BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031042
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q53YF3|SPC3B_ARATH Signal peptidase complex subunit 3B OS=Arabidopsis thaliana
GN=At5g27430 PE=2 SV=1
Length = 167
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/167 (85%), Positives = 151/167 (90%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MHSFGYRANALLTFAVTILA +C I S SDN + +PSAQI+ILNINWFQKQPHGNDEVS
Sbjct: 1 MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60
Query: 61 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 120
LTLNITADLQSLFTWNTKQ+F FVAAEYET KNALNQVSLWDAIIP KE AKF I SNK
Sbjct: 61 LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120
Query: 121 YRFIDQGHSLRGKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDYR 167
YRFIDQGH+LRGK+FNLTLHWHVMPKTGKMFA+KIVMSGYRLP YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167
>sp|Q9MA96|SPC3A_ARATH Signal peptidase complex subunit 3A OS=Arabidopsis thaliana
GN=At3g05230 PE=2 SV=1
Length = 167
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 148/167 (88%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MH+FGYRANALLTFAVT LA +C I S SD + +PSA+I+ILNIN F+KQ HGNDEVS
Sbjct: 1 MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60
Query: 61 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 120
LTL+I+ADLQSLFTWNTKQ+F+FVAAEYETPKN+LNQVSLWDAIIPAKE AKF I SNK
Sbjct: 61 LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120
Query: 121 YRFIDQGHSLRGKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDYR 167
YRFIDQG +LRGK+FNLTLHWHVMPKTGKMFA+KIV+ GY LP+ YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167
>sp|Q9LGB4|SPCS3_ORYSJ Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp.
japonica GN=Os01g0131800 PE=3 SV=2
Length = 147
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 89/166 (53%), Gaps = 21/166 (12%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MHS+ R T A +L C S D + PS AQ + IN F KQ +GND+V
Sbjct: 1 MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGNDKV- 59
Query: 61 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 120
F+F+ AEYE KN+LNQVSLWD IIP K+ A + +K
Sbjct: 60 --------------------FVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSK 99
Query: 121 YRFIDQGHSLRGKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDY 166
Y IDQG SLRGK+ L LHWHVMPK G M +++ +S + LP+ Y
Sbjct: 100 YPLIDQGSSLRGKKVQLVLHWHVMPKAGVMIRDRMALSEFNLPDSY 145
>sp|P28687|SPCS3_CHICK Signal peptidase complex subunit 3 OS=Gallus gallus GN=SPC22 PE=1
SV=1
Length = 180
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPSA--QIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + P A ++ + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAK-FS 114
+D +T +ITADLQS+F WN KQLF++++AEY T NALNQV LWD II + + F
Sbjct: 61 SDLAFVTFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIILRGDNPRLFL 120
Query: 115 IHTSNKYRFIDQGHSLRG-KEFNLTLHWHVMPKTG 148
+KY F D G+ L+G + LTL W+V+P G
Sbjct: 121 KDMKSKYFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155
>sp|P61009|SPCS3_HUMAN Signal peptidase complex subunit 3 OS=Homo sapiens GN=SPCS3 PE=1
SV=1
Length = 180
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 116 H-TSNKYRFIDQGHSLRG-KEFNLTLHWHVMPKTG 148
