BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031038
(167 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 94 KDRFTSAPSASG-------IPRYAYKDIQKATQNFTN--ILGQGAFGPVYKATMPSGGVA 144
+D F P+ + R++ +++Q A+ NF+N ILG+G FG VYK + G +
Sbjct: 6 QDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV 65
Query: 145 AIKVLASDSHQ-GEKEFQTEV 164
A+K L + Q GE +FQTEV
Sbjct: 66 AVKRLKEERXQGGELQFQTEV 86
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 106 IPRYAYKDIQKATQNFTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQ-GEKEFQT 162
+ R++ +++Q A+ NF N ILG+G FG VYK + G + A+K L + Q GE +FQT
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 163 EV 164
EV
Sbjct: 77 EV 78
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 102 SASGIPRYAYK----DIQKATQNFTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQ 155
S+ +P +Y+ D+++AT NF + ++G G FG VYK + G A+K +S Q
Sbjct: 18 SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77
Query: 156 G 156
G
Sbjct: 78 G 78
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 106 IPRYAYK----DIQKATQNFTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQG 156
+P +Y+ D+++AT NF + ++G G FG VYK + G A+K +S QG
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG 78
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
LG GAFG VYKA +G +AA KV+ + S + +++ E+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE 68
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
LG GAFG VYKA +G +AA KV+ + S + +++ E+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE 60
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.7 bits (73), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.7 bits (73), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 19 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 66
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.7 bits (73), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.7 bits (73), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 26 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 73
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.7 bits (73), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.7 bits (73), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 37 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 84
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.7 bits (73), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 77
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.7 bits (73), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 31 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 78
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 77
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 69
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 23 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 70
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 99
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 99
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 46 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 93
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 101
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 56 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 103
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 144
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEV 164
LG GAFG VYKA V AA KV+ + S + +++ E+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEV 164
LG GAFG VYKA V AA KV+ + S + +++ E+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEV 164
LG GAFG VYKA V AA KV+ + S + +++ E+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 29.6 bits (65), Expect = 0.73, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 249 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 307
Query: 158 KEFQ 161
Q
Sbjct: 308 AFLQ 311
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 166 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 158 KEFQ 161
Q
Sbjct: 225 AFLQ 228
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 166 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 158 KEFQ 161
Q
Sbjct: 225 AFLQ 228
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 166 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 158 KEFQ 161
Q
Sbjct: 225 AFLQ 228
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVL 149
TS P G+ + A+ +I + + LGQG FG V+ T AIK L
Sbjct: 167 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 217
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N +G+G FG VYK + + VA K+ A + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 158 KEFQTEVR 165
++F E++
Sbjct: 75 QQFDQEIK 82
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N +G+G FG VYK + + VA K+ A + + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 158 KEFQTEVR 165
++F E++
Sbjct: 69 QQFDQEIK 76
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N +G+G FG VYK + + VA K+ A + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 158 KEFQTEVR 165
++F E++
Sbjct: 75 QQFDQEIK 82
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKE 159
F LG GAFG V +AT G A+K+L S +H EKE
