Query 031029
Match_columns 167
No_of_seqs 123 out of 834
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 08:10:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031029.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031029hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03629 DUF303: Domain of unk 100.0 6.9E-39 1.5E-43 258.0 16.8 147 2-162 73-255 (255)
2 cd01836 FeeA_FeeB_like SGNH_hy 99.0 6.9E-08 1.5E-12 73.7 16.4 142 3-160 29-190 (191)
3 cd04502 SGNH_hydrolase_like_7 99.0 4.2E-08 9.1E-13 73.8 14.2 127 18-158 25-170 (171)
4 cd01832 SGNH_hydrolase_like_1 98.9 4.2E-08 9E-13 74.3 13.5 140 3-158 25-185 (185)
5 cd01833 XynB_like SGNH_hydrola 98.9 5E-08 1.1E-12 72.2 13.3 125 30-158 17-156 (157)
6 cd01822 Lysophospholipase_L1_l 98.8 3.2E-07 6.9E-12 68.8 14.1 131 13-159 34-176 (177)
7 cd01827 sialate_O-acetylestera 98.8 5.4E-07 1.2E-11 68.4 15.1 149 2-159 21-187 (188)
8 cd01834 SGNH_hydrolase_like_2 98.8 1.4E-07 3.1E-12 71.2 11.5 141 4-158 22-191 (191)
9 cd01841 NnaC_like NnaC (CMP-Ne 98.8 4.3E-07 9.3E-12 68.3 13.5 130 14-157 22-172 (174)
10 cd01828 sialate_O-acetylestera 98.7 5.6E-07 1.2E-11 67.4 13.6 129 16-159 22-168 (169)
11 PRK10528 multifunctional acyl- 98.7 2.6E-07 5.5E-12 71.3 11.8 133 18-166 46-190 (191)
12 cd01839 SGNH_arylesterase_like 98.7 6.2E-07 1.3E-11 69.5 13.6 154 5-161 29-207 (208)
13 cd04501 SGNH_hydrolase_like_4 98.7 8.9E-07 1.9E-11 67.1 13.6 128 15-158 31-182 (183)
14 cd01831 Endoglucanase_E_like E 98.6 2.5E-06 5.4E-11 64.2 14.9 105 53-159 53-168 (169)
15 cd01838 Isoamyl_acetate_hydrol 98.6 8.7E-07 1.9E-11 67.3 12.5 142 2-158 20-198 (199)
16 cd01820 PAF_acetylesterase_lik 98.6 2.5E-06 5.3E-11 66.7 14.6 107 54-162 88-213 (214)
17 cd01844 SGNH_hydrolase_like_6 98.6 1.7E-06 3.8E-11 65.5 12.7 134 3-158 22-176 (177)
18 cd00229 SGNH_hydrolase SGNH_hy 98.6 2.1E-06 4.5E-11 62.6 12.6 134 12-157 32-186 (187)
19 cd01821 Rhamnogalacturan_acety 98.6 9.3E-07 2E-11 68.0 10.9 143 2-158 22-197 (198)
20 cd01825 SGNH_hydrolase_peri1 S 98.5 7.1E-06 1.5E-10 62.0 14.8 138 15-162 24-188 (189)
21 cd01830 XynE_like SGNH_hydrola 98.4 1.1E-05 2.5E-10 62.4 14.2 144 4-156 28-201 (204)
22 cd01835 SGNH_hydrolase_like_3 98.2 6.6E-05 1.4E-09 57.3 13.9 141 3-156 23-190 (193)
23 cd01840 SGNH_hydrolase_yrhL_li 98.2 3.4E-05 7.4E-10 57.1 11.4 129 3-158 13-149 (150)
24 cd01829 SGNH_hydrolase_peri2 S 98.1 9.4E-05 2E-09 56.6 12.4 136 14-160 25-199 (200)
25 cd04506 SGNH_hydrolase_YpmR_li 98.0 9.8E-05 2.1E-09 56.8 10.2 134 12-157 34-203 (204)
26 PF14606 Lipase_GDSL_3: GDSL-l 97.9 3.4E-05 7.4E-10 59.4 6.1 85 73-159 72-177 (178)
27 PF13472 Lipase_GDSL_2: GDSL-l 97.9 0.00015 3.2E-09 53.2 9.0 135 2-151 18-179 (179)
28 COG2755 TesA Lysophospholipase 97.5 0.0075 1.6E-07 46.6 13.9 110 56-165 78-214 (216)
29 cd01823 SEST_like SEST_like. A 97.4 0.0024 5.2E-08 50.9 10.9 96 2-105 33-155 (259)
30 cd01826 acyloxyacyl_hydrolase_ 95.7 0.14 3E-06 42.7 10.0 47 58-106 126-179 (305)
31 cd01824 Phospholipase_B_like P 95.1 0.3 6.4E-06 40.3 10.0 48 55-104 119-172 (288)
32 cd01842 SGNH_hydrolase_like_5 94.1 0.12 2.6E-06 39.8 5.1 83 73-157 70-180 (183)
33 COG2845 Uncharacterized protei 93.7 0.92 2E-05 38.2 9.9 104 54-161 176-319 (354)
34 KOG3035 Isoamyl acetate-hydrol 87.7 3.7 8.1E-05 32.8 7.6 105 55-161 68-210 (245)
35 cd02876 GH18_SI-CLP Stabilin-1 73.3 20 0.00043 29.6 7.5 92 6-105 59-155 (318)
36 PF00657 Lipase_GDSL: GDSL-lik 69.3 3.7 8.1E-05 31.0 2.2 77 13-93 38-126 (234)
37 PLN03156 GDSL esterase/lipase; 68.5 5.5 0.00012 33.7 3.2 26 138-163 325-350 (351)
38 PF05704 Caps_synth: Capsular 59.3 13 0.00029 30.4 3.7 39 54-103 45-83 (276)
39 cd06548 GH18_chitinase The GH1 55.8 96 0.0021 25.6 8.4 85 6-94 77-167 (322)
40 PRK09919 anti-adapter protein 52.9 9.1 0.0002 27.4 1.5 53 55-118 26-81 (114)
41 cd01847 Triacylglycerol_lipase 52.7 12 0.00026 30.1 2.5 20 138-157 260-279 (281)
42 cd02873 GH18_IDGF The IDGF's ( 50.3 1.1E+02 0.0023 26.5 8.1 20 76-95 166-185 (413)
43 PRK15381 pathogenicity island 49.2 20 0.00042 31.3 3.3 26 138-163 380-405 (408)
44 PF14331 ImcF-related_N: ImcF- 47.5 66 0.0014 26.0 6.0 65 36-103 8-76 (266)
45 PF12641 Flavodoxin_3: Flavodo 45.0 1.3E+02 0.0028 22.5 7.9 54 7-68 61-114 (160)
46 PF12997 DUF3881: Domain of un 43.9 11 0.00024 31.2 0.9 12 53-64 272-283 (283)
47 cd01846 fatty_acyltransferase_ 43.3 18 0.00039 28.7 2.1 98 4-106 42-155 (270)
48 cd02879 GH18_plant_chitinase_c 40.4 1.9E+02 0.0041 23.7 7.8 81 3-93 56-140 (299)
49 PF09292 Neil1-DNA_bind: Endon 39.7 14 0.0003 21.1 0.7 9 58-66 26-34 (39)
50 cd01837 SGNH_plant_lipase_like 37.4 22 0.00047 29.2 1.7 19 138-156 294-312 (315)
51 KOG0564 5,10-methylenetetrahyd 36.4 97 0.0021 28.0 5.6 79 78-166 193-272 (590)
52 PF11202 PRTase_1: Phosphoribo 35.3 32 0.0007 28.0 2.3 79 3-93 76-175 (257)
53 PF14987 NADHdh_A3: NADH dehyd 34.3 51 0.0011 22.0 2.8 42 3-44 5-47 (84)
54 PF14606 Lipase_GDSL_3: GDSL-l 32.8 40 0.00087 25.9 2.4 22 2-23 82-103 (178)
55 cd00598 GH18_chitinase-like Th 32.3 2.1E+02 0.0047 21.3 9.9 83 6-94 57-139 (210)
56 PRK12465 xylose isomerase; Pro 31.3 1.8E+02 0.0038 25.7 6.3 75 24-100 70-146 (445)
57 TIGR01624 LRP1_Cterm LRP1 C-te 31.2 32 0.00069 20.8 1.3 13 52-64 37-49 (50)
58 COG3946 VirJ Type IV secretory 29.9 3.2E+02 0.0069 24.2 7.6 84 14-107 247-336 (456)
59 PF03652 UPF0081: Uncharacteri 29.3 52 0.0011 23.9 2.5 21 2-22 76-96 (135)
60 COG1519 KdtA 3-deoxy-D-manno-o 29.1 1.5E+02 0.0032 26.0 5.5 89 12-108 145-243 (419)
61 PF08885 GSCFA: GSCFA family; 28.7 3.2E+02 0.0069 22.1 8.9 80 73-155 146-251 (251)
62 PLN02298 hydrolase, alpha/beta 27.5 1.6E+02 0.0036 23.7 5.4 54 53-106 87-143 (330)
63 TIGR01838 PHA_synth_I poly(R)- 27.2 3E+02 0.0064 24.9 7.3 82 12-105 187-270 (532)
64 COG4124 ManB Beta-mannanase [C 26.6 4.1E+02 0.009 22.8 7.6 65 36-100 158-228 (355)
65 cd06906 M14_Nna1 Peptidase M14 26.3 1.1E+02 0.0024 25.3 4.1 24 138-161 255-278 (278)
66 KOG2749 mRNA cleavage and poly 25.9 1.5E+02 0.0032 25.8 4.8 67 12-89 141-239 (415)
67 smart00636 Glyco_18 Glycosyl h 25.7 3.7E+02 0.008 21.9 7.5 80 6-94 59-141 (334)
68 cd06544 GH18_narbonin Narbonin 24.8 3.7E+02 0.008 21.6 9.3 76 6-93 63-143 (253)
69 cd06907 M14_AGBL2-3_like Pepti 24.5 86 0.0019 25.6 3.1 23 139-161 237-259 (261)
70 PF12122 DUF3582: Protein of u 23.9 2.3E+02 0.005 19.6 4.8 64 2-69 15-79 (101)
71 PF02784 Orn_Arg_deC_N: Pyrido 23.2 3.2E+02 0.007 21.4 6.2 46 53-102 154-202 (251)
72 PRK12311 rpsB 30S ribosomal pr 21.3 5E+02 0.011 22.0 7.1 47 112-162 166-219 (326)
73 cd06908 M14_AGBL4_like Peptida 20.9 1E+02 0.0023 25.0 2.9 21 141-161 239-259 (261)
74 COG0429 Predicted hydrolase of 20.1 67 0.0015 27.4 1.7 31 3-33 137-167 (345)
No 1
>PF03629 DUF303: Domain of unknown function (DUF303) ; InterPro: IPR005181 This domain is associated with proteins from viruses, bacteria and eukaryotes. In the latter two taxonomic groups some of the proteins are annotated as either sialic acid-specific 9-O-acetylesterase (3.1.1.53 from EC) or acetylxylan esterase related enzyme. The function of this domain is unknown.; PDB: 3PT5_A 2APJ_C 1ZMB_D.
Probab=100.00 E-value=6.9e-39 Score=257.98 Aligned_cols=147 Identities=39% Similarity=0.580 Sum_probs=120.0
Q ss_pred chHHHHHhhcCCCeEEEEecCcccccccccccCc------------------------hhHHHHHHHHHHhhhccCCeee
Q 031029 2 SFANAVVARAEGERVGLVPCAVGGTAIKEWARGE------------------------ELYESMVARSKESVNKSGGRIK 57 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~------------------------~ly~~~i~~~~~al~~~~~~i~ 57 (167)
.||++|.++ .++|||||+||+|||+|+.|.++. .+|+.|+.+++ ++ +++
T Consensus 73 ~F~~~l~~~-~~~pVglI~~a~GGt~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~i~~~~-~~-----~i~ 145 (255)
T PF03629_consen 73 YFGKELQKA-LGVPVGLINCAWGGTSIEAWMPGESLEWDPELKAWLYKTYAQNKGYPGALYNAMIAPLK-AY-----GIK 145 (255)
T ss_dssp HHHHHHHHC-CTCEEEEEEEE-TT-BGGGGSTTSTTEE-TT--B-STT---------SHHHHHHHHHHH-HH-----EEE
T ss_pred HHHHHHhhc-CCCcEEEEecccCCeehhhcCCcccccccccccccccccccccchhhHHHHHHHHHHHh-cc-----ceE
Confidence 699999999 699999999999999999999876 78999999987 44 999
Q ss_pred EEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC----------cHHHHHHHHhhc--cCCC
Q 031029 58 ALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLELPSLPIIQVALASGDK----------YKEKVREAQLGI--NLQN 125 (167)
Q Consensus 58 gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~----------~~~~vr~aQ~~~--~~p~ 125 (167)
||||||||+|+ +. ..|.++|+.||++||++|+.+++||+++|++++.. .++.||+||+.+ ++||
T Consensus 146 gvlW~QGEsD~-~~---~~Y~~~l~~li~~~R~~~~~~~lPf~~~ql~~~~~~~~~~~~~~~~~~~vr~aQ~~~~~~~~~ 221 (255)
T PF03629_consen 146 GVLWYQGESDA-NA---EAYRELLKALIEDWRADWGDPDLPFVIGQLSPYNGTNNEPAGINEGWAEVREAQRRVAEEDPN 221 (255)
T ss_dssp EEEEE--GGGS-SC---TCHHHHHHHHHHHHHHHTT-TTS-EEEEE-SCCCTTCGHHCCT-TTHHHHHHHHHHHHHHSTT
T ss_pred EEEEeCCCCCC-CH---HHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcccCCCCcccccccHHHHHHHHHHHHhhCCC
Confidence 99999999999 52 39999999999999999999999999999998642 256899999986 6899
Q ss_pred eEEEeCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 031029 126 VVCVDAKGLHLKEDHLHLTTEAQVKLGHMLAEAYLKH 162 (167)
Q Consensus 126 ~~~i~~~gl~~~~d~~H~~~~g~~~lG~r~a~a~l~~ 162 (167)
+.+|++.|+. |..|+..+++++||+|||.++++.
T Consensus 222 ~~~v~t~d~~---~~~~i~~~~~~~~G~R~a~~al~~ 255 (255)
T PF03629_consen 222 TGMVSTSDLG---DPDDIHPAGKRELGERLAEAALRK 255 (255)
T ss_dssp EEEEE-TT-B----TTSS-HHHHHHHHHHHHHHHHH-
T ss_pred EEEEEccCCC---CCCCcCHHHHHHHHHHHHHHhhhC
Confidence 9999998853 555666677799999999999873
No 2
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.98 E-value=6.9e-08 Score=73.66 Aligned_cols=142 Identities=15% Similarity=0.213 Sum_probs=100.2
Q ss_pred hHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHH
Q 031029 3 FANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNME 82 (167)
Q Consensus 3 Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~ 82 (167)
+++.|.+. +..++-+++.+.+|....+ ++.+++. + .......|+.+=|-||.....+.+.|.+++.
T Consensus 29 l~~~l~~~-~~~~~~~~n~g~~G~t~~~----------~~~~l~~-~--~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~ 94 (191)
T cd01836 29 LARGLAAI-TGRGVRWRLFAKTGATSAD----------LLRQLAP-L--PETRFDVAVISIGVNDVTHLTSIARWRKQLA 94 (191)
T ss_pred HHHHHHHh-hCCceEEEEEecCCcCHHH----------HHHHHHh-c--ccCCCCEEEEEecccCcCCCCCHHHHHHHHH
Confidence 34556655 5567888999998887633 3444443 2 2357889999999999987677999999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEeeCCCC---c--------H---HHHHHHHhhc--cCCCeEEEeCCCC----CCCCCCCC
Q 031029 83 AFISNVREDLELPSLPIIQVALASGDK---Y--------K---EKVREAQLGI--NLQNVVCVDAKGL----HLKEDHLH 142 (167)
Q Consensus 83 ~li~~~R~~~~~~~lP~~~~~l~~~~~---~--------~---~~vr~aQ~~~--~~p~~~~i~~~gl----~~~~d~~H 142 (167)
.|++.+|+.. |+.+++++.+++... . . ..+.++.+++ +.+++.++|..+. ....|++|
T Consensus 95 ~li~~i~~~~--~~~~iiv~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~~id~~~~~~~~~~~~DglH 172 (191)
T cd01836 95 ELVDALRAKF--PGARVVVTAVPPLGRFPALPQPLRWLLGRRARLLNRALERLASEAPRVTLLPATGPLFPALFASDGFH 172 (191)
T ss_pred HHHHHHHhhC--CCCEEEEECCCCcccCCCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecCCccchhhccCCCCC
Confidence 9999999864 578999887754321 1 0 1223333332 3568888886432 12469999
Q ss_pred CChHHHHHHHHHHHHHHH
Q 031029 143 LTTEAQVKLGHMLAEAYL 160 (167)
Q Consensus 143 ~~~~g~~~lG~r~a~a~l 160 (167)
|+.+||+.+++.++.++.
T Consensus 173 pn~~Gy~~~a~~l~~~i~ 190 (191)
T cd01836 173 PSAAGYAVWAEALAPAIA 190 (191)
T ss_pred CChHHHHHHHHHHHHHHh
Confidence 999999999998887753
No 3
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.96 E-value=4.2e-08 Score=73.77 Aligned_cols=127 Identities=19% Similarity=0.370 Sum_probs=86.0
Q ss_pred EEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCC
Q 031029 18 LVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLELPSL 97 (167)
Q Consensus 18 lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~~~l 97 (167)
+++.+++|...+ .++.++...+. ...++-|+++-|-||.....+.+.|.+++.+|++.+|+.. |+.