KY F D G+ L+G + LTL W+V+P G
Sbjct: 121 KDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155
>sp|P61008|SPCS3_CANFA Signal peptidase complex subunit 3 OS=Canis familiaris GN=SPCS3
PE=1 SV=1
Length = 180
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 116 H-TSNKYRFIDQGHSLRG-KEFNLTLHWHVMPKTG 148
KY F D G+ L+G + LTL W+V+P G
Sbjct: 121 KDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155
>sp|Q3SZU5|SPCS3_BOVIN Signal peptidase complex subunit 3 OS=Bos taurus GN=SPCS3 PE=2 SV=1
Length = 180
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 116 H-TSNKYRFIDQGHSLRG-KEFNLTLHWHVMPKTG 148
KY F D G+ L+G + LTL W+V+P G
Sbjct: 121 KDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155
>sp|Q9D365|SPCS3_MOUSE Signal peptidase complex subunit 3 OS=Mus musculus GN=Spcs3 PE=2
SV=1
Length = 180
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 1 MHSFGYRANALLTFAVTILA---LMCTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M+S RAN+L F ++++A L C + + + + P ++I + + F
Sbjct: 1 MNSLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKK 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +I+ADL+ F WN KQLF++++AEY T NA+NQV LWD I+ E K ++
Sbjct: 61 SDLGFITFHISADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWDKILLRGENPKLNL 120
Query: 116 H-TSNKYRFIDQGHSLRG-KEFNLTLHWHVMPKTG 148
+KY F D GH L+G + LTL W V+P G
Sbjct: 121 KDVKSKYFFFDDGHGLKGNRNVTLTLSWQVIPIAG 155
>sp|Q568Z4|SPCS3_RAT Signal peptidase complex subunit 3 OS=Rattus norvegicus GN=Spcs3
PE=2 SV=1
Length = 180
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 1 MHSFGYRANALLTFAVTILA---LMCTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F ++++A L C + + + + P ++I + + F
Sbjct: 1 MNTLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKK 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +I+ADL+ F WN KQLF++++AEY T NA+NQV LWD I+ E K ++
Sbjct: 61 SDLGFITFHISADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWDKILLRGENPKLNL 120
Query: 116 H-TSNKYRFIDQGHSLRG-KEFNLTLHWHVMPKTG 148
+KY F D GH L+G + LTL W V+P G
Sbjct: 121 KDVKSKYFFFDDGHGLKGNRNVTLTLSWQVIPIAG 155
>sp|Q60MW2|SPCS3_CAEBR Probable signal peptidase complex subunit 3 OS=Caenorhabditis
briggsae GN=CBG22979 PE=3 SV=1
Length = 180
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDE-- 58
MH+ RAN+LL F + ++A + LS + S +E+ +I + + D+
Sbjct: 1 MHNLLSRANSLLAFTLWVMAAVTAACFLSTVFLDYTVSNHLEVNDIKIRNVRDYATDDKQ 60
Query: 59 ---VSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFS 114
+L N+ D LF WN KQLF+++ AEY++ +NA+NQV +WD I+ A+
Sbjct: 61 ADLATLAFNLKVDFSRLFNWNVKQLFVYLVAEYKSAENAVNQVVIWDRIVERAERVVMDE 120
Query: 115 IHTSNKYRFIDQG-HSLRGKEFNLTLHWHVMPKTGKM 150
I KY F+D G H L+ L ++V+P G +
Sbjct: 121 IGVKTKYYFLDDGAHLLKHDNVTFVLRYNVIPNAGYL 157
>sp|B0G180|SPCS3_DICDI Signal peptidase complex subunit 3 OS=Dictyostelium discoideum
GN=spcs3 PE=3 SV=1
Length = 170
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MHS RAN ++ F +L + + LS + I++ I+ F Q N E S
Sbjct: 1 MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQ--RNFEYS 58
Query: 61 -LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSN 119
+++++ A+L+ LF WNTK LF++V AEY T +N L+QV +WD I+ K A +
Sbjct: 59 FISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLS 118
Query: 120 KYRFIDQGHSLRGKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDY 166
KY I+QG L+ LT +++V+P +G + +++ S ++ P Y
Sbjct: 119 KYPIINQGLGLKNNTIKLTFNYNVVPISGILTRHQVGTSEFKFPTTY 165
>sp|Q9VCA9|SPCS3_DROME Signal peptidase complex subunit 3 OS=Drosophila melanogaster
GN=Spase22-23 PE=2 SV=1
Length = 179
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 12/176 (6%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPSAQIEIL--NINWFQKQPHG 55
MH+ R NA + + +++LA + C + ++ + T + + +L N+ +
Sbjct: 1 MHTVLTRGNATVAYTLSVLACLTFSCFLSTVFLDYRTDANINTVRVLVKNVPDYGASREK 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T ++ +L +F WN KQLF+++ AEY+TP N LNQV LWD II + A
Sbjct: 61 HDLGFVTFDLQTNLTGIFNWNVKQLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLDF 120
Query: 116 HTSN-KYRFIDQGHSLR-GKEFNLTLHWHVMPKTGKMFANKIVMSG---YRLPEDY 166
N KY F D G+ L+ + +L L W+++P G + + +G ++ P DY
Sbjct: 121 KNMNTKYYFWDDGNGLKDNRNVSLYLSWNIIPNAGLL--PSVQATGKHLFKFPADY 174
>sp|P34525|SPCS3_CAEEL Probable signal peptidase complex subunit 3 OS=Caenorhabditis
elegans GN=K12H4.4 PE=1 SV=1
Length = 180
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPSA--QIEILNINWFQKQPHG 55
MH+ RANALL F + ++A + C + ++ + P+ +++ N+ +
Sbjct: 1 MHNLLSRANALLAFTLWVMAAVTAACFLSTVFLDYTVPTKLTVNDVKVRNVVDYATDEQQ 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFS 114
D +L N+ D +F WN KQLF+++ AEY++ N +NQV LWD I+ A
Sbjct: 61 ADLATLNFNLKVDFSKIFNWNVKQLFVYLVAEYKSKVNEVNQVVLWDRIVERADRVVMDE 120
Query: 115 IHTSNKYRFIDQGHSLRG-KEFNLTLHWHVMPKTGKM 150
I +KY F+D G +L K L ++V+P +G +
Sbjct: 121 IGVKSKYYFLDDGTNLLNHKNVTFVLRYNVIPNSGYL 157
>sp|Q6C4R5|SPC3_YARLI Microsomal signal peptidase subunit 3 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SPC3 PE=3 SV=1
Length = 185
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 55 GNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNAL-NQVSLWDAIIPAKEFAKF 113
G + V+L ++ ADL LF WNTK +F ++ A Y+ ++ + N++++WD II K+ +
Sbjct: 70 GKENVALKFDLDADLSPLFNWNTKLVFAYLTATYDGKRDDIVNEITIWDQIITDKDDSHI 129
Query: 114 SIHTSN-KYRFIDQGHSLRGKEFNLTLHWHVMPKTG 148
+ +N KY D S R + + LHW++ P G
Sbjct: 130 KLKGANSKYSLYDVEESFRNRNATVKLHWNIQPHVG 165
>sp|Q6CRY8|SCP3_KLULA Microsomal signal peptidase subunit 3 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SPC3 PE=3 SV=1
Length = 189
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 58 EVS-LTLNITADLQSLFTWNTKQLFIFVAAEYETPKN--ALNQVSLWDAIIPAKEFAKFS 114
EVS + N D LF WNTKQ+F +V AEYE +N +N++++WD IIP+++ A F+
Sbjct: 70 EVSKIRFNADFDFSRLFNWNTKQVFAYVTAEYEGDENPHTMNEITIWDKIIPSRDNATFT 129
Query: 115 IHTSN-KYRFIDQGHSLRGKEFNLTLHWHVMPKTG 148
+ + KY+ D + + LHW++ P G
Sbjct: 130 LSDIDAKYQLWDLESKITERPLTFKLHWNIQPWFG 164
>sp|Q6BPD6|SPC3_DEBHA Microsomal signal peptidase subunit 3 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=SPC3 PE=3 SV=2
Length = 190
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 4 FGYRANALLTFAVTILALMCTIGSL----SDN---LNTPSPS---AQIEI---LNINWFQ 50
F Y AN LT ++ I+A + + SL S+N L T S S Q+ + N
Sbjct: 8 FQYAANQALTSSI-IIAGIVIVSSLLQLYSNNAWSLGTTSISNIKPQVSLKHSFNYGSVN 66
Query: 51 KQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKN-ALNQVSLWDAIIPAKE 109
++P N + L DL LF WNTKQLF+++ AEY + + N+++ WD II +KE
