BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031049
(166 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224055517|ref|XP_002298518.1| predicted protein [Populus trichocarpa]
gi|222845776|gb|EEE83323.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPC--SKPEDILPDS 59
YAI+LYFD AL++++L + ++ I + LI+ E PHITL T +K E I+
Sbjct: 6 YAIELYFDPALENQVLKAWNVLARRQISSQLIEIESRPHITLYSTPFIDPTKLESIIKTF 65
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
+ P+SLS LP NN+L L SL+L + H L +A+ +G++I +EY P
Sbjct: 66 ASKQEPLPLSLSTIGCLPNDNNILFLAPTPSLSLLQFHSQLCDAMRKEGIEISEEYRPDN 125
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P+C +A VP R+G +L +KLP+ G + LV+ P
Sbjct: 126 WIPYCAVAQDVPKARMGESLCVLRDLKLPVAGYAMDIGLVEFSP 169
>gi|225452536|ref|XP_002279925.1| PREDICTED: uncharacterized protein LOC100249281 isoform 1 [Vitis
vinifera]
Length = 183
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPCSKP---EDILPD 58
YAI+LYFD AL++++L + ++ I LI+ E PHITL + P +P E+I+
Sbjct: 5 YAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLF-SSPLIEPARLENIIKS 63
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ P+S S LP N+L L +L+L + H L +AL +G++I +EY P
Sbjct: 64 FAGKQEPLPLSFSSIGSLPNDKNVLFLAPTPTLSLLQFHSQLCDALKKEGIEIGEEYRPD 123
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W PHC +A VP R+G ++L +KLP+ G + LV+ P
Sbjct: 124 SWIPHCPVAQEVPKIRMGEAFSVLRDLKLPVTGYAMDIGLVEFSP 168
>gi|296087705|emb|CBI34961.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPCSKP---EDILPD 58
YAI+LYFD AL++++L + ++ I LI+ E PHITL + P +P E+I+
Sbjct: 79 YAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLF-SSPLIEPARLENIIKS 137
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ P+S S LP N+L L +L+L + H L +AL +G++I +EY P
Sbjct: 138 FAGKQEPLPLSFSSIGSLPNDKNVLFLAPTPTLSLLQFHSQLCDALKKEGIEIGEEYRPD 197
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W PHC +A VP R+G ++L +KLP+ G + LV+ P
Sbjct: 198 SWIPHCPVAQEVPKIRMGEAFSVLRDLKLPVTGYAMDIGLVEFSP 242
>gi|255552670|ref|XP_002517378.1| calmodulin binding protein, putative [Ricinus communis]
gi|223543389|gb|EEF44920.1| calmodulin binding protein, putative [Ricinus communis]
Length = 183
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 3/164 (1%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPC--SKPEDILPDS 59
+AI+LYFD AL++++L + ++ I LI+ E PHITL + +K E I+
Sbjct: 5 FAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLYSSSFVEPTKLESIVKTF 64
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
+ P+SLS LP NN+L L SL+L + L +AL +G++I +EY P
Sbjct: 65 ASKQEPLPLSLSAIGGLPNDNNVLFLAPTPSLSLLQFQSQLCDALKKEGIEISEEYKPDS 124
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P+C +A VP R+G +L +KLP+ G + LV+ P
Sbjct: 125 WIPYCAVAQDVPRARIGEAFCVLRDLKLPVSGYAMDIGLVEFSP 168
>gi|449449194|ref|XP_004142350.1| PREDICTED: uncharacterized protein LOC101208638 [Cucumis sativus]
gi|449492681|ref|XP_004159070.1| PREDICTED: uncharacterized protein LOC101226201 [Cucumis sativus]
Length = 183
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 91/165 (55%), Gaps = 5/165 (3%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVT---QPCSKPEDILPD 58
+AI+LYFD AL++++L + ++ I LI+ E PHITL T +P +K E I+ +
Sbjct: 5 FAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEP-TKVESIVKN 63
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ +SLS LP NN+L L A S++L + L EA+ +G++I +EY G
Sbjct: 64 FASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLG 123
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W PHC +A VP R+ +L +KLP+ G + LV+ P
Sbjct: 124 SWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSP 168
>gi|147844702|emb|CAN82133.1| hypothetical protein VITISV_002643 [Vitis vinifera]
Length = 183
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPCSKP---EDILPD 58
YAI+LYFD AL++++L + ++ I LI+ E PHITL + P +P E+I+
Sbjct: 5 YAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLF-SSPLIEPARLENIIKS 63
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ +S S LP N+L L +L+L + H L +AL +G++I +EY P
Sbjct: 64 FAGKQEPLXLSFSSIGSLPNDKNVLFLAPTPTLSLLQFHSQLCDALKKEGIEIGEEYRPD 123
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W PHC +A VP R+G ++L +KLP+ G + LV+ P
Sbjct: 124 SWIPHCPVAQEVPKIRMGEAFSVLRDLKLPVTGYAMDIGLVEFSP 168
>gi|388496900|gb|AFK36516.1| unknown [Lotus japonicus]
gi|388513163|gb|AFK44643.1| unknown [Lotus japonicus]
Length = 182
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 5/167 (2%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVT---QPCSKPEDIL 56
M YAI+LY D AL++++L + ++ I LI+ E PHITL T +P SK E +L
Sbjct: 1 MGYAIELYMDPALENQVLKAWNVIARRQISTQLIEMESRPHITLFSTPFLEP-SKLEPLL 59
Query: 57 PDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
D FP+S S P +N L L SL+L L +A+ +G+ + EY
Sbjct: 60 KTLSTKHDPFPLSFSSVGAFPGDHNTLFLSPTPSLSLLHFQSQLCDAIRKEGVDVPDEYA 119
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
G W P C +A VP R+ ++L +KLP+ G V +VQ P
Sbjct: 120 LGSWIPFCSVAHQVPKARMAEAFSLLRDLKLPVSGYAVDVAVVQFSP 166
>gi|294460847|gb|ADE75997.1| unknown [Picea sitchensis]
Length = 183
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPCSKP---EDILPD 58
YA++LYFD AL++++L + ++ I LI+ E PHITLL + P P ++I+ +
Sbjct: 5 YAVELYFDPALENQVLKAWNVLARRQISTQLIEIEARPHITLL-SSPTLDPLKLQNIIRN 63
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ ++LS N+L L SL++ H LYE L G++ Y P
Sbjct: 64 FSAKQEPLALTLSSVGSFSTDENVLFLAPTPSLSILTFHGQLYELLKRGGIEAGDSYQPD 123
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W PHC +A VP +R+ +IL KLP+ G + + LV+ P
Sbjct: 124 NWVPHCTVAQDVPRNRMAEAFSILRDFKLPISGYILDIGLVEFSP 168
>gi|224141313|ref|XP_002324018.1| predicted protein [Populus trichocarpa]
gi|222867020|gb|EEF04151.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 8/165 (4%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPC---SKPEDILPD 58
YAI+LY D AL++++L + ++ I + LI+ E PH+TL + P +K E I+
Sbjct: 6 YAIELYLDPALENQVLKAWNVLARRQISSQLIEIESRPHLTL-YSAPFIDPTKLESIIKT 64
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ P+SLS NNLL L +L+L + H L +A+ +G++I ++Y P
Sbjct: 65 FASKQEPLPLSLSTIGC---HNNLLFLAPTPTLSLLQFHSQLCDAMRREGIEISEDYRPE 121
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P+C +A VP R+ +L +KLP+ G + LV+ P
Sbjct: 122 NWIPYCAVAQDVPKARMAESLCVLRDLKLPVAGYAMDIGLVEFSP 166
>gi|356550070|ref|XP_003543413.1| PREDICTED: uncharacterized protein LOC100777475 [Glycine max]
Length = 182
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPCSKPEDILPDSIP 61
+AI+LY + AL++++L + ++ I LI+ E PHITL + P +P + DS+
Sbjct: 6 FAIELYLEPALENQVLKAWNVLARRQISTELIEMESRPHITLF-SAPFLEPSKL--DSLL 62
Query: 62 LV-----DKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
V D P++ S + P NNLL L SL+L L +A+ +G++I E+
Sbjct: 63 KVFASKHDPLPLTFSSLATFP--NNLLFLAPTPSLSLLHFQSQLCDAIRKEGIEIAHEFA 120
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P+C +A VP +R+ ++L ++KLP+ G V LVQ P
Sbjct: 121 FNSWIPYCSVAHHVPQNRMPEAFSLLRELKLPVSGYAMDVALVQFSP 167
>gi|302802981|ref|XP_002983244.1| hypothetical protein SELMODRAFT_228924 [Selaginella moellendorffii]
gi|300148929|gb|EFJ15586.1| hypothetical protein SELMODRAFT_228924 [Selaginella moellendorffii]
Length = 184
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNL-IKPEDEPHITLLVTQPCSKPEDI-LPDSI 60
+A LYFD AL+++IL+ ++ I +L I PH+ L VT +D+ LP
Sbjct: 5 FAFALYFDAALENQILELWNVLARRKITSLLIDSGSRPHMRLSVT----TADDLELPKLR 60
Query: 61 PLVDKFP-------ISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDK 113
V+ F IS S L L A ++ L HD +E L G++
Sbjct: 61 TTVESFAAQEGPVAISFSAAGGFFTDETSLFLTPAPTIQLLAFHDRFHELLQVMGVESLD 120
Query: 114 EYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
Y PG WFPHC +A +P +R+ + + ++KLPL G + V +V+L P
Sbjct: 121 VYQPGNWFPHCSVAQELPRNRLADAFAVFQELKLPLTGHICDVGMVELTP 170
>gi|302755788|ref|XP_002961318.1| hypothetical protein SELMODRAFT_227238 [Selaginella moellendorffii]
gi|300172257|gb|EFJ38857.1| hypothetical protein SELMODRAFT_227238 [Selaginella moellendorffii]
Length = 184
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNL-IKPEDEPHITLLVTQPCSKPEDI-LPDSI 60
+A LYFD AL+++IL+ ++ I +L I PH+ L +T +D+ LP
Sbjct: 5 FAFALYFDAALENQILELWNVLARRKITSLLIDSGSRPHMRLSLT----TADDLELPKLR 60
Query: 61 PLVDKFP-------ISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDK 113
V+ F IS S L L A ++ L HD +E L G++
Sbjct: 61 TTVESFAAQEGPVAISFSAAGGFFTDKTSLFLTPAPTIQLLAFHDRFHELLQVMGVESLD 120
Query: 114 EYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
Y PG WFPHC +A +P +R+ + + ++KLPL G + V +V+L P
Sbjct: 121 VYQPGNWFPHCSVAQELPRNRLADAFAVFQELKLPLTGHICDVGMVELTP 170
>gi|356571575|ref|XP_003553952.1| PREDICTED: uncharacterized protein LOC100802388 [Glycine max]
Length = 186
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIP-NLIKPEDEPHITLLVT---QPCSKPEDIL 56
+ +AI+LY D AL++++L + ++ I +LI+ E PHITL +P SK E +L
Sbjct: 5 LGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEP-SKLESLL 63
Query: 57 PDSIPLVDKFPISLSLFSVLPRK-NNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEY 115
D P++ S + P +NLL L SL+L L L +A+ +GL+I +Y
Sbjct: 64 KGFASKHDPLPLTFSSLATFPNDPDNLLFLAPTPSLSLLHLQSQLCDAIRKEGLEIGDDY 123
Query: 116 VPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P+C +A VP +R+ ++L ++KLP+ G + LVQ P
Sbjct: 124 AFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSP 171
>gi|297805674|ref|XP_002870721.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316557|gb|EFH46980.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 183
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQ--PCSKPEDILPDS 59
YAI+LYFD AL++++L + + I LI E PHITL T ++ E ++ +
Sbjct: 5 YAIELYFDPALENQVLKAWNVFARRQISTKLINTESRPHITLFSTSFFDSTRLESVIKNF 64
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
+ + IS S NN+L L SL+L +L L + + + ++I ++Y
Sbjct: 65 VSKQEPISISFSTIGTFSSDNNVLFLSPTPSLSLLQLQSQLCDTMKKESVEIGEDYRVDS 124
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P C +A VP R+ ++L +KLP+ G + LV+ P
Sbjct: 125 WVPFCPVALDVPKSRMAEAFSVLRDLKLPVNGYGMEIGLVEFSP 168
>gi|15242603|ref|NP_198835.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
[Arabidopsis thaliana]
gi|10177506|dbj|BAB10900.1| unnamed protein product [Arabidopsis thaliana]
gi|34098925|gb|AAQ56845.1| At5g40190 [Arabidopsis thaliana]
gi|37202088|gb|AAQ89659.1| At5g40190 [Arabidopsis thaliana]
gi|51968364|dbj|BAD42874.1| unknown protein [Arabidopsis thaliana]
gi|51969122|dbj|BAD43253.1| unknown protein [Arabidopsis thaliana]
gi|332007135|gb|AED94518.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
[Arabidopsis thaliana]
Length = 183
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQ--PCSKPEDILPDS 59
YAI+LYFD AL++++L + + I LI E PHITL T ++ E ++ +
Sbjct: 5 YAIELYFDPALENQVLKAWNVFARRQISTKLINTESRPHITLFSTSFFDSTRLESVIKNF 64
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
+ + IS S NN+L L SL+L +L L + L + + I +EY
Sbjct: 65 VSKQEPISISFSTIGSFSSDNNVLFLSPTPSLSLLQLQTQLCDMLKKESVDIGEEYRVDS 124
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P C +A VP R+ ++L +KLP+ G + LV+ P
Sbjct: 125 WVPFCPVALDVPKSRMAEAFSVLRDLKLPVNGYGMEIGLVEFSP 168
>gi|51970098|dbj|BAD43741.1| unknown protein [Arabidopsis thaliana]
Length = 183
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQ--PCSKPEDILPDS 59
YAI+LYFD AL++++L + + I LI E PHITL T ++ E ++ +
Sbjct: 5 YAIELYFDPALENQVLKAWNVFARRQISTKLINTESRPHITLFSTSFFDSTRLESVIKNF 64
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
+ + IS S NN+L L SL+L +L L + L + + I +E+
Sbjct: 65 VSKQEPISISFSTIGSFSSDNNVLFLSPTPSLSLLQLQTQLCDMLKKESVDIGEEFRVDS 124
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P C + VP R+ ++L +KLP+ G + LV+ P
Sbjct: 125 WVPFCPVVLDVPKSRMAEAFSVLRDLKLPVNGYGMEIGLVEFSP 168
>gi|297815088|ref|XP_002875427.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321265|gb|EFH51686.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 184
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQ--PCSKPEDILPDS 59
YAI+LYFD +L++++L + + I LI E PHITL + +K E IL
Sbjct: 6 YAIELYFDPSLENQVLKAWNVFARRQISTKLINNESRPHITLFSSSFIDSTKLEPILKSF 65
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
+ +S S NN L L SL+L +L L E + +G +I +EY
Sbjct: 66 SSKQEPISLSFSSIGSFSNDNNALFLSPTPSLSLLQLQVQLCEVIKKEGFEIGEEYRVDS 125
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P C +A VP R+ +L +KLP+ G + LV+ P
Sbjct: 126 WVPFCPVAVDVPKSRISEGFLVLRDLKLPVNGYAMDIGLVKFSP 169
>gi|406962579|gb|EKD88890.1| hypothetical protein ACD_34C00285G0003 [uncultured bacterium]
Length = 183
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNI-PNLIKPEDEPHITLLVTQPCSKPE--DILPDS 59
YA++LYFD ++ + + + +L I P L D PH++L V + I
Sbjct: 9 YAVELYFDQKMEDEFFSFRESLYKLGIDPVLGLLGDRPHVSLAVFGEIDIDQIIKITTAF 68
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
P + L F P +N++ LL S L ELH +E L + + Y+PG
Sbjct: 69 APQCKQLAAQLDAFGAFPTTSNVIYLLPVPSQPLLELHRKFHELLQKEKILSSHYYLPGQ 128
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W PHC L +P D++ + K P++G + ++ P
Sbjct: 129 WVPHCTLEFELPDDQLNLAFQLCKKHFSPIRGTFSTIGVIAFRP 172
>gi|219670882|ref|YP_002461317.1| hypothetical protein Dhaf_4887 [Desulfitobacterium hafniense DCB-2]
gi|219541142|gb|ACL22881.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
Length = 182
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK----PEDEPHITLLVTQPC--SKPED 54
M YAI LYF++ + I M+L L + NL K PHITL + +K ++
Sbjct: 1 MSYAINLYFNEEAEQSI---MRLWESLALLNLGKCMSCTNGRPHITLAIYNDLDLTKAQE 57
Query: 55 ILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKE 114
IL V F + + P + L + +L ++H L+ ALA Q
Sbjct: 58 ILGTLAQAVPSFELVFLQVGIFPLHKGTIFLTPNLTHDLFQVHGMLHAALAAWQEQGWDY 117
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
Y P +W PHC L+ + + V + K ++ +E + +V L P
Sbjct: 118 YKPQIWHPHCTLSMETAVEDIPKVLGEILKDFRSIEVMIESIGIVSLDP 166
>gi|89897734|ref|YP_521221.1| hypothetical protein DSY4988 [Desulfitobacterium hafniense Y51]
gi|423075974|ref|ZP_17064688.1| hypothetical protein HMPREF0322_04129 [Desulfitobacterium hafniense
DP7]
gi|89337182|dbj|BAE86777.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361853009|gb|EHL05200.1| hypothetical protein HMPREF0322_04129 [Desulfitobacterium hafniense
DP7]
Length = 187
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK----PEDEPHITLLVTQPC--SKPED 54
M YAI LYF++ + I M+L L + NL K PHITL + +K ++
Sbjct: 6 MSYAINLYFNEEAEQSI---MRLWESLALLNLGKCMSCTNGRPHITLAIYNDLDLTKAQE 62
Query: 55 ILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKE 114
IL V F + + P + L + +L ++H L+ ALA Q
Sbjct: 63 ILGTLAQAVPSFELVFLQVGIFPLHKGTIFLTPNLTNDLFQVHGMLHAALAAWQEQGWDY 122
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
Y P +W PHC L+ + + V + K ++ +E + +V L P
Sbjct: 123 YKPQIWHPHCTLSMETAVEDIPKVLGEILKDFRSIEVMIESIGIVSLDP 171
>gi|330466703|ref|YP_004404446.1| hypothetical protein VAB18032_13670 [Verrucosispora maris
AB-18-032]
gi|328809674|gb|AEB43846.1| hypothetical protein VAB18032_13670 [Verrucosispora maris
AB-18-032]
Length = 171
