BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031040
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WPX7|BAG2_ARATH BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana
GN=BAG2 PE=2 SV=1
Length = 285
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 40 GINSSHEIKWELRPGGMLVQKR-ESGCEGEGSITIRVSTVSKWHDISIKATSTFGELKMI 98
G +S + + ELRPGGM+VQKR + I +RV S H+ISI + STFGELK I
Sbjct: 7 GTTTSGDGEMELRPGGMVVQKRTDHSSSVPRGIRVRVKYGSVHHEISINSQSTFGELKKI 66
Query: 99 LSMVSGLEPREQRLLFKGKEREDNEFLHMVGVRDKDKVLLLEDPAIKDMKLHGLR 153
LS +G+ ++ ++++K KER+ FL + GV+D+ K++L+EDP ++ +L LR
Sbjct: 67 LSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELR 121
>sp|Q9LYP4|BAG3_ARATH BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana
GN=BAG3 PE=1 SV=1
Length = 303
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Query: 38 CGGINSSHEIKWELRPGGMLVQKR-ESGCEGEGSITIRVSTVSKWHDISIKATSTFGELK 96
GG S +E WE RPGGM+VQ+R + + +RV S +H+I+I + S+FGELK
Sbjct: 13 IGGGTSGNE--WESRPGGMVVQRRTDQNSDVPRVFRVRVKYGSVYHEININSQSSFGELK 70
Query: 97 MILSMVSGLEPREQRLLFKGKEREDNEFLHMVGVRDKDKVLLLEDPAIKDMKLHGLRGGQ 156
+LS GL + ++L+K KER+ FL + GV+D+ K+++ EDP ++ +L R
Sbjct: 71 KMLSDQVGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLVVKEDPISQEKRLLAKRKNA 130
Query: 157 PIGTAYRTIS 166
I A ++IS
Sbjct: 131 AIEKASKSIS 140
>sp|Q8RX71|BAG4_ARATH BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana
GN=BAG4 PE=1 SV=1
Length = 269
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 16/116 (13%)
Query: 42 NSSHEIKWELRPGGMLVQKRESGCEGE---------------GSITIRVSTVSKWHDISI 86
NS+ E +WE+RPGGMLVQ+R+ + +I I VS S HD+ I
Sbjct: 4 NSTEESEWEVRPGGMLVQRRDDAASSDHKPLQDPDSASAAFAQTIRITVSHGSSHHDLHI 63
Query: 87 KATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVGVRDKDK-VLLLED 141
A +TFG++K L +GLE E ++LF+G ER+D E L GV+D K V+++ED
Sbjct: 64 SAHATFGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVED 119
>sp|Q0WUQ1|BAG1_ARATH BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana
GN=BAG1 PE=1 SV=1
Length = 342
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 50 ELRPGGMLVQKRESGCEGEGS-----ITIRVSTVSKWHDISIKATSTFGELKMILSMVSG 104
E+RPGGMLVQKR + G I +R+ + +H+I+I ++FGELK +L+ +G
Sbjct: 41 EIRPGGMLVQKRNPDLDPVGPPPPPMIRVRIKYGAVYHEINISPQASFGELKKMLTGPTG 100
Query: 105 LEPREQRLLFKGKEREDNEFLHMVGVRDKDKVLLLEDPAIKDMKLHGLRGGQPIGTAYRT 164
+ ++Q+L++K KER+ FL + GV+DK K++L+EDP ++ + +R A +
Sbjct: 101 IHHQDQKLMYKDKERDSKAFLDVSGVKDKSKMVLIEDPLSQEKRFLEMRKIAKTEKASKA 160
Query: 165 IS 166
IS
Sbjct: 161 IS 162
>sp|Q39256|UBQ8_ARATH Polyubiquitin 8 OS=Arabidopsis thaliana GN=UBQ8 PE=3 SV=1
Length = 631
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + +K++ T +K + G+ PR+QRL+F GK+ ED L
Sbjct: 77 GGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTL 134
Score = 34.3 bits (77), Expect = 0.37, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 69 GSITIRVSTVSKWH------DISIKATSTFGELKMILSMVSGLEPREQRLLFKGKE--RE 120
G + I VST S + + ++++ T +K + GL P QRL+F G+E E
Sbjct: 153 GGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTE 212
Query: 121 DNEFLHMVGVRDKDKVLL 138
DN L G+R++ + L
Sbjct: 213 DNRTLADYGIRNRSTLCL 230
>sp|Q78JW9|UBFD1_MOUSE Ubiquitin domain-containing protein UBFD1 OS=Mus musculus GN=Ubfd1
PE=1 SV=2
Length = 368
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 82 HDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
HD+ + ST ELK + ++GL P Q++++KG ED
Sbjct: 156 HDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPED 195
>sp|P0C032|RUB3_ORYSJ Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sativa
subsp. japonica GN=RUB3 PE=3 SV=2
Length = 154
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLH 126
G + ++V T++ K DI I+ T T +K + G+ P +QRL++ GK+ D++ H
Sbjct: 75 GGLNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAH 133
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1
SV=2
Length = 782
Score = 34.3 bits (77), Expect = 0.35, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 71 ITIRVSTVSKWHDI-SIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVG 129
I +R + H + S+ + EL+ + V +EP+ QRL ++GK+ ED L
Sbjct: 3 IQVRTMDGKETHTVNSLSRLTKVQELRKKIEEVFHVEPQLQRLFYRGKQMEDGHTLFDYD 62
Query: 130 VRDKDKVLLL 139
VR D + LL
Sbjct: 63 VRLNDTIQLL 72
>sp|O14562|UBFD1_HUMAN Ubiquitin domain-containing protein UBFD1 OS=Homo sapiens GN=UBFD1
PE=1 SV=2
Length = 309
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 82 HDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
HD+ ST ELK + ++GL P Q++++KG ED
Sbjct: 97 HDVKFPLDSTGSELKQKIHSITGLPPAMQKVMYKGLVPED 136
>sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1
Length = 776