T Consensus 25 v~N~Gi~G~~~~----------~~~~~~~~~~~--~~~p~~vvi~~G~ND~~~~~~~~~~~~~~~~lv~~i~~~~--~~~ 90 (171)
T cd04502 25 VVNRGFGGSTLA----------DCLHYFDRLVL--PYQPRRVVLYAGDNDLASGRTPEEVLRDFRELVNRIRAKL--PDT 90 (171)
T ss_pred eeecCcccchHH----------HHHHHHHhhhc--cCCCCEEEEEEecCcccCCCCHHHHHHHHHHHHHHHHHHC--CCC
Confidence 456666665543 34444433332 2567889999999998766679999999999999999886 578
Q ss_pred CEEEEEeeCCC-C--cHHHHHHH---Hhhc-c-CCCeEEEeC-------CCCC----CCCCCCCCChHHHHHHHHHHHHH
Q 031029 98 PIIQVALASGD-K--YKEKVREA---QLGI-N-LQNVVCVDA-------KGLH----LKEDHLHLTTEAQVKLGHMLAEA 158 (167)
Q Consensus 98 P~~~~~l~~~~-~--~~~~vr~a---Q~~~-~-~p~~~~i~~-------~gl~----~~~d~~H~~~~g~~~lG~r~a~a 158 (167)
+++++.+.+.. . ..+.+++. .+++ + ..++.++|. ++.. +..|++||+.+||+.++++++.+
T Consensus 91 ~iil~~~~p~~~~~~~~~~~~~~n~~~~~~a~~~~~v~~vD~~~~~~~~~~~~~~~~~~~DGlH~n~~Gy~~~a~~l~~~ 170 (171)
T cd04502 91 PIAIISIKPSPARWALRPKIRRFNALLKELAETRPNLTYIDVASPMLDADGKPRAELFQEDGLHLNDAGYALWRKVIKPA 170 (171)
T ss_pred cEEEEEecCCCcchhhHHHHHHHHHHHHHHHhcCCCeEEEECcHHHhCCCCCcChhhcCCCCCCCCHHHHHHHHHHHHhh
Confidence 89988875542 2 22233332 2332 2 467888773 1111 24699999999999998888765
No 4
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.93 E-value=4.2e-08 Score=74.32 Aligned_cols=140 Identities=14% Similarity=0.220 Sum_probs=93.6
Q ss_pred hHHHHHhhc--CCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCC-CCCHHHHHH
Q 031029 3 FANAVVARA--EGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDAST-DHDAEAYQQ 79 (167)
Q Consensus 3 Fa~~l~~~~--~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~-~~~~~~Y~~ 79 (167)
|...|.+.. +..++-+++.++||+.+.++. .. .+..++. ...+-|+++=|-+|... ..+++.|.+
T Consensus 25 ~~~~l~~~l~~~~~~~~~~N~g~~G~~~~~~~------~~---~~~~~~~---~~~d~vii~~G~ND~~~~~~~~~~~~~ 92 (185)
T cd01832 25 WADRLAAALAAADPGIEYANLAVRGRRTAQIL------AE---QLPAALA---LRPDLVTLLAGGNDILRPGTDPDTYRA 92 (185)
T ss_pred HHHHHHHHhcccCCCceEeeccCCcchHHHHH------HH---HHHHHHh---cCCCEEEEeccccccccCCCCHHHHHH
Confidence 455555552 124678999999999887522 11 1222232 36789999999999975 567999999
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEEEeeCC---CCc-------HHHHHHHHhhc-cCCCeEEEeCCCC-------CCCCCCC
Q 031029 80 NMEAFISNVREDLELPSLPIIQVALASG---DKY-------KEKVREAQLGI-NLQNVVCVDAKGL-------HLKEDHL 141 (167)
Q Consensus 80 ~l~~li~~~R~~~~~~~lP~~~~~l~~~---~~~-------~~~vr~aQ~~~-~~p~~~~i~~~gl-------~~~~d~~ 141 (167)
.++.||+.+|. ++.+++++.+.+. +.. ...+.++++.+ +..++.+++..+. ....|++
T Consensus 93 ~~~~~i~~i~~----~~~~vil~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~v~~vd~~~~~~~~~~~~~~~Dgi 168 (185)
T cd01832 93 DLEEAVRRLRA----AGARVVVFTIPDPAVLEPFRRRVRARLAAYNAVIRAVAARYGAVHVDLWEHPEFADPRLWASDRL 168 (185)
T ss_pred HHHHHHHHHHh----CCCEEEEecCCCccccchhHHHHHHHHHHHHHHHHHHHHHcCCEEEecccCcccCCccccccCCC
Confidence 99999999992 5677888877554 111 12344444443 3455666664222 1246999
Q ss_pred CCChHHHHHHHHHHHHH
Q 031029 142 HLTTEAQVKLGHMLAEA 158 (167)
Q Consensus 142 H~~~~g~~~lG~r~a~a 158 (167)
||+.+||..+++.++++
T Consensus 169 Hpn~~G~~~~A~~i~~~ 185 (185)
T cd01832 169 HPSAAGHARLAALVLAA 185 (185)
T ss_pred CCChhHHHHHHHHHhhC
Confidence 99999999999888753
No 5
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.92 E-value=5e-08 Score=72.19 Aligned_cols=125 Identities=21% Similarity=0.220 Sum_probs=85.1
Q ss_pred ccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC
Q 031029 30 EWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLELPSLPIIQVALASGDK 109 (167)
Q Consensus 30 ~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~ 109 (167)
++..++..-..+..++...+. ....+-|+++=|-||.....+.+.|.+.++++|+.+|+.. |+.+++++.+.+...
T Consensus 17 n~g~~G~~~~~~~~~~~~~~~--~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~i~~~~--p~~~ii~~~~~p~~~ 92 (157)
T cd01833 17 HEGHSGYLIDQIAAAAADWVL--AAKPDVVLLHLGTNDLVLNRDPDTAPDRLRALIDQMRAAN--PDVKIIVATLIPTTD 92 (157)
T ss_pred CCCCCCccHHHHHHHhhhccc--cCCCCEEEEeccCcccccCCCHHHHHHHHHHHHHHHHHhC--CCeEEEEEeCCCCCC
Confidence 333333333444444433332 3678999999999999876679999999999999999874 678888887655321
Q ss_pred -----cHHHHHHHHhhc--c----CCCeEEEeCCCC----CCCCCCCCCChHHHHHHHHHHHHH
Q 031029 110 -----YKEKVREAQLGI--N----LQNVVCVDAKGL----HLKEDHLHLTTEAQVKLGHMLAEA 158 (167)
Q Consensus 110 -----~~~~vr~aQ~~~--~----~p~~~~i~~~gl----~~~~d~~H~~~~g~~~lG~r~a~a 158 (167)
....+.++.+++ + ..++.+++.... ....|++||+.+||+.+|+.++++
T Consensus 93 ~~~~~~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 93 ASGNARIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcccccCCCCCchHHHHHHHHHHHhh
Confidence 122333333332 1 256788876332 235899999999999999998876
No 6
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.80 E-value=3.2e-07 Score=68.76 Aligned_cols=131 Identities=16% Similarity=0.230 Sum_probs=87.3
Q ss_pred CCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhC
Q 031029 13 GERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDL 92 (167)
Q Consensus 13 ~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~ 92 (167)
..++-+++.+++|..... ++.++...+.. ....-|+++=|-||.....+.+.|.++++.||+.+|+.
T Consensus 34 ~~~~~v~n~g~~G~~~~~----------~~~~l~~~~~~--~~pd~v~i~~G~ND~~~~~~~~~~~~~l~~li~~~~~~- 100 (177)
T cd01822 34 GIDVTVINAGVSGDTTAG----------GLARLPALLAQ--HKPDLVILELGGNDGLRGIPPDQTRANLRQMIETAQAR- 100 (177)
T ss_pred CCCeEEEecCcCCcccHH----------HHHHHHHHHHh--cCCCEEEEeccCcccccCCCHHHHHHHHHHHHHHHHHC-
Confidence 457888999999987642 23344433432 46789999999999876667899999999999999986
Q ss_pred CCCCCCEEEEEee-CCC-C--cHHHHHHHHhhc-cCCCeEEEeC--CC---CC--CCCCCCCCChHHHHHHHHHHHHHH
Q 031029 93 ELPSLPIIQVALA-SGD-K--YKEKVREAQLGI-NLQNVVCVDA--KG---LH--LKEDHLHLTTEAQVKLGHMLAEAY 159 (167)
Q Consensus 93 ~~~~lP~~~~~l~-~~~-~--~~~~vr~aQ~~~-~~p~~~~i~~--~g---l~--~~~d~~H~~~~g~~~lG~r~a~a~ 159 (167)
+.+++++.+. +.. + +...+.++.+++ ...++.+++. .. -+ ...|++||+.+||+.+++.+++.+
T Consensus 101 ---~~~vil~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~~~~~~~DgvHpn~~G~~~~a~~i~~~i 176 (177)
T cd01822 101 ---GAPVLLVGMQAPPNYGPRYTRRFAAIYPELAEEYGVPLVPFFLEGVAGDPELMQSDGIHPNAEGQPIIAENVWPAL 176 (177)
T ss_pred ---CCeEEEEecCCCCccchHHHHHHHHHHHHHHHHcCCcEechHHhhhhhChhhhCCCCCCcCHHHHHHHHHHHHHhh
Confidence 3566666543 211 1 334555555443 2233444431 01 01 246999999999988888887653
No 7
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.78 E-value=5.4e-07 Score=68.43 Aligned_cols=149 Identities=12% Similarity=0.117 Sum_probs=95.3
Q ss_pred chHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC--CCHHHHHH
Q 031029 2 SFANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD--HDAEAYQQ 79 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~--~~~~~Y~~ 79 (167)
+|...|.+. ++.++-+++.+++|.....=......-...+. ..+. ....-|+++=|-||.... ...+.|.+
T Consensus 21 ~~~~~l~~~-l~~~~~v~N~g~~G~t~~~~~~~~~~~~~~~~---~~~~---~~pd~Vii~~G~ND~~~~~~~~~~~~~~ 93 (188)
T cd01827 21 SYPSPLAQM-LGDGYEVGNFGKSARTVLNKGDHPYMNEERYK---NALA---FNPNIVIIKLGTNDAKPQNWKYKDDFKK 93 (188)
T ss_pred chHHHHHHH-hCCCCeEEeccCCcceeecCCCcCccchHHHH---Hhhc---cCCCEEEEEcccCCCCCCCCccHHHHHH
Confidence 366677776 66678899999999875320000001111122 2232 467899999999999753 23689999
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEEEeeCCC-C---------cHHHHHHHHhhc-cCCCeEEEeCCC----C-CCCCCCCCC
Q 031029 80 NMEAFISNVREDLELPSLPIIQVALASGD-K---------YKEKVREAQLGI-NLQNVVCVDAKG----L-HLKEDHLHL 143 (167)
Q Consensus 80 ~l~~li~~~R~~~~~~~lP~~~~~l~~~~-~---------~~~~vr~aQ~~~-~~p~~~~i~~~g----l-~~~~d~~H~ 143 (167)
+++.||+.+|+.. |+.+++++...+.. . ....+.++.+.+ ...++.+||... . .+..|++||
T Consensus 94 ~l~~li~~i~~~~--~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~vD~~~~~~~~~~~~~Dg~Hp 171 (188)
T cd01827 94 DYETMIDSFQALP--SKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLIDLHTPLKGKPELVPDWVHP 171 (188)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEEEccccccCCccccCCCCCc
Confidence 9999999999875 45677766654321 1 112344444443 345666666311 1 124699999
Q ss_pred ChHHHHHHHHHHHHHH
Q 031029 144 TTEAQVKLGHMLAEAY 159 (167)
Q Consensus 144 ~~~g~~~lG~r~a~a~ 159 (167)
+.+||+.|++.+++++
T Consensus 172 n~~G~~~~A~~i~~~i 187 (188)
T cd01827 172 NEKGAYILAKVVYKAI 187 (188)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999988765
No 8
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.77 E-value=1.4e-07 Score=71.24 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=94.0
Q ss_pred HHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC----CCHHHHHH
Q 031029 4 ANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD----HDAEAYQQ 79 (167)
Q Consensus 4 a~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~----~~~~~Y~~ 79 (167)
...|.+.+++.++-+++.+++|+...+.. ..+... + .....+-|+++-|-+|.... .+.+.|.+
T Consensus 22 ~~~l~~~~~~~~~~v~n~g~~G~t~~~~~------~~~~~~----~--~~~~~d~v~l~~G~ND~~~~~~~~~~~~~~~~ 89 (191)
T cd01834 22 ETYLAARYPELKLTFRNLGWSGDTVSDLA------ARRDRD----V--LPAKPDVVSIMFGINDSFRGFDDPVGLEKFKT 89 (191)
T ss_pred HHHHHHhCCCCCcEEEEcccCccchhhhh------hhhhcc----c--ccCCCCEEEEEeecchHhhcccccccHHHHHH
Confidence 44566666778899999999999886533 111211 1 12467899999999999863 46899999
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEEEeeCCCC--c--------HH---HHHHHHhhc-cCCCeEEEeCC-----------CC
Q 031029 80 NMEAFISNVREDLELPSLPIIQVALASGDK--Y--------KE---KVREAQLGI-NLQNVVCVDAK-----------GL 134 (167)
Q Consensus 80 ~l~~li~~~R~~~~~~~lP~~~~~l~~~~~--~--------~~---~vr~aQ~~~-~~p~~~~i~~~-----------gl 134 (167)
.++.+|+.+|+.. +..+++++...+... . .+ .+.++.+.+ +-.++.++|.. ..
T Consensus 90 ~l~~~v~~~~~~~--~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~iD~~~~~~~~~~~~~~~ 167 (191)
T cd01834 90 NLRRLIDRLKNKE--SAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFVDLFTPMKEAFQKAGEA 167 (191)
T ss_pred HHHHHHHHHHccc--CCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEEecHHHHHHHHHhCCCc
Confidence 9999999999643 567777765433211 1 11 222333332 33467777631 11
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHH
Q 031029 135 HLKEDHLHLTTEAQVKLGHMLAEA 158 (167)
Q Consensus 135 ~~~~d~~H~~~~g~~~lG~r~a~a 158 (167)
....|++||+.+||+.+++.++++
T Consensus 168 ~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 168 VLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred cccCCCCCCCHHHHHHHHHHHHhC
Confidence 125799999999999998888764
No 9
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.75 E-value=4.3e-07 Score=68.25 Aligned_cols=130 Identities=15% Similarity=0.265 Sum_probs=87.3
Q ss_pred CeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCC
Q 031029 14 ERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLE 93 (167)
Q Consensus 14 ~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~ 93 (167)
.++-+++.+++|...+ .++.++...+. ...++.|+++=|-||.....+.+.|.+++++|++.+|+..
T Consensus 22 ~~~~v~n~g~~G~t~~----------~~~~~~~~~~~--~~~pd~v~i~~G~ND~~~~~~~~~~~~~~~~l~~~~~~~~- 88 (174)
T cd01841 22 KGKTVNNLGIAGISSR----------QYLEHIEPQLI--QKNPSKVFLFLGTNDIGKEVSSNQFIKWYRDIIEQIREEF- 88 (174)
T ss_pred CCCeEEecccccccHH----------HHHHHHHHHHH--hcCCCEEEEEeccccCCCCCCHHHHHHHHHHHHHHHHHHC-
Confidence 4566788888887653 23344432232 2577999999999999876679999999999999999875
Q ss_pred CCCCCEEEEEeeCCC-------CcH---HHHHHHHhhc-cCCCeEEEeC-------CC-C--CCCCCCCCCChHHHHHHH
Q 031029 94 LPSLPIIQVALASGD-------KYK---EKVREAQLGI-NLQNVVCVDA-------KG-L--HLKEDHLHLTTEAQVKLG 152 (167)
Q Consensus 94 ~~~lP~~~~~l~~~~-------~~~---~~vr~aQ~~~-~~p~~~~i~~-------~g-l--~~~~d~~H~~~~g~~~lG 152 (167)
|+.++++.++.+.. ... ..+.++.+.+ .--++.++|. .+ . ....|++||+.+||+.++
T Consensus 89 -p~~~vi~~~~~p~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~id~~~~~~~~~~~~~~~~~~DglH~n~~Gy~~~a 167 (174)
T cd01841 89 -PNTKIYLLSVLPVLEEDEIKTRSNTRIQRLNDAIKELAPELGVTFIDLNDVLVDEFGNLKKEYTTDGLHFNPKGYQKLL 167 (174)
T ss_pred -CCCEEEEEeeCCcCcccccccCCHHHHHHHHHHHHHHHHHCCCEEEEcHHHHcCCCCCccccccCCCcccCHHHHHHHH
Confidence 56888888876542 111 2333333333 2234555552 11 1 134799999999998777
Q ss_pred HHHHH
Q 031029 153 HMLAE 157 (167)
Q Consensus 153 ~r~a~ 157 (167)
+.++.
T Consensus 168 ~~l~~ 172 (174)
T cd01841 168 EILEE 172 (174)
T ss_pred HHHHh
Confidence 77654
No 10
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.73 E-value=5.6e-07 Score=67.37 Aligned_cols=129 Identities=19% Similarity=0.288 Sum_probs=89.9
Q ss_pred EEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Q 031029 16 VGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLELP 95 (167)
Q Consensus 16 I~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~~ 95 (167)
+-+++.+++|...+. ++.+++..+ ....+-|+++=|-||.....+++.|.+.+.+||+.+|+.. +
T Consensus 22 ~~v~n~g~~G~~~~~----------~~~~l~~~~---~~~pd~vvl~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~--~ 86 (169)
T cd01828 22 VKVANRGISGDTTRG----------LLARLDEDV---ALQPKAIFIMIGINDLAQGTSDEDIVANYRTILEKLRKHF--P 86 (169)
T ss_pred CceEecCcccccHHH----------HHHHHHHHh---ccCCCEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHC--C
Confidence 346788888887642 233333333 2466999999999999876779999999999999999874 5
Q ss_pred CCCEEEEEeeCCC----CcHHH---HHHHHhhc-cCCCeEEEeC-------CC---CCCCCCCCCCChHHHHHHHHHHHH
Q 031029 96 SLPIIQVALASGD----KYKEK---VREAQLGI-NLQNVVCVDA-------KG---LHLKEDHLHLTTEAQVKLGHMLAE 157 (167)
Q Consensus 96 ~lP~~~~~l~~~~----~~~~~---vr~aQ~~~-~~p~~~~i~~-------~g---l~~~~d~~H~~~~g~~~lG~r~a~ 157 (167)
..+++++.+.+.. ...+. +.++.+.+ +.+++.++|. ++ .....|++||+.+||+.+++.++.
