Query 031049
Match_columns 166
No_of_seqs 166 out of 1017
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 13:18:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031049.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031049hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vgj_A Hypothetical protein PH 100.0 3.5E-30 1.2E-34 191.4 9.7 155 1-162 1-166 (184)
2 1iuh_A 2'-5' RNA ligase; riken 100.0 5.2E-29 1.8E-33 187.8 7.6 150 1-162 1-163 (198)
3 2d4g_A Hypothetical protein BS 99.9 1.3E-27 4.6E-32 175.6 9.4 149 1-162 1-154 (171)
4 1jh6_A Cyclic phosphodiesteras 99.9 3E-26 1E-30 171.6 14.6 150 3-164 9-164 (189)
5 2vfk_A AKAP18 delta; APO, hydr 99.9 6.5E-27 2.2E-31 176.6 9.8 155 1-162 3-184 (205)
6 2fsq_A ATU0111 protein; alpha- 97.9 0.00018 6.2E-09 55.2 10.9 115 3-129 43-186 (243)
7 2d4g_A Hypothetical protein BS 94.2 0.2 6.8E-06 35.3 7.4 69 83-160 3-76 (171)
8 1iuh_A 2'-5' RNA ligase; riken 93.8 0.18 6.2E-06 36.7 6.6 71 83-161 3-82 (198)
9 1vgj_A Hypothetical protein PH 92.4 0.37 1.3E-05 34.3 6.5 72 83-161 3-83 (184)
10 2vfk_A AKAP18 delta; APO, hydr 91.1 0.91 3.1E-05 32.8 7.4 72 82-160 4-93 (205)
11 1jh6_A Cyclic phosphodiesteras 89.5 1.4 4.8E-05 31.7 7.2 44 120-163 39-84 (189)
12 2fsq_A ATU0111 protein; alpha- 67.1 3.4 0.00012 31.4 2.6 75 4-78 142-228 (243)
13 3twe_A Alpha4H; unknown functi 42.2 28 0.00096 16.3 2.6 16 11-26 4-19 (27)
14 2llz_A Uncharacterized protein 40.4 34 0.0012 22.1 3.6 69 2-71 11-89 (100)
15 2jvf_A De novo protein M7; tet 37.4 30 0.001 21.1 2.8 56 9-73 27-88 (96)
16 2cpg_A REPA protein, transcrip 28.6 67 0.0023 16.6 3.4 24 1-24 1-24 (45)
17 3sxu_A DNA polymerase III subu 26.2 33 0.0011 23.7 1.9 13 116-128 63-75 (150)
18 2k1o_A Putative; repressor, tr 22.8 73 0.0025 18.4 2.6 22 2-23 15-36 (66)
19 2wny_A MTH_689, conserved prot 22.3 1.3E+02 0.0045 20.4 4.4 66 38-107 8-79 (141)
20 4h3w_A Hypothetical protein; t 20.4 1.3E+02 0.0044 22.0 4.2 10 36-45 94-103 (330)
No 1
>1vgj_A Hypothetical protein PH0099; alpha+beta, LIGT-like, structural genomics, ligase; 1.94A {Pyrococcus horikoshii} PDB: 1vdx_A 2fyh_A
Probab=99.96 E-value=3.5e-30 Score=191.35 Aligned_cols=155 Identities=16% Similarity=0.179 Sum_probs=125.4
Q ss_pred CceEEEEecChhHHHHHHHHHHHHHHhcC-CCCCCCCCCCeeEEeecCC-----CCChhhhhcccCCCcCceeEEEeeee
Q 031049 1 MQYAIKLYFDDALKSKILDSMKLVRELNI-PNLIKPEDEPHITLLVTQP-----CSKPEDILPDSIPLVDKFPISLSLFS 74 (166)
Q Consensus 1 m~~~i~l~~~~~~~~~i~~l~~~L~~~~~-~~~~~~~~~~HiTL~~~~~-----~~~~~~~l~~~~~~~~~f~l~l~~~g 74 (166)
|=|||++.+|+++.+.|.++++.+...+. ..|+ +++++||||.|.++ ++++.++|++++++.+||+++++|+|
T Consensus 1 mR~Fial~~p~~~~~~l~~~~~~l~~~~~~~~~v-~~~~lHiTL~flg~~~~~~~~~l~~~l~~~~~~~~pf~l~l~g~g 79 (184)
T 1vgj_A 1 MRAFIAIDVNESVRDSLVRAQDYIGSKEAKIKFV-ERENLHITLKFLGEITEEQAEEIKNILKKIAEKYKKHEVKVKGIG 79 (184)
T ss_dssp CEEEEEEECCHHHHHHHHHHHHHHCSSSEEEEEC-CGGGCEEEEEEEESCCHHHHHHHHHHHHHHHTTSBCEEEEEEEEE
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHhhcCCCcEec-CccccEEEEEeecCCCHHHHHHHHHHHHHHHccCCCeEEEEeeEe
Confidence 77999999999999999999999976422 1232 56799999999753 56778899998888999999999999
Q ss_pred ecCC--CCcEEEEEecCChhHHHHHHHHHHHHHhcCCCCCCCCCCCCeecceeecCCCCch---hHHHHHHHHhhcCcCc
Q 031049 75 VLPR--KNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTD---RVGNVCNILAKVKLPL 149 (166)
Q Consensus 75 ~F~~--~~~vl~l~~~~~~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~PHiTLar~~~~~---~~~~~~~~l~~~~~p~ 149 (166)
+|++ +|+|+|++++++++|.+|+++|.+.+...|+ ..+. + |+|||||||..... .+.+.++.+.+ ..+.
