BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031023
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SM57|OEP21_PEA Outer envelope pore protein 21, chloroplastic OS=Pisum sativum
GN=OEP21 PE=1 SV=1
Length = 177
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 141/177 (79%), Gaps = 10/177 (5%)
Query: 1 METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFYPDLSAS 60
METSLRYG DSKAL+I+AKEK+ ID+NT QV G LDT+ G PS SA+IRHFYP+ SA+
Sbjct: 1 METSLRYGGDSKALKIHAKEKLRIDTNTFFQVRGGLDTKTGQPSSGSALIRHFYPNFSAT 60
Query: 61 FGLGVQYDK----------HEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKS 110
G+GV+YDK ++KLRYTV KK FPVT+ GL++F IKG C+VD++FK+ KS
Sbjct: 61 LGVGVRYDKQDSVGVRYAKNDKLRYTVLAKKTFPVTNDGLVNFKIKGGCDVDQDFKEWKS 120
Query: 111 RGAAEFSWSIFNFQKDQDVRFKLGYEVVDKVPYMQIRENNWTVNADANGRWNVRYDL 167
RG AEFSW++FNFQKDQDVR ++GYE ++VPY+QIRENNWT NAD GRWNVRYDL
Sbjct: 121 RGGAEFSWNVFNFQKDQDVRLRIGYEAFEQVPYLQIRENNWTFNADYKGRWNVRYDL 177
>sp|Q9FPG2|OP21B_ARATH Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis
thaliana GN=OEP21B PE=1 SV=1
Length = 167
Score = 239 bits (609), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 137/167 (82%)
Query: 1 METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFYPDLSAS 60
METS+RY +SK+++I+AKEK+P++S T LQ+HGELDT GAPSY AMIRHF+P+ S
Sbjct: 1 METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEASTG 60
Query: 61 FGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSWSI 120
G+G+ YDK +KLR VRGKK FPV + ++FNIKGRC++D++ Q+ +GAAEF+W+I
Sbjct: 61 LGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAWNI 120
Query: 121 FNFQKDQDVRFKLGYEVVDKVPYMQIRENNWTVNADANGRWNVRYDL 167
+F++DQDVR K+GYE+ DKVPYMQIRENNWT+NA+ G+WN+RYDL
Sbjct: 121 MDFKEDQDVRIKVGYEMFDKVPYMQIRENNWTLNANMKGKWNLRYDL 167
>sp|Q6ID99|OP21A_ARATH Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis
thaliana GN=OEP21A PE=2 SV=1
Length = 167
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 134/167 (80%)
Query: 1 METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFYPDLSAS 60
METSLRY +S++L+I+AKEK P++S TRLQ+HGELDT G PSY AMIR+F+ + S +
Sbjct: 1 METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEASTN 60
Query: 61 FGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSWSI 120
G+G+ YDK EKLR VRGKK FPV + +++FNIKGRC+ D++ QR ++GAAEF W+I
Sbjct: 61 LGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDWNI 120
Query: 121 FNFQKDQDVRFKLGYEVVDKVPYMQIRENNWTVNADANGRWNVRYDL 167
+ FQKDQD+R ++GYE+ +KVPYMQIRENNWT N + G+WNVRYDL
Sbjct: 121 WKFQKDQDLRLRIGYEMFEKVPYMQIRENNWTFNTNLKGKWNVRYDL 167
>sp|Q6K965|OEP21_ORYSJ Outer envelope pore protein 21, chloroplastic OS=Oryza sativa
subsp. japonica GN=OEP21 PE=2 SV=1
Length = 185
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 18/185 (9%)
Query: 1 METSLRY--------GKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRH 52
METSLR K + LRI+AKEK+PI SN LQ HGE+ GAP+Y++ + R+
Sbjct: 1 METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60
Query: 53 FYPDLSASFGLG--VQYDKHEKL-------RYTVRGKK-VFPVTSTGLLSFNIKGRCEVD 102
FYP LSA+ GLG + + ++ L YT+R K + P S LL N+KGR D
Sbjct: 61 FYPRLSANLGLGLAIHFRNNQPLPLAWDNFSYTLRASKAIIPFPSNALLGINLKGRLLAD 120
Query: 103 KEFKQRKSRGAAEFSWSIFNFQKDQDVRFKLGYEVVDKVPYMQIRENNWTVNADANGRWN 162
K F A E +W+I + ++ QDVR KLGY+++ K+PY Q+RENNWT NA +G+W+
Sbjct: 121 KYFNPTARTAAVELAWTILDLKRGQDVRLKLGYQLLHKMPYFQLRENNWTFNAYMDGKWD 180
Query: 163 VRYDL 167
VR+DL
Sbjct: 181 VRFDL 185
>sp|B8AFI8|OEP21_ORYSI Outer envelope pore protein 21, chloroplastic OS=Oryza sativa
subsp. indica GN=OEP21 PE=3 SV=1
Length = 185
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 18/185 (9%)
Query: 1 METSLRY--------GKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRH 52
METSLR K + LRI+AKEK+PI SN LQ HGE+ GAP+Y++ + R+
Sbjct: 1 METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60
Query: 53 FYPDLSASFGLG--VQYDKHEKL-------RYTVRGKK-VFPVTSTGLLSFNIKGRCEVD 102
FYP LSA+ GLG + + ++ L YT+R K + P S LL N+KGR D
Sbjct: 61 FYPRLSANLGLGLAIHFRNNQPLPLAWDNFSYTLRASKAIIPFPSNALLGINLKGRLLAD 120
Query: 103 KEFKQRKSRGAAEFSWSIFNFQKDQDVRFKLGYEVVDKVPYMQIRENNWTVNADANGRWN 162
K F A E +W+I + ++ QDVR KLGY+++ K+PY Q+RENNWT NA +G+W+
Sbjct: 121 KYFNPTTRTAAVELAWTILDLKRGQDVRLKLGYQLLHKMPYFQLRENNWTFNAYMDGKWD 180
Query: 163 VRYDL 167
VR+DL
Sbjct: 181 VRFDL 185
>sp|P38138|GLU2A_YEAST Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ROT2 PE=1 SV=1
Length = 954
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 56 DLSASFGLGVQYDKHEKLRYTVRGKKVFPVTSTGLL----SFNIKGRCEVDKEFKQRKSR 111
D++ F + + + +R+T+ K+ P S+GLL FN + DK+F++ +R
Sbjct: 84 DIAVQFPFSLSFLQDHSVRFTINEKERMPTNSSGLLISSQRFNETWKYAFDKKFQEEANR 143
Query: 112 GA 113
+
Sbjct: 144 TS 145
>sp|B1WYU1|SYE_CYAA5 Glutamate--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142)
GN=gltX PE=3 SV=1
Length = 484
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 99 CEVDKEFK-QRKSRGAAEFSWSIFNFQKDQDVRFKLGYEVVD-KVPYMQIRENNWTVNAD 156
E ++F +R ++ A+F W ++ Q V G E+VD VPY Q E + +N D
Sbjct: 295 TEAAQQFSLERVNKAGAKFDWDKLDWINSQYVHKMSGEELVDLLVPYWQ--EAGYPINID 352
Query: 157 ANGRW 161
++ W
Sbjct: 353 SDRPW 357
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,290,248
Number of Sequences: 539616
Number of extensions: 2423876
Number of successful extensions: 4337
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4328
Number of HSP's gapped (non-prelim): 10
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)