T Consensus 87 ~~~vi~~~~~p~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~id~~~~~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~i~~ 166 (169)
T cd01828 87 NIKIVVQSILPVGELKSIPNEQIEELNRQLAQLAQQEGVTFLDLWAVFTNADGDLKNEFTTDGLHLNAKGYAVWAAALQP 166 (169)
T ss_pred CCeEEEEecCCcCccCcCCHHHHHHHHHHHHHHHHHCCCEEEechhhhcCCCCCcchhhccCccccCHHHHHHHHHHHHH
Confidence 7889988776542 12223 33333332 4577777763 11 012579999999999999988887
Q ss_pred HH
Q 031029 158 AY 159 (167)
Q Consensus 158 a~ 159 (167)
.+
T Consensus 167 ~~ 168 (169)
T cd01828 167 YL 168 (169)
T ss_pred hh
Confidence 54
No 11
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.73 E-value=2.6e-07 Score=71.30 Aligned_cols=133 Identities=14% Similarity=0.205 Sum_probs=86.3
Q ss_pred EEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCC
Q 031029 18 LVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLELPSL 97 (167)
Q Consensus 18 lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~~~l 97 (167)
+++.+++|-+.. .++.++...+. ...++-|+++=|-||.....+.+.|.++++.||+.+|+. +. -
T Consensus 46 v~N~Gi~G~tt~----------~~~~rl~~~l~--~~~pd~Vii~~GtND~~~~~~~~~~~~~l~~li~~~~~~-~~--~ 110 (191)
T PRK10528 46 VVNASISGDTSQ----------QGLARLPALLK--QHQPRWVLVELGGNDGLRGFPPQQTEQTLRQIIQDVKAA-NA--Q 110 (191)
T ss_pred EEecCcCcccHH----------HHHHHHHHHHH--hcCCCEEEEEeccCcCccCCCHHHHHHHHHHHHHHHHHc-CC--C
Confidence 778888775542 34455554442 246789999999999976667999999999999999975 32 2
Q ss_pred CEEEEEe--eCC-C-CcHHHHHHHHhhc-cCCCeEEEeC-----CCCC--CCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q 031029 98 PIIQVAL--ASG-D-KYKEKVREAQLGI-NLQNVVCVDA-----KGLH--LKEDHLHLTTEAQVKLGHMLAEAYLKHFVG 165 (167)
Q Consensus 98 P~~~~~l--~~~-~-~~~~~vr~aQ~~~-~~p~~~~i~~-----~gl~--~~~d~~H~~~~g~~~lG~r~a~a~l~~~y~ 165 (167)
|++ +.+ ++. . .+.+.+.++.+++ +-.++.+++. ...+ +..|++||+.+||+.+++.+++.+.+.+-+
T Consensus 111 ~il-l~~~~P~~~~~~~~~~~~~~~~~~a~~~~v~~id~~~~~~~~~~~~~~~DGiHpn~~Gy~~~A~~i~~~l~~~~~~ 189 (191)
T PRK10528 111 PLL-MQIRLPANYGRRYNEAFSAIYPKLAKEFDIPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNH 189 (191)
T ss_pred EEE-EEeecCCcccHHHHHHHHHHHHHHHHHhCCCccHHHHHhhccCHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 343 332 221 1 1223344444333 2223433331 0111 236999999999999999999999887765
Q ss_pred C
Q 031029 166 S 166 (167)
Q Consensus 166 ~ 166 (167)
+
T Consensus 190 ~ 190 (191)
T PRK10528 190 D 190 (191)
T ss_pred c
Confidence 4
No 12
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.71 E-value=6.2e-07 Score=69.51 Aligned_cols=154 Identities=16% Similarity=0.154 Sum_probs=97.2
Q ss_pred HHHHhhcCC---CeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC--CCHHHHHH
Q 031029 5 NAVVARAEG---ERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD--HDAEAYQQ 79 (167)
Q Consensus 5 ~~l~~~~~~---~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~--~~~~~Y~~ 79 (167)
..|.+. ++ .++-+|+.+++|-... |..........+.++...+.. ...+.-|+.+=|-||.... .+.+.|.+
T Consensus 29 ~~L~~~-l~~~~~~~~viN~Gv~G~tt~-~~~~~~~~~~~l~~l~~~l~~-~~~pd~vii~lGtND~~~~~~~~~~~~~~ 105 (208)
T cd01839 29 GVLEKA-LGANGENVRVIEDGLPGRTTV-LDDPFFPGRNGLTYLPQALES-HSPLDLVIIMLGTNDLKSYFNLSAAEIAQ 105 (208)
T ss_pred HHHHHH-HccCCCCeEEEecCcCCccee-ccCccccCcchHHHHHHHHHh-CCCCCEEEEeccccccccccCCCHHHHHH
Confidence 445554 33 3488999999997764 321110001223344333421 2477889999999998642 36899999
Q ss_pred HHHHHHHHHHhhCC---CCCCCEEEEEeeCC--C---------C---cHHHHHHHHhhc-cCCCeEEEeCCCC--CCCCC
Q 031029 80 NMEAFISNVREDLE---LPSLPIIQVALASG--D---------K---YKEKVREAQLGI-NLQNVVCVDAKGL--HLKED 139 (167)
Q Consensus 80 ~l~~li~~~R~~~~---~~~lP~~~~~l~~~--~---------~---~~~~vr~aQ~~~-~~p~~~~i~~~gl--~~~~d 139 (167)
++++|++.+|+... .|+.+++++..++. . + ....+.++.+.+ +..++.++|..++ ....|
T Consensus 106 ~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~iD~~~~~~~~~~D 185 (208)
T cd01839 106 GLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSLAGKFAGAEEKSKGLADAYRALAEELGCHFFDAGSVGSTSPVD 185 (208)
T ss_pred HHHHHHHHHHhccccccCCCCCEEEEeCCccCccccchhhhhccHHHHHHHHHHHHHHHHHHhCCCEEcHHHHhccCCCC
Confidence 99999999998652 26788887766543 1 0 111233333332 3456777775322 12469
Q ss_pred CCCCChHHHHHHHHHHHHHHHH
Q 031029 140 HLHLTTEAQVKLGHMLAEAYLK 161 (167)
Q Consensus 140 ~~H~~~~g~~~lG~r~a~a~l~ 161 (167)
++||+.+||+.|++.++..+.+
T Consensus 186 GvH~~~~G~~~~a~~l~~~i~~ 207 (208)
T cd01839 186 GVHLDADQHAALGQALASVIRA 207 (208)
T ss_pred ccCcCHHHHHHHHHHHHHHHhh
Confidence 9999999999999888877643
No 13
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.69 E-value=8.9e-07 Score=67.05 Aligned_cols=128 Identities=14% Similarity=0.208 Sum_probs=81.4
Q ss_pred eEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCC
Q 031029 15 RVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLEL 94 (167)
Q Consensus 15 pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~ 94 (167)
++-+++.++||...++ ++++++..+. ....+-|+++=|-+|.....+.+.|.+.++.||+.+|+.
T Consensus 31 ~~~v~n~g~~G~~~~~----------~l~~l~~~~~--~~~~d~v~i~~G~ND~~~~~~~~~~~~~~~~li~~~~~~--- 95 (183)
T cd04501 31 GKEVINRGINGDTTSQ----------MLVRFYEDVI--ALKPAVVIIMGGTNDIIVNTSLEMIKDNIRSMVELAEAN--- 95 (183)
T ss_pred CCeEEecCcCCccHHH----------HHHHHHHHHH--hcCCCEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHC---
Confidence 3556899999987654 2334433232 235678888889999986667899999999999999873
Q ss_pred CCCCEEEEEeeCCCC--c-------HH---HHHHHHhhc-cCCCeEEEeC-------CC----CCCCCCCCCCChHHHHH
Q 031029 95 PSLPIIQVALASGDK--Y-------KE---KVREAQLGI-NLQNVVCVDA-------KG----LHLKEDHLHLTTEAQVK 150 (167)
Q Consensus 95 ~~lP~~~~~l~~~~~--~-------~~---~vr~aQ~~~-~~p~~~~i~~-------~g----l~~~~d~~H~~~~g~~~ 150 (167)
..++|++...+... + .+ .+.++.+++ +-.++.++|. .+ -.+..|++||+.+||+.
T Consensus 96 -~~~~il~~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~v~~vd~~~~~~~~~~~~~~~~~~~DgvHp~~~Gy~~ 174 (183)
T cd04501 96 -GIKVILASPLPVDDYPWKPQWLRPANKLKSLNRWLKDYARENGLLFLDFYSPLLDERNVGLKPGLLTDGLHPSREGYRV 174 (183)
T ss_pred -CCcEEEEeCCCcCccccchhhcchHHHHHHHHHHHHHHHHHcCCCEEechhhhhccccccccccccCCCCCCCHHHHHH
Confidence 34556555443311 1 12 222233332 2234555442 10 11247999999999999
Q ss_pred HHHHHHHH
Q 031029 151 LGHMLAEA 158 (167)
Q Consensus 151 lG~r~a~a 158 (167)
+++.++++
T Consensus 175 ~a~~i~~~ 182 (183)
T cd04501 175 MAPLAEKA 182 (183)
T ss_pred HHHHHHHh
Confidence 99988765
No 14
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.65 E-value=2.5e-06 Score=64.15 Aligned_cols=105 Identities=23% Similarity=0.250 Sum_probs=73.5
Q ss_pred CCeeeEEEEEecCCCCCCCC--CHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC-c-----HHHHHHHHhhccCC
Q 031029 53 GGRIKALLWYQGESDASTDH--DAEAYQQNMEAFISNVREDLELPSLPIIQVALASGDK-Y-----KEKVREAQLGINLQ 124 (167)
Q Consensus 53 ~~~i~gvlW~QGEsD~~~~~--~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~-~-----~~~vr~aQ~~~~~p 124 (167)
+.+++.|+.+=|.||..... +.+.|.+.++.||+.+|+.. |+.++++......+. . ...+++.-.....+
T Consensus 53 g~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~li~~i~~~~--p~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (169)
T cd01831 53 GIGPDLVVINLGTNDFSTGNNPPGEDFTNAYVEFIEELRKRY--PDAPIVLMLGPMLFGPYGTEEEIKRVAEAFKDQKSK 130 (169)
T ss_pred CCCCCEEEEECCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCCeEEEEecCccccccccHHHHHHHHHHHHhcCCc
Confidence 34488999999999986543 68999999999999999865 577887766443322 1 12233322221225
Q ss_pred CeEEEeCCCC---CCCCCCCCCChHHHHHHHHHHHHHH
Q 031029 125 NVVCVDAKGL---HLKEDHLHLTTEAQVKLGHMLAEAY 159 (167)
Q Consensus 125 ~~~~i~~~gl---~~~~d~~H~~~~g~~~lG~r~a~a~ 159 (167)
++.+++.... ....|++||+.+||..|++.++.++
T Consensus 131 ~v~~id~~~~~~~~~~~DgiHPn~~G~~~iA~~l~~~i 168 (169)
T cd01831 131 KVHYFDTPGILQHNDIGCDWHPTVAGHQKIAKHLLPAI 168 (169)
T ss_pred eEEEEecccccCCCCcCCCCCCCHHHHHHHHHHHHHHh
Confidence 7888886432 2246999999999999888887764
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.65 E-value=8.7e-07 Score=67.31 Aligned_cols=142 Identities=15% Similarity=0.204 Sum_probs=93.8
Q ss_pred chHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCC---eeeEEEEEecCCCCCCC-----CC
Q 031029 2 SFANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGG---RIKALLWYQGESDASTD-----HD 73 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~---~i~gvlW~QGEsD~~~~-----~~ 73 (167)
+++..|.+. +...+-+++.+.||.... .++.+++..+. .. .++-|+.+=|-||.... .+
T Consensus 20 ~~~~~l~~~-~~~~~~v~N~g~~G~t~~----------~~~~~~~~~~~--~~~~~~pd~vii~~G~ND~~~~~~~~~~~ 86 (199)
T cd01838 20 GFGAALADV-YSRKLDVINRGFSGYNTR----------WALKVLPKIFL--EEKLAQPDLVTIFFGANDAALPGQPQHVP 86 (199)
T ss_pred cHHHHHHHH-hcchhheeccCCCcccHH----------HHHHHHHHhcC--ccccCCceEEEEEecCccccCCCCCCccc
Confidence 466777777 333478899999996642 23344443332 23 79999999999999754 34
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC----------------cHH---HHHHHHhhc-cCCCeEEEeCC-
Q 031029 74 AEAYQQNMEAFISNVREDLELPSLPIIQVALASGDK----------------YKE---KVREAQLGI-NLQNVVCVDAK- 132 (167)
Q Consensus 74 ~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~----------------~~~---~vr~aQ~~~-~~p~~~~i~~~- 132 (167)
.+.|.++++.||+.+|+.. ++.+++++...+... ..+ .++++.+.+ ...++.++|..
T Consensus 87 ~~~~~~~~~~~i~~~~~~~--~~~~ii~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~iD~~~ 164 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLS--PKTKVILITPPPVDEEAWEKSLEDGGSQPGRTNELLKQYAEACVEVAEELGVPVIDLWT 164 (199)
T ss_pred HHHHHHHHHHHHHHHHhhC--CCCeEEEeCCCCCCHHHHhhhhccccCCccccHHHHHHHHHHHHHHHHHhCCcEEEHHH
Confidence 7999999999999999875 567888776654221 111 222333332 23456666621
Q ss_pred ---C-----CCCCCCCCCCChHHHHHHHHHHHHH
Q 031029 133 ---G-----LHLKEDHLHLTTEAQVKLGHMLAEA 158 (167)
Q Consensus 133 ---g-----l~~~~d~~H~~~~g~~~lG~r~a~a 158 (167)
+ -.+..|++||+.+||+.+++.++++
T Consensus 165 ~~~~~~~~~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 198 (199)
T cd01838 165 AMQEEAGWLESLLTDGLHFSSKGYELLFEEIVKV 198 (199)
T ss_pred HHHhccCchhhhcCCCCCcCHhHHHHHHHHHHhh
Confidence 1 1124799999999998888877654
No 16
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.62 E-value=2.5e-06 Score=66.69 Aligned_cols=107 Identities=22% Similarity=0.275 Sum_probs=77.5
Q ss_pred CeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC----cHHHHH---HHHhh-c-cCC
Q 031029 54 GRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLELPSLPIIQVALASGDK----YKEKVR---EAQLG-I-NLQ 124 (167)
Q Consensus 54 ~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~----~~~~vr---~aQ~~-~-~~p 124 (167)
..++.|+-+=|-||.....+.+.|.++|+.||+.+|+.. |+.+++++.+.+... ..+.+. ++.++ + ..+
T Consensus 88 ~~pd~VvI~~G~ND~~~~~~~~~~~~~l~~ii~~l~~~~--P~~~Iil~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~ 165 (214)
T cd01820 88 VNPKVVVLLIGTNNIGHTTTAEEIAEGILAIVEEIREKL--PNAKILLLGLLPRGQNPNPLRERNAQVNRLLAVRYDGLP 165 (214)
T ss_pred CCCCEEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHC--CCCeEEEEeccCCCCCchhHHHHHHHHHHHHHHHhcCCC
Confidence 467889999999999876679999999999999999876 578888888765431 212222 22222 2 345
Q ss_pred CeEEEeCCCC----------CCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 031029 125 NVVCVDAKGL----------HLKEDHLHLTTEAQVKLGHMLAEAYLKH 162 (167)
Q Consensus 125 ~~~~i~~~gl----------~~~~d~~H~~~~g~~~lG~r~a~a~l~~ 162 (167)
++.++|.... ....|++||+.+||+.+++.+++.+.+.
T Consensus 166 ~v~~vd~~~~~~~~~g~~~~~~~~DGlHpn~~Gy~~~a~~l~~~l~~~ 213 (214)
T cd01820 166 NVTFLDIDKGFVQSDGTISHHDMPDYLHLTAAGYRKWADALHPTLARL 213 (214)
T ss_pred CEEEEeCchhhcccCCCcCHhhcCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 7888874321 0125999999999999999998887654
No 17
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.59 E-value=1.7e-06 Score=65.48 Aligned_cols=134 Identities=16% Similarity=0.231 Sum_probs=86.2
Q ss_pred hHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHH
Q 031029 3 FANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNME 82 (167)
Q Consensus 3 Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~ 82 (167)
+...+.+. ++ +-+++.++||..+ |.. .+.+. +. ...++-|+++=|-||.... ..|.++++
T Consensus 22 ~~~~~~~~-~~--~~v~N~g~~G~~~--~~~-------~~~~~---~~--~~~pd~vii~~G~ND~~~~---~~~~~~~~ 81 (177)
T cd01844 22 WTAILARR-LG--LEVINLGFSGNAR--LEP-------EVAEL---LR--DVPADLYIIDCGPNIVGAE---AMVRERLG 81 (177)
T ss_pred HHHHHHHH-hC--CCeEEeeeccccc--chH-------HHHHH---HH--hcCCCEEEEEeccCCCccH---HHHHHHHH
Confidence 44445554 43 5578999999753 211 12222 21 2467899999999998642 38999999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEeeCCC------C---cHHHHHHHHh----hc---cCCCeEEEeCCCC-----CCCCCCC
Q 031029 83 AFISNVREDLELPSLPIIQVALASGD------K---YKEKVREAQL----GI---NLQNVVCVDAKGL-----HLKEDHL 141 (167)
Q Consensus 83 ~li~~~R~~~~~~~lP~~~~~l~~~~------~---~~~~vr~aQ~----~~---~~p~~~~i~~~gl-----~~~~d~~ 141 (167)
.+|+.+|+.. |+.|++++...+.. . ....++.+.. .+ ..+++.+++...+ ....|++
T Consensus 82 ~~i~~i~~~~--p~~~iil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~~~~~~~~~Dgl 159 (177)
T cd01844 82 PLVKGLRETH--PDTPILLVSPRYCPDAELTPGRGKLTLAVRRALREAFEKLRADGVPNLYYLDGEELLGPDGEALVDGI 159 (177)
T ss_pred HHHHHHHHHC--cCCCEEEEecCCCCccccCcchhHHHHHHHHHHHHHHHHHHhcCCCCEEEecchhhcCCCCCCCCCCC
Confidence 9999999976 57899888765431 1 0111221111 11 2467888874222 1235999
Q ss_pred CCChHHHHHHHHHHHHH
Q 031029 142 HLTTEAQVKLGHMLAEA 158 (167)
Q Consensus 142 H~~~~g~~~lG~r~a~a 158 (167)
||+.+||+.++++++..
