aligned_cols=61 Identities=11% Similarity=0.094 Sum_probs=44.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+..|.+|||+++|..+. ..|.|+.||+.. .+.+..+.... ..-
T Consensus 14 ~~V~~~~fsp~~~~l~s~~-~dg~v~lWd~~~---~~~~~~~~~~~-------------------------------~~v 58 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTL-YSGRVELWNYET---QVEVRSIQVTE-------------------------------TPV 58 (304)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEETTT---TEEEEEEECCS-------------------------------SCE
T ss_pred CceEEEEECCCCCEEEEEc-CCCcEEEEECCC---CceeEEeeccC-------------------------------CcE
Confidence 3578999999999998777 478999999864 44444443211 114
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
+.+++++||++|+++.
T Consensus 59 ~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGS 74 (304)
T ss_dssp EEEEEEGGGTEEEEEE
T ss_pred EEEEEeCCCCEEEEEC
Confidence 6778999999998887
No 144
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.65 E-value=0.025 Score=45.37 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=44.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..+.+|||+++|..++ ..+.|+.||+.. .+++.++. + ..+..+
T Consensus 166 ~v~~~~~spdg~~lasg~-~dg~i~iwd~~~---~~~~~~~~--~-----------------------------h~~~v~ 210 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGA-IDGIINIFDIAT---GKLLHTLE--G-----------------------------HAMPIR 210 (321)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEETTT---TEEEEEEC--C-----------------------------CSSCCC
T ss_pred eEEEEEECCCCCEEEEEc-CCCeEEEEECCC---CcEEEEEc--c-----------------------------cCCcee
Confidence 478899999999998776 478999999864 45544332 1 012267
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|+.+.
T Consensus 211 ~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 211 SLTFSPDSQLLVTAS 225 (321)
T ss_dssp EEEECTTSCEEEEEC
T ss_pred EEEEcCCCCEEEEEc
Confidence 899999999998876
No 145
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.65 E-value=0.0064 Score=50.44 Aligned_cols=66 Identities=9% Similarity=0.037 Sum_probs=48.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..+.+|.+|+++..+++++-..|.|++||+......+.+..+... .+.+
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-------------------------------~~~v 280 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH-------------------------------TAEV 280 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC-------------------------------SSCE
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC-------------------------------CCCe
Confidence 357899999988888888888999999999864433444333211 1238
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
+.++++++|++++++.+
T Consensus 281 ~~i~~~p~~~~~l~tg~ 297 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGS 297 (430)
T ss_dssp EEEEECSSCTTEEEEEE
T ss_pred EEEEeCCCCCCEEEEEe
Confidence 89999999998887774
No 146
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.61 E-value=0.0098 Score=54.19 Aligned_cols=62 Identities=19% Similarity=0.327 Sum_probs=45.2
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+.+|.++++++.||+|.+..+.|.+++++... ....+...|. ..|+.
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~---~~~~v~~~~~------------------------------~~P~G 88 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE---SVQNVVVSGL------------------------------LSPDG 88 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC------------------------------SCEEE
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCC---ceEEEEeCCC------------------------------CCcCe
Confidence 67889999999999999999999999876321 1111222220 13999
Q ss_pred EEEccCCCEEEEEeC
Q 031020 85 IQLSLDGKRLYVTNS 99 (167)
Q Consensus 85 ~~LS~DGkrLyVaNs 99 (167)
+++++.+++||+|++
T Consensus 89 lAvD~~~~~ly~~d~ 103 (619)
T 3s94_A 89 LACDWLGEKLYWTDS 103 (619)
T ss_dssp EEEETTTTEEEEEET
T ss_pred EEEEecCCEEEEEeC
Confidence 999999999999995
No 147
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.60 E-value=0.0048 Score=51.80 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=42.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++.|++|||||+|..+. ..+.|++||.+ .++..++. | ..+.-.
T Consensus 18 ~V~~~a~spdg~~las~~-~d~~v~iWd~~----~~~~~~l~--g-----------------------------h~~~V~ 61 (577)
T 2ymu_A 18 SVRGVAFSPDGQTIASAS-DDKTVKLWNRN----GQLLQTLT--G-----------------------------HSSSVW 61 (577)
T ss_dssp CEEEEEECTTSSCEEEEE-TTSEEEEECTT----SCEEEEEE--C-----------------------------CSSCEE
T ss_pred cEEEEEECCCCCEEEEEe-CCCEEEEEECC----CCEEEEEe--C-----------------------------CCCCEE
Confidence 478999999999996554 57899999953 34443332 2 112356
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|..+.
T Consensus 62 ~l~fspdg~~las~~ 76 (577)
T 2ymu_A 62 GVAFSPDGQTIASAS 76 (577)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 789999999998875
No 148
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.57 E-value=0.0084 Score=47.62 Aligned_cols=31 Identities=10% Similarity=-0.004 Sum_probs=21.4
Q ss_pred CceeEEEEec-CCCEEE-EEeCC----CCcEEEEecc
Q 031020 3 GLITDFLISL-DDRFLY-FSNWL----HGDIRQYNIE 33 (167)
Q Consensus 3 ~l~tdI~IS~-DdRfLY-VSnw~----hg~I~qyDIs 33 (167)
..+.++.+|| ||+.|+ +++.. ...|+.+|+.
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 3467899999 999875 45432 3477777764
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.53 E-value=0.0059 Score=53.19 Aligned_cols=62 Identities=18% Similarity=0.124 Sum_probs=41.3
Q ss_pred eeEEEEecCCCEEEEEeCC--------CCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCc
Q 031020 5 ITDFLISLDDRFLYFSNWL--------HGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 76 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~--------hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~ 76 (167)
+..+.+|||||+|..+... .+.|+.||+... ..+ ++..+.
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~---~l~~~~---------------------------- 110 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG-DPQ---SLDPPE---------------------------- 110 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC-CCE---ECCCTT----------------------------
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC-ceE---eccCCc----------------------------
Confidence 6789999999998877643 278889998752 221 222111
Q ss_pred cCCCCCceEEEccCCCEEEEEe
Q 031020 77 RLRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 77 ~~~g~P~~~~LS~DGkrLyVaN 98 (167)
......+.+++||||++|..+.
T Consensus 111 ~~~~~~~~~~~SPdG~~la~~~ 132 (723)
T 1xfd_A 111 VSNAKLQYAGWGPKGQQLIFIF 132 (723)
T ss_dssp CCSCCCSBCCBCSSTTCEEEEE
T ss_pred cccccccccEECCCCCEEEEEE
Confidence 0112267889999999887766
No 150
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.50 E-value=0.028 Score=44.47 Aligned_cols=39 Identities=8% Similarity=0.144 Sum_probs=31.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEE
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIW 45 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~ 45 (167)
..++.+.+|+|+++|+.++ ..|.|++||+.. .+.+..+.
T Consensus 292 ~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~---~~~~~~~~ 330 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAG-WDGKLRFWDVKT---KERITTLN 330 (397)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEETTT---TEEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEe-CCCeEEEEEcCC---CceeEEEe
Confidence 3578999999999998777 578999999875 56666655
No 151
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.50 E-value=0.0056 Score=53.03 Aligned_cols=31 Identities=3% Similarity=-0.089 Sum_probs=23.7
Q ss_pred ceeEEEEecCCCEEEEEeCCC---------CcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLH---------GDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h---------g~I~qyDIsd 34 (167)
-..++.+||||++|++++..+ ..|+.||+..
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 357899999999998887543 4677777654
No 152
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.50 E-value=0.031 Score=44.69 Aligned_cols=61 Identities=11% Similarity=0.048 Sum_probs=44.2
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+-+..|.+|+|+++|..+. ..+.|+.||+.. .+....+.... +..
T Consensus 56 ~~v~~~~~s~d~~~l~s~s-~Dg~v~iWd~~~---~~~~~~~~~~~-------------------------------~~v 100 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSAS-QDGKLIIWDSYT---TNKVHAIPLRS-------------------------------SWV 100 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTTEEEEEETTT---CCEEEEEECSS-------------------------------SCE
T ss_pred CceEEEEECCCCCEEEEEe-CCCcEEEEECCC---CCcceEeecCC-------------------------------ccE
Confidence 3578999999999997665 578999999764 33444443222 125
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++||||++|.++.
T Consensus 101 ~~~~~s~~~~~l~s~~ 116 (340)
T 1got_B 101 MTCAYAPSGNYVACGG 116 (340)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 6788999999988876
No 153
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.47 E-value=0.027 Score=45.80 Aligned_cols=61 Identities=11% Similarity=0.049 Sum_probs=48.0
Q ss_pred CceeEEEEecCCCEEEEEeC--CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCC
Q 031020 3 GLITDFLISLDDRFLYFSNW--LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 80 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw--~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g 80 (167)
..++.|.+||+++.|++++- ..+.|+.||+.. .+....+..++
T Consensus 260 ~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~---~~~~~~~~~~~-------------------------------- 304 (401)
T 4aez_A 260 AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT---GARVNTVDAGS-------------------------------- 304 (401)
T ss_dssp SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT---CCEEEEEECSS--------------------------------
T ss_pred ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC---CCEEEEEeCCC--------------------------------
Confidence 35788999999999999876 589999999874 44555554333
Q ss_pred CCceEEEccCCCEEEEEe
Q 031020 81 GPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 81 ~P~~~~LS~DGkrLyVaN 98 (167)
....+++|++|+.|+++.
T Consensus 305 ~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 305 QVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp CEEEEEECSSSSEEEEEE
T ss_pred cEEEEEECCCCCeEEEEe
Confidence 267899999999999975
No 154
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.47 E-value=0.021 Score=44.42 Aligned_cols=78 Identities=5% Similarity=0.054 Sum_probs=53.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..++.|.+|+|+++|++++ ..+.|+.||+.. .+...++.... +..
T Consensus 203 ~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~---~~~~~~~~~~~-------------------------------~~v 247 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVS-HDSTVCLADADK---KMAVATLASET-------------------------------LPL 247 (372)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTTEEEEEEGGG---TTEEEEEECSS-------------------------------CCE
T ss_pred CeEEEEEECCCCCEEEEEe-CCCEEEEEECCC---CceeEEEccCC-------------------------------CCe
Confidence 3578999999999998877 578999999875 34444443211 126
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
..+++++||+.|.++. .+.+..+|++..+|.++
T Consensus 248 ~~~~~~~~~~~l~~~~-----------------d~~i~i~~~~~~~~~~~ 280 (372)
T 1k8k_C 248 LAVTFITESSLVAAGH-----------------DCFPVLFTYDSAAGKLS 280 (372)
T ss_dssp EEEEEEETTEEEEEET-----------------TSSCEEEEEETTTTEEE
T ss_pred EEEEEecCCCEEEEEe-----------------CCeEEEEEccCcCceEE
Confidence 7889999999887763 23455577765446443
No 155
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.43 E-value=0.0081 Score=47.39 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=20.8
Q ss_pred eeEEEEecCCCEEEEE-eC-CCCcEEEEeccC
Q 031020 5 ITDFLISLDDRFLYFS-NW-LHGDIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVS-nw-~hg~I~qyDIsd 34 (167)
++++.+||||++|+++ +. +...|+++|+..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~ 69 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET 69 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCC
Confidence 5678899999996554 43 334677777653
No 156
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.41 E-value=0.018 Score=46.61 Aligned_cols=64 Identities=8% Similarity=-0.071 Sum_probs=45.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.|.+|+|++.+++|+-..+.|++||+.. .+...++...+ ..+..
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~-----------------------------~~~~v 179 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT---GAAVLTLGPDV-----------------------------HPDTI 179 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTT---TEEEEEECTTT-----------------------------CCSCE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCC---CCccEEEecCC-----------------------------CCCce
Confidence 34788999999965555666789999999875 44444442111 11236
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||++|+++.
T Consensus 180 ~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 180 YSVDWSRDGALICTSC 195 (402)
T ss_dssp EEEEECTTSSCEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 7899999999999886
No 157
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.41 E-value=0.039 Score=42.75 Aligned_cols=60 Identities=18% Similarity=0.155 Sum_probs=43.9
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++.+.+|+|+++|..+. ..+.|+.|++.+ .++...+. + ..+...
T Consensus 25 ~v~~~~~s~~~~~l~s~~-~dg~i~iw~~~~---~~~~~~~~--~-----------------------------h~~~v~ 69 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSS-ADKLIKIWGAYD---GKFEKTIS--G-----------------------------HKLGIS 69 (312)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEETTT---CCEEEEEC--C-----------------------------CSSCEE
T ss_pred cEEEEEECCCCCEEEEee-CCCeEEEEeCCC---cccchhhc--c-----------------------------CCCceE
Confidence 578999999999987665 578999999865 33333321 1 112367
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++++||++|+.+.
T Consensus 70 ~~~~~~~~~~l~s~~ 84 (312)
T 4ery_A 70 DVAWSSDSNLLVSAS 84 (312)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEEcCCCCEEEEEC
Confidence 789999999999886
No 158
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.40 E-value=0.041 Score=49.03 Aligned_cols=59 Identities=12% Similarity=0.267 Sum_probs=39.8
Q ss_pred eeEEEEecCCCEEEEEeCCCC----cEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCC
Q 031020 5 ITDFLISLDDRFLYFSNWLHG----DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 80 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg----~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g 80 (167)
+..+.+||||++|.++.-..| .|+++|+.. .+..... ..+ .+
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t---g~~~~~~-~~~---------------------------~~--- 172 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG---AKELPDV-LER---------------------------VK--- 172 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT---TEEEEEE-EEE---------------------------EC---
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC---CCCCccc-ccC---------------------------cc---
Confidence 568899999998865544333 799999864 3333211 111 01
Q ss_pred CCceEEEccCCCEEEEEe
Q 031020 81 GPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 81 ~P~~~~LS~DGkrLyVaN 98 (167)
...++.||||++||++.
T Consensus 173 -~~~~~wspDg~~l~~~~ 189 (710)
T 2xdw_A 173 -FSCMAWTHDGKGMFYNA 189 (710)
T ss_dssp -SCCEEECTTSSEEEEEE
T ss_pred -cceEEEEeCCCEEEEEE
Confidence 45688999999999876
No 159
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.38 E-value=0.043 Score=43.55 Aligned_cols=59 Identities=14% Similarity=0.086 Sum_probs=44.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|||+++|..+. ..+.|+.||+.. .+...++...+ ...
T Consensus 198 ~v~~~~~sp~g~~l~s~~-~dg~i~iwd~~~---~~~~~~~~~~~--------------------------------~v~ 241 (319)
T 3frx_A 198 NINTLTASPDGTLIASAG-KDGEIMLWNLAA---KKAMYTLSAQD--------------------------------EVF 241 (319)
T ss_dssp CEEEEEECTTSSEEEEEE-TTCEEEEEETTT---TEEEEEEECCS--------------------------------CEE
T ss_pred cEEEEEEcCCCCEEEEEe-CCCeEEEEECCC---CcEEEEecCCC--------------------------------cEE
Confidence 467899999999986655 578999999875 45544443211 156
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|.++.
T Consensus 242 ~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 242 SLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEECSSSSEEEEEE
T ss_pred EEEEcCCCCEEEEEc
Confidence 799999999998887
No 160
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.032 Score=44.35 Aligned_cols=31 Identities=3% Similarity=0.153 Sum_probs=26.6
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP 35 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp 35 (167)
+-++.|.+|||+++|..++ .+.|++||+...
T Consensus 215 ~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~ 245 (343)
T 3lrv_A 215 AKIKEVKFADNGYWMVVEC--DQTVVCFDLRKD 245 (343)
T ss_dssp SCEEEEEECTTSSEEEEEE--SSBEEEEETTSS
T ss_pred CCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCC
Confidence 4578999999999999888 459999998763
No 161
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.34 E-value=0.03 Score=44.58 Aligned_cols=64 Identities=9% Similarity=0.140 Sum_probs=46.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCC-CeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKN-PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~-pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
..+..|.+|++++++++++-..+.|+.||+..... .++.....- .+.
T Consensus 205 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--------------------------------~~~ 252 (383)
T 3ei3_B 205 AKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH--------------------------------EKP 252 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC--------------------------------SSC
T ss_pred CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC--------------------------------CCc
Confidence 45789999999995556666788999999986332 233333321 123
Q ss_pred CceEEEcc-CCCEEEEEe
Q 031020 82 PQMIQLSL-DGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~-DGkrLyVaN 98 (167)
...+++|+ ||++|+++.
T Consensus 253 v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 253 VNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp EEEEEECTTTSCEEEEEE
T ss_pred eEEEEEcCCCCCEEEEEc
Confidence 77899999 999999887
No 162
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.30 E-value=0.016 Score=47.60 Aligned_cols=61 Identities=13% Similarity=-0.082 Sum_probs=44.2
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.++.|.+|||++.+.+|+-..+.|++||+.. .++. .+-| ..+.-.
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~---~~~~---~~~~-----------------------------H~~~V~ 303 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDSSL---SELF---RSQA-----------------------------HRDFVR 303 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTC---CEEE---EECC-----------------------------CSSCEE
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEECCC---CcEE---EEcC-----------------------------CCCCEE
Confidence 4788999999966556666789999999764 3332 1222 123367
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++||||++|+++-+
T Consensus 304 ~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 304 DATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEEECSSSTTEEEEEE
T ss_pred EEEEeCCCCeEEEEEc
Confidence 8999999999988874
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.28 E-value=0.019 Score=50.17 Aligned_cols=56 Identities=11% Similarity=0.101 Sum_probs=38.1
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
++.+.+||| ++|.++. .+.|++||+.. .++.. +..+. +....
T Consensus 84 v~~~~~spd-~~~~~~~--~~~i~~~d~~~---~~~~~-l~~~~-------------------------------~~~~~ 125 (706)
T 2z3z_A 84 SFRTLDAGR-GLVVLFT--QGGLVGFDMLA---RKVTY-LFDTN-------------------------------EETAS 125 (706)
T ss_dssp CEEEEETTT-TEEEEEE--TTEEEEEETTT---TEEEE-EECCT-------------------------------TCCTT
T ss_pred ceeEEECCC-CeEEEEE--CCEEEEEECCC---CceEE-ccCCc-------------------------------ccccC
Confidence 788999999 5555553 38999999864 33321 11111 12677
Q ss_pred EEEccCCCEEEEEe
Q 031020 85 IQLSLDGKRLYVTN 98 (167)
Q Consensus 85 ~~LS~DGkrLyVaN 98 (167)
+++||||++|+.+.
T Consensus 126 ~~~SpdG~~la~~~ 139 (706)
T 2z3z_A 126 LDFSPVGDRVAYVR 139 (706)
T ss_dssp CEECTTSSEEEEEE
T ss_pred CcCCCCCCEEEEEE
Confidence 89999999998764
No 164
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.25 E-value=0.022 Score=49.24 Aligned_cols=28 Identities=7% Similarity=-0.027 Sum_probs=25.9
Q ss_pred eEEEEecCCCEEEEEeCCCCcEEEEecc
Q 031020 6 TDFLISLDDRFLYFSNWLHGDIRQYNIE 33 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~hg~I~qyDIs 33 (167)
..|++++|+++|||+.+.++.|++++.+
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 4699999999999999999999999875
No 165
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.25 E-value=0.024 Score=52.99 Aligned_cols=61 Identities=11% Similarity=-0.009 Sum_probs=42.8
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+..+.+||||++|++++. .+.|+.||+.. .++.... .+. .+..
T Consensus 379 ~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~t---g~~~~~~-~~~------------------------------~~~v 423 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVAND-RFEIMTVDLET---GKPTVIE-RSR------------------------------EAMI 423 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEET-TSEEEEEETTT---CCEEEEE-ECS------------------------------SSCC
T ss_pred cceeeeEECCCCCEEEEECC-CCeEEEEECCC---CceEEec-cCC------------------------------CCCc
Confidence 34678999999999987775 57999999864 2332211 121 1124
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++||||++|.++.
T Consensus 424 ~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGF 439 (1045)
T ss_dssp CCEEECTTSCEEEEEE
T ss_pred cceEECCCCCeEEEEe
Confidence 7899999999998776
No 166
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.24 E-value=0.03 Score=43.82 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=47.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..++.|.+++++++|++++-..|.|+.||+.....+... +... ........... -....+..
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~--~~~~--------------~~~~~~~~~~~--~~~~~~~v 248 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLIT--LDQH--------------NGKKSQAVESA--NTAHNGKV 248 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEE--CCTT--------------TTCSCCCTTTS--SCSCSSCE
T ss_pred CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccc--cccc--------------ccccceeeccc--cccccCce
Confidence 457899999999987777777899999998763321111 1000 00000000000 01223457
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||++|+++.