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Query: 1 MQYAIKLYFDDALKSKI---LDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILP 57
M A++LY D +I D+++ ++ +L++ PH++L V P PE +
Sbjct: 1 MVAALELYLDPVATRRIRVLWDALEAEGVQSLRSLLEQRHRPHVSLAVA-PRFDPEQVAA 59
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
P+ LS +L L A + L H +Y+ LA G+ + + Y P
Sbjct: 60 ALAGFTVAAPLRLSFQHAGQFVGRVLWLGPAPTAELLAHHRRVYDRLAAAGITLHEHYHP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDV 153
G W PHC L+ VP + +V LPL+ +
Sbjct: 120 GRWIPHCTLSMRVPNTLMAAAIRRCLEV-LPLEATI 154
>gi|30689069|ref|NP_850643.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
[Arabidopsis thaliana]
gi|11994132|dbj|BAB01134.1| unnamed protein product [Arabidopsis thaliana]
gi|26450294|dbj|BAC42263.1| unknown protein [Arabidopsis thaliana]
gi|332643886|gb|AEE77407.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
[Arabidopsis thaliana]
Length = 184
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPC---SKPEDILPD 58
YAI+LYFD AL++++L + + I LI E PHITL T +K E I+
Sbjct: 5 YAIELYFDPALENQVLKAWNVFARRQISTYLINNESRPHITLFSTTSSIDSTKLEPIIKS 64
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ +S S +N L L SL+L +L L E + +G +I +EY
Sbjct: 65 FSSKQEPISLSFSSIGSFSSDDNALFLSPTPSLSLIQLQLQLCEVIKKEGFEIGEEYRVD 124
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W P C +A VP R+ +L +KL + G + LV+ P
Sbjct: 125 SWVPFCSVAVDVPKSRISEGFLVLRDLKLLVYGYAMDIGLVEFSP 169
>gi|258514812|ref|YP_003191034.1| hypothetical protein Dtox_1548 [Desulfotomaculum acetoxidans DSM
771]
gi|257778517|gb|ACV62411.1| hypothetical protein Dtox_1548 [Desulfotomaculum acetoxidans DSM
771]
Length = 177
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
Query: 1 MQYAIKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLLVTQPC--SKPEDILP 57
M YAI LYFD + I +L ++ +++ + PHITL + + E
Sbjct: 1 MTYAINLYFDGKSERAIQHIWDELAKDETSTYMVEIDSRPHITLTIYHDIDINDFEKRFT 60
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
I + V P+ + L + NL ++H + + G Q Y
Sbjct: 61 QFTNTTHSIEIKCNYIGVFPKNKGTVFLAPTMTDNLMKMHRDFHHLFEDYGNQEWDYYKS 120
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
WFPHC ++ + V + + + P++ +E + +V+L P
Sbjct: 121 NCWFPHCTISNETSDEVVPEIIRRVLNIFQPMKIRIESIGIVKLYP 166
>gi|334342333|ref|YP_004547313.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334093687|gb|AEG62027.1| hypothetical protein Desru_3827 [Desulfotomaculum ruminis DSM 2154]
Length = 178
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPC--SKPEDILP 57
M YA+ LYF+ ++ I++ + + L LI PHITL + + + + L
Sbjct: 1 MTYAVNLYFNQEAENYIINIWRQLTALEKGKCLICCNSRPHITLAIYEGIDLEETQKRLK 60
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
+ F + + P+ + L + L ++H + ++A Q Y P
Sbjct: 61 AFARNIHSFHLQFLQIGIFPQPKGAIFLTPNLTDELFKVHRDFHQAFMDYQGQGWDYYKP 120
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
W+PHC LA P + + V + KV P++ VE + + L P
Sbjct: 121 NAWYPHCTLALETPLEAIPCVLGEILKVFQPMEVCVESIGMASLDP 166
>gi|424858291|ref|ZP_18282323.1| hypothetical protein OPAG_06028 [Rhodococcus opacus PD630]
gi|356661978|gb|EHI42277.1| hypothetical protein OPAG_06028 [Rhodococcus opacus PD630]
Length = 180
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 12/174 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M +++L FD+A + + + + +P+ + E PHITL V + D L
Sbjct: 8 MVQSVELLFDEATDVAVRAEWQRLWDAGMPSRTRVRAESNRPHITLFVARHIPPEIDELL 67
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
F I L + ++ L L+ S L LH ++++ LA +I P
Sbjct: 68 GRRIATPSFHIRLGGLVMFGGRHVTLSRLVVPSKALLSLHRSVFD-LAAHATEITPHIRP 126
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNIL--------AKVKLPLQGDVEHVRLVQLPP 163
G W PH LA +P D++ +L A V GD + +V PP
Sbjct: 127 GEWTPHVTLARRLPADQIAEAARLLDGGDIIGRASVVRRWDGDAKREWVVTAPP 180
>gi|384100141|ref|ZP_10001206.1| hypothetical protein W59_02099 [Rhodococcus imtechensis RKJ300]
gi|397730246|ref|ZP_10497005.1| hypothetical protein JVH1_1414 [Rhodococcus sp. JVH1]
gi|432342252|ref|ZP_19591546.1| hypothetical protein Rwratislav_34569 [Rhodococcus wratislaviensis
IFP 2016]
gi|383842362|gb|EID81631.1| hypothetical protein W59_02099 [Rhodococcus imtechensis RKJ300]
gi|396933638|gb|EJJ00789.1| hypothetical protein JVH1_1414 [Rhodococcus sp. JVH1]
gi|430772757|gb|ELB88491.1| hypothetical protein Rwratislav_34569 [Rhodococcus wratislaviensis
IFP 2016]
Length = 173
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 12/174 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M +++L FD+A + + + + +P+ + E PHITL V + D L
Sbjct: 1 MVQSVELLFDEATDVAVRAEWQRLWDAGMPSRTRVRAESNRPHITLFVARHIPPEIDELL 60
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
F I L + ++ L L+ S L LH ++++ LA +I P
Sbjct: 61 GRRIATPSFHIRLGGLVMFGGRHVTLSRLVVPSKALLSLHRSVFD-LAAHATEITPHIRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNIL--------AKVKLPLQGDVEHVRLVQLPP 163
G W PH LA +P D++ +L A V GD + +V PP
Sbjct: 120 GEWTPHVTLARRLPADQIAEAARLLDGGDIIGRASVVRRWDGDAKREWVVTAPP 173
>gi|111017999|ref|YP_700971.1| hypothetical protein RHA1_ro00985 [Rhodococcus jostii RHA1]
gi|110817529|gb|ABG92813.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 187
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 12/174 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M +++L FD+A + + + + +P+ + E PHITL V + D L
Sbjct: 15 MVQSVELLFDEATDVAVRAEWQRLWDAGMPSRTRVRAESNRPHITLFVARHIPPEIDELL 74
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
F I L + ++ L L+ S L LH ++++ LA +I P
Sbjct: 75 GRRIATPSFHIRLGGLVMFGGRHVTLSRLVVPSKALLSLHRSVFD-LAAHATEITPHIRP 133
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNIL--------AKVKLPLQGDVEHVRLVQLPP 163
G W PH LA +P D++ +L A V GD + +V PP
Sbjct: 134 GEWTPHVTLARRLPADQIAEAARLLDGGDIIGRASVVRRWDGDAKREWVVTAPP 187
>gi|392395632|ref|YP_006432234.1| 2'-5' RNA ligase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390526710|gb|AFM02441.1| 2'-5' RNA ligase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 181
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 3/166 (1%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK-PEDEPHITLLVTQPC--SKPEDILP 57
M YAI LYF++ + I+ + + LNI + PHITL + +K ++++
Sbjct: 1 MSYAINLYFNEEAEQSIMRIWESLALLNIGKCMSCTNGRPHITLAIYNDLDLTKAKEMIN 60
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
V F ++ + P + L + +L ++H L++A + + Y P
Sbjct: 61 ALAQAVHSFKLAFLQIGIFPLHKGTIFLTPNLTDDLFQVHRMLHDAFSAWEEEGWDYYKP 120
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
+W PHC L+ P + + + + K ++ +E + + L P
Sbjct: 121 QIWHPHCTLSMETPVEEIPKMLEEILKDFQSIEVTIESIGMASLDP 166
>gi|419965169|ref|ZP_14481118.1| hypothetical protein WSS_A23633 [Rhodococcus opacus M213]
gi|414569565|gb|EKT80309.1| hypothetical protein WSS_A23633 [Rhodococcus opacus M213]
Length = 173
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 12/174 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M +++L FD+A + + + + +P+ + E PHITL V + D L
Sbjct: 1 MVQSVELLFDEATDVAVRAEWQRLWDAGMPSRTRVRAESNRPHITLFVARHIPPEIDELL 60
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
F + L + ++ L L+ S L LH ++++ LA +I P
Sbjct: 61 GRRIATPSFHVRLGGLVMFGGRHVTLSRLVVPSKALLSLHRSVFD-LAAHATEITPHIRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNIL--------AKVKLPLQGDVEHVRLVQLPP 163
G W PH LA +P D++ +L A V GD + +V PP
Sbjct: 120 GEWTPHVTLARRLPADQIAEAARLLDGGDIIGRASVVRRWDGDAKREWVVTAPP 173
>gi|377567052|ref|ZP_09796297.1| hypothetical protein GOSPT_130_00380 [Gordonia sputi NBRC 100414]
gi|377525786|dbj|GAB41462.1| hypothetical protein GOSPT_130_00380 [Gordonia sputi NBRC 100414]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK---PEDEPHITLLVTQPCSKPEDIL- 56
M ++++ FDD + ++ + N+PN + P + PH+T T D
Sbjct: 1 MAHSVEFLFDDESERRLRALWDALAASNLPNAGRNPSPTNRPHVTAAATHRIDAAADHAI 60
Query: 57 ---PDSIPLVDKFPISLSLFSVLPRKNNLL-CLLIAQSLNLRELHDNLYEALATKGLQID 112
+++P+ P+++ V R + L+ LL+ + L H + EAL+ D
Sbjct: 61 HQCTETLPI----PVTIGAPLVFGRDDRLVVALLVVPTARLLAAHARVVEALSGHAFTAD 116
Query: 113 KE------YVPGVWFPHCMLAPSVPTDRVGNVCNIL 142
E +PG W PH +A V +D +G+V L
Sbjct: 117 DEPGVFSHSLPGSWTPHVTMARRVHSDTLGDVVAAL 152
>gi|323357327|ref|YP_004223723.1| hypothetical protein MTES_0879 [Microbacterium testaceum StLB037]
gi|323273698|dbj|BAJ73843.1| hypothetical protein MTES_0879 [Microbacterium testaceum StLB037]
Length = 176
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 23/151 (15%)
Query: 4 AIKLYFDDALKSKILDSMKLVRELNIPNLIKPE---DEPHITLLVTQPCSKP--EDILPD 58
+++L FD A + + + + +P+ + + + PH+T+LV +P E++ D
Sbjct: 2 SLELTFDAASDAAVRREWHALLDAGLPSQAQHQGASNRPHVTMLV-----RPFLEEV--D 54
Query: 59 SIPLVDKFPISLSL-----FSVLPRKNNLLCLLIAQSLNLRELHDNLY-EALATKGLQID 112
L D P++L+L F V +N ++ + S +L ELH ++ A A +G
Sbjct: 55 GTGLEDMLPLALTLGAPLLFGV--GRNRVIARSVVPSASLLELHAAVHSRAGAVEG---H 109
Query: 113 KEYVPGVWFPHCMLAPSVPTDRVGNVCNILA 143
PG W PH LA VP +RVG +LA
Sbjct: 110 DHTAPGGWTPHVTLARRVPLERVGEALAVLA 140
>gi|431795363|ref|YP_007222268.1| 2'-5' RNA ligase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785589|gb|AGA70872.1| 2'-5' RNA ligase [Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 181
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKP-EDEPHITLLVTQPCSKPEDILPDS 59
M YAI LYF++ + I++ + + L I + PHITL + +
Sbjct: 1 MSYAINLYFNEEAEKSIINIWETLSLLGIGKCMSCLNGRPHITLAIFDELDLAQ-AREQL 59
Query: 60 IPLVDKFPI-SLSLFSVLPRKNNLLCLLIAQSL--NLRELHDNLYEALATKGLQIDKEYV 116
+ L + P+ SL L V +N + +A +L L ++H +L++ L Y
Sbjct: 60 MHLAETVPVFSLKLLQVGMFPHNKGAIFLAPNLPDKLFQIHRDLHKMLGAWDEHSWDYYK 119
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
P W+PHC L+ P + V L K+ P+ +E + +V L P
Sbjct: 120 PQDWYPHCTLSLETPIGEIPEVLRELLKIFQPIDITIEAIGMVSLEP 166
>gi|134097044|ref|YP_001102705.1| hypothetical protein SACE_0431 [Saccharopolyspora erythraea NRRL
2338]
gi|291007015|ref|ZP_06564988.1| hypothetical protein SeryN2_21048 [Saccharopolyspora erythraea NRRL
2338]
gi|133909667|emb|CAL99779.1| hypothetical protein SACE_0431 [Saccharopolyspora erythraea NRRL
2338]
Length = 175
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKP---EDEPHITLLVTQ--PCSKPEDI 55
M +A+ L+FDD+ + + K + +P+L PH+TL V P D+
Sbjct: 1 MAHALGLFFDDSAEDAVRALWKRLEAAGVPSLASRGHRRHRPHVTLAVAGRIPEGARHDL 60
Query: 56 LPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEY 115
+ + L+ + L P ++L L L +H +++ LA K Y
Sbjct: 61 RAE-LSLLSVPDLWLYTLGTFPSDESVLLLGAVVDTELIAVHSAVHDVLAGKVSAPSAYY 119
Query: 116 VPGVWFPHCMLA 127
PG W PHC LA
Sbjct: 120 FPGAWIPHCTLA 131
>gi|444433043|ref|ZP_21228189.1| hypothetical protein GS4_29_00090 [Gordonia soli NBRC 108243]
gi|443886107|dbj|GAC69910.1| hypothetical protein GS4_29_00090 [Gordonia soli NBRC 108243]
Length = 192
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLI---KPEDEPHITLLVTQPCSKPEDILP 57
M ++++L DD + I D + +P+L+ P + PH+TLL + S D
Sbjct: 1 MAHSLELLLDDHSEQAIRDQWSALTAAGLPSLVTNTSPTNRPHVTLLAARRISPSVDAA- 59
Query: 58 DSIPLVDKFPISLSLFS--VLPR-KNNLLCLLIAQSLNLRELHDNLYE------ALATKG 108
+P + PIS + + V R + +L L+ S L LH + A AT
Sbjct: 60 -LVPATQRLPISAIVGAPIVFGRGERRVLARLVVPSAELLSLHAQVSRVARDHLAHATGP 118
Query: 109 LQIDKEY---VPGVWFPHCMLAPSVPTDRVGNVCNIL 142
+ D + PG W PH LA + D++ ++L
Sbjct: 119 VSTDGAFEHTTPGAWTPHVTLARRLTADQLSAALSVL 155
>gi|383782932|ref|YP_005467499.1| hypothetical protein AMIS_77630 [Actinoplanes missouriensis 431]
gi|381376165|dbj|BAL92983.1| hypothetical protein AMIS_77630 [Actinoplanes missouriensis 431]
Length = 169
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNL--IKPEDEPHITLLVTQ---PCSKPEDI 55
M A++LY D +I + + + IP+L + + PH++L P + + +
Sbjct: 1 MVAALELYLDVDATRRIRTLWRALDDEGIPSLGSLHQKHRPHVSLAAAHHIDPHAVADAL 60
Query: 56 LPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEY 115
D +PL P+ ++ +L L + + L LH+ ++ L +G+++ + Y
Sbjct: 61 --DGVPLGRGLPVEMNFAGQF--VGRVLWLGVTVTPELLALHEVVHTRLHERGVEVWEHY 116
Query: 116 VPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDV 153
PG W PHC ++ VP +G +V LPL +
Sbjct: 117 RPGRWVPHCTISLRVPNPVMGQAIRRCLEV-LPLTATI 153
>gi|315502949|ref|YP_004081836.1| hypothetical protein ML5_2161 [Micromonospora sp. L5]
gi|315409568|gb|ADU07685.1| hypothetical protein ML5_2161 [Micromonospora sp. L5]
Length = 171
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN---LIKPEDEPHITLLVTQPCSKPEDILP 57
M A++LY D +I L+ +P+ L+ PH++L V P P+ +
Sbjct: 1 MVAALELYLDTDATRRIRVLWDLLESDGVPSMRSLLAQRHRPHVSLAVA-PRLDPQRVAE 59
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
V P+ L +L L A + L H ++E LA G+++ + Y P
Sbjct: 60 ALAGTVVAAPLRLEFQHAGQFLGRVLWLGPAPTPELLAHHAAVHERLARAGVEVVEHYRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDV 153
G W PHC L+ VP +G +V LPL V
Sbjct: 120 GRWVPHCTLSMRVPNPLMGAAVRRCLEV-LPLTATV 154
>gi|348173016|ref|ZP_08879910.1| hypothetical protein SspiN1_21253 [Saccharopolyspora spinosa NRRL
18395]
Length = 175
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED---EPHITLLVTQPCSKP-EDIL 56
M A+ +FDDA +S I + + + +P++ D PH+T L
Sbjct: 1 MAQALVSFFDDAAESGIRAFWRRLDDAGVPSIATRSDGKHRPHVTFAAAAGIPTAARKAL 60
Query: 57 PDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
+ L+ + L P ++ +L L L +H +++ALA + Y
Sbjct: 61 RTELELLSIPDLWLHTLGTFPGEDRVLLLGAVVDTELLAVHSAVHDALAGRVQHPSAYYF 120
Query: 117 PGVWFPHCMLAPSV 130
PG W PHC LA +
Sbjct: 121 PGAWIPHCTLAQGI 134
>gi|226360129|ref|YP_002777907.1| hypothetical protein ROP_07150 [Rhodococcus opacus B4]
gi|226238614|dbj|BAH48962.1| hypothetical protein [Rhodococcus opacus B4]
Length = 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 12/174 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M +++L FD+A + + + + +P+ + E PHITL V + D L
Sbjct: 1 MVQSVELLFDEATDVAVRAEWQRLWDAGMPSRTRVRAESNRPHITLFVARHIPPEIDELL 60
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
F + L + ++ L L+ S L LH ++++ LA ++ P
Sbjct: 61 GRRIATPSFHVRLGGLVMFGGRHVTLSRLVVPSKALLSLHRSVFD-LAEHATEVTPHIRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNIL--------AKVKLPLQGDVEHVRLVQLPP 163
G W PH LA +P D++ +L A V GD + +V PP
Sbjct: 120 GEWTPHVTLARRLPADQIPEAARLLDGGDIVGRASVVRRWDGDAKREWVVTAPP 173
>gi|302866539|ref|YP_003835176.1| hypothetical protein Micau_2054 [Micromonospora aurantiaca ATCC
27029]
gi|302569398|gb|ADL45600.1| hypothetical protein Micau_2054 [Micromonospora aurantiaca ATCC
27029]
Length = 171
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN---LIKPEDEPHITLLVTQPCSKPEDILP 57
M A++LY D +I L+ +P+ L+ PH++L V P P +
Sbjct: 1 MVAALELYLDTDATRRIRVLWDLLESDGVPSMRSLLAQRHRPHVSLAVA-PRLDPHRVAE 59
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
V P+ L +L L A + L H ++E LA G+++ + Y P
Sbjct: 60 ALSGTVVAAPLRLEFQHAGQFLGRVLWLGPAPTPELLAHHAAVHERLARAGVEVVEHYRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDV 153
G W PHC L+ VP +G +V LPL V
Sbjct: 120 GRWVPHCTLSMRVPNPLMGAAVRRCLEV-LPLTATV 154
>gi|386852981|ref|YP_006270994.1| hypothetical protein ACPL_8048 [Actinoplanes sp. SE50/110]
gi|359840485|gb|AEV88926.1| hypothetical protein ACPL_8048 [Actinoplanes sp. SE50/110]
Length = 169
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 10/158 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNL--IKPEDEPHITLLVT---QPCSKPEDI 55