Score = 33.9 bits (76), Expect = 0.51, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 68 EGSITIRVSTVSKWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNE--FL 125
+G T RV ++SK + EL++ ++ + +EP QRL ++GK+ ED F
Sbjct: 9 DGKETHRVDSLSKLTKVD--------ELRVKIAELFNVEPERQRLFYRGKQMEDGHTIFD 60
Query: 126 HMVGVRDKDKVLL 138
+ VG+ D ++L+
Sbjct: 61 YNVGLNDIVQLLV 73
>sp|Q10169|DSK2_SCHPO Deubiquitination-protection protein dph1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dph1 PE=4 SV=1
Length = 354
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 70 SITIRVSTVSKWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVG 129
S+TI+ + K+ +++ + S+ LK ++ V+ +E QRL++ G+ +D E L
Sbjct: 5 SLTIKAANDQKYA-VTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 130 VRDKDKVLLL 139
++D + L+
Sbjct: 64 IQDGHSIHLV 73
>sp|Q54L35|NED82_DICDI NEDD8-like protein 2 OS=Dictyostelium discoideum GN=nedd8l2 PE=3
SV=1
Length = 80
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 70 SITIRVSTVSKWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVG 129
+I ++ + K +++ T +K + ++ G+ P+EQ+L+F GK +D L G
Sbjct: 2 NINLQFHSTGKRTELNFDETDKIELIKNSIRIMEGINPQEQKLIFDGKVLKDTSTLKSCG 61
Query: 130 VRD 132
++D
Sbjct: 62 IKD 64
>sp|Q9H347|UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens GN=UBQLN3 PE=1 SV=2
Length = 655
Score = 33.1 bits (74), Expect = 0.76, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 71 ITIRVSTVSKWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVGV 130
I + V T D S+ T T +LK +S P + L+F GK +D + L GV
Sbjct: 22 IKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQCGV 81
Query: 131 RD 132
RD
Sbjct: 82 RD 83
>sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1
PE=2 SV=2
Length = 774
Score = 33.1 bits (74), Expect = 0.77, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 71 ITIRVSTVSKWHDI-SIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVG 129
I +R + H + S+ + EL+ + + +EP+ QRL ++GK+ ED L
Sbjct: 3 IQVRTMDGKETHTVNSLSRLTKVQELRKKIEELFHVEPQLQRLFYRGKQMEDGHTLFDYD 62
Query: 130 VRDKDKVLLL 139
VR D + LL
Sbjct: 63 VRLNDTIQLL 72
>sp|Q3E7K8|UBQ12_ARATH Polyubiquitin 12 OS=Arabidopsis thaliana GN=UBQ12 PE=3 SV=1
Length = 230
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T LK + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHED 204
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 84 ISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVGVRDKDKVLLL 139
+ ++++ T +K + + G+ P + RL+F GK+ ED L V++ + LL
Sbjct: 15 LEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLL 70
>sp|P0C031|RUB2_ORYSJ Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica
GN=RUB2 PE=2 SV=2
Length = 153
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDN 122
G I+V T++ K +I I+ T T +K + G+ P +QRL++ GK+ D+
Sbjct: 75 GGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD 129
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0C030|RUB1_ORYSJ Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica
GN=RUB1 PE=2 SV=2
Length = 153
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDN 122
G I+V T++ K +I I+ T T +K + G+ P +QRL++ GK+ D+
Sbjct: 75 GGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD 129
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|Q8RUC6|RUB2_ARATH Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2
PE=1 SV=3
Length = 154
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDN 122
G I+V T++ K +I I+ T T +K + G+ P +QRL++ GK+ D+
Sbjct: 75 GGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD 129
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|Q9SHE7|RUB1_ARATH Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1
PE=1 SV=3
Length = 156
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDN 122
G I+V T++ K +I I+ T T +K + G+ P +QRL++ GK+ D+
Sbjct: 75 GGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADD 129
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
Length = 381
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0C073|RUB1_DESAN Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1
PE=2 SV=2
Length = 153
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDN 122
G I+V T++ K +I I+ T T +K + G+ P +QRL++ GK+ D+
Sbjct: 75 GGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADD 129
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|Q8C5U9|UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2 SV=1
Length = 658
Score = 32.3 bits (72), Expect = 1.6, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 50 ELRPGGMLVQKRESGCEGEGSITIRVSTVSKWHDISIKATSTFGELKMILSMVSGLEPRE 109
E P G L ++S I + V T D S+ T T +LK +S P +
Sbjct: 6 EALPQGSLAPAQDSQL-----IRVTVKTPKDKEDFSVVDTCTIRQLKEKISHRFKAHPNQ 60