T Consensus 249 ~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVG 264 (408)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred eEEEEcCCCCEEEEec
Confidence 8899999999999987
No 167
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.23 E-value=0.086 Score=39.60 Aligned_cols=64 Identities=11% Similarity=0.174 Sum_probs=44.5
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCC-eEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNP-VLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~p-klvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.-++.|.+|+|+++|..++ ..|.|++||+...... ++...+. + ..+.
T Consensus 12 ~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~--~-----------------------------~~~~ 59 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCS-SDQHIKVFKLDKDTSNWELSDSWR--A-----------------------------HDSS 59 (351)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEEECSSSCCEEEEEEEE--C-----------------------------CSSC
T ss_pred cceeEEEEcCCCCEEEEee-CCCeEEEEECCCCCCcceecceec--c-----------------------------CCCc
Confidence 4588999999999997776 5789999999853322 3333332 1 1122
Q ss_pred CceEEEcc--CCCEEEEEe
Q 031020 82 PQMIQLSL--DGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~--DGkrLyVaN 98 (167)
...+++++ ||++|+++.
T Consensus 60 v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 60 IVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp EEEEEECCGGGCSEEEEEE
T ss_pred EEEEEEcCCCCCCEEEEEc
Confidence 56788888 688888876
No 168
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.22 E-value=0.014 Score=47.45 Aligned_cols=63 Identities=14% Similarity=0.109 Sum_probs=37.8
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++++++|+|+++|-.| ..|.|++||+..... ..+.+....| ..+.-.
T Consensus 96 ~V~~~~~s~d~~~l~~s--~dg~v~lWd~~~~~~-~~~~~~~~~~-----------------------------h~~~V~ 143 (357)
T 4g56_B 96 GVTDVAWVSEKGILVAS--DSGAVELWEILEKES-LLVNKFAKYE-----------------------------HDDIVK 143 (357)
T ss_dssp CEEEEEEETTTEEEEEE--TTSCEEEC---------CCCCEEECC-----------------------------CSSCEE
T ss_pred CEEEEEEcCCCCEEEEE--CCCEEEEeeccccce-eEEEeeccCC-----------------------------CCCCEE
Confidence 47899999999877544 478999999875321 1111111111 122357
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|+.+.
T Consensus 144 ~v~~spdg~~l~sgs 158 (357)
T 4g56_B 144 TLSVFSDGTQAVSGG 158 (357)
T ss_dssp EEEECSSSSEEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 789999999998875
No 169
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.21 E-value=0.053 Score=44.31 Aligned_cols=60 Identities=20% Similarity=0.210 Sum_probs=43.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+..+.+|+|+++|..+. ..+.|++||+.. .+.+..+. | ..+.-.
T Consensus 125 ~v~~v~~s~dg~~l~s~~-~d~~i~iwd~~~---~~~~~~~~--~-----------------------------h~~~v~ 169 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGA-EDRLIRIWDIEN---RKIVMILQ--G-----------------------------HEQDIY 169 (393)
T ss_dssp BEEEEEECTTSSEEEEEE-TTSCEEEEETTT---TEEEEEEC--C-----------------------------CSSCEE
T ss_pred eEEEEEECCCCCEEEEEc-CCCeEEEEECCC---CcEEEEEc--c-----------------------------CCCCEE
Confidence 378999999999997666 578999999874 34433221 2 012256
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++++||++|+.+.
T Consensus 170 ~~~~~p~~~~l~s~s 184 (393)
T 1erj_A 170 SLDYFPSGDKLVSGS 184 (393)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEEcCCCCEEEEec
Confidence 788999999998775
No 170
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.20 E-value=0.038 Score=48.44 Aligned_cols=62 Identities=11% Similarity=0.100 Sum_probs=47.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.|.+|||+++|.++. ..|.|.+||+.. .+.+.++... .+..
T Consensus 14 ~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~---~~~~~~~~~~-------------------------------~~~v 58 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTL-YSGRVEIWNYET---QVEVRSIQVT-------------------------------ETPV 58 (814)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEETTT---TEEEEEEECC-------------------------------SSCE
T ss_pred CceEEEEECCCCCEEEEEe-CCCEEEEEECCC---CceEEEEecC-------------------------------CCcE
Confidence 4578999999999998776 578999999764 5555444411 1226
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
+.+++|+||++|.++.+
T Consensus 59 ~~~~~s~~~~~l~~~~~ 75 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSD 75 (814)
T ss_dssp EEEEEEGGGTEEEEEET
T ss_pred EEEEEeCCCCEEEEEeC
Confidence 78899999999999873
No 171
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.18 E-value=0.036 Score=42.73 Aligned_cols=64 Identities=16% Similarity=0.185 Sum_probs=45.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..++.|.+|+|+++|+++. ..+.|++||+.........-.+. + ..+..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~--~-----------------------------~~~~v 59 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSL--R-----------------------------YKHPL 59 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEE--E-----------------------------CSSCE
T ss_pred CcEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeee--e-----------------------------cCCce
Confidence 4588999999999998776 57899999998633211221221 1 11226
Q ss_pred ceEEEccCCC-EEEEEe
Q 031020 83 QMIQLSLDGK-RLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGk-rLyVaN 98 (167)
..++++++|+ +|+++.
T Consensus 60 ~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 60 LCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp EEEEEEESSSEEEEEEE
T ss_pred EEEEECCCCCcEEEEEc
Confidence 7889999999 888887
No 172
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.047 Score=42.87 Aligned_cols=59 Identities=17% Similarity=0.179 Sum_probs=43.8
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++.|.+|+|+++|+++.. .|.|++||.+ .+...++... .+...
T Consensus 110 ~v~~~~~s~~~~~l~~~~~-dg~i~i~~~~----~~~~~~~~~~-------------------------------~~~v~ 153 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVE-NGELRLWNKT----GALLNVLNFH-------------------------------RAPIV 153 (425)
T ss_dssp CEEEEEECTTSSEEEEEET-TSCEEEEETT----SCEEEEECCC-------------------------------CSCEE
T ss_pred ceEEEEEcCCCCEEEEEeC-CCeEEEEeCC----CCeeeeccCC-------------------------------CccEE
Confidence 6889999999999988775 6899999932 3344333211 12367
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.++++++|++|+++.
T Consensus 154 ~~~~~~~~~~l~~~~ 168 (425)
T 1r5m_A 154 SVKWNKDGTHIISMD 168 (425)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 899999999999887
No 173
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.17 E-value=0.037 Score=44.26 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=44.5
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.+.+|+|+++|+.+. ..+.|+.||+.... .+..+. + ..+..
T Consensus 140 ~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~---~~~~~~--~-----------------------------h~~~v 184 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSS-QDMQLKIWSVKDGS---NPRTLI--G-----------------------------HRATV 184 (420)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCC---CCEEEE--C-----------------------------CSSCE
T ss_pred CccEEEEECCCCCEEEEEe-CCCeEEEEeCCCCc---CceEEc--C-----------------------------CCCcE
Confidence 4578999999999987766 47899999987532 222222 1 11236
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||++|+.+.
T Consensus 185 ~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSAS 200 (420)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCEEEEEc
Confidence 7889999999999877
No 174
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.16 E-value=0.034 Score=44.58 Aligned_cols=59 Identities=20% Similarity=0.164 Sum_probs=42.0
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..+.+|||+++|..+. ..+.|+.||+.. .+..-.+...+ .. ...
T Consensus 125 ~~~~~~spdg~~l~~g~-~dg~v~i~~~~~---~~~~~~~~~~~---------------------------~~----v~~ 169 (321)
T 3ow8_A 125 AWTLAFSPDSQYLATGT-HVGKVNIFGVES---GKKEYSLDTRG---------------------------KF----ILS 169 (321)
T ss_dssp CCCEEECTTSSEEEEEC-TTSEEEEEETTT---CSEEEEEECSS---------------------------SC----EEE
T ss_pred EEEEEECCCCCEEEEEc-CCCcEEEEEcCC---CceeEEecCCC---------------------------ce----EEE
Confidence 45689999999997665 578999999875 23332332222 11 567
Q ss_pred EEEccCCCEEEEEe
Q 031020 85 IQLSLDGKRLYVTN 98 (167)
Q Consensus 85 ~~LS~DGkrLyVaN 98 (167)
+++||||++|.++.
T Consensus 170 ~~~spdg~~lasg~ 183 (321)
T 3ow8_A 170 IAYSPDGKYLASGA 183 (321)
T ss_dssp EEECTTSSEEEEEE
T ss_pred EEECCCCCEEEEEc
Confidence 89999999999886
No 175
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.036 Score=42.95 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=44.4
Q ss_pred CceeEEEEecC---CCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 3 GLITDFLISLD---DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 3 ~l~tdI~IS~D---dRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
..++.|.+||| +++|+.++ ..|.|+.||+.....+... .+.... ...
T Consensus 207 ~~v~~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~-~~~~~~----------------------------~~~ 256 (379)
T 3jrp_A 207 DWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPWKK-TLLKEE----------------------------KFP 256 (379)
T ss_dssp SCEEEEEECCCCSSSEEEEEEE-TTSCEEEEEESSTTSCCEE-EESSSS----------------------------CCS
T ss_pred CcEeEEEECCCCCCCCeEEEEe-CCCEEEEEeCCCCCcccee-eeeccc----------------------------cCC
Confidence 34789999999 77776655 5789999998863322221 111111 122
Q ss_pred CCCceEEEccCCCEEEEEe
Q 031020 80 GGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaN 98 (167)
+....+++|+||++|+++.
T Consensus 257 ~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 257 DVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp SCEEEEEECSSSCCEEEEE
T ss_pred CcEEEEEEcCCCCEEEEec
Confidence 3367789999999999987
No 176
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.14 E-value=0.12 Score=41.06 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=54.2
Q ss_pred CceeEEEEec-CCCEEEEEeCCCCcEEEEeccCCCCCe-EEEEEEe---------------Ccee------------ecC
Q 031020 3 GLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPKNPV-LTGQIWV---------------GGLF------------RKG 53 (167)
Q Consensus 3 ~l~tdI~IS~-DdRfLYVSnw~hg~I~qyDIsdp~~pk-lvg~v~~---------------GG~~------------~~~ 53 (167)
..++.|.+|+ |+++|++++ ..+.|++||+.....++ +.+.... +..+ ..+
T Consensus 251 ~~v~~~~~s~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d 329 (383)
T 3ei3_B 251 KPVNAAYFNPTDSTKLLTTD-QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDK 329 (383)
T ss_dssp SCEEEEEECTTTSCEEEEEE-SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCC
T ss_pred CceEEEEEcCCCCCEEEEEc-CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCC
Confidence 4578999999 999998776 47899999998644322 2211000 0000 023
Q ss_pred CceeEeeCCCCCCCCCCccccCccCCCCCceEEEccCCCEEEEEe
Q 031020 54 SPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 54 ~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS~DGkrLyVaN 98 (167)
+.|+|-.-..... ....++....+....+++|+||++|..+.
T Consensus 330 ~~i~iwd~~~~~~---~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 330 RTIDIYDANSGGL---VHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp CCEEEEETTTCCE---EEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred CeEEEEecCCCce---eeeecCCCCCceEEEEEEecCccEEEEec
Confidence 5566655332221 22233333344466679999999997774
No 177
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.12 E-value=0.034 Score=48.80 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=50.4
Q ss_pred CCceeEEEEecCCCEEEEEeCCCCcEEEEeccCCC--CCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 2 PGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPK--NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 2 p~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~--~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
|+-+-.|.+.+...+|||+.+..| |+.|+..... .++++..+..| ++.
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g-----------------------------~l~ 228 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGR-----------------------------HLT 228 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSS-----------------------------SBC
T ss_pred CCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCC-----------------------------ccc
Confidence 455678899999999999999977 9999965221 36677555432 234
Q ss_pred CCCceEEE--ccCCC-EEEEEe
Q 031020 80 GGPQMIQL--SLDGK-RLYVTN 98 (167)
Q Consensus 80 g~P~~~~L--S~DGk-rLyVaN 98 (167)
..|+-|+| ..+|+ +|+|++
T Consensus 229 aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 229 RDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp SCEEEEEEEECGGGCEEEEEEE
T ss_pred cCcceEEEEecCCCCEEEEEEc
Confidence 44899998 78888 899999
No 178
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.12 E-value=0.036 Score=46.25 Aligned_cols=63 Identities=10% Similarity=0.044 Sum_probs=45.6
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCC-eEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNP-VLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~p-klvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
+-++.+.+|||+++|.+++ .+.|++||+.+...+ +....+. | ..+.
T Consensus 19 ~~v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~--~-----------------------------h~~~ 65 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQFT--G-----------------------------HGSS 65 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEEC--T-----------------------------TTTS
T ss_pred CceeEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEEe--c-----------------------------CCCc
Confidence 4578899999999999988 679999998853222 3333221 1 1123
Q ss_pred -CceEEEcc--CCCEEEEEe
Q 031020 82 -PQMIQLSL--DGKRLYVTN 98 (167)
Q Consensus 82 -P~~~~LS~--DGkrLyVaN 98 (167)
...+++|| ||++|+++.
T Consensus 66 ~v~~~~~sp~~~~~~l~s~~ 85 (615)
T 1pgu_A 66 VVTTVKFSPIKGSQYLCSGD 85 (615)
T ss_dssp CEEEEEECSSTTCCEEEEEE
T ss_pred eEEEEEECcCCCCCEEEEec
Confidence 57899999 999999887
No 179
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.12 E-value=0.0072 Score=53.03 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=39.7
Q ss_pred eeEEEEecCCCEEEEEeC--------CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCc
Q 031020 5 ITDFLISLDDRFLYFSNW--------LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH 76 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw--------~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~ 76 (167)
+..+.+||||++|.++.. ..+.|+.||+.. .++... +
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~---g~~~~~--------------------------------~ 106 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN---GEFVRG--------------------------------N 106 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT---TEECCS--------------------------------S
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC---Cccccc--------------------------------e
Confidence 568999999999876653 247899998764 222000 0
Q ss_pred cCCCCCceEEEccCCCEEEEEe
Q 031020 77 RLRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 77 ~~~g~P~~~~LS~DGkrLyVaN 98 (167)
++.+..+.+++||||++|..+.
T Consensus 107 ~l~~~~~~~~~SPDG~~la~~~ 128 (719)
T 1z68_A 107 ELPRPIQYLCWSPVGSKLAYVY 128 (719)
T ss_dssp CCCSSBCCEEECSSTTCEEEEE
T ss_pred ecCcccccceECCCCCEEEEEE
Confidence 1112367899999999988764
No 180
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.07 E-value=0.1 Score=45.52 Aligned_cols=86 Identities=17% Similarity=0.140 Sum_probs=51.9
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCcee-----------------ecCCceeEeeCCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLF-----------------RKGSPVVAVTDDGQPY 66 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~-----------------~~~~~v~v~~~~~~~~ 66 (167)
-+..+.+|||+++|..+. ..+.|+.||+.. .+...++..+..+ ..++.+++..-+...
T Consensus 241 ~V~~v~~spdg~~l~s~s-~D~~v~lWd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~- 315 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASAS-ADKTIKIWNVAT---LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS- 315 (611)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTT---TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE-
T ss_pred CEEEEEECCCCCEEEEEe-CCCeEEEEeCCC---CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC-
Confidence 478899999999986554 678999999864 5555555433211 112333333211110
Q ss_pred CCCCccccCccCCCCCceEEEccCCCEEEEEe
Q 031020 67 QSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 67 ~p~~~~~~g~~~~g~P~~~~LS~DGkrLyVaN 98 (167)
.....+|. .+.-..+++||||++|+.+.
T Consensus 316 --~~~~~~gh--~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 316 --IDQVRYGH--NKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp --EEEEECCC--SSCEEEEEECTTSSEEEEEE
T ss_pred --cceEEcCC--CCCEEEEEEeCCCCEEEEEe
Confidence 01122232 24467889999999999886
No 181
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.06 E-value=0.083 Score=40.66 Aligned_cols=64 Identities=16% Similarity=0.152 Sum_probs=45.1
Q ss_pred CceeEEEEec-CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~-DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.-++.|.+|+ |+++|+.++ ..+.|+.||+.. .+....+..-. ...+.
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~---~~~~~~~~~~~----------------------------~~~~~ 163 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVS-KDHALRLWNIQT---DTLVAIFGGVE----------------------------GHRDE 163 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEE-TTSCEEEEETTT---TEEEEEECSTT----------------------------SCSSC
T ss_pred CcEEEEEECCCCCCEEEEEe-CCCeEEEEEeec---CeEEEEecccc----------------------------cccCc
Confidence 4578999999 888886666 478999999875 34443331000 11234
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
...++++++|++|+++.
T Consensus 164 v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCG 180 (366)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred eeEEEECCCCCEEEEec
Confidence 78899999999999887
No 182
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.05 E-value=0.026 Score=44.91 Aligned_cols=62 Identities=13% Similarity=0.172 Sum_probs=43.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-++.+.+|||+++|.+++ ..+.|+.||+...... ..++. ++ ..+...
T Consensus 172 ~i~~~~~~pdg~~lasg~-~dg~i~iwd~~~~~~~--~~~~~-~~-----------------------------h~~~v~ 218 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYS-PDGILDVYNLSSPDQA--SSRFP-VD-----------------------------EEAKIK 218 (343)
T ss_dssp CCCEEEECTTSCEEEEEC-TTSCEEEEESSCTTSC--CEECC-CC-----------------------------TTSCEE
T ss_pred ceEEEEECCCCCEEEEEc-CCCEEEEEECCCCCCC--ccEEe-cc-----------------------------CCCCEE
Confidence 367899999999987665 5789999998763222 01121 11 112367
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|.++.
T Consensus 219 ~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 219 EVKFADNGYWMVVEC 233 (343)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEEeCCCCEEEEEe
Confidence 899999999999886
No 183
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.065 Score=42.04 Aligned_cols=60 Identities=22% Similarity=0.186 Sum_probs=43.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..++.+.+|+|+ +| +++-..+.|+.||+.. .+....+.... +..
T Consensus 290 ~~i~~~~~~~~~-~l-~~~~~d~~i~i~d~~~---~~~~~~~~~~~-------------------------------~~i 333 (425)
T 1r5m_A 290 QSIVSASWVGDD-KV-ISCSMDGSVRLWSLKQ---NTLLALSIVDG-------------------------------VPI 333 (425)
T ss_dssp SCEEEEEEETTT-EE-EEEETTSEEEEEETTT---TEEEEEEECTT-------------------------------CCE
T ss_pred ccEEEEEECCCC-EE-EEEeCCCcEEEEECCC---CcEeEecccCC-------------------------------ccE
Confidence 457899999999 44 4555689999999864 45554443211 127
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++|+||++|+++.
T Consensus 334 ~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 334 FAGRISQDGQKYAVAF 349 (425)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEE
Confidence 7899999999999988
No 184
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.03 E-value=0.039 Score=44.38 Aligned_cols=29 Identities=14% Similarity=0.366 Sum_probs=25.9
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
-++.|.+|+|+++|..+.. +.|++||+..
T Consensus 287 ~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~ 315 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDY--LSVKVWDLNM 315 (447)
T ss_dssp CEEEEEECTTSSEEEEEES--SEEEEEETTC
T ss_pred eEEEEEECCCCCEEEEeeC--CeEEEEeCCC
Confidence 6889999999999988776 9999999874
No 185
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.02 E-value=0.079 Score=41.00 Aligned_cols=60 Identities=8% Similarity=0.002 Sum_probs=42.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+++|.+|+|+++|+.++. .+.|++||+.. .+.+..+.... +.-.
T Consensus 67 ~v~~~~~~~~~~~l~s~~~-d~~i~vwd~~~---~~~~~~~~~~~-------------------------------~~v~ 111 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASD-DKTLKIWDVSS---GKCLKTLKGHS-------------------------------NYVF 111 (312)
T ss_dssp CEEEEEECTTSSEEEEEET-TSEEEEEETTT---CCEEEEEECCS-------------------------------SCEE
T ss_pred ceEEEEEcCCCCEEEEECC-CCEEEEEECCC---CcEEEEEcCCC-------------------------------CCEE
Confidence 4788999999999987764 78999999875 34443332111 1145
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.++++++|++|+.+.
T Consensus 112 ~~~~~~~~~~l~s~~ 126 (312)
T 4ery_A 112 CCNFNPQSNLIVSGS 126 (312)
T ss_dssp EEEECSSSSEEEEEE
T ss_pred EEEEcCCCCEEEEEe
Confidence 677899999888776
No 186
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.98 E-value=0.13 Score=41.07 Aligned_cols=63 Identities=10% Similarity=0.027 Sum_probs=44.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-++.|.+|||+++|..+. ..+.|+.||+.. .+........+ ...+.
