BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031027
MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL
KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK
LSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQPSI

High Scoring Gene Products

Symbol, full name Information P value
AT1G70770 protein from Arabidopsis thaliana 6.9e-33
AT3G11880 protein from Arabidopsis thaliana 7.4e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031027
        (167 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013955 - symbol:AT1G70770 "AT1G70770" species...   364  6.9e-33   1
TAIR|locus:2081566 - symbol:AT3G11880 "AT3G11880" species...   250  7.4e-21   1


>TAIR|locus:2013955 [details] [associations]
            symbol:AT1G70770 "AT1G70770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
            "membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
            apparatus" evidence=IDA] [GO:0006007 "glucose catabolic process"
            evidence=RCA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
            [GO:0009651 "response to salt stress" evidence=RCA] [GO:0030968
            "endoplasmic reticulum unfolded protein response" evidence=RCA]
            GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0009506 GO:GO:0005634 GO:GO:0005794 GO:GO:0005774
            EMBL:AC011663 EMBL:AC008148 InterPro:IPR019308 PANTHER:PTHR13448
            Pfam:PF10151 UniGene:At.48357 UniGene:At.70098 EMBL:AY136430
            EMBL:BT008378 EMBL:AK318674 IPI:IPI00544310 PIR:C96732
            RefSeq:NP_001185367.1 RefSeq:NP_177234.1 PaxDb:Q9S791 PRIDE:Q9S791
            ProMEX:Q9S791 DNASU:843414 EnsemblPlants:AT1G70770.1
            EnsemblPlants:AT1G70770.2 GeneID:843414 KEGG:ath:AT1G70770
            TAIR:At1g70770 eggNOG:NOG256194 HOGENOM:HOG000005794
            InParanoid:Q9S791 OMA:KVTYPKR PhylomeDB:Q9S791
            ProtClustDB:CLSN2682055 ArrayExpress:Q9S791 Genevestigator:Q9S791
            Uniprot:Q9S791
        Length = 610

 Score = 364 (133.2 bits), Expect = 6.9e-33, P = 6.9e-33
 Identities = 78/133 (58%), Positives = 90/133 (67%)

Query:     1 MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
             MKQV+ QI +FA+K AGE  P L+ EA  I IW +TQ+ DC KHWD LY+ NLEASV VL
Sbjct:   424 MKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVL 483

Query:    61 KKLSEEWKEHSAKLS--PLDPF--RATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKL 116
             KKL EEWKEHS KLS  P D      T+KSFR KNE+ I  T   A  SL + ADK CK 
Sbjct:   484 KKLVEEWKEHSVKLSSSPNDALTLNRTMKSFRLKNEEVI--TEGGANASLYKEADKSCKT 541

Query:   117 VSGKLSSSHGCLK 129
             +SG+LS   GCLK
Sbjct:   542 ISGRLSRGSGCLK 554


>TAIR|locus:2081566 [details] [associations]
            symbol:AT3G11880 "AT3G11880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031348 "negative regulation
            of defense response" evidence=RCA] EMBL:CP002686 InterPro:IPR019308
            PANTHER:PTHR13448 Pfam:PF10151 eggNOG:KOG4467 EMBL:AF428353
            IPI:IPI00548234 RefSeq:NP_566403.1 UniGene:At.18742
            EnsemblPlants:AT3G11880.1 GeneID:820361 KEGG:ath:AT3G11880
            Genevestigator:Q944J9 Uniprot:Q944J9
        Length = 443

 Score = 250 (93.1 bits), Expect = 7.4e-21, P = 7.4e-21
 Identities = 62/155 (40%), Positives = 83/155 (53%)

Query:     1 MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
             MKQV+ QI  +++  AG     L+ EA  I +W LT++ DC K W+KLY  N EASV VL
Sbjct:   293 MKQVTQQIFHYSLIIAGRRNLVLAKEATAIAVWSLTENVDCCKQWEKLYWENKEASVAVL 352

Query:    61 KKLSEEWKEHSAKL--SPLDPF--RATLKSFRQKNEKGI--GGTADAARQSLLRNADKYC 114
             KKL +E  + S KL  SP   F    T++S R KNEK I  GGT      S  + ADK C
Sbjct:   353 KKLVDERGDISIKLASSPSHKFTLNQTMESIRLKNEKAITEGGTIG----SRYKEADKSC 408

Query:   115 KLVSGKLSSSHGCLKSXXXXXXXXXXXXXFMSPNV 149
             K++SG+    + CLK               ++ N+
Sbjct:   409 KVMSGRFFPENACLKGTAIITAVVLAAVAVLASNL 443


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.129   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      167       154   0.00088  105 3  11 22  0.37    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  158 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.46u 0.08s 14.54t   Elapsed:  00:00:02
  Total cpu time:  14.46u 0.08s 14.54t   Elapsed:  00:00:02
  Start:  Fri May 10 08:20:46 2013   End:  Fri May 10 08:20:48 2013

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