T Consensus 80 ~F~~~~~p~vl~~~v~~~~~L~~L~~~l~~~l~~~g~--~~~~-~--f~PHiTLar~~~~~~~~~~~~~~~~~~~-~~~~ 153 (184)
T 1vgj_A 80 VFPNPNYIRVIWAGIENDEIIREMAREIEDELAKLGF--KKEG-N--FVAHITLGRVKFVKDKLGLTMKLKELAN-EDFG 153 (184)
T ss_dssp EEECSSSEEEEEEEEETCHHHHHHHHHHHHHHHTTTC--CCCC-C--CCCEEEEEEEEEESCHHHHHHHHHHTTT-CEEE
T ss_pred eCCCCCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCC--CCCC-C--ccceEEEEeecccCcHHHHHHHHHHhcC-CCCC
Confidence 9986 4699999999889999999999999999884 4433 4 99999999965433 34444444443 2345
Q ss_pred eEEEeEEEEEecC
Q 031049 150 QGDVEHVRLVQLP 162 (166)
Q Consensus 150 ~~~v~~i~L~~~~ 162 (166)
+|+|++|.||+|.
T Consensus 154 ~~~v~~~~L~~s~ 166 (184)
T 1vgj_A 154 SFVVDAIELKKST 166 (184)
T ss_dssp EEEECEEEEEEEE
T ss_pred cEEEeEEEEEEee
Confidence 8999999999986
No 2
>1iuh_A 2'-5' RNA ligase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: d.61.1.2
Probab=99.95 E-value=5.2e-29 Score=187.77 Aligned_cols=150 Identities=17% Similarity=0.203 Sum_probs=119.5
Q ss_pred CceEEEEecChhHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEeecCC-----CCChhhhhcccCCCcCceeEEEeeeee
Q 031049 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQP-----CSKPEDILPDSIPLVDKFPISLSLFSV 75 (166)
Q Consensus 1 m~~~i~l~~~~~~~~~i~~l~~~L~~~~~~~~~~~~~~~HiTL~~~~~-----~~~~~~~l~~~~~~~~~f~l~l~~~g~ 75 (166)
|=|||++.+|+++.+.|.++++.|+......|+ .++++||||+|.++ ++++.++|++++++.+||+++++|+|+
T Consensus 1 mRlFial~~p~~~~~~l~~~~~~l~~~~~~r~v-~~~~~HiTL~flgev~~~~~~~l~~~l~~~~~~~~pf~l~l~g~g~ 79 (198)
T 1iuh_A 1 MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPV-PPHQLHLTLLFLGERPEEELPDYLALGHRLARLEAPFRARLRGTGY 79 (198)
T ss_dssp CEEEEEEECCHHHHHHHHHHHGGGTTCTTEEEC-CGGGCEEEEEEEEECCGGGHHHHHHHHHHHHHHSCCEEEEEEEEEE
T ss_pred CEEEEEEeCCHHHHHHHHHHHHHhhhhcCCccc-CCCCCEEEEEeCCcCCHHHHHHHHHHHHHHhccCCCeEEEEcceEE
Confidence 779999999999999999999999762111333 57799999998643 556678888887778999999999999
Q ss_pred cCC--CCcEEEEEecCChhHHHHHHHHHHHHHhc-C-----CCCCCCCCCCCeecceeecCCCCchhHHHHHHHHhhcCc
Q 031049 76 LPR--KNNLLCLLIAQSLNLRELHDNLYEALATK-G-----LQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKL 147 (166)
Q Consensus 76 F~~--~~~vl~l~~~~~~~L~~L~~~l~~~l~~~-g-----~~~~~~~~~~~f~PHiTLar~~~~~~~~~~~~~l~~~~~ 147 (166)
|++ +++|||+++ ++++|.+||++|++.+... | + ..+.++ |+|||||||...... + +.....