T Consensus 227 ~~v~~v~~~p~~~~l~s~s-~d~~v~iwd~~~---~~~~~~~~~~~-----------------------------~~~~v 273 (340)
T 1got_B 227 SDINAICFFPNGNAFATGS-DDATCRLFDLRA---DQELMTYSHDN-----------------------------IICGI 273 (340)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTT---TEEEEEECCTT-----------------------------CCSCE
T ss_pred CCEEEEEEcCCCCEEEEEc-CCCcEEEEECCC---CcEEEEEccCC-----------------------------cccce
Confidence 3578899999999987665 578999999874 33322221111 11235
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++||||++|.++.
T Consensus 274 ~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 274 TSVSFSKSGRLLLAGY 289 (340)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEC
Confidence 6789999999999987
No 187
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.97 E-value=0.12 Score=40.45 Aligned_cols=31 Identities=10% Similarity=0.194 Sum_probs=25.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
..+..|.+|||+++|..+. ..+.|+.||+..
T Consensus 98 ~~v~~~~~~~~~~~l~sgs-~D~~v~lWd~~~ 128 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYVLSGS-DDLTVKLWNWEN 128 (304)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSCEEEEEGGG
T ss_pred CcEEEEEEcCCCCEEEEEC-CCCeEEEEECCC
Confidence 4578999999999986555 578999999875
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.96 E-value=0.053 Score=42.69 Aligned_cols=18 Identities=6% Similarity=0.073 Sum_probs=14.6
Q ss_pred CceEEEccCCCEEEEEeC
Q 031020 82 PQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNs 99 (167)
...+++|+||++|+++.+
T Consensus 353 ~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 353 HPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp CCCCEECTTSSEEEEEEC
T ss_pred CCCceEccCCCeEEEEec
Confidence 455689999999998873
No 189
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.94 E-value=0.028 Score=43.32 Aligned_cols=64 Identities=17% Similarity=0.186 Sum_probs=43.9
Q ss_pred eeEEEEecC--CCEEEEEeCCCCcEEEEeccCCCCCe-EEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 5 ITDFLISLD--DRFLYFSNWLHGDIRQYNIEDPKNPV-LTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 5 ~tdI~IS~D--dRfLYVSnw~hg~I~qyDIsdp~~pk-lvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
++.|.+|+| +++|++++ ..|.|++||+......+ ....+. + ....+.
T Consensus 288 v~~~~~s~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~--~---------------------------~~~~~~ 337 (366)
T 3k26_A 288 IWYMRFSMDFWQKMLALGN-QVGKLYVWDLEVEDPHKAKCTTLT--H---------------------------HKCGAA 337 (366)
T ss_dssp SSCCCCEECTTSSEEEEEC-TTSCEEEEECCSSSGGGCEEEEEC--C---------------------------TTCCSC
T ss_pred EEEEEEcCCCCCcEEEEEe-cCCcEEEEECCCCCCccccceEEc--c---------------------------cccCCc
Confidence 567889999 99998775 57899999988532111 222221 1 011233
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
...+++|+||++|+++.
T Consensus 338 v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 338 IRQTSFSRDSSILIAVC 354 (366)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred eEEEEeCCCCCeEEEEe
Confidence 78899999999999988
No 190
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=95.94 E-value=0.054 Score=47.14 Aligned_cols=31 Identities=10% Similarity=-0.032 Sum_probs=22.8
Q ss_pred ceeEEEEecCCCEEEE-EeCCC--CcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYF-SNWLH--GDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYV-Snw~h--g~I~qyDIsd 34 (167)
.+..+.+||||++|++ +++.. ..|+.||+..
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 4678999999999954 46543 4678888764
No 191
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.94 E-value=0.12 Score=41.37 Aligned_cols=62 Identities=8% Similarity=0.075 Sum_probs=42.9
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|||+++|..+. ..+.|+.||+.. ...+.+..+ .| ..+.-.
T Consensus 63 ~v~~~~~sp~g~~l~s~s-~D~~v~iw~~~~-~~~~~~~~~--~~-----------------------------h~~~v~ 109 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASAS-FDATTCIWKKNQ-DDFECVTTL--EG-----------------------------HENEVK 109 (345)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEEECC-C-EEEEEEE--CC-----------------------------CSSCEE
T ss_pred cEEEEEECCCCCEEEEEE-CCCcEEEEEccC-CCeEEEEEc--cC-----------------------------CCCCce
Confidence 478899999999997666 478999999874 222222221 12 112367
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|+.+.
T Consensus 110 ~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 110 SVAWAPSGNLLATCS 124 (345)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEEeCCCCEEEEEE
Confidence 889999999988876
No 192
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.89 E-value=0.016 Score=54.79 Aligned_cols=65 Identities=22% Similarity=0.252 Sum_probs=50.1
Q ss_pred CCceeEEEEecCCCEEEEEeCCCCcEEEEeccCC-----C---CC--eEEEEEEeCceeecCCceeEeeCCCCCCCCCCc
Q 031020 2 PGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP-----K---NP--VLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 71 (167)
Q Consensus 2 p~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp-----~---~p--klvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~ 71 (167)
|-.+-.+.+||||||+|+++=+...+.+||++.- . .| .+++++.+|=
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl----------------------- 378 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL----------------------- 378 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-----------------------
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC-----------------------
Confidence 3345578999999999999999999999999820 0 11 2466666542
Q ss_pred cccCccCCCCCceEEEccCCCEEEEEeC
Q 031020 72 EVQGHRLRGGPQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 72 ~~~g~~~~g~P~~~~LS~DGkrLyVaNs 99 (167)
||...+++.+| ..|.|--
T Consensus 379 ---------GPlHt~Fd~~G-~aYTtlf 396 (638)
T 3sbq_A 379 ---------GPLHTTFDGRG-NAYTTLF 396 (638)
T ss_dssp ---------CEEEEEECSSS-EEEEEET
T ss_pred ---------cccEEEECCCC-ceEeeee
Confidence 49999999999 8888764
No 193
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.89 E-value=0.12 Score=41.22 Aligned_cols=31 Identities=26% Similarity=0.336 Sum_probs=25.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
..++.+.+|+|+++|+.+. ..+.|+.||+..
T Consensus 182 ~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~ 212 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSAS-LDGTIRLWECGT 212 (420)
T ss_dssp SCEEEEEEETTTTEEEEEE-TTSCEEEEETTT
T ss_pred CcEEEEEEcCCCCEEEEEc-CCCcEEEeECCC
Confidence 4578999999999998666 478999999874
No 194
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.87 E-value=0.033 Score=48.69 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=40.9
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..+.+|||+++|.+++. .+.|+.||+.. .++. .+..-+ ..+....
T Consensus 451 v~~va~spdg~~lasgs~-D~~v~lwd~~~---~~~~-~~~~~~-----------------------------h~~~v~~ 496 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQ-DSKVHVYKLSG---ASVS-EVKTIV-----------------------------HPAEITS 496 (611)
T ss_dssp EEEEEECTTSCEEEEEET-TSEEEEEEEET---TEEE-EEEEEE-----------------------------CSSCEEE
T ss_pred ceEEEEeCCCCEEEEeCC-CCeEEEEEccC---Ccee-eeeccC-----------------------------CCCceEE
Confidence 567889999998877764 67899999864 1221 111111 1123678
Q ss_pred EEEccCCCEEEEEe
Q 031020 85 IQLSLDGKRLYVTN 98 (167)
Q Consensus 85 ~~LS~DGkrLyVaN 98 (167)
+++||||++|..+.
T Consensus 497 v~fspdg~~las~s 510 (611)
T 1nr0_A 497 VAFSNNGAFLVATD 510 (611)
T ss_dssp EEECTTSSEEEEEE
T ss_pred EEECCCCCEEEEEc
Confidence 99999999998876
No 195
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.83 E-value=0.091 Score=40.32 Aligned_cols=63 Identities=17% Similarity=0.245 Sum_probs=43.8
Q ss_pred CceeEEEEecC---CCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 3 GLITDFLISLD---DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 3 ~l~tdI~IS~D---dRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
.-++.|.+|+| +++|..++ ..|.|++||+.... ..+...+.. ..
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~-~dg~i~iw~~~~~~-~~~~~~~~~-------------------------------h~ 86 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGS-WANDVRCWEVQDSG-QTIPKAQQM-------------------------------HT 86 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEE-TTSEEEEEEECTTS-CEEEEEEEE-------------------------------CS
T ss_pred CceEEEEEcCCCCCceEEEEEC-CCCcEEEEEcCCCC-ceeEEEecc-------------------------------cc
Confidence 45789999999 58886665 57899999997522 222222221 11
Q ss_pred CCCceEEEccCCCEEEEEe
Q 031020 80 GGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaN 98 (167)
+....+++++||++|+++.
T Consensus 87 ~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEECcCCCEEEEEc
Confidence 2367889999999999887
No 196
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.80 E-value=0.09 Score=41.49 Aligned_cols=65 Identities=11% Similarity=0.114 Sum_probs=44.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeC-ceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVG-GLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~G-G~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
..++.|.+|+|+ +|+ ++-..+.|++||+.. .+.+..+... +.. .-.+.
T Consensus 187 ~~i~~~~~~~~~-~l~-~~~~dg~i~i~d~~~---~~~~~~~~~~~~h~--------------------------~~~~~ 235 (397)
T 1sq9_A 187 QFATSVDISERG-LIA-TGFNNGTVQISELST---LRPLYNFESQHSMI--------------------------NNSNS 235 (397)
T ss_dssp CCCCEEEECTTS-EEE-EECTTSEEEEEETTT---TEEEEEEECCC-----------------------------CCCCC
T ss_pred CCceEEEECCCc-eEE-EEeCCCcEEEEECCC---CceeEEEecccccc--------------------------ccCCc
Confidence 346889999999 554 445688999999875 4555444420 000 00123
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
...+++++||++|+++.
T Consensus 236 i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp EEEEEECSSTTEEEEEE
T ss_pred cceEEECCCCCEEEEEe
Confidence 78899999999999887
No 197
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.80 E-value=0.072 Score=42.73 Aligned_cols=63 Identities=3% Similarity=-0.003 Sum_probs=43.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|||+++|..+. ..+.|+.||+......+.+..+. + ..+.-.
T Consensus 107 ~v~~v~~sp~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~--~-----------------------------h~~~v~ 154 (345)
T 3fm0_A 107 EVKSVAWAPSGNLLATCS-RDKSVWVWEVDEEDEYECVSVLN--S-----------------------------HTQDVK 154 (345)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEEECTTSCEEEEEEEC--C-----------------------------CCSCEE
T ss_pred CceEEEEeCCCCEEEEEE-CCCeEEEEECCCCCCeEEEEEec--C-----------------------------cCCCeE
Confidence 478899999999987666 47899999998644333332221 1 011256
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.++++|+|++|..+.
T Consensus 155 ~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 155 HVVWHPSQELLASAS 169 (345)
T ss_dssp EEEECSSSSCEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 688899999888775
No 198
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.80 E-value=0.074 Score=42.14 Aligned_cols=61 Identities=13% Similarity=0.044 Sum_probs=42.6
Q ss_pred CceeEEEEec-CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~-DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
..++.+.+|+ |+++|+.++ ..+.|+.||+.. .+.+.++... .+.
T Consensus 263 ~~v~~~~~s~~~~~~l~s~~-~dg~v~~wd~~~---~~~~~~~~~~-------------------------------~~~ 307 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLLLSSG-RDNTVLLWNPES---AEQLSQFPAR-------------------------------GNW 307 (416)
T ss_dssp SCEEEEEECSSCSSCEEEEE-SSSEEEEECSSS---CCEEEEEECS-------------------------------SSC
T ss_pred CceeEEEeCCCCCCeEEEEe-CCCCEEEeeCCC---CccceeecCC-------------------------------CCc
Confidence 4578999999 888887666 478999999775 4455444321 123
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
...+++||||++++++.
T Consensus 308 v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACA 324 (416)
T ss_dssp CCCEEECTTCTTEEEEC
T ss_pred eEEEEECCCCCCEEEEE
Confidence 67899999995555555
No 199
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.71 E-value=0.14 Score=41.34 Aligned_cols=63 Identities=11% Similarity=0.087 Sum_probs=43.8
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+..+.+|||+++|..+. ..+.|+.||+.. .+.+.... .. ....+.
T Consensus 241 ~~v~~v~~~p~~~~l~s~s-~D~~v~lwd~~~---~~~~~~~~-~~----------------------------~~~~~~ 287 (354)
T 2pbi_B 241 SDVNSVRYYPSGDAFASGS-DDATCRLYDLRA---DREVAIYS-KE----------------------------SIIFGA 287 (354)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTT---TEEEEEEC-CT----------------------------TCCSCE
T ss_pred CCeEEEEEeCCCCEEEEEe-CCCeEEEEECCC---CcEEEEEc-CC----------------------------Ccccce
Confidence 3478899999999887666 578999999875 22222111 11 111235
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++|+||++|+++.
T Consensus 288 ~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred eEEEEeCCCCEEEEEE
Confidence 6789999999999887
No 200
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.69 E-value=0.039 Score=45.25 Aligned_cols=31 Identities=13% Similarity=0.039 Sum_probs=27.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
-+..+.+|+|++.+++|+-..+.|+.||+..
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~ 201 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRC 201 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTS
T ss_pred ceEEEEecCCCCCceeeeccccccccccccc
Confidence 4678999999998889988899999999875
No 201
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.68 E-value=0.081 Score=40.70 Aligned_cols=73 Identities=16% Similarity=0.112 Sum_probs=46.6
Q ss_pred CceeEEEEec-CCCEEEEEeCCCCcEEEEeccCCC-C--CeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccC
Q 031020 3 GLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPK-N--PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 78 (167)
Q Consensus 3 ~l~tdI~IS~-DdRfLYVSnw~hg~I~qyDIsdp~-~--pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~ 78 (167)
.-+..|.+++ |+++|++++ ..|.|+.|++.... + .+....+..... ...|...
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 250 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRL----------------------NLKDTNL 250 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCC----------------------CTTCCSS
T ss_pred CceeEEEECCCCCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccc----------------------ccccccc
Confidence 4578899999 999988777 48899999987531 0 122222221110 0011122
Q ss_pred CCCCceEEEccCCCEEEEEe
Q 031020 79 RGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 79 ~g~P~~~~LS~DGkrLyVaN 98 (167)
.+....+++|+||++|+++.
T Consensus 251 ~~~i~~~~~s~~~~~l~~~~ 270 (342)
T 1yfq_A 251 AYPVNSIEFSPRHKFLYTAG 270 (342)
T ss_dssp CCCEEEEEECTTTCCEEEEE
T ss_pred ceeEEEEEEcCCCCEEEEec
Confidence 34577899999999999887
No 202
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.66 E-value=0.028 Score=49.30 Aligned_cols=66 Identities=20% Similarity=0.317 Sum_probs=42.3
Q ss_pred eEEEEecC---CCEEEEEeCC------------CCcEEEEeccCCCCCeEEE-EEEeCceeecCCceeEeeCCCCCCCCC
Q 031020 6 TDFLISLD---DRFLYFSNWL------------HGDIRQYNIEDPKNPVLTG-QIWVGGLFRKGSPVVAVTDDGQPYQSD 69 (167)
Q Consensus 6 tdI~IS~D---dRfLYVSnw~------------hg~I~qyDIsdp~~pklvg-~v~~GG~~~~~~~v~v~~~~~~~~~p~ 69 (167)
-+|+++|| +++|||+.-. ...|.+|+.++ ...++.. ++-+-+ .|.
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~-~~~~~~~~~~i~~~------------------~p~ 140 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNK-STDTLEKPVDLLAG------------------LPS 140 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEET-TTTEEEEEEEEEEE------------------ECC
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECC-CCCCcCCcEEEEEc------------------CCC
Confidence 38999999 9999999853 45788888764 2333321 111100 010
Q ss_pred CccccCccCCCCCceEEEccCCCEEEEEe
Q 031020 70 VPEVQGHRLRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 70 ~~~~~g~~~~g~P~~~~LS~DGkrLyVaN 98 (167)
.+.| .+..|.+++||+ ||||.
T Consensus 141 ----~~~H---~~~~l~f~pDG~-Lyv~~ 161 (454)
T 1cru_A 141 ----SKDH---QSGRLVIGPDQK-IYYTI 161 (454)
T ss_dssp ----CSSC---CEEEEEECTTSC-EEEEE
T ss_pred ----CCCC---CCCeEeECCCCe-EEEEE
Confidence 0112 489999999996 99985
No 203
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.62 E-value=0.11 Score=41.29 Aligned_cols=60 Identities=13% Similarity=0.276 Sum_probs=43.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.+.++.+|+|+++|..+. ..+.|+.||+.. .+...++. | ..+.-.
T Consensus 78 ~V~~~~~~~~~~~l~s~s-~D~~v~lwd~~~---~~~~~~~~--~-----------------------------h~~~v~ 122 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSS-WDKTLRLWDLRT---GTTYKRFV--G-----------------------------HQSEVY 122 (343)
T ss_dssp CEEEEEECSSTTEEEEEE-TTSEEEEEETTS---SCEEEEEE--C-----------------------------CCSCEE
T ss_pred ceEEEEECCCCCEEEEEc-CCCcEEEEECCC---CcEEEEEc--C-----------------------------CCCcEE
Confidence 478899999999987555 578999999875 33333322 1 012256
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|+.+.
T Consensus 123 ~v~~sp~~~~l~s~~ 137 (343)
T 2xzm_R 123 SVAFSPDNRQILSAG 137 (343)
T ss_dssp EEEECSSTTEEEEEE
T ss_pred EEEECCCCCEEEEEc
Confidence 789999999998876
No 204
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.60 E-value=0.06 Score=45.07 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=43.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+-++.+++|||+++|..+. ..+.|++||++. ++...+. | ..+..
T Consensus 58 ~~V~~l~fspdg~~las~~-~d~~i~vWd~~~----~~~~~~~--~-----------------------------~~~~v 101 (577)
T 2ymu_A 58 SSVWGVAFSPDGQTIASAS-DDKTVKLWNRNG----QLLQTLT--G-----------------------------HSSSV 101 (577)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTS----CEEEEEC--C-----------------------------CSSCE
T ss_pred CCEEEEEECCCCCEEEEEe-CCCEEEEEECCC----CEEEEEE--C-----------------------------CCCCE
Confidence 3578999999999997655 578999999652 3333221 1 11236
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
+.+++||||++|..+.
T Consensus 102 ~~~~~s~d~~~l~~~~ 117 (577)
T 2ymu_A 102 RGVAFSPDGQTIASAS 117 (577)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEc
Confidence 7899999999998775
No 205
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.57 E-value=0.098 Score=43.63 Aligned_cols=65 Identities=12% Similarity=0.026 Sum_probs=45.5
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+..+.+|+|++++.+++-..+.|+.||+.. .++...+..... ++. ..
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~~~~~~------------------------~~~----~v 209 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASDRTHHK------------------------QGS----FV 209 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEEEEEECSSSC------------------------TTC----CE
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cceeeeecccCC------------------------CCc----eE
Confidence 35788999999997777777889999999654 444443321000 000 26
Q ss_pred ceEEEccC-CCEEEEEe
Q 031020 83 QMIQLSLD-GKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~D-GkrLyVaN 98 (167)
..+++++| |++|+++.
T Consensus 210 ~~~~~~~~~~~~l~~~~ 226 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVG 226 (615)
T ss_dssp EEEEECSTTCCEEEEEE
T ss_pred EEEEECCCCCCEEEEEe
Confidence 77899999 99999887
No 206
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.55 E-value=0.089 Score=46.08 Aligned_cols=62 Identities=6% Similarity=-0.082 Sum_probs=46.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+-++.+.+|+|+++|.++.. .|.|++||+.. .+.+.++... .+..
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~---~~~~~~~~~~-------------------------------~~~v 100 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSD-DFRIRVFNYNT---GEKVVDFEAH-------------------------------PDYI 100 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEET-TSEEEEEETTT---CCEEEEEECC-------------------------------SSCE
T ss_pred CcEEEEEEeCCCCEEEEEeC-CCeEEEEECCC---CcEEEEEecC-------------------------------CCCE
Confidence 45789999999999987765 89999999875 3444333211 1237
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
..+++|+||++|+++..
T Consensus 101 ~~~~~s~~~~~l~~~~~ 117 (814)
T 3mkq_A 101 RSIAVHPTKPYVLSGSD 117 (814)
T ss_dssp EEEEECSSSSEEEEEET
T ss_pred EEEEEeCCCCEEEEEcC
Confidence 78999999999988763
No 207
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.51 E-value=0.21 Score=40.52 Aligned_cols=67 Identities=12% Similarity=0.031 Sum_probs=43.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..|.+|||+++|. |+-..+.|+.||+.. .+......... .. .........
