RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 031035
(167 letters)
>gnl|CDD|178131 PLN02516, PLN02516, methylenetetrahydrofolate dehydrogenase
(NADP+).
Length = 299
Score = 286 bits (734), Expect = 7e-99
Identities = 131/155 (84%), Positives = 142/155 (91%)
Query: 1 MAAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMK 60
MA+PSD A IIDGKA+A+ IRSEIAEEV LSEK+GKVPGLAVVIVG RKDSQ+YV+MK
Sbjct: 1 MASPSDHVAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMK 60
Query: 61 RKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEI 120
RKACAEVGIKSFD+DLPE +SEAELISKVHELN PDVHGILVQLPLPKHINEEK+L EI
Sbjct: 61 RKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEI 120
Query: 121 SLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKAII 155
SLEKDVDGFHPLNIGKLAMKGR+PLFLPCTPK +
Sbjct: 121 SLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCL 155
>gnl|CDD|236760 PRK10792, PRK10792, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 285
Score = 199 bits (508), Expect = 1e-64
Identities = 82/147 (55%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A IIDGK +AQ +RSE+A++V+ + PGLAVV+VG SQ YV+ KRKAC EVG
Sbjct: 3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVG 62
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
S DLPE SEAEL++ + ELN P + GILVQLPLP HI+ KVL I +KDVDG
Sbjct: 63 FVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDG 122
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
FHP N+G+LA R PL PCTP+ I+
Sbjct: 123 FHPYNVGRLAQ--RIPLLRPCTPRGIM 147
>gnl|CDD|178485 PLN02897, PLN02897, tetrahydrofolate dehydrogenase/cyclohydrolase,
putative.
Length = 345
Score = 199 bits (508), Expect = 4e-64
Identities = 83/151 (54%), Positives = 114/151 (75%)
Query: 5 SDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKAC 64
++QK +IDG +A+ IR++IA EVR + + GKVPGLAVV+VG ++DSQ+YV K KAC
Sbjct: 52 TEQKTVVIDGNVIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKAC 111
Query: 65 AEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEK 124
E GIKS +LPE +E +++S + + N +HGILVQLPLP+H++E K+L + LEK
Sbjct: 112 EETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQHLDESKILNMVRLEK 171
Query: 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKAII 155
DVDGFHPLN+G LAM+GR+PLF+ CTPK +
Sbjct: 172 DVDGFHPLNVGNLAMRGREPLFVSCTPKGCV 202
>gnl|CDD|215332 PLN02616, PLN02616, tetrahydrofolate dehydrogenase/cyclohydrolase,
putative.
Length = 364
Score = 200 bits (509), Expect = 4e-64
Identities = 89/151 (58%), Positives = 113/151 (74%)
Query: 5 SDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKAC 64
S+ A +IDGKAVA+ IR EI EV + E G VPGLAV++VG RKDS +YV K+KAC
Sbjct: 69 SEGGAKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKAC 128
Query: 65 AEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEK 124
VGI SF++ LPE +E E++ + N P VHGILVQLPLP H++E+ +L +S+EK
Sbjct: 129 DSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEK 188
Query: 125 DVDGFHPLNIGKLAMKGRDPLFLPCTPKAII 155
DVDGFHPLNIG+LAM+GR+PLF+PCTPK I
Sbjct: 189 DVDGFHPLNIGRLAMRGREPLFVPCTPKGCI 219
>gnl|CDD|223268 COG0190, FolD, 5,10-methylene-tetrahydrofolate
dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
[Coenzyme metabolism].