T Consensus 160 Hpn~~Gy~~~a~~l~~~ 176 (177)
T cd01844 160 HPTDLGHMRYADRFEPV 176 (177)
T ss_pred CCCHHHHHHHHHHHhhc
Confidence 99999999998888764
No 18
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.58 E-value=2.1e-06 Score=62.56 Aligned_cols=134 Identities=17% Similarity=0.238 Sum_probs=93.8
Q ss_pred CCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC--CCHHHHHHHHHHHHHHHH
Q 031029 12 EGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD--HDAEAYQQNMEAFISNVR 89 (167)
Q Consensus 12 ~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~--~~~~~Y~~~l~~li~~~R 89 (167)
+...+-+++.+++|++...+..... ..... .....+-|+++.|.+|.... .+...|.+.+..+++.++
T Consensus 32 ~~~~~~~~n~~~~g~~~~~~~~~~~--------~~~~~--~~~~~d~vil~~G~ND~~~~~~~~~~~~~~~~~~~i~~~~ 101 (187)
T cd00229 32 GGPGVEVINLGVSGATTADALRRLG--------LRLAL--LKDKPDLVIIELGTNDLGRGGDTSIDEFKANLEELLDALR 101 (187)
T ss_pred cCCCceEEeecccchhHHHHHhhcc--------hhhhh--ccCCCCEEEEEecccccccccccCHHHHHHHHHHHHHHHH
Confidence 5678889999999999987665432 11112 24789999999999999754 357899999999999999
Q ss_pred hhCCCCCCCEEEEEeeCCCC-------cHHHHHHHHhhc--cCC---CeEEEeCCCC-------CCCCCCCCCChHHHHH
Q 031029 90 EDLELPSLPIIQVALASGDK-------YKEKVREAQLGI--NLQ---NVVCVDAKGL-------HLKEDHLHLTTEAQVK 150 (167)
Q Consensus 90 ~~~~~~~lP~~~~~l~~~~~-------~~~~vr~aQ~~~--~~p---~~~~i~~~gl-------~~~~d~~H~~~~g~~~ 150 (167)
+.. +..+++++...+... ......++.+.+ ..+ ++.+++.... ....|++||+.+|++.
T Consensus 102 ~~~--~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~Dg~H~~~~G~~~ 179 (187)
T cd00229 102 ERA--PGAKVILITPPPPPPREGLLGRALPRYNEAIKAVAAENPAPSGVDLVDLAALLGDEDKSLYSPDGIHPNPAGHKL 179 (187)
T ss_pred HHC--CCCcEEEEeCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCcceEEEEhhhhhCCCccccccCCCCCCchhhHHH
Confidence 843 578888888776531 122333333332 233 5777775321 2247999999999988
Q ss_pred HHHHHHH
Q 031029 151 LGHMLAE 157 (167)
Q Consensus 151 lG~r~a~ 157 (167)
+++.+++
T Consensus 180 ~a~~i~~ 186 (187)
T cd00229 180 IAEALAS 186 (187)
T ss_pred HHHHHhc
Confidence 8877654
No 19
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.57 E-value=9.3e-07 Score=68.00 Aligned_cols=143 Identities=15% Similarity=0.207 Sum_probs=90.4
Q ss_pred chHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC-----CCHHH
Q 031029 2 SFANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD-----HDAEA 76 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~-----~~~~~ 76 (167)
+++..|.+. +...+-++|.+++|.....+..... +...+.. + ....-|++.-|-||.... ...+.
T Consensus 22 ~w~~~l~~~-~~~~~~v~N~gi~G~ts~~~~~~~~-~~~~l~~----~----~~pdlVii~~G~ND~~~~~~~~~~~~~~ 91 (198)
T cd01821 22 GWGQALPQY-LDTGITVVNHAKGGRSSRSFRDEGR-WDAILKL----I----KPGDYVLIQFGHNDQKPKDPEYTEPYTT 91 (198)
T ss_pred ChHHHHHHH-hCCCCEEEeCCCCCccHHHHHhCCc-HHHHHhh----C----CCCCEEEEECCCCCCCCCCCCCCCcHHH
Confidence 356677777 4558899999999998776653221 1222211 1 146789999999999764 36799
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCC---------CcHHHHHHHHhhc-cCCCeEEEeC---------------
Q 031029 77 YQQNMEAFISNVREDLELPSLPIIQVALASGD---------KYKEKVREAQLGI-NLQNVVCVDA--------------- 131 (167)
Q Consensus 77 Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~---------~~~~~vr~aQ~~~-~~p~~~~i~~--------------- 131 (167)
|.+++.+||+.+|+. + .+++++...+.. .....+.++++.+ ..-++.++|.
T Consensus 92 ~~~nl~~ii~~~~~~-~---~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~vD~~~~~~~~~~~~g~~~ 167 (198)
T cd01821 92 YKEYLRRYIAEARAK-G---ATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLIDLNAASRALYEAIGPEK 167 (198)
T ss_pred HHHHHHHHHHHHHHC-C---CeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEEecHHHHHHHHHHhChHh
Confidence 999999999999974 2 334444333210 1112344444443 2334444441
Q ss_pred -CC--CCCCCCCCCCChHHHHHHHHHHHHH
Q 031029 132 -KG--LHLKEDHLHLTTEAQVKLGHMLAEA 158 (167)
Q Consensus 132 -~g--l~~~~d~~H~~~~g~~~lG~r~a~a 158 (167)
.. ..+..|++||+.+||+.|++.++.+
T Consensus 168 ~~~~~~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 168 SKKYFPEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred HHhhCcCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 01 0124799999999999998888764
No 20
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.53 E-value=7.1e-06 Score=62.02 Aligned_cols=138 Identities=22% Similarity=0.270 Sum_probs=92.5
Q ss_pred eEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC-CCHHHHHHHHHHHHHHHHhhCC
Q 031029 15 RVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD-HDAEAYQQNMEAFISNVREDLE 93 (167)
Q Consensus 15 pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~-~~~~~Y~~~l~~li~~~R~~~~ 93 (167)
.+-+++.+.+|.+...+..-. ...+... +. ...++-|++.=|-||.... ...+.|.++++.||+.+|+..
T Consensus 24 ~~~v~N~g~~G~t~~~~~~~~---~~~~~~~---l~--~~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~li~~i~~~~- 94 (189)
T cd01825 24 GVIYDNLGVNGASASLLLKWD---AEFLQAQ---LA--ALPPDLVILSYGTNEAFNKQLNASEYRQQLREFIKRLRQIL- 94 (189)
T ss_pred ceEEecCccCchhhhhhhccC---HHHHHHH---Hh--hCCCCEEEEECCCcccccCCCCHHHHHHHHHHHHHHHHHHC-
Confidence 678899999998765433211 1112211 21 2466889999999998654 258999999999999999875
Q ss_pred CCCCCEEEEEeeCC----C-------CcHHHHHHHHhhc-cCCCeEEEeCC----C---------CC-CCCCCCCCChHH
Q 031029 94 LPSLPIIQVALASG----D-------KYKEKVREAQLGI-NLQNVVCVDAK----G---------LH-LKEDHLHLTTEA 147 (167)
Q Consensus 94 ~~~lP~~~~~l~~~----~-------~~~~~vr~aQ~~~-~~p~~~~i~~~----g---------l~-~~~d~~H~~~~g 147 (167)
+..+++++...+. . .....+.++++++ .-.++.++|.. + .. ...|++||+.+|
T Consensus 95 -~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~vd~~~~~~~~~~~~~~~~~~~~~~Dg~Hp~~~G 173 (189)
T cd01825 95 -PNASILLVGPPDSLQKTGAGRWRTPPGLDAVIAAQRRVAKEEGIAFWDLYAAMGGEGGIWQWAEPGLARKDYVHLTPRG 173 (189)
T ss_pred -CCCeEEEEcCCchhccCCCCCcccCCcHHHHHHHHHHHHHHcCCeEEeHHHHhCCcchhhHhhcccccCCCcccCCcch
Confidence 5678887776432 0 0123455555553 33446666521 0 01 146999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 031029 148 QVKLGHMLAEAYLKH 162 (167)
Q Consensus 148 ~~~lG~r~a~a~l~~ 162 (167)
|+.|++.+++++.++
T Consensus 174 ~~~~a~~i~~~i~~~ 188 (189)
T cd01825 174 YERLANLLYEALLKA 188 (189)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998875
No 21
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.45 E-value=1.1e-05 Score=62.40 Aligned_cols=144 Identities=17% Similarity=0.260 Sum_probs=89.6
Q ss_pred HHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCC--------CHH
Q 031029 4 ANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDH--------DAE 75 (167)
Q Consensus 4 a~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~--------~~~ 75 (167)
+..|.++++..++=+|+.++||........+..+..++-..+ +. ...++.|+.+=|-||..... +.+
T Consensus 28 ~~~l~~~~~~~~~~v~N~Gi~G~t~~~~~~~~~~l~r~~~~v---~~--~~~p~~vii~~G~ND~~~~~~~~~~~~~~~~ 102 (204)
T cd01830 28 AARLAARAGTRGIAVLNAGIGGNRLLADGLGPSALARFDRDV---LS--QPGVRTVIILEGVNDIGASGTDFAAAPVTAE 102 (204)
T ss_pred HHHHHhccCCCCcEEEECCccCcccccCCCChHHHHHHHHHH---hc--CCCCCEEEEecccccccccccccccCCCCHH
Confidence 345555557889999999999998765444333333332222 22 13578899999999986543 678
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC--c----HHHHHHHHhh-c-cCCC-eEEEeC-------C---CC-C
Q 031029 76 AYQQNMEAFISNVREDLELPSLPIIQVALASGDK--Y----KEKVREAQLG-I-NLQN-VVCVDA-------K---GL-H 135 (167)
Q Consensus 76 ~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~--~----~~~vr~aQ~~-~-~~p~-~~~i~~-------~---gl-~ 135 (167)
.|.++++.|++.+|+. ..++++..+.+... + .+.++....+ + +... ..++|. . .+ +
T Consensus 103 ~~~~~l~~ii~~~~~~----~~~vil~t~~P~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~vD~~~~~~~~~~~~~~~~ 178 (204)
T cd01830 103 ELIAGYRQLIRRAHAR----GIKVIGATITPFEGSGYYTPAREATRQAVNEWIRTSGAFDAVVDFDAALRDPADPSRLRP 178 (204)
T ss_pred HHHHHHHHHHHHHHHC----CCeEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHccCCCCeeeEhHHhhcCCCCchhccc
Confidence 9999999999999975 35677766666531 1 2233332222 2 2211 123441 1 11 1
Q ss_pred -C-CCCCCCCChHHHHHHHHHHH
Q 031029 136 -L-KEDHLHLTTEAQVKLGHMLA 156 (167)
Q Consensus 136 -~-~~d~~H~~~~g~~~lG~r~a 156 (167)
+ ..|++||+.+||+.|++.++
T Consensus 179 ~~~~~DGvHpn~~Gy~~~A~~i~ 201 (204)
T cd01830 179 AYDSGDHLHPNDAGYQAMADAVD 201 (204)
T ss_pred ccCCCCCCCCCHHHHHHHHHhcC
Confidence 1 25999999999977776543
No 22
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.24 E-value=6.6e-05 Score=57.26 Aligned_cols=141 Identities=16% Similarity=0.181 Sum_probs=86.0
Q ss_pred hHHHHHhhc--CCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC------CCH
Q 031029 3 FANAVVARA--EGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD------HDA 74 (167)
Q Consensus 3 Fa~~l~~~~--~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~------~~~ 74 (167)
|+..+.+.. .+.+|-+++.+++|...... ..++...+..... ...++-|+.+=|-||.... ...
T Consensus 23 ~~~~~~~~~~~~~~~~~~~N~gi~G~t~~~~------~~r~~~~~~~~~~--~~~pd~V~i~~G~ND~~~~~~~~~~~~~ 94 (193)
T cd01835 23 WVGRLRARWMNLGDDPVLYNLGVRGDGSEDV------AARWRAEWSRRGE--LNVPNRLVLSVGLNDTARGGRKRPQLSA 94 (193)
T ss_pred hHHHHHHHhhccCCCeeEEeecCCCCCHHHH------HHHHHHHHHhhcc--cCCCCEEEEEecCcccccccCcccccCH
Confidence 444444432 36788899999999986532 1121122211111 1467899999999999654 456
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC--c---HHHHH---HHHhhc-cCCCeEEEeCCC-C--------CC
Q 031029 75 EAYQQNMEAFISNVREDLELPSLPIIQVALASGDK--Y---KEKVR---EAQLGI-NLQNVVCVDAKG-L--------HL 136 (167)
Q Consensus 75 ~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~--~---~~~vr---~aQ~~~-~~p~~~~i~~~g-l--------~~ 136 (167)
+.|+..++.|+...|+ ..|++++.+.+... . .+.++ ++.+++ ...++.++|... + .+
T Consensus 95 ~~~~~~~~~ii~~~~~-----~~~vi~~~~~p~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~vd~~~~~~~~~~~~~~~ 169 (193)
T cd01835 95 RAFLFGLNQLLEEAKR-----LVPVLVVGPTPVDEAKMPYSNRRIARLETAFAEVCLRRDVPFLDTFTPLLNHPQWRREL 169 (193)
T ss_pred HHHHHHHHHHHHHHhc-----CCcEEEEeCCCccccccchhhHHHHHHHHHHHHHHHHcCCCeEeCccchhcCcHHHHhh
Confidence 8899999999988864 46777777655421 1 22233 333332 234566665310 0 01
Q ss_pred -CCCCCCCChHHHHHHHHHHH
Q 031029 137 -KEDHLHLTTEAQVKLGHMLA 156 (167)
Q Consensus 137 -~~d~~H~~~~g~~~lG~r~a 156 (167)
..|++||+.+||+.|++++.
T Consensus 170 ~~~Dg~Hpn~~G~~~~a~~~~ 190 (193)
T cd01835 170 AATDGIHPNAAGYGWLAWLVL 190 (193)
T ss_pred hccCCCCCCHHHHHHHHHHHh
Confidence 24999999999988888765
No 23
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.21 E-value=3.4e-05 Score=57.12 Aligned_cols=129 Identities=15% Similarity=0.159 Sum_probs=81.6
Q ss_pred hHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHH
Q 031029 3 FANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNME 82 (167)
Q Consensus 3 Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~ 82 (167)
.+..+.+.+|+. .|++..|++. ...+..++..+. .+...+.|+-+=|-||.. |.++|+
T Consensus 13 ~~~~~~~~~p~~---~i~a~~g~~~-----------~~~~~~l~~~~~-~~~~~d~vvi~lGtNd~~-------~~~nl~ 70 (150)
T cd01840 13 SSPALQEIFPNI---QIDAKVGRQM-----------SEAPDLIRQLKD-SGKLRKTVVIGLGTNGPF-------TKDQLD 70 (150)
T ss_pred hHHHHHHHCCCC---EEEeeecccH-----------HHHHHHHHHHHH-cCCCCCeEEEEecCCCCC-------CHHHHH
Confidence 356677777775 4565555542 122333332222 234568888899999973 688999
Q ss_pred HHHHHHHhhCCCCCCCEEEEEeeCCCCcHHHHHHHHhhc--cCCCeEEEeCC----CCC--CCCCCCCCChHHHHHHHHH
Q 031029 83 AFISNVREDLELPSLPIIQVALASGDKYKEKVREAQLGI--NLQNVVCVDAK----GLH--LKEDHLHLTTEAQVKLGHM 154 (167)
Q Consensus 83 ~li~~~R~~~~~~~lP~~~~~l~~~~~~~~~vr~aQ~~~--~~p~~~~i~~~----gl~--~~~d~~H~~~~g~~~lG~r 154 (167)
+||+.+. ++.+++++.+.....+.+.+.+.-+++ +.|++.+++.. +-+ +..|++||+.+||+.+++.
T Consensus 71 ~ii~~~~-----~~~~ivlv~~~~~~~~~~~~n~~~~~~a~~~~~v~~id~~~~~~~~~~~~~~DgiHpn~~G~~~~a~~ 145 (150)
T cd01840 71 ELLDALG-----PDRQVYLVNPHVPRPWEPDVNAYLLDAAKKYKNVTIIDWYKAAKGHPDWFYGDGVHPNPAGAKLYAAL 145 (150)
T ss_pred HHHHHcC-----CCCEEEEEECCCCcchHHHHHHHHHHHHHHCCCcEEecHHHHhcccchhhcCCCCCCChhhHHHHHHH
Confidence 9988773 356777776653223544555444443 46788887731 111 1469999999999998888
Q ss_pred HHHH
Q 031029 155 LAEA 158 (167)
Q Consensus 155 ~a~a 158 (167)
++++
T Consensus 146 i~~a 149 (150)
T cd01840 146 IAKA 149 (150)
T ss_pred HHHh
Confidence 8775
No 24
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.11 E-value=9.4e-05 Score=56.56 Aligned_cols=136 Identities=16% Similarity=0.209 Sum_probs=84.3
Q ss_pred CeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCC------------HHHHHHHH
Q 031029 14 ERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHD------------AEAYQQNM 81 (167)
Q Consensus 14 ~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~------------~~~Y~~~l 81 (167)
..+-+++.++||+.+..=.. .. ...++...+. ...++.|+.+=|-||...... .+.|.+++
T Consensus 25 ~~~~v~~~~~~g~~~~~~~~-~~----~~~~~~~~l~--~~~pd~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (200)
T cd01829 25 PGIRVINRSKGSSGLVRPDF-FD----WPEKLKELIA--EEKPDVVVVFLGANDRQDIRDGDGYLKFGSPEWEEEYRQRI 97 (200)
T ss_pred CCcEEEECccccccccCCCc-CC----HHHHHHHHHh--cCCCCEEEEEecCCCCccccCCCceeecCChhHHHHHHHHH
Confidence 35778999999887632111 11 1112222232 257789999989999753211 37899999
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEeeCCCC-----cHHHHHHHHhhc-cCCCeEEEeC-------CCC-------------C
Q 031029 82 EAFISNVREDLELPSLPIIQVALASGDK-----YKEKVREAQLGI-NLQNVVCVDA-------KGL-------------H 135 (167)
Q Consensus 82 ~~li~~~R~~~~~~~lP~~~~~l~~~~~-----~~~~vr~aQ~~~-~~p~~~~i~~-------~gl-------------~ 135 (167)
+.+++.+|+ +..+++++..++... ....+.++++.+ .-.++.++|. .+. .