Query: 110 QRLLFKGKEREDNEFLHMVGVRD 132
L+F GK +D + L GVRD
Sbjct: 61 LVLIFAGKILKDPDSLAQCGVRD 83
>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
Length = 838
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 69 GSITIRVST-VSKWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T + K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 379 GGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 436
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 75 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 151 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 227 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 284
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 303 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 360
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 455 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 512
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 531 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 588
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 607 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 664
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 683 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 740
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 759 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 816
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 84 ISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
+ ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 15 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P59669|UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium PE=2 SV=2
Length = 457
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 379 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|Q9VJ33|NEDD8_DROME NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1
Length = 84
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDN 122
I+V T++ K +I I+ T +K + G+ P++QRL+F GK+ D+
Sbjct: 3 IKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDD 53
>sp|P0DJ25|RL40_TETTS Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena thermophila
(strain SB210) GN=RPL40 PE=1 SV=1
Length = 129
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 71 ITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
+ I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P33190|RL40_TETPY Ubiquitin-60S ribosomal protein L40 OS=Tetrahymena pyriformis
GN=TUF11 PE=3 SV=2
Length = 129
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 71 ITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
+ I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 94 ELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVGVRDKDKVLLL 139
EL+ + + +EP QRL ++GK+ ED L VR D + LL
Sbjct: 27 ELRKKIQELFHVEPGLQRLFYRGKQMEDGHTLFDYDVRLNDTIQLL 72
>sp|P49632|RL40_CAEEL Ubiquitin-60S ribosomal protein L40 OS=Caenorhabditis elegans
GN=ubq-2 PE=3 SV=2
Length = 128
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 71 ITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
+ I V T++ K + ++A+ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
Length = 305
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG84|UBI4P_NICSY Polyubiquitin (Fragment) OS=Nicotiana sylvestris GN=UBI4 PE=2 SV=1
Length = 377
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 71 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 124
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 147 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 200
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 223 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 276
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 299 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 352
Score = 29.6 bits (65), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 84 ISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
+ ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 11 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 48
>sp|P0CH33|UBQ11_ARATH Polyubiquitin 11 OS=Arabidopsis thaliana GN=UBQ11 PE=1 SV=1
Length = 229
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum PE=2 SV=2
Length = 457
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTITGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 379 GGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 432
>sp|P0CG83|UBIQP_HORVU Polyubiquitin (Fragment) OS=Hordeum vulgare PE=2 SV=1
Length = 171
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 17 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 70