Length = 283
Score = 191 bits (487), Expect = 2e-61
Identities = 82/146 (56%), Positives = 103/146 (70%), Gaps = 2/146 (1%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
IIDGKA+A+ IR E+ E+V L K G PGLAV++VG SQ YV K+KA E+GI
Sbjct: 1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGI 60
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
S DLPE ++E EL++ + ELN P+V GILVQLPLPKH++E+K+L I EKDVDGF
Sbjct: 61 ASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGF 120
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HP N+GKLA +P FLPCTP I+
Sbjct: 121 HPYNLGKLA--QGEPGFLPCTPAGIM 144
>gnl|CDD|184560 PRK14190, PRK14190, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 284
Score = 175 bits (445), Expect = 3e-55
Identities = 75/147 (51%), Positives = 100/147 (68%), Gaps = 3/147 (2%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A IIDGK VA+ R ++ EEV L E+ G VPGLAV++VG S SYV K+KA +VG
Sbjct: 3 AVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
I S + P ++E EL++ + LN P ++GILVQLPLPKHI+E+ V+ IS EKDVDG
Sbjct: 62 IYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
FHP+N+G++ + FLPCTP I+
Sbjct: 122 FHPINVGRMMLG--QDTFLPCTPHGIL 146
>gnl|CDD|184558 PRK14188, PRK14188, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 296
Score = 174 bits (443), Expect = 7e-55
Identities = 72/143 (50%), Positives = 91/143 (63%), Gaps = 2/143 (1%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
ATIIDGKA A +R+ +A EV L +G PGLAVV+VG SQ YV K K E G
Sbjct: 2 ATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
+ SF+ LP S+AEL++ + LN P +HGILVQLPLPKH++ E V+ I EKDVDG
Sbjct: 62 MASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTP 151
H +N G+LA + +PCTP
Sbjct: 122 LHVVNAGRLA--TGETALVPCTP 142
>gnl|CDD|184559 PRK14189, PRK14189, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 285
Score = 174 bits (442), Expect = 7e-55
Identities = 73/143 (51%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A +IDG A+++ +R+E A+ L+ + G PGLAV++VG SQ YV K KAC + G
Sbjct: 3 AQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
S P +SEAEL++++ ELN P +HGILVQLPLPKHI+ KV+ I+ EKDVDG
Sbjct: 62 FHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTP 151
FH N G L M G+ PLF PCTP
Sbjct: 122 FHVANAGAL-MTGQ-PLFRPCTP 142
>gnl|CDD|201431 pfam00763, THF_DHG_CYH, Tetrahydrofolate
dehydrogenase/cyclohydrolase, catalytic domain.
Length = 117
Score = 159 bits (406), Expect = 2e-51
Identities = 66/118 (55%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
I+DGKA+A+ I+ E+ EEV L EK G P LAV++VG SQ YV KRKA E+GI
Sbjct: 1 KILDGKALAKKIKEELKEEVAKLKEK-GITPKLAVILVGDDPASQVYVRSKRKAAEELGI 59
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVD 127
+S I LPE ++E EL++ + +LN P VHGILVQLPLPKHI+E K+L I EKDVD
Sbjct: 60 ESELIRLPEDITEEELLALIEKLNADPSVHGILVQLPLPKHIDENKILNAIDPEKDVD 117
>gnl|CDD|237634 PRK14179, PRK14179, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 284
Score = 163 bits (414), Expect = 1e-50
Identities = 76/147 (51%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
IIDGKA+AQ +++E+AE+V L E+ G VPGL V++VG SQ YV K ++ G
Sbjct: 2 TEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
KS + LPE +S+ EL+ + N P HGILVQLPLPKHINEEK+L I +KDVDG
Sbjct: 62 FKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
FHP+N G L GR P+ +PCTP I+
Sbjct: 122 FHPMNTGHL-WSGR-PVMIPCTPAGIM 146
>gnl|CDD|172679 PRK14191, PRK14191, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 285
Score = 161 bits (408), Expect = 1e-49
Identities = 68/146 (46%), Positives = 97/146 (66%), Gaps = 2/146 (1%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
++DGKA++ I ++ ++++L+ + GK P LAV++VG SQ+YV+MK KAC VG+
Sbjct: 2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGM 61
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
S L E +EAEL+S + +LN ++ GILVQLPLP+HI+ + VL I KDVDGF
Sbjct: 62 DSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGF 121
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HPLNIGKL D F+P TP ++
Sbjct: 122 HPLNIGKLC-SQLDG-FVPATPMGVM 145
>gnl|CDD|237637 PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 284
Score = 159 bits (405), Expect = 3e-49
Identities = 71/147 (48%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A I+DGKA A I++++AE V L EK G PGL V+VG SQ+YV K + CAEVG
Sbjct: 3 AIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
I S DLP ++ EL + + ELN P G +VQLPLPKH++E VL I KD DG
Sbjct: 62 ITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
HP N+G+L + P LPCTP+ I+
Sbjct: 122 LHPTNLGRLVLNEPAP--LPCTPRGIV 146
>gnl|CDD|184553 PRK14176, PRK14176, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 287
Score = 159 bits (403), Expect = 5e-49
Identities = 68/153 (44%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Query: 4 PSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKA 63
++ IIDGKA+A+ I +E+ V L G PGLA ++VG S+ YV +K KA
Sbjct: 3 DESYESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKA 62