M A++LY D ++ + + IP L + P PH++L +P + +
Sbjct: 1 MVAALELYLDVDATRRVRTLWRALEAEGIPTLGSLHPRHRPHVSLAAARTIEPYAAAAAL 60
Query: 56 LPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEY 115
D + + + + +L L I + L + H ++E LA G+++ + Y
Sbjct: 61 --DGLNVGRGLSVRMDFAGQF--VGRVLWLGITMTPELMDHHRAVHERLAAGGVEVWEHY 116
Query: 116 VPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDV 153
PG+W PHC ++ VP + ++ LPL G +
Sbjct: 117 RPGLWVPHCTVSLRVPNPMMAAAIRRCLEI-LPLSGTI 153
>gi|326521186|dbj|BAJ96796.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 235
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 74/177 (41%), Gaps = 20/177 (11%)
Query: 2 QYAIKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
YA++LYFD AL++++L + L R LI PH+ LL P LPD +
Sbjct: 45 HYAVELYFDPALENQVLKAWNALARRQLSSRLIDTASRPHLPLL-----HLPAAALPDPL 99
Query: 61 PLVDKFPISLSLFSVLPRK------------NNLLCLLIAQSLNLRELHDNLYEALAT-K 107
L S LP +L L S L LH L E L
Sbjct: 100 RLAPALRALASRIDPLPLALSSLASPPSSLDAGVLFLSPTPSAALLGLHAQLCELLRKDT 159
Query: 108 GLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVK-LPLQGDVEHVRLVQLPP 163
GL++ + P W P C +A VP R+ +L ++K LP+ G + LV++ P
Sbjct: 160 GLEVPDGFRPDNWVPRCAVAVDVPRGRMAEAFCVLRELKLLPVSGYGMDIALVEVAP 216
>gi|359423918|ref|ZP_09215044.1| hypothetical protein GOAMR_20_01740 [Gordonia amarae NBRC 15530]
gi|358240838|dbj|GAB04626.1| hypothetical protein GOAMR_20_01740 [Gordonia amarae NBRC 15530]
Length = 174
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIP---NLIKPEDEPHITLLVTQPCSKPEDILP 57
M ++++L DDAL I + + E +P N+ P + PH+TL+ S D
Sbjct: 1 MAHSLELLVDDALDGIIRAQWRTLAEAGLPSRANVAAPTNRPHVTLVAAPSISSSVDAA- 59
Query: 58 DSIPLVDKFPISLSLFSVLPRKNN---LLCLLIAQSLNLRELHDNLYEALATKGLQIDKE 114
+PL + P+ + L ++ + +L L+ S L +H A + +D
Sbjct: 60 -LVPLAMRLPVPVRLGGLVVFGGHNRFVLARLVVASSELLSIH-----AATLRLAAVDDP 113
Query: 115 YV---PGVWFPHCMLAPSVPTDRVGNVCNIL 142
+ PG W PH LA + ++VG +L
Sbjct: 114 FAHGLPGEWTPHITLARRMTAEQVGTALALL 144
>gi|357158221|ref|XP_003578056.1| PREDICTED: uncharacterized protein LOC100844622 [Brachypodium
distachyon]
Length = 236
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 26/180 (14%)
Query: 2 QYAIKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
YA++LYFD AL++++L + L R LI PH+ LL P LPD +
Sbjct: 46 HYAVELYFDPALENQVLKAWNALARRQLSSRLIDTASRPHLPLL-----HLPAAALPDPL 100
Query: 61 PLVDKFPISLSLFSVL---------------PRKNNLLCLLIAQSLNLRELHDNLYEALA 105
L P +L S L +L L S L LH L E L
Sbjct: 101 RLA---PCLRALASRLDPLPLALSSLASPPSSLDAGVLFLSPTPSAALLGLHAQLCELLR 157
Query: 106 T-KGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVK-LPLQGDVEHVRLVQLPP 163
GL++ + P W P C +A VP R+ +L +K LP+ G + LV++ P
Sbjct: 158 KDAGLEVPDGFRPDNWVPRCAVAIDVPRGRMAEAFCVLRDLKLLPVSGYGMDIALVEVAP 217
>gi|423397199|ref|ZP_17374400.1| hypothetical protein ICU_02893 [Bacillus cereus BAG2X1-1]
gi|401650093|gb|EJS67667.1| hypothetical protein ICU_02893 [Bacillus cereus BAG2X1-1]
Length = 186
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 47/183 (25%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL------------- 43
YAI FD ++I REL + N++ EPHITL
Sbjct: 2 YAIIATFDRVFTNEI-------RELQNELANIVGSNQLAGVEPHITLADYNELDVNVYTE 54
Query: 44 -----LVTQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHD 98
+VTQ E+I + P V FPIS ++F + LL L + + HD
Sbjct: 55 KLKDFVVTQ-----ENIASVTFPSVGTFPISETIFLAPTITDELLKLHHSYHDYFKIFHD 109
Query: 99 NLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRL 158
NL + YVPG W PHC +A + + + NV + + +E ++L
Sbjct: 110 NL-----------NSYYVPGKWVPHCTIAIGLNSSQFVNVMEYMYEKFDVTTASIEKLKL 158
Query: 159 VQL 161
+++
Sbjct: 159 IKV 161
>gi|383824893|ref|ZP_09980060.1| hypothetical protein MXEN_08662 [Mycobacterium xenopi RIVM700367]
gi|383336191|gb|EID14596.1| hypothetical protein MXEN_08662 [Mycobacterium xenopi RIVM700367]
Length = 174
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 25/172 (14%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNL---IKPEDEPHITLLV------TQPCSK 51
M A+ L FD + I + + +P+L PH++ V T +
Sbjct: 1 MALAVCLLFDRQSERAIRALWDRIEQQGVPSLRSHTHGRHVPHVSYAVLRSWDQTAVTAA 60
Query: 52 PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQI 111
E+I S P+ L V + + L+ + + A+ G ++
Sbjct: 61 LEEIAAGS-------PVELCFDGVGLFRRGRMWLVAGVGADFVARQARVVAAVTATGAEL 113
Query: 112 DKEYVPGVWFPHCMLAPSVPTDR----VGNVCNILAKVKLPLQGDVEHVRLV 159
K YVPG+W PHC LAP + VG+V ++ LPL ++ LV
Sbjct: 114 HKHYVPGIWLPHCSLAPRAMLAQLPVVVGSVLDV-----LPLHARLDRAALV 160
>gi|443672860|ref|ZP_21137939.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
gi|443414526|emb|CCQ16277.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
Length = 193
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 8/147 (5%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M + +L D L + + + + +P+ + E PHIT+ V P+ +
Sbjct: 26 MVQSAELLLDAGLDAAVRREWAALSDAELPSQNRHRGESNRPHITMAVA--SWMPDAVDD 83
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
+ D F + L V + L L+ S +L +LH ++EA+ + L P
Sbjct: 84 GAAVRFDPFQVRLGGLVVFGGRTITLARLVVPSNDLLDLHARMFEAVGERSLD---HLQP 140
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAK 144
G W PH LA + + G+ +L++
Sbjct: 141 GRWTPHVTLARRLTPEEAGDAVRLLSR 167
>gi|18405660|ref|NP_566834.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
[Arabidopsis thaliana]
gi|332643887|gb|AEE77408.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
[Arabidopsis thaliana]
Length = 168
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPC---SKPEDILPD 58
YAI+LYFD AL++++L + + I LI E PHITL T +K E I+
Sbjct: 5 YAIELYFDPALENQVLKAWNVFARRQISTYLINNESRPHITLFSTTSSIDSTKLEPIIKS 64
Query: 59 SIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPG 118
+ +S S +N L L SL+L +L L E + +G +I +EY
Sbjct: 65 FSSKQEPISLSFSSIGSFSSDDNALFLSPTPSLSLIQLQLQLCEVIKKEGFEIGEEYRVD 124
Query: 119 VWFPHCMLAPSVPTDRVG 136
W P C +A VP R+
Sbjct: 125 SWVPFCSVAVDVPKSRIS 142
>gi|363419655|ref|ZP_09307753.1| hypothetical protein AK37_03003 [Rhodococcus pyridinivorans AK37]
gi|359736762|gb|EHK85701.1| hypothetical protein AK37_03003 [Rhodococcus pyridinivorans AK37]
Length = 174
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDI-- 55
M A+ L FD I + E IP L+ PH++ V + + +
Sbjct: 1 MALAVCLLFDTETDRAIRRLWGRLEESGIPTLLTHTHRKHVPHLSYAVLRTYDRAAVVSA 60
Query: 56 ---LPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQID 112
+PD P V + +L LF + L+ A S L + D + + T G +
Sbjct: 61 LEDMPDGGP-VPVYIDTLGLF-----RRGRASLVPAPSSELVQRQDRVVRVVETTGADLH 114
Query: 113 KEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLV 159
+ YVPG W PHC L+P + + + ++ V LP++ ++ L+
Sbjct: 115 RYYVPGRWTPHCSLSPRTRREELDCLGAVVYDV-LPIEATLDRAVLI 160
>gi|423663043|ref|ZP_17638212.1| hypothetical protein IKM_03440 [Bacillus cereus VDM022]
gi|401296242|gb|EJS01861.1| hypothetical protein IKM_03440 [Bacillus cereus VDM022]
Length = 186
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL---------LVTQ 47
YAI FD KI REL + N+I EPHITL L T+
Sbjct: 2 YAIIATFDRVFTYKI-------RELQSELTNIIGTNQLAGVEPHITLADYNELDVNLYTE 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F N LL + + HDNL
Sbjct: 55 KLKEFVAFQENIAAVTFPSVGTFPTNGTIFLAPTITNELLKFHHSYHDYFKTFHDNL--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + +++ +V I K + L +E ++L+++
Sbjct: 112 --------QSYYVPGKWVPHCTIANGLNSNQFLSVMEYIYEKFDVTL-ASIEKLKLIKV 161
>gi|423408035|ref|ZP_17385184.1| hypothetical protein ICY_02720 [Bacillus cereus BAG2X1-3]
gi|401658473|gb|EJS75969.1| hypothetical protein ICY_02720 [Bacillus cereus BAG2X1-3]
Length = 186
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 47/183 (25%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL------------- 43
YAI FD ++I REL + N++ EPHITL
Sbjct: 2 YAIIATFDRVFTNEI-------RELQNELANIVGSNQLAGVEPHITLADYNELDVNVYAE 54
Query: 44 -----LVTQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHD 98
+VTQ E+I P + P V FP S ++F + LL L + + HD
Sbjct: 55 KLKDFVVTQ-----ENIAPVTFPSVGTFPTSETIFLAPTITDELLKLHHSYHDYFKIFHD 109
Query: 99 NLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRL 158
NL + YVPG W PHC +A + + + +V + + +E ++L
Sbjct: 110 NL-----------NSYYVPGKWVPHCTIAIGLNSSQFVSVMEYMYEKFDVTTASIEKLKL 158
Query: 159 VQL 161
+++
Sbjct: 159 IKV 161
>gi|414589421|tpg|DAA39992.1| TPA: hypothetical protein ZEAMMB73_430671 [Zea mays]
Length = 254
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 3 YAIKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLL-VTQPCSKPEDILPDSI 60
YA++LYFD AL++++L + L R LI PH+ LL + P
Sbjct: 52 YAVELYFDPALENQVLKAWNALARRQLGSRLIDAAARPHLPLLHLPAAALPPPGTGAGGD 111
Query: 61 PLVDKFPISLSLFSVLPR-------------------KNNLLCLLIAQSLNLRELHDNLY 101
PL+ P +L S L +N+L L S L LH L
Sbjct: 112 PLLRLAPSLRALASRLDPLALALSSLAALPASATSSPHDNVLFLAPTPSAALLGLHAQLC 171
Query: 102 EALAT-KGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVK-LPLQGDVEHVRLV 159
E L G++I + P W P C +A VP R+ +L ++K LP+ G + LV
Sbjct: 172 ELLRKDAGVEIPDPFRPDHWLPRCAVAIDVPRGRMAEAFCVLRELKLLPVSGYGMDIALV 231
Query: 160 QL 161
++
Sbjct: 232 EV 233
>gi|423459974|ref|ZP_17436771.1| hypothetical protein IEI_03114 [Bacillus cereus BAG5X2-1]
gi|401141731|gb|EJQ49282.1| hypothetical protein IEI_03114 [Bacillus cereus BAG5X2-1]
Length = 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 33/149 (22%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI++ L E I N+I EPHITL L T+
Sbjct: 2 YAIIATFDRVFTNKIIE---LQNE--ITNIIGTNQLAGVEPHITLADYNEVDVNLYTKKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E++ + P V FP + ++F + LL L N + HDNL
Sbjct: 57 DEFVAVQENMAAINFPSVGTFPTNGTIFLAPTITDELLKLHHYYHDNFKTFHDNL----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDR 134
+ YVPG W PHC +A + ++
Sbjct: 112 ------NSYYVPGKWVPHCTIANKLHANQ 134
>gi|125974104|ref|YP_001038014.1| hypothetical protein Cthe_1595 [Clostridium thermocellum ATCC
27405]
gi|125714329|gb|ABN52821.1| hypothetical protein Cthe_1595 [Clostridium thermocellum ATCC
27405]
Length = 205
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLV-----TQPC----- 49
MQYAI+LYFD+ + K+ + K V + + ++ + PH+TL + C
Sbjct: 27 MQYAIELYFDEVTEQKLFNLAKRVADEKLSTKFLEWKTRPHLTLACFNDVDEEKCIKLLK 86
Query: 50 --SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATK 107
+K +P I V F + ++F V P N+ + RELH+ L + K
Sbjct: 87 EFAKSHSRMPACIASVGMFTDTKTIF-VSPVMNSSMFQF------QRELHEYLND-FDKK 138
Query: 108 GLQIDKEYVPGVWFPHCMLA 127
G + Y P W PHC +A
Sbjct: 139 GWEW---YCPDRWVPHCTIA 155
>gi|452959924|gb|EME65254.1| hypothetical protein G352_09712 [Rhodococcus ruber BKS 20-38]
Length = 174
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK---PEDEPHITLLVTQPCSKPEDILP 57
M A+ L FD A + + + +L +P L+ PH++ V + ED+
Sbjct: 1 MALAVCLVFDAAARRALQQLWARLEDLGVPTLLTHTHGRHVPHLSYAVLR-SYDVEDVTA 59
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
L D P++L ++ + + L A + +L + + + G + K Y P
Sbjct: 60 ALATLPDGGPLTLHSDALGAFRRGRVWLSPAPTADLLRRQQRVVDTVTAVGADLHKHYRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLV 159
GVW PH L+P + + V ++ V LPL+ V L+
Sbjct: 120 GVWTPHLTLSPRARLEDLPRVAAVVYDV-LPLETVVSGAALI 160
>gi|115478887|ref|NP_001063037.1| Os09g0375400 [Oryza sativa Japonica Group]
gi|49387687|dbj|BAD26033.1| putative calmodulin-binding protein [Oryza sativa Japonica Group]
gi|113631270|dbj|BAF24951.1| Os09g0375400 [Oryza sativa Japonica Group]
gi|215769260|dbj|BAH01489.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 236
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 3 YAIKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLLVTQPCSKPE--DILPDS 59
YA++LYFD AL++++L + L R LI PH+ LL S P+ + P
Sbjct: 47 YAVELYFDPALENQVLKAWNALARRQLSSRLIDAASRPHLPLLHLPAASLPDPLRLAPSL 106
Query: 60 IPLVDKF-----PISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALAT-KGLQIDK 113
L + +S +L L S L +H L E L G+++
Sbjct: 107 RALASRLDPLPLALSSLASPPSSPDAGVLFLAPTPSAALLGIHAQLCELLRKDAGVEVPD 166
Query: 114 EYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVK-LPLQGDVEHVRLVQLPP 163
+ P W P C +A VP R+ +L ++K LP+ G + LV++ P
Sbjct: 167 VFRPDHWVPRCAVAVDVPRGRMAEAFCVLRELKLLPVSGYGMDIALVEVGP 217
>gi|386398633|ref|ZP_10083411.1| 2'-5' RNA ligase [Bradyrhizobium sp. WSM1253]
gi|385739259|gb|EIG59455.1| 2'-5' RNA ligase [Bradyrhizobium sp. WSM1253]
Length = 177
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 39 PHITLLV---TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRE 95
PHITL + P + L D+ + P+SLS P +L + + +L
Sbjct: 40 PHITLAIYPDETPLKRLHTALEDTSRNWEALPMSLSGLGAFPGNGTVLWAVPIVTRDLLA 99
Query: 96 LHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEH 155
H + AL L++D Y PG W PH L+ ++P G L P G ++
Sbjct: 100 RHQAIQTAL--PDLKVDAHYRPGAWVPHVTLSAALPDP--GPALMALLSSWEPTTGFLDR 155
Query: 156 VRLVQLPP 163
V LV+ P
Sbjct: 156 VELVRFRP 163
>gi|229172810|ref|ZP_04300365.1| hypothetical protein bcere0006_19180 [Bacillus cereus MM3]
gi|228610698|gb|EEK67965.1| hypothetical protein bcere0006_19180 [Bacillus cereus MM3]
Length = 186
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 33/149 (22%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI++ L E I N+I EPHITL L T+
Sbjct: 2 YAIIATFDRVFTNKIIE---LQNE--ITNIIGTNQLAGVEPHITLADYNEVDVNLYTKKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E++ P V FP + ++F + LL L + N + HDNL
Sbjct: 57 EEFVAVQENMAAIKFPSVGVFPTNGTIFLAPTITDELLKLHHSYHDNFKTFHDNL----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDR 134
+ YVPG W PHC +A + ++
Sbjct: 112 ------NSYYVPGKWVPHCTIANKLHANQ 134
>gi|242049114|ref|XP_002462301.1| hypothetical protein SORBIDRAFT_02g023530 [Sorghum bicolor]
gi|241925678|gb|EER98822.1| hypothetical protein SORBIDRAFT_02g023530 [Sorghum bicolor]
Length = 259
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 24/183 (13%)
Query: 3 YAIKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLLVTQPCS--KPEDILPDS 59
YA++LYFD AL++++L + L R LI PH+ LL + P
Sbjct: 56 YAVELYFDPALENQVLKAWNALARRQLGSRLIDAAARPHLPLLHLPAAALPPPGTGAAGG 115
Query: 60 IPLVDKFPISLSLFSVL-------------------PRKNNLLCLLIAQSLNLRELHDNL 100
PL+ P +L S L +N+L L S L LH L
Sbjct: 116 DPLLRLAPSLRALASRLDPLPLALSSLAALPASASSSSHDNVLFLAPTPSAALLGLHAQL 175
Query: 101 YEALAT-KGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVK-LPLQGDVEHVRL 158
E L G+++ + P W P C +A VP R+ +L ++K LP+ G + L
Sbjct: 176 CELLRKDAGVEVPDAFRPDHWLPRCAVAVDVPRGRMAEAFCVLRELKLLPVSGYGMDIAL 235
Query: 159 VQL 161
V++
Sbjct: 236 VEV 238
>gi|212721018|ref|NP_001132349.1| uncharacterized protein LOC100193792 [Zea mays]
gi|194694148|gb|ACF81158.1| unknown [Zea mays]
gi|413925947|gb|AFW65879.1| hypothetical protein ZEAMMB73_746943 [Zea mays]
gi|414885225|tpg|DAA61239.1| TPA: hypothetical protein ZEAMMB73_024169 [Zea mays]
Length = 249
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 3 YAIKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLL-VTQPCSKPEDILPDSI 60
YA++LYFD AL++++L + L R LI PH+ LL + P
Sbjct: 47 YAVELYFDPALENQVLKAWNALARRQLGSRLIDAAARPHLPLLHLPAAALPPPGTGAGGD 106
Query: 61 PLVDKFPISLSLFSVL-------------------PRKNNLLCLLIAQSLNLRELHDNLY 101
