BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031031
(167 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E09|A Chain A, Solution Structure Of The Major Cherry Allergen Pru Av 1
Length = 159
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Query: 16 FVTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
F +++ P R+FKA +LD+ N+ P++ +IK E EGDG GTIK+I + EG + Y K
Sbjct: 9 FTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
H++D++DKE + Y IEGD D+ LE +++E K GG + K T + K VE
Sbjct: 69 HKIDSIDKENYSYSYTLIEGDALGDT-LEKISYETKLVASPSGGSIIKSTSHYHTKGNVE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
IK ++ K K +++++E +LK +P Y
Sbjct: 128 IKEEHVKAGKEKASNLFKLIETYLKGHPDAY 158
>pdb|1H2O|A Chain A, Solution Structure Of The Major Cherry Allergen Pru Av 1
Mutant E45w
Length = 159
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 16 FVTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
F +++ P R+FKA +LD+ N+ P++ +IK E GDG GTIK+I + EG + Y K
Sbjct: 9 FTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILWGDGGPGTIKKITFGEGSQYGYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
H++D++DKE + Y IEGD D+ LE +++E K GG + K T + K VE
Sbjct: 69 HKIDSIDKENYSYSYTLIEGDALGDT-LEKISYETKLVASPSGGSIIKSTSHYHTKGNVE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
IK ++ K K +++++E +LK +P Y
Sbjct: 128 IKEEHVKAGKEKASNLFKLIETYLKGHPDAY 158
>pdb|1FM4|A Chain A, Crystal Structure Of The Birch Pollen Allergen Bet V 1l
Length = 159
Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ RMFKA ILD + P++ +I S+E EG+G GTIK+IN+ EG +Y K
Sbjct: 9 ATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G + LE +++EIK GGCV KI+ + K E
Sbjct: 69 DRVDEVDHTNFKYNYSVIEG-GPVGDTLEKISNEIKIVATPDGGCVLKISNKYHTKGNHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K ++ K + VE++L A+ Y
Sbjct: 128 VKAEQVKASKEMGETLLRAVESYLLAHSDAY 158
>pdb|2LPX|A Chain A, Solution Structure Of Strawberry Allergen Fra A 1e
Length = 170
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 14 QSFVTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRY 73
F + + ++FKA +LD+ N+ P++ ++K E EGDG GTIK+I + EG Y
Sbjct: 8 NEFTSDIPAPKLFKAFVLDADNLIPKIAPQAVKCAEILEGDGGPGTIKKITFGEGSHYGY 67
Query: 74 TKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEG 133
KH++ ++DK Y IEGD ++ +E + +E K GG + K T + K
Sbjct: 68 VKHKIHSIDKVNHTYSYSLIEGDALSEN-IEKIDYETKLVSAPHGGTIIKTTSKYHTKGD 126
Query: 134 VEIKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
VEIK ++ K K +++++E +LK +P Y
Sbjct: 127 VEIKEEHVKAGKEKAAHLFKLIEGYLKDHPSEY 159
>pdb|3IE5|A Chain A, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
pdb|3IE5|B Chain B, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
Length = 165
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 2/150 (1%)
Query: 18 TQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKHR 77
+ ++P R+FKAL+L+ H + + KS E EGDG VGT+ +I +++G + Y H+
Sbjct: 18 SPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFVDGHPLTYMLHK 77
Query: 78 VDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIK 137
D +D F CKY EGD D+ +E + +E+K E G GG KIT + K G +
Sbjct: 78 FDEIDAANFYCKYTLFEGDVLRDN-IEKVVYEVKLEAVG-GGSKGKITVTYHPKPGCTVN 135
Query: 138 GIDIELVKHKPLGMYEVVEAHLKAYPQLYA 167
++++ + K Y+ VE +L A P+++A
Sbjct: 136 EEEVKIGEKKAYEFYKQVEEYLAANPEVFA 165
>pdb|4A84|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
F30v Mutant In Complex With Deoxycholate
Length = 159
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ R+FKA ILD N+ P++ +I S+E EG+G GTIK+I++ EG +Y K
Sbjct: 9 TTSVIPAARLFKAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G I LE +++EIK GG + KI+ + K E
Sbjct: 69 DRVDEVDHTNFKYNYSVIEG-GPIGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K ++ K + VE++L A+ Y