Query: 64 CAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLE 123
C VGI++ D LP ++ EL+ + LN DVHGIL+QLPLPKH++ ++ + I
Sbjct: 63 CERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPA 122
Query: 124 KDVDGFHPLNIGKLAMKGRDPLFLPCTPKAIIL 156
KD DGFHP N+GKL M G D +PCTP +I
Sbjct: 123 KDADGFHPYNMGKL-MIG-DEGLVPCTPHGVIR 153
>gnl|CDD|172662 PRK14174, PRK14174, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 295
Score = 155 bits (394), Expect = 2e-47
Identities = 72/146 (49%), Positives = 91/146 (62%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
IIDGK V+ +++E+ V K GKVPGL V+IVG SQ YV K K+C E+G+
Sbjct: 2 LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGM 61
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
S I+LP +E L+ K+ +LN PDVHGILVQ PLPK I+E V I KDVDGF
Sbjct: 62 NSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGF 121
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HP N+G+L M D F+ CTP I+
Sbjct: 122 HPENLGRLVMGHLDKCFVSCTPYGIL 147
>gnl|CDD|237635 PRK14184, PRK14184, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 286
Score = 154 bits (392), Expect = 3e-47
Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Query: 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
++DGKA A TIR E+ EV L+ ++G+ PGLAV++VG SQ YV K +AC + GI
Sbjct: 3 LLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIV 62
Query: 71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
S LP ++ EL + ELN PD+ GIL+QLPLPK ++ ++ L I KDVDGFH
Sbjct: 63 SEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFH 122
Query: 131 PLNIGKLAMKGRDPLFLPCTPKAII 155
P N+G+LA+ P F PCTP ++
Sbjct: 123 PENMGRLALG--LPGFRPCTPAGVM 145
>gnl|CDD|184549 PRK14167, PRK14167, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 297
Score = 153 bits (387), Expect = 2e-46
Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 3/146 (2%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
IIDG AVA IR ++ + + L + G PGLA V++ S++YVSMK++ C EVG
Sbjct: 2 TEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVG 60
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
I++ D+++ EL + ELN DVHGILVQ+P+P H+++ +VL I KDVDG
Sbjct: 61 IEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDG 120
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAI 154
FHP N+G+L D F PCTP I
Sbjct: 121 FHPENVGRLV--AGDARFKPCTPHGI 144
>gnl|CDD|184556 PRK14185, PRK14185, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 293
Score = 148 bits (375), Expect = 9e-45
Identities = 71/146 (48%), Positives = 96/146 (65%), Gaps = 2/146 (1%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
+IDGKA++ I+ EIA EV + K GK P LA ++VG S++YV+ K KAC E G
Sbjct: 2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGF 61
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
KS I V+E EL++KV ELN DV G +VQLPLPKHI+E+KV+ I KDVDGF
Sbjct: 62 KSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HP+N+G++++ P F+ TP I+
Sbjct: 122 HPINVGRMSIG--LPCFVSATPNGIL 145
>gnl|CDD|237633 PRK14168, PRK14168, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 297
Score = 147 bits (372), Expect = 3e-44
Identities = 70/146 (47%), Positives = 92/146 (63%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A II G + + I EI EV L EKYGKVPGL ++VG S SYV++K K +G
Sbjct: 3 AKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLG 62
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
+ ++E EL++ + + N +HGILVQLPLPKHINE+KVL I +KDVDG
Sbjct: 63 FHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDG 122
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAI 154
FHP+N+G+L + G + FLPCTP I
Sbjct: 123 FHPVNVGRLMIGGDEVKFLPCTPAGI 148
>gnl|CDD|184555 PRK14183, PRK14183, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 281
Score = 145 bits (368), Expect = 7e-44
Identities = 67/142 (47%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
I+DGKA++ I+ + +EV L VPGLAV++VG S +YV MK KAC VGI
Sbjct: 2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGI 61
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
S ++P +S+ E++ + +N P++ GILVQLPLPKHI+ K+L I +KDVDGF
Sbjct: 62 YSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGF 121
Query: 130 HPLNIGKLAMKGRDPLFLPCTP 151
HP N+G+L + G D F+PCTP
Sbjct: 122 HPYNVGRL-VTGLDG-FVPCTP 141
>gnl|CDD|172658 PRK14170, PRK14170, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 284
Score = 143 bits (361), Expect = 8e-43
Identities = 80/145 (55%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
Query: 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
IIDGK +A+ I+ ++ EV L K GK PGLAVV+VG + S++YV K+K E G+K
Sbjct: 4 IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62
Query: 71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
S I+LPE V+E +L+S V ELN +HGILVQLPLP+HI+EEKV+ IS +KDVDGFH
Sbjct: 63 SVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFH 122
Query: 131 PLNIGKLAMKGRDPLFLPCTPKAII 155
P+N+G L + G+D F+PCTP II
Sbjct: 123 PVNVGNLFI-GKDS-FVPCTPAGII 145
>gnl|CDD|237636 PRK14186, PRK14186, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 297