PL+ P +L S L +N+L L + L LH L
Sbjct: 107 PLLRLAPSLRALASRLDPLALALSSLAALPASASSSPHDNVLFLAPTPTAALLGLHAQLC 166
Query: 102 EALAT-KGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVK-LPLQGDVEHVRLV 159
E L G+++ + P W P C +A VP R+ +L ++K LP+ G + LV
Sbjct: 167 ELLRKDAGVEVPDAFRPDHWLPRCAVAVDVPRGRMAEAFCVLRELKLLPVSGYGMDIALV 226
Query: 160 QL 161
++
Sbjct: 227 EV 228
>gi|407275458|ref|ZP_11103928.1| hypothetical protein RhP14_03103 [Rhodococcus sp. P14]
Length = 174
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK---PEDEPHITLLVTQPCSKPEDILP 57
M A+ L FD A + + + +L +P L+ PH++ V + ED+
Sbjct: 1 MALAVCLVFDAAARRALQQLWARLEDLGVPTLLTHTHGRHVPHLSYAVLR-SYDVEDVTA 59
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
L D P++L ++ + + L A + +L + + + G + K Y P
Sbjct: 60 ALATLPDGGPLTLYSDALGAFRRGRVWLSPAPTADLLRRQQRVVDTVTAVGADLHKHYRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLV 159
GVW PH L+P + + V ++ V LPL+ V L+
Sbjct: 120 GVWTPHLTLSPRARLEDLPRVAAVVYDV-LPLETVVSGAALI 160
>gi|281418250|ref|ZP_06249270.1| conserved hypothetical protein [Clostridium thermocellum JW20]
gi|281409652|gb|EFB39910.1| conserved hypothetical protein [Clostridium thermocellum JW20]
Length = 179
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLV-----TQPC----- 49
MQYAI+LYFD+ + K+ + K V + + ++ + PH+TL + C
Sbjct: 1 MQYAIELYFDEVTEQKLFNLAKRVADEKLSTKFLEWKTRPHLTLACFNDVDEEKCIKLLK 60
Query: 50 --SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATK 107
+K +P I V F + ++F V P N+ + RELH+ L + K
Sbjct: 61 EFAKSHSRMPACIASVGMFTDTKTIF-VSPVMNSSMFQF------QRELHEYLND-FDKK 112
Query: 108 GLQIDKEYVPGVWFPHCMLA 127
G + Y P W PHC +A
Sbjct: 113 GWEW---YCPDRWVPHCTIA 129
>gi|226185922|dbj|BAH34026.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 173
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK---PEDEPHITLLVTQPC-SKPEDIL 56
M +++L D +S + +L+ + +P+ P + PHITL V + ++ +++L
Sbjct: 1 MVQSVELLLDPVSESAVRAQWQLLADAGLPSQASHHSPSNRPHITLFVAREIPAEIDELL 60
Query: 57 PDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA-LATKGLQIDKEY 115
D F + L + V K +L + S L LH + E+ + + L E
Sbjct: 61 VRRFSAPD-FEVRLGGYVVFGGKQMVLARSVVPSRALLHLHREIAESTIGSTALPAHVE- 118
Query: 116 VPGVWFPHCMLAPSVPTDRVGNVCNILA 143
PG W PH LA V R+G +L
Sbjct: 119 -PGAWTPHVTLARRVEPARLGEAIALLG 145
>gi|423524029|ref|ZP_17500502.1| hypothetical protein IGC_03412 [Bacillus cereus HuA4-10]
gi|401169872|gb|EJQ77113.1| hypothetical protein IGC_03412 [Bacillus cereus HuA4-10]
Length = 186
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL---------LVTQ 47
YAI FD KI REL + N+I+ + EPHITL L T+
Sbjct: 2 YAIIATFDRVFTYKI-------RELQSELTNIIETNELAGVEPHITLADYNELDVNLYTE 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F N LL + + HDN
Sbjct: 55 KLKEFVAFQENIAAVTFPSVGTFPTNGTIFLTPTITNELLRFHHSYHDYFKTFHDNP--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDR-VGNVCNILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + ++ +G + + K ++ + +E ++L+++
Sbjct: 112 --------KSYYVPGSWVPHCTIANQLDVNQFLGAIEYLYEKFEIT-RASIEKLKLIKV 161
>gi|453068494|ref|ZP_21971772.1| hypothetical protein G418_07675 [Rhodococcus qingshengii BKS 20-40]
gi|452765983|gb|EME24236.1| hypothetical protein G418_07675 [Rhodococcus qingshengii BKS 20-40]
Length = 191
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK---PEDEPHITLLVTQPCSKPEDILP 57
M +++L D +S + +L+ + +P+ P + PHITL V + D L
Sbjct: 19 MVQSVELLLDPMSESAVRAQWQLLADAGLPSQASHHSPSNRPHITLFVAREIPAEIDELL 78
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV- 116
F + L + V K +L + S L LH + E+ T G +V
Sbjct: 79 KRRFSAPDFEVRLGGYVVFGGKQMVLARSVIPSRALLHLHREIAES--TVGSTALPAHVE 136
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILA 143
PG W PH LA V R+G +L
Sbjct: 137 PGAWTPHVTLARRVEPARLGEAIALLG 163
>gi|423600550|ref|ZP_17576550.1| hypothetical protein III_03352 [Bacillus cereus VD078]
gi|401232589|gb|EJR39088.1| hypothetical protein III_03352 [Bacillus cereus VD078]
Length = 186
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPE----DEPHITL---------LVTQPC 49
YAI FD +KI KL EL N+I EPHITL L T+
Sbjct: 2 YAIIATFDCVFANKI---RKLQNEL--TNIIGTNPLAGVEPHITLADYNELDVNLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+I + P V FP + ++F N LL + + HDNL
Sbjct: 57 EEFVVFQENIAAVTFPSVGTFPTNGTIFLAPTITNELLKFHHSYHDYFKTFHDNL----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + +++ +V + + +E ++L+++
Sbjct: 112 ------QSYYVPGKWVPHCTIANGLNSNQFLSVMEYIYEKFDVTIASIEKLKLIKV 161
>gi|423610479|ref|ZP_17586340.1| hypothetical protein IIM_01194 [Bacillus cereus VD107]
gi|401249796|gb|EJR56102.1| hypothetical protein IIM_01194 [Bacillus cereus VD107]
Length = 186
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 33/177 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL NLI EPHIT+ +
Sbjct: 2 YAIIATFDSVFTNKITE---LQNEL--ANLIGTNQLAGVEPHITIADYNELDVNLYIEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ + E++ + P V FP + ++F + LL L + + HDNL
Sbjct: 57 KEFVAIQENMAAVTFPSVGTFPTNGTIFLAPTITDELLRLHHSYHNYFKTFHDNL----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLP 162
+ YVPG W PHC +A + +++ +V + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANELNSNQFISVMEYIYEKFDLTTTSIEKLKLIKVS 162
>gi|145224210|ref|YP_001134888.1| hypothetical protein Mflv_3626 [Mycobacterium gilvum PYR-GCK]
gi|145216696|gb|ABP46100.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length = 182
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M ++++L FDD ++ + + + + + I +L E PH+T+ V+ + D+
Sbjct: 9 MVHSVELLFDDDTEAAVRGAWEDLAQAGIRSLAAHTAESNRPHVTVSVSDELTG--DVDA 66
Query: 58 DSIPLVDKFPISLSLFSVL---PRKNNLLCLLIAQSLNLRELHDNLYEA---LATKGLQI 111
P++D+ P+ L + L + L L+ S L +LH ++ +KG
Sbjct: 67 ALRPVLDRLPLRCVLGAPLLFGAGRGVTLVRLVVPSAELLDLHAEVHRICLPYMSKGSL- 125
Query: 112 DKEYVPGVWFPHCMLAPSVPTDRV 135
VPG W PH LA VP+DR+
Sbjct: 126 -PHSVPGQWTPHVTLARRVPSDRL 148
>gi|315444544|ref|YP_004077423.1| hypothetical protein Mspyr1_29690 [Mycobacterium gilvum Spyr1]
gi|315262847|gb|ADT99588.1| hypothetical protein Mspyr1_29690 [Mycobacterium gilvum Spyr1]
Length = 174
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILP 57
M ++++L FDD ++ + + + + + I +L E PH+T+ V+ + D+
Sbjct: 1 MVHSVELLFDDDTEAAVRGAWEDLAQAGIRSLAAHTAESNRPHVTVSVSDELTG--DVDA 58
Query: 58 DSIPLVDKFPISLSLFSVL---PRKNNLLCLLIAQSLNLRELHDNLYEA---LATKGLQI 111
P++D+ P+ L + L + L L+ S L +LH ++ +KG
Sbjct: 59 ALRPVLDRLPLRCVLGAPLLFGAGRGVTLVRLVVPSAELLDLHAEVHRICLPYMSKGSL- 117
Query: 112 DKEYVPGVWFPHCMLAPSVPTDRV 135
VPG W PH LA VP+DR+
Sbjct: 118 -PHSVPGQWTPHVTLARRVPSDRL 140
>gi|443290071|ref|ZP_21029165.1| Conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
gi|385886983|emb|CCH17239.1| Conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
Length = 171
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 20/142 (14%)
Query: 1 MQYAIKLYFD-----------DALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPC 49
M A++LY D DAL+++ + SM+ +L++ PH++L V P
Sbjct: 1 MVAALELYLDPDATRRIRVLWDALEAEGVQSMR--------SLLEQRHRPHLSLAVA-PR 51
Query: 50 SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGL 109
PE + V P+ L +L L + L H ++ LA G+
Sbjct: 52 FDPEQVAEALRGTVVAAPLQLDFQHAGQFVGRVLWLGPTPTPELLAHHRLVHGLLADAGI 111
Query: 110 QIDKEYVPGVWFPHCMLAPSVP 131
+ Y PG W PHC L+ VP
Sbjct: 112 TLAGHYQPGRWVPHCTLSMRVP 133
>gi|47566861|ref|ZP_00237579.1| conserved hypothetical protein protein [Bacillus cereus G9241]
gi|47556490|gb|EAL14823.1| conserved hypothetical protein protein [Bacillus cereus G9241]
Length = 186
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGVEPHITLADYNELNVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ + E++ P + P V FP + ++F + LL + + + HDN
Sbjct: 57 GEFVAIQENMDPVTFPSVGTFPTNGTVFLAPTVTDELLKIHHSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A V ++ NV + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWIPHCTIANRVNINQFLNVMGYVYEKFDFTTASIEKLKLIKV 161
>gi|374296058|ref|YP_005046249.1| 2'-5' RNA ligase [Clostridium clariflavum DSM 19732]
gi|359825552|gb|AEV68325.1| 2'-5' RNA ligase [Clostridium clariflavum DSM 19732]
Length = 179
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLV-----TQPC----- 49
MQYAI+LYFD + K+ + K + + + ++ + PH+TL + C
Sbjct: 1 MQYAIELYFDKVTEQKLFNLAKRIADEKLSTKFLEWKTRPHLTLACFNDVDEEKCIKLLI 60
Query: 50 --SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATK 107
+K +P I V F + ++F V P N+ + RELH+ L + K
Sbjct: 61 EFAKSHKRMPACIASVGMFTDTKTIF-VSPVMNSSMFQF------QRELHEYLND-FDKK 112
Query: 108 GLQIDKEYVPGVWFPHCMLA 127
G + Y P W PHC +A
Sbjct: 113 GWEW---YCPDCWVPHCTIA 129
>gi|296164453|ref|ZP_06847026.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295900187|gb|EFG79620.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 169
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
M ++I+L FD ++ I + IP+ P PH+TL V + D
Sbjct: 1 MVHSIELLFDAETEATIRGLWDALAGAGIPSQ-APAGRPHVTLAVADRIAGEADAALR-- 57
Query: 61 PLVDKFPISLSLFS--VLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKE---- 114
PL ++ P+ ++ +L R N +L LI + L + H ++ G +D
Sbjct: 58 PLTERLPLGCAVGGSLLLGRSNAILARLIVPTAQLLDFHAEVHRLC---GEHLDPAPAPT 114
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAK 144
+PG W PH LA V + I +
Sbjct: 115 SLPGQWTPHVTLARRVGGPALSRALRIAGR 144
>gi|118469675|ref|YP_889475.1| hypothetical protein MSMEG_5229 [Mycobacterium smegmatis str. MC2
155]
gi|399989481|ref|YP_006569831.1| hypothetical protein MSMEI_5092 [Mycobacterium smegmatis str. MC2
155]
gi|118170962|gb|ABK71858.1| hypothetical protein MSMEG_5229 [Mycobacterium smegmatis str. MC2
155]
gi|399234043|gb|AFP41536.1| hypothetical protein MSMEI_5092 [Mycobacterium smegmatis str. MC2
155]
Length = 174
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 68 ISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLA 127
+ LS V + + L+ S ++ + + + + G + K Y PGVW PHC LA
Sbjct: 70 VELSFDGVGVFRRGRIWLVAGVSADVAQRQQRVVDLVTATGADLHKHYRPGVWLPHCSLA 129
Query: 128 PSVPTDRVGNVCNILAKVKLPLQGDVEHVRLV 159
P ++ +V + V LPL+ ++H LV
Sbjct: 130 PRATLAQLPDVVATVMDV-LPLRVTLDHAALV 160
>gi|333918476|ref|YP_004492057.1| hypothetical protein AS9A_0805 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480697|gb|AEF39257.1| hypothetical protein AS9A_0805 [Amycolicicoccus subflavus DQS3-9A1]
Length = 174
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIK---PEDEPHITLLVT--QPCSKPEDI 55
M A+ L FD A + + + V +L +P L+ + PH++ +V + E
Sbjct: 1 MALAVCLLFDAASERTVRTLWRRVEDLGVPTLLSHTHKQHHPHLSYVVMLEWDFTNVERA 60
Query: 56 LPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNL--RELHDNLYEALATKGLQIDK 113
L P + P +L +V + +CL+ A + +L R+LH +A + G + K
Sbjct: 61 LAAIEP---RGPFTLWFDAVGVLRRGRVCLMPAPTADLASRQLHA--LDAAESAGALVHK 115
Query: 114 EYVPGVWFPHCMLAPSVPTDRVGNVCNILAKV 145
Y G W PH +A +V +V + L V
Sbjct: 116 HYARGRWLPHLSIATRATRAQVPDVSHALFDV 147
>gi|229161091|ref|ZP_04289079.1| hypothetical protein bcere0009_18800 [Bacillus cereus R309803]
gi|228622450|gb|EEK79288.1| hypothetical protein bcere0009_18800 [Bacillus cereus R309803]
Length = 186
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL------VTQPCSK- 51
YA+ FD +KI L EL N+I EPHITL VT K
Sbjct: 2 YAMIATFDGVFANKI---RALQNEL--TNIIGTNQLAGVEPHITLADYNELDVTVYIEKL 56
Query: 52 ------PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
E++ P + FP + ++F + +L + + HDNL
Sbjct: 57 KEFVAIQENLATIDFPSIGTFPTNGTIFLAPTTTDEMLRFHYSCHDYFKTFHDNL----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A V T++ +V + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWIPHCTIANRVNTNQFLSVMEYVYEKFDFATASIEKLKLIKV 161
>gi|306521489|ref|ZP_07407836.1| hypothetical protein CdifQ_18386 [Clostridium difficile QCD-32g58]
Length = 152
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 24/140 (17%)
Query: 1 MQYAIKLYFDDALKSKILD-SMKLVRELNIPNLIKPEDEPHITLL----VTQPC------ 49
MQYAI+LY+D + ++ D S K+ E ++ + PH+TL V + C
Sbjct: 1 MQYAIELYYDKKTEKQLFDLSKKIADEKISTKYLEWKTRPHLTLACFNDVDEACCIDKLK 60
Query: 50 --SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATK 107
++ ++P I V F + ++F V P N+ ++ + LYE L
Sbjct: 61 GFAQNHKVIPAYIGSVGMFNDTKTVF-VSPIMNS----------SMYQFQRELYEVLQDF 109
Query: 108 GLQIDKEYVPGVWFPHCMLA 127
+ Y P W PHC +A
Sbjct: 110 DSNGWEWYHPNRWVPHCTIA 129
>gi|441510772|ref|ZP_20992674.1| hypothetical protein GOACH_27_00200 [Gordonia aichiensis NBRC
108223]
gi|441445108|dbj|GAC50635.1| hypothetical protein GOACH_27_00200 [Gordonia aichiensis NBRC
108223]
Length = 200
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 31/176 (17%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNL---IKPEDEPHITLLVTQPCSKPEDILP 57
M ++++ FDD + ++ + N+P+ + PH+T+ Q + D
Sbjct: 1 MAHSVEFLFDDESERRLRSLWDALLASNLPSAGTNSSATNRPHVTIAAAQRITSAADT-- 58
Query: 58 DSIPLVD-KFPISLSLFS--VLPRKNNLL-CLLIAQSLNLRELHDNLYEALATKGLQID- 112
+I VD + PI +++ S V + L+ LL+ + +L H + +AL +
Sbjct: 59 -AIRHVDVRLPIRVTVGSPIVFGHGDRLVVALLVIPTTHLLAAHAAVVDALVGHSSVVGH 117
Query: 113 -----------------KEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQG 151
+ +PG W PH +A V ++++G+V N L++ P +G
Sbjct: 118 SSAVGHSSVGSDEPGVFEHSLPGSWTPHVTMARRVHSEQLGDVVNTLSR---PTEG 170
>gi|220911124|ref|YP_002486433.1| hypothetical protein Achl_0344 [Arthrobacter chlorophenolicus A6]
gi|219858002|gb|ACL38344.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
Length = 163
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 19/162 (11%)
Query: 4 AIKLYFDDALKSKILDSMKLVRELNIPNL---IKPEDEPHITLLVTQPCSKPEDILPDSI 60
+I+L FDD +S + + E +P+L + PH+TL + E +P
Sbjct: 3 SIELVFDDDTESAVRADWVRLAEAGLPSLAGHTGASNRPHLTL-----AAGAELFVPPLH 57
Query: 61 PLVDKFPISLSLFSV----LPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
P+S+ V R +L + + LR++H L+ + Q +
Sbjct: 58 AFEGALPLSVDFSGVQVFAAGRDKYVLARSVVLTTPLRKVHQRLHREIGGAVPQT----L 113
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRL 158
PG W PH LA + +++G ++L L L G + RL
Sbjct: 114 PGAWTPHVTLARRLTGEQLGKAMDLL---DLRLGGTIVAARL 152
>gi|229011416|ref|ZP_04168607.1| hypothetical protein bmyco0001_18660 [Bacillus mycoides DSM 2048]
gi|423487227|ref|ZP_17463909.1| hypothetical protein IEU_01850 [Bacillus cereus BtB2-4]
gi|423492951|ref|ZP_17469595.1| hypothetical protein IEW_01849 [Bacillus cereus CER057]
gi|423500257|ref|ZP_17476874.1| hypothetical protein IEY_03484 [Bacillus cereus CER074]
gi|228749933|gb|EEL99767.1| hypothetical protein bmyco0001_18660 [Bacillus mycoides DSM 2048]
gi|401155261|gb|EJQ62672.1| hypothetical protein IEY_03484 [Bacillus cereus CER074]
gi|401156435|gb|EJQ63842.1| hypothetical protein IEW_01849 [Bacillus cereus CER057]
gi|402439104|gb|EJV71113.1| hypothetical protein IEU_01850 [Bacillus cereus BtB2-4]
Length = 186
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPE----DEPHITL---------LVTQ 47
YAI FD +KI REL + N+I EPHITL L T+
Sbjct: 2 YAIIATFDCVFTNKI-------RELQNELTNIIGTNPLAGVEPHITLADYNELDVNLYTE 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F + LL L + + HDNL