Sbjct: 128 VKAEQVKASKEMGETLLRAVESYLLAHSDAY 158
>pdb|1FSK|A Chain A, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|D Chain D, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|G Chain G, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|J Chain J, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1BV1|A Chain A, Birch Pollen Allergen Bet V 1
pdb|1BTV|A Chain A, Structure Of Bet V 1, Nmr, 20 Structures
Length = 159
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ R+FKA ILD N+ P++ +I S+E EG+G GTIK+I++ EG +Y K
Sbjct: 9 TTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGLPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G I LE +++EIK GG + KI+ + K E
Sbjct: 69 DRVDEVDHTNFKYNYSVIEG-GPIGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K ++ K + VE++L A+ Y
Sbjct: 128 VKAEQVKASKEMGETLLRAVESYLLAHSDAY 158
>pdb|4A80|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With 8-Anilinonaphthalene-1-Sulfonate (Ans)
pdb|4A81|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Ternary Complex With 8-Anilinonaphthalene-1-Sulfonate
( Ans) And Deoxycholic Acid
pdb|4A83|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Deoxycholate.
pdb|4A85|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Kinetin.
pdb|4A86|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Ternary Complex With Kinetin And
8-Anilinonaphthalene-1- Sulfonate (Ans)
pdb|4A87|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Naringenin.
pdb|4A88|A Chain A, Crystal Structure Of Native Major Birch Pollen Allergen
Bet V 1 Isoform A
pdb|4A8G|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Dimethylbenzylammonium Propane Sulfonate
Length = 159
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ R+FKA ILD N+ P++ +I S+E EG+G GTIK+I++ EG +Y K
Sbjct: 9 TTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G I LE +++EIK GG + KI+ + K E
Sbjct: 69 DRVDEVDHTNFKYNYSVIEG-GPIGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K ++ K + VE++L A+ Y
Sbjct: 128 VKAEQVKASKEMGETLLRAVESYLLAHSDAY 158
>pdb|4A8U|A Chain A, Crystal Structure Of Native Birch Pollen Allergen Bet V 1
Isoform J
pdb|4A8V|A Chain A, Crystal Structure Of Birch Pollen Allergen Bet V 1 Isoform
J In Complex With 8-Anilinonaphthalene-1-Sulfonate (Ans)
Length = 159
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ R+FKA ILD N+ P++ +I S+E EG+G GTIK+I++ EG +Y K
Sbjct: 9 ATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G + LE +++EIK GG + KI + K E
Sbjct: 69 DRVDEVDHTNFKYSYSVIEG-GPVGDTLEKISNEIKIVATPNGGSILKINNKYHTKGDHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K I+ K + VE++L A+ Y
Sbjct: 128 VKAEQIKASKEMGETLLRAVESYLLAHSDAY 158
>pdb|1B6F|A Chain A, Birch Pollen Allergen Bet V 1
Length = 159
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ R+FKA ILD N+ P++ +I S+E EG+G GTIK+I++ EG +Y K
Sbjct: 9 TTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G I LE +++EIK GG + KI+ + K E
Sbjct: 69 DRVDEVDHTNFKYNYSVIEG-GPIGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K ++ K + VE++L A+ Y
Sbjct: 128 VKAEQVKASKELGETLLRAVESYLLAHSDAY 158
>pdb|1LLT|A Chain A, Birch Pollen Allergen Bet V 1 Mutant E45s
Length = 159
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ R+FKA ILD N+ P++ +I S+E G+G GTIK+I++ EG +Y K
Sbjct: 9 TTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENISGNGGPGTIKKISFPEGLPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G I LE +++EIK GG + KI+ + K E
Sbjct: 69 DRVDEVDHTNFKYNYSVIEG-GPIGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K ++ K + VE++L A+ Y
Sbjct: 128 VKAEQVKASKEMGETLLRAVESYLLAHSDAY 158
>pdb|1QMR|A Chain A, Birch Pollen Allergen Bet V 1 Mutant N28t, K32q, E45s,