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 93 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 146
>sp|P0CH32|UBQ4_ARATH Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1
Length = 382
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|Q3E7T8|UBQ14_ARATH Polyubiquitin 14 OS=Arabidopsis thaliana GN=UBQ14 PE=1 SV=2
Length = 305
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P69325|UBIQP_SOYBN Polyubiquitin OS=Glycine max GN=SUBI-1 PE=2 SV=2
Length = 305
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|Q58G87|UBQ3_ORYSJ Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2
Length = 381
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
>sp|P69309|UBIQP_AVEFA Polyubiquitin OS=Avena fatua PE=2 SV=2
Length = 305
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P69315|UBIQP_LINUS Polyubiquitin (Fragment) OS=Linum usitatissimum PE=3 SV=2
Length = 305
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 116 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 169
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 192 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 245
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I + T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 40 GGMQIFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 93
>sp|P69322|UBIQP_PEA Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2
Length = 381
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CH05|UBI2P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-2 PE=3 SV=1
Length = 458
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 379 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CH04|UBI1P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=2 SV=1
Length = 458
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 379 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|Q1EC66|UBQ3_ARATH Polyubiquitin 3 OS=Arabidopsis thaliana GN=UBQ3 PE=1 SV=1
Length = 306
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|Q8H159|UBQ10_ARATH Polyubiquitin 10 OS=Arabidopsis thaliana GN=UBQ10 PE=1 SV=2
Length = 457
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 379 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG85|UBI1P_NICSY Polyubiquitin OS=Nicotiana sylvestris GN=UBI11 PE=2 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 75 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 151 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 227 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 303 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 356
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 69 GSITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
G + I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 379 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 432
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKERED 121
I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|O65381|RUB3_ARATH NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1
Length = 78
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 73 IRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDN 122
I+V T++ K DI I+ T T +K + G+ P QR+++ GK+ D+
Sbjct: 3 IKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADD 53
>sp|Q8L7L8|TRP1_ARATH Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1
PE=1 SV=2
Length = 578
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 84 ISIKATSTFGELK-MILSMVSGLEPREQR--LLFKGKE-REDNEFLHMVGVRDKDKVLLL 139
I I T+T G LK M++ VS L R L+ +GK+ R+DN+ LH G+ + L
Sbjct: 307 IEIPETATVGSLKRMVMEAVSTLLSDGHRVGLMVQGKKVRDDNKTLHQTGISQDNSHLDS 366
Query: 140 EDPAIK-DMKLHGLRGGQPIGTA 161
D +++ ++ L P+G A
Sbjct: 367 LDFSLEPSSEMPQLLTSHPLGHA 389
>sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1
SV=1
Length = 793
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 71 ITIRVSTVSKWHDI-SIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFLHMVG 129
I +R + H + S+ + EL+ + + +EP QRL ++GK+ ED L
Sbjct: 3 IQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFDYE 62
Query: 130 VRDKDKVLLL 139
VR D + LL
Sbjct: 63 VRLNDTIQLL 72
>sp|P62981|RS27A_SOLTU Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3
PE=2 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 71 ITIRVSTVS-KWHDISIKATSTFGELKMILSMVSGLEPREQRLLFKGKEREDNEFL 125
+ I V T++ K + ++++ T +K + G+ P +QRL+F GK+ ED L
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,446,230
Number of Sequences: 539616
Number of extensions: 2604925
Number of successful extensions: 11939
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 11469
Number of HSP's gapped (non-prelim): 498
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)