Score = 142 bits (361), Expect = 2e-42
Identities = 67/147 (45%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A I+DGKA+A I + ++ K G+ PGLAV+ VG S YV K KACA VG
Sbjct: 2 ALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
I SF LP S+AE+ + + +LN V GIL+QLPLPKH++E +L I +KD DG
Sbjct: 62 IASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
HPLN+G+L +KG +P CTP ++
Sbjct: 122 LHPLNLGRL-VKG-EPGLRSCTPAGVM 146
>gnl|CDD|172675 PRK14187, PRK14187, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 294
Score = 138 bits (348), Expect = 1e-40
Identities = 61/144 (42%), Positives = 86/144 (59%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
IIDGK +A I +A + L ++ P L V++VG SQ YV K++ +G
Sbjct: 2 TNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
++S I LP +SE+ LI K++ELN VHGILVQLP+P HI++ ++ I EKDVDG
Sbjct: 62 LRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPK 152
FH N+G+L + +PCTPK
Sbjct: 122 FHNENVGRLFTGQKKNCLIPCTPK 145
>gnl|CDD|172666 PRK14178, PRK14178, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 279
Score = 137 bits (347), Expect = 1e-40
Identities = 69/146 (47%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
I+DGKAV++ + EE+ + G P LA VIVG SQ YV MK +AC VGI
Sbjct: 1 MILDGKAVSEKRLELLKEEI----IESGLYPRLATVIVGDDPASQMYVRMKHRACERVGI 56
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
S I+LP + ++ ++ LN PD++GILVQLPLPK ++ E+V+ I EKDVDGF
Sbjct: 57 GSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGF 116
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HPLN+G+L + G P F PCTP I+
Sbjct: 117 HPLNLGRL-VSGL-PGFAPCTPNGIM 140
>gnl|CDD|184561 PRK14192, PRK14192, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 283
Score = 137 bits (346), Expect = 2e-40
Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A ++DGKA+A+ I E++ V L K G+ P LA ++VG S +YV MK AC VG
Sbjct: 3 ALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVG 62
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
+ S ++LP++ + +L++K+ ELN PDVHGIL+Q P+P I+E ISL KDVDG
Sbjct: 63 MDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDG 122
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
L G++AM + + TP I+
Sbjct: 123 VTCLGFGRMAMG--EAAYGSATPAGIM 147
>gnl|CDD|172670 PRK14182, PRK14182, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 282
Score = 135 bits (340), Expect = 1e-39
Identities = 71/145 (48%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Query: 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
+IDGK +A ++ E+A EVR L+ + G GL VV VG S YV KRK C EVGI
Sbjct: 3 LIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGIT 61
Query: 71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
S + LP ++AEL++ + LN P VHGILVQLPLPKH++E VL IS KD DGFH
Sbjct: 62 SVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFH 121
Query: 131 PLNIGKLAMKGRDPLFLPCTPKAII 155
P N+G L++ G + PCTP ++
Sbjct: 122 PFNVGALSI-GIAGVPRPCTPAGVM 145
>gnl|CDD|172682 PRK14194, PRK14194, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 301
Score = 133 bits (336), Expect = 7e-39
Identities = 73/158 (46%), Positives = 96/158 (60%), Gaps = 4/158 (2%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A +IDGKA A + +++ E+VR L G P LAV++VG SQ YV K E G
Sbjct: 4 AKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAG 62
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
I+S + LP S+A L++ + ELN P V+GIL+QLPLP HI+E +VL I+ KDVDG
Sbjct: 63 IRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDG 122
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAIILYSCLINCGNL 166
FH N+G L+ +GRD L PCTP L CG+L
Sbjct: 123 FHSENVGGLS-QGRDVL-TPCTPSG-CLRLLEDTCGDL 157
>gnl|CDD|172660 PRK14172, PRK14172, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 278
Score = 129 bits (327), Expect = 1e-37
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
II+GK VA I+ EI V E +P +A ++VG S Y++ + K +GI
Sbjct: 4 IINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGID 63
Query: 71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
I L E +SE +LI+++ ELN +VHGI++QLPLPKH++E+K+ +I KD+D
Sbjct: 64 FKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLT 123
Query: 131 PLNIGKLAMKGRDPLFLPCTPKAII 155
+++GK + FLPCTP ++I
Sbjct: 124 FISVGKFYKG--EKCFLPCTPNSVI 146
>gnl|CDD|172668 PRK14180, PRK14180, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 282
Score = 130 bits (327), Expect = 1e-37
Identities = 65/146 (44%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
+IDGK++++ ++ +A +V+ P L +IVG S++YV+ K KACA+VGI
Sbjct: 2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGI 61
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
S I LPE +E+EL+ + +LN VH ILVQLPLP HIN+ V+ I EKDVDGF
Sbjct: 62 DSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGF 121
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HP N+G+L ++ + L CTPK I+
Sbjct: 122 HPTNVGRLQLRDKKCL-ESCTPKGIM 146
>gnl|CDD|184552 PRK14175, PRK14175, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 286