T Consensus 80 F~~~~~p~vl~l~v-~~~~L~~L~~~l~~~l~~~~g~~~~~~--~~~~~~--f~PHiTLar~~~~~~--~----l~~~l~ 148 (198)
T 1iuh_A 80 FPNEGTPRVWFAKA-EAEGFLRLAEGLRAGVEELLGEEAVRI--PGWDKP--FKPHITLARRKAPAP--R----VPPVLF 148 (198)
T ss_dssp ESSSSSCSEEEEEE-ECHHHHHHHHHHHHHHHHHHGGGGGGS--TTTTSC--CCCEEEEEEESSCCC--C----CCCCCC
T ss_pred CCCCCCCCEEEEEC-CCHHHHHHHHHHHHHHHHhcCCCcccc--cCCCCC--CCCcEEeEeccCcch--h----HHHhhc
Confidence 986 479999999 8899999999999999998 7 4 223344 999999998654332 1 111112
Q ss_pred CceEEEeEEEEEecC
Q 031049 148 PLQGDVEHVRLVQLP 162 (166)
Q Consensus 148 p~~~~v~~i~L~~~~ 162 (166)
+++|+|++|+||+|.
T Consensus 149 ~~~~~v~~~~L~~S~ 163 (198)
T 1iuh_A 149 GLEWPVEGFALVRSE 163 (198)
T ss_dssp CEEEEECEEEEEEEE
T ss_pred CceEEecEEEEEEEE
Confidence 669999999999986
No 3
>2d4g_A Hypothetical protein BSU11850; beta barrel, alpha helix, structural genomics, unknown function; 2.30A {Bacillus subtilis}
Probab=99.95 E-value=1.3e-27 Score=175.57 Aligned_cols=149 Identities=17% Similarity=0.260 Sum_probs=119.5
Q ss_pred CceEEEEecChhHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEeecCC-----CCChhhhhcccCCCcCceeEEEeeeee
Q 031049 1 MQYAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQP-----CSKPEDILPDSIPLVDKFPISLSLFSV 75 (166)
Q Consensus 1 m~~~i~l~~~~~~~~~i~~l~~~L~~~~~~~~~~~~~~~HiTL~~~~~-----~~~~~~~l~~~~~~~~~f~l~l~~~g~ 75 (166)
|=|||++.+|+++.+.|.++++++.. +.+ + .++||||+|.++ .+++.+++++++++.+||+++++|+|+
T Consensus 1 mR~Fiai~~~~~~~~~l~~~~~~~~~-~~~-~----v~pHiTL~f~g~~~~~~~~~l~~~l~~~~~~~~pf~l~l~~~g~ 74 (171)
T 2d4g_A 1 MKYGIVLFPSKKLQDLANSYRKRYDP-SYS-L----IPPHLTLRASFECAEEKADQLVSHLRNIAKESHPLVLKMTKYSS 74 (171)
T ss_dssp CEEEEEBCCCHHHHHHHHHHHHHHCG-GGG-T----SCSCBCCSSCEECCGGGHHHHHHHHHHHHHTCCCEEEEEEEEEE
T ss_pred CeEEEEEeCCHHHHHHHHHHHHHhCc-ccC-C----CCCeEEeecCCcCChHHHHHHHHHHHHHHccCCCEEEEECCcEE
Confidence 78999999999999999999999843 222 2 245999998542 566788888888788999999999999
Q ss_pred cCCCCcEEEEEecCChhHHHHHHHHHHHHHhcCCCCCCCCCCCCeecceeecCCCCchhHHHHHHHHhhcCcCceEEEeE
Q 031049 76 LPRKNNLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPTDRVGNVCNILAKVKLPLQGDVEH 155 (166)
Q Consensus 76 F~~~~~vl~l~~~~~~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~PHiTLar~~~~~~~~~~~~~l~~~~~p~~~~v~~ 155 (166)
|+++..|+|++++++++|.+||+++.+.+... .+.++ |+|||||||+.....+.++++.+.....+.+|+|++
T Consensus 75 F~~~~~vl~l~~~~~~~L~~L~~~l~~~~~~~-----~~~~~--f~PHiTLar~~~~~~~~~~~~~~~~~~~~~~~~v~~ 147 (171)
T 2d4g_A 75 FAPVNNVIYIKAEPTEELKTLNEKLYTGVLAG-----EQEYN--FVPHVTVGQNLSDDEHSDVLGQLKMQEVSHEEIVDR 147 (171)
T ss_dssp CTTTCCCEEEEECCCHHHHHHHHHTTSGGGCS-----CCCSC--CCCEEEEECSCCHHHHHHHHHHHTTSCCCEEEEECE
T ss_pred eCCCCcEEEEEccCChHHHHHHHHHHhccccc-----ccCCC--CCCeEEeecCCCHHHHHHHHHHhcCCCCceeEEECe
Confidence 98533499999998999999999999876541 22344 999999999887766777666654323467999999
Q ss_pred EEEEecC
Q 031049 156 VRLVQLP 162 (166)
Q Consensus 156 i~L~~~~ 162 (166)
|.||+|.