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKE 159
F LG GAFG V +AT G A+K+L S +H EKE
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKE 159
F LG GAFG V +AT G A+K+L S +H EKE
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 86
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKE 159
F LG GAFG V +AT G A+K+L S +H EKE
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 12/61 (19%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKA--TMPSGGVAAIKVLASDSHQ 155
++APSA+ I RY + I K LG+G +G VYKA T+ + VA ++ +
Sbjct: 25 SAAPSATSIDRY--RRITK--------LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE 74
Query: 156 G 156
G
Sbjct: 75 G 75
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGV---AAIKVL----ASDS 153
P + P + DI+ F +++G+G FG V KA + G+ AAIK + + D
Sbjct: 11 PDPTIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 65
Query: 154 HQ---GEKEFQTEVRAH 167
H+ GE E ++ H
Sbjct: 66 HRDFAGELEVLCKLGHH 82
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGV---AAIKVL----ASDS 153
P + P + DI+ F +++G+G FG V KA + G+ AAIK + + D
Sbjct: 14 PDPTIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 68
Query: 154 HQ---GEKEFQTEVRAH 167
H+ GE E ++ H
Sbjct: 69 HRDFAGELEVLCKLGHH 85
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGV---AAIKVL----ASDS 153
P + P + DI+ F +++G+G FG V KA + G+ AAIK + + D
Sbjct: 4 PDPTIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 58
Query: 154 HQ---GEKEFQTEVRAH 167
H+ GE E ++ H
Sbjct: 59 HRDFAGELEVLCKLGHH 75
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKE 159
F LG GAFG V +AT G A+K+L S +H EKE
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKE 159
F LG GAFG V +AT G A+K+L S +H EKE
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 79
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + +E Q
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ 65
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + +E Q
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ 65
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ 161
Q+ + T ++G G+FG VY+A + SG + AIK + +E Q
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ 65
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGG----VAAIKVLASD-SHQGEKE 159
P A I K T+ +LG GAFG VYK +P G AIKVL + S + KE
Sbjct: 6 PNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE 65
Query: 160 FQTE 163
E
Sbjct: 66 ILDE 69
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 120 NFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEV 164
++G G +G VYK + +G +AAIKV+ + E+E + E+
Sbjct: 27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEI 71
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 121 FTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQ 161
+TN ++G G+FG V++A + AIK + D +E Q
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ 84
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 120 NFTNILGQGAFGPVYKATM-PSGGVAAIKVLASD 152
F +LG+G+FG V A + +G + A+KVL D
Sbjct: 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKD 59
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 120 NFTNILGQGAFGPVY---KATMP-SGGVAAIKVL 149
+LGQG+FG V+ K T P SG + A+KVL
Sbjct: 31 ELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL 64
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEK--EFQTEV 164
DI N +G G+FG V++A G A+K+L E+ EF EV
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREV 85
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEK--EFQTEV 164
DI N +G G+FG V++A G A+K+L E+ EF EV
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREV 85
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N G+G FG VYK + + VA K+ A + + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 158 KEFQTEVR 165
++F E++
Sbjct: 66 QQFDQEIK 73
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGG-----VAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA +++ + S + KE
Sbjct: 38 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE 97
Query: 160 FQTE 163
E
Sbjct: 98 ILDE 101
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSH 154
+SG ++ + + Q + G+G +G VYKA G + A+K + D+
Sbjct: 8 SSGRENLYFQGLMEKYQKLEKV-GEGTYGVVYKAKDSQGRIVALKRIRLDAE 58
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 100 APSASGIPRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGGVAAIKV 148
PS + P A I K T+ +LG GAFG VYK +P G I V
Sbjct: 21 TPSGTA-PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPV 70
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSH 154
+SG ++ + + Q + G+G +G VYKA G + A+K + D+
Sbjct: 8 SSGRENLYFQGLMEKYQKLEKV-GEGTYGVVYKAKDSQGRIVALKRIRLDAE 58
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG 156
+GQG FG V+KA G VA KVL + +G
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG 58
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG 156
+GQG FG V+KA G VA KVL + +G
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG 59
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG 156
+GQG FG V+KA G VA KVL + +G
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG 59
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 116 KATQNFTNILGQGAFGPVYKAT---MPSGGVA---AIKVLASDSHQGEKE 159
+ F +LG GAFG V AT + GV+ A+K+L + E+E