Score = 129 bits (325), Expect = 2e-37
Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 3/147 (2%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A I+DGK +A+ R + ++V L EK G P L+V++VG SQSYV K+KA ++G
Sbjct: 3 AKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIG 61
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
+ S + L E +E E++++++ LN V GILVQ+PLPK ++E+K+L I+ EKDVDG
Sbjct: 62 MISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDG 121
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
FHP+NIGKL + + F+PCTP I+
Sbjct: 122 FHPINIGKLYID--EQTFVPCTPLGIM 146
>gnl|CDD|172654 PRK14166, PRK14166, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 282
Score = 124 bits (312), Expect = 2e-35
Identities = 68/146 (46%), Positives = 94/146 (64%), Gaps = 2/146 (1%)
Query: 10 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGI 69
T++DGKA++ I+ E+ E+ + L K G LAV++VG SQ+YV K KAC E GI
Sbjct: 2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGI 60
Query: 70 KSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGF 129
KS L E ++ EL++ ++ LN VHGILVQLPLP HI ++ +L I KDVDGF
Sbjct: 61 KSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGF 120
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HP+N+G L + G + FLPCTP ++
Sbjct: 121 HPINVGYLNL-GLESGFLPCTPLGVM 145
>gnl|CDD|172665 PRK14177, PRK14177, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 284
Score = 123 bits (310), Expect = 4e-35
Identities = 63/146 (43%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
Query: 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
++DGK +++ IR+EI E + K ++P LA ++VG S++YVSMK KAC +VG+
Sbjct: 5 LLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMG 64
Query: 71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
S I L EQ + EL+ + +LN+ P+V GIL+Q P+P I+E I+LEKDVDG
Sbjct: 65 SEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVT 124
Query: 131 PLNIGKLAMKGRDPLFLPCTPKAIIL 156
L+ GKL+M +LPCTP ++L
Sbjct: 125 TLSFGKLSMGVE--TYLPCTPYGMVL 148
>gnl|CDD|172669 PRK14181, PRK14181, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 287
Score = 120 bits (302), Expect = 7e-34
Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Query: 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
++ G A+ I + I E + S PGLAVV++G S+ YV MK K ++G+
Sbjct: 2 LLKGAPAAEHILATIKENISASS----TAPGLAVVLIGNDPASEVYVGMKVKKATDLGMV 57
Query: 71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
S LP + ++++ +H LN P++HGILVQLPLPKH++ + +L IS +KDVDG H
Sbjct: 58 SKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLH 117
Query: 131 PLNIGKLAMKGRDPLFLPCTPKAII 155
P+N+GKL + G F+PCTP II
Sbjct: 118 PVNMGKLLL-GETDGFIPCTPAGII 141
>gnl|CDD|184550 PRK14169, PRK14169, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 282
Score = 118 bits (298), Expect = 2e-33
Identities = 59/147 (40%), Positives = 95/147 (64%), Gaps = 3/147 (2%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
AT +DG+AV++ I +++ + V L+++ P LAVV+VG S+ YV K++ ++G
Sbjct: 1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIG 59
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
++S LPE ++A+L++KV ELN PDV ILVQLPLP ++E+ V+ I +KDVDG
Sbjct: 60 VRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDG 119
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
F P+++G+L +P + TP I+
Sbjct: 120 FSPVSVGRLWAN--EPTVVASTPYGIM 144
>gnl|CDD|184551 PRK14173, PRK14173, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 287
Score = 118 bits (298), Expect = 2e-33
Identities = 61/147 (41%), Positives = 85/147 (57%), Gaps = 6/147 (4%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVG 68
A + G A+ + +E+ + L VP L VV +G S SYV +K + +G
Sbjct: 3 ARELSGPPAAEAVYAELRARLAKLPF----VPHLRVVRLGEDPASVSYVRLKDRQAKALG 58
Query: 69 IKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDG 128
++S LPE S+ EL+ + LN P+V GILVQLPLP HI+ ++VL I KDVDG
Sbjct: 59 LRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDG 118
Query: 129 FHPLNIGKLAMKGRDPLFLPCTPKAII 155
FHPLN+G+L M G + L PCTP ++
Sbjct: 119 FHPLNVGRLWM-GGEALE-PCTPAGVV 143
>gnl|CDD|172659 PRK14171, PRK14171, bifunctional 5,10-methylene-tetrahydrofolate
dehydrogenase/ 5,10-methylene-tetrahydrofolate
cyclohydrolase; Provisional.
Length = 288
Score = 117 bits (294), Expect = 1e-32
Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
Query: 11 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIK 70
IIDGKA+A I +++ E++ L + P LA+V+VG S YV K K ++GI
Sbjct: 4 IIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGID 63
Query: 71 SFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFH 130
+ ++L + +LISK++ELN+ ++ GI+VQLPLP I++ K+L +S KD+DGFH
Sbjct: 64 TLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFH 123
Query: 131 PLNIGKLAMKGRDPLFLPCT 150
PLN+G L G F+PCT
Sbjct: 124 PLNVGYL-HSGISQGFIPCT 142
>gnl|CDD|133448 cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding domain of
methylene-tetrahydrofolate dehydrogenase/cyclohydrolase.