T Consensus 148 i~L~~s~ 154 (171)
T 2d4g_A 148 FHLLYQL 154 (171)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999983
No 4
>1jh6_A Cyclic phosphodiesterase; ADP-ribose 1'',2''-cyclic phosphate, RNA processing, 2',3'-C nucleotide phosphodiesterase, hydrolase; 1.80A {Arabidopsis thaliana} SCOP: d.61.1.1 PDB: 1fsi_A 1jh7_A*
Probab=99.94 E-value=3e-26 Score=171.60 Aligned_cols=150 Identities=13% Similarity=0.144 Sum_probs=119.2
Q ss_pred eEEEEecChhHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEeec--CCCCChhhhhcccCCCcCceeEEEeeeeecCCCC
Q 031049 3 YAIKLYFDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVT--QPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKN 80 (166)
Q Consensus 3 ~~i~l~~~~~~~~~i~~l~~~L~~~~~~~~~~~~~~~HiTL~~~--~~~~~~~~~l~~~~~~~~~f~l~l~~~g~F~~~~ 80 (166)
|++.+.+|+++++.|.++++.|+.... . .+.++||||.-. .+.+++.++|++++++.+||+++++|+|+|++.+
T Consensus 9 ~~f~~~pp~~~~~~l~~~~~~l~~~~~--~--~~~~~HiTLlG~~~~~~~~l~~~L~~~a~~~~pf~l~l~g~g~~~~~~ 84 (189)
T 1jh6_A 9 YSVWALPDEESEPRFKKLMEALRSEFT--G--PRFVPHVTVAVSAYLTADEAKKMFESACDGLKAYTATVDRVSTGTFFF 84 (189)
T ss_dssp EEEEEEECTTTHHHHHHHHHHHHHHHT--C--CCCCCCEEEEEEEEECHHHHHHHHHHHHHTCBCEEEEEEEEEEEEETT
T ss_pred EEEEEECCHHHHHHHHHHHHHHHHHcC--C--CCCCCEEEEeCCCCCCHHHHHHHHHHHHhhCCCeEEEEcceeccCccc
Confidence 889999999999999999999987422 1 457999999421 2266788999999888899999999999976678
Q ss_pred cEEEEEecCChhHHHHHHHHHHHHHhcCCCCCCCCCCCCeecceeecCCC-CchhHHHHHHHHhhc---CcCceEEEeEE
Q 031049 81 NLLCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSV-PTDRVGNVCNILAKV---KLPLQGDVEHV 156 (166)
Q Consensus 81 ~vl~l~~~~~~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~PHiTLar~~-~~~~~~~~~~~l~~~---~~p~~~~v~~i 156 (166)
+|||++++++++|.+||+++++. +|+ .. .++ |+|||||||.. ......++.+.++.. ....+|+|++|
T Consensus 85 rvlw~~v~~~~~L~~L~~~v~~~---~g~--~~-~~~--f~PHlTLar~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~ 156 (189)
T 1jh6_A 85 QCVFLLLQTTPEVMEAGEHCKNH---FNC--ST-TTP--YMPHLSLLYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRL 156 (189)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHH---TTC--CC-CSC--CCCEEEEECCCCCHHHHHHHHHHHHHHCTTCTTCEEEEEEE
T ss_pred eEEEEeecCCHHHHHHHHHHHHH---hCC--CC-CCC--CCCeEEEEEecCCHHHHHHHHHHHHhhccCCCCCcEEeeEE
Confidence 99999999889999999999986 463 33 244 99999999843 555555565655432 23468999999
Q ss_pred EEEecCCC
Q 031049 157 RLVQLPPN 164 (166)
Q Consensus 157 ~L~~~~p~ 164 (166)
.||+|++.
T Consensus 157 ~L~~s~~~ 164 (189)
T 1jh6_A 157 ALCKTDTE 164 (189)
T ss_dssp EEEECCTT
T ss_pred EEEEeCCC
Confidence 99999973
No 5
>2vfk_A AKAP18 delta; APO, hydrolase; HET: AMP; 1.50A {Homo sapiens} PDB: 2vfl_A* 2vfy_A
Probab=99.94 E-value=6.5e-27 Score=176.64 Aligned_cols=155 Identities=14% Similarity=0.179 Sum_probs=117.1
Q ss_pred CceEEEEecCh-hHHHHHHHHHHHHHHh--cC-CCCCCCCCCCeeEEeecCC-----CCChhhhhcccCCCc------Cc
Q 031049 1 MQYAIKLYFDD-ALKSKILDSMKLVREL--NI-PNLIKPEDEPHITLLVTQP-----CSKPEDILPDSIPLV------DK 65 (166)
Q Consensus 1 m~~~i~l~~~~-~~~~~i~~l~~~L~~~--~~-~~~~~~~~~~HiTL~~~~~-----~~~~~~~l~~~~~~~------~~ 65 (166)
|.|||++.+++ ++.+.|.++++.+... +. ..|+ .++++||||.|+++ ++++.++|++++... +|
T Consensus 3 ~r~Fial~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v-~~~~~HiTL~flg~~~~~~~~~l~~~l~~~~~~~~~~~~~~p 81 (205)
T 2vfk_A 3 PNYFLSIPITNKKITAGIKVLQNSILRQDNRLTKAMV-GDGSFHITLLVMQLLNEDEVNIGTDALLELKPFVEEILEGKH 81 (205)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHCGGGGGGBC-CTTCCEEEEEEECCCSHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHhcCcchHHHhC-CcCccEEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88999999997 8999999999999853 32 2343 67799999999754 455666776654333 89
Q ss_pred eeEEEeeeeecCCCCcEEEEEecCC---hhHHHHHHHHHHHHHhcCCCCCCCCCCCCeecceeecCCCCc---h-----h
Q 031049 66 FPISLSLFSVLPRKNNLLCLLIAQS---LNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPSVPT---D-----R 134 (166)
Q Consensus 66 f~l~l~~~g~F~~~~~vl~l~~~~~---~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~PHiTLar~~~~---~-----~ 134 (166)
|+++++|+|+|++ +|||++++++ +.|.+|+++|.+.+...|+. ..+.++ |+|||||||.... . .