Sbjct: 67 RKPKENSRIQFDLE--TDLSPLFNWNTKQLFVYLTAEYPGKSDGSSNKITYWDKIITSKE 124
Query: 110 FAKFSI-HTSNKYRFIDQGHSLRGKEFNLTLHWHVMPKTGKM 150
A S+ + +KY D S R ++ + L W++ P G +
Sbjct: 125 DAVLSLKNQKSKYSVWDIEPSFRQRDAVVKLEWNLQPHIGPL 166
>sp|Q12133|SPC3_YEAST Signal peptidase complex subunit SPC3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC3 PE=1 SV=1
Length = 184
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 51 KQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEF 110
++ + + + ++ DL LF WNTKQ+F+++ AEY + + ++V+ WD II +K+
Sbjct: 64 QRGKAKENMKIKFDLNTDLTPLFNWNTKQVFVYLTAEYNSTEKITSEVTFWDKIIKSKDD 123
Query: 111 AKFSIHT-SNKYRFID-QGHSLRGKEFNLTLHWHVMPKTG 148
A ++ +KY D + GK+ LHW+V P G
Sbjct: 124 AVIDVNDLRSKYSIWDIEDGKFEGKDLVFKLHWNVQPWVG 163
>sp|Q10259|SPC3_SCHPO Probable microsomal signal peptidase subunit 3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=spc3 PE=3 SV=1
Length = 185
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Query: 3 SFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS-L 61
+F + + +L F ++ I L+TP + + ++ + + + +
Sbjct: 12 TFFSKLSTVLFFLCAVITFQGVIQRREVELDTPVYVHYAKYRSARFYHAFRNVRQQYAQV 71
Query: 62 TLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKE----FAKFSIHT 117
N+ ADL L+ WNTK + +++ A Y T K+ NQV +WD I+ + E F K ++
Sbjct: 72 KFNMDADLSELWDWNTKHVVVYLVASYSTEKHEKNQVVVWDKILSSPEESKMFMKDTLSN 131
Query: 118 SNKYRFIDQGHSLRGKEFNLTLHWHVMPKTG 148
+ F + + GK TLHW V PK G
Sbjct: 132 IQAHPFNEYSNQFEGKNATYTLHWTVSPKMG 162
>sp|Q8Y565|HEMH_LISMO Ferrochelatase OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=hemH PE=3 SV=1
Length = 309
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 103 AIIPAKEFAKFSIHTSNKYRFIDQGHSLRGKEFNLTLHWHVMPKTGKMFANKIVMSGYRL 162
+I+ A ++ FS+ NK R + L G N W+ PK +M+A++I + ++
Sbjct: 109 SIVLAPHYSSFSVEAYNK-RAKEAADKLGGPRINAINDWYKQPKFIQMWADRINETAKQI 167
Query: 163 PED 165
P D
Sbjct: 168 PAD 170
>sp|Q865X3|IL13_LAMGL Interleukin-13 OS=Lama glama GN=IL13 PE=2 SV=1
Length = 136
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 18 ILALMCTIGSLSDNLNTPSPSAQIEIL----NINWFQKQPHGNDEVSLTLNITADL 69
++A C IG L+ + TPSP A E++ NI QK P N + ++N+T +
Sbjct: 8 VIAFTC-IGGLASPVPTPSPKALKELIEELVNITQNQKAPLCNGSMVWSINLTTSM 62
>sp|Q865W5|IL13_CAMBA Interleukin-13 OS=Camelus bactrianus GN=IL13 PE=2 SV=1
Length = 136
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 18 ILALMCTIGSLSDNLNTPSPSAQIEIL----NINWFQKQPHGNDEVSLTLNITADL 69
++A C IG L+ + TPSP A E++ NI QK P N + ++N+T +
Sbjct: 8 VIAFTC-IGGLASPVPTPSPKALKELIEELVNITQNQKAPLCNGSMVWSINLTTSM 62
>sp|Q71XF4|HEMH_LISMF Ferrochelatase OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=hemH PE=3 SV=1
Length = 309
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 103 AIIPAKEFAKFSIHTSNKYRFIDQGHSLRGKEFNLTLHWHVMPKTGKMFANKIVMSGYRL 162
+I+ A ++ FS+ NK R D L G W+ PK +M+A++I + ++
Sbjct: 109 SIVLAPHYSSFSVEAYNK-RAKDAADKLGGLRIKAINDWYKQPKFIQMWADRINETAKQI 167
Query: 163 PED 165
P D
Sbjct: 168 PAD 170
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,525,170
Number of Sequences: 539616
Number of extensions: 2228385
Number of successful extensions: 4497
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4457
Number of HSP's gapped (non-prelim): 27
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)