NADP binding domain of the Methylene-Tetrahydrofolate
Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase)
bifunctional enzyme. Tetrahydrofolate is a versatile
carrier of activated one-carbon units. The major
one-carbon folate donors are N-5 methyltetrahydrofolate,
N5,N10-m-THF, and N10-formayltetrahydrofolate. The
oxidation of metabolic intermediate m-THF to m-THF
requires the enzyme m-THF DH. In addition, most DHs also
have an associated cyclohydrolase activity which
catalyzes its hydrolysis to N10-formyltetrahydrofolate.
m-THF DH is typically found as part of a multifunctional
protein in eukaryotes. NADP-dependent m-THF DH in
mammals, birds and yeast are components of a
trifunctional enzyme with DH, cyclohydrolase, and
synthetase activities. Certain eukaryotic cells also
contain homodimeric bifunctional DH/cyclodrolase form.
In bacteria, monofucntional DH, as well as bifunctional
m-THF m-THF DHm-THF DHDH/cyclodrolase are found. In
addition, yeast (S. cerevisiae) also express an
monofunctional DH. This family contains the bifunctional
DH/cyclohydrolase. M-THF DH, like other amino acid
DH-like NAD(P)-binding domains, is a member of the
Rossmann fold superfamily which includes glutamate,
leucine, and phenylalanine DHs, m-THF DH,
methylene-tetrahydromethanopterin DH, m-THF
DH/cyclohydrolase, Shikimate DH-like proteins, malate
oxidoreductases, and glutamyl tRNA reductase. Amino acid
DHs catalyze the deamination of amino acids to keto
acids with NAD(P)+ as a cofactor. The NAD(P)-binding
Rossmann fold superfamily includes a wide variety of
protein families including NAD(P)- binding domains of
alcohol DHs, tyrosine-dependent oxidoreductases,
glyceraldehyde-3-phosphate DH, lactate/malate DHs,
formate/glycerate DHs, siroheme synthases,
6-phosphogluconate DH, amino acid DHs, repressor rex,
NAD-binding potassium channel domain, CoA-binding, and
ornithine cyclodeaminase-like domains.
Length = 168
Score = 55.3 bits (134), Expect = 4e-10
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 123 EKDVDGFHPLNIGKLAMKGRDPLFLPCTPKAII 155
EKDVDG HP+N+G+LA+ P F+PCTP I+
Sbjct: 2 EKDVDGLHPVNLGRLALG--RPGFIPCTPAGIL 32
>gnl|CDD|217267 pfam02882, THF_DHG_CYH_C, Tetrahydrofolate
dehydrogenase/cyclohydrolase, NAD(P)-binding domain.
Length = 160
Score = 40.1 bits (95), Expect = 1e-04
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
Query: 130 HPLNIGKLAMKGRDPLFLPCTPKAII 155
HP+N+G+L + +P F+PCTP+ I+
Sbjct: 1 HPINLGRLVL--GEPGFVPCTPRGIM 24
>gnl|CDD|133447 cd01079, NAD_bind_m-THF_DH, NAD binding domain of
methylene-tetrahydrofolate dehydrogenase. The
NAD-binding domain of methylene-tetrahydrofolate
dehydrogenase (m-THF DH). M-THF is a versatile carrier
of activated one-carbon units. The major one-carbon
folate donors are N-5 methyltetrahydrofolate,
N5,N10-m-THF, and N10-formayltetrahydrofolate. The
oxidation of metabolic intermediate m-THF to m-THF
requires the enzyme m-THF DH. M-THF DH is a component of
an unusual monofunctional enzyme; in eukaryotes, m-THF
DH is typically found as part of a multifunctional
protein. NADP-dependent m-THF DHs in mammals, birds and
yeast are components of a trifunctional enzyme with DH,
cyclohydrolase, and synthetase activities. Certain
eukaryotic cells also contain homodimeric bifunctional
DH/cyclodrolase form. In bacteria, monofunctional DH, as
well as bifunctional DH/cyclodrolase are found. In
addition, yeast (S. cerevisiae) also express an
monofunctional DH. This family contains only the
monofunctional DHs from S. cerevisiae and certain
bacteria. M-THF DH, like other amino acid DH-like
NAD(P)-binding domains, is a member of the Rossmann fold
superfamily which includes glutamate, leucine, and
phenylalanine DHs, m-THF DH,
methylene-tetrahydromethanopterin DH, m-THF
DH/cyclohydrolase, Shikimate DH-like proteins, malate
oxidoreductases, and glutamyl tRNA reductase. Amino acid
DHs catalyze the deamination of amino acids to keto
acids with NAD(P)+ as a cofactor. The NAD(P)-binding
Rossmann fold superfamily includes a wide variety of
protein families including NAD(P)- binding domains of
alcohol DHs, tyrosine-dependent oxidoreductases,
glyceraldehyde-3-phosphate DH, lactate/malate DHs,
formate/glycerate DHs, siroheme synthases,
6-phosphogluconate DH, amino acid DHs, repressor rex,
NAD-binding potassium channel domain, CoA-binding, and
ornithine cyclodeaminase-like domains. These domains
have an alpha-beta-alpha configuration. NAD binding
involves numerous hydrogen and van der Waals contacts.