T Consensus 251 ~v~~v~~~p~~~~l~-s~s~D~~i~lwd~~~---~~~~~~~~~~~--------------------~~----~~~~~~~v~ 302 (380)
T 3iz6_a 251 DINSVKFFPDGQRFG-TGSDDGTCRLFDMRT---GHQLQVYNREP--------------------DR----NDNELPIVT 302 (380)
T ss_dssp CCCEEEECTTSSEEE-EECSSSCEEEEETTT---TEEEEEECCCC--------------------SS----SCCSSCSCS
T ss_pred CeEEEEEecCCCeEE-EEcCCCeEEEEECCC---CcEEEEecccc--------------------cc----cccccCceE
Confidence 467899999999885 555689999999875 33332221110 00 000011246
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++|++|++|+++.
T Consensus 303 ~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 303 SVAFSISGRLLFAGY 317 (380)
T ss_dssp EEEECSSSSEEEEEC
T ss_pred EEEECCCCCEEEEEE
Confidence 789999999999987
No 208
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.51 E-value=0.11 Score=40.59 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=51.3
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeE-E--------------------EEEEeCceeecCCceeEeeC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVL-T--------------------GQIWVGGLFRKGSPVVAVTD 61 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pkl-v--------------------g~v~~GG~~~~~~~v~v~~~ 61 (167)
..++.|.+|+|+++|++++ ..+.|++||+........ . ..+.++ ..++.|+|..-
T Consensus 246 ~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~d~ 321 (408)
T 4a11_B 246 GKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV---PYGSTIAVYTV 321 (408)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE---EETTEEEEEET
T ss_pred CceeEEEEcCCCCEEEEec-CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE---ecCCEEEEEEC
Confidence 3478999999999998776 578999999986332110 0 011111 12234444443
Q ss_pred CCCCCCCCCccccCccCCCCCceEEEccCCCEEEEEe
Q 031020 62 DGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 62 ~~~~~~p~~~~~~g~~~~g~P~~~~LS~DGkrLyVaN 98 (167)
..... ....+|. .+....+++|+||++|+.+.
T Consensus 322 ~~~~~---~~~~~~~--~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 322 YSGEQ---ITMLKGH--YKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp TTCCE---EEEECCC--SSCEEEEEEETTTTEEEEEE
T ss_pred cCCcc---eeeeccC--CCeEEEEEEcCCCCEEEEEC
Confidence 22111 1112221 23467899999999999887
No 209
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.026 Score=44.75 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=42.4
Q ss_pred CceeEEEEecCCCEEEEEeCCCC---cEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHG---DIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg---~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
..++.|.+|+|++.+++++-..+ .|++||+.....+... +.. + ..
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~--~~~-~-----------------------------~~ 262 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT--LNQ-G-----------------------------HQ 262 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC--CCS-C-----------------------------CS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE--eec-C-----------------------------cc
Confidence 45789999999965556665666 9999998863222110 100 0 11
Q ss_pred CCCceEEEcc-CCCEEEEEe
Q 031020 80 GGPQMIQLSL-DGKRLYVTN 98 (167)
Q Consensus 80 g~P~~~~LS~-DGkrLyVaN 98 (167)
+....+++|| ||++|+++.
T Consensus 263 ~~v~~~~~s~~~~~~l~s~~ 282 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLLLSSG 282 (416)
T ss_dssp SCEEEEEECSSCSSCEEEEE
T ss_pred CceeEEEeCCCCCCeEEEEe
Confidence 2367889999 888888876
No 210
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.47 E-value=0.093 Score=48.82 Aligned_cols=61 Identities=10% Similarity=-0.007 Sum_probs=45.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
..++.+.+|+|+++|..+. ..|.|++||+.. .+.+.++. | ..+..
T Consensus 616 ~~v~~~~~s~~~~~l~s~~-~d~~i~vw~~~~---~~~~~~~~--~-----------------------------h~~~v 660 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCG-ADKTLQVFKAET---GEKLLDIK--A-----------------------------HEDEV 660 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTT---CCEEEEEC--C-----------------------------CSSCE
T ss_pred ccEEEEEECCCCCEEEEEe-CCCeEEEEECCC---CCEEEEec--c-----------------------------CCCCE
Confidence 4578999999999996655 678999999865 33443332 1 12236
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++|+||++|.++.
T Consensus 661 ~~~~~s~~~~~l~s~~ 676 (1249)
T 3sfz_A 661 LCCAFSSDDSYIATCS 676 (1249)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEEecCCCEEEEEe
Confidence 7899999999999886
No 211
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.47 E-value=0.03 Score=45.54 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=26.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
..++.+.+|||+..+.++.-..+.|+.||+..
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCC
Confidence 45788999999877767766788999999875
No 212
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.40 E-value=0.17 Score=41.35 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=42.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|+|+++|+.+. ..+.|+.||+.. .+....+...+ +..
T Consensus 167 ~v~~~~~~p~~~~l~s~s-~d~~v~iwd~~~---~~~~~~~~~~~--------------------------------~v~ 210 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGS-GDRTVRIWDLRT---GQCSLTLSIED--------------------------------GVT 210 (393)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTT---TEEEEEEECSS--------------------------------CEE
T ss_pred CEEEEEEcCCCCEEEEec-CCCcEEEEECCC---CeeEEEEEcCC--------------------------------CcE
Confidence 478899999999996555 578999999865 34333332211 266
Q ss_pred eEEEcc-CCCEEEEEe
Q 031020 84 MIQLSL-DGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~-DGkrLyVaN 98 (167)
.+++++ ||++|.++.
T Consensus 211 ~~~~~~~~~~~l~~~s 226 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGS 226 (393)
T ss_dssp EEEECSTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEEc
Confidence 788888 888887765
No 213
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.39 E-value=0.074 Score=40.92 Aligned_cols=32 Identities=16% Similarity=0.051 Sum_probs=24.9
Q ss_pred CceeEEEEecCCCEEEEEe-C--CCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSN-W--LHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSn-w--~hg~I~qyDIsd 34 (167)
.-+.+|.+|||++.|.++. + ..+.|+.||+..
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~ 53 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH 53 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC
Confidence 3578999999997666554 3 389999999875
No 214
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.38 E-value=0.059 Score=50.19 Aligned_cols=64 Identities=8% Similarity=0.016 Sum_probs=44.1
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+.+..++.||||+.|-++. .+|.|+.||... +..+.. .. ..+..+ .-
T Consensus 86 ~~V~~vawSPdG~~LAs~s-~dg~V~iwd~~~-----~l~~l~-~~----------------------~~~~~~----sv 132 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLS-NNGNVSVFKDNK-----MLTNLD-SK----------------------GNLSSR----TY 132 (588)
T ss_dssp CCEEEEEECSSSSCEEEEE-TTSCEEEEETTE-----EEEECC-CS----------------------SCSTTT----CE
T ss_pred CcEEEEEECCCCCEEEEEe-CCCcEEEEeCCc-----eeeecc-CC----------------------Cccccc----cE
Confidence 4589999999999996655 688999999432 332222 11 001111 25
Q ss_pred ceEEEccCCCEEEEEeC
Q 031020 83 QMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNs 99 (167)
+.+++||||++|++++.
T Consensus 133 ~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 133 HCFEWNPIESSIVVGNE 149 (588)
T ss_dssp EEEEECSSSSCEEEEET
T ss_pred EEEEEcCCCCEEEEEcC
Confidence 68999999999999993
No 215
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.36 E-value=0.11 Score=39.16 Aligned_cols=59 Identities=12% Similarity=0.077 Sum_probs=40.5
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+.++.|.+|+|++ | ++.-..|.|+.||+.. .++...+.... +..
T Consensus 226 ~~i~~~~~~~~~~-l-~~~~~dg~v~iwd~~~---~~~~~~~~~~~-------------------------------~~i 269 (313)
T 3odt_A 226 SFVYCIKLLPNGD-I-VSCGEDRTVRIWSKEN---GSLKQVITLPA-------------------------------ISI 269 (313)
T ss_dssp SCEEEEEECTTSC-E-EEEETTSEEEEECTTT---CCEEEEEECSS-------------------------------SCE
T ss_pred ceEEEEEEecCCC-E-EEEecCCEEEEEECCC---CceeEEEeccC-------------------------------ceE
Confidence 4578999999996 3 3444689999999875 44554443221 126
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||+ |+++.
T Consensus 270 ~~~~~~~~~~-~~~~~ 284 (313)
T 3odt_A 270 WSVDCMSNGD-IIVGS 284 (313)
T ss_dssp EEEEECTTSC-EEEEE
T ss_pred EEEEEccCCC-EEEEe
Confidence 7889999999 44554
No 216
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.33 E-value=0.083 Score=41.63 Aligned_cols=31 Identities=6% Similarity=-0.156 Sum_probs=25.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
..+..|.+|+|+++|..++. .+.|+.||+..
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~ 177 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCA-DRKAYVLSAYV 177 (377)
T ss_dssp SCEEEEEECTTSSEEEEEES-SSCEEEEEECC
T ss_pred CCeEEEEEcCCCCEEEEEeC-CCEEEEEEEEe
Confidence 45789999999999987764 68999999863
No 217
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.28 E-value=0.09 Score=45.32 Aligned_cols=88 Identities=19% Similarity=0.143 Sum_probs=52.5
Q ss_pred eeEEEEecC---CCEEEEEe--CCCCcEEEEeccCCC-------CCe-EEEEEEeCceeecCCceeEeeCCCCCCCCCCc
Q 031020 5 ITDFLISLD---DRFLYFSN--WLHGDIRQYNIEDPK-------NPV-LTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVP 71 (167)
Q Consensus 5 ~tdI~IS~D---dRfLYVSn--w~hg~I~qyDIsdp~-------~pk-lvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~ 71 (167)
+.+|+++|| +++|||+- ...+.|.+|..++.. .++ +...++.+
T Consensus 82 llGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~------------------------ 137 (347)
T 3das_A 82 LLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKG------------------------ 137 (347)
T ss_dssp EEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCC------------------------
T ss_pred ceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCC------------------------
Confidence 468999997 88999962 345788888877411 111 11122211
Q ss_pred cccCccCCCCCceEEEccCCCEEEEEeC-CCccccccccccccccCcEEEEEEeeC
Q 031020 72 EVQGHRLRGGPQMIQLSLDGKRLYVTNS-LFSAWDCQFYPELKEKGSHMLQIDVNS 126 (167)
Q Consensus 72 ~~~g~~~~g~P~~~~LS~DGkrLyVaNs-l~s~wD~Qfyp~~~~~g~~~~~~dvD~ 126 (167)
+.| ....+.+++|| +|||+.- -......|. .-+..+.|+|++.|.
T Consensus 138 ---~~H---~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd---~~~~~G~IlRi~~dG 183 (347)
T 3das_A 138 ---VIH---NGGRIAFGPDK-MLYAGTGESGDTGLSQD---RKSLGGKILRMTPDG 183 (347)
T ss_dssp ---SSC---CCCCEEECTTS-CEEEECBCTTCGGGTTC---TTCSTTCEEEECTTS
T ss_pred ---CCc---cCccccCCCCC-CEEEEECCCCCCccccC---CCCCCCEEEEEeCCC
Confidence 112 37889999999 5999852 111122231 113467899998873
No 218
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.24 E-value=0.035 Score=47.34 Aligned_cols=33 Identities=18% Similarity=0.085 Sum_probs=28.8
Q ss_pred CCceeEEEEecCCCEEEE---EeCCCCcEEEEeccC
Q 031020 2 PGLITDFLISLDDRFLYF---SNWLHGDIRQYNIED 34 (167)
Q Consensus 2 p~l~tdI~IS~DdRfLYV---Snw~hg~I~qyDIsd 34 (167)
++-+..+.+|+|+++|+| |+...+.|++||+..
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~ 127 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRT 127 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHH
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccc
Confidence 345889999999999998 777889999999875
No 219
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.23 E-value=0.16 Score=41.88 Aligned_cols=68 Identities=9% Similarity=-0.012 Sum_probs=46.6
Q ss_pred eEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceE
Q 031020 6 TDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMI 85 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~ 85 (167)
-+|++..+++ +||++-..+.|.+|++.+....+.+.++.++- . -..-..+.+-+
T Consensus 73 EGIa~~~~g~-~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~-~------------------------~~~~N~g~EGL 126 (255)
T 3qqz_A 73 ETIEYIGDNQ-FVISDERDYAIYVISLTPNSEVKILKKIKIPL-Q------------------------ESPTNCGFEGL 126 (255)
T ss_dssp EEEEECSTTE-EEEEETTTTEEEEEEECTTCCEEEEEEEECCC-S------------------------SCCCSSCCEEE
T ss_pred HHeEEeCCCE-EEEEECCCCcEEEEEcCCCCeeeeeeeecccc-c------------------------cccccCCcceE
Confidence 4688888886 66788777899999998644333444444321 0 00113347999
Q ss_pred EEccCCCEEEEEeC
Q 031020 86 QLSLDGKRLYVTNS 99 (167)
Q Consensus 86 ~LS~DGkrLyVaNs 99 (167)
+.+++++|||++++
T Consensus 127 A~d~~~~~L~va~E 140 (255)
T 3qqz_A 127 AYSRQDHTFWFFKE 140 (255)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEEC
Confidence 99999999999995
No 220
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.23 E-value=0.17 Score=41.11 Aligned_cols=64 Identities=20% Similarity=0.260 Sum_probs=44.1
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.++.+.+|+|+++|+... ..|.|++||+.. .+....+. ... + ...+.-.
T Consensus 300 ~v~~~~~s~~g~~l~~g~-~dg~i~vwd~~~---~~~~~~~~--~~~-----------------------~--~h~~~v~ 348 (380)
T 3iz6_a 300 IVTSVAFSISGRLLFAGY-SNGDCYVWDTLL---AEMVLNLG--TLQ-----------------------N--SHEGRIS 348 (380)
T ss_dssp SCSEEEECSSSSEEEEEC-TTSCEEEEETTT---CCEEEEEC--CSC-----------------------S--SCCCCCC
T ss_pred ceEEEEECCCCCEEEEEE-CCCCEEEEECCC---CceEEEEe--ccc-----------------------C--CCCCceE
Confidence 478899999999997665 589999999764 33333221 100 0 0123367
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
-+++||||++|+.+.
T Consensus 349 ~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 349 CLGLSSDGSALCTGS 363 (380)
T ss_dssp EEEECSSSSEEEEEC
T ss_pred EEEECCCCCEEEEee
Confidence 899999999988776
No 221
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.19 E-value=0.071 Score=46.70 Aligned_cols=29 Identities=14% Similarity=-0.045 Sum_probs=23.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
-+..+.+||||++|..+. .+.|+.||+..
T Consensus 111 ~~~~~~~SPDG~~la~~~--~~~i~~~~~~~ 139 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYVY--QNNIYLKQRPG 139 (719)
T ss_dssp SBCCEEECSSTTCEEEEE--TTEEEEESSTT
T ss_pred ccccceECCCCCEEEEEE--CCeEEEEeCCC
Confidence 357799999999987774 57999999864
No 222
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=95.11 E-value=0.15 Score=45.71 Aligned_cols=26 Identities=23% Similarity=0.312 Sum_probs=21.9
Q ss_pred eEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 6 TDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
..+..|+|+++||.+ .+.|+.||+..
T Consensus 20 ~~~~w~~dg~~~~~~---~~~i~~~~~~~ 45 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ---ENNILVFNAEY 45 (740)
T ss_dssp CCEEECSSSEEEEEE---TTEEEEEETTT
T ss_pred cccEECCCCcEEEEc---CCcEEEEECCC
Confidence 467899999988876 78999999874
No 223
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.08 E-value=0.053 Score=42.79 Aligned_cols=65 Identities=11% Similarity=-0.067 Sum_probs=43.2
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+..+.+|+|+++|++++. .+.|+.||+.......+...+. ++ ..+..
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~-~~-----------------------------h~~~v 149 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSG-ARVISVCYFEQENDWWVSKHLK-RP-----------------------------LRSTI 149 (377)
T ss_dssp SCEEEEECCTTSSCCEEEES-SSCEEECCC-----CCCCEEEC-SS-----------------------------CCSCE
T ss_pred CceEEEEECCCCCEEEEEec-CCeEEEEEECCcccceeeeEee-cc-----------------------------cCCCe
Confidence 35788999999999987775 7899999987532222222222 10 12237
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++++||++|+++.
T Consensus 150 ~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 150 LSLDWHPNNVLLAAGC 165 (377)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEe
Confidence 7899999999998887
No 224
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.06 E-value=0.018 Score=53.51 Aligned_cols=59 Identities=20% Similarity=0.305 Sum_probs=42.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+-++.+.+|+|+++|..++ |.|..||+.. .+.+..+...+ +..
T Consensus 1179 ~~v~~l~fs~dg~~l~s~~---g~v~vwd~~~---g~~~~~~~~~~-------------------------------~~i 1221 (1249)
T 3sfz_A 1179 GWVTDVCFSPDSKTLVSAG---GYLKWWNVAT---GDSSQTFYTNG-------------------------------TNL 1221 (1249)
T ss_dssp SCCCEEEECTTSSCEEEES---SSEEEBCSSS---CBCCCCCCCSS-------------------------------CCC
T ss_pred ceEEEEEECCCCCEEEECC---CeEEEEECCC---CceeeeeeccC-------------------------------Ccc
Confidence 3478999999999997774 8999999875 22222222111 126
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++|+||++|+++.
T Consensus 1222 ~~~~~s~dg~~l~~~~ 1237 (1249)
T 3sfz_A 1222 KKIHVSPDFRTYVTVD 1237 (1249)
T ss_dssp CCCEECSSSCCEEEEC
T ss_pred cEEEECCCCCEEEEec
Confidence 7799999999999888
No 225
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.04 E-value=0.19 Score=40.02 Aligned_cols=61 Identities=11% Similarity=0.146 Sum_probs=41.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+..+.+|||+++|..+. ..+.|+.||+.....+. .....++ . .
T Consensus 214 ~~v~~~~~s~~g~~l~sgs-~dg~v~iwd~~~~~~~~--~~~~~~~----------------------------~----v 258 (343)
T 2xzm_R 214 SNVNHLSISPNGKYIATGG-KDKKLLIWDILNLTYPQ--REFDAGS----------------------------T----I 258 (343)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTCEEEEEESSCCSSCS--EEEECSS----------------------------C----E
T ss_pred ccceEEEECCCCCEEEEEc-CCCeEEEEECCCCcccc--eeecCCC----------------------------c----E
Confidence 3478899999999986555 68899999985432221 1121222 1 5
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++||+|+.|.++.
T Consensus 259 ~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 259 NQIAFNPKLQWVAVGT 274 (343)
T ss_dssp EEEEECSSSCEEEEEE
T ss_pred EEEEECCCCCEEEEEC
Confidence 6789999999887655
No 226
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.01 E-value=0.12 Score=41.78 Aligned_cols=59 Identities=15% Similarity=0.230 Sum_probs=43.0
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
++.+.+|+|+++|+++. ..+.|++||+.. .+.+..+. | ..+....
T Consensus 287 ~~~~~~s~~g~~l~~g~-~d~~i~vwd~~~---~~~~~~l~--~-----------------------------h~~~v~~ 331 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGY-NDYTINVWDVLK---GSRVSILF--G-----------------------------HENRVST 331 (354)
T ss_dssp EEEEEECTTSSEEEEEE-TTSCEEEEETTT---CSEEEEEC--C-----------------------------CSSCEEE
T ss_pred eeEEEEeCCCCEEEEEE-CCCcEEEEECCC---CceEEEEE--C-----------------------------CCCcEEE
Confidence 57899999999998776 578999999864 33333221 2 1123677
Q ss_pred EEEccCCCEEEEEe
Q 031020 85 IQLSLDGKRLYVTN 98 (167)
Q Consensus 85 ~~LS~DGkrLyVaN 98 (167)
+++||||++|..+.
T Consensus 332 l~~spdg~~l~sgs 345 (354)
T 2pbi_B 332 LRVSPDGTAFCSGS 345 (354)
T ss_dssp EEECTTSSCEEEEE
T ss_pred EEECCCCCEEEEEc
Confidence 89999999988876
No 227
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.96 E-value=0.18 Score=37.90 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=27.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEE
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQI 44 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v 44 (167)
..++.+.+|++++ | +++-..+.|+.||+.. .+.+.++
T Consensus 185 ~~i~~~~~~~~~~-~-~~~~~dg~i~i~d~~~---~~~~~~~ 221 (313)
T 3odt_A 185 DVVRHLAVVDDGH-F-ISCSNDGLIKLVDMHT---GDVLRTY 221 (313)
T ss_dssp SCEEEEEEEETTE-E-EEEETTSEEEEEETTT---CCEEEEE
T ss_pred ccEEEEEEcCCCe-E-EEccCCCeEEEEECCc---hhhhhhh
Confidence 4578999999999 3 4555688999999875 4444444
No 228
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=94.94 E-value=0.045 Score=46.92 Aligned_cols=31 Identities=13% Similarity=-0.042 Sum_probs=24.2
Q ss_pred CceeEEEEecCCCEEEEEeCCCC--cEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHG--DIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg--~I~qyDIsd 34 (167)
+.+..+.+|||||+||.|.. .+ .|+.||+..