Sbjct: 55 KLEEFVVFQENIAAVTFPSVGTFPTNRTIFLAPTITDELLRLHHSYHDYFKVFHDNL--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + +++ +V I K + L +E ++L+++
Sbjct: 112 --------QSYYVPGKWVPHCTIANGLNSNQFLSVMEYIYEKFDVTL-ASIEKLKLIKV 161
>gi|423617724|ref|ZP_17593558.1| hypothetical protein IIO_03050 [Bacillus cereus VD115]
gi|401254489|gb|EJR60716.1| hypothetical protein IIO_03050 [Bacillus cereus VD115]
Length = 186
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 59/142 (41%), Gaps = 33/142 (23%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQP- 48
YAI FD +KI++ L EL N+I EPHITL L T+
Sbjct: 2 YAIIATFDSVFTNKIIE---LQNEL--TNIIGTNQLAGVEPHITLADYHELDVNLYTKKL 56
Query: 49 ---CSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+I + V FPI+ ++F + LL L + + + HDN
Sbjct: 57 EGFVAIQENIAAVTFSSVGTFPINGTVFLAPTITDELLTLHHSYHDHFKIFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLA 127
+ YVPG W PHC +A
Sbjct: 112 ------NSYYVPGKWVPHCTMA 127
>gi|363423031|ref|ZP_09311102.1| hypothetical protein AK37_20479 [Rhodococcus pyridinivorans AK37]
gi|359732172|gb|EHK81192.1| hypothetical protein AK37_20479 [Rhodococcus pyridinivorans AK37]
Length = 172
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 6/161 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPC-SKPEDIL 56
M +++L D L + + D + + + + + E PH+TL V + ED L
Sbjct: 1 MVQSVELLLDAPLDTAVRDEWTRLLDAGLYSQGRVRSESNRPHVTLFVAHALPDELEDAL 60
Query: 57 PDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
+I V + + L + + L + S+ L EL ++E L ++ I
Sbjct: 61 RATIT-VRRITLRLGGVVIFGGRYATLARTVVPSIELLELQARVFEVL-SECPGIPAHIR 118
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVR 157
PG W PH LA VP R+G + L G VR
Sbjct: 119 PGEWTPHVTLARRVPAARIGTAVLAAQTPERQLTGSSAGVR 159
>gi|254976774|ref|ZP_05273246.1| hypothetical protein CdifQC_15738 [Clostridium difficile QCD-66c26]
gi|255094160|ref|ZP_05323638.1| hypothetical protein CdifC_16081 [Clostridium difficile CIP 107932]
gi|255102328|ref|ZP_05331305.1| hypothetical protein CdifQCD-6_16036 [Clostridium difficile
QCD-63q42]
gi|255315912|ref|ZP_05357495.1| hypothetical protein CdifQCD-7_16219 [Clostridium difficile
QCD-76w55]
gi|255518571|ref|ZP_05386247.1| hypothetical protein CdifQCD-_15738 [Clostridium difficile
QCD-97b34]
gi|255651691|ref|ZP_05398593.1| hypothetical protein CdifQCD_16003 [Clostridium difficile
QCD-37x79]
gi|260684724|ref|YP_003216009.1| hypothetical protein CD196_2995 [Clostridium difficile CD196]
gi|260688382|ref|YP_003219516.1| hypothetical protein CDR20291_3041 [Clostridium difficile R20291]
gi|384362392|ref|YP_006200244.1| hypothetical protein CDBI1_15560 [Clostridium difficile BI1]
gi|423081856|ref|ZP_17070454.1| hypothetical protein HMPREF1122_01440 [Clostridium difficile
002-P50-2011]
gi|423084715|ref|ZP_17073214.1| hypothetical protein HMPREF1123_00356 [Clostridium difficile
050-P50-2011]
gi|260210887|emb|CBA66057.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214399|emb|CBE06811.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|357549663|gb|EHJ31504.1| hypothetical protein HMPREF1122_01440 [Clostridium difficile
002-P50-2011]
gi|357552041|gb|EHJ33819.1| hypothetical protein HMPREF1123_00356 [Clostridium difficile
050-P50-2011]
Length = 179
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 1 MQYAIKLYFDDALKSKILD-SMKLVRELNIPNLIKPEDEPHITLL----VTQPC------ 49
MQYAI+LY+D + ++ D S K+ E ++ + PH+TL V + C
Sbjct: 1 MQYAIELYYDKKTEKQLFDLSKKIADEKISTKYLEWKTRPHLTLACFNDVDEACCIDKLK 60
Query: 50 --SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATK 107
++ ++P I V F + ++F V P N+ ++ + LYE L
Sbjct: 61 GFAQNHKVIPAYIGSVGMFNDTKTVF-VSPIMNS----------SMYQFQRELYEVLQDF 109
Query: 108 GLQIDKEYVPGVWFPHCMLAPSV--PTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ Y P W PHC +A + ++ ++L + + G+ + LV++
Sbjct: 110 DSNGWEWYHPNRWVPHCTIALTGDDESEAFFRASDVLLREFKKISGEFVSIGLVKI 165
>gi|407984749|ref|ZP_11165357.1| 2'-5' RNA ligase superfamily protein [Mycobacterium hassiacum DSM
44199]
gi|407373584|gb|EKF22592.1| 2'-5' RNA ligase superfamily protein [Mycobacterium hassiacum DSM
44199]
Length = 174
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNL---IKPEDEPHITLLVTQPCSKPEDILP 57
M A+ L FD + + + E + +L PH++ V + +D +
Sbjct: 1 MALAVCLLFDRRSERAVRALWHRLEEAGVASLRSHTHGRHLPHLSYAVLRRWD--DDAVA 58
Query: 58 DSIP-LVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
++ L P+ LS + + + L+ +L + EA+ G + + Y
Sbjct: 59 AALEDLQCGAPVELSFDGMGLFRRGRVWLVAGVGADLAARQQRVVEAVTATGADLHQHYR 118
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLV 159
PGVW PHC LAP ++ +V + V LPL ++ LV
Sbjct: 119 PGVWIPHCSLAPRATLAQLPDVAAAVMDV-LPLPARLDRAALV 160
>gi|423414220|ref|ZP_17391340.1| hypothetical protein IE1_03524 [Bacillus cereus BAG3O-2]
gi|423429995|ref|ZP_17406999.1| hypothetical protein IE7_01811 [Bacillus cereus BAG4O-1]
gi|401098364|gb|EJQ06378.1| hypothetical protein IE1_03524 [Bacillus cereus BAG3O-2]
gi|401121191|gb|EJQ28985.1| hypothetical protein IE7_01811 [Bacillus cereus BAG4O-1]
Length = 186
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI + L EL N+I EPHITL L T+
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNVIGTNQLAGVEPHITLADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E++ + P V FP + ++F N LL L + + HDN
Sbjct: 57 GEFVAIQENMDAVTFPSVGIFPTNGTVFLAPTVTNELLKLHHSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V + + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTKQFLSVMEYIYEKFDFVTASIEKLKLIKV 161
>gi|404419367|ref|ZP_11001126.1| hypothetical protein MFORT_03201 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403661230|gb|EJZ15757.1| hypothetical protein MFORT_03201 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 172
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
M ++++L FD ++ + +R+ +IP+ P PH TL+V Q D +
Sbjct: 1 MVHSVELVFDPDTEATVRRIWDALRDADIPSQ-APASRPHATLVVAQRIDAQADAV--LA 57
Query: 61 PLVDKFPISLSLFSVL--PRKNNLLCLLIAQSLNLRELHDNLYE-ALATKGLQIDKEYVP 117
L D+FP+ L + L R +L L+ + L E+ + Y L P
Sbjct: 58 HLADRFPVPCCLGATLIFGRSAGVLTRLLVPTDELLEIQADTYRLCLPFMDPAPMPHAEP 117
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAK 144
G W PH LA V R+ I +
Sbjct: 118 GNWTPHVTLARRVAPARLATAVRIAGR 144
>gi|325840218|ref|ZP_08166985.1| hypothetical protein HMPREF9402_1556 [Turicibacter sp. HGF1]
gi|325490366|gb|EGC92691.1| hypothetical protein HMPREF9402_1556 [Turicibacter sp. HGF1]
Length = 189
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Query: 2 QYAIKLYFDDALKSKILDSMKLVRELNIPN--LIKPEDEPHITLLVTQP--CSKPEDILP 57
+YA+ YFD + K+ + + EL I + +I PHITL Q K ++
Sbjct: 4 EYAVLAYFDFETEVKLKQFWRELYELGITDYGVIPKNRRPHITLADYQDIDVEKLSLMIE 63
Query: 58 DSIPLVDKFPISL-SLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
+ I L +L S + RK +L L + L +LH N +EA + Y+
Sbjct: 64 QYFTHQAQVTIQLNTLGSFIGRK--MLYLAPTMTKELLDLHGNYHEAFEQFNQNPNSYYL 121
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPPN 164
P W PHC +A + + + K +Q + + LV++ N
Sbjct: 122 PQRWVPHCSVAGHLTEETLLQAFEYCQKNISCIQATIMEIGLVEVFFN 169
>gi|228985213|ref|ZP_04145378.1| hypothetical protein bthur0001_19120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774508|gb|EEM22909.1| hypothetical protein bthur0001_19120 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 186
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGAEPHITLADYNELNVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+ P + P V FP + ++F + LL + HDNL
Sbjct: 57 GEFVVMQENTDPVTFPSVGVFPTNGTVFLAPTVTDALLKFHHSYHDYFNNFHDNL----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T++ +V + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTNQFLSVMEYIYERFDFATASIEKLKLIKV 161
>gi|441214415|ref|ZP_20976125.1| hypothetical protein D806_5294 [Mycobacterium smegmatis MKD8]
gi|440625262|gb|ELQ87113.1| hypothetical protein D806_5294 [Mycobacterium smegmatis MKD8]
Length = 174
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 79 KNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNV 138
+ + L+ S ++ + + + + G + K Y PGVW PHC LAP ++ +V
Sbjct: 81 RRGRIWLVAGVSADVAQRQQRVVDLVTATGADLHKHYRPGVWLPHCSLAPRATLAQLPDV 140
Query: 139 CNILAKVKLPLQGDVEHVRLV 159
+ V LPL+ ++H LV
Sbjct: 141 VATVMDV-LPLRVTLDHAALV 160
>gi|229079285|ref|ZP_04211830.1| hypothetical protein bcere0023_19410 [Bacillus cereus Rock4-2]
gi|228704035|gb|EEL56476.1| hypothetical protein bcere0023_19410 [Bacillus cereus Rock4-2]
Length = 186
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI + L EL N+I EPHITL L T+
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNVIGTNQLAGVEPHITLADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E++ + P V FP + ++F N LL L + + HDN
Sbjct: 57 GEFVAIQENMDAVTFPSVGIFPTNGTVFLAPTVTNELLKLHHSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTKQFLSVMEYIYGKFDFVTASIEKLKLIKV 161
>gi|423587460|ref|ZP_17563547.1| hypothetical protein IIE_02872 [Bacillus cereus VD045]
gi|401227197|gb|EJR33726.1| hypothetical protein IIE_02872 [Bacillus cereus VD045]
Length = 186
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 35/177 (19%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD KI + L EL N+I EPHIT+ L T+
Sbjct: 2 YAIIATFDRVFTHKITE---LQNEL--TNVIGTNQLAGVEPHITIADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+I + P V FP ++++F + LL L + + HDN
Sbjct: 57 GEFVAIQENIDAVTFPSVGIFPTNVTVFLAPTVTDELLKLHYSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V I K +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTKQFLSVMEYIYGKFNFA-TASIEKLKLIKV 161
>gi|149179936|ref|ZP_01858441.1| hypothetical protein BSG1_02935 [Bacillus sp. SG-1]
gi|148852128|gb|EDL66273.1| hypothetical protein BSG1_02935 [Bacillus sp. SG-1]
Length = 187
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE-----PHITLLVTQPCSKPEDILP 57
Y I FD+ + I ++ +EL +L E+E PHIT+ K D+
Sbjct: 2 YWIAALFDEKTEKLI---KQIWKELAQESLSFYEEEIKNPRPHITIASYSEIDK--DVYI 56
Query: 58 DSIPLVDKFPISLSL-FSVLPRKNNLLCLLIAQSLN--LRELHDNLYEALATKGLQIDKE 114
D + + + + + F+ L N L + ++ L +LH + +E + +
Sbjct: 57 DGLKKLYENKTEMEICFNTLGSFLNYGTLFFSPTMTKELLDLHASHHETF-NNNVTSNSL 115
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPPN 164
Y PG W PHC LA +P + + V K ++G + + L+++ N
Sbjct: 116 YEPGKWIPHCTLANKLPEEDLAKVFRYCLKRNDSIKGRITEIALIEMADN 165
>gi|441209067|ref|ZP_20974063.1| hypothetical protein D806_3240 [Mycobacterium smegmatis MKD8]
gi|440627389|gb|ELQ89206.1| hypothetical protein D806_3240 [Mycobacterium smegmatis MKD8]
Length = 169
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPC-SKPEDILPDS 59
M ++++L FD ++ + +R+ IP+ P PH TL V Q ++ E IL
Sbjct: 1 MVHSVELVFDAETEATVRAIWDELRDAGIPSQ-APASRPHATLTVAQHIDAEVEQIL--- 56
Query: 60 IPLVDKFPISLSLFSVL--PRKNNLLCLLIAQSLNLRELHDNLYEA---LATKGLQIDKE 114
P+ + P+ L + L R +L L+ S +L ++ ++ A L T E
Sbjct: 57 RPVAARLPLPCRLGATLIFGRSAGVLARLLVPSPDLLDVQAQVHRACVPLMTPAPMPHSE 116
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAK 144
PG W PH LA V R+ I +
Sbjct: 117 --PGQWTPHVTLARRVAPTRLATALRIAGR 144
>gi|229155704|ref|ZP_04283810.1| hypothetical protein bcere0010_18960 [Bacillus cereus ATCC 4342]
gi|228627690|gb|EEK84411.1| hypothetical protein bcere0010_18960 [Bacillus cereus ATCC 4342]
Length = 186
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGAEPHITLADYNELNVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+ P + P V FP + ++F LL + + + HDN
Sbjct: 57 GEFVVMQENTDPVTFPSVGVFPTNGTVFLAPTVTGELLKIHHSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A V ++ NV + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWIPHCTIANRVNINQFLNVMGYVYEKFDFTTASIEKLKLIKV 161
>gi|206972047|ref|ZP_03232995.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|229150339|ref|ZP_04278557.1| hypothetical protein bcere0011_18910 [Bacillus cereus m1550]
gi|206732970|gb|EDZ50144.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|228633148|gb|EEK89759.1| hypothetical protein bcere0011_18910 [Bacillus cereus m1550]
Length = 186
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 35/177 (19%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI + L EL N+I EPHIT+ L T+
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNVIGTNQLAGVEPHITIADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
K E++ + P V FP + ++F + LL L + + HDN
Sbjct: 57 GKFVAIQENMDAVTFPSVGIFPTNGTVFLAPTVTDELLKLHYSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V I K +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTKQFLSVMEYIYGKFDFA-TASIEKLKLIKM 161
>gi|125563502|gb|EAZ08882.1| hypothetical protein OsI_31145 [Oryza sativa Indica Group]
Length = 207
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 5 IKLYFDDALKSKILDSM-KLVRELNIPNLIKPEDEPHITLLVTQPCSKPE--DILPDSIP 61
++LYFD AL++++L + L R LI PH+ LL S P+ + P
Sbjct: 20 VELYFDPALENQVLKAWNALARRQLSSRLIDAASRPHLPLLHLPAASLPDPLRLAPSLRA 79
Query: 62 LVDKF-----PISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALAT-KGLQIDKEY 115
L + +S +L L S L +H L E L G+++ +
Sbjct: 80 LASRLDPLPLALSSLASPPSSLDAGVLFLAPTPSAALLGIHAQLCELLRKDAGVEVPDVF 139
Query: 116 VPGVWFPHCMLAPSVPTDRVGNVCNILAKVK-LPLQGDVEHVRLVQLPP 163
P W P C +A VP R+ +L ++K LP+ G + LV++ P
Sbjct: 140 RPDHWVPRCAVAVDVPRGRMAEAFCVLRELKLLPVSGYGMDIALVEVGP 188
>gi|218235401|ref|YP_002366797.1| group-specific protein [Bacillus cereus B4264]
gi|218163358|gb|ACK63350.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 186
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 35/177 (19%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD KI + L EL N+I EPHIT+ L T+
Sbjct: 2 YAIIATFDRVFTHKITE---LQNEL--TNVIGTNQLAGVEPHITIADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+I + P V FP + ++F + LL L + + HDN
Sbjct: 57 GEFVAIQENIDAVTFPSVGIFPTNGTVFLAPTVTDELLKLHYSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V I K +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTKQFLSVMEYIYGKFNFA-TASIEKLKLIKM 161
>gi|423606118|ref|ZP_17582011.1| hypothetical protein IIK_02699 [Bacillus cereus VD102]
gi|401242209|gb|EJR48585.1| hypothetical protein IIK_02699 [Bacillus cereus VD102]
Length = 186
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGAEPHITLADYNELNVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ + E++ P + P + FP + ++F + LL + HDN
Sbjct: 57 GEFVAIQENMDPVTFPSIGTFPTNGTVFLAPTVTDALLKFHHSYHDYFNNFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T++ +V + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTNQFLSVMEYIYEKFDHATASIEKLKLIKV 161
>gi|375142279|ref|YP_005002928.1| hypothetical protein [Mycobacterium rhodesiae NBB3]
gi|359822900|gb|AEV75713.1| hypothetical protein MycrhN_5238 [Mycobacterium rhodesiae NBB3]
Length = 173
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 1 MQYAIKLYFD---DALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILP 57
M ++++L FD +A +I D + + P + PH+TL V + D
Sbjct: 2 MVHSVELLFDADTEAAIRRIWDDLADTGVRSQAGHKAPSNRPHVTLAVAETMDTAVD--- 58
Query: 58 DSI-PLVDKFPISLSLFS--VLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKE 114
D++ PL+ + PI+ ++ + + R+ L LI S+ L L ++++A Q
Sbjct: 59 DALRPLLRQLPITCTVGAPMLFGRRQFTLVRLIVPSVPLLSLQADIHDACLPHAPQGPLP 118