Length = 197
Score = 28.9 bits (65), Expect = 0.89
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 122 LEKDVDGFHPLNIGKLAMKGR--DP-----LFLPCTPKAII-------LYSCLINCGN 165
KDV+G I L R DP LPCTP AI+ +Y+ ++ GN
Sbjct: 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGN 58
>gnl|CDD|236894 PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase;
Provisional.
Length = 384
Score = 29.1 bits (66), Expect = 0.94
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 16 AVAQTIRSEIAEEVRLLSEKYGKVPGLAV-VIVGGR 50
A Q ++ + + L E+ +PG+AV VI G+
Sbjct: 26 ATPQQLKDIVDRTITPLMEEQD-IPGMAVAVIYNGK 60
>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional.
Length = 409
Score = 28.9 bits (65), Expect = 1.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 15 KAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVS 58
+ +A IR +E L+ E+ GK+ LA V V D Y++
Sbjct: 2 RKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMA 45
>gnl|CDD|216708 pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed
for efficient transposition of the insertion sequence or
transposon DNA. This family includes transposases for
IS200 from E. coli.
Length = 120
Score = 27.9 bits (63), Expect = 1.5
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 3/24 (12%)
Query: 88 KVHELNVMPD-VHGILVQLPLPKH 110
++ E+N MPD VH +LV LP PK
Sbjct: 41 EILEINGMPDHVH-LLVSLP-PKL 62
>gnl|CDD|234446 TIGR04043, rSAM_MSMEG_0568, radical SAM protein, MSMEG_0568
family. Members of this protein family are radical SAM
proteins related to MSMEG_0568 from Mycobacterium
smegmatis. Members occur within 8-gene operons in
species as diverse as M. smegmatis, Rhizobium
leguminosarum, Synechococcus elongatus, and Sorangium
cellulosum. The function of the operon is unknown, but
similarity of MSMEG_0568 to some cofactor biosynthesis
radical SAM proteins suggests a similar biosynthetic
function [Unknown function, Enzymes of unknown
specificity].
Length = 354
Score = 28.1 bits (63), Expect = 2.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 2 AAPSDQKATIIDGKAVAQTIRSEIAEE 28
A PSD KA IDG V + + A++
Sbjct: 24 AGPSDHKAVTIDGLTVMVPVYTAAAQD 50
>gnl|CDD|233854 TIGR02409, carnitine_bodg, gamma-butyrobetaine hydroxylase.
Members of this protein family are gamma-butyrobetaine
hydroxylase, both bacterial and eukarytotic. This enzyme
catalyzes the last step in the conversion of lysine to
carnitine. Carnitine can serve as a compatible solvent
in bacteria and also participates in fatty acid
metabolism.
Length = 366
Score = 28.2 bits (63), Expect = 2.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 9 ATIIDGKAVAQTIRSEIAEEVRLLSE 34
+ +DG AVA+ +R E E R+LS
Sbjct: 217 SEFVDGFAVAEALRKENPEAFRILSS 242
>gnl|CDD|216816 pfam01968, Hydantoinase_A, Hydantoinase/oxoprolinase. This family
includes the enzymes hydantoinase and oxoprolinase
EC:3.5.2.9. Both reactions involve the hydrolysis of
5-membered rings via hydrolysis of their internal imide
bonds.
Length = 285
Score = 27.6 bits (62), Expect = 3.4
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 15 KAVAQTIRSEIAEEVRLLSEKYGKVP-GLAVVIVGG 49
+ + + +A+ VRLLS + G P +V+ GG
Sbjct: 209 EGILRIANETMADAVRLLSVERGLDPRDFPLVVFGG 244
>gnl|CDD|233883 TIGR02475, CobW, cobalamin biosynthesis protein CobW. The family
of proteins identified by this model is generally found
proximal to the trimeric cobaltochelatase subunit CobN
which is essential for vitamin B12 (cobalamin)
biosynthesis. The protein contains an P-loop
nucleotide-binding loop in the N-terminal domain and a
histidine-rich region in the C-terminal portion
suggesting a role in metal binding, possibly as an
intermediary between the cobalt transport and chelation
systems. A broader CobW family is delineated by two PFAM
models which identify the N- and C-terminal domains
(pfam02492 and pfam07683) [Biosynthesis of cofactors,
prosthetic groups, and carriers, Heme, porphyrin, and
cobalamin].