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~-~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLET-AREARLVTVDPRD 227 (582)
T ss_dssp CEEEEEEECTTSCEEEEEEC-SSCEEEEEECTTT
T ss_pred CccccceECCCCCEEEEccC-CCeeEEEEEcCCC
Confidence 34678999999999996554 55 799998763
No 229
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.92 E-value=0.36 Score=38.36 Aligned_cols=30 Identities=10% Similarity=0.159 Sum_probs=24.0
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
-+..|.+|||+++|..+.+ .+.|+.||+..
T Consensus 60 ~v~~v~~sp~~~~las~s~-D~~v~iw~~~~ 89 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSF-DSTVSIWAKEE 89 (330)
T ss_dssp CEEEEEECTTSSEEEEEET-TSCEEEEEC--
T ss_pred CEEEEEECCCCCEEEEEeC-CCcEEEEEccc
Confidence 4788999999999877764 78999999864
No 230
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.91 E-value=0.074 Score=45.27 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=43.6
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+.+|..||++..+++|+-..|.|+.||+... +..-. ..+ ......
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~---~~~~~-~~~------------------------------~~~~v~ 196 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTET---VKVCA-TLP------------------------------STVAVT 196 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSS---EEEEE-EEC------------------------------GGGCEE
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCC---cceee-ccC------------------------------CCCcee
Confidence 47899999996666677767899999998752 22111 111 011278
Q ss_pred eEEEccCCCEEEEEeC
Q 031020 84 MIQLSLDGKRLYVTNS 99 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNs 99 (167)
.+++||||++|++++.
T Consensus 197 ~v~wspdg~~lasgs~ 212 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQ 212 (434)
T ss_dssp EEEECTTSSCEEEEET
T ss_pred EEEEcCCCCEEEEEcC
Confidence 8999999999999874
No 231
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.90 E-value=0.39 Score=36.32 Aligned_cols=56 Identities=9% Similarity=-0.019 Sum_probs=38.9
Q ss_pred EEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEE
Q 031020 8 FLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQL 87 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~L 87 (167)
|.-|+++ .|-|+. .+.|+.||+.. .++...+...+ ..+.-..+++
T Consensus 31 l~WS~~~-~lAvg~--D~tV~iWd~~t---g~~~~~~~~~~-----------------------------~~~~V~~v~~ 75 (318)
T 4ggc_A 31 VDWSSGN-VLAVAL--DNSVYLWSASS---GDILQLLQMEQ-----------------------------PGEYISSVAW 75 (318)
T ss_dssp EEECTTS-EEEEEE--TTEEEEEETTT---CCEEEEEECCS-----------------------------TTCCEEEEEE
T ss_pred EEECCCC-EEEEEe--CCEEEEEECCC---CCEEEEEEecC-----------------------------CCCeEEEEEE
Confidence 6789886 676664 78999999764 55555554333 0111467889
Q ss_pred ccCCCEEEEEe
Q 031020 88 SLDGKRLYVTN 98 (167)
Q Consensus 88 S~DGkrLyVaN 98 (167)
+++|++|..+.
T Consensus 76 ~~~~~~l~sgs 86 (318)
T 4ggc_A 76 IKEGNYLAVGT 86 (318)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99999998876
No 232
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.86 E-value=0.086 Score=45.44 Aligned_cols=65 Identities=18% Similarity=0.124 Sum_probs=43.1
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
+..|++.+||+ |||+.+..|.|+.++-.+ .....+..++ + ....| .++|-.
T Consensus 34 P~~ia~~pdG~-llVter~~G~I~~v~~~~-g~~~~v~~~~-----------------------~-v~~~g---~~GllG 84 (347)
T 3das_A 34 PWGLAPLPGGD-LLVSSRDEATITRVDAKT-GRKTELGEVP-----------------------G-VSPSG---EGGLLG 84 (347)
T ss_dssp EEEEEECTTSC-EEEEETTTCEEEEECTTT-CCEEEEEECT-----------------------T-CCCBT---TBSEEE
T ss_pred ceEEEEcCCCc-EEEEEecCCEEEEEECCC-CcEeeecccC-----------------------c-eeecC---CCCcee
Confidence 56899999998 889999889999887332 1111121111 0 01111 346999
Q ss_pred EEEccC---CCEEEEEe
Q 031020 85 IQLSLD---GKRLYVTN 98 (167)
Q Consensus 85 ~~LS~D---GkrLyVaN 98 (167)
|+++|| .++|||+.
T Consensus 85 ia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 85 IALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEECTTHHHHCEEEEEE
T ss_pred eEeccccccCCEEEEEE
Confidence 999997 78999975
No 233
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.85 E-value=0.038 Score=45.68 Aligned_cols=31 Identities=3% Similarity=0.155 Sum_probs=27.0
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
-++.|.+||+++.+.+++-..+.|+.||+..
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred eEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 4788999999998888887889999999875
No 234
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.84 E-value=0.36 Score=38.35 Aligned_cols=63 Identities=6% Similarity=-0.011 Sum_probs=42.4
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCC-CCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPK-NPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~-~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
-+..+.+|||+++|..+. ..+.|+.||+.... ..+....+. + ..+.-
T Consensus 109 ~V~~v~~sp~g~~las~s-~D~~v~iwd~~~~~~~~~~~~~~~--~-----------------------------h~~~v 156 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCS-RDKSVWIWETDESGEEYECISVLQ--E-----------------------------HSQDV 156 (330)
T ss_dssp CEEEEEECTTSCEEEEEE-TTSCEEEEECCTTCCCCEEEEEEC--C-----------------------------CSSCE
T ss_pred cEEEEEECCCCCEEEEEe-CCCEEEEEeccCCCCCeEEEEEec--c-----------------------------CCCce
Confidence 467899999999986655 57899999995432 223332221 1 11226
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..++++|||++|..+.
T Consensus 157 ~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 157 KHVIWHPSEALLASSS 172 (330)
T ss_dssp EEEEECSSSSEEEEEE
T ss_pred EEEEECCCCCEEEEEc
Confidence 6788999999887765
No 235
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.84 E-value=0.11 Score=41.77 Aligned_cols=27 Identities=7% Similarity=0.123 Sum_probs=23.1
Q ss_pred EEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 7 DFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.+.+|+|+++| ++.-..|.|+.||+..
T Consensus 347 ~~~~s~~~~~l-~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 347 ECCWNGSDSVV-MTGSYNNFFRMFDRNT 373 (447)
T ss_dssp CEEECTTSSEE-EEECSTTEEEEEETTT
T ss_pred EEEECCCCCEE-EEeccCCEEEEEEcCC
Confidence 48999999999 5566789999999875
No 236
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.80 E-value=0.41 Score=35.84 Aligned_cols=32 Identities=6% Similarity=0.108 Sum_probs=26.0
Q ss_pred CceeEEEEec--CCCEEEEEeCCCCcEEEEeccCC
Q 031020 3 GLITDFLISL--DDRFLYFSNWLHGDIRQYNIEDP 35 (167)
Q Consensus 3 ~l~tdI~IS~--DdRfLYVSnw~hg~I~qyDIsdp 35 (167)
.-++.|.+++ |+++|+.+.. .+.|++||+...
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~-dg~v~vwd~~~~ 91 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASY-DKTVKLWEEDPD 91 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEET-TSCEEEEEECTT
T ss_pred CcEEEEEEcCCCCCCEEEEEcC-CCeEEEEecCCC
Confidence 3578999999 6888877765 789999999863
No 237
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.80 E-value=0.21 Score=39.48 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=42.2
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEE-eCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIW-VGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~-~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
+-++.+.+|+++..+.+|+-..+.|+.|++.... .+..-.+. .-| ..+.
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~-~~~~~~~~~~~~-----------------------------h~~~ 67 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDD-QKFGVPVRSFKG-----------------------------HSHI 67 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEET-TEEEEEEEEEEC-----------------------------CSSC
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCC-ccccccceEEeC-----------------------------Cccc
Confidence 3478899999875445666678999999987422 11110110 111 1123
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
-..+++|+||++|+.+.
T Consensus 68 v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 68 VQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 56788999999998876
No 238
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.77 E-value=0.22 Score=43.87 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=45.2
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCe-EEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPV-LTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pk-lvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
..++.|.+|+++.-+.+|+-..+.|+.||++...... ...+... | ..+.
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~-~-----------------------------h~~~ 432 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-G-----------------------------HSHF 432 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE-C-----------------------------CSSC
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec-C-----------------------------CCCc
Confidence 3578999999987777888789999999998533221 1111111 2 1123
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
-..+++|+||++|..+.
T Consensus 433 v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGS 449 (694)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 56789999999998876
No 239
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.69 E-value=0.25 Score=40.00 Aligned_cols=63 Identities=14% Similarity=0.066 Sum_probs=43.5
Q ss_pred CceeEEEEec-CCCEEEEEeCCCCcEEEEeccCCCC---CeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccC
Q 031020 3 GLITDFLISL-DDRFLYFSNWLHGDIRQYNIEDPKN---PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 78 (167)
Q Consensus 3 ~l~tdI~IS~-DdRfLYVSnw~hg~I~qyDIsdp~~---pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~ 78 (167)
+-++.|.+|+ |+++|..+. ..+.|++||+..... .+..-... .
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~--------------------------------h 110 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGS-DQGVIKIWNLKEIIVGEVYSSSLTYD--------------------------------C 110 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEE-TTSEEEEEEHHHHHTTCCCSCSEEEE--------------------------------C
T ss_pred CceEEEEECCCCCCEEEEec-CCceEEEeECcccccCcccceeeecc--------------------------------C
Confidence 4689999999 999886655 678999999875111 11111111 1
Q ss_pred CCCCceEEEccCCCEEEEEe
Q 031020 79 RGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 79 ~g~P~~~~LS~DGkrLyVaN 98 (167)
.+....++++++|++|+++.
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEe
Confidence 12367899999999999887
No 240
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.62 E-value=0.16 Score=44.74 Aligned_cols=60 Identities=10% Similarity=0.086 Sum_probs=42.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+.++.|.+|+|+++|..++ ..+.|+.||+.. .+.+.++... ...
T Consensus 562 ~~v~~v~~spdg~~l~sg~-~Dg~i~iwd~~~---~~~~~~~~~~--------------------------------~~v 605 (694)
T 3dm0_A 562 GYVSTVAVSPDGSLCASGG-KDGVVLLWDLAE---GKKLYSLEAN--------------------------------SVI 605 (694)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSBCEEEETTT---TEEEECCBCS--------------------------------SCE
T ss_pred CCEEEEEEeCCCCEEEEEe-CCCeEEEEECCC---CceEEEecCC--------------------------------CcE
Confidence 4578999999999886555 588999999875 3333222111 125
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..+++|+||++|.++.
T Consensus 606 ~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 606 HALCFSPNRYWLCAAT 621 (694)
T ss_dssp EEEEECSSSSEEEEEE
T ss_pred EEEEEcCCCcEEEEEc
Confidence 6789999999988776
No 241
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.51 E-value=0.4 Score=39.51 Aligned_cols=60 Identities=12% Similarity=0.157 Sum_probs=43.4
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
.++.+.++||+++|+.+. .++.|+.||+.. .+.+..+. |- ...-+
T Consensus 194 ~V~~v~~~p~~~~l~s~s-~D~~i~~wd~~~---~~~~~~~~-~h------------------------------~~~v~ 238 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSAS-RDKTIKMWEVQT---GYCVKTFT-GH------------------------------REWVR 238 (410)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSEEEEEETTT---CCEEEEEE-CC------------------------------SSCEE
T ss_pred CEEEEEEeCCCCEEEEEe-CCCeEEEEECCC---CcEEEEEe-CC------------------------------CccEE
Confidence 578899999999986665 578999999875 33333322 11 12367
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+.+++||++|+.+.
T Consensus 239 ~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 239 MVRPNQDGTLIASCS 253 (410)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEc
Confidence 788999999888876
No 242
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=94.49 E-value=0.073 Score=41.58 Aligned_cols=18 Identities=22% Similarity=0.268 Sum_probs=14.9
Q ss_pred eeEEEEecCCCEEEEEeC
Q 031020 5 ITDFLISLDDRFLYFSNW 22 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw 22 (167)
+..+..|||+++|+++..
T Consensus 106 ~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp EEEEEECTTSSEEEEEEE
T ss_pred ccceeECCCCCEEEEEEc
Confidence 578899999998888753
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.46 E-value=0.16 Score=46.55 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=21.8
Q ss_pred eeEEEEe-cCCCEEEEEeCCCCc----EEEEeccC
Q 031020 5 ITDFLIS-LDDRFLYFSNWLHGD----IRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS-~DdRfLYVSnw~hg~----I~qyDIsd 34 (167)
+....+| |||++|.++....|+ |+++|+..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~ 210 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISD 210 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTC
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCC
Confidence 5678999 999977655544333 88888764
No 244
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.31 E-value=0.17 Score=41.56 Aligned_cols=56 Identities=14% Similarity=-0.031 Sum_probs=37.8
Q ss_pred EEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEc
Q 031020 9 LISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLS 88 (167)
Q Consensus 9 ~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS 88 (167)
...+.++.+.++.-.+|.|+.||++.. +.......++ ..-+.+++|
T Consensus 323 ~~~~~~~~~~~sgs~Dg~V~lwd~~~~---~~~~~~~~~~-------------------------------~~V~svafs 368 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGLIQLINTYEK---DSNSIPIQLG-------------------------------MPIVDFCWH 368 (393)
T ss_dssp ECSSCTTEEEEEETTTTEEEEEETTCT---TCCEEEEECS-------------------------------SCEEEEEEC
T ss_pred EccCCCCEEEEEECCCCEEEEEECCCC---cEEEEecCCC-------------------------------CcEEEEEEc
Confidence 334556677778777899999998753 2222222111 115789999
Q ss_pred cCCCEEEEEe
Q 031020 89 LDGKRLYVTN 98 (167)
Q Consensus 89 ~DGkrLyVaN 98 (167)
|||++|.++.
T Consensus 369 pdG~~LA~as 378 (393)
T 4gq1_A 369 QDGSHLAIAT 378 (393)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999999987
No 245
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.21 Score=40.44 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=32.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCc
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGG 48 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG 48 (167)
..++.+.+|+|+++|+.+.. .|.|+.||+.. .+.+..+..++
T Consensus 215 ~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~---~~~~~~~~~~~ 256 (437)
T 3gre_A 215 GAVSSICIDEECCVLILGTT-RGIIDIWDIRF---NVLIRSWSFGD 256 (437)
T ss_dssp CCEEEEEECTTSCEEEEEET-TSCEEEEETTT---TEEEEEEBCTT
T ss_pred CceEEEEECCCCCEEEEEcC-CCeEEEEEcCC---ccEEEEEecCC
Confidence 45789999999999987774 68999999874 55665554443
No 246
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.26 E-value=0.54 Score=36.63 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=42.2
Q ss_pred ceeEEEEecCC--CEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCC
Q 031020 4 LITDFLISLDD--RFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGG 81 (167)
Q Consensus 4 l~tdI~IS~Dd--RfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~ 81 (167)
.+.+|.+|||+ ..+.+|+-..+.|+.||+.....+... ++.... ...+.
T Consensus 206 ~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~-~~~~~~----------------------------~~~~~ 256 (297)
T 2pm7_B 206 WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKK-TLLKEE----------------------------KFPDV 256 (297)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE-EESSSS----------------------------CCSSC
T ss_pred ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccce-eeeecc----------------------------cCCCc
Confidence 47889999996 345567667899999998753222111 110000 11223
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
-..+++||||++|..+.
T Consensus 257 v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 257 LWRASWSLSGNVLALSG 273 (297)
T ss_dssp EEEEEECSSSCCEEEEE
T ss_pred EEEEEECCCCCEEEEEc
Confidence 56788999999998877
No 247
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.21 E-value=1.1 Score=34.54 Aligned_cols=32 Identities=3% Similarity=-0.036 Sum_probs=25.3
Q ss_pred CceeEEEEec-------------CCCEEEEEeCCCCcEEEEeccCC
Q 031020 3 GLITDFLISL-------------DDRFLYFSNWLHGDIRQYNIEDP 35 (167)
Q Consensus 3 ~l~tdI~IS~-------------DdRfLYVSnw~hg~I~qyDIsdp 35 (167)
.-+..+.++| |+++|+++. ..+.|+.||+...
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~ 192 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSD 192 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEE-TTSCEEEEEEETT
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEe-CCCeEEEEEecCC
Confidence 3467888999 688887766 4789999999853
No 248
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.19 E-value=0.22 Score=40.23 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=27.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDP 35 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp 35 (167)
+-+..+.+|||+++|..+. ..+.|+.||+.++
T Consensus 241 ~~v~~~~~s~~~~~l~s~s-~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVS-DKWTLHVFEIFND 272 (355)
T ss_dssp SCEEEEEECTTSCEEEEEE-TTCEEEEEESSCC
T ss_pred CcEEEEEECCCCCEEEEEE-CCCEEEEEEccCC
Confidence 4578999999999997666 4689999999864
No 249
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.86 E-value=0.44 Score=44.62 Aligned_cols=83 Identities=11% Similarity=0.079 Sum_probs=53.5
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
+-++.+++|||| +|-++. .++.|+.||+.. ++++-+..+-+ +. +| ..++.
T Consensus 576 ~~V~svafSpdG-~lAsgs-~D~tv~lwd~~~---~~~~~~~~~~~-~~----------------------~g--h~~~V 625 (902)
T 2oaj_A 576 GKTSAINNSNIG-FVGIAY-AAGSLMLIDRRG---PAIIYMENIRE-IS----------------------GA--QSACV 625 (902)
T ss_dssp CSEEEEEECBTS-EEEEEE-TTSEEEEEETTT---TEEEEEEEGGG-TC----------------------SS--CCCCE
T ss_pred CcEEEEEecCCc-EEEEEe-CCCcEEEEECCC---CeEEEEeehhH-hc----------------------cc--cccce
Confidence 457899999999 775555 578999999765 55543212110 00 01 13447
Q ss_pred ceEEEc-----cCC---CEEEEEeCCCccccccccccccccCcEEEEEEeeCC-CCCe
Q 031020 83 QMIQLS-----LDG---KRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSE-KGGM 131 (167)
Q Consensus 83 ~~~~LS-----~DG---krLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~-~G~l 131 (167)
..+++| +|| ++|+++. +.+++...|++|. +|+.
T Consensus 626 ~sv~Fs~~~~~~Dg~~~~~l~sgs----------------~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 626 TCIEFVIMEYGDDGYSSILMVCGT----------------DMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEEEEEECTTSSSEEEEEEEEE----------------TTSEEEEEEEEECGGGCE
T ss_pred EEEEEEEEecCCCCCcceEEEEEe----------------cCCcEEEEEEecCCCCcE
Confidence 889999 886 7888776 2456666888664 5553
No 250
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.78 E-value=0.65 Score=37.95 Aligned_cols=30 Identities=7% Similarity=0.292 Sum_probs=25.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.++.|.+|+||++|.+.. ..+.|+.||+..
T Consensus 149 ~V~sv~fspdg~~lasgs-~Dg~v~iWd~~~ 178 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGT-SSAEVQLWDVQQ 178 (420)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEETTT
T ss_pred cEEEEEECCCCCEEEEEE-CCCeEEEEEcCC
Confidence 589999999999997665 578999999875
No 251
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=93.78 E-value=0.25 Score=40.55 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=24.3
Q ss_pred ceeEEEEec--------CCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISL--------DDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~--------DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.+.+|.+|| |+++| +|+-..+.|++||+..
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~l-as~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVI-ASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEE-EEEETTSEEEEEEEET
T ss_pred ceEEEEEccccccccCCCCCEE-EEEECCCeEEEEECCC
Confidence 477899987 77766 6776789999999875
No 252
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.77 E-value=0.29 Score=40.33 Aligned_cols=61 Identities=8% Similarity=0.151 Sum_probs=41.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.-+.+|.+|+|+++|..+. ..+.|+.||+.. .+....+. | ..+.-
T Consensus 151 ~~V~~v~~~~~~~~l~sgs-~D~~i~iwd~~~---~~~~~~~~--~-----------------------------h~~~V 195 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCS-ADMTIKLWDFQG---FECIRTMH--G-----------------------------HDHNV 195 (410)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCCCEEETTS---SCEEECCC--C-----------------------------CSSCE
T ss_pred CcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCC---CceeEEEc--C-----------------------------CCCCE
Confidence 3578999999999886555 578999999864 22222211 1 01225
Q ss_pred ceEEEccCCCEEEEEe
Q 031020 83 QMIQLSLDGKRLYVTN 98 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaN 98 (167)
..++++|+|++|+.+.