Query: 115 YV-PGVWFPHCMLAPSVPTDRVGNVCNI 141
+ PG W PH LA VP +++ + +
Sbjct: 119 HSQPGQWTPHVTLARRVPAEQLQSALTV 146
>gi|229059784|ref|ZP_04197161.1| hypothetical protein bcere0026_18920 [Bacillus cereus AH603]
gi|228719613|gb|EEL71214.1| hypothetical protein bcere0026_18920 [Bacillus cereus AH603]
Length = 186
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL---------LVTQ 47
YAI FD +K VREL + N+I+ + EPHITL L T+
Sbjct: 2 YAIIATFDCVSTNK-------VRELQNELTNIIETNELAGVEPHITLADYKELDINLYTK 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F + LL L + + HDNL
Sbjct: 55 RLEEFVAFQENISTVTFPSVGTFPTNGTIFLAPTITDELLRLHHSYHDYFKVFHDNL--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + ++ +V I K + L +E ++L+++
Sbjct: 112 --------QSYYVPGKWVPHCTIANGLNLNQFLSVMECIYEKFDVTL-ASIEKLKLIKV 161
>gi|229166981|ref|ZP_04294728.1| hypothetical protein bcere0007_19490 [Bacillus cereus AH621]
gi|423593940|ref|ZP_17569971.1| hypothetical protein IIG_02808 [Bacillus cereus VD048]
gi|228616609|gb|EEK73687.1| hypothetical protein bcere0007_19490 [Bacillus cereus AH621]
gi|401224741|gb|EJR31293.1| hypothetical protein IIG_02808 [Bacillus cereus VD048]
Length = 186
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL---------LVTQ 47
YAI FD +K VREL + N+I+ + EPHITL L T+
Sbjct: 2 YAIIATFDCVSTNK-------VRELQNELTNIIETNELAGVEPHITLADYKELDINLYTK 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F + LL L + + HDNL
Sbjct: 55 RLEEFVAFQENISTVTFPSVGTFPTNGTIFLAPTITDELLRLHHSYHDYFKVFHDNL--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + ++ +V I K + L +E ++L+++
Sbjct: 112 --------QSYYVPGKWVPHCTIANGLNLNQFLSVMECIYEKFDVTL-ASIEKLKLIKV 161
>gi|228962884|ref|ZP_04124127.1| hypothetical protein bthur0005_61270 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|423627163|ref|ZP_17602912.1| hypothetical protein IK5_00015 [Bacillus cereus VD154]
gi|228796814|gb|EEM44181.1| hypothetical protein bthur0005_61270 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|401272842|gb|EJR78832.1| hypothetical protein IK5_00015 [Bacillus cereus VD154]
Length = 186
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD KI + L EL N+I EPHITL L T+
Sbjct: 2 YAIIATFDRVFTHKITE---LQNEL--TNVIGTNQLAGVEPHITLADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E++ + P V FP + ++F N LL L + + HDN
Sbjct: 57 EEFIAIQENMDVVTFPSVGIFPTNGTVFLAPTVTNELLKLHHSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V + + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLQTKQFLSVMKYIYEKFDFVTASIEKLKLIKV 161
>gi|291435249|ref|ZP_06574639.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291338144|gb|EFE65100.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 176
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
Query: 5 IKLYFDDALKSKILDSMKLVRELNIPNLIK---PEDEPHITLLVTQ--PCSKPEDI---L 56
++L D A + + + + + +P+L + P + PH+TL + S E++ L
Sbjct: 1 MELLPDTATELHVREMWRRMAAAGLPSLAEHRHPTNRPHLTLATCEDLRSSAREEVAALL 60
Query: 57 PDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
D +P+ P L + +L + L ELH +++ L + +++ +
Sbjct: 61 GDGLPV----PFRLDGLLHFAGRTRVLAWRVVADAELVELHRRVWDVLVSTAGRLNPLHA 116
Query: 117 PGVWFPHCMLAPSVPTD 133
PG W PH LA S T
Sbjct: 117 PGRWVPHLTLARSRRTS 133
>gi|373486207|ref|ZP_09576883.1| hypothetical protein HolfoDRAFT_2955 [Holophaga foetida DSM 6591]
gi|372012112|gb|EHP12690.1| hypothetical protein HolfoDRAFT_2955 [Holophaga foetida DSM 6591]
Length = 211
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 23 LVRELNIPNLIKPEDEPHITLLVTQPCSKPE--DILPDSIPLVDKFPISLSLFSVLPRKN 80
L REL + L + PH+TLL + L + + + S + + +
Sbjct: 49 LERELGLQGLRR-VPFPHVTLLGYSGLDHGHFRNELEACVERLGPITLRTSGLGLFFQPH 107
Query: 81 NLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPS--VPTDRVGNV 138
++ L + +S L + H ++E++ T+G ++D + P W PH LA + P ++ +
Sbjct: 108 PVIYLPVVRSRALTDFHREMWESVGTRGGRLDPHHAPDAWTPHLTLAQADLTPESQL-DA 166
Query: 139 CNILAKVKLPLQGDVEHVRLVQ 160
IL+++ L L+ +V ++ L +
Sbjct: 167 VRILSRLDLSLEFEVRNLTLFE 188
>gi|423667789|ref|ZP_17642818.1| hypothetical protein IKO_01486 [Bacillus cereus VDM034]
gi|423676149|ref|ZP_17651088.1| hypothetical protein IKS_03692 [Bacillus cereus VDM062]
gi|401303454|gb|EJS09016.1| hypothetical protein IKO_01486 [Bacillus cereus VDM034]
gi|401307270|gb|EJS12695.1| hypothetical protein IKS_03692 [Bacillus cereus VDM062]
Length = 186
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL---------LVTQ 47
YAI FD +K VREL + N+I+ + EPHITL L T+
Sbjct: 2 YAIIATFDCVFTNK-------VRELQNELTNIIETNELAGVEPHITLADYKELDVNLYTK 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + V FP + ++F + L+ L + + HDN
Sbjct: 55 KLEEFVVFQENIAAVTFSSVGTFPTNGTIFLAPTITDELITLHHSYHDYFKTFHDNP--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + +++ +V I K + L +E ++L+++
Sbjct: 112 --------QSYYVPGKWIPHCTIANGLNSNQFLSVMEYIYEKFNVTL-ASIEKLKLIKV 161
>gi|336424236|ref|ZP_08604277.1| hypothetical protein HMPREF0994_00283 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336003340|gb|EGN33424.1| hypothetical protein HMPREF0994_00283 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 179
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITL-----LVTQPC----- 49
MQYAI+LY+D + K+ + K V + + ++ + PH+TL + C
Sbjct: 1 MQYAIELYYDKETEQKLFNLAKRVADEKLSTKFLEWKTRPHLTLACFNDVNETKCIQQLN 60
Query: 50 --SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATK 107
+K +P I + F + ++F+ P N+ + RELH+ L +
Sbjct: 61 NFAKTHKTMPAYIGSIGMFNDTRTIFAS-PVMNDSMYQF------QRELHEYL-QDFDIT 112
Query: 108 GLQIDKEYVPGVWFPHCMLAPSVPTDR 134
G + Y P W PHC LA + D
Sbjct: 113 GWEW---YCPDRWVPHCTLALTKEDDE 136
>gi|229109569|ref|ZP_04239159.1| hypothetical protein bcere0018_18330 [Bacillus cereus Rock1-15]
gi|423648025|ref|ZP_17623595.1| hypothetical protein IKA_01812 [Bacillus cereus VD169]
gi|228673905|gb|EEL29159.1| hypothetical protein bcere0018_18330 [Bacillus cereus Rock1-15]
gi|401285979|gb|EJR91818.1| hypothetical protein IKA_01812 [Bacillus cereus VD169]
Length = 186
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 35/177 (19%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD KI + L EL N+I EPHIT+ L T+
Sbjct: 2 YAIIATFDRVFTHKITE---LQNEL--TNVIGTNQLAGVEPHITIADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+I + P V FP + ++F + LL L + + HDN
Sbjct: 57 GEFVAIQENIDAVTFPSVGIFPTNGTVFLAPTVTDELLKLHYSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V I K +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTKQFLSVMEYIYGKFNFA-TASIEKLKLIKV 161
>gi|163939916|ref|YP_001644800.1| hypothetical protein BcerKBAB4_1941 [Bacillus weihenstephanensis
KBAB4]
gi|163862113|gb|ABY43172.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
Length = 186
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPE----DEPHITL---------LVTQ 47
YAI FD +KI REL + N+I PHITL L T+
Sbjct: 2 YAIIATFDCVFTNKI-------RELQNELTNIIGTNPLAGVAPHITLADYNELDVNLYTE 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F + LL L + + HDNL
Sbjct: 55 KLEEFVVFQENIAAVTFPSVGTFPTNRTIFLAPTITDELLRLHHSYHDYFKVFHDNL--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + +++ +V I K + L +E ++L+++
Sbjct: 112 --------QSYYVPGKWVPHCTIANGLNSNQFLSVMEYIYEKFDVTL-ASIEKLKLIKV 161
>gi|423555130|ref|ZP_17531433.1| hypothetical protein II3_00335 [Bacillus cereus MC67]
gi|401197470|gb|EJR04401.1| hypothetical protein II3_00335 [Bacillus cereus MC67]
Length = 186
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL---------LVTQ 47
YAI FD +KI REL + N+I EPHITL L T+
Sbjct: 2 YAIIATFDCVFTNKI-------RELQNELTNIIGINQLAGVEPHITLADYNELDVNLYTE 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F + LL L + + HDN
Sbjct: 55 KLEEFVVFQENIAAVTFPSVGTFPTNRTIFLAPTITDELLRLHHSYHDYFKVFHDNP--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + +++ +V I K + L +E ++L+++
Sbjct: 112 --------NSYYVPGKWVPHCTIANGLNSNQFLSVMEYIYEKFDVTL-ASIEKLKLIKV 161
>gi|30020210|ref|NP_831841.1| hypothetical protein BC2073 [Bacillus cereus ATCC 14579]
gi|229127512|ref|ZP_04256504.1| hypothetical protein bcere0015_19620 [Bacillus cereus BDRD-Cer4]
gi|29895760|gb|AAP09042.1| hypothetical protein BC_2073 [Bacillus cereus ATCC 14579]
gi|228655969|gb|EEL11815.1| hypothetical protein bcere0015_19620 [Bacillus cereus BDRD-Cer4]
Length = 186
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI + L EL N+I EPHITL L T+
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNVIGTNQLAGVEPHITLADYNELDVHLYTEKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E++ + P V FP + ++F + LL L + + HDN
Sbjct: 57 GEFVAIQENMDAVTFPSVGIFPTNGTVFLAPTVTSELLKLHHSYHDYFKTFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + +V + + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTKQFLSVLEYIYEKFDFVTASIEKLKLIKV 161
>gi|226323994|ref|ZP_03799512.1| hypothetical protein COPCOM_01771 [Coprococcus comes ATCC 27758]
gi|225207543|gb|EEG89897.1| hypothetical protein COPCOM_01771 [Coprococcus comes ATCC 27758]
Length = 174
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 14/169 (8%)
Query: 3 YAIKLYFDDALKSKILDSMKLV--RELNIPNLIKPEDEPHITLLVTQPCSKPEDI----- 55
Y I LYFD+ KI M+ + R N+ +I + PHITL + + I
Sbjct: 2 YLISLYFDEGTNKKIQLYMEQIAQRTGNMA-MINGKVPPHITLSAFDMAEEEKAIAGFTA 60
Query: 56 LPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALAT-KGLQIDKE 114
+ F S+ +F LP L +L A L++L ++++ + +G++I
Sbjct: 61 MEQEFEKGQIFWCSVGMF--LPHTIYLSPVLNAY---LQKLSESVFSKIRYLEGVRIQSR 115
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
Y P WFPH L + + ++ P G+ + L + P
Sbjct: 116 YQPFSWFPHTTLGKRLNQAEMREAFVVMQNQFAPFTGEAVEIGLARTNP 164
>gi|86358231|ref|YP_470123.1| calmodulin-binding protein [Rhizobium etli CFN 42]
gi|86282333|gb|ABC91396.1| putative calmodulin-binding protein [Rhizobium etli CFN 42]
Length = 144
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 24 VRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSIPLVDKF-PISLSLFSVLPRKNNL 82
+R LN P PHITL V Q + D L ++ V + P S FS + N
Sbjct: 1 MRALNYP--------PHITLAVYQEIAV--DRLAEAAERVFRISPAVTSSFSGIGCFENE 50
Query: 83 LCLLIA---QSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVC 139
+L A Q L +LH L+ + + + Y P W PHC +A +P +
Sbjct: 51 FLVLWARPNQDERLFQLHAALHREI--DPVHCHEHYRPDNWVPHCTIATKIPKAKTQAAI 108
Query: 140 NILAKVKLPLQGDVEHVRLVQLPP 163
N + ++ + ++ V+ PP
Sbjct: 109 NWANRNRMRFRVTLDAADCVRFPP 132
>gi|42781241|ref|NP_978488.1| hypothetical protein BCE_2175 [Bacillus cereus ATCC 10987]
gi|42737163|gb|AAS41096.1| hypothetical protein BCE_2175 [Bacillus cereus ATCC 10987]
Length = 186
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGVEPHITLADYNELDVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ + E+ P + P V FP + ++F + LL L + L+ HDN
Sbjct: 57 GEFVAMQENTDPVTFPSVGVFPTNGTVFLAPTVTDELLKLHHSFHDYLKIFHDN------ 110
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T + V + + +E ++L+++
Sbjct: 111 -----PNSYYVPGKWVPHCTIANRLYTKQFLRVMEYIYEKFDHATASIEKLKLIKV 161
>gi|384180069|ref|YP_005565831.1| group-specific protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324326153|gb|ADY21413.1| group-specific protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 186
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGAEPHITLADYNELNVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+ P + P V FP + ++F + LL + HDN
Sbjct: 57 GEFVVMQENTDPVTFPSVGVFPTNGTVFLAPTVTDALLKFHHSYHDYFNNFHDNQ----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T++ +V + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTNQFLSVMEYIYEKFDFATASIEKLKLIKV 161
>gi|326203007|ref|ZP_08192874.1| hypothetical protein Cpap_2318 [Clostridium papyrosolvens DSM 2782]
gi|325987084|gb|EGD47913.1| hypothetical protein Cpap_2318 [Clostridium papyrosolvens DSM 2782]
Length = 177
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 6/168 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN-LIKPEDEPHITLLVTQPCSKPEDILP-- 57
M YAI YFD I K + + +I N L E+ PHI L+ + + ++++P
Sbjct: 1 MAYAIVGYFDSKTDLFIKSIWKELADNDICNYLYNSENNPHIKFLMFEEL-ELDNVVPIL 59
Query: 58 -DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
D K + L + L + + S+ L +L ++ + G + Y
Sbjct: 60 YDFTQKHKKIDVHLKNYGFFSNDTPTLFIDFSPSIQLLQLESDIQNIFKSHGKAFNFNYF 119
Query: 117 -PGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
+W P C L + +L L G +E + +++ P
Sbjct: 120 DENIWMPSCQLTVKNENSAIKEAIELLLNKPLQFNGTIERIGIIEFHP 167
>gi|228997202|ref|ZP_04156827.1| hypothetical protein bmyco0003_17850 [Bacillus mycoides Rock3-17]
gi|229004863|ref|ZP_04162593.1| hypothetical protein bmyco0002_18100 [Bacillus mycoides Rock1-4]
gi|228756416|gb|EEM05731.1| hypothetical protein bmyco0002_18100 [Bacillus mycoides Rock1-4]
gi|228762596|gb|EEM11518.1| hypothetical protein bmyco0003_17850 [Bacillus mycoides Rock3-17]
Length = 182
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 9/162 (5%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED-EPHITL--LVTQPCSKPEDILPDS 59
YA+ FD+ ++ + + + +++ E EPHITL T +
Sbjct: 2 YAVIATFDERFSERVKEIWE-----GLTDVVHNEGLEPHITLADYHTLDLETYGNEFEKF 56
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
V++F + S P N + L + L ELH + + Q YVP
Sbjct: 57 TESVERFLVEFSSVGTFP-TNGTIFLAPTITRRLLELHQSFHNHFTDFHDQPQSYYVPEK 115
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
W PHC +A + ++ V + K VE ++L+++
Sbjct: 116 WVPHCTIANRLEREQFVRVMEFVYKGFRAQTAVVESLKLIKV 157
>gi|336117079|ref|YP_004571846.1| hypothetical protein MLP_14290 [Microlunatus phosphovorus NM-1]
gi|334684858|dbj|BAK34443.1| hypothetical protein MLP_14290 [Microlunatus phosphovorus NM-1]
Length = 169
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 17/151 (11%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
M +++L D+ +S I +L+ + + PHITL +D+ P+
Sbjct: 1 MAQSVELLLDEQAESTIRHQWELLADAGLAKPPPASVRPHITLFAA------DDLSPERE 54
Query: 61 P----LVDKFPISLSLFSVL---PRKNN-LLCLLIAQSLNLRELHDNLYEALATKGLQID 112
P ++D + + + +++ PR+ +L + SL L L + E G +
Sbjct: 55 PALSGVLDSLDLEVCIGALMIFGPRRGRVILVRQVTPSLALLCLQTRVAEIC---GAEAA 111
Query: 113 KEYVPGVWFPHCMLAPSVPTDRVGNVCNILA 143
++ PG W PH +A + DR+G+ L+
Sbjct: 112 GQFGPGRWSPHVTVARRILVDRIGDALTALS 142
>gi|229102712|ref|ZP_04233412.1| hypothetical protein bcere0019_18680 [Bacillus cereus Rock3-28]
gi|228680720|gb|EEL34897.1| hypothetical protein bcere0019_18680 [Bacillus cereus Rock3-28]
Length = 186
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 33/142 (23%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI++ L EL N+I+ EPHITL L T+
Sbjct: 2 YAIIATFDSVFTNKIIE---LQNEL--TNIIESNQLAGVEPHITLADYKELDVNLYTKKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E + + V FP + ++F + LL L + + + HDN
Sbjct: 57 EEFVAIQEKMAAVNFSSVGTFPTNGTIFLAPTITDELLTLHHSYHDHFQAFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLA 127
+ YVPG W PHC +A
Sbjct: 112 ------NSYYVPGKWVPHCTIA 127
>gi|402557634|ref|YP_006598905.1| group-specific protein [Bacillus cereus FRI-35]
gi|401798844|gb|AFQ12703.1| group-specific protein [Bacillus cereus FRI-35]
Length = 186