P108g
Length = 159
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 17 VTQVSPS-RMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
T V P+ R+FKA ILD + P++ +I S+E G+G GTIK+I++ EG +Y K
Sbjct: 9 TTSVIPAARLFKAFILDGDTLFPQVAPQAISSVENISGNGGPGTIKKISFPEGLPFKYVK 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
RVD +D F Y IEG G I LE +++EIK G GG + KI+ + K E
Sbjct: 69 DRVDEVDHTNFKYNYSVIEG-GPIGDTLEKISNEIKIVATGDGGSILKISNKYHTKGDHE 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+K ++ K + VE++L A+ Y
Sbjct: 128 VKAEQVKASKEMGETLLRAVESYLLAHSDAY 158
>pdb|2K7H|A Chain A, Nmr Solution Structure Of Soybean Allergen Gly M 4
Length = 157
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 18 TQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKHR 77
+ V+P+ ++KAL+ D+ N+ P+ L S KS+E EG+G GTIK+I ++E GE ++ H+
Sbjct: 11 SPVAPATLYKALVTDADNVIPKAL-DSFKSVENVEGNGGPGTIKKITFLEDGETKFVLHK 69
Query: 78 VDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIK 137
++++D+ Y + G D+ E +T + K GG K+T ++ K E
Sbjct: 70 IESIDEANLGYSYSVVGGAALPDTA-EKITFDSKLVAGPNGGSAGKLTVKYETKGDAEPN 128
Query: 138 GIDIELVKHKPLGMYEVVEAHLKAYPQ 164
+++ K K +++ +EA+L A+P
Sbjct: 129 QDELKTGKAKADALFKAIEAYLLAHPD 155
>pdb|1XDF|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2a From Yellow Lupine
pdb|1XDF|B Chain B, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2a From Yellow Lupine
Length = 157
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 84/148 (56%), Gaps = 2/148 (1%)
Query: 17 VTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKH 76
+ ++P+R++KAL+ D+ I P+ + +I+SIE EG+G GTIK++ IEGGE +Y H
Sbjct: 10 TSTIAPARLYKALVKDADAIIPKAV-EAIQSIETVEGNGGPGTIKKLTLIEGGETKYVLH 68
Query: 77 RVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEI 136
+++A+D+ Y + G G D+ +E ++ E K GG + K+T + K +
Sbjct: 69 KIEAVDEANLRYNYSIVGGVGLPDT-IEKISFETKLVEGANGGSIGKVTIKIETKGDAQP 127
Query: 137 KGIDIELVKHKPLGMYEVVEAHLKAYPQ 164
+ + K + ++ +E +L A+P+
Sbjct: 128 NEEEGKAAKARGDAFFKAIENYLSAHPE 155
>pdb|2QIM|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2b From Yellow Lupine In Complex With Cytokinin
pdb|3E85|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2b From Yellow Lupine In Complex With
Diphenylurea
Length = 158
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Query: 16 FVTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
+ + ++P++++KAL+ D+ I P+ + +I+S+E EG+G GTIK++ +IEGGE +Y
Sbjct: 10 YTSTIAPAKLYKALVTDADIIIPKAV-ETIQSVEIVEGNGGPGTIKKLTFIEGGESKYVL 68
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
H+++A+D+ Y + G G D+ +E ++ E K GG + K+T + K +
Sbjct: 69 HKIEAIDEANLGYNYSIVGGVGLPDT-IEKISFETKLVEGANGGSIGKVTIKIETKGDAQ 127
Query: 136 IKGIDIELVKHKPLGMYEVVEAHLKAYP 163
+ + K + ++ +E++L A+P
Sbjct: 128 PNEEEGKAAKARGDAFFKAIESYLSAHP 155
>pdb|1IFV|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1b From Yellow Lupine
pdb|1IFV|B Chain B, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1b From Yellow Lupine
Length = 155
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 18 TQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKHR 77
+ V+ +++FKAL DS +I P+++ I+S+E EG+G GT+K+I GG Y H+
Sbjct: 11 SAVAQAKLFKALTKDSDDIIPKVI-EQIQSVEIVEGNGGPGTVKKITASHGGHTSYVLHK 69
Query: 78 VDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIK 137
+DA+D+ F Y + G G +D LE +T E K GG + KI F K V
Sbjct: 70 IDAIDEASFEYNYSIVGGTG-LDESLEKITFESKLLSGPDGGSIGKIKVKFHTKGDVLSD 128
Query: 138 GIDIELVKHKPLGMYEVVEAHLKAYPQ 164
+ E K + G+++ VE ++ A P
Sbjct: 129 AVR-EEAKARGTGLFKAVEGYVLANPN 154
>pdb|1ICX|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1a From Yellow Lupine
Length = 155