T Consensus 98 ~~lv~~~~~----~~~~vili~~pp~~~~~~~~~~~~~~~~~~~~a~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (200)
T cd01829 98 DELLNVARA----KGVPVIWVGLPAMRSPKLSADMVYLNSLYREEVAKAGGEFVDVWDGFVDENGRFTYSGTDVNGKKVR 173 (200)
T ss_pred HHHHHHHHh----CCCcEEEEcCCCCCChhHhHHHHHHHHHHHHHHHHcCCEEEEhhHhhcCCCCCeeeeccCCCCcEEE
Confidence 999999984 357788887765421 112333444332 3345666652 111 0
Q ss_pred -CCCCCCCCChHHHHHHHHHHHHHHH
Q 031029 136 -LKEDHLHLTTEAQVKLGHMLAEAYL 160 (167)
Q Consensus 136 -~~~d~~H~~~~g~~~lG~r~a~a~l 160 (167)
...|++||+.+||+.+++.+...+.
T Consensus 174 ~~~~DgvH~~~~G~~~~a~~i~~~l~ 199 (200)
T cd01829 174 LRTNDGIHFTAAGGRKLAFYVEKLIR 199 (200)
T ss_pred eecCCCceECHHHHHHHHHHHHHHhh
Confidence 1359999999999888888877653
No 25
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=97.97 E-value=9.8e-05 Score=56.79 Aligned_cols=134 Identities=19% Similarity=0.205 Sum_probs=83.6
Q ss_pred CCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhh-ccCCeeeEEEEEecCCCCCCC--------------CCHHH
Q 031029 12 EGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVN-KSGGRIKALLWYQGESDASTD--------------HDAEA 76 (167)
Q Consensus 12 ~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~-~~~~~i~gvlW~QGEsD~~~~--------------~~~~~ 76 (167)
...++-+++.|.+|....++.. +++.-.. ......+.|++.=|-||.... .+.+.
T Consensus 34 ~~~~~~~~N~g~~G~t~~~~~~----------r~~~~~~~~~~~~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~ 103 (204)
T cd04506 34 TVKKVTVQNFGVSGDRSDQLLK----------RLKTKKVQKELKKADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEET 103 (204)
T ss_pred cCCceEEEeecccchhHHHHHH----------HHhcchhhhhcccCCEEEEEecchhHHHHHHhccccchHHHHHHHHHH
Confidence 4668899999999998865442 2111000 001356778888899997421 02467
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCEEEEEee-CC-C--C----cHHHHHHHH---hhc--cCCCeEEEeCCC----C----C
Q 031029 77 YQQNMEAFISNVREDLELPSLPIIQVALA-SG-D--K----YKEKVREAQ---LGI--NLQNVVCVDAKG----L----H 135 (167)
Q Consensus 77 Y~~~l~~li~~~R~~~~~~~lP~~~~~l~-~~-~--~----~~~~vr~aQ---~~~--~~p~~~~i~~~g----l----~ 135 (167)
|+.+|.+||+.+|+.. |+.+++++.+. +. . . ....+++.. +++ ...++.+++... - -
T Consensus 104 ~~~~l~~~i~~ir~~~--p~~~Ivv~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~v~~vd~~~~~~~~~~~~~ 181 (204)
T cd04506 104 YQNNLKKIFKEIRKLN--PDAPIFLVGLYNPFYVYFPNITEINDIVNDWNEASQKLASQYKNAYFVPIFDLFSDGQNKYL 181 (204)
T ss_pred HHHHHHHHHHHHHHHC--CCCeEEEEecCCccccccchHHHHHHHHHHHHHHHHHHHHhCCCeEEEehHHhhcCCccccc
Confidence 9999999999999864 57888877752 22 1 1 111222211 222 245688877411 0 1
Q ss_pred CCCCCCCCChHHHHHHHHHHHH
Q 031029 136 LKEDHLHLTTEAQVKLGHMLAE 157 (167)
Q Consensus 136 ~~~d~~H~~~~g~~~lG~r~a~ 157 (167)
+..|++||+.+||+.+++.++.
T Consensus 182 ~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 182 LTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred ccccCcCCCHHHHHHHHHHHHh
Confidence 1359999999999888888765
No 26
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=97.88 E-value=3.4e-05 Score=59.35 Aligned_cols=85 Identities=20% Similarity=0.323 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCC--------C-cHHHHHHHHhhc-------cCCCeEEEeCCC---
Q 031029 73 DAEAYQQNMEAFISNVREDLELPSLPIIQVALASGD--------K-YKEKVREAQLGI-------NLQNVVCVDAKG--- 133 (167)
Q Consensus 73 ~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~--------~-~~~~vr~aQ~~~-------~~p~~~~i~~~g--- 133 (167)
+++.+.+.+..+++.+|+.- |+.|+++++...+. + .....|++++++ ..+|+++++...
T Consensus 72 ~~~~~~~~~~~fv~~iR~~h--P~tPIllv~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~~l~~~g~~nl~~l~g~~llg 149 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAH--PDTPILLVSPIPYPAGYFDNSRGETVEEFREALREAVEQLRKEGDKNLYYLDGEELLG 149 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT---SSS-EEEEE----TTTTS--TTS--HHHHHHHHHHHHHHHHHTT-TTEEEE-HHHCS-
T ss_pred CHHHHHHHHHHHHHHHHHhC--CCCCEEEEecCCccccccCchHHHHHHHHHHHHHHHHHHHHHcCCCcEEEeCchhhcC
Confidence 57899999999999999875 79999999954331 1 234566666542 378999988422
Q ss_pred --CCCCCCCCCCChHHHHHHHHHHHHHH
Q 031029 134 --LHLKEDHLHLTTEAQVKLGHMLAEAY 159 (167)
Q Consensus 134 --l~~~~d~~H~~~~g~~~lG~r~a~a~ 159 (167)
-....|++||++.|+..+|+++++.+
T Consensus 150 ~d~e~tvDgvHP~DlG~~~~a~~l~~~i 177 (178)
T PF14606_consen 150 DDHEATVDGVHPNDLGMMRMADALEPVI 177 (178)
T ss_dssp ----------------------------
T ss_pred cccccccccccccccccccccccccccC
Confidence 12257999999999988888877643
No 27
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=97.86 E-value=0.00015 Score=53.16 Aligned_cols=135 Identities=16% Similarity=0.241 Sum_probs=84.6
Q ss_pred chHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC----CCHHHH
Q 031029 2 SFANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD----HDAEAY 77 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~----~~~~~Y 77 (167)
+|...|.++ ++..+-+++.+.+|+...++. ..+-..+.. .. ...++.|+.+=|-+|.... .+.+.|
T Consensus 18 ~~~~~l~~~-~~~~~~~~n~~~~G~~~~~~~------~~~~~~~~~-~~--~~~~d~vvi~~G~ND~~~~~~~~~~~~~~ 87 (179)
T PF13472_consen 18 SYPDRLAER-PGRGIEVYNLGVSGATSSDFL------ARLQRDVLR-FK--DPKPDLVVISFGTNDVLNGDENDTSPEQY 87 (179)
T ss_dssp SHHHHHHHH-HTCCEEEEEEE-TT-BHHHHH------HHHHHHCHH-HC--GTTCSEEEEE--HHHHCTCTTCHHHHHHH
T ss_pred CHHHHHHHh-hCCCcEEEEEeecCccHhHHH------HHHHHHHhh-hc--cCCCCEEEEEcccccccccccccccHHHH
Confidence 466677776 678889999999999987631 111111111 11 3677899999999999875 457889
Q ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC---c---------HHHHHHHHhhc-cCCCeEEEeC----CCC------
Q 031029 78 QQNMEAFISNVREDLELPSLPIIQVALASGDK---Y---------KEKVREAQLGI-NLQNVVCVDA----KGL------ 134 (167)
Q Consensus 78 ~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~---~---------~~~vr~aQ~~~-~~p~~~~i~~----~gl------ 134 (167)
...++.+|+.+|... +++++.+.+... . ...+.++.+.+ ...++.++|. .+.
T Consensus 88 ~~~l~~~i~~~~~~~-----~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~id~~~~~~~~~~~~~~ 162 (179)
T PF13472_consen 88 EQNLRRIIEQLRPHG-----PVILVSPPPRGPDPRDPKQDYLNRRIDRYNQAIRELAKKYGVPFIDLFDAFDDHDGWFPK 162 (179)
T ss_dssp HHHHHHHHHHHHTTS-----EEEEEE-SCSSSSTTTTHTTCHHHHHHHHHHHHHHHHHHCTEEEEEHHHHHBTTTSCBHT
T ss_pred HHHHHHHHHhhcccC-----cEEEecCCCcccccccccchhhhhhHHHHHHHHHHHHHHcCCEEEECHHHHccccccchh
Confidence 999999999998642 888888765421 1 12333333333 3347777772 110
Q ss_pred CCCCCCCCCChHHHHHH
Q 031029 135 HLKEDHLHLTTEAQVKL 151 (167)
Q Consensus 135 ~~~~d~~H~~~~g~~~l 151 (167)
....|++||+.+|++.+
T Consensus 163 ~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 163 YYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp CTBTTSSSBBHHHHHHH
T ss_pred hcCCCCCCcCHHHhCcC
Confidence 12479999999998654
No 28
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0075 Score=46.63 Aligned_cols=110 Identities=21% Similarity=0.258 Sum_probs=68.9
Q ss_pred eeEEEEEecCCCCC--CCCCH--HHHHHHHHHHHHHHHhhCCCC---CCCEEEEEeeCC------CC-cHHHHHHHHhh-
Q 031029 56 IKALLWYQGESDAS--TDHDA--EAYQQNMEAFISNVREDLELP---SLPIIQVALASG------DK-YKEKVREAQLG- 120 (167)
Q Consensus 56 i~gvlW~QGEsD~~--~~~~~--~~Y~~~l~~li~~~R~~~~~~---~lP~~~~~l~~~------~~-~~~~vr~aQ~~- 120 (167)
.+-|+-+=|.||.. ....+ +.+..+++.||..+|+.-..+ -.|.+++.+.+. .. ....++.++..
T Consensus 78 ~d~v~i~lG~ND~~~~~~~~p~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 157 (216)
T COG2755 78 PDLVIIMLGGNDIGPLRGFSPNAAEFTKNLRQLIQALRKANPLAGLTPIPVLLVGIAPPFIATDFPTYGADWFHAANEIL 157 (216)
T ss_pred CCEEEEEeeccccchhcccCccHHHHHHHHHHHHHHHHHhcccccccccceeEEEecCCccccchhHHHHHHHHHHHHHH
Confidence 88999999999983 22345 999999999999999875421 166654554432 11 11223322222
Q ss_pred --c-c---CCCe----EEEeCCCCCC--CCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q 031029 121 --I-N---LQNV----VCVDAKGLHL--KEDHLHLTTEAQVKLGHMLAEAYLKHFVG 165 (167)
Q Consensus 121 --~-~---~p~~----~~i~~~gl~~--~~d~~H~~~~g~~~lG~r~a~a~l~~~y~ 165 (167)
+ . +|-. ..++....+. ..|++||+.+||..+++.++....+..+.
T Consensus 158 ~~la~~~~v~~~d~~~~~~~~~~~~~~~~~Dg~H~n~~Gy~~~a~~l~~~l~~~~~~ 214 (216)
T COG2755 158 AQLANELFVPLADLFDAGVDGGRLPELLTEDGLHPNAKGYQALAEALAEVLAKLLKL 214 (216)
T ss_pred HHhhhhcCccchHHHhcccccccCcccccCCCCCcCHhhHHHHHHHHHHHHHHHhcc
Confidence 2 1 1211 1221011111 36999999999999999999988877654
No 29
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=97.43 E-value=0.0024 Score=50.86 Aligned_cols=96 Identities=13% Similarity=0.191 Sum_probs=62.4
Q ss_pred chHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCC----------
Q 031029 2 SFANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTD---------- 71 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~---------- 71 (167)
+|+..+.+.....++-+++.|++|..+.+.......+ +.....++ ...++.|+-.=|=||....
T Consensus 33 ~y~~~la~~l~~~~~~~~n~a~sGa~~~~~~~~~~~~---~~~~~~~l---~~~~dlV~i~iG~ND~~~~~~~~~~~~~~ 106 (259)
T cd01823 33 SYPTLLARALGDETLSFTDVACSGATTTDGIEPQQGG---IAPQAGAL---DPDTDLVTITIGGNDLGFADVVKACILTG 106 (259)
T ss_pred cHHHHHHHHcCCCCceeeeeeecCcccccccccccCC---Cchhhccc---CCCCCEEEEEECccccchHHHHHHHhhcc
Confidence 4677787772222688999999999998765432100 00111112 2346677777777776321
Q ss_pred -----------------CCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEee
Q 031029 72 -----------------HDAEAYQQNMEAFISNVREDLELPSLPIIQVALA 105 (167)
Q Consensus 72 -----------------~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~ 105 (167)
...+.|.++++.+++.+|+.. |+.+++++...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~--p~a~I~~~gyp 155 (259)
T cd01823 107 GGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERA--PNARVVVVGYP 155 (259)
T ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEeccc
Confidence 235689999999999999854 67888888754
No 30
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=95.71 E-value=0.14 Score=42.65 Aligned_cols=47 Identities=17% Similarity=0.270 Sum_probs=34.1
Q ss_pred EEEEEecCCCCCC-------CCCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeC
Q 031029 58 ALLWYQGESDAST-------DHDAEAYQQNMEAFISNVREDLELPSLPIIQVALAS 106 (167)
Q Consensus 58 gvlW~QGEsD~~~-------~~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~ 106 (167)
.++++-| +|+.. ..+.+.|+++|.++++.+|+.+. +...++++.+..
T Consensus 126 VtI~lGg-ND~C~g~~d~~~~tp~eefr~NL~~~L~~Lr~~lP-~~s~ViLvgmpd 179 (305)
T cd01826 126 VIYSMIG-NDVCNGPNDTINHTTPEEFYENVMEALKYLDTKLP-NGSHVILVGLVD 179 (305)
T ss_pred EEEEecc-chhhcCCCccccCcCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeccc
Confidence 3445555 88754 35689999999999999999884 345666665544
No 31
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=95.08 E-value=0.3 Score=40.27 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=37.6
Q ss_pred eeeEEEEEecCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEe
Q 031029 55 RIKALLWYQGESDASTD------HDAEAYQQNMEAFISNVREDLELPSLPIIQVAL 104 (167)
Q Consensus 55 ~i~gvlW~QGEsD~~~~------~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l 104 (167)
..+-|.-+=|=+|.... ...+.|+++|+++++.+|+.. |+..++++.+
T Consensus 119 dwklVtI~IG~ND~c~~~~~~~~~~~~~~~~nL~~~L~~Lr~~~--P~~~V~lv~~ 172 (288)
T cd01824 119 DWKLITIFIGGNDLCSLCEDANPGSPQTFVKNLRKALDILRDEV--PRAFVNLVGL 172 (288)
T ss_pred CCcEEEEEecchhHhhhcccccCcCHHHHHHHHHHHHHHHHHhC--CCcEEEEEcC
Confidence 46667778888888531 247999999999999999876 5677777766
No 32
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.11 E-value=0.12 Score=39.83 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCC-C----C-c-----------HHHHHHHHhh---c-cCCCeEEEe-
Q 031029 73 DAEAYQQNMEAFISNVREDLELPSLPIIQVALASG-D----K-Y-----------KEKVREAQLG---I-NLQNVVCVD- 130 (167)
Q Consensus 73 ~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~-~----~-~-----------~~~vr~aQ~~---~-~~p~~~~i~- 130 (167)
+.++|+++|.+|+..+|+-+.. ..-+|.....|- + + . ...+-+|... + ......+.|
T Consensus 70 ~~~~Y~~NL~~Lf~rLk~~lp~-~allIW~tt~Pv~~~~~ggfl~~~~~~~~~~lr~dv~eaN~~A~~va~~~~~dVlDL 148 (183)
T cd01842 70 SMKTYRENLERLFSKLDSVLPI-ECLIVWNTAMPVAEEIKGGFLLPELHDLSKSLRYDVLEGNFYSATLAKCYGFDVLDL 148 (183)
T ss_pred CHHHHHHHHHHHHHHHHhhCCC-ccEEEEecCCCCCcCCcCceeccccccccccchhHHHHHHHHHHHHHHHcCceeeeh
Confidence 5799999999999999988763 444554444331 1 1 1 1123333322 1 122333333
Q ss_pred ------CCCCCCCCCCCCCChHHHHHHHHHHHH
Q 031029 131 ------AKGLHLKEDHLHLTTEAQVKLGHMLAE 157 (167)
Q Consensus 131 ------~~gl~~~~d~~H~~~~g~~~lG~r~a~ 157 (167)
+.... -.|++||+..|++.|++-+..
T Consensus 149 h~~fr~~~~~~-~~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 149 HYHFRHAMQHR-VRDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred HHHHHhHHhhc-CCCCcCcCHHHHHHHHHHHHH
Confidence 11111 369999999999887776543
No 33
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.73 E-value=0.92 Score=38.18 Aligned_cols=104 Identities=16% Similarity=0.249 Sum_probs=65.7
Q ss_pred CeeeEEEEEecCCCCCCC------------CCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCC--CcHH---HHHH
Q 031029 54 GRIKALLWYQGESDASTD------------HDAEAYQQNMEAFISNVREDLELPSLPIIQVALASGD--KYKE---KVRE 116 (167)
Q Consensus 54 ~~i~gvlW~QGEsD~~~~------------~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~--~~~~---~vr~ 116 (167)
..+++|+-+=|-||..+. .+.+.|..+..++++-.++ ...||+.+++++.. .... .+..
T Consensus 176 ~~~a~vVV~lGaND~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~~----~~~~V~WvGmP~~r~~~l~~dm~~ln~ 251 (354)
T COG2845 176 PKPAAVVVMLGANDRQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAHT----HKVPVLWVGMPPFRKKKLNADMVYLNK 251 (354)
T ss_pred CCccEEEEEecCCCHHhcccCCeeeecCchHHHHHHHHHHHHHHHHhcc----cCCcEEEeeCCCccccccchHHHHHHH
Confidence 489999999999997432 3568899999998888765 47999999999863 1111 1122
Q ss_pred HHhh----c-----cC-------CCeEEEeC-C---CCCC---CCCCCCCChHHHHHHHHHHHHHHHH
Q 031029 117 AQLG----I-----NL-------QNVVCVDA-K---GLHL---KEDHLHLTTEAQVKLGHMLAEAYLK 161 (167)
Q Consensus 117 aQ~~----~-----~~-------p~~~~i~~-~---gl~~---~~d~~H~~~~g~~~lG~r~a~a~l~ 161 (167)
.+.. + .+ ++..++.+ . |-+. ..|+|||+.+|.+.|...+=+-+..