T Consensus 82 f~l~l~g~~~F~~--~vl~~~v~~~~~~~~L~~L~~~l~~~~~~~g~~-~~~~~~--f~PHiTlar~~~~~~~~~~~~~~ 156 (205)
T 2vfk_A 82 LTLPFHGIGTFQG--QVGFVKLADGDHVSALLEIAETAKRTFQEKGIL-AGESRT--FKPHLTFMKLSKAPMLWKKGVRK 156 (205)
T ss_dssp CEEEEEEEEEETT--TEEEEEECCSHHHHHHHHHHHHHHHHHHTTTCC-BCCSSC--CCCCEEEEEGGGCHHHHHTTCSS
T ss_pred cEEEEechhhCCC--cEEEEeecccccHHHHHHHHHHHHHHHHHcCCC-cCCCCC--cceEEEEEecccchhhhhccccc
Confidence 9999999999987 7999999875 68999999999999998841 224455 9999999985432 1 1
Q ss_pred H-HHHHHHHhhcCcCceEEEeEEEEEecC
Q 031049 135 V-GNVCNILAKVKLPLQGDVEHVRLVQLP 162 (166)
Q Consensus 135 ~-~~~~~~l~~~~~p~~~~v~~i~L~~~~ 162 (166)
+ .++++.+.+ ....+|+|++|.||++.
T Consensus 157 ~~~~~l~~~~~-~~~~~~~v~~i~L~~~~ 184 (205)
T 2vfk_A 157 IEPGLYEQFID-HRFGEEILYQIDLCSML 184 (205)
T ss_dssp CCGGGGGGGTT-CEEEEEECCEEEEEESS
T ss_pred cCHHHHHHhcC-CcCcEEEeCEEEEEEcC
Confidence 2 133333332 12358999999999865
No 6
>2fsq_A ATU0111 protein; alpha-beta barrel, structural genomics, PSI, protein structu initiative, midwest center for structural genomics; HET: MSE; 1.40A {Agrobacterium tumefaciens str} SCOP: d.61.1.4
Probab=97.86 E-value=0.00018 Score=55.18 Aligned_cols=115 Identities=13% Similarity=0.115 Sum_probs=70.2
Q ss_pred eEEEEecCh--hHHHHHHHHHHHHHHhcC-CCCC-CCCCCCeeEEee--cC----------C---CC-------Chhhhh
Q 031049 3 YAIKLYFDD--ALKSKILDSMKLVRELNI-PNLI-KPEDEPHITLLV--TQ----------P---CS-------KPEDIL 56 (166)
Q Consensus 3 ~~i~l~~~~--~~~~~i~~l~~~L~~~~~-~~~~-~~~~~~HiTL~~--~~----------~---~~-------~~~~~l 56 (166)
|.|.-.+++ +..+++.+++++|++... ..+. -+.+-.|+||+= .+ + .. .+.+.+
T Consensus 43 nTvI~~l~~~s~~~~~l~~iq~~L~~~~~~~~~~~lPpsS~HMTvfdgv~e~~r~~~~wP~~L~~d~~l~~~~~~~~~~l 122 (243)
T 2fsq_A 43 NTVVCHLVEGSQTESAIVSTRQRFLDMPEASQLAFTPVSSLHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRL 122 (243)
T ss_dssp EEEEEEBCTTSHHHHHHHHHHHHHHTSGGGGGEEECCGGGCEEEEEEEEETTCCSTTSSCTTSCTTCCHHHHHHHHHHHG
T ss_pred CeEEEecCCCChHHHHHHHHHHHHHhccccCceeeCCchhhhhhhccccccccccCCCCCccCcccchHHHHHHHHHHHH
Confidence 344444444 457899999999997533 1121 377899999973 11 0 11 223355
Q ss_pred cccCCCcCceeEEEeeeeecCCCCcEEEEEecC-C--hhHHHHHHHHHHHHHhcCCCCCCCCCCCCeecceeecCC
Q 031049 57 PDSIPLVDKFPISLSLFSVLPRKNNLLCLLIAQ-S--LNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAPS 129 (166)
Q Consensus 57 ~~~~~~~~~f~l~l~~~g~F~~~~~vl~l~~~~-~--~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~PHiTLar~ 129 (166)
+... ...||.+.+.+++ + ..|-+.+.. . ..|.++.++|.+.+ |+..+ +.. .|+.|||||..