T Consensus 196 ~~v~~~p~~~~l~s~s 211 (410)
T 1vyh_C 196 SSVSIMPNGDHIVSAS 211 (410)
T ss_dssp EEEEECSSSSEEEEEE
T ss_pred EEEEEeCCCCEEEEEe
Confidence 6788999999988775
No 253
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=93.69 E-value=0.35 Score=43.03 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=25.2
Q ss_pred CceeEEEEecCCCEEEEEeC-C---CCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNW-L---HGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw-~---hg~I~qyDIsd 34 (167)
.....+.+|+|||+|+++.+ . ..+|+.+|+..
T Consensus 233 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 233 KWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp TCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred eEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 34678899999999988765 2 46899999874
No 254
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.63 E-value=0.29 Score=43.32 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=27.0
Q ss_pred CceEEEccCCCEEEEEeCCCcc-----ccccccccccccCcEEEEEEeeC
Q 031020 82 PQMIQLSLDGKRLYVTNSLFSA-----WDCQFYPELKEKGSHMLQIDVNS 126 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNsl~s~-----wD~Qfyp~~~~~g~~~~~~dvD~ 126 (167)
-..|.++||| +|||+.-=-.. -+.| ++-...+.|+|||+|.
T Consensus 141 g~~l~fgpDG-~LYv~~Gd~~~~~~~~~~~q---~~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 141 GGQLLFGPDG-FLYIILGDGMITLDDMEEMD---GLSDFTGSVLRLDVDT 186 (463)
T ss_dssp EEEEEECTTS-CEEEEECCTTCCHHHHHHCT---TCCSCTTEEEEEBCCC
T ss_pred CCcEeECCCC-cEEEEeCCCCCCCCcccccc---CcCCCCeeEEEEECCC
Confidence 5789999999 69998642211 0122 2223467899999986
No 255
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.39 E-value=0.45 Score=44.31 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=26.8
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.+.++++||||++|++++. .|.|+.||+.+
T Consensus 131 sv~svafSPDG~~LAsgs~-DGtVkIWd~~~ 160 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNE-DGELQFFSIRK 160 (588)
T ss_dssp CEEEEEECSSSSCEEEEET-TSEEEEEECCC
T ss_pred cEEEEEEcCCCCEEEEEcC-CCEEEEEECCC
Confidence 3678999999999999985 78999999886
No 256
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.33 E-value=1.1 Score=34.89 Aligned_cols=31 Identities=13% Similarity=0.259 Sum_probs=26.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
..+.++++|+|+++|..+. ..+.|++||+..
T Consensus 10 ~~V~~~~~s~~g~~las~s-~D~~v~iw~~~~ 40 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCS-SDKTIKIFEVEG 40 (297)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEEBCS
T ss_pred CceEEEEECCCCCEEEEEe-CCCEEEEEecCC
Confidence 3578999999999997666 578999999874
No 257
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=93.30 E-value=0.36 Score=43.25 Aligned_cols=31 Identities=10% Similarity=0.217 Sum_probs=22.9
Q ss_pred ceeEEEEecCCC-EEEEEeCCCC--cEEEEeccC
Q 031020 4 LITDFLISLDDR-FLYFSNWLHG--DIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdR-fLYVSnw~hg--~I~qyDIsd 34 (167)
.++.+..||||| .++++++..+ .|+.+|+..
T Consensus 261 ~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 261 YLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp EEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred EEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 467889999999 4556777654 578888764
No 258
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.19 E-value=0.46 Score=42.22 Aligned_cols=30 Identities=10% Similarity=0.268 Sum_probs=22.5
Q ss_pred eeEEEEecCCCEEEEEeCCC----CcEEEEeccC
Q 031020 5 ITDFLISLDDRFLYFSNWLH----GDIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~h----g~I~qyDIsd 34 (167)
+..+.+||||++|.++.-.. ..|+++|+..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 67889999999886554433 3699999764
No 259
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.07 E-value=0.89 Score=37.41 Aligned_cols=30 Identities=17% Similarity=0.307 Sum_probs=23.3
Q ss_pred ceeEEEEec-CCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISL-DDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~-DdRfLYVSnw~hg~I~qyDIsd 34 (167)
-+++|.+|| |+++|+ |+-..+.|++||+..
T Consensus 166 ~V~~l~f~p~~~~~l~-s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 166 SITGLKFNPLNTNQFY-ASSMEGTTRLQDFKG 196 (435)
T ss_dssp CCCEEEECSSCTTEEE-EECSSSCEEEEETTS
T ss_pred CEEEEEEeCCCCCEEE-EEeCCCEEEEeeccC
Confidence 478999998 667775 555678999999863
No 260
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.02 E-value=0.54 Score=42.19 Aligned_cols=31 Identities=10% Similarity=0.076 Sum_probs=24.9
Q ss_pred ceeEEEEecCCCEEEEEeCC----CCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWL----HGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~----hg~I~qyDIsd 34 (167)
....+.+|+|||+|+++.+. ..+|+.+|+..
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 56788999999999887763 45888888775
No 261
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=92.73 E-value=1.2 Score=36.33 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=41.4
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCce
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQM 84 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~ 84 (167)
++.+.+ ++++|++++ ..|.|++||+.+ .+++..+..-. .....+....
T Consensus 365 v~~~~~--~~~~l~s~~-~dg~v~iwd~~~---~~~~~~~~~~~--------------------------~~~~~~~v~~ 412 (445)
T 2ovr_B 365 VTCLQF--NKNFVITSS-DDGTVKLWDLKT---GEFIRNLVTLE--------------------------SGGSGGVVWR 412 (445)
T ss_dssp EEEEEE--CSSEEEEEE-TTSEEEEEETTT---CCEEEEEEECT--------------------------TGGGTCEEEE
T ss_pred EEEEEE--CCCEEEEEe-CCCeEEEEECCC---Cceeeeeeccc--------------------------cCCCCceEEE
Confidence 455555 577876665 578999999775 55665553211 0012234788
Q ss_pred EEEccCCCEEEEEe
Q 031020 85 IQLSLDGKRLYVTN 98 (167)
Q Consensus 85 ~~LS~DGkrLyVaN 98 (167)
+++|++|+.|.++.
T Consensus 413 ~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 413 IRASNTKLVCAVGS 426 (445)
T ss_dssp EEECSSEEEEEEEC
T ss_pred EEecCCEEEEEEcc
Confidence 99999999999988
No 262
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.72 E-value=2.6 Score=37.72 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=21.5
Q ss_pred eeEEEEecCCCEEEE-EeCCC---CcEEEEeccC
Q 031020 5 ITDFLISLDDRFLYF-SNWLH---GDIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYV-Snw~h---g~I~qyDIsd 34 (167)
+..+.+|||||+|.. +.... -.|+++|+..
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t 164 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES 164 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCC
Confidence 567899999997754 44322 3688999875
No 263
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.66 E-value=0.62 Score=35.16 Aligned_cols=37 Identities=5% Similarity=0.208 Sum_probs=28.5
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEE
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQI 44 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v 44 (167)
.++.+.+|+|+++|..+. ..+.|+.||+.. .+.....
T Consensus 69 ~V~~v~~~~~~~~l~sgs-~Dg~v~iw~~~~---~~~~~~~ 105 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGT-SSAEVQLWDVQQ---QKRLRNM 105 (318)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTT---TEEEEEE
T ss_pred eEEEEEECCCCCEEEEEE-CCCcEEEeecCC---ceeEEEe
Confidence 478999999999996555 578999999875 4554443
No 264
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=92.53 E-value=1.4 Score=39.44 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=22.1
Q ss_pred eeEEEEecCCCEEEEEeCCCC----cEEEEeccC
Q 031020 5 ITDFLISLDDRFLYFSNWLHG----DIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg----~I~qyDIsd 34 (167)
+..+.+||||++|.++.-..| .|+++|+..
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t 198 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD 198 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 567899999998865543333 499999874
No 265
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.48 E-value=0.34 Score=39.53 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=22.3
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.++.+.+++|+++|.+++ +|.|..||+..
T Consensus 393 ~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~ 421 (464)
T 3v7d_B 393 LSAITTFYVSDNILVSGS--ENQFNIYNLRS 421 (464)
T ss_dssp CCCEEEEEECSSEEEEEE--TTEEEEEETTT
T ss_pred CccEEEEEeCCCEEEEec--CCeEEEEECCC
Confidence 345678888888887776 68888888765
No 266
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.14 E-value=2.5 Score=34.32 Aligned_cols=31 Identities=13% Similarity=0.235 Sum_probs=26.0
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.-++.+.+|+|+++|++++ ..+.|++||+..
T Consensus 311 ~~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~ 341 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISAS-MDTTIRIWDLEN 341 (464)
T ss_dssp SCEEEEEEETTTTEEEEEE-TTSCEEEEETTT
T ss_pred CCEEEEEEcCCCCEEEEEe-CCCcEEEEECCC
Confidence 3578899999999998776 578999999864
No 267
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.95 E-value=0.89 Score=39.49 Aligned_cols=76 Identities=13% Similarity=0.068 Sum_probs=51.8
Q ss_pred ceeEEEEecCCCEEEEEeCCC-CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCC
Q 031020 4 LITDFLISLDDRFLYFSNWLH-GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGP 82 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h-g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P 82 (167)
.+-||++.++| -.||++-.. +.|..++ |...+++ ...+-. |... -.-||
T Consensus 138 ~~nDvavD~~G-naYVt~s~~~~~I~rV~---pdG~~~~-~~~~~~-------------------~~~~------~~~G~ 187 (334)
T 2p9w_A 138 GVVQSAQDRDG-NSYVAFALGMPAIARVS---ADGKTVS-TFAWES-------------------GNGG------QRPGY 187 (334)
T ss_dssp EEEEEEECTTS-CEEEEEEESSCEEEEEC---TTSCCEE-EEEECC-------------------CCSS------SCCSC
T ss_pred CCceeEECCCC-CEEEeCCCCCCeEEEEe---CCCCEEe-eeeecC-------------------CCcc------cccCc
Confidence 46799999998 578977667 8888777 3322232 111100 1111 12469
Q ss_pred ceEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEee
Q 031020 83 QMIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVN 125 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD 125 (167)
.-++++|||++|+|+. . ++.+.+||++
T Consensus 188 nGIv~~pdg~~Liv~~---------------~-~g~L~~fD~~ 214 (334)
T 2p9w_A 188 SGITFDPHSNKLIAFG---------------G-PRALTAFDVS 214 (334)
T ss_dssp SEEEEETTTTEEEEES---------------S-SSSEEEEECS
T ss_pred ceEEEeCCCCEEEEEc---------------C-CCeEEEEcCC
Confidence 9999999999999998 4 7789999985
No 268
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.91 E-value=1 Score=39.51 Aligned_cols=74 Identities=18% Similarity=0.323 Sum_probs=49.4
Q ss_pred ceeEEEEe-c------CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCC---Cccc
Q 031020 4 LITDFLIS-L------DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSD---VPEV 73 (167)
Q Consensus 4 l~tdI~IS-~------DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~---~~~~ 73 (167)
+..||+|. . ++.|.|++.-+.+.|.+||+.+...-+ |. -..+ .|+ ...+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swR----v~-~~~~----------------~pd~~~~~~i 211 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWN----VT-HPTF----------------KAERPTKFDY 211 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEE----EE-CGGG----------------SCCSCEEEEE
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEE----Ec-cCCC----------------ccccCcceEE
Confidence 57889988 2 278999999999999999998622111 11 1111 122 1334
Q ss_pred cCccC--CCCCceEEEccC----CCEEEEEe
Q 031020 74 QGHRL--RGGPQMIQLSLD----GKRLYVTN 98 (167)
Q Consensus 74 ~g~~~--~g~P~~~~LS~D----GkrLyVaN 98 (167)
.|+.+ ..|---++|||+ +++||..-
T Consensus 212 ~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 212 GGKEYEFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp TTEEEEECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred CCEEeEeccCceEEEecCCcCCCCeEEEEEE
Confidence 45443 556788999999 89999865
No 269
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.79 E-value=0.69 Score=38.29 Aligned_cols=26 Identities=23% Similarity=0.588 Sum_probs=21.1
Q ss_pred EEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 9 LISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 9 ~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.++++++.||.+.-+...|.+.+++.
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTT
T ss_pred EeeEECCEEEEEeCCCceEEEEECCC
Confidence 46889999999888778888888654
No 270
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.67 E-value=0.9 Score=40.70 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=24.9
Q ss_pred ceeEEEEecCCCEEEEEeCCC---CcEEEEeccCC
Q 031020 4 LITDFLISLDDRFLYFSNWLH---GDIRQYNIEDP 35 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h---g~I~qyDIsdp 35 (167)
....+.+|+|+|+|+++.... ++|+.+|+.++
T Consensus 235 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 235 RYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp SEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred EEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 456788999999998876532 58899998764
No 271
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=91.34 E-value=1.1 Score=42.03 Aligned_cols=58 Identities=10% Similarity=0.110 Sum_probs=41.8
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCc
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQ 83 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~ 83 (167)
-+..+.+|+ +++|..+. ..+.|++||+.. .++...+...+ ...
T Consensus 60 ~V~~l~fsp-g~~L~S~s-~D~~v~lWd~~~---~~~~~~~~~~~--------------------------------~V~ 102 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVIN-AKDTVYVLSLYS---QKVLTTVFVPG--------------------------------KIT 102 (902)
T ss_dssp CEEEEEEET-TTEEEEEE-TTCEEEEEETTT---CSEEEEEECSS--------------------------------CEE
T ss_pred CEEEEEEcC-CCEEEEEE-CcCeEEEEECCC---CcEEEEEcCCC--------------------------------CEE
Confidence 478899999 88665544 578999999875 34444332111 256
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
.+++||||++|+++.
T Consensus 103 ~v~~sp~g~~l~sgs 117 (902)
T 2oaj_A 103 SIDTDASLDWMLIGL 117 (902)
T ss_dssp EEECCTTCSEEEEEE
T ss_pred EEEECCCCCEEEEEc
Confidence 788999999999987
No 272
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.28 E-value=2.3 Score=33.76 Aligned_cols=15 Identities=20% Similarity=-0.144 Sum_probs=7.9
Q ss_pred EEEEecCCCEEEEEe
Q 031020 7 DFLISLDDRFLYFSN 21 (167)
Q Consensus 7 dI~IS~DdRfLYVSn 21 (167)
.+..++||++|++.+
T Consensus 81 ~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 81 TARILPDGNALVAWC 95 (276)
T ss_dssp EEEECTTSCEEEEEE
T ss_pred ccEECCCCCEEEEec
Confidence 345555665555444
No 273
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=91.22 E-value=1.6 Score=38.18 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=33.6
Q ss_pred EEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEEEccCCCEEEE
Q 031020 17 LYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQLSLDGKRLYV 96 (167)
Q Consensus 17 LYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~LS~DGkrLyV 96 (167)
+.+|.-..+.|+.||+.. .++..++..++. + ...-..+++||||+++.+
T Consensus 195 ~LaSgS~D~TIkIWDl~T---Gk~l~tL~g~~~---------------------------~-v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKT---GQLLKKMHIDDS---------------------------Y-QASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEETTSEEEEEETTT---CCEEEEEECCC-------------------------------CCCEEEEEEETTEEEEE
T ss_pred eEEEecCCCcEEEEECCC---CcEEEEEcCCCc---------------------------c-eeeeEEEEECCCCCEEEE
Confidence 446767789999999754 666666643321 0 112455689999999877
Q ss_pred Ee
Q 031020 97 TN 98 (167)
Q Consensus 97 aN 98 (167)
.+
T Consensus 244 ~s 245 (356)
T 2w18_A 244 LS 245 (356)
T ss_dssp EC
T ss_pred ec
Confidence 65
No 274
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.09 E-value=1.5 Score=34.95 Aligned_cols=35 Identities=11% Similarity=0.257 Sum_probs=21.6
Q ss_pred EEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEe
Q 031020 7 DFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 46 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~ 46 (167)
.+.+++||++| |+....+.|..|| +. .+++-++..
T Consensus 129 ~v~~~~~G~~l-v~~~~~~~v~~~d---~~-G~~~w~~~~ 163 (276)
T 3no2_A 129 QINKNKKGNYL-VPLFATSEVREIA---PN-GQLLNSVKL 163 (276)
T ss_dssp CCEECTTSCEE-EEETTTTEEEEEC---TT-SCEEEEEEC
T ss_pred CceECCCCCEE-EEecCCCEEEEEC---CC-CCEEEEEEC
Confidence 34567788766 4555677888777 33 555544443
No 275
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.70 E-value=2.8 Score=34.09 Aligned_cols=61 Identities=13% Similarity=-0.004 Sum_probs=45.2
Q ss_pred CceeEEEEecCCCEEEEEeC--CCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCC
Q 031020 3 GLITDFLISLDDRFLYFSNW--LHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 80 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw--~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g 80 (167)
+.+..+..+++++.+.++.- ..+.|+.||+.. .++...+..+. .
T Consensus 277 ~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t---~~~~~~~~~~~----------------------------~--- 322 (420)
T 4gga_A 277 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS---GACLSAVDAHS----------------------------Q--- 322 (420)
T ss_dssp SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT---TEEEEEEECSS----------------------------C---
T ss_pred CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc---cccceeecccc----------------------------c---
Confidence 45678999999888776543 468899999764 56666665443 1
Q ss_pred CCceEEEccCCCEEEEEe
Q 031020 81 GPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 81 ~P~~~~LS~DGkrLyVaN 98 (167)
...+.++++++.|+++.
T Consensus 323 -v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 323 -VCSILWSPHYKELISGH 339 (420)
T ss_dssp -EEEEEEETTTTEEEEEE
T ss_pred -eeeeeecCCCCeEEEEE
Confidence 56778899999999876
No 276
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=90.09 E-value=0.61 Score=42.12 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=43.6
Q ss_pred CceeEEEEecC---CCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 3 GLITDFLISLD---DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 3 ~l~tdI~IS~D---dRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
+-++.|.+||| +++|+.+. ..|.|+.||+.....+... .+.. .....
T Consensus 205 ~~V~~l~~sp~~~~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~-~~~~----------------------------~~~~~ 254 (753)
T 3jro_A 205 DWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPWKK-TLLK----------------------------EEKFP 254 (753)
T ss_dssp SCEEEEEECCCCSSSEEEEEEE-SSSCEEEEEESSSSSCCBC-CBSS----------------------------SSCCS
T ss_pred CcEEEEEeccCCCCCCEEEEEe-cCCEEEEecCCCCCCccee-EEec----------------------------cCCCC
Confidence 45789999999 77776555 5789999998763211110 0000 01123
Q ss_pred CCCceEEEccCCCEEEEEe
Q 031020 80 GGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaN 98 (167)
+....+++|+||++|+++.
T Consensus 255 ~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 255 DVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp SCCCCEEECTTTCCEEEEC
T ss_pred CceEEEEEcCCCCEEEEEc
Confidence 3477889999999998886
No 277
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.39 E-value=0.38 Score=39.91 Aligned_cols=25 Identities=28% Similarity=0.359 Sum_probs=17.2
Q ss_pred EEEecCCCEEEEEeCCCC-cEEEEec
Q 031020 8 FLISLDDRFLYFSNWLHG-DIRQYNI 32 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~hg-~I~qyDI 32 (167)
+.++|++++||.+.|..+ .|.+-++
T Consensus 189 ~~~~P~g~~iy~t~~~~~~~I~~~~l 214 (302)
T 3s25_A 189 KPVVLDDTNVYYMDVNRDNAIVHVNI 214 (302)
T ss_dssp EEEEEETTEEEEEEGGGTTEEEEECS
T ss_pred ceeeecCCEEEEEEcCCCcEEEEEEC
Confidence 346799999999998643 4554443
No 278
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.38 E-value=2.8 Score=32.85 Aligned_cols=31 Identities=10% Similarity=0.212 Sum_probs=25.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 3 GLITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
..+.++.+|+|+++|..+. ..+.|++||+..
T Consensus 14 ~~V~~v~~s~~g~~lasgs-~D~~v~lwd~~~ 44 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCS-SDRSVKIFDVRN 44 (316)
T ss_dssp CCEEEEEECGGGCEEEEEE-TTTEEEEEEEET
T ss_pred CeEEEeeEcCCCCEEEEEe-CCCeEEEEEecC
Confidence 3578999999999986665 578999999875
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.36 E-value=0.92 Score=39.40 Aligned_cols=29 Identities=3% Similarity=0.041 Sum_probs=26.6
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
++.|+++||++.|+|+.- .+.|..||+..