T Consensus 252 iy~~~vE~~~gk~i~i~d~~v~e~G~~f~~~~~D~NGq~vrlR~~DGIh~T~~Gkrkla~~~~k~I~~ 319 (354)
T COG2845 252 IYSKAVEKLGGKFIDIWDGFVDEGGKDFVTTGVDINGQPVRLRAKDGIHFTKEGKRKLAFYLEKPIRA 319 (354)
T ss_pred HHHHHHHHhCCeEEEecccccccCCceeEEeccccCCceEEEeccCCceechhhHHHHHHHHHHHHHh
Confidence 2221 1 11 12212221 2 2221 3699999999998887766554443
No 34
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=87.74 E-value=3.7 Score=32.82 Aligned_cols=105 Identities=18% Similarity=0.239 Sum_probs=63.8
Q ss_pred eeeEEEEEecCCCCCCCC--------CHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCC-----------------
Q 031029 55 RIKALLWYQGESDASTDH--------DAEAYQQNMEAFISNVREDLELPSLPIIQVALASGDK----------------- 109 (167)
Q Consensus 55 ~i~gvlW~QGEsD~~~~~--------~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~----------------- 109 (167)
.+..++-|=|-||+...+ +-+.|.+++++|+..+..-. |..-+|++.-++.+.
T Consensus 68 ~p~lvtVffGaNDs~l~~~~~~~~hvPl~Ey~dNlr~iv~~lks~~--~~~riIlitPpp~de~~~~~~~~e~~~~~~~R 145 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLPEPSSLGQHVPLEEYKDNLRKIVSHLKSLS--PETRIILITPPPVDEEAWEKQEQEPYVLGPER 145 (245)
T ss_pred CceEEEEEecCccccCCCCCCCCCccCHHHHHHHHHHHHHHhhccC--CcceEEEecCCCcCHHHHHHHhccchhccchh
Confidence 348899999999997542 24799999999999997654 556666665444311
Q ss_pred cHHHHHH---HHhhc-cCCCeEEEe-------CCCCC--CCCCCCCCChHHHHHHHHHHHHHHHH
Q 031029 110 YKEKVRE---AQLGI-NLQNVVCVD-------AKGLH--LKEDHLHLTTEAQVKLGHMLAEAYLK 161 (167)
Q Consensus 110 ~~~~vr~---aQ~~~-~~p~~~~i~-------~~gl~--~~~d~~H~~~~g~~~lG~r~a~a~l~ 161 (167)
..+.+.. |-..+ +.-++..|+ +++-+ +..|++||+.+|+..+=..+.+-+.+
T Consensus 146 tNe~~~~Ya~ac~~la~e~~l~~vdlws~~Q~~~dw~~~~ltDGLHlS~~G~~ivf~Ei~kvl~e 210 (245)
T KOG3035|consen 146 TNETVGTYAKACANLAQEIGLYVVDLWSKMQESDDWQTSCLTDGLHLSPKGNKIVFDEILKVLKE 210 (245)
T ss_pred hhhHHHHHHHHHHHHHHHhCCeeeeHHhhhhhcccHHHHHhccceeeccccchhhHHHHHHHHHh
Confidence 1111111 11111 122344444 22221 24799999999998877776665443
No 35
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
Probab=73.32 E-value=20 Score=29.61 Aligned_cols=92 Identities=10% Similarity=0.148 Sum_probs=45.0
Q ss_pred HHHhhcCCCeEE--EEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEE---EEEecCCCCCCCCCHHHHHHH
Q 031029 6 AVVARAEGERVG--LVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKAL---LWYQGESDASTDHDAEAYQQN 80 (167)
Q Consensus 6 ~l~~~~~~~pI~--lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gv---lW~QGEsD~~~~~~~~~Y~~~ 80 (167)
.+.+++++.+|. |...+++++.+..-......=+.+++.+..-++. +.+.|| .|-+=.... . ..-+++
T Consensus 59 ~lk~~~~~lkvlp~i~~gg~~~~~f~~~~~~~~~R~~fi~s~~~~~~~--~~~DGidiD~we~p~~~~----~-~~d~~~ 131 (318)
T cd02876 59 EVRKANKNIKILPRVLFEGWSYQDLQSLLNDEQEREKLIKLLVTTAKK--NHFDGIVLEVWSQLAAYG----V-PDKRKE 131 (318)
T ss_pred HHHhhCCCcEEEeEEEECCCCHHHHHHHHcCHHHHHHHHHHHHHHHHH--cCCCcEEEechhhhcccC----C-HHHHHH
Confidence 455555778887 3333332221221111122223344444333433 566776 464322111 1 245778
Q ss_pred HHHHHHHHHhhCCCCCCCEEEEEee
Q 031029 81 MEAFISNVREDLELPSLPIIQVALA 105 (167)
Q Consensus 81 l~~li~~~R~~~~~~~lP~~~~~l~ 105 (167)
|..|++.+|+.++..... +.+.++
T Consensus 132 ~~~~l~el~~~l~~~~~~-l~~~v~ 155 (318)
T cd02876 132 LIQLVIHLGETLHSANLK-LILVIP 155 (318)
T ss_pred HHHHHHHHHHHHhhcCCE-EEEEEc
Confidence 889999999988754433 334443
No 36
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=69.28 E-value=3.7 Score=31.04 Aligned_cols=77 Identities=17% Similarity=0.290 Sum_probs=43.2
Q ss_pred CCeEEEEecCcccccccc-----cccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCC-------CCCCHHHHHHH
Q 031029 13 GERVGLVPCAVGGTAIKE-----WARGEELYESMVARSKESVNKSGGRIKALLWYQGESDAS-------TDHDAEAYQQN 80 (167)
Q Consensus 13 ~~pI~lI~~a~GGt~i~~-----W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~-------~~~~~~~Y~~~ 80 (167)
..++.+.+.+.||..... |...... ...+......... ....-|+-+=|-+|.. .......+.+.
T Consensus 38 ~~~~~~~n~a~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~lv~i~~G~ND~~~~~~~~~~~~~~~~~~~~ 114 (234)
T PF00657_consen 38 NSGVDVSNYAISGATSDGDLYNLWAQVQNI-SQQISRLLDSKSF--YDPDLVVIWIGTNDYFNNRDSSDNNTSVEEFVEN 114 (234)
T ss_dssp CTTEEEEEEE-TT--CC-HGGCCCCTCHHH-HHHHHHHHHHHHH--HTTSEEEEE-SHHHHSSCCSCSTTHHHHHHHHHH
T ss_pred CCCCCeeccccCCCccccccchhhHHHHHH-HHHhhcccccccc--CCcceEEEecccCcchhhcccchhhhhHhhHhhh
Confidence 678999999999999752 2222111 1111111111111 2345566677888962 22458999999
Q ss_pred HHHHHHHHHhhCC
Q 031029 81 MEAFISNVREDLE 93 (167)
Q Consensus 81 l~~li~~~R~~~~ 93 (167)
++++|+.++ ..+
T Consensus 115 ~~~~i~~l~-~~~ 126 (234)
T PF00657_consen 115 LRNAIKRLR-SNG 126 (234)
T ss_dssp HHHHHHHHH-HTT
T ss_pred hhhhhhHHh-ccC
Confidence 999999999 555
No 37
>PLN03156 GDSL esterase/lipase; Provisional
Probab=68.48 E-value=5.5 Score=33.69 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=23.5
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhh
Q 031029 138 EDHLHLTTEAQVKLGHMLAEAYLKHF 163 (167)
Q Consensus 138 ~d~~H~~~~g~~~lG~r~a~a~l~~~ 163 (167)
.|++||+.++++.+++.+...+++.+
T Consensus 325 WD~~HPTe~a~~~iA~~~~~~l~~~~ 350 (351)
T PLN03156 325 WDSFHPTEKTNQIIANHVVKTLLSKF 350 (351)
T ss_pred ecCCCchHHHHHHHHHHHHHHHHHhh
Confidence 59999999999999999999988764
No 38
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=59.33 E-value=13 Score=30.41 Aligned_cols=39 Identities=26% Similarity=0.534 Sum_probs=28.7
Q ss_pred CeeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEE
Q 031029 54 GRIKALLWYQGESDASTDHDAEAYQQNMEAFISNVREDLELPSLPIIQVA 103 (167)
Q Consensus 54 ~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~ 103 (167)
.++-=+.|.||+.++ .+..+.-|+.||+.. |+-.+++..
T Consensus 45 ~k~IW~~W~QG~e~a---------P~~Vk~ci~s~~k~~--~~~~Vi~lt 83 (276)
T PF05704_consen 45 EKIIWVCWWQGEENA---------PEIVKKCINSWRKNA--PDYEVILLT 83 (276)
T ss_pred CCcEEEEECCCcccc---------CHHHHHHHHHHHHHC--CCCeEEEEC
Confidence 456788999999555 356778889999876 567776653
No 39
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=55.80 E-value=96 Score=25.59 Aligned_cols=85 Identities=12% Similarity=0.152 Sum_probs=44.7
Q ss_pred HHHhhcCCCeEEEEecCcccccccccc---cCchhHHHHHHHHHHhhhccCCeeeEEE--EEe-cCCCCCCCCCHHHHHH
Q 031029 6 AVVARAEGERVGLVPCAVGGTAIKEWA---RGEELYESMVARSKESVNKSGGRIKALL--WYQ-GESDASTDHDAEAYQQ 79 (167)
Q Consensus 6 ~l~~~~~~~pI~lI~~a~GGt~i~~W~---~~~~ly~~~i~~~~~al~~~~~~i~gvl--W~Q-GEsD~~~~~~~~~Y~~ 79 (167)
.|.+++|+++|.+--.+++.+ +.+. .....-+.+++.+..-++. +.+.||- |-. +..+.........-+.
T Consensus 77 ~lk~~~p~lkvl~siGG~~~s--~~f~~~~~~~~~r~~Fi~siv~~l~~--~~fDGidiDwE~p~~~~~~~~~~~~~d~~ 152 (322)
T cd06548 77 KLKQKNPHLKILLSIGGWTWS--GGFSDAAATEASRAKFADSAVDFIRK--YGFDGIDIDWEYPGSGGAPGNVARPEDKE 152 (322)
T ss_pred HHHHhCCCCEEEEEEeCCCCC--CCchhHhCCHHHHHHHHHHHHHHHHh--cCCCeEEECCcCCCCCCCCCCCCChhHHH
Confidence 455556888888665555443 1222 1222234556665554543 5666665 321 1100000001234577
Q ss_pred HHHHHHHHHHhhCCC
Q 031029 80 NMEAFISNVREDLEL 94 (167)
Q Consensus 80 ~l~~li~~~R~~~~~ 94 (167)
+|..||+.+|+.++.
T Consensus 153 ~~~~ll~~Lr~~l~~ 167 (322)
T cd06548 153 NFTLLLKELREALDA 167 (322)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888999999998864
No 40
>PRK09919 anti-adapter protein IraM; Provisional
Probab=52.88 E-value=9.1 Score=27.35 Aligned_cols=53 Identities=23% Similarity=0.354 Sum_probs=29.9
Q ss_pred eeeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHh--hCCCCCCCEEEEEeeCCCC-cHHHHHHHH
Q 031029 55 RIKALLWYQGESDASTDHDAEAYQQNMEAFISNVRE--DLELPSLPIIQVALASGDK-YKEKVREAQ 118 (167)
Q Consensus 55 ~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li~~~R~--~~~~~~lP~~~~~l~~~~~-~~~~vr~aQ 118 (167)
.+|-||||||+-=-..+. .|.-..+ -++....|+-+..+.+++. .|..+++-|
T Consensus 26 nlKlilWY~~d~~L~pG~-----------~i~~~~~gvliNdk~~pItIYnvtpyn~~lW~~lk~~~ 81 (114)
T PRK09919 26 NLKLILWYQADIFLPPGS-----------IITPVKSGVLLNDKPYPITIYNITPFNKALWSLLKSSQ 81 (114)
T ss_pred cceEEEEEeeeEEeCCCC-----------EEEEcCCeEEECCcEeEEEEEEecccCHHHHHHhhccc
Confidence 689999999863222211 0000111 1223357777888888875 666776533
No 41
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=52.66 E-value=12 Score=30.13 Aligned_cols=20 Identities=15% Similarity=0.222 Sum_probs=16.4
Q ss_pred CCCCCCChHHHHHHHHHHHH
Q 031029 138 EDHLHLTTEAQVKLGHMLAE 157 (167)
Q Consensus 138 ~d~~H~~~~g~~~lG~r~a~ 157 (167)
.|++||+.++++.+++.+..
T Consensus 260 wD~~HpTe~~~~~ia~~~~~ 279 (281)
T cd01847 260 ADDVHPTPAGHKLIAQYALS 279 (281)
T ss_pred ccCCCCCHHHHHHHHHHHHH
Confidence 49999999999888776654
No 42
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.
Probab=50.32 E-value=1.1e+02 Score=26.50 Aligned_cols=20 Identities=10% Similarity=0.300 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHhhCCCC
Q 031029 76 AYQQNMEAFISNVREDLELP 95 (167)
Q Consensus 76 ~Y~~~l~~li~~~R~~~~~~ 95 (167)
.-+++|..|++.+|+.++..
T Consensus 166 ~d~~nf~~Ll~elr~~l~~~ 185 (413)
T cd02873 166 EHKEQFTALVRELKNALRPD 185 (413)
T ss_pred hHHHHHHHHHHHHHHHhccc
Confidence 45778889999999998753
No 43
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=49.18 E-value=20 Score=31.25 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=22.6
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhh
Q 031029 138 EDHLHLTTEAQVKLGHMLAEAYLKHF 163 (167)
Q Consensus 138 ~d~~H~~~~g~~~lG~r~a~a~l~~~ 163 (167)
.|.+||+.+.++.+++++++-+.+.+
T Consensus 380 WD~vHPTe~ah~iiA~~~~~~i~~~~ 405 (408)
T PRK15381 380 NDLVHPTQEVHHCFAIMLESFIAHHY 405 (408)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHhh
Confidence 69999999999999999998776554
No 44
>PF14331 ImcF-related_N: ImcF-related N-terminal domain
Probab=47.53 E-value=66 Score=26.03 Aligned_cols=65 Identities=11% Similarity=0.213 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCC----CHHHHHHHHHHHHHHHHhhCCCCCCCEEEEE
Q 031029 36 ELYESMVARSKESVNKSGGRIKALLWYQGESDASTDH----DAEAYQQNMEAFISNVREDLELPSLPIIQVA 103 (167)
Q Consensus 36 ~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~----~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~ 103 (167)
..++.+++.+++.= ..-.+.||+..=.=.|-.... .-..+...+++-++.+++.+|. ++|++++=
T Consensus 8 ~~W~~~L~lL~~~R--~r~PlnGvil~vs~~~Ll~~~~~~r~l~~~a~~lR~rL~el~~~lg~-~~PVYvv~ 76 (266)
T PF14331_consen 8 AEWQAFLDLLRRHR--PRQPLNGVILTVSVDDLLNADEAERELEALARALRQRLEELQRTLGV-RLPVYVVF 76 (266)
T ss_pred HHHHHHHHHHHhcC--CCCCCCEEEEEEEHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHhCC-CCCeEeee
Confidence 45667777665432 235677887654433333221 1378899999999999999997 79998663
No 45
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=44.96 E-value=1.3e+02 Score=22.50 Aligned_cols=54 Identities=22% Similarity=0.362 Sum_probs=38.7
Q ss_pred HHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCC
Q 031029 7 VVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDA 68 (167)
Q Consensus 7 l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~ 68 (167)
+.+...+..|+|+.++-.| +....+..++.++...+.. +..+.|-...||.-|.
T Consensus 61 fl~~l~~KkV~lF~T~G~~-------~~s~~~~~~~~~~~~~~~~-~~~~lg~f~CqGk~~~ 114 (160)
T PF12641_consen 61 FLKKLKGKKVALFGTAGAG-------PDSEYAKKILKNVEALLPK-GNEILGTFMCQGKMDP 114 (160)
T ss_pred HHHHccCCeEEEEEecCCC-------CchHHHHHHHHHHHHhhcc-CCeecceEEeCCcCCH
Confidence 3444357788888777443 3456677888888877754 4799999999998765
No 46
>PF12997 DUF3881: Domain of unknown function, E. rectale Gene description (DUF3881); InterPro: IPR024541 This entry represents proteins of unknown function found primarily in Firmicutes. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=43.90 E-value=11 Score=31.17 Aligned_cols=12 Identities=50% Similarity=1.063 Sum_probs=10.7
Q ss_pred CCeeeEEEEEec
Q 031029 53 GGRIKALLWYQG 64 (167)
Q Consensus 53 ~~~i~gvlW~QG 64 (167)
|-++||.+|+||
T Consensus 272 GRRFKG~IWLQG 283 (283)
T PF12997_consen 272 GRRFKGNIWLQG 283 (283)
T ss_pred CceeceeeccCC
Confidence 459999999998
No 47
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=43.35 E-value=18 Score=28.67 Aligned_cols=98 Identities=11% Similarity=0.047 Sum_probs=51.8
Q ss_pred HHHHHhhcCCC--eEEEEecCcccccccccccC---chhHHHHHHHHHHhhhccC---CeeeEEEEEecCCCCCCC----
Q 031029 4 ANAVVARAEGE--RVGLVPCAVGGTAIKEWARG---EELYESMVARSKESVNKSG---GRIKALLWYQGESDASTD---- 71 (167)
Q Consensus 4 a~~l~~~~~~~--pI~lI~~a~GGt~i~~W~~~---~~ly~~~i~~~~~al~~~~---~~i~gvlW~QGEsD~~~~---- 71 (167)
...|.+. ++. .+.+++-|.||..+..-... ... ..+...+...++... ..-.-++-.-|=+|....