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 18 TQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKHR 77
+ V+P++++KAL DS I P+++ I+S+E EG+G GTIK+I I G + H+
Sbjct: 11 STVAPAKLYKALTKDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIHDGHTSFVLHK 69
Query: 78 VDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIK 137
+DA+D+ Y I G+G +D LE +++E K GG + KI F K V +
Sbjct: 70 LDAIDEANLTYNYSIIGGEG-LDESLEKISYESKILPGPDGGSIGKINVKFHTKGDVLSE 128
Query: 138 GIDIELVKHKPLGMYEVVEAHLKAYP 163
+ + K K LG+++ +E ++ A+P
Sbjct: 129 TVR-DQAKFKGLGLFKAIEGYVLAHP 153
>pdb|1TW0|A Chain A, Native Crystal Structure Of Spe16
pdb|1TW0|B Chain B, Native Crystal Structure Of Spe16
pdb|1TXC|A Chain A, Complex Crystal Structure Of Spe16 With Ans
pdb|1TXC|B Chain B, Complex Crystal Structure Of Spe16 With Ans
Length = 157
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 18 TQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKHR 77
+ V+P++++KAL DS I ++ I+SIE EG+G VGTIK+I EG + + +
Sbjct: 11 SSVAPAKLYKALTKDSDTIAQKI-DGPIQSIELVEGNGGVGTIKKITANEGDKTSFVLQK 69
Query: 78 VDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIK 137
VDA+D+ Y + G G +S LE L+ E K GG + K+T F K +
Sbjct: 70 VDAIDEANLGYDYSIVGGTGLPES-LEKLSFETKVVAGSGGGSISKVTLKFHTKGDAPLS 128
Query: 138 GIDIELVKHKPLGMYEVVEAHLKAYPQLY 166
+ K G ++ +E ++ A P Y
Sbjct: 129 DAVRDDALAKGAGFFKAIEGYVLANPAEY 157
>pdb|2BK0|A Chain A, Crystal Structure Of The Major Celery Allergen Api G 1
pdb|2BK0|B Chain B, Crystal Structure Of The Major Celery Allergen Api G 1
Length = 154
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 16 FVTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
+ VS ++F+ ++D + P+ + KS+E +GDG GT+K I +GG I
Sbjct: 10 LTSSVSAEKIFQGFVIDVDTVLPKAAPGAYKSVE-IKGDGGPGTLKIITLPDGGPITTMT 68
Query: 76 HRVDALDKEKFMCKYRFIEGD---GFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKE 132
R+D ++KE Y I+GD GFI+S + + + GG +CK T F K
Sbjct: 69 LRIDGVNKEALTFDYSVIDGDILLGFIES----IENHVVLVPTADGGSICKTTAIFHTKG 124
Query: 133 GVEIKGIDIELVKHKPLGMYEVVEAHLKA 161
+ +I+ + +++ +EA+L A
Sbjct: 125 DAVVPEENIKYANEQNTALFKALEAYLIA 153
>pdb|3RWS|A Chain A, Crystal Structure Of Medicago Truncatula Nodulin 13
(Mtn13) In Complex With Trans-Zeatin
Length = 168
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 16 FVTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
+V+ +S ++++ ++ D + I P+ L I+ E EGDG GTIK++ ++ G+ TK
Sbjct: 15 YVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFV--GDFGSTK 72
Query: 76 HRVDALDKEKFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVE 135
+D +D+E Y EG D LE + E K + GC+ K T +
Sbjct: 73 QHIDMVDRENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEEGCIVKSTTKYYT----- 127
Query: 136 IKGIDIELVK-------HKPLGMYEVVEAHLKAYP 163
KG DIEL K + G + VE+ L A P
Sbjct: 128 -KGDDIELSKDYLEAGIERFEGFTKAVESFLLANP 161
>pdb|2WQL|A Chain A, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|B Chain B, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|C Chain C, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|D Chain D, Crystal Structure Of The Major Carrot Allergen Dau C 1
Length = 154
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 16 FVTQVSPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTK 75
+ VS ++F ++LD + P+ + KS+E +GDG GT++ I EG I
Sbjct: 10 ITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVE-VKGDGGAGTVRIITLPEGSPITTMT 68
Query: 76 HRVDALDKEKFMCKYRFIEGD---GFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKE 132
R DA++KE I+GD GFI+S+ TH + GG + K T F K
Sbjct: 69 VRTDAVNKEALSYDSTVIDGDILLGFIESI---ETHMVVVP-TADGGSITKTTAIFHTKG 124
Query: 133 GVEIKGIDIELVKHKPLGMYEVVEAHLKA 161
+ +I+ + +++ +EA+L A
Sbjct: 125 DAVVPEENIKFADAQNTALFKAIEAYLIA 153