Length = 341
Score = 27.4 bits (61), Expect = 3.5
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
Query: 8 KATIIDGKAVAQT---IRSEIAEEVRLLSEKYGKVP-----GLAVVI---VGGRKDSQSY 56
KA ++D +A+ I +E+ V+++ +G+V GL + R +
Sbjct: 182 KADLLDAAGLARVRAEIAAELPRAVKIVEASHGEVDARVLLGLGAAAEDDLDNRPSHHDF 241
Query: 57 VSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDV 98
+ E S +DL E A L ++ L DV
Sbjct: 242 EGGEEHDHDE--FDSVVVDLGEVADPAALRQRLERLAEEHDV 281
>gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function
unknown].
Length = 652
Score = 27.7 bits (62), Expect = 3.7
Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 5/86 (5%)
Query: 8 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEV 67
KA +I G +A+ + EE EK G I K + + E
Sbjct: 381 KALVIRGYPLAEALSKVKEEE--RPREKEGTEEEERREITVYEKRIKKLEETVERLEEE- 437
Query: 68 GIKSFDIDLPEQVSEAE-LISKVHEL 92
+L E E E L S++
Sbjct: 438 -NSELKRELEELKREIEKLESELERF 462
>gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit;
Provisional.
Length = 471
Score = 27.2 bits (61), Expect = 4.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 53 SQSYVSMKRKACAEVGIKSFDIDLPEQ 79
V R+ CA+ GI+ FD+D P Q
Sbjct: 81 GALQVDYLRENCADFGIRLFDVDDPRQ 107
>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde
dehydrogenase AldA-like. Lactaldehyde dehydrogenase
from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an
NAD(+)-dependent enzyme involved in the metabolism of
L-fucose and L-rhamnose, and other similar sequences
are present in this CD.
Length = 468
Score = 27.2 bits (61), Expect = 4.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 4 PSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIV 47
P+ ++A + + +A IR E +L+ E+ GK LA V V
Sbjct: 55 PAIERAAYL--RKLADLIRENADELAKLIVEEQGKTLSLARVEV 96
>gnl|CDD|173919 cd02168, NMNAT_Nudix, Nicotinamide/nicotinate mononucleotide
adenylyltransferase of bifunctional proteins, also
containing a Nudix hydrolase domain. N-terminal NMNAT
(Nicotinamide/nicotinate mononucleotide
adenylyltransferase) domain of a novel bifunctional
enzyme endowed with NMN adenylyltransferase and Nudix
hydrolase activities. This domain is highly homologous
to the archeal NMN adenyltransferase that catalyzes NAD
synthesis from NMN and ATP. NMNAT is an essential
enzyme in the biosynthesis of NAD(+) and NADP(+).
Nicotinamide-nucleotide adenylyltransferase synthesizes
NAD via the salvage pathway, while nicotinate-nucleotide
adenylyltransferase synthesizes the immediate precursor
of NAD via the de novo pathway. The C-terminal domain
of this enzyme shares homology with the archaeal
ADP-ribose pyrophosphatase, a member of the 'Nudix'
hydrolase family.
Length = 181
Score = 25.8 bits (57), Expect = 9.6
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 26 AEEVRLLSEKYGKVPGLAVVIVGGRKDSQSY 56
EV+ + +V +VG RKD+ SY
Sbjct: 85 LAEVQQQVLEIAG-GSASVGLVGHRKDASSY 114
>gnl|CDD|205692 pfam13514, AAA_27, AAA domain. This domain is found in a number of
double-strand DNA break proteins. This domain contains a
P-loop motif.
Length = 1118
Score = 26.3 bits (58), Expect = 9.9
Identities = 20/120 (16%), Positives = 36/120 (30%), Gaps = 20/120 (16%)
Query: 7 QKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAE 66
+K + A+ E E++ + + +P + V + R
Sbjct: 354 RKEALDQALKSARDALEERERELKQVRAQLAALPTVTVP----EPLRAALADALR----- 404
Query: 67 VGIKSFDIDLPEQVSEAELISK-------VHELNVMPDVHGILVQLPLPKHINEEKVLGE 119
+ DID E E+ + L + LV LP+P + L E
Sbjct: 405 ----AGDIDAALAALEQEVAVAKRELAQALSRLGLWRGDLEELVALPVPSAEQVQAFLKE 460
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.138 0.391
Gapped
Lambda K H
0.267 0.0659 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 8,442,685
Number of extensions: 789981
Number of successful extensions: 922
Number of sequences better than 10.0: 1
Number of HSP's gapped: 890
Number of HSP's successfully gapped: 56
Length of query: 167
Length of database: 10,937,602
Length adjustment: 90
Effective length of query: 77
Effective length of database: 6,945,742
Effective search space: 534822134
Effective search space used: 534822134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.1 bits)