T Consensus 187 ~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp CSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred cceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 579999999999999987 89999999884
No 280
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.16 E-value=1.4 Score=38.88 Aligned_cols=31 Identities=16% Similarity=0.050 Sum_probs=23.4
Q ss_pred ceeEE--EEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDF--LISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI--~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
-+.+| ..|+|++.+.+|+-..+.|+.||+.+
T Consensus 310 ~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 310 YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp CEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 35677 56888855557777789999999876
No 281
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.07 E-value=2 Score=33.70 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=41.2
Q ss_pred ceeEEEEecCC----CEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCC
Q 031020 4 LITDFLISLDD----RFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLR 79 (167)
Q Consensus 4 l~tdI~IS~Dd----RfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~ 79 (167)
.+.++.+|||+ ++| +|+-..+.|+.|++.+....+...++. .+ ..
T Consensus 214 ~V~~v~~sp~~~~~~~~l-as~s~D~~v~iw~~~~~~~~~~~~~~~-~~-----------------------------~~ 262 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTI-ASCSQDGRVFIWTCDDASSNTWSPKLL-HK-----------------------------FN 262 (316)
T ss_dssp CEEEEECCCCSSCSCCEE-EEEETTCEEEEEECSSTTCCCCBCCEE-EE-----------------------------CS
T ss_pred ceEEEEecCCCCCCCceE-EEEcCCCeEEEEEccCccccchhhhhh-hc-----------------------------CC
Confidence 47889999997 555 566578899999987632211100000 00 11
Q ss_pred CCCceEEEccCCCEEEEEe
Q 031020 80 GGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaN 98 (167)
+.-..+++||||++|.++.
T Consensus 263 ~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 263 DVVWHVSWSITANILAVSG 281 (316)
T ss_dssp SCEEEEEECTTTCCEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEc
Confidence 2356789999999998887
No 282
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.40 E-value=2.5 Score=37.34 Aligned_cols=70 Identities=17% Similarity=0.085 Sum_probs=42.0
Q ss_pred eeEEEEecCCC-EEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCc--cCCCC
Q 031020 5 ITDFLISLDDR-FLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGH--RLRGG 81 (167)
Q Consensus 5 ~tdI~IS~DdR-fLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~--~~~g~ 81 (167)
+..|++.|||+ .|||+-+ .|.|++++-+.......+..+ |+ .+..|. .-++|
T Consensus 16 P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~-----------------------~~-~~~~g~~~~~e~G 70 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDI-----------------------HK-LVQSGIKGGDERG 70 (463)
T ss_dssp EEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEEC-----------------------TT-TBCCCCSSSCCCS
T ss_pred ceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCC-----------------------cc-eeccCccccCCCc
Confidence 56889999996 7889987 588888863211001111111 00 111110 12457
Q ss_pred CceEEEccC---CCEEEEEeC
Q 031020 82 PQMIQLSLD---GKRLYVTNS 99 (167)
Q Consensus 82 P~~~~LS~D---GkrLyVaNs 99 (167)
+-.|+|+|| .++|||+.+
T Consensus 71 llgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 71 LLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp EEEEEECTTHHHHCEEEEEEE
T ss_pred ceeeEeCCCCcCCCEEEEEEe
Confidence 888999997 679999985
No 283
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.23 E-value=5.2 Score=37.87 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=66.0
Q ss_pred eEEEEecCCCEEEEEeCCCCcEEEEeccCC------CC-CeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccC
Q 031020 6 TDFLISLDDRFLYFSNWLHGDIRQYNIEDP------KN-PVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRL 78 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp------~~-pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~ 78 (167)
-...+..+| +.|.|.++...|+.|+|.+. ++ -..+.++.+.
T Consensus 381 lHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~------------------------------- 428 (638)
T 3sbq_A 381 LHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVH------------------------------- 428 (638)
T ss_dssp EEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECS-------------------------------
T ss_pred cEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccc-------------------------------
Confidence 345678899 99999999999999999852 11 1345555543
Q ss_pred CCCCceEE------EccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCC
Q 031020 79 RGGPQMIQ------LSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDG 147 (167)
Q Consensus 79 ~g~P~~~~------LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~g 147 (167)
+.|-.+. ..+|||+|.+.|.+-+ ..|-|-.-..=.+--.||+ ...+|+|-.|+.+ |+ ||.-
T Consensus 429 -YqpGH~~~~~get~~~dGk~lv~lnK~sk---drfl~vGpl~pen~QlidI--sGdkM~lv~D~P~-~~-EPHd 495 (638)
T 3sbq_A 429 -YQPGHLHASLCETNEADGKWLVALSKFSK---DRFLPVGPLHPENDQLIDI--SGDEMKLVHDGPT-FA-EPHD 495 (638)
T ss_dssp -SCEEEEEETTTTSTTCCSCEEEEEESCCT---TSSCCCSSSCCEEEEEEEC--SSSSCEEEEEEEE-SS-CCCC
T ss_pred -cCCcccccCCCccCCCCccEEEEeccccc---ccCcCCCCCCCCcceeEec--CCCceEEEecCCC-CC-CCcc
Confidence 2244443 3789999999995322 1233333222233344677 4558999999988 64 5544
No 284
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=86.68 E-value=7.9 Score=34.84 Aligned_cols=63 Identities=13% Similarity=0.032 Sum_probs=42.8
Q ss_pred CceeEEEEecC--CCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCC
Q 031020 3 GLITDFLISLD--DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRG 80 (167)
Q Consensus 3 ~l~tdI~IS~D--dRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g 80 (167)
+-++.|.+|++ +++|..+. ..|.|+.||+... ..+.+.... + ..+
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s-~Dg~I~vwd~~~~-~~~~~~~~~--~-----------------------------h~~ 100 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCS-YDGKVLIWKEENG-RWSQIAVHA--V-----------------------------HSA 100 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEE-TTSCEEEEEEETT-EEEEEEEEC--C-----------------------------CSS
T ss_pred CceEEEEecCCCCCCEEEEEe-CCCeEEEEECCCC-ccccccccc--C-----------------------------CCC
Confidence 35788999998 88887666 5789999998751 111222211 1 112
Q ss_pred CCceEEEccC--CCEEEEEe
Q 031020 81 GPQMIQLSLD--GKRLYVTN 98 (167)
Q Consensus 81 ~P~~~~LS~D--GkrLyVaN 98 (167)
....+++||+ |+.|+++.
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs 120 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVAS 120 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEE
T ss_pred CeEEEEECCCCCCCEEEEEe
Confidence 3677889999 88888887
No 285
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=86.30 E-value=3.1 Score=36.91 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=20.7
Q ss_pred ceeEEEEecCCCEEEEEeCCC-C--cEEEEe
Q 031020 4 LITDFLISLDDRFLYFSNWLH-G--DIRQYN 31 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~h-g--~I~qyD 31 (167)
....+.+|+|||+|.++.+.. + +|+.++
T Consensus 228 ~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 228 TFLQSDLSRDGKYLFVYILRGWSENDVYWKR 258 (695)
T ss_dssp CEEEEEECTTSCCEEEEEEETTTEEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEeCCCCceEEEEEc
Confidence 567889999999998887655 3 455443
No 286
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=85.85 E-value=3.8 Score=35.53 Aligned_cols=82 Identities=10% Similarity=0.052 Sum_probs=48.1
Q ss_pred CCCceeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeE--------EEEEEeCc---eeecCCceeEeeCCCCCCCCC
Q 031020 1 MPGLITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVL--------TGQIWVGG---LFRKGSPVVAVTDDGQPYQSD 69 (167)
Q Consensus 1 ~p~l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pkl--------vg~v~~GG---~~~~~~~v~v~~~~~~~~~p~ 69 (167)
+|. ++.+.+ |+++|||+ ..+.|+.||+..-.+.+- ..-.++.. .....+.|.|..-++....+
T Consensus 87 lp~-V~~l~f--d~~~L~v~--~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~- 160 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS--TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ- 160 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE--ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-
T ss_pred CCC-eeEEEE--CCCEEEEE--cCCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-
Confidence 577 899999 99999999 458999999876443321 11111211 11233555555443322211
Q ss_pred CccccCccCCCCCceEEEccCCCEEEEEe
Q 031020 70 VPEVQGHRLRGGPQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 70 ~~~~~g~~~~g~P~~~~LS~DGkrLyVaN 98 (167)
+..+.+-++.||+| ++++.
T Consensus 161 --------~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 161 --------LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp --------EEESEEEEEECSSE--EEEEE
T ss_pred --------ccCCceEEEEcCCc--eEEEE
Confidence 22247788999999 45554
No 287
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=84.47 E-value=10 Score=30.73 Aligned_cols=28 Identities=11% Similarity=0.103 Sum_probs=16.7
Q ss_pred ceeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 4 LITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 4 l~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.++.+.+ |+++|++++. .+.|+.||+..
T Consensus 241 ~v~~~~~--~~~~l~~~~~-dg~i~iwd~~~ 268 (445)
T 2ovr_B 241 AVRCVQY--DGRRVVSGAY-DFMVKVWDPET 268 (445)
T ss_dssp CEEEEEE--CSSCEEEEET-TSCEEEEEGGG
T ss_pred cEEEEEE--CCCEEEEEcC-CCEEEEEECCC
Confidence 3445555 5666666664 45666666654
No 288
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=84.02 E-value=2.2 Score=37.58 Aligned_cols=29 Identities=3% Similarity=-0.138 Sum_probs=23.0
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
+..|.+|||++.| +|.-..+.|+.||+..
T Consensus 358 v~~v~fsp~~~~l-~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 358 LVPVVYCPQIYSY-IYSDGASSLRAVPSRA 386 (524)
T ss_dssp CCCEEEETTTTEE-EEECSSSEEEEEETTC
T ss_pred ccceEeCCCcCeE-EEeCCCCcEEEEECcc
Confidence 4578999999985 5555677899999876
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=83.60 E-value=4.5 Score=35.99 Aligned_cols=16 Identities=19% Similarity=-0.060 Sum_probs=13.3
Q ss_pred EEEEecCCCEEEEEeC
Q 031020 7 DFLISLDDRFLYFSNW 22 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw 22 (167)
.++++|+.+.|||.+.
T Consensus 390 ~~a~dp~~g~~yv~~~ 405 (571)
T 2ad6_A 390 VDSYDPESRTLYAGLN 405 (571)
T ss_dssp BCEEETTTTEEEEEEE
T ss_pred CceECCCCCEEEEEch
Confidence 3678999999999864
No 290
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=82.99 E-value=13 Score=30.18 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=20.0
Q ss_pred EEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 9 LISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 9 ~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
.++.|+++|.++. ..|.|++||+..
T Consensus 138 ~~~~d~~~l~~g~-~dg~i~iwd~~~ 162 (435)
T 1p22_A 138 CLQYDDQKIVSGL-RDNTIKIWDKNT 162 (435)
T ss_dssp EEECCSSEEEEEE-SSSCEEEEESSS
T ss_pred EEEECCCEEEEEe-CCCeEEEEeCCC
Confidence 5677999987666 578999999764
No 291
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=81.21 E-value=6.7 Score=35.57 Aligned_cols=15 Identities=7% Similarity=0.268 Sum_probs=12.6
Q ss_pred EEEEecCCCEEEEEe
Q 031020 7 DFLISLDDRFLYFSN 21 (167)
Q Consensus 7 dI~IS~DdRfLYVSn 21 (167)
.+++||+.+.|||..
T Consensus 397 ~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 397 PMSFNPQTGLVYLPA 411 (677)
T ss_dssp CCEEETTTTEEEEEE
T ss_pred CceEcCCCCEEEEeC
Confidence 467899999999964
No 292
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.39 E-value=10 Score=35.40 Aligned_cols=18 Identities=33% Similarity=0.303 Sum_probs=16.9
Q ss_pred CceEEEccCCCEEEEEeC
Q 031020 82 PQMIQLSLDGKRLYVTNS 99 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaNs 99 (167)
|.-+++|||+|+|||+.+
T Consensus 533 pnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 533 VTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEEECTTSSEEEEEEE
T ss_pred ccCCEECCCCCEEEEEEe
Confidence 899999999999999984
No 293
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=78.77 E-value=21 Score=28.91 Aligned_cols=13 Identities=15% Similarity=0.289 Sum_probs=7.9
Q ss_pred EEccCCCEEEEEe
Q 031020 86 QLSLDGKRLYVTN 98 (167)
Q Consensus 86 ~LS~DGkrLyVaN 98 (167)
.++.+|++|+++.
T Consensus 261 ~~~~~~~~l~s~~ 273 (435)
T 1p22_A 261 VVDFDDKYIVSAS 273 (435)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEeCCCEEEEEe
Confidence 3444677777665
No 294
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=77.21 E-value=4.8 Score=36.73 Aligned_cols=33 Identities=6% Similarity=0.039 Sum_probs=24.8
Q ss_pred CceeEEEEecCCCEEEEEeCCC--CcEEEEeccCC
Q 031020 3 GLITDFLISLDDRFLYFSNWLH--GDIRQYNIEDP 35 (167)
Q Consensus 3 ~l~tdI~IS~DdRfLYVSnw~h--g~I~qyDIsdp 35 (167)
.+.+.+.+|+|||+|+++.+.+ .+|+.+|++++
T Consensus 271 ~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 271 LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 3567789999999999887654 46777777653
No 295
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=75.30 E-value=19 Score=35.39 Aligned_cols=104 Identities=13% Similarity=0.121 Sum_probs=63.2
Q ss_pred CCceeEEEEecC------CCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccC
Q 031020 2 PGLITDFLISLD------DRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQG 75 (167)
Q Consensus 2 p~l~tdI~IS~D------dRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g 75 (167)
+.=++.+.|++- .+|+-|.+|..+.|+.|.+.+ .+.+....+++..
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~---l~~~~~~~L~~~~------------------------- 604 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS---FELLHKEMLGGEI------------------------- 604 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT---CCEEEEEECCSSC-------------------------
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC---CCeEEEEECCCCC-------------------------
Confidence 444666777653 479999999999999999864 4445555554411
Q ss_pred ccCCCCCceEEEccCC--CEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCeeecCceeEeccCCCCCCcceee
Q 031020 76 HRLRGGPQMIQLSLDG--KRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMAINPNFFVDFEAEPDGPALAHE 153 (167)
Q Consensus 76 ~~~~g~P~~~~LS~DG--krLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~l~~~F~vDf~~~p~gp~~~he 153 (167)
-|+.+.+..-+ -+|+++- +++.++++.+|+.+|.|.-....+ .|. =|+.-|.
T Consensus 605 -----~p~si~l~~~~~~~~L~igl----------------~dG~l~~~~~d~~tg~l~d~r~~~--LG~---~pv~L~~ 658 (1158)
T 3ei3_A 605 -----IPRSILMTTFESSHYLLCAL----------------GDGALFYFGLNIETGLLSDRKKVT--LGT---QPTVLRT 658 (1158)
T ss_dssp -----CEEEEEEEEETTEEEEEEEE----------------TTSEEEEEEECTTTCCEEEEEEEE--CCS---SCCEEEE
T ss_pred -----CCcEEEEEEeCCCcEEEEEe----------------CCCeEEEEEEcCCCCccccceeEE--cCC---CceEEEE
Confidence 15555443222 2455554 356888889999999885333222 232 2555565
Q ss_pred eecCCC
Q 031020 154 MRYPGG 159 (167)
Q Consensus 154 ~r~pgg 159 (167)
++-.|+
T Consensus 659 ~~~~~~ 664 (1158)
T 3ei3_A 659 FRSLST 664 (1158)
T ss_dssp EESSSC
T ss_pred EeeCCc
Confidence 554444
No 296
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=72.90 E-value=11 Score=28.81 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=12.6
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEe
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYN 31 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyD 31 (167)
++.+.+..+++ ||++.. .+.|..||
T Consensus 139 ~~~~~~~~~g~-l~vgt~-~~~l~~~d 163 (330)
T 3hxj_A 139 YATPIVSEDGT-IYVGSN-DNYLYAIN 163 (330)
T ss_dssp CSCCEECTTSC-EEEECT-TSEEEEEC
T ss_pred eeeeEEcCCCE-EEEEcC-CCEEEEEC
Confidence 44455666666 445553 23444444
No 297
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=72.63 E-value=8.7 Score=35.49 Aligned_cols=17 Identities=35% Similarity=0.317 Sum_probs=13.9
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
.--.++|||||+|||+-
T Consensus 533 ~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 533 VTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred CcCeeECCCCCEEEEEE
Confidence 33467999999999986
No 298
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=71.93 E-value=21 Score=32.32 Aligned_cols=84 Identities=8% Similarity=0.033 Sum_probs=50.4
Q ss_pred eEEEEecCCCEEEEEeCCC------------------CcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCC
Q 031020 6 TDFLISLDDRFLYFSNWLH------------------GDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQ 67 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~h------------------g~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~ 67 (167)
+.+.+++++..||+..... ++|..+|.. +.++.=+..++.. +.+
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~---TG~~~W~~~~~~~-------------d~w-- 307 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPD---TGKYKWHYQETPG-------------DNW-- 307 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT---TCCEEEEEESSTT-------------CCS--
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECC---CCCEEEEEecCCC-------------ccc--
Confidence 4578899999999987542 247777744 4666555544320 000
Q ss_pred CCCccccCccCCCCCceEEEccCC---CEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 68 SDVPEVQGHRLRGGPQMIQLSLDG---KRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 68 p~~~~~~g~~~~g~P~~~~LS~DG---krLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
.......|-.+.+..|| +.||+++ +.+.++.+|. +||++.
T Consensus 308 -------d~~~~~~p~l~~~~~dG~~~~~l~~~~----------------~~G~l~~lD~--~tG~~l 350 (677)
T 1kb0_A 308 -------DYTSTQPMILADIKIAGKPRKVILHAP----------------KNGFFFVLDR--TNGKFI 350 (677)
T ss_dssp -------CCCCCSCCEEEEEEETTEEEEEEEECC----------------TTSEEEEEET--TTCCEE
T ss_pred -------ccccCCCcEEEecccCCcEeeEEEEEC----------------CCCEEEEEEC--CCCCEe
Confidence 00122347777777799 4556555 3456666766 788873
No 299
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=70.78 E-value=15 Score=29.14 Aligned_cols=20 Identities=5% Similarity=0.376 Sum_probs=14.0
Q ss_pred CCCEEEEEeCCCCcEEEEecc
Q 031020 13 DDRFLYFSNWLHGDIRQYNIE 33 (167)
Q Consensus 13 DdRfLYVSnw~hg~I~qyDIs 33 (167)
++..||+.+. .+.|..+|..
T Consensus 238 ~~~~v~~~~~-~g~l~~~d~~ 257 (376)
T 3q7m_A 238 VNGVVFALAY-NGNLTALDLR 257 (376)
T ss_dssp ETTEEEEECT-TSCEEEEETT
T ss_pred ECCEEEEEec-CcEEEEEECC
Confidence 3567888764 5678888864
No 300
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=70.34 E-value=29 Score=27.46 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=20.2
Q ss_pred CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeC
Q 031020 13 DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVG 47 (167)
Q Consensus 13 DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~G 47 (167)
++..||+++. .+.|..||..+ .++.=+..++
T Consensus 52 ~~~~v~~~~~-~g~v~a~d~~t---G~~~W~~~~~ 82 (376)
T 3q7m_A 52 ADNVVYAADR-AGLVKALNADD---GKEIWSVSLA 82 (376)
T ss_dssp ETTEEEEECT-TSEEEEEETTT---CCEEEEEECC
T ss_pred ECCEEEEEcC-CCeEEEEEccC---CceeeeecCc
Confidence 5778999875 56888888543 4554444443
No 301
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=66.17 E-value=52 Score=29.09 Aligned_cols=46 Identities=11% Similarity=0.120 Sum_probs=26.5
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCe
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGM 131 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l 131 (167)
.++++++..+||+++.--++|....-|.--.-...++.+|. +||++
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~--~tG~~ 284 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDL--DTGMA 284 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEET--TTCCE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEec--CCCcE
Confidence 36677888899999865555655542210000124555555 67776
No 302
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=64.44 E-value=26 Score=31.73 Aligned_cols=14 Identities=14% Similarity=0.330 Sum_probs=12.3
Q ss_pred EEEecCCCEEEEEe
Q 031020 8 FLISLDDRFLYFSN 21 (167)
Q Consensus 8 I~IS~DdRfLYVSn 21 (167)
+++||+.+.||+..
T Consensus 394 ~a~dp~~~~~yv~~ 407 (689)
T 1yiq_A 394 MSYNPDTGLVYIPA 407 (689)
T ss_dssp CEEETTTTEEEEEE
T ss_pred ceECCCCCEEEEec
Confidence 78999999999973
No 303
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=63.45 E-value=39 Score=29.37 Aligned_cols=63 Identities=13% Similarity=0.235 Sum_probs=41.3
Q ss_pred EEEecCCCEEEEEeCCCCcEEEEeccC-CCCCeEEEEEEeCceeecCCceeEeeCCCCCCCCCCccccCccCCCCCceEE
Q 031020 8 FLISLDDRFLYFSNWLHGDIRQYNIED-PKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQSDVPEVQGHRLRGGPQMIQ 86 (167)
Q Consensus 8 I~IS~DdRfLYVSnw~hg~I~qyDIsd-p~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p~~~~~~g~~~~g~P~~~~ 86 (167)
+.+.+..-.||++.-.++.|..|+... +-+++-.+.|..-. ++. +|..|.
