Query 031042
Match_columns 167
No_of_seqs 113 out of 228
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 13:08:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031042.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031042hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2iuba2 f.17.3.1 (A:286-349) M 11.4 1.4E+02 0.01 16.8 4.0 27 7-33 1-27 (64)
2 d1rmka_ g.3.6.1 (A:) Conotoxin 10.5 14 0.001 18.9 -1.2 13 140-152 7-19 (31)
3 d3ci0k3 d.24.1.6 (K:29-93,K:27 8.3 40 0.0029 22.0 0.2 21 57-78 53-73 (106)
4 d1jv2a2 b.1.15.1 (A:599-737) T 7.8 87 0.0063 20.5 1.9 29 121-149 80-109 (139)
5 d1xhoa_ d.79.1.2 (A:) Chorisma 7.3 1.4E+02 0.0099 19.6 2.7 20 54-73 36-55 (112)
6 d2gqpa1 d.122.1.1 (A:74-337) H 6.6 3.2E+02 0.023 19.4 4.8 43 96-140 134-179 (227)
7 d1osya_ b.1.21.1 (A:) Fungal i 6.5 1.6E+02 0.012 18.7 2.6 9 74-82 87-95 (114)
8 d1xo8a_ b.1.25.1 (A:) Putative 6.4 1.3E+02 0.0096 20.1 2.3 34 131-164 110-146 (151)
9 d1dbfa_ d.79.1.2 (A:) Chorisma 6.2 1.7E+02 0.012 19.6 2.7 20 54-73 38-57 (127)
10 d1l0qa2 b.69.2.3 (A:1-301) Sur 6.1 1.3E+02 0.0096 19.9 2.2 16 81-102 3-18 (301)
No 1
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}
Probab=11.36 E-value=1.4e+02 Score=16.82 Aligned_cols=27 Identities=7% Similarity=0.219 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccC
Q 031042 7 RANALLTFAVTILALMCTIGSLSDNLN 33 (167)
Q Consensus 7 R~n~v~~~~~~~l~~l~~~~~lss~~~ 33 (167)
|-|.+.-..+.+.++.+-+.++++.+.
T Consensus 1 r~N~~mk~lT~it~iflP~t~i~gifG 27 (64)
T d2iuba2 1 KTNEVMKVLTIIATIFMPLTFIAGIYG 27 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 667777777677777777778888774
No 2
>d1rmka_ g.3.6.1 (A:) Conotoxin {Marble cone (Conus marmoreus), mrVIb [TaxId: 42752]}
Probab=10.46 E-value=14 Score=18.89 Aligned_cols=13 Identities=15% Similarity=0.580 Sum_probs=10.0
Q ss_pred EEEEEeeeeEeee
Q 031042 140 HWHVMPKTGKMFA 152 (167)
Q Consensus 140 ~wnv~P~vG~l~~ 152 (167)
+|+++|++|++.-
T Consensus 7 eycivpi~gfiyc 19 (31)
T d1rmka_ 7 EYCIVPILGFVYC 19 (31)
T ss_dssp SCCCCCTTCCCEE
T ss_pred eEEEeeeeeeeee
Confidence 4788999998753
No 3
>d3ci0k3 d.24.1.6 (K:29-93,K:275-315) Pseudopilin GspK {Escherichia coli [TaxId: 562]}
Probab=8.33 E-value=40 Score=21.96 Aligned_cols=21 Identities=19% Similarity=0.408 Sum_probs=15.3
Q ss_pred ceEEEEEeecCCCccceeccce
Q 031042 57 DEVSLTLNITADLQSLFTWNTK 78 (167)
Q Consensus 57 d~a~i~Fdl~aDLs~lFnWNTK 78 (167)
|.+.|+-.+. |+..+||.|.=
T Consensus 53 d~G~i~g~I~-D~q~cFNLN~L 73 (106)
T d3ci0k3 53 PQGQIAVTLR-DAQSNYFWLRS 73 (106)
T ss_dssp TTEEEEEEEE-ETTCSEEEEEE
T ss_pred CCcEEEEEEE-eCCcccchhhh
Confidence 4466666663 99999999943
No 4
>d1jv2a2 b.1.15.1 (A:599-737) Thigh, calf-1 and calf-2 domains of integrin alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.83 E-value=87 Score=20.54 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=23.0
Q ss_pred eEEEeCCCCC-CCceEEEEEEEEEEeeeeE
Q 031042 121 YRFIDQGHSL-RGKEFNLTLHWHVMPKTGK 149 (167)
Q Consensus 121 Y~~~D~~~~l-~g~~vtl~L~wnv~P~vG~ 149 (167)
.-.=|.|+.| +|.++++.|++.+-+..|.