T Consensus 123 ~~~~-~~~p~~~~v~~l~--~---~~v~L~Pade~~~~~L~~~R~~l~q~l---Gi~~p-~hd--~y~fHITLgY~ 186 (243)
T 2fsq_A 123 STFP-TLPAFNMRVTGLR--P---VGMVMKGATAEDDSIVALWRDTFADFF---GYRHP-DHD--TYEFHITLSYI 186 (243)
T ss_dssp GGCC-CCCCCCEEEEEEE--T---TEEEEEESSHHHHHHHHHHHHHHHHHH---TCCCT-TGG--GCCEEEECEEE
T ss_pred hccc-CCCCeEEEEeccc--c---ceEEEecCCHHHHHHHHHHHHHHHHHh---CCCCC-CCc--ceEEEEEEEec
Confidence 5553 3488999999882 2 244454442 2 47888888887754 63222 222 39999999963
No 7
>2d4g_A Hypothetical protein BSU11850; beta barrel, alpha helix, structural genomics, unknown function; 2.30A {Bacillus subtilis}
Probab=94.20 E-value=0.2 Score=35.31 Aligned_cols=69 Identities=14% Similarity=0.238 Sum_probs=44.3
Q ss_pred EEEEecCChhHHHHHHHHHHHHHhcCCCCCCCCCCCCeecceeecC--CCCchhHHHHHHHHhhc---CcCceEEEeEEE
Q 031049 83 LCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWFPHCMLAP--SVPTDRVGNVCNILAKV---KLPLQGDVEHVR 157 (166)
Q Consensus 83 l~l~~~~~~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~PHiTLar--~~~~~~~~~~~~~l~~~---~~p~~~~v~~i~ 157 (166)
+|+++..++++.+.-.++.+.+.. + .+. +.|||||.- .++.+.+.++.+.++.. ..|++++++++.
T Consensus 3 ~Fiai~~~~~~~~~l~~~~~~~~~-~------~~~--v~pHiTL~f~g~~~~~~~~~l~~~l~~~~~~~~pf~l~l~~~g 73 (171)
T 2d4g_A 3 YGIVLFPSKKLQDLANSYRKRYDP-S------YSL--IPPHLTLRASFECAEEKADQLVSHLRNIAKESHPLVLKMTKYS 73 (171)
T ss_dssp EEEEBCCCHHHHHHHHHHHHHHCG-G------GGT--SCSCBCCSSCEECCGGGHHHHHHHHHHHHHTCCCEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhCc-c------cCC--CCCeEEeecCCcCChHHHHHHHHHHHHHHccCCCEEEEECCcE
Confidence 577777777766666666666532 1 232 778999984 45555555554444432 367899999988
Q ss_pred EEe
Q 031049 158 LVQ 160 (166)
Q Consensus 158 L~~ 160 (166)
.+.
T Consensus 74 ~F~ 76 (171)
T 2d4g_A 74 SFA 76 (171)
T ss_dssp ECT
T ss_pred EeC
Confidence 774
No 8
>1iuh_A 2'-5' RNA ligase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: d.61.1.2
Probab=93.76 E-value=0.18 Score=36.73 Aligned_cols=71 Identities=8% Similarity=0.002 Sum_probs=44.6
Q ss_pred EEEEecCChhHHHHHHHHHHHHHhcCCCCCCCCCCCCee----cceeecC--CCCchhHHHHHHHHhhc---CcCceEEE
Q 031049 83 LCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWF----PHCMLAP--SVPTDRVGNVCNILAKV---KLPLQGDV 153 (166)
Q Consensus 83 l~l~~~~~~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~----PHiTLar--~~~~~~~~~~~~~l~~~---~~p~~~~v 153 (166)
+|+++..++++.+.-.++.+.+.. + .. .+|+ |||||+- .++.+.+.++.+.+... ..|++.++
T Consensus 3 lFial~~p~~~~~~l~~~~~~l~~-~--~~-----~r~v~~~~~HiTL~flgev~~~~~~~l~~~l~~~~~~~~pf~l~l 74 (198)
T 1iuh_A 3 LFYAVFLPEEVRAALVEAQTKVRP-F--RG-----WKPVPPHQLHLTLLFLGERPEEELPDYLALGHRLARLEAPFRARL 74 (198)
T ss_dssp EEEEEECCHHHHHHHHHHHGGGTT-C--TT-----EEECCGGGCEEEEEEEEECCGGGHHHHHHHHHHHHHHSCCEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhhh-h--cC-----CcccCCCCCEEEEEeCCcCCHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 577777777665555555554432 1 10 1255 7999984 45666666555544432 46899999
Q ss_pred eEEEEEec
Q 031049 154 EHVRLVQL 161 (166)
Q Consensus 154 ~~i~L~~~ 161 (166)
+++..+..