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGAEPHITLADYNELNVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E+ P + P V FP + ++F + LL L + HDN
Sbjct: 57 GEFVVMQENTDPVTFPSVGVFPTNGTVFLAPTVTDALLKLHHSYHDYFNNFHDN------ 110
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T++ +V + + +E ++L+++
Sbjct: 111 -----PNSYYVPGKWVPHCTIANRLHTNQFLSVMEYIYEKFDFATASIEKLKLIKV 161
>gi|84497373|ref|ZP_00996195.1| hypothetical protein JNB_14303 [Janibacter sp. HTCC2649]
gi|84382261|gb|EAP98143.1| hypothetical protein JNB_14303 [Janibacter sp. HTCC2649]
Length = 168
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 4 AIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKPEDILPDSI 60
A++L D+ + + + +R +P+ E PHITLL T + L +
Sbjct: 3 ALELLLDNGMSQAVRLEWEALRAAGLPSQANHRGETNAPHITLLATDVLQATDGELTSGL 62
Query: 61 PLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKE----YV 116
+ I L P + +L L+ S +L H A+A + D E
Sbjct: 63 SGLLPVGIRLGPVVTFPGRRLVLARLVVVSADLLAFH-----AVAVR--ASDAEPTPFTR 115
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILA 143
PG W PH LA + + G ++
Sbjct: 116 PGAWTPHVTLARGLSAEEAGRALSLFG 142
>gi|206975229|ref|ZP_03236143.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217959590|ref|YP_002338142.1| hypothetical protein BCAH187_A2189 [Bacillus cereus AH187]
gi|229138816|ref|ZP_04267397.1| hypothetical protein bcere0013_19290 [Bacillus cereus BDRD-ST26]
gi|375284099|ref|YP_005104537.1| hypothetical protein BCN_2004 [Bacillus cereus NC7401]
gi|423356015|ref|ZP_17333638.1| hypothetical protein IAU_04087 [Bacillus cereus IS075]
gi|423372090|ref|ZP_17349430.1| hypothetical protein IC5_01146 [Bacillus cereus AND1407]
gi|423568975|ref|ZP_17545221.1| hypothetical protein II7_02197 [Bacillus cereus MSX-A12]
gi|206746650|gb|EDZ58043.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217065559|gb|ACJ79809.1| group-specific protein [Bacillus cereus AH187]
gi|228644732|gb|EEL00983.1| hypothetical protein bcere0013_19290 [Bacillus cereus BDRD-ST26]
gi|358352625|dbj|BAL17797.1| conserved hypothetical protein [Bacillus cereus NC7401]
gi|401080481|gb|EJP88768.1| hypothetical protein IAU_04087 [Bacillus cereus IS075]
gi|401100266|gb|EJQ08262.1| hypothetical protein IC5_01146 [Bacillus cereus AND1407]
gi|401207759|gb|EJR14537.1| hypothetical protein II7_02197 [Bacillus cereus MSX-A12]
Length = 186
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 33/176 (18%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITLL-------------V 45
YAI FD +KI + L EL N+I EPHITL +
Sbjct: 2 YAIIATFDRVFTNKITE---LQNEL--TNIIGTNQLAGAEPHITLADYNELNVHLYKEKL 56
Query: 46 TQPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E++ P + P V FP + ++F + LL + HDN
Sbjct: 57 GEFVVMQENMDPITFPSVGVFPTNGTVFLAPTVTDALLKFHHSYHDYFNNFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
+ YVPG W PHC +A + T++ V + + +E ++L+++
Sbjct: 112 ------NSYYVPGKWVPHCTIANRLHTNQFLRVMEYIYEKFDHATASIEKLKLIKV 161
>gi|452955258|gb|EME60657.1| hypothetical protein G352_19176 [Rhodococcus ruber BKS 20-38]
Length = 172
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 10/163 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKP---ED 54
M +++L DD L + + + ++ + + + E PHITL V S P E
Sbjct: 1 MVQSVELLLDDRLDQAVREEWARLLDVGLASQARNRSESNRPHITLAVA--ASIPPGVEG 58
Query: 55 ILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKE 114
+ + I V P+ L + + + L+ + L EL ++E L +
Sbjct: 59 AMRERIAGV-PLPVRLGGMVLFGSRTATVARLVVPTAELLELQRAVFE-LVDGCPGVPPH 116
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVR 157
PG W PH LA VP R+G+ L G +R
Sbjct: 117 TRPGEWTPHVTLARRVPPGRLGSALAATRAGSRELTGVTAGIR 159
>gi|160903073|ref|YP_001568654.1| hypothetical protein Pmob_1637 [Petrotoga mobilis SJ95]
gi|160360717|gb|ABX32331.1| hypothetical protein Pmob_1637 [Petrotoga mobilis SJ95]
Length = 186
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 39 PHITLLVTQ--PCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLREL 96
PHIT V + + +L + +D I ++ K L + + + +
Sbjct: 39 PHITWSVAENYKVNDLNKLLKKATKELDSLTIKTEGVALFTGKKLTLYIPVKPTKEILNF 98
Query: 97 HDNLYEALATKGLQIDKEYVPGVWFPHCMLA-PSVPTDRVGNVCNILAKVKLPLQGDVEH 155
H+ L+ + ++++ Y P WFPH LA + + +G + + L+ KL Q +E
Sbjct: 99 HEYLWNLVNVNDSKLNEYYSPDNWFPHITLAVEDINKENIGQITSYLSDKKLKYQIKLES 158
Query: 156 VRLVQ 160
+ LV
Sbjct: 159 LSLVH 163
>gi|374613357|ref|ZP_09686125.1| hypothetical protein MyctuDRAFT_6179 [Mycobacterium tusciae JS617]
gi|373546188|gb|EHP72965.1| hypothetical protein MyctuDRAFT_6179 [Mycobacterium tusciae JS617]
Length = 172
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 16/148 (10%)
Query: 1 MQYAIKLYFD---DALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILP 57
M ++++L FD DA I D + + P + PH+TL V + + ++ +
Sbjct: 1 MVHSVELLFDSDTDAAIRSIWDDLTEAGVRSQAAHKSPSNRPHVTLAVAE---RMDESVN 57
Query: 58 DSI-PLVDKFPISLSLFS--VLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDK- 113
D++ P+ + P+S ++ + + R++ L L+ S L +H E G +
Sbjct: 58 DALRPVRKRLPLSCTIGAPMLFGRRDFTLVRLVVPSAELLSIH---AEVQGVCGPHMPTG 114
Query: 114 ---EYVPGVWFPHCMLAPSVPTDRVGNV 138
PG W PH LA VP D++ +V
Sbjct: 115 PLPHSEPGQWTPHVTLARRVPADQLQSV 142
>gi|423391597|ref|ZP_17368823.1| hypothetical protein ICG_03445 [Bacillus cereus BAG1X1-3]
gi|401637430|gb|EJS55183.1| hypothetical protein ICG_03445 [Bacillus cereus BAG1X1-3]
Length = 150
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 27/162 (16%)
Query: 3 YAIKLYFDDALKSKILD-SMKLVRELNIPNLIKPEDEPHITL---------LVTQPCSK- 51
YAI D +KI + +L + I L E PHITL L T+ +
Sbjct: 2 YAIIATLDSVFTNKIKELQNELTNIIGINQLAGVE--PHITLADYNELDVNLYTKKLEEF 59
Query: 52 ---PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKG 108
E+I + P V FP + ++F + LL L + + HDN
Sbjct: 60 VVFQENISAVTFPSVGTFPTNGTIFLAPTITDELLRLHHSYHDYFKTFHDN--------- 110
Query: 109 LQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQ 150
YVPG W PHC +A + +++ +V + L LQ
Sbjct: 111 --PQSYYVPGKWIPHCTIANGLNSNQFLSVMEYIYMKNLMLQ 150
>gi|118467127|ref|YP_882385.1| hypothetical protein MAV_3203 [Mycobacterium avium 104]
gi|118168414|gb|ABK69311.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 169
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
M ++I+L FD ++ I + K + IP+ P PH+TL V + + D L
Sbjct: 1 MVHSIELVFDPDTEAAIRQTWKALAAAGIPSQ-APASRPHVTLAVAEAIAADVDAL--LA 57
Query: 61 PLVDKFPISLSLFS--VLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQID--KEYV 116
PL + P+ + + + R + + L+ + L +LH ++ L L+ +
Sbjct: 58 PLCTRLPLPCLIGAPVLFGRGSVVFARLVVPTGELLDLHAQVHR-LCAPHLRPAPMPNSL 116
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAK 144
PG W H +A V ++G I +
Sbjct: 117 PGQWTGHVTMARRVGGAQLGRALRIAGR 144
>gi|229096616|ref|ZP_04227587.1| hypothetical protein bcere0020_18630 [Bacillus cereus Rock3-29]
gi|423443115|ref|ZP_17420021.1| hypothetical protein IEA_03445 [Bacillus cereus BAG4X2-1]
gi|423446638|ref|ZP_17423517.1| hypothetical protein IEC_01246 [Bacillus cereus BAG5O-1]
gi|423466198|ref|ZP_17442966.1| hypothetical protein IEK_03385 [Bacillus cereus BAG6O-1]
gi|423535603|ref|ZP_17512021.1| hypothetical protein IGI_03435 [Bacillus cereus HuB2-9]
gi|423539160|ref|ZP_17515551.1| hypothetical protein IGK_01252 [Bacillus cereus HuB4-10]
gi|228686822|gb|EEL40729.1| hypothetical protein bcere0020_18630 [Bacillus cereus Rock3-29]
gi|401132010|gb|EJQ39658.1| hypothetical protein IEC_01246 [Bacillus cereus BAG5O-1]
gi|401175779|gb|EJQ82979.1| hypothetical protein IGK_01252 [Bacillus cereus HuB4-10]
gi|402413116|gb|EJV45463.1| hypothetical protein IEA_03445 [Bacillus cereus BAG4X2-1]
gi|402415630|gb|EJV47951.1| hypothetical protein IEK_03385 [Bacillus cereus BAG6O-1]
gi|402461656|gb|EJV93368.1| hypothetical protein IGI_03435 [Bacillus cereus HuB2-9]
Length = 186
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 33/142 (23%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI++ L EL N+I+ EPHITL L T+
Sbjct: 2 YAIIATFDSVFTNKIIE---LQNEL--TNIIESNQLAGVEPHITLADYKELDVNLYTKKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E + + V FP + ++F + LL L + + + HDN
Sbjct: 57 EEFVAIQEKMAAVNFFSVGTFPTNGTIFLAPTLTDELLTLHHSYHDHFQAFHDNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLA 127
+ YVPG W PHC +A
Sbjct: 112 ------NSYYVPGKWVPHCTIA 127
>gi|377557964|ref|ZP_09787586.1| hypothetical protein GOOTI_025_00310 [Gordonia otitidis NBRC
100426]
gi|377524869|dbj|GAB32751.1| hypothetical protein GOOTI_025_00310 [Gordonia otitidis NBRC
100426]
Length = 188
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLI---KPEDEPHITLLVTQPCSKPEDILP 57
M ++++ FDD + ++ + L+R L++PN + PH+T+ Q + D
Sbjct: 1 MAHSVEFLFDDESERRLRERWDLLRALDLPNAGTNPSATNRPHVTIAAAQRIAPAADT-- 58
Query: 58 DSIPLVD-KFPISLSLFS--VLPRKNNL-LCLLIAQSLNLRELHDNLYEALATKGLQIDK 113
+I VD + PI +++ S V R + L + LL+ + L H+ + +A+ D
Sbjct: 59 -AIRHVDVRLPIRVAVGSPIVFGRGDRLVVALLVVPTAQLLAAHEAVVDAVVAHASVADT 117
Query: 114 E------YVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQG 151
E +PG W PH +A V D+V V +A + LP G
Sbjct: 118 ESGVFAHTLPGSWTPHVTMARRVHADQVHEV---IAALDLPPSG 158
>gi|229132950|ref|ZP_04261793.1| hypothetical protein bcere0014_18780 [Bacillus cereus BDRD-ST196]
gi|423366126|ref|ZP_17343559.1| hypothetical protein IC3_01228 [Bacillus cereus VD142]
gi|228650532|gb|EEL06524.1| hypothetical protein bcere0014_18780 [Bacillus cereus BDRD-ST196]
gi|401088985|gb|EJP97162.1| hypothetical protein IC3_01228 [Bacillus cereus VD142]
Length = 186
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 38 EPHITL---------LVTQPCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLC 84
EPHITL L T+ + E+I + P V FP + ++F + LL
Sbjct: 36 EPHITLADYNELDVNLYTKKLEEFVVFQENISAVTFPSVGTFPTNGTIFLAPTITDELLR 95
Query: 85 LLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILA 143
L + + HDN YVPG W PHC +A + +++ +V I
Sbjct: 96 LHHSYHDYFKTFHDNP-----------QSYYVPGKWIPHCTIANGLNSNQFLSVMEYIYE 144
Query: 144 KVKLPLQGDVEHVRLVQL 161
K + L +E ++L+++
Sbjct: 145 KFNVTL-ASIEKLKLIKV 161
>gi|407704536|ref|YP_006828121.1| Molybdopterin biosynthesis protein moeA [Bacillus thuringiensis
MC28]
gi|407382221|gb|AFU12722.1| group-specific protein [Bacillus thuringiensis MC28]
Length = 186
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 33/142 (23%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQPC 49
YAI FD +KI++ L EL N+I+ EPHITL L T+
Sbjct: 2 YAIIATFDSVFTNKIIE---LQNEL--TNIIESNQLAGVEPHITLADYKELDVNLYTKKL 56
Query: 50 SK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALA 105
+ E + + V FP + ++F + LL L + + + H+N
Sbjct: 57 EEFVAIQEKMAAVNFSSVGTFPTNGTIFLAPTLTDELLTLHHSYHDHFQAFHNNP----- 111
Query: 106 TKGLQIDKEYVPGVWFPHCMLA 127
+ YVPG W PHC +A
Sbjct: 112 ------NSYYVPGKWIPHCTIA 127
>gi|331091596|ref|ZP_08340432.1| hypothetical protein HMPREF9477_01075 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330403623|gb|EGG83179.1| hypothetical protein HMPREF9477_01075 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 174
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 22/173 (12%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE--PHITLLVTQPCSKPEDI--LPD 58
Y I LYFD+ +I + + + N+ E++ PHIT+ + + E I L +
Sbjct: 2 YFISLYFDNKTNERIQRYIDKIANCS-GNVFMTENKVPPHITVSSFEMGEEREIIGKLRE 60
Query: 59 SIPLVDKFPI---SLSLF-----SVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQ 110
+I ++ + + S+ +F + P NN L NL + N++ L T +
Sbjct: 61 NIEVLSRGEVIWCSVGMFLPSVIYIAPVLNNYLQ-------NLSKFIYNIF--LQTGNIS 111
Query: 111 IDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
+ Y P WFPH + + + + L +G+V H+ L + P
Sbjct: 112 VSPYYRPMQWFPHATVGKKLSREEMIGAVRALQDEFGMFRGEVTHIGLAKTNP 164
>gi|254775651|ref|ZP_05217167.1| hypothetical protein MaviaA2_13415 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 169
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
M ++I+L FD ++ I + K + IP+ P PH+TL V + + D L
Sbjct: 1 MVHSIELVFDPDTEAAIRQTWKALAAAGIPSQ-APASRPHVTLAVAEAIAADVDAL--LA 57
Query: 61 PLVDKFPISLSLFS--VLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQID--KEYV 116
PL + P+ + + + R + + L+ + L +LH ++ L L+ +
Sbjct: 58 PLRARLPLPCLIGAPVLFGRGSVVFARLVVPTGELLDLHAQVHR-LCAPHLRPAPMPNSL 116
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAK 144
PG W H +A V ++G I +
Sbjct: 117 PGQWTGHVTMARRVGGAQLGRALRIAGR 144
>gi|228991120|ref|ZP_04151080.1| hypothetical protein bpmyx0001_18790 [Bacillus pseudomycoides DSM
12442]
gi|228768656|gb|EEM17259.1| hypothetical protein bpmyx0001_18790 [Bacillus pseudomycoides DSM
12442]
Length = 167
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 3/126 (2%)
Query: 38 EPHITLLVTQPC--SKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRE 95
EPHITL+ + V++F + S P N + L + L E
Sbjct: 18 EPHITLVDYHALDLETYRNEFEKFTEGVERFLVEFSSVGTFP-TNGTIFLAPTITRRLLE 76
Query: 96 LHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEH 155
LH + + Q YVP W PHC +A + ++ V + + K VE
Sbjct: 77 LHQSFHNHFTDFHDQPQSYYVPEKWVPHCTIANRLEREQFVRVMDFVYKGFRAQTAVVES 136
Query: 156 VRLVQL 161
++L+++
Sbjct: 137 LKLIKV 142
>gi|423481983|ref|ZP_17458673.1| hypothetical protein IEQ_01761 [Bacillus cereus BAG6X1-2]
gi|401145191|gb|EJQ52718.1| hypothetical protein IEQ_01761 [Bacillus cereus BAG6X1-2]
Length = 186
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPED----EPHITL---------LVTQP- 48
YAI FD +KI + + NLI EPHITL L T+
Sbjct: 2 YAIIATFDRLFINKITEVQN-----ELTNLIGTNQLAGVEPHITLADYNELDVNLYTEKL 56
Query: 49 ---CSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHD--NLYEA 103
+ E+I + P V FP + ++F + LL L + + HD N Y
Sbjct: 57 EGFVAIQENIAAVTFPSVGTFPTNGTIFLAPTINDELLRLHHSYHDYFKTFHDIPNSY-- 114
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + +++ +V I K + + +E ++L+++
Sbjct: 115 -----------YVPGKWVPHCTIANGLNSNQFLSVMEYIYEKFDVTI-ASIEKLKLIKV 161
>gi|423510008|ref|ZP_17486539.1| hypothetical protein IG3_01505 [Bacillus cereus HuA2-1]
gi|402456240|gb|EJV88018.1| hypothetical protein IG3_01505 [Bacillus cereus HuA2-1]
Length = 186
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELN--IPNLIKPED----EPHITL---------LVTQ 47
YAI FD +K VREL + N+I+ + EPHITL L T+
Sbjct: 2 YAIIATFDCVSTNK-------VRELQNELTNIIETNELAGVEPHITLADYKELDVNLYTK 54
Query: 48 PCSK----PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEA 103
+ E+I + P V FP + ++F + LL L + + HDN
Sbjct: 55 RLEEFVAFQENISTVTFPSVGTFPTNGTIFLAPTITDELLRLHHSYHDYFKIFHDNP--- 111
Query: 104 LATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + ++ +V I K + L +E ++L+++
Sbjct: 112 --------QSYYVPGKWIPHCTIANGLNLNQFLSVMECIYEKFDVTL-ASIEKLKLIKV 161
>gi|229020955|ref|ZP_04177643.1| hypothetical protein bcere0030_54040 [Bacillus cereus AH1273]
gi|229027659|ref|ZP_04183859.1| hypothetical protein bcere0029_58570 [Bacillus cereus AH1272]
gi|228733639|gb|EEL84428.1| hypothetical protein bcere0029_58570 [Bacillus cereus AH1272]
gi|228740348|gb|EEL90658.1| hypothetical protein bcere0030_54040 [Bacillus cereus AH1273]
Length = 186
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 3 YAIKLYFDDALKSKILD-SMKLVRELNIPNLIKPEDEPHITL---------LVTQPCSK- 51