T Consensus 42 ~d~la~~-lg~~~~~~~~N~A~~Ga~~~~~~~~~~~~~~-~~l~~Qv~~f~~~~~~~~~~~~l~~i~~G~ND~~~~~~~~ 119 (270)
T cd01846 42 VEYLAAT-LGLSGLKQGYNYAVGGATAGAYNVPPYPPTL-PGLSDQVAAFLAAHKLRLPPDTLVAIWIGANDLLNALDLP 119 (270)
T ss_pred HHHHHHH-hCCCccCCcceeEecccccCCcccCCCCCCC-CCHHHHHHHHHHhccCCCCCCcEEEEEeccchhhhhcccc
Confidence 3455555 555 46789999999998642210 000 112222222221101 122344556677777542
Q ss_pred ----CCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeC
Q 031029 72 ----HDAEAYQQNMEAFISNVREDLELPSLPIIQVALAS 106 (167)
Q Consensus 72 ----~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~ 106 (167)
.......+.+..+|+.++ +.|. -.|++..+++
T Consensus 120 ~~~~~~~~~~~~~~~~~i~~l~-~~g~--~~i~v~~~p~ 155 (270)
T cd01846 120 QNPDTLVTRAVDNLFQALQRLY-AAGA--RNFLVLNLPD 155 (270)
T ss_pred ccccccHHHHHHHHHHHHHHHH-HCCC--CEEEEeCCCC
Confidence 235667778888888887 4553 3455555543
No 48
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=40.38 E-value=1.9e+02 Score=23.66 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=40.3
Q ss_pred hHHHHHhhcCCCeEEEEecCcccc--cccccccCchhHHHHHHHHHHhhhccCCeeeEEE--EEecCCCCCCCCCHHHHH
Q 031029 3 FANAVVARAEGERVGLVPCAVGGT--AIKEWARGEELYESMVARSKESVNKSGGRIKALL--WYQGESDASTDHDAEAYQ 78 (167)
Q Consensus 3 Fa~~l~~~~~~~pI~lI~~a~GGt--~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvl--W~QGEsD~~~~~~~~~Y~ 78 (167)
|.+.+.+++|++.|.|--.+++.. .+..-......-+.+++.+..-++. +.+.||- |-.- ..++ =.
T Consensus 56 ~~~~~k~~~~~lkvlisiGG~~~~s~~fs~~~~~~~~R~~fi~siv~~l~~--~~fDGidiDWE~P-------~~~~-d~ 125 (299)
T cd02879 56 FTETVKRKNPSVKTLLSIGGGGSDSSAFAAMASDPTARKAFINSSIKVARK--YGFDGLDLDWEFP-------SSQV-EM 125 (299)
T ss_pred HHHHHHHhCCCCeEEEEEeCCCCCCchhhHHhCCHHHHHHHHHHHHHHHHH--hCCCceeecccCC-------CChh-HH
Confidence 555666667888886544444321 1111112222223455555444443 3445443 4211 1122 25
Q ss_pred HHHHHHHHHHHhhCC
Q 031029 79 QNMEAFISNVREDLE 93 (167)
Q Consensus 79 ~~l~~li~~~R~~~~ 93 (167)
++|..|++.+|+.+.
T Consensus 126 ~n~~~ll~elr~~l~ 140 (299)
T cd02879 126 ENFGKLLEEWRAAVK 140 (299)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677788888888875
No 49
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=39.72 E-value=14 Score=21.06 Aligned_cols=9 Identities=33% Similarity=1.206 Sum_probs=5.3
Q ss_pred EEEEEecCC
Q 031029 58 ALLWYQGES 66 (167)
Q Consensus 58 gvlW~QGEs 66 (167)
--+|+|||-
T Consensus 26 RTiWFqGdP 34 (39)
T PF09292_consen 26 RTIWFQGDP 34 (39)
T ss_dssp -EEEESS--
T ss_pred CEEEeeCCC
Confidence 458999984
No 50
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.40 E-value=22 Score=29.20 Aligned_cols=19 Identities=26% Similarity=0.207 Sum_probs=16.1
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 031029 138 EDHLHLTTEAQVKLGHMLA 156 (167)
Q Consensus 138 ~d~~H~~~~g~~~lG~r~a 156 (167)
.|++||+.++++.+++.+.
T Consensus 294 wD~~HpT~~~~~~ia~~~~ 312 (315)
T cd01837 294 WDGVHPTEAANRIIADALL 312 (315)
T ss_pred eCCCChHHHHHHHHHHHHh
Confidence 5899999999988887764
No 51
>KOG0564 consensus 5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism]
Probab=36.37 E-value=97 Score=27.95 Aligned_cols=79 Identities=18% Similarity=0.326 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEEeeCCCCcHHHHHHHHhh-ccCCCeEEEeCCCCCCCCCCCCCChHHHHHHHHHHH
Q 031029 78 QQNMEAFISNVREDLELPSLPIIQVALASGDKYKEKVREAQLG-INLQNVVCVDAKGLHLKEDHLHLTTEAQVKLGHMLA 156 (167)
Q Consensus 78 ~~~l~~li~~~R~~~~~~~lP~~~~~l~~~~~~~~~vr~aQ~~-~~~p~~~~i~~~gl~~~~d~~H~~~~g~~~lG~r~a 156 (167)
.+.|-++++++|+. |. ++|+|-+ +-+..+|....|-+|.. +++|.-.+ + +-+.+-.++++.+..|-.++
T Consensus 193 ~e~flkfv~~cR~~-gi-~~PIvPG-IMPI~~Y~sf~R~~kls~~~IP~~~~-~------~L~piKddDeaVr~~Gvel~ 262 (590)
T KOG0564|consen 193 VETFLKFVKDCRAA-GI-NVPIVPG-IMPIQSYRSFLRIAKLSGVSIPQHLM-D------RLEPIKDDDEAVRNYGVELI 262 (590)
T ss_pred HHHHHHHHHHHHHh-CC-CCCcccc-cccchhHHHHHHHHHHhCCCCCHHHH-H------hcccCCCcHHHHHHHhHHHH
Confidence 35677778888864 44 7887733 33334465567777765 46665211 1 23466677888888888888
Q ss_pred HHHHHhhcCC
Q 031029 157 EAYLKHFVGS 166 (167)
Q Consensus 157 ~a~l~~~y~~ 166 (167)
-.|.+.++.+
T Consensus 263 vemc~kll~~ 272 (590)
T KOG0564|consen 263 VEMCRKLLDS 272 (590)
T ss_pred HHHHHHHHhc
Confidence 7777776644
No 52
>PF11202 PRTase_1: Phosphoribosyl transferase (PRTase); InterPro: IPR011215 This is a family of uncharacterised bacterial proteins.
Probab=35.26 E-value=32 Score=28.01 Aligned_cols=79 Identities=18% Similarity=0.298 Sum_probs=51.2
Q ss_pred hHHHHHhhcCCCeEEEEecCccccccc----ccccC------chhHH-----------HHHHHHHHhhhccCCeeeEEEE
Q 031029 3 FANAVVARAEGERVGLVPCAVGGTAIK----EWARG------EELYE-----------SMVARSKESVNKSGGRIKALLW 61 (167)
Q Consensus 3 Fa~~l~~~~~~~pI~lI~~a~GGt~i~----~W~~~------~~ly~-----------~~i~~~~~al~~~~~~i~gvlW 61 (167)
.+..+.++ .+.+|.||.-|+.||||- .|... -+.|. .++..+ ++ ......|.+
T Consensus 76 la~~i~~~-~g~~~vLVSLaRAGtPiGVLlkR~l~~~~~g~~~~HYsISIIRdRGID~~AL~~I---~~--~H~~~~ivF 149 (257)
T PF11202_consen 76 LAELIIAR-RGQPIVLVSLARAGTPIGVLLKRYLRRMKYGLDLPHYSISIIRDRGIDENALRYI---LA--RHPPESIVF 149 (257)
T ss_pred HHHHHHHh-cCCCeEEEEeeccCCcHHHHHHHHHHHhhcCCCCCceeEEEecCCCCCHHHHHHH---HH--hCCCcceEE
Confidence 35667777 788999999999999984 33322 12231 223333 22 356788888
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhCC
Q 031029 62 YQGESDASTDHDAEAYQQNMEAFISNVREDLE 93 (167)
Q Consensus 62 ~QGEsD~~~~~~~~~Y~~~l~~li~~~R~~~~ 93 (167)
-.|-+--+ ....-|++-++++++.++
T Consensus 150 VDGWTGKG------aI~~eL~~al~~~~~~~~ 175 (257)
T PF11202_consen 150 VDGWTGKG------AITRELKKALAAFNARYG 175 (257)
T ss_pred EecCcccc------HHHHHHHHHHHHHHhhcC
Confidence 88874322 456667777788887777
No 53
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=34.32 E-value=51 Score=22.04 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=30.5
Q ss_pred hHHHHHhhcCCCeEEEEecCccccccc-ccccCchhHHHHHHH
Q 031029 3 FANAVVARAEGERVGLVPCAVGGTAIK-EWARGEELYESMVAR 44 (167)
Q Consensus 3 Fa~~l~~~~~~~pI~lI~~a~GGt~i~-~W~~~~~ly~~~i~~ 44 (167)
+|..|..+.-..||+++.++.||-.+- ...+.-.-|..|+.+
T Consensus 5 ~~afLKnAWaKEPVlvvSf~ig~lavilP~lSPytkYs~miN~ 47 (84)
T PF14987_consen 5 LGAFLKNAWAKEPVLVVSFVIGGLAVILPPLSPYTKYSVMINQ 47 (84)
T ss_pred HHHHHHHhhhcCCeEEeeehhhhhhhhcCCccchHhhhhhccC
Confidence 345566666678999999999998863 555556667777764
No 54
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=32.82 E-value=40 Score=25.92 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=15.0
Q ss_pred chHHHHHhhcCCCeEEEEecCc
Q 031029 2 SFANAVVARAEGERVGLVPCAV 23 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~ 23 (167)
.|-+.|.+.+|+.||.+|....
T Consensus 82 ~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 82 GFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp HHHHHHHTT-SSS-EEEEE---
T ss_pred HHHHHHHHhCCCCCEEEEecCC
Confidence 4778899999999999998554
No 55
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=32.26 E-value=2.1e+02 Score=21.31 Aligned_cols=83 Identities=8% Similarity=0.030 Sum_probs=42.8
Q ss_pred HHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 031029 6 AVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNMEAFI 85 (167)
Q Consensus 6 ~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~~li 85 (167)
.++++.|+++|.+--..+++..-..-......-+.+++.+...++. +.+.||-..= |.-... ...-.++|..|+
T Consensus 57 ~l~~~~~g~kv~~sigg~~~~~~~~~~~~~~~~~~f~~~~~~~v~~--~~~DGidiD~-E~~~~~---~~~~~~~~~~ll 130 (210)
T cd00598 57 ELASKKPGLKVLISIGGWTDSSPFTLASDPASRAAFANSLVSFLKT--YGFDGVDIDW-EYPGAA---DNSDRENFITLL 130 (210)
T ss_pred HHHHhCCCCEEEEEEcCCCCCCCchhhcCHHHHHHHHHHHHHHHHH--cCCCceEEee-eCCCCc---CccHHHHHHHHH
Confidence 4444446888776555444433211122222334555555554543 5566554311 221111 002467899999
Q ss_pred HHHHhhCCC
Q 031029 86 SNVREDLEL 94 (167)
Q Consensus 86 ~~~R~~~~~ 94 (167)
+.+|+.++.
T Consensus 131 ~~lr~~l~~ 139 (210)
T cd00598 131 RELRSALGA 139 (210)
T ss_pred HHHHHHhcc
Confidence 999999875
No 56
>PRK12465 xylose isomerase; Provisional
Probab=31.31 E-value=1.8e+02 Score=25.70 Aligned_cols=75 Identities=13% Similarity=0.240 Sum_probs=48.2
Q ss_pred ccccccccccCchhHHHHHHHHHHhhhc-cCCeeeEEEEEecCCCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCCCCEE
Q 031029 24 GGTAIKEWARGEELYESMVARSKESVNK-SGGRIKALLWYQGESDAST-DHDAEAYQQNMEAFISNVREDLELPSLPII 100 (167)
Q Consensus 24 GGt~i~~W~~~~~ly~~~i~~~~~al~~-~~~~i~gvlW~QGEsD~~~-~~~~~~Y~~~l~~li~~~R~~~~~~~lP~~ 100 (167)
+||..+.|....+--.....++.++... ..-.+-++++|. .|... +.+-..+.++|+.+++.+++......+.++
T Consensus 70 ~~T~~rpw~~~~~~~~~Ak~k~daaFEf~~kLG~~~~~FHD--~D~~Peg~s~~E~~~nld~iv~~~k~~~~~tGikll 146 (445)
T PRK12465 70 PGTRAYPWDVGNTALARAEAKSDAAFEFFTKLGVPYYCFHD--IDLAPDADDIGEYESNLKHMVGIAKQRQADTGIKLL 146 (445)
T ss_pred CccCCCCcccCCCHHHHHHHHHHHHHHHHHHhCCCeeeccc--cccCCCCCCHHHHHHHHHHHHHHHHHHhhhhCceee
Confidence 4566678976655445555666666433 235788999985 34432 234677888899999999987654333333
No 57
>TIGR01624 LRP1_Cterm LRP1 C-terminal domain. This model represents a tightly conserved small domain found in LRP1 and related plant proteins. This family also contains a well-conserved putative zinc finger domain (TIGR01623). The rest of the sequence of most members consists of highly divergent, low-complexity sequence.
Probab=31.18 E-value=32 Score=20.79 Aligned_cols=13 Identities=38% Similarity=0.514 Sum_probs=11.2
Q ss_pred cCCeeeEEEEEec
Q 031029 52 SGGRIKALLWYQG 64 (167)
Q Consensus 52 ~~~~i~gvlW~QG 64 (167)
.|..+||||..||
T Consensus 37 gGHvFkGiLyDqG 49 (50)
T TIGR01624 37 GGHVFKGFLHDQG 49 (50)
T ss_pred CceEEeeEEeccC
Confidence 4578999999998
No 58
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=29.87 E-value=3.2e+02 Score=24.16 Aligned_cols=84 Identities=15% Similarity=0.297 Sum_probs=57.2
Q ss_pred CeEEEEecCccccc-ccccccCchhHHHHHHHHHHhhhccCCeeeEE-----EEEecCCCCCCCCCHHHHHHHHHHHHHH
Q 031029 14 ERVGLVPCAVGGTA-IKEWARGEELYESMVARSKESVNKSGGRIKAL-----LWYQGESDASTDHDAEAYQQNMEAFISN 87 (167)
Q Consensus 14 ~pI~lI~~a~GGt~-i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gv-----lW~QGEsD~~~~~~~~~Y~~~l~~li~~ 87 (167)
-||..++..-|-+- +.-..+++.=|+.+=+.+-.+|+..|..+.|| .| +. .+++..++.|..||..
T Consensus 247 LPV~e~~a~~~~sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW----~~----rtPe~~a~Dl~r~i~~ 318 (456)
T COG3946 247 LPVVEVPAKPGNSDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFW----SE----RTPEQIAADLSRLIRF 318 (456)
T ss_pred CCceeeccCCCCcceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhh----cc----CCHHHHHHHHHHHHHH
Confidence 45655555444122 23466666667777777777787666666665 34 11 3589999999999999
Q ss_pred HHhhCCCCCCCEEEEEeeCC
Q 031029 88 VREDLELPSLPIIQVALASG 107 (167)
Q Consensus 88 ~R~~~~~~~lP~~~~~l~~~ 107 (167)
.+.+|+. .++++++-|-+
T Consensus 319 y~~~w~~--~~~~liGySfG 336 (456)
T COG3946 319 YARRWGA--KRVLLIGYSFG 336 (456)
T ss_pred HHHhhCc--ceEEEEeeccc
Confidence 9999984 77887776653
No 59
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=29.35 E-value=52 Score=23.87 Aligned_cols=21 Identities=33% Similarity=0.271 Sum_probs=17.0
Q ss_pred chHHHHHhhcCCCeEEEEecC
Q 031029 2 SFANAVVARAEGERVGLVPCA 22 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a 22 (167)
.|+++|.+.+|++||.++.=.