T Consensus 75 ~g~g~F~~ 82 (198)
T 1iuh_A 75 RGTGYFPN 82 (198)
T ss_dssp EEEEEESS
T ss_pred cceEECCC
Confidence 99998865
No 9
>1vgj_A Hypothetical protein PH0099; alpha+beta, LIGT-like, structural genomics, ligase; 1.94A {Pyrococcus horikoshii} PDB: 1vdx_A 2fyh_A
Probab=92.42 E-value=0.37 Score=34.26 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=45.7
Q ss_pred EEEEecCChhHHHHHHHHHHHHHhcCCCCCCCCCCCCee-c---ceeecC--CCCchhHHHHHHHHhhc---CcCceEEE
Q 031049 83 LCLLIAQSLNLRELHDNLYEALATKGLQIDKEYVPGVWF-P---HCMLAP--SVPTDRVGNVCNILAKV---KLPLQGDV 153 (166)
Q Consensus 83 l~l~~~~~~~L~~L~~~l~~~l~~~g~~~~~~~~~~~f~-P---HiTLar--~~~~~~~~~~~~~l~~~---~~p~~~~v 153 (166)
+|+++..++++.+.-.++.+.+...+ . . .+|+ | ||||+- .++.+.+.++.+.+... ..|+++++
T Consensus 3 ~Fial~~p~~~~~~l~~~~~~l~~~~--~--~---~~~v~~~~lHiTL~flg~~~~~~~~~l~~~l~~~~~~~~pf~l~l 75 (184)
T 1vgj_A 3 AFIAIDVNESVRDSLVRAQDYIGSKE--A--K---IKFVERENLHITLKFLGEITEEQAEEIKNILKKIAEKYKKHEVKV 75 (184)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHCSSS--E--E---EEECCGGGCEEEEEEEESCCHHHHHHHHHHHHHHHTTSBCEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHHHHhhcC--C--C---cEecCccccEEEEEeecCCCHHHHHHHHHHHHHHHccCCCeEEEE
Confidence 57777777776666666666664321 0 1 1254 4 999984 56666666555555432 36889999
Q ss_pred eEEEEEec
Q 031049 154 EHVRLVQL 161 (166)
Q Consensus 154 ~~i~L~~~ 161 (166)
+++..+..
T Consensus 76 ~g~g~F~~ 83 (184)
T 1vgj_A 76 KGIGVFPN 83 (184)
T ss_dssp EEEEEEEC
T ss_pred eeEeeCCC
Confidence 99998864
No 10
>2vfk_A AKAP18 delta; APO, hydrolase; HET: AMP; 1.50A {Homo sapiens} PDB: 2vfl_A* 2vfy_A
Probab=91.05 E-value=0.91 Score=32.83 Aligned_cols=72 Identities=14% Similarity=0.055 Sum_probs=42.7
Q ss_pred EEEEEecCCh-hHHHHHHHHHHHHHhc--CCCCCCCCCCCCeec----ceeec--CCCCchhHHHHHHHHhhc---C---
Q 031049 82 LLCLLIAQSL-NLRELHDNLYEALATK--GLQIDKEYVPGVWFP----HCMLA--PSVPTDRVGNVCNILAKV---K--- 146 (166)
Q Consensus 82 vl~l~~~~~~-~L~~L~~~l~~~l~~~--g~~~~~~~~~~~f~P----HiTLa--r~~~~~~~~~~~~~l~~~---~--- 146 (166)
.+|+++..++ ++.+--.++.+.+... | .. .+|+| ||||+ -.++.+.+.++.+.+... .
T Consensus 4 r~Fial~~~~~~~~~~l~~~~~~l~~~~~~--~~-----~~~v~~~~~HiTL~flg~~~~~~~~~l~~~l~~~~~~~~~~ 76 (205)
T 2vfk_A 4 NYFLSIPITNKKITAGIKVLQNSILRQDNR--LT-----KAMVGDGSFHITLLVMQLLNEDEVNIGTDALLELKPFVEEI 76 (205)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHHHHHCGG--GG-----GGBCCTTCCEEEEEEECCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHhcCcc--hH-----HHhCCcCccEEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4677776553 5555555555555421 2 10 12554 99998 355666666665555442 1
Q ss_pred ---cCceEEEeEEEEEe
Q 031049 147 ---LPLQGDVEHVRLVQ 160 (166)
Q Consensus 147 ---~p~~~~v~~i~L~~ 160 (166)
.|++++++++..+.