YAI D +KI + +L + I L E PHITL L T+ +
Sbjct: 2 YAIIATLDSVFTNKIKELQNELTNIIGINQLAGVE--PHITLADYNELDVNLYTKKLEEF 59
Query: 52 ---PEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKG 108
E+I + P V FP + ++F + LL L + + HDN
Sbjct: 60 VVFQENISAVTFPSVGTFPTNGTIFLAPTITDELLKLHHSYHDYFKTFHDNP-------- 111
Query: 109 LQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCN-ILAKVKLPLQGDVEHVRLVQL 161
YVPG W PHC +A + +++ +V I K + + +E ++L+++
Sbjct: 112 ---QSYYVPGKWIPHCTIANGLNSNQFLSVMECIYEKFDVTI-ASIEKLKLIKV 161
>gi|395223261|ref|ZP_10403254.1| hypothetical protein O71_23932 [Pontibacter sp. BAB1700]
gi|394452737|gb|EJF07934.1| hypothetical protein O71_23932 [Pontibacter sp. BAB1700]
Length = 183
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 4 AIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQ--PCSKPEDILPDSIP 61
A+ D + +++ + +L+ E N +K PH+TLL + + + L ++
Sbjct: 3 AVTSLLDPSHSARVSELTELLDEKFGLNEVKMTPYPHLTLLTAEIPDMEEIQQYLAETSR 62
Query: 62 LVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWF 121
+ F I + V P + ++ + + ++ L +LH L+ ++ ++ Y P +W
Sbjct: 63 ETEPFTIRTTGLGVFPGEKPVIYIPVLRTAPLNQLHARLHRDISEMSSEMGIYYNPNMWL 122
Query: 122 PHCMLA 127
PH LA
Sbjct: 123 PHISLA 128
>gi|417932126|ref|ZP_12575475.1| hypothetical protein HMPREF1162_1313 [Propionibacterium acnes
SK182B-JCVI]
gi|340774736|gb|EGR97211.1| hypothetical protein HMPREF1162_1313 [Propionibacterium acnes
SK182B-JCVI]
Length = 212
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 93 LRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGD 152
LR HD L+ LA G+ Y P W PH + VP G ILA V PL+
Sbjct: 135 LRRPHDLLHRRLAAVGVTAFNYYSPRWWNPHVTMGYQVPPKLQGRAVRILAGVA-PLEVG 193
Query: 153 VEHVRLVQL 161
V V + Q+
Sbjct: 194 VAGVSVWQV 202
>gi|453075280|ref|ZP_21978068.1| hypothetical protein G419_08354 [Rhodococcus triatomae BKS 15-14]
gi|452763570|gb|EME21851.1| hypothetical protein G419_08354 [Rhodococcus triatomae BKS 15-14]
Length = 170
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 6/146 (4%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPN---LIKPEDEPHITLLVTQPCSKPEDILP 57
M +++L D L + + + + +P+ + K + PH+TL V Q D+L
Sbjct: 1 MVQSVELLLDSGLDDTVRREWRRLADAALPSQGVVRKSTNRPHVTLAVAQHIDPETDLLL 60
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALAT-KGLQIDKEYV 116
ISL V L L+ + L L +++ L G +
Sbjct: 61 QQQLSPPDLRISLGGLVVFGGHRKTLAYLVVPTAGLLALQRSIFRILHDCPG--VPAHIH 118
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNIL 142
PG W PH LA V D +G N++
Sbjct: 119 PGDWTPHITLARRVFPDEIGPALNLV 144
>gi|238922391|ref|YP_002935905.1| hypothetical protein EUBELI_20627 [Eubacterium eligens ATCC 27750]
gi|238874063|gb|ACR73771.1| Hypothetical protein EUBELI_20627 [Eubacterium eligens ATCC 27750]
Length = 172
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 3 YAIKLYFDDALK---SKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDS 59
Y I YFD+ + +++D+ + +E +I+ PH+T+ + KP+++ +
Sbjct: 2 YLISAYFDEHVTKGLQRLIDN--IAKETGNTYMIENNVPPHLTI-SSFETRKPDNLKEEF 58
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEAL-ATKGLQIDKEYVPG 118
+ L +++FS+ ++ L L + +Y+ A + + I++ Y P
Sbjct: 59 MKLNKIGAGEINIFSIGQFLPYVMYATPVLDEYLMHLSNEVYDIFSAREDVTINRCYKPY 118
Query: 119 VWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPPN 164
WFPH L + +++ +L +P++G + V L Q P+
Sbjct: 119 NWFPHITLGKKLEKEQMIMAMRVLQTHFIPIKGKIVMVGLSQTNPH 164
>gi|118471806|ref|YP_887505.1| hypothetical protein MSMEG_3191 [Mycobacterium smegmatis str. MC2
155]
gi|399987519|ref|YP_006567868.1| hypothetical protein MSMEI_3109 [Mycobacterium smegmatis str. MC2
155]
gi|118173093|gb|ABK73989.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
gi|399232080|gb|AFP39573.1| hypothetical protein MSMEI_3109 [Mycobacterium smegmatis str. MC2
155]
Length = 169
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 12/150 (8%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPC-SKPEDILPDS 59
M ++++L FD ++ + +R+ IP+ P PH TL V Q ++ E IL
Sbjct: 1 MVHSVELVFDAETEATVRAIWDELRDAGIPSQ-APASRPHATLTVAQHIDAEVEQIL--- 56
Query: 60 IPLVDKFPISLSLFSVL--PRKNNLLCLLIAQSLNLRELHDNLYEA---LATKGLQIDKE 114
P+ + P+ L + L R +L L+ S +L ++ ++ A L T E
Sbjct: 57 RPVAARLPLPCRLGATLIFGRSAGVLARLLLPSPDLLDVQAQVHRACVPLMTPAPMPHSE 116
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAK 144
PG W PH LA V R+ I +
Sbjct: 117 --PGQWTPHVTLARRVAPTRLATALRIAGR 144
>gi|331699824|ref|YP_004336063.1| hypothetical protein Psed_6108 [Pseudonocardia dioxanivorans
CB1190]
gi|326954513|gb|AEA28210.1| hypothetical protein Psed_6108 [Pseudonocardia dioxanivorans
CB1190]
Length = 162
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 70 LSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLA 127
L+ + + +++ L L L +HD +++ LA K Y+PG W PHC+LA
Sbjct: 68 LTNLTAVAGRDDQLVLAAVVDTELLAVHDAVHDVLAGKVRGPVATYLPGSWVPHCVLA 125
>gi|453363489|dbj|GAC80782.1| hypothetical protein GM1_021_00680 [Gordonia malaquae NBRC 108250]
Length = 177
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 54/142 (38%), Gaps = 10/142 (7%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQPCSKPEDILPDSI 60
+ +I+L DD + I D + + L + I PH TL+ S + L
Sbjct: 9 VAASIELLLDDTADAAIRDRWRSLAALGVDPAIG---RPHCTLIAGARISGADSHLAT-- 63
Query: 61 PLVDKFPISLSLF--SVLPRKNNLLCLL--IAQSLNLRELHDNLYEALATKGLQIDKEYV 116
+ + PI + + LP L L + S L +H ++ +
Sbjct: 64 -IAQRLPIPVLIGPPVALPAGPGLFTLAASVVPSSELLSVHATVHRLCGDAVDGLVDHVT 122
Query: 117 PGVWFPHCMLAPSVPTDRVGNV 138
PG W PH LA + DRVG+
Sbjct: 123 PGSWTPHITLARRLTADRVGSA 144
>gi|395205991|ref|ZP_10396622.1| hypothetical protein PA08_2374 [Propionibacterium humerusii P08]
gi|422440888|ref|ZP_16517701.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
gi|422471992|ref|ZP_16548480.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
gi|422572756|ref|ZP_16648323.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
gi|313836471|gb|EFS74185.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
gi|314928926|gb|EFS92757.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
gi|314971083|gb|EFT15181.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
gi|328906627|gb|EGG26402.1| hypothetical protein PA08_2374 [Propionibacterium humerusii P08]
Length = 210
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 92 NLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQG 151
+LR H+ L+ LA G+ Y P W PH + VP+ G ILA V +PL+
Sbjct: 134 DLRRPHELLHRRLAAAGVVAFNYYGPRWWNPHVTMGYQVPSKLQGRAVRILAGV-VPLEV 192
Query: 152 DVEHVRLVQL 161
V V + ++
Sbjct: 193 GVSGVSVWRV 202
>gi|351723111|ref|NP_001238035.1| uncharacterized protein LOC100305618 [Glycine max]
gi|255626105|gb|ACU13397.1| unknown [Glycine max]
Length = 108
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIP-NLIKPEDEPHITLLVT---QPCSKPEDIL 56
+ +AI+LY D AL++++L + ++ I +LI+ E PHITL +P SK E +L
Sbjct: 5 LGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEP-SKLESLL 63
Query: 57 PDSIPLVDKFPISLSLFSVLPRK-NNLLCL 85
D P++ S + P +NLL L
Sbjct: 64 KGFASKHDPLPLTFSSLATFPNDPDNLLFL 93
>gi|407972933|ref|ZP_11153846.1| hypothetical protein NA8A_01495 [Nitratireductor indicus C115]
gi|407431704|gb|EKF44375.1| hypothetical protein NA8A_01495 [Nitratireductor indicus C115]
Length = 171
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 15/115 (13%)
Query: 49 CSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKG 108
+ P I D + D P+ L L PR++ LR+LH +L+ A+ G
Sbjct: 62 AAGPLTIAFDRVCFFDNAPLVLWL---RPREDR----------GLRDLHRHLHTAIGEDG 108
Query: 109 LQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163
D Y P W PH LA SVP N + K + +Q PP
Sbjct: 109 --CDPHYRPLQWQPHATLASSVPGRNRQNALDFAEKPIADFSMTFDIADALQWPP 161
>gi|407278419|ref|ZP_11106889.1| hypothetical protein RhP14_18051 [Rhodococcus sp. P14]
Length = 172
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 10/163 (6%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE---PHITLLVTQPCSKP---ED 54
M +++L DD L + + + ++ + + + E PHITL V S P E
Sbjct: 1 MVQSVELLLDDRLDQAVREEWARLLDVGLVSQARNRSESNRPHITLAVA--ASIPPGVEG 58
Query: 55 ILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKE 114
+ + I + P+ L + + + L+ + L EL ++E L +
Sbjct: 59 AMRERI-TGEPLPVRLGGMVLFGSRTATVARLVVPTAELLELQRVVFE-LIDGCPGVPPH 116
Query: 115 YVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVR 157
PG W PH LA VP R+G+ L G +R
Sbjct: 117 IRPGEWTPHVTLARRVPPGRLGSALTATRAGTRELTGVSAGIR 159
>gi|381183666|ref|ZP_09892382.1| group-specific protein [Listeriaceae bacterium TTU M1-001]
gi|380316436|gb|EIA19839.1| group-specific protein [Listeriaceae bacterium TTU M1-001]
Length = 190
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 68/161 (42%), Gaps = 4/161 (2%)
Query: 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDE--PHITLLVTQPCSKPEDILPDSI 60
YAI FD+ + KI ++ + N + PHIT+ + P+ +
Sbjct: 2 YAIIALFDEPTEQKIKAIWYDLKRRGMSNYVDDMRHRLPHITIATYESLHHPQLVNKLIH 61
Query: 61 PLVDKFPISLSLFSVLPR-KNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGV 119
++ +++ +V K+ ++ L + L LH+ + Y+PG
Sbjct: 62 FYKGQYEMNVEFHAVGSFLKSGVVFLAPTITKELLALHEKHHLMFDDYNHNPASHYLPGK 121
Query: 120 WFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQ 160
W PH L+ + +++G+V K+ P++G + + L++
Sbjct: 122 WTPHTTLSSHLAAEKLGHVFQYSVKLA-PIKGKITSIALIE 161
>gi|397613832|gb|EJK62451.1| hypothetical protein THAOC_16938 [Thalassiosira oceanica]
Length = 398
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 66 FPISLSLFSVLPRK----NNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVW- 120
F I +L R+ N +L LL+ ++ N+ +LH L+ A K + KEY G +
Sbjct: 104 FTIGAALIREGLRRRDSGNRVLNLLLEKASNMNDLHATLHVNEARKLAWLSKEYTEGAFI 163
Query: 121 FPHCMLAPS-VPTDRVGNVCNILAKVKLPL 149
P +A + T ++G V +I+A + PL
Sbjct: 164 IPQATVAKHLIATKKIGQVRHIVASMNGPL 193
>gi|359420846|ref|ZP_09212777.1| hypothetical protein GOARA_063_00450 [Gordonia araii NBRC 100433]
gi|358243119|dbj|GAB10846.1| hypothetical protein GOARA_063_00450 [Gordonia araii NBRC 100433]
Length = 178
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 21/156 (13%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKP--EDEPHITLLVTQPCSKPEDILPD 58
M ++++L DD + ++ V L L P + PHITL+ + E L
Sbjct: 1 MVHSLELVLDDEADAAVIAE---VNRLAAAGLRNPHRDQRPHITLVAARAVD--ESALSV 55
Query: 59 SIPLVDKFPISLSL-----FSVLPRKNNLLCLL---IAQSLNLRELHDNLYEALATKGLQ 110
P+ + PI++ L FS + +L + S +L +H + A
Sbjct: 56 LAPVAQRLPITVRLGAPIVFSHGAAGAHGGHVLARSVVPSTDLLGIHATVVRLAAD---H 112
Query: 111 IDKEYV---PGVWFPHCMLAPSVPTDRVGNVCNILA 143
ID E PG W PH LA + ++V + LA
Sbjct: 113 IDGELAHSRPGSWSPHVTLARRLSGEQVAAAIDFLA 148
>gi|399575480|ref|ZP_10769238.1| hypothetical protein HSB1_12770 [Halogranum salarium B-1]
gi|399239748|gb|EJN60674.1| hypothetical protein HSB1_12770 [Halogranum salarium B-1]
Length = 175
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Query: 64 DKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPH 123
D F + V P N + + + SL L LH L L G + Y P WFPH
Sbjct: 65 DPFSVRTDGIGVFP--GNHVYIPVTNSLALGGLHHELVGELRELGDPLMPFYEPDSWFPH 122
Query: 124 CMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLVQL 161
LA S+ ++ V + L + V++V + L
Sbjct: 123 VGLALSLDDEQASEVVSFLLDYDFAWEFTVDNVEVEYL 160
>gi|392417848|ref|YP_006454453.1| hypothetical protein Mycch_4052 [Mycobacterium chubuense NBB4]
gi|390617624|gb|AFM18774.1| hypothetical protein Mycch_4052 [Mycobacterium chubuense NBB4]
Length = 174
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 5/162 (3%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNL---IKPEDEPHITLLVTQPCSKPEDILP 57
M A+ L FD + + + +P+L PH++ V + +
Sbjct: 1 MALAVCLLFDRRSDRAVRSLWDRLESVGVPSLRSHTHGRHLPHVSYAVLRQWDDGA-VRA 59
Query: 58 DSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVP 117
+ D P+ L + + + L S + + A+AT G + K Y P
Sbjct: 60 ALAGIDDGDPVELDFDGMGVFRRGRVWLAAGVSADFVARQQRVVAAVATAGADLHKHYRP 119
Query: 118 GVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEHVRLV 159
GVW PHC LAP ++ +V + V LPL ++ L+
Sbjct: 120 GVWLPHCSLAPRATLSQLPDVAAAVMDV-LPLHTRLDRAALI 160
>gi|440225652|ref|YP_007332743.1| putative calmodulin-binding protein [Rhizobium tropici CIAT 899]
gi|440037163|gb|AGB70197.1| putative calmodulin-binding protein [Rhizobium tropici CIAT 899]
Length = 175
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 1 MQYAIKLYFDDALKSKILDSMKLVRELNI-PNLIKPEDEPHITLLVTQPCSKPEDILPDS 59
M YAI L D + +LD + P++ PH+T V Q + P
Sbjct: 1 MPYAIVLKCTDETATPVLDLWREASRFETAPSMQALNYPPHLTFAVYQDIALPSLFTAAQ 60
Query: 60 IPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLN---LRELHDNLYEALATKGLQIDKEYV 116
PIS+ FS + N + +L A+ ++ LR++H +++ + +
Sbjct: 61 KAFAGVPPISVE-FSGIGHFPNEMLVLWARPVDDHVLRQIHRAIHDEI--DPALCHEHSR 117
Query: 117 PGVWFPHCMLAPSVPT 132
P W PHC +A +PT
Sbjct: 118 PDYWQPHCTIAMKIPT 133
>gi|228997815|ref|ZP_04157419.1| 2'-5' RNA ligase [Bacillus mycoides Rock3-17]
gi|229005354|ref|ZP_04163068.1| 2'-5' RNA ligase [Bacillus mycoides Rock1-4]
gi|228755884|gb|EEM05215.1| 2'-5' RNA ligase [Bacillus mycoides Rock1-4]
gi|228761947|gb|EEM10889.1| 2'-5' RNA ligase [Bacillus mycoides Rock3-17]
Length = 168
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 8/130 (6%)
Query: 38 EPHITLLVTQPCSKPEDILPDSIP--LVDKFPISLSLFSVLPRKNNLLCLLIAQSL-NLR 94
+PHITL+ + D L I L PI + L + + L L + + +R
Sbjct: 31 QPHITLVFPFESALSNDELRAHIARKLQGIHPIEIELIDRISHEGEYLFLRVEKGREQVR 90
Query: 95 ELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVE 154
ELHD LY+ T+ L+ D +P + PH + R + + K+ LQ +E
Sbjct: 91 ELHDELYKGPLTEFLRSD---IP--YIPHVTVGRKENEQRAIKIAEKMLKLSTRLQCIIE 145
Query: 155 HVRLVQLPPN 164
V + ++ +
Sbjct: 146 KVSVERIGED 155
>gi|357387168|ref|YP_004902006.1| hypothetical protein KSE_02000 [Kitasatospora setae KM-6054]
gi|311893642|dbj|BAJ26050.1| hypothetical protein KSE_02000 [Kitasatospora setae KM-6054]
Length = 174
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 5 IKLYFDDALKSKILDSMKLVRELNIPNLI---KPEDEPHITLLVT-----QPCSKPEDIL 56
I+L D A + + + + + +L P PH+TL V + ++ E++L
Sbjct: 4 IELTCDPAFDRAVRTVWRTLADGGVDSLADNPHPAHRPHLTLAVCGDLGPERLAEAEELL 63
Query: 57 PDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYV 116
++PL + LS FS R+ +L + L +LH L+ LA + + Y+
Sbjct: 64 AGALPLEVRLSGLLS-FSARSRRR-VLAWGVVPGPALIDLHRELWRLLAAE-PDPNPLYL 120
Query: 117 PGVWFPHCMLAPSVPTDRVGNVCNILAK 144
PG W PH L V D + +L +
Sbjct: 121 PGRWMPHLGLTRRVEPDGLTLAHRLLGR 148
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.141 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,661,239,612
Number of Sequences: 23463169
Number of extensions: 105455185
Number of successful extensions: 208649
Number of sequences better than 100.0: 158
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 208527
Number of HSP's gapped (non-prelim): 158
length of query: 166
length of database: 8,064,228,071
effective HSP length: 127
effective length of query: 39
effective length of database: 9,379,372,904
effective search space: 365795543256
effective search space used: 365795543256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)