T Consensus 80 ~v~C~lGnP~~~~~~~~f~l~f~~~~~~~~ 109 (139)
T d1jv2a2 80 QVVCDLGNPMKAGTQLLAGLRFSVHQQSEM 109 (139)
T ss_dssp EEEEECCSSBCSSCBCCEEEEEEECCCSSS
T ss_pred EEEEECCCcccCCCEEEEEEEEEeeccCCC
Confidence 4457888888 7789999999999776654
No 5
>d1xhoa_ d.79.1.2 (A:) Chorismate mutase {Clostridium thermocellum [TaxId: 1515]}
Probab=7.29 E-value=1.4e+02 Score=19.57 Aligned_cols=20 Identities=30% Similarity=0.592 Sum_probs=17.7
Q ss_pred CCcceEEEEEeecCCCccce
Q 031042 54 HGNDEVSLTLNITADLQSLF 73 (167)
Q Consensus 54 ~~~d~a~i~Fdl~aDLs~lF 73 (167)
..+|-+.+-|....||...|
T Consensus 36 ~~edi~Sv~FT~T~DL~a~F 55 (112)
T d1xhoa_ 36 EEDDIISIIFTVTKDLDAAF 55 (112)
T ss_dssp CGGGEEEEEEEECTTCCSSC
T ss_pred CHHHEEEEEEEecCcccccC
Confidence 45789999999999999887
No 6
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=6.60 E-value=3.2e+02 Score=19.39 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=24.2
Q ss_pred eeEEEeccccCCcccceecc-cccceeEEEeCCCC-C-CCceEEEEEE
Q 031042 96 NQVSLWDAIIPAKEFAKFSI-HTSNKYRFIDQGHS-L-RGKEFNLTLH 140 (167)
Q Consensus 96 nqvviWDkII~~k~~a~l~~-~~~~KY~~~D~~~~-l-~g~~vtl~L~ 140 (167)
.+|++..+- .++.+.... .....|.+.+.... . +|..|+|.|+
T Consensus 134 d~V~v~s~~--~~~~~~~W~s~g~~~~~i~~~~~~~~~rGT~I~L~Lk 179 (227)
T d2gqpa1 134 DKVIVTSKH--NNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLK 179 (227)
T ss_dssp EEEEEEEEC--TTSCCEEEEESSSCEEEEECTTCSCSSSEEEEEEEEC
T ss_pred eeEEEEEec--cCCcccEEEecCCCceecccccccccccceEEEEEec
Confidence 445444431 223344433 44556777765443 4 7999999885
No 7
>d1osya_ b.1.21.1 (A:) Fungal immunomodulatory protein, FIP {Golden needle mushroom (Flammulina velutipes) [TaxId: 38945]}
Probab=6.51 E-value=1.6e+02 Score=18.75 Aligned_cols=9 Identities=33% Similarity=0.457 Sum_probs=7.0
Q ss_pred eccceeEEE
Q 031042 74 TWNTKQLFI 82 (167)
Q Consensus 74 nWNTKQvFv 82 (167)
+=||-|+||
T Consensus 87 dt~tiqvfv 95 (114)
T d1osya_ 87 DTKTIQVFV 95 (114)
T ss_dssp TTSCEEEEE
T ss_pred cCceEEEEE
Confidence 458889887
No 8
>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=6.45 E-value=1.3e+02 Score=20.11 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=21.1
Q ss_pred CCceEEEEEEEEEE---eeeeEeeeeeeecceecCCC
Q 031042 131 RGKEFNLTLHWHVM---PKTGKMFANKIVMSGYRLPE 164 (167)
Q Consensus 131 ~g~~vtl~L~wnv~---P~vG~l~~~~~~~~~~~lP~ 164 (167)
+++++.++|+..+- |.+|.++--=....+++||+
T Consensus 110 ~~~~i~Y~l~g~l~~d~pv~G~~tiP~~~~Gei~lP~ 146 (151)
T d1xo8a_ 110 VDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPT 146 (151)
T ss_dssp HHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEECCS
T ss_pred cCCCccEEEEEEEEEecCccCceEeeeccCCEEECCc
Confidence 55677777777654 67785443222344688886
No 9
>d1dbfa_ d.79.1.2 (A:) Chorismate mutase {Bacillus subtilis [TaxId: 1423]}
Probab=6.19 E-value=1.7e+02 Score=19.57 Aligned_cols=20 Identities=35% Similarity=0.576 Sum_probs=17.8
Q ss_pred CCcceEEEEEeecCCCccce
Q 031042 54 HGNDEVSLTLNITADLQSLF 73 (167)
Q Consensus 54 ~~~d~a~i~Fdl~aDLs~lF 73 (167)
..+|-+.+-|...-||...|
T Consensus 38 ~~ediiSv~FT~T~DL~a~F 57 (127)
T d1dbfa_ 38 KPEDVVQMLLSATPDLHAVF 57 (127)
T ss_dssp CGGGEEEEEEEECTTCCSSC
T ss_pred CHHHEEEEEEEecccccccC
Confidence 45789999999999999988
No 10
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=6.10 E-value=1.3e+02 Score=19.89 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=10.7
Q ss_pred EEEEEEEEeCCCCCceeEEEec
Q 031042 81 FIFVAAEYETPKNALNQVSLWD 102 (167)
Q Consensus 81 FvYl~AeY~t~~~~~nqvviWD 102 (167)
|+|++..- .+.|.+||
T Consensus 3 ~~yV~~~~------~~~v~v~D 18 (301)
T d1l0qa2 3 FAYIANSE------SDNISVID 18 (301)
T ss_dssp EEEEEETT------TTEEEEEE
T ss_pred EEEEEECC------CCEEEEEE
Confidence 77876321 25799999
Done!