T Consensus 76 ~f~~~L~~~~~~ipV~~~DEr 96 (135)
T PF03652_consen 76 KFAEELKKRFPGIPVILVDER 96 (135)
T ss_dssp HHHHHHHHHH-TSEEEEEECS
T ss_pred HHHHHHHHhcCCCcEEEECCC
Confidence 589999999679999998743
No 60
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=29.06 E-value=1.5e+02 Score=26.03 Aligned_cols=89 Identities=12% Similarity=0.127 Sum_probs=54.1
Q ss_pred CCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhh----------ccCCeeeEEEEEecCCCCCCCCCHHHHHHHH
Q 031029 12 EGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVN----------KSGGRIKALLWYQGESDASTDHDAEAYQQNM 81 (167)
Q Consensus 12 ~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~----------~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l 81 (167)
.++|+.|||+=-+--|...|.+-..+++.+.+++...+. ..|... -+...|......+ ...+
T Consensus 145 ~~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~~-----v~v~GNlKfd~~~---~~~~ 216 (419)
T COG1519 145 RGIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAKP-----VVVTGNLKFDIEP---PPQL 216 (419)
T ss_pred cCCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCcc-----eEEecceeecCCC---Chhh
Confidence 599999999999999999999999888888876432111 022211 1222232211111 2235
Q ss_pred HHHHHHHHhhCCCCCCCEEEEEeeCCC
Q 031029 82 EAFISNVREDLELPSLPIIQVALASGD 108 (167)
Q Consensus 82 ~~li~~~R~~~~~~~lP~~~~~l~~~~ 108 (167)
....+.+|..|+.+.-.|+.+.+..+|
T Consensus 217 ~~~~~~~r~~l~~~r~v~iaaSTH~GE 243 (419)
T COG1519 217 AAELAALRRQLGGHRPVWVAASTHEGE 243 (419)
T ss_pred HHHHHHHHHhcCCCCceEEEecCCCch
Confidence 566788999998764444555554443
No 61
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=28.66 E-value=3.2e+02 Score=22.13 Aligned_cols=80 Identities=23% Similarity=0.285 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeCC---------CC------cHHHHHHHHhhc--cCCCeEEEeC----
Q 031029 73 DAEAYQQNMEAFISNVREDLELPSLPIIQVALASG---------DK------YKEKVREAQLGI--NLQNVVCVDA---- 131 (167)
Q Consensus 73 ~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~~---------~~------~~~~vr~aQ~~~--~~p~~~~i~~---- 131 (167)
+.+.-.+.|..+++.+|+. +|++.|+ ..+||- ++ ....+|.|-..+ ..+++.+.++
T Consensus 146 s~~ei~~~l~~~~~~l~~~--nP~~kii-lTVSPVrl~~T~~~~d~~~an~~SKs~Lr~a~~~l~~~~~~v~YFPSYEiv 222 (251)
T PF08885_consen 146 SVEEILEDLEAIIDLLRSI--NPDIKII-LTVSPVRLIATFRDRDGLVANQYSKSTLRAAAHELVRAFDDVDYFPSYEIV 222 (251)
T ss_pred CHHHHHHHHHHHHHHHHhh--CCCceEE-EEeccchhhcccccccchhhhhhhHHHHHHHHHHHHhcCCCceEcchHhhc
Confidence 3566667788889999876 5788887 334431 11 123455544443 3577766553
Q ss_pred -CCCC----CCCCCCCCChHHHHHHHHHH
Q 031029 132 -KGLH----LKEDHLHLTTEAQVKLGHML 155 (167)
Q Consensus 132 -~gl~----~~~d~~H~~~~g~~~lG~r~ 155 (167)
+.+. +..|-+|++..+...+.++|
T Consensus 223 ~d~lrdyrfy~~D~~Hps~~aV~~I~~~F 251 (251)
T PF08885_consen 223 MDELRDYRFYAEDMRHPSPQAVDYIWERF 251 (251)
T ss_pred cCcccccccccccCCCCCHHHHHHHHhhC
Confidence 2221 35789999999887776653
No 62
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=27.49 E-value=1.6e+02 Score=23.75 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=35.0
Q ss_pred CCeeeEEEEE-ecCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeeC
Q 031029 53 GGRIKALLWY-QGESDASTD--HDAEAYQQNMEAFISNVREDLELPSLPIIQVALAS 106 (167)
Q Consensus 53 ~~~i~gvlW~-QGEsD~~~~--~~~~~Y~~~l~~li~~~R~~~~~~~lP~~~~~l~~ 106 (167)
|+.+-++=+. .|+|+.... .+.+.|.+.+..+|+.++..-..+..|+++++.|-
T Consensus 87 Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSm 143 (330)
T PLN02298 87 GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESM 143 (330)
T ss_pred CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecc
Confidence 4444444443 688874221 24678889999999999875433457888777653
No 63
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=27.17 E-value=3e+02 Score=24.88 Aligned_cols=82 Identities=16% Similarity=0.152 Sum_probs=53.5
Q ss_pred CCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhccCCeeeEEEEE-ecCCCCCCCCCHHHHHH-HHHHHHHHHH
Q 031029 12 EGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNKSGGRIKALLWY-QGESDASTDHDAEAYQQ-NMEAFISNVR 89 (167)
Q Consensus 12 ~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~~~~~i~gvlW~-QGEsD~~~~~~~~~Y~~-~l~~li~~~R 89 (167)
...||+||+....+.-|-+..|+.++-..+++ .|+.+=.+=|- .|+++... ..++|.. .+...|+.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~--------qGf~V~~iDwrgpg~s~~~~--~~ddY~~~~i~~al~~v~ 256 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVE--------QGHTVFVISWRNPDASQADK--TFDDYIRDGVIAALEVVE 256 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHH--------CCcEEEEEECCCCCcccccC--ChhhhHHHHHHHHHHHHH
Confidence 36899999998888887777776544333332 25666666664 26665543 3456775 5889999999
Q ss_pred hhCCCCCCCEEEEEee
Q 031029 90 EDLELPSLPIIQVALA 105 (167)
Q Consensus 90 ~~~~~~~lP~~~~~l~ 105 (167)
+.++. -++.+++-+
T Consensus 257 ~~~g~--~kv~lvG~c 270 (532)
T TIGR01838 257 AITGE--KQVNCVGYC 270 (532)
T ss_pred HhcCC--CCeEEEEEC
Confidence 88864 445555544
No 64
>COG4124 ManB Beta-mannanase [Carbohydrate transport and metabolism]
Probab=26.65 E-value=4.1e+02 Score=22.80 Aligned_cols=65 Identities=17% Similarity=0.284 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHhhhccC-CeeeEEEEEecCCCCCC-----CCCHHHHHHHHHHHHHHHHhhCCCCCCCEE
Q 031029 36 ELYESMVARSKESVNKSG-GRIKALLWYQGESDAST-----DHDAEAYQQNMEAFISNVREDLELPSLPII 100 (167)
Q Consensus 36 ~ly~~~i~~~~~al~~~~-~~i~gvlW~QGEsD~~~-----~~~~~~Y~~~l~~li~~~R~~~~~~~lP~~ 100 (167)
.-|+.|++++-.++...+ ....-|.|-|=-.+... ..++++|....+.+.+.+|++=+.+-+.|+
T Consensus 158 ~~Y~~~~ski~D~~~~~~s~~~vtiy~r~~mE~n~~~FwWg~~d~~~yk~lw~~~~dy~~~~r~l~~lk~~ 228 (355)
T COG4124 158 GNYDAMMSKIGDALAAYKSNQVVTIYWRPEMEMNSGWFWWGFWDPNQYKQLWIRLHDYLRKSRGLPWLKFM 228 (355)
T ss_pred hhHHHHHHHHHHHHHHhcCCCceEEEechhhccCCCeeeeccCCHHHHHHHHHHHHHHHhhccCCCeeEEE
Confidence 458999998776665433 33456667663333321 156899999999999999998332344444
No 65
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=26.32 E-value=1.1e+02 Score=25.28 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=21.2
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHH
Q 031029 138 EDHLHLTTEAQVKLGHMLAEAYLK 161 (167)
Q Consensus 138 ~d~~H~~~~g~~~lG~r~a~a~l~ 161 (167)
..+.||+.+-+++||+.+.+.+++
T Consensus 255 ~~g~~f~~~~~~~~G~~~c~~l~~ 278 (278)
T cd06906 255 YKGLQIGTKELEEMGAKFCVGLLR 278 (278)
T ss_pred cCceecCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999998763
No 66
>KOG2749 consensus mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1 [RNA processing and modification]
Probab=25.88 E-value=1.5e+02 Score=25.78 Aligned_cols=67 Identities=24% Similarity=0.359 Sum_probs=40.7
Q ss_pred CCCeEEEEecCcccccccccccC----------------------chhHHHHHHHHHHhhhc----------cCCeeeEE
Q 031029 12 EGERVGLVPCAVGGTAIKEWARG----------------------EELYESMVARSKESVNK----------SGGRIKAL 59 (167)
Q Consensus 12 ~~~pI~lI~~a~GGt~i~~W~~~----------------------~~ly~~~i~~~~~al~~----------~~~~i~gv 59 (167)
++.|...|+.+.+.+.|+.-..- -.||+.+++++..++++ .|..|.-.
T Consensus 141 vgQ~sitiPGsiaA~~i~~~~D~~eGf~l~~pLV~~FG~~sp~~N~~LY~~~~s~La~v~~~~~~~n~~ar~sG~iInT~ 220 (415)
T KOG2749|consen 141 VGQGSITIPGSIAAIPIEMPLDVIEGFSLTAPLVYNFGLTSPSTNLELYKALVSELAEVLKQRLSLNPEARVSGCIINTC 220 (415)
T ss_pred CCCCceecccchhheecccccchhhCcccCCceeeeccCCCCCcCHHHHHHHHHHHHHHHHHHhccCchhcccceEEecc
Confidence 46676778888888887642110 16899999887776653 23344445
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHH
Q 031029 60 LWYQGESDASTDHDAEAYQQNMEAFISNVR 89 (167)
Q Consensus 60 lW~QGEsD~~~~~~~~~Y~~~l~~li~~~R 89 (167)
-|-+|| .|+..+. .|+.++
T Consensus 221 g~i~~e----------gy~~llh-ai~~f~ 239 (415)
T KOG2749|consen 221 GWIEGE----------GYAALLH-AIKAFE 239 (415)
T ss_pred ceeccc----------cHHHHHH-HHHHcC
Confidence 566655 4666655 444443
No 67
>smart00636 Glyco_18 Glycosyl hydrolase family 18.
Probab=25.70 E-value=3.7e+02 Score=21.92 Aligned_cols=80 Identities=14% Similarity=0.119 Sum_probs=40.3
Q ss_pred HHHhhcCCCeEEEEecCcccccccccc---cCchhHHHHHHHHHHhhhccCCeeeEEEEEecCCCCCCCCCHHHHHHHHH
Q 031029 6 AVVARAEGERVGLVPCAVGGTAIKEWA---RGEELYESMVARSKESVNKSGGRIKALLWYQGESDASTDHDAEAYQQNME 82 (167)
Q Consensus 6 ~l~~~~~~~pI~lI~~a~GGt~i~~W~---~~~~ly~~~i~~~~~al~~~~~~i~gvlW~QGEsD~~~~~~~~~Y~~~l~ 82 (167)
.|.+++|+++|.+.-..++.+ +.|. .....-+.+++.+..-++. +.+.||-.. =|.-.... .-+++|.
T Consensus 59 ~l~~~~~~~kvl~svgg~~~s--~~f~~~~~~~~~r~~fi~~i~~~~~~--~~~DGidiD-wE~~~~~~----~d~~~~~ 129 (334)
T smart00636 59 ALKKKNPGLKVLLSIGGWTES--DNFSSMLSDPASRKKFIDSIVSFLKK--YGFDGIDID-WEYPGARG----DDRENYT 129 (334)
T ss_pred HHHHhCCCCEEEEEEeCCCCC--cchhHHHCCHHHHHHHHHHHHHHHHH--cCCCeEEEC-CcCCCCCc----cHHHHHH
Confidence 355555788888744333332 1222 1122223455555444543 567777542 12211100 1245788
Q ss_pred HHHHHHHhhCCC
Q 031029 83 AFISNVREDLEL 94 (167)
Q Consensus 83 ~li~~~R~~~~~ 94 (167)
.|++.+|+.++.
T Consensus 130 ~ll~~lr~~l~~ 141 (334)
T smart00636 130 ALLKELREALDK 141 (334)
T ss_pred HHHHHHHHHHHH
Confidence 888888888763
No 68
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=24.79 E-value=3.7e+02 Score=21.60 Aligned_cols=76 Identities=9% Similarity=0.072 Sum_probs=37.9
Q ss_pred HHHhhcCCCeEEEEecCccccccccc-ccC--chhHHHHHHHHHHhhhccCCeeeEE--EEEecCCCCCCCCCHHHHHHH
Q 031029 6 AVVARAEGERVGLVPCAVGGTAIKEW-ARG--EELYESMVARSKESVNKSGGRIKAL--LWYQGESDASTDHDAEAYQQN 80 (167)
Q Consensus 6 ~l~~~~~~~pI~lI~~a~GGt~i~~W-~~~--~~ly~~~i~~~~~al~~~~~~i~gv--lW~QGEsD~~~~~~~~~Y~~~ 80 (167)
.|.+++|+..|.|--.+|+.++-... .+. ....+.+++.+..-++. +.+.|| =|-.... + +.+
T Consensus 63 ~lK~~~p~lKvllSiGG~~~~~~~~~~~~~~~~~~~~~fv~S~~~~l~~--~~fDGiDiDwE~~~~------d----~~~ 130 (253)
T cd06544 63 SIKAQHPNVKVVISIGGRGVQNNPTPFDPSNVDSWVSNAVSSLTSIIQT--YNLDGIDIDYEHFPA------D----PDT 130 (253)
T ss_pred HHHHhCCCcEEEEEeCCCCCCCCccccCchhhhhHHHHHHHHHHHHHHH--hCCCceeeecccCCc------C----HHH
Confidence 55666789999986666654431111 111 12224455555444544 455554 5643322 2 344
Q ss_pred HHHHHHHHHhhCC
Q 031029 81 MEAFISNVREDLE 93 (167)
Q Consensus 81 l~~li~~~R~~~~ 93 (167)
|..|+..+|+.+.
T Consensus 131 f~~ll~~l~~~l~ 143 (253)
T cd06544 131 FVECIGQLITELK 143 (253)
T ss_pred HHHHHHHHHHHhh
Confidence 5555555555554
No 69
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=24.50 E-value=86 Score=25.63 Aligned_cols=23 Identities=22% Similarity=0.342 Sum_probs=21.1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHH
Q 031029 139 DHLHLTTEAQVKLGHMLAEAYLK 161 (167)
Q Consensus 139 d~~H~~~~g~~~lG~r~a~a~l~ 161 (167)
.+.||+.+.+++||+.++++++.
T Consensus 237 ~~~~f~~~~~~~~G~~~~~~lld 259 (261)
T cd06907 237 KGTHFTTSDLESMGYHFCDTLLD 259 (261)
T ss_pred CCcccCHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999875
No 70
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=23.85 E-value=2.3e+02 Score=19.55 Aligned_cols=64 Identities=20% Similarity=0.389 Sum_probs=23.9
Q ss_pred chHHHHHhhcCCCeEEEEecCcccccccccccCchhHHHHHHHHHHhhhc-cCCeeeEEEEEecCCCCC
Q 031029 2 SFANAVVARAEGERVGLVPCAVGGTAIKEWARGEELYESMVARSKESVNK-SGGRIKALLWYQGESDAS 69 (167)
Q Consensus 2 ~Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~~~~ly~~~i~~~~~al~~-~~~~i~gvlW~QGEsD~~ 69 (167)
+|.+-|... ++++-+.+ .++...+-|..........-..+..=++. ...+-...-|..|++++.
T Consensus 15 aF~DYl~sq--gI~~~i~~--~~~~~~~lwl~de~~~~~a~~el~~Fl~nP~~~rYqaASWq~g~~~~~ 79 (101)
T PF12122_consen 15 AFIDYLASQ--GIELQIEP--EGQGQFALWLHDEEHLEQAEQELEEFLQNPNDPRYQAASWQTGSTRTQ 79 (101)
T ss_dssp HHHHHHHHT--T--EEEE---SSSE--EEEES-GGGHHHHHHHHHHHHHS-SS----------------
T ss_pred HHHHHHHHC--CCeEEEEE--CCCCceEEEEeCHHHHHHHHHHHHHHHHCCCCHHHHHHHHhcCCccCc
Confidence 477777776 68888777 55555888998766544333333222332 346888999999999984
No 71
>PF02784 Orn_Arg_deC_N: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; InterPro: IPR022644 These enzymes are collectively known as group IV decarboxylases []. Pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates can be classified into two different families on the basis of sequence similarities [, ]. Members of this family while most probably evolutionary related, do not share extensive regions of sequence similarities. The proteins contain a conserved lysine residue which is known, in mouse ODC [], to be the site of attachment of the pyridoxal-phosphate group. The proteins also contain a stretch of three consecutive glycine residues and has been proposed to be part of a substrate- binding region [].; GO: 0003824 catalytic activity; PDB: 2OO0_A 2ON3_A 1D7K_B 3VAB_A 2J66_A 3C5Q_A 2QGH_A 1TWI_B 1TUF_A 3N2O_A ....
Probab=23.17 E-value=3.2e+02 Score=21.38 Aligned_cols=46 Identities=28% Similarity=0.493 Sum_probs=30.0
Q ss_pred CCeeeEEEEEecCCCCCCCCCHHHHHHH---HHHHHHHHHhhCCCCCCCEEEE
Q 031029 53 GGRIKALLWYQGESDASTDHDAEAYQQN---MEAFISNVREDLELPSLPIIQV 102 (167)
Q Consensus 53 ~~~i~gvlW~QGEsD~~~~~~~~~Y~~~---l~~li~~~R~~~~~~~lP~~~~ 102 (167)
+..+.|+-.|.|. ... +.+.|... +..++..+++++|.+++.++=+
T Consensus 154 ~l~l~GlH~H~gS-~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~idi 202 (251)
T PF02784_consen 154 GLRLVGLHFHVGS-QIL---DAEAFRQAIERLLDLAEELKEELGFEDLEFIDI 202 (251)
T ss_dssp TEEEEEEEE-HCS-SBS---SCHHHHHHHHHHHHHHHHHHHHTTTTT-SEEEE
T ss_pred eEEEEEeeeeecc-CCc---chHHHHHHHHHHHHHHhhhccccccccccEEEe
Confidence 4689999999995 332 34555544 4555688888888756888843
No 72
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=21.33 E-value=5e+02 Score=21.96 Aligned_cols=47 Identities=19% Similarity=0.188 Sum_probs=29.1
Q ss_pred HHHHHHHhhccCCCeEEEeCCCCCCCCCCCCCC-------hHHHHHHHHHHHHHHHHh
Q 031029 112 EKVREAQLGINLQNVVCVDAKGLHLKEDHLHLT-------TEAQVKLGHMLAEAYLKH 162 (167)
Q Consensus 112 ~~vr~aQ~~~~~p~~~~i~~~gl~~~~d~~H~~-------~~g~~~lG~r~a~a~l~~ 162 (167)
..|+||+. +.+|-+.++||.-- ++.+.|. -.+...+=.-+++++++-
T Consensus 166 ~AI~EA~k-l~IPvIaivDTn~d---p~~IdypIP~NDds~~si~li~~~la~ai~~g 219 (326)
T PRK12311 166 IAIQEAQR-LGIPVAAIVDTNCD---PDGITYPVPGNDDAGRAIALYCDLIARAAIDG 219 (326)
T ss_pred HHHHHHHH-cCCCEEEEeeCCCC---ccccceeecCCCchHHHHHHHHHHHHHHHHHH
Confidence 47999985 58899999998532 3333331 133445556666666654
No 73
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=20.88 E-value=1e+02 Score=25.04 Aligned_cols=21 Identities=33% Similarity=0.520 Sum_probs=19.8
Q ss_pred CCCChHHHHHHHHHHHHHHHH
Q 031029 141 LHLTTEAQVKLGHMLAEAYLK 161 (167)
Q Consensus 141 ~H~~~~g~~~lG~r~a~a~l~ 161 (167)
.||+.+.+++||+.++++++.
T Consensus 239 ~~f~~~~~~~~G~~~~~~~~~ 259 (261)
T cd06908 239 TPYTEEGYMRLGRNLARTFLD 259 (261)
T ss_pred cccCHHHHHHHHHHHHHHHHh
Confidence 799999999999999999875
No 74
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=20.11 E-value=67 Score=27.36 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=26.8
Q ss_pred hHHHHHhhcCCCeEEEEecCccccccccccc
Q 031029 3 FANAVVARAEGERVGLVPCAVGGTAIKEWAR 33 (167)
Q Consensus 3 Fa~~l~~~~~~~pI~lI~~a~GGt~i~~W~~ 33 (167)
|.+.+.+.++..|+..|.++-||+-+..|..
T Consensus 137 ~l~~l~~~~~~r~~~avG~SLGgnmLa~ylg 167 (345)
T COG0429 137 FLDWLKARFPPRPLYAVGFSLGGNMLANYLG 167 (345)
T ss_pred HHHHHHHhCCCCceEEEEecccHHHHHHHHH
Confidence 5667777789999999999999999988874
Done!