>pdb|2I9Y|A Chain A, Solution Structure Of Arabidopsis Thaliana Protein
At1g70830, A Member Of The Major Latex Protein Family
Length = 166
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 SIKSIEYFEGD-GDVGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEGD 96
+I+ + EGD G VG+I NY+ GE + K R++A++ +K + +R IEGD
Sbjct: 50 NIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGD 103
>pdb|2VNE|A Chain A, The X-Ray Structure Of Norcoclaurine Synthase From
Thalictrum Flavum
pdb|2VNE|B Chain B, The X-Ray Structure Of Norcoclaurine Synthase From
Thalictrum Flavum
pdb|2VQ5|A Chain A, X-Ray Structure Of Norcoclaurine Synthase From Thalictrum
Flavum In Complex With Dopamine And Hydroxybenzaldehyde
pdb|2VQ5|B Chain B, X-Ray Structure Of Norcoclaurine Synthase From Thalictrum
Flavum In Complex With Dopamine And Hydroxybenzaldehyde
Length = 201
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 37 CPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEGD 96
P LL + + +E GDG VGTI ++ G K + +D E + K + IEG
Sbjct: 57 LPDLLPGAFEKLEII-GDGGVGTILDXTFVPGEFPHEYKEKFILVDNEHRLKKVQXIEG- 114
Query: 97 GFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAK 131
G++D + + I G+ CV K + ++ K
Sbjct: 115 GYLDLGVTYYXDTIHVVPTGKDSCVIKSSTEYHVK 149
>pdb|2FLH|A Chain A, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|B Chain B, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|C Chain C, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|D Chain D, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|3C0V|A Chain A, Crystal Structure Of Cytokinin-Specific Binding Protein In
Complex With Cytokinin And Ta6br12
pdb|3C0V|B Chain B, Crystal Structure Of Cytokinin-Specific Binding Protein In
Complex With Cytokinin And Ta6br12
pdb|3C0V|C Chain C, Crystal Structure Of Cytokinin-Specific Binding Protein In
Complex With Cytokinin And Ta6br12
pdb|3C0V|D Chain D, Crystal Structure Of Cytokinin-Specific Binding Protein In
Complex With Cytokinin And Ta6br12
Length = 155
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Query: 25 MFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIRYTKHRVDALDKE 84
++ L D + P++L +K ++ EGDG VGTI N++ Y + + D+
Sbjct: 18 LWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFLPEVSPSYQREEITEFDES 77
Query: 85 KFMCKYRFIEGDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDFKAKEGVEIK 137
+ IEG G++ L + K + + + + +E K
Sbjct: 78 SHEIGLQVIEG-GYLSQGLSYYKTTFKLSEIEEDKTLVNVKISYDHDSDIEEK 129
>pdb|3US7|A Chain A, Crystal Structure Of Phytohormone Binding Protein From
Medicago Truncatula In Complex With Gibberellic Acid
(Ga3)
Length = 156
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 36 ICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEG-GEIRYTKHRVDALDKEKFMCKYRFIE 94
+ P++L + +K ++ EGDG VGT N++ G + Y + + D+ + +E
Sbjct: 29 VVPKVLPNIVKDVQVIEGDGGVGTKLIFNFLPGIAPVNYQREVITEYDELSHTIGLQVVE 88
Query: 95 GDGFIDSMLEFLTHEIKFEGYGQGGCVCKITCDF 128
G G+++ L + +F + + + +
Sbjct: 89 G-GYLNQGLSYYKTTFQFSAISENKTLVNVKISY 121
>pdb|3UJL|A Chain A, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 177
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 15 SFVTQV--SPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIR 72
S +TQ +P+ + LI N P +K GDGDVG+++++ I G
Sbjct: 26 SLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPAS 83
Query: 73 YTKHRVDALDKEKFMCKYRFIEGD------GFIDSMLEFLTHE 109
+ R++ +D + + +R + G+ + S+ EFL +
Sbjct: 84 TSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQD 126
>pdb|3NJ1|A Chain A, X-Ray Crystal Structure Of The Pyl2(V114i)-Pyrabactin A
Complex
Length = 193
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 15 SFVTQV--SPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIR 72