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~----------------------------~l~-~pd~~~ 330 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS----------------------------RFV-FGTDIS 330 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT----------------------------TCC-SEEEEE
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC----------------------------Ccc-ccCeEE
Confidence 445434568999999999999999765 44444444443221 111 599999
Q ss_pred EccCCCEEEEEeC
Q 031020 87 LSLDGKRLYVTNS 99 (167)
Q Consensus 87 LS~DGkrLyVaNs 99 (167)
+..||.-.+.+|+
T Consensus 331 i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 331 VDSKGGLWFMSNG 343 (381)
T ss_dssp ECTTSCEEEEECS
T ss_pred ECCCCeEEEEECc
Confidence 9999964444554
No 304
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=62.29 E-value=38 Score=30.63 Aligned_cols=83 Identities=10% Similarity=0.056 Sum_probs=52.8
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCC----CCccccCccCCC
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS----DVPEVQGHRLRG 80 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p----~~~~~~g~~~~g 80 (167)
+..++++++...|||..+ +.|.+.+. +..+...+.+|-.. +...|.| ..+..+|+.-.-
T Consensus 20 ~~~l~~d~~~g~lyvGA~--n~ly~Ls~----~L~~~~~~~tgP~~-----------ds~~C~p~~~~~~C~~~~~~~dN 82 (539)
T 3al9_A 20 FNHLTVHRRTGAVYVGAI--NRVYKLTG----NLTIQVAHKTGPEE-----------DNKACYPPLIVQPCSEVLTLTNN 82 (539)
T ss_dssp EEEEEECTTTCCEEEEET--TEEEEECT----TCCEEEEEECCCEE-----------ECTTCSSCTTTSCCCSCCEEECC
T ss_pred EEEEEEeCCCCEEEEEEe--eeEEECCC----CcccccccccCCcc-----------CcccccCccchhhccccCCCCCc
Confidence 577899999999999986 66776662 46666677776521 1222333 334444432111
Q ss_pred CCceEEEccCCCEEEEEeCCCccc
Q 031020 81 GPQMIQLSLDGKRLYVTNSLFSAW 104 (167)
Q Consensus 81 ~P~~~~LS~DGkrLyVaNsl~s~w 104 (167)
-=+.+.+.+.+.+||++-+.|.+-
T Consensus 83 ~nkvLl~~~~~~~L~~CGS~~qg~ 106 (539)
T 3al9_A 83 VNKLLIIDYSENRLLACGSLYQGV 106 (539)
T ss_dssp CEEEEEEEGGGTEEEEEESSTTTC
T ss_pred eEEEEEEecCCCeEEEeecCCCCC
Confidence 123467778899999998877654
No 305
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=60.05 E-value=33 Score=29.80 Aligned_cols=15 Identities=13% Similarity=0.175 Sum_probs=12.9
Q ss_pred eEEEccCCCEEEEEe
Q 031020 84 MIQLSLDGKRLYVTN 98 (167)
Q Consensus 84 ~~~LS~DGkrLyVaN 98 (167)
-+++||||++|+.+.
T Consensus 331 ~vafSPDG~~LaSGS 345 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEECSSSSEEEEEC
T ss_pred EEEECCCCCEEEEEE
Confidence 378999999999876
No 306
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=57.52 E-value=24 Score=30.44 Aligned_cols=28 Identities=7% Similarity=-0.002 Sum_probs=22.9
Q ss_pred eeEEEEecCCCEEEEEeCCCCcEEEEeccC
Q 031020 5 ITDFLISLDDRFLYFSNWLHGDIRQYNIED 34 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~I~qyDIsd 34 (167)
+.-++||+..+.|++++. +.+.+|+..+
T Consensus 40 ~nlLais~~~gll~a~~~--~~l~v~~~~~ 67 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASG--SKAVVGELQL 67 (388)
T ss_dssp CBCEEEETTTTEEEEEET--TEEEEEEHHH
T ss_pred ccEEEEcCCCCEEEEeCC--CEEEEEEhhH
Confidence 456899999999998875 5788898765
No 307
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=54.60 E-value=57 Score=29.34 Aligned_cols=14 Identities=7% Similarity=0.235 Sum_probs=12.0
Q ss_pred EEEecCCCEEEEEe
Q 031020 8 FLISLDDRFLYFSN 21 (167)
Q Consensus 8 I~IS~DdRfLYVSn 21 (167)
+++||+.+.+||..
T Consensus 386 ~a~dp~~g~~yv~~ 399 (668)
T 1kv9_A 386 MSFNPGTGLVYIPY 399 (668)
T ss_dssp CEEETTTTEEEEEE
T ss_pred ceECCCCCEEEEec
Confidence 68999999999954
No 308
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=52.96 E-value=50 Score=29.17 Aligned_cols=80 Identities=8% Similarity=-0.017 Sum_probs=46.1
Q ss_pred eEEEEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCceeecCCceeEeeCCCCCCCC-CCccccCcc--CCCCC
Q 031020 6 TDFLISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLFRKGSPVVAVTDDGQPYQS-DVPEVQGHR--LRGGP 82 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~~~~~~v~v~~~~~~~~~p-~~~~~~g~~--~~g~P 82 (167)
+.++++++...|||..+ +.|.+.+ .+.++..++.+|=.. +-.|++ ..+..+++. -.--=
T Consensus 18 ~~l~ld~~~~~lYVGA~--n~ly~L~----~~L~~~~~~~tgP~~------------d~~c~~~~~c~~~~~~~~tdn~N 79 (527)
T 4fww_A 18 VTYEGDRNESAVFVAIR--NRLHVLG----PDLKSVQSLATGPAG------------DPGCQTCAACGPGPHGPPGDTDT 79 (527)
T ss_dssp EEEECTTSCEEEEEEET--TEEEEEC----TTSCEEEEEECCCBT------------CTTCHHHHTTSSSCCSSCBCCCE
T ss_pred EEEEEcCCCCEEEEEEe--ceEEEeC----CCcceeeEEEeCCcC------------CCCCcCchhcccCCCCCccccce
Confidence 34566889999999987 5576665 246777777776311 112222 222223322 00001
Q ss_pred ceEEEccCCCEEEEEeCCCcc
Q 031020 83 QMIQLSLDGKRLYVTNSLFSA 103 (167)
Q Consensus 83 ~~~~LS~DGkrLyVaNsl~s~ 103 (167)
..+.|.+.+.+|||+=++|.+
T Consensus 80 kiLll~~~~~~Li~CGSafqg 100 (527)
T 4fww_A 80 KVLVLDPALPALVSCGSSLQG 100 (527)
T ss_dssp EEEEEETTTTEEEEEESSGGG
T ss_pred EEEEEecCCCEEEEEeCCCCc
Confidence 225678899999999876653
No 309
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=52.92 E-value=1.1e+02 Score=28.41 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=28.6
Q ss_pred CceeEEEEecCCCE---EEEEeC-CCCcEEEEeccCCCCCeEEEEEE
Q 031020 3 GLITDFLISLDDRF---LYFSNW-LHGDIRQYNIEDPKNPVLTGQIW 45 (167)
Q Consensus 3 ~l~tdI~IS~DdRf---LYVSnw-~hg~I~qyDIsdp~~pklvg~v~ 45 (167)
+.++|+-+ ++.+ ||..-+ +-..+...||++|.+|++.=++.
T Consensus 140 p~~~Dv~~--~g~wrtvLvggmg~GG~~~yALDVT~P~~p~~LWe~~ 184 (570)
T 3hx6_A 140 PVVADAFF--GGAWHTVLIGSLRAGGKGLFALDVTDPANIKLLWEIG 184 (570)
T ss_dssp CEEEEEEE--TTEEEEEEEEECTTSCSEEEEEECSSGGGCEEEEEEE
T ss_pred CEEEEEEe--CCcceEEEEEecCCCCcEEEEEECCCCCCCceeEEEC
Confidence 34566655 3433 666644 44578999999999999887766
No 310
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=50.58 E-value=8.3 Score=31.70 Aligned_cols=7 Identities=29% Similarity=0.491 Sum_probs=4.5
Q ss_pred CEEEEEe
Q 031020 92 KRLYVTN 98 (167)
Q Consensus 92 krLyVaN 98 (167)
.++|+++
T Consensus 174 ~~v~~~~ 180 (369)
T 2hz6_A 174 MSHFVSN 180 (369)
T ss_dssp CCEEEEE
T ss_pred ceEEEEC
Confidence 5677765
No 311
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=47.73 E-value=1.2e+02 Score=27.95 Aligned_cols=17 Identities=18% Similarity=0.118 Sum_probs=14.2
Q ss_pred eEEEEecCCCEEEEEeC
Q 031020 6 TDFLISLDDRFLYFSNW 22 (167)
Q Consensus 6 tdI~IS~DdRfLYVSnw 22 (167)
-+|.++|.+..+|+++-
T Consensus 387 Egi~~~p~~g~vY~a~T 403 (592)
T 3zwu_A 387 EWIVVSPKDGQVYCTLT 403 (592)
T ss_dssp EEEEECTTTCCEEEEEC
T ss_pred ceeEEcCCCCEEEEEec
Confidence 47889998889999854
No 312
>1ywy_A Hypothetical protein PA2021; PAT85, NESG, GFT-structural genomics, PSI, protein STRU initiative, northeast structural genomics consortium; NMR {Pseudomonas aeruginosa} SCOP: b.55.2.1
Probab=46.81 E-value=8.3 Score=27.15 Aligned_cols=17 Identities=35% Similarity=0.641 Sum_probs=15.2
Q ss_pred CceEEEccCCCEEEEEe
Q 031020 82 PQMIQLSLDGKRLYVTN 98 (167)
Q Consensus 82 P~~~~LS~DGkrLyVaN 98 (167)
-+|-.+-.+|+|+|+|-
T Consensus 36 ~~MSv~~l~g~Rv~ItE 52 (74)
T 1ywy_A 36 ARLSVLYIDGKRLHISE 52 (74)
T ss_dssp TTEEEEEETTCCEECCH
T ss_pred HceEEEEEcCcEEeccH
Confidence 68999999999999975
No 313
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.10 E-value=1.8e+02 Score=27.79 Aligned_cols=32 Identities=9% Similarity=0.172 Sum_probs=25.4
Q ss_pred ecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEe
Q 031020 11 SLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 46 (167)
Q Consensus 11 S~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~ 46 (167)
..|++||++=|..| .++.|++.. .+++....+
T Consensus 228 ~~~~~fLftL~~Dh-~LRiWsL~t---~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQNC-HLKIWDLTS---FTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEETTC-EEEEEETTT---TEEEEEEET
T ss_pred ccCCcEEEEEEcCC-eEEEEEcCC---CceEEeecc
Confidence 56799999999876 999999875 566666555
No 314
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=44.62 E-value=1.5e+02 Score=26.69 Aligned_cols=47 Identities=11% Similarity=0.173 Sum_probs=27.8
Q ss_pred eEEEccCCCEEEEEeCCCccccccccccccccCcEEEEEEeeCCCCCee
Q 031020 84 MIQLSLDGKRLYVTNSLFSAWDCQFYPELKEKGSHMLQIDVNSEKGGMA 132 (167)
Q Consensus 84 ~~~LS~DGkrLyVaNsl~s~wD~Qfyp~~~~~g~~~~~~dvD~~~G~l~ 132 (167)
.+++.++..+||+...=-++|....-|.--.-...++.+|. +||+++
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~--~TG~~~ 291 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDA--DTGEAK 291 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEET--TTCCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeC--CCCcee
Confidence 35777889999998765555655442221111245665555 677763
No 315
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=42.75 E-value=1.1e+02 Score=27.54 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=13.1
Q ss_pred EEEEecCCCEEEEEeC
Q 031020 7 DFLISLDDRFLYFSNW 22 (167)
Q Consensus 7 dI~IS~DdRfLYVSnw 22 (167)
.+.++++...||+..-
T Consensus 234 ~~a~d~~~~~vy~~~~ 249 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTG 249 (668)
T ss_dssp CEEEETTTTEEEEECC
T ss_pred ceEEcCCCCEEEEeCC
Confidence 4788899999999863
No 316
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=39.15 E-value=53 Score=26.80 Aligned_cols=30 Identities=10% Similarity=0.196 Sum_probs=21.7
Q ss_pred CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEe
Q 031020 13 DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWV 46 (167)
Q Consensus 13 DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~ 46 (167)
++..||+++. .|.|..||..+ .++.=+...
T Consensus 8 ~~~~v~~gs~-dg~v~a~d~~t---G~~~W~~~~ 37 (369)
T 2hz6_A 8 PETLLFVSTL-DGSLHAVSKRT---GSIKWTLKE 37 (369)
T ss_dssp CTTEEEEEET-TSEEEEEETTT---CCEEEEEEC
T ss_pred eCCEEEEEcC-CCEEEEEECCC---CCEEEEecC
Confidence 7889999985 67899999654 555544444
No 317
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=38.47 E-value=1e+02 Score=27.88 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=26.3
Q ss_pred EEecCCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCc
Q 031020 9 LISLDDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGG 48 (167)
Q Consensus 9 ~IS~DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG 48 (167)
.++..+..||+.+ ..|.|+.||.. +.|+.-+..++.
T Consensus 481 ~~~tagglvf~gt-~dg~l~a~D~~---tG~~lw~~~~~~ 516 (689)
T 1yiq_A 481 TLSTAGNLVFEGS-ADGRVIAYAAD---TGEKLWEQPAAS 516 (689)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETT---TCCEEEEEECSS
T ss_pred cceECCCEEEEEC-CCCcEEEEECC---CCccceeeeCCC
Confidence 4556777888876 57889999854 477777777765
No 318
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=37.90 E-value=98 Score=27.49 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=11.4
Q ss_pred EEEecCCCEEEEEe
Q 031020 8 FLISLDDRFLYFSN 21 (167)
Q Consensus 8 I~IS~DdRfLYVSn 21 (167)
++++|+.+.+|+..
T Consensus 417 ~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 417 MAYSQDTGLFYVPA 430 (582)
T ss_dssp CEECTTTCCEEEEE
T ss_pred ceECCCCCEEEEec
Confidence 56788889999975
No 319
>1fgl_B HIV-1 GAG protein; cyclophilin, binding protein for cyclosporin A, AIDS, isomer peptide complex; 1.80A {Human immunodeficiency virus type 1}
Probab=36.10 E-value=13 Score=21.24 Aligned_cols=18 Identities=44% Similarity=0.746 Sum_probs=15.0
Q ss_pred CCCCcceeeeecCCCCcCccc
Q 031020 145 PDGPALAHEMRYPGGDCTSDI 165 (167)
Q Consensus 145 p~gp~~~he~r~pggdctsd~ 165 (167)
+-||.-+-+||-|.| |||
T Consensus 7 ~agp~p~gq~R~P~G---sDI 24 (26)
T 1fgl_B 7 HAGPIAPGQLREPRG---SDI 24 (26)
T ss_pred cCCCCCCCCccCCCc---ccc
Confidence 468888999999999 565
No 320
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.68 E-value=23 Score=33.11 Aligned_cols=22 Identities=23% Similarity=0.335 Sum_probs=18.4
Q ss_pred eeEEEEecCCCEEEEEeCCCCc
Q 031020 5 ITDFLISLDDRFLYFSNWLHGD 26 (167)
Q Consensus 5 ~tdI~IS~DdRfLYVSnw~hg~ 26 (167)
++.|.+|||+|.|||+.-.-|+
T Consensus 533 pnGiafSPD~ktLfV~vQHPGe 554 (592)
T 4a9v_A 533 VTGISFSPDQKTLFVGIQHPGE 554 (592)
T ss_dssp EEEEEECTTSSEEEEEEESTTT
T ss_pred ccCCEECCCCCEEEEEEeCCCC
Confidence 6899999999999999654443
No 321
>3ks7_A Putative putative pngase F; putative peptide:N-glycosidase F (pngase F), structural GENO joint center for structural genomics; 2.30A {Bacteroides fragilis nctc 9343}
Probab=31.42 E-value=53 Score=29.45 Aligned_cols=37 Identities=30% Similarity=0.533 Sum_probs=31.0
Q ss_pred CCCEEEEEeCCCCcEEEEeccCCCCCeEEEEEEeCcee
Q 031020 13 DDRFLYFSNWLHGDIRQYNIEDPKNPVLTGQIWVGGLF 50 (167)
Q Consensus 13 DdRfLYVSnw~hg~I~qyDIsdp~~pklvg~v~~GG~~ 50 (167)
-+|=+|+=.|..+-.+++|||| -.|-|.|.+.+|..+
T Consensus 155 k~~pvyi~~W~d~v~W~qDITd-L~pLL~Gev~iGi~i 191 (397)
T 3ks7_A 155 KRRPVYIPKWESNVTWQQDITD-LYPLLEGEAYVGIYI 191 (397)
T ss_dssp TTSCTTCCCCCSCEEEEEECGG-GGGGTBEEEEEEEEE
T ss_pred cCCcccccccccCceEEeEchh-hHHhhCCCeEEEEEe
Confidence 3578899999999999999996 667888999887533
No 322
>1ym0_B Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=31.19 E-value=14 Score=21.08 Aligned_cols=10 Identities=50% Similarity=1.295 Sum_probs=8.0
Q ss_pred eecCCCCcCc
Q 031020 154 MRYPGGDCTS 163 (167)
Q Consensus 154 ~r~pggdcts 163 (167)
+-||||-|--
T Consensus 4 vwypggqcgv 13 (27)
T 1ym0_B 4 VWYPGGQCGV 13 (27)
T ss_dssp CSCTTSCCSC
T ss_pred eeccCCcccc
Confidence 4699999963
No 323
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A
Probab=25.92 E-value=20 Score=31.80 Aligned_cols=15 Identities=40% Similarity=1.001 Sum_probs=10.5
Q ss_pred eeeeecCCCCcCcccc
Q 031020 151 AHEMRYPGGDCTSDIW 166 (167)
Q Consensus 151 ~he~r~pggdctsd~~ 166 (167)
+.=+||||| |-+|.|
T Consensus 65 ~~~lR~PGG-~~~~~y 79 (496)
T 2vrq_A 65 IPVLRWPGG-CFADEY 79 (496)
T ss_dssp CCEEEESCS-GGGGTC
T ss_pred CCeEEeCCC-ccccce
Confidence 456999987 556554
No 324
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=25.39 E-value=29 Score=23.73 Aligned_cols=15 Identities=20% Similarity=0.428 Sum_probs=11.7
Q ss_pred EEEecCCCEEEEEeC
Q 031020 8 FLISLDDRFLYFSNW 22 (167)
Q Consensus 8 I~IS~DdRfLYVSnw 22 (167)
+.+++||+++|||--
T Consensus 13 ~v~d~~G~i~yvn~~ 27 (111)
T 2vlg_A 13 AVLASNGRIIYISAN 27 (111)
T ss_dssp EEECTTSBEEEECTT
T ss_pred EEEcCCCeEEEEChH
Confidence 356789999999854
No 325
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=22.41 E-value=3.1e+02 Score=24.66 Aligned_cols=23 Identities=17% Similarity=0.391 Sum_probs=13.1
Q ss_pred CCCceEEEccCCCEEEEEeCCCccc
Q 031020 80 GGPQMIQLSLDGKRLYVTNSLFSAW 104 (167)
Q Consensus 80 g~P~~~~LS~DGkrLyVaNsl~s~w 104 (167)
+.| +..+.|||...+..+-+--|
T Consensus 518 ~~P--~~y~~~G~qyv~~~~G~g~~ 540 (599)
T 1w6s_A 518 GYP--MTYTHKGTQYVAIYYGVGGW 540 (599)
T ss_dssp SCC--EEEEETTEEEEEEEECCCTT
T ss_pred ecc--EEEEeCCEEEEEEEccCCcc
Confidence 446 44467887666666554444
No 326
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=21.96 E-value=4.1e+02 Score=23.42 Aligned_cols=11 Identities=9% Similarity=0.335 Sum_probs=7.5
Q ss_pred ccCcEEEEEEe
Q 031020 114 EKGSHMLQIDV 124 (167)
Q Consensus 114 ~~g~~~~~~dv 124 (167)
..|+.++.|-+
T Consensus 569 ~~g~~~~~f~l 579 (582)
T 1flg_A 569 AQGGSFWVFKL 579 (582)
T ss_dssp CCCCEEEEEEC
T ss_pred CCCCEEEEEeC
Confidence 45777777765
Done!