Sbjct: 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE 93
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG 156
+GQG FG V+KA G VA KVL + +G
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG 59
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 111 YKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
YK+I+ ++G+GAFG V KA + V AIK + S+S + K F E+R
Sbjct: 7 YKEIE-----VEEVVGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELR 53
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 111 YKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVR 165
YK+I+ ++G+GAFG V KA + V AIK + S+S + K F E+R
Sbjct: 8 YKEIE-----VEEVVGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELR 54
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGGVAAIKV 148
P A I K T+ +LG GAFG VYK +P G I V
Sbjct: 4 PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPV 47
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 122 TNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEV 164
T ILG G FG V+K + G+ A K++ + + ++E + E+
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE 159
+F LG GAFG V +AT + A+K+L +H E+E
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 71
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE 159
+F LG GAFG V +AT + A+K+L +H E+E
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 89
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE 159
+F LG GAFG V +AT + A+K+L +H E+E
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 87
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 120 NFTNILGQGAFGPVYKAT-MPSGGVAAIK 147
++LG+GA+G V AT P+G + AIK
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIK 42
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIK 147
++LG+GA+G V AT P+G + AIK
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIK 42
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIK 147
++LG+GA+G V AT P+G + AIK
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIK 42
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE 159
+F LG GAFG V +AT + A+K+L +H E+E
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 94
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE 159
+F LG GAFG V +AT + A+K+L +H E+E
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE 94
>pdb|4FPV|A Chain A, Crystal Structure Of D. Rerio Tdp2 Complexed With Single
Strand Dna Product
pdb|4FPV|B Chain B, Crystal Structure Of D. Rerio Tdp2 Complexed With Single
Strand Dna Product
Length = 257
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 19 GILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRI 55
+LIA + F G + Y H C N+ T +R+
Sbjct: 104 NLLIAQVTFSGQKLYLMTSHLESCKNQSQERTKQLRV 140
>pdb|1CIV|A Chain A, Chloroplast Nadp-Dependent Malate Dehydrogenase From
Flaveria Bidentis
Length = 385
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 72 VAVKASGFPQKKSQVSWWSNHSKDRFTSAPSAS--GIP-RYAYKDIQKATQNFTNIL 125
+A+KA F K S V+ W NHS + +A GIP +D + FTN++
Sbjct: 205 LALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIHGIPVTEVIRDRKWLEDEFTNMV 261
>pdb|4F1H|B Chain B, Crystal Structure Of Tdp2 From Danio Rerio Complexed With
A Single Strand Dna
Length = 251
Score = 26.6 bits (57), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 19 GILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRI 55
+LIA + F G + Y H C N+ T +R+
Sbjct: 98 NLLIAQVTFSGQKLYLMTSHLESCKNQSQERTKQLRV 134
>pdb|4F1H|A Chain A, Crystal Structure Of Tdp2 From Danio Rerio Complexed With
A Single Strand Dna
Length = 250
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 19 GILIATLVFFGLRWYKKHDHFRRCSNERSVATHPIRI 55
+LIA + F G + Y H C N+ T +R+
Sbjct: 97 NLLIAQVTFSGQKLYLMTSHLESCKNQSQERTKQLRV 133
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGGVAAIKV 148
P A I K T+ +LG GAFG VYK +P G I V
Sbjct: 10 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 53
>pdb|2B0T|A Chain A, Structure Of Monomeric Nadp Isocitrate Dehydrogenase
pdb|3MBC|A Chain A, Crystal Structure Of Monomeric Isocitrate Dehydrogenase
From Corynebacterium Glutamicum In Complex With Nadp
pdb|3MBC|B Chain B, Crystal Structure Of Monomeric Isocitrate Dehydrogenase
From Corynebacterium Glutamicum In Complex With Nadp
Length = 738
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 68 VANSVAVKASGFPQKKSQVSWWSNHSKDRFTSA----PSASGIPRYAYKDIQKATQNFTN 123
V + V V AS ++ W+ +++ T A S +G+ + +D +K
Sbjct: 339 VPSDVIVDASMPAMIRTSGHMWNKDDQEQDTLAIIPDSSYAGVYQTVIEDCRK------- 391
Query: 124 ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTE 163
GAF P T+P+ G+ A K SH +K F+ E
Sbjct: 392 ---NGAFDPTTMGTVPNVGLMAQKAEEYGSH--DKTFRIE 426
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,856,539
Number of Sequences: 62578
Number of extensions: 183820
Number of successful extensions: 749
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 84
length of query: 167
length of database: 14,973,337
effective HSP length: 92
effective length of query: 75
effective length of database: 9,216,161
effective search space: 691212075
effective search space used: 691212075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)