S +TQ +P+ + LI N P +K GDGDVG+++++ I G
Sbjct: 40 SLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPAS 97
Query: 73 YTKHRVDALDKEKFMCKYRFIEGD------GFIDSMLEFLTHE 109
+ R++ +D + + +R + G+ + S+ EFL +
Sbjct: 98 TSTERLEFVDDDHRVLSFRIVGGEHRLKNYKSVTSVNEFLNQD 140
>pdb|3NMP|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMT|A Chain A, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
pdb|3NMV|A Chain A, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
Length = 178
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 15 SFVTQV--SPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIR 72
S +TQ +P+ + LI N P +K GDGDVG+++++ I G
Sbjct: 26 SLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPFS 83
Query: 73 YTKHRVDALDKEKFMCKYRFIEGD------GFIDSMLEFLTHE 109
+ R++ +D + + +R + G+ + S+ EFL +
Sbjct: 84 TSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQD 126
>pdb|3NMH|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
Length = 178
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 15 SFVTQV--SPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIR 72
S +TQ +P+ + LI N P +K GDGDVG+++++ I G
Sbjct: 26 SLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPAS 83
Query: 73 YTKHRVDALDKEKFMCKYRFIEGD------GFIDSMLEFLTHE 109
+ R++ +D + + +R + G+ + S+ EFL +
Sbjct: 84 TSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQD 126
>pdb|3KAZ|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|C Chain C, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KB0|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2
pdb|3KB3|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 176
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 15 SFVTQV--SPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIR 72
S +TQ +P+ + LI N P +K GDGDVG+++++ I G
Sbjct: 25 SLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPAS 82
Query: 73 YTKHRVDALDKEKFMCKYRFIEGD------GFIDSMLEFLTHE 109
+ R++ +D + + +R + G+ + S+ EFL +
Sbjct: 83 TSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQD 125
>pdb|3KDH|A Chain A, Structure Of Ligand-Free Pyl2
pdb|3KDH|B Chain B, Structure Of Ligand-Free Pyl2
pdb|3KDH|C Chain C, Structure Of Ligand-Free Pyl2
pdb|3KDI|A Chain A, Structure Of (+)-Aba Bound Pyl2
pdb|3NR4|A Chain A, Pyrabactin-Bound Pyl2
pdb|3NR4|B Chain B, Pyrabactin-Bound Pyl2
pdb|3NR4|C Chain C, Pyrabactin-Bound Pyl2
pdb|3NS2|A Chain A, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|B Chain B, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|C Chain C, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3KL1|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
pdb|3KL1|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
Length = 190
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 15 SFVTQV--SPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIR 72
S +TQ +P+ + LI N P +K GDGDVG+++++ I G
Sbjct: 37 SLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPAS 94
Query: 73 YTKHRVDALDKEKFMCKYRFIEGD------GFIDSMLEFLTHE 109
+ R++ +D + + +R + G+ + S+ EFL +
Sbjct: 95 TSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQD 137
>pdb|3NJ0|A Chain A, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|B Chain B, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|C Chain C, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
Length = 193
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 15 SFVTQV--SPSRMFKALILDSHNICPRLLFSSIKSIEYFEGDGDVGTIKQINYIEGGEIR 72
S +TQ +P+ + LI N P +K GDGDVG+++++ I G
Sbjct: 40 SLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPAS 97
Query: 73 YTKHRVDALDKEKFMCKYRFIEGD------GFIDSMLEFLTHE 109
+ R++ +D + + +R + G+ + S+ EFL +
Sbjct: 98 TSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQD 140
>pdb|3OQU|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl9
With Aba
pdb|3OQU|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl9
With Aba
Length = 205
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 53 GDGDVGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDSMLEFLT 107
GD ++G+++++N G + R++ LD E+ + + I GD + + LT
Sbjct: 91 GDPEIGSLREVNVKSGLPATTSTERLELLDDEEHILGIKIIGGDHRLKNYSSILT 145
>pdb|1SFJ|A Chain A, 2.4a Crystal Structure Of Staphylococcus Aureus Type I 3-
Dehydroquinase, With 3-Dehydroquinate Bound
pdb|1SFJ|B Chain B, 2.4a Crystal Structure Of Staphylococcus Aureus Type I 3-
Dehydroquinase, With 3-Dehydroquinate Bound
Length = 238
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 57 VGTIKQINYIEGGEIRYTKHRVDALDK-EKFMCKYRFIEGDGFI----------DSMLEF 105
V TI YIE I+ HR+DA+D E + ++ + D DS
Sbjct: 7 VATITPQLYIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLL 66
Query: 106 LTHEIKFE-GYGQ--GGCVCKITCDFKAKEGVEIKGIDIELVKHKPLGMYEVVEAHLKAY 162
+T+ K + GYGQ + D G+++ IDIE + ++ + HL+ Y
Sbjct: 67 VTYRTKLQGGYGQFTNDSYLNLISDLANINGIDM--IDIEWQADIDIEKHQRIITHLQQY 124
>pdb|3CKF|A Chain A, The Crystal Structure Of Ospa Deletion Mutant
Length = 228
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 47 SIEYFEGDGDVGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEG 95
++E F+ DG K++ +G + YT + D K K + K +EG
Sbjct: 76 TLEVFKSDGSTLVSKKVTRADGTRLEYTGIKSDGSGKAKEVLKGYVLEG 124
>pdb|3KLX|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl3
pdb|3KLX|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl3
pdb|4DS8|A Chain A, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 209
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 57 VGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDS 101
VGTI++++ + G + ++ LD+EK + +R + G+ +++
Sbjct: 99 VGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNN 143
>pdb|4DSB|A Chain A, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of I 212121 At 2.70a
pdb|4DSB|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of I 212121 At 2.70a
Length = 186
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 57 VGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDS 101
VGTI++++ + G + ++ LD+EK + +R + G+ +++
Sbjct: 76 VGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNN 120
>pdb|4DSC|A Chain A, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of H32 At 1.95a
pdb|4DSC|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of H32 At 1.95a
Length = 188
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 57 VGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDS 101
VGTI++++ + G + ++ LD+EK + +R + G+ +++
Sbjct: 78 VGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNN 122
>pdb|3OJI|A Chain A, X-Ray Crystal Structure Of The Py13 -Pyrabactin Complex
pdb|3OJI|B Chain B, X-Ray Crystal Structure Of The Py13 -Pyrabactin Complex
Length = 189
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 57 VGTIKQINYIEGGEIRYTKHRVDALDKEKFMCKYRFIEGDGFIDS 101
VGTI++++ + G + ++ LD+EK + +R + G+ +++
Sbjct: 79 VGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNN 123
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,099,232
Number of Sequences: 62578
Number of extensions: 215034
Number of successful extensions: 546
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 480
Number of HSP's gapped (non-prelim): 43
length of query: 167
length of database: 14,973,337
effective HSP length: 92
effective length of query: 75
effective length of database: 9,216,161
effective search space: 691212075
effective search space used: 691212075
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)