T Consensus 77 ~~~~pf~l~l~g~~~F~ 93 (205)
T 2vfk_A 77 LEGKHLTLPFHGIGTFQ 93 (205)
T ss_dssp TTTSCCEEEEEEEEEET
T ss_pred hCCCCcEEEEechhhCC
Confidence 57899999988775
No 11
>1jh6_A Cyclic phosphodiesterase; ADP-ribose 1'',2''-cyclic phosphate, RNA processing, 2',3'-C nucleotide phosphodiesterase, hydrolase; 1.80A {Arabidopsis thaliana} SCOP: d.61.1.1 PDB: 1fsi_A 1jh7_A*
Probab=89.52 E-value=1.4 Score=31.72 Aligned_cols=44 Identities=16% Similarity=0.113 Sum_probs=26.4
Q ss_pred eecceeecCCCCc--hhHHHHHHHHhhcCcCceEEEeEEEEEecCC
Q 031049 120 WFPHCMLAPSVPT--DRVGNVCNILAKVKLPLQGDVEHVRLVQLPP 163 (166)
Q Consensus 120 f~PHiTLar~~~~--~~~~~~~~~l~~~~~p~~~~v~~i~L~~~~p 163 (166)
+.|||||.-.... +++.+.++.+.....|++.++++++-....|
T Consensus 39 ~~~HiTLlG~~~~~~~~l~~~L~~~a~~~~pf~l~l~g~g~~~~~~ 84 (189)
T 1jh6_A 39 FVPHVTVAVSAYLTADEAKKMFESACDGLKAYTATVDRVSTGTFFF 84 (189)
T ss_dssp CCCCEEEEEEEEECHHHHHHHHHHHHHTCBCEEEEEEEEEEEEETT
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHhhCCCeEEEEcceeccCccc
Confidence 8999999532222 3333444444322468899999988744444
No 12
>2fsq_A ATU0111 protein; alpha-beta barrel, structural genomics, PSI, protein structu initiative, midwest center for structural genomics; HET: MSE; 1.40A {Agrobacterium tumefaciens str} SCOP: d.61.1.4
Probab=67.08 E-value=3.4 Score=31.37 Aligned_cols=75 Identities=11% Similarity=-0.030 Sum_probs=43.0
Q ss_pred EEEEec-ChhHHHHHHHHHHHHHHh-cCCCCCCCCCCCeeEEeecCC------CCChhhhh----cccCCCcCceeEEEe
Q 031049 4 AIKLYF-DDALKSKILDSMKLVREL-NIPNLIKPEDEPHITLLVTQP------CSKPEDIL----PDSIPLVDKFPISLS 71 (166)
Q Consensus 4 ~i~l~~-~~~~~~~i~~l~~~L~~~-~~~~~~~~~~~~HiTL~~~~~------~~~~~~~l----~~~~~~~~~f~l~l~ 71 (166)
+|.+.+ |++..++|+++.+.|.+. |+..--...-.+||||....+ ...+...+ +.+++..+.+.|.--
T Consensus 142 ~v~L~Pade~~~~~L~~~R~~l~q~lGi~~p~hd~y~fHITLgY~~~~l~~ee~~~~~~~l~~~~~~l~~~~p~i~l~~~ 221 (243)
T 2fsq_A 142 GMVMKGATAEDDSIVALWRDTFADFFGYRHPDHDTYEFHITLSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPP 221 (243)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTCCCTTGGGCCEEEECEEESSCBCGGGHHHHHHHHHHHHHHHHHHCSSCCBCCC
T ss_pred eEEEecCCHHHHHHHHHHHHHHHHHhCCCCCCCcceEEEEEEEeccCCCCHHHHHHHHHHHHHHHHHHHhhCCeeeecCc
Confidence 456654 556799999999999985 552110134589999986321 12222333 323223455566555
Q ss_pred eeeecCC
Q 031049 72 LFSVLPR 78 (166)
Q Consensus 72 ~~g~F~~ 78 (166)
.+..|..
T Consensus 222 efc~F~D 228 (243)
T 2fsq_A 222 AFCEFKD 228 (243)
T ss_dssp EEEEESS
T ss_pred ceEEeCC
Confidence 5666653
No 13
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=42.17 E-value=28 Score=16.33 Aligned_cols=16 Identities=25% Similarity=0.339 Sum_probs=12.6
Q ss_pred hhHHHHHHHHHHHHHH
Q 031049 11 DALKSKILDSMKLVRE 26 (166)
Q Consensus 11 ~~~~~~i~~l~~~L~~ 26 (166)
+++...+.++|++|+.
T Consensus 4 delykeledlqerlrk 19 (27)
T 3twe_A 4 DELYKELEDLQERLRK 19 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5677888888888875
No 14
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=40.38 E-value=34 Score=22.07 Aligned_cols=69 Identities=13% Similarity=0.208 Sum_probs=47.5
Q ss_pred ceEEEEecChhHHHHHHHHHHHHHHhcC-CCCCCCCCCCee----EEeecC--C---CCChhhhhcccCCCcCceeEEEe
Q 031049 2 QYAIKLYFDDALKSKILDSMKLVRELNI-PNLIKPEDEPHI----TLLVTQ--P---CSKPEDILPDSIPLVDKFPISLS 71 (166)
Q Consensus 2 ~~~i~l~~~~~~~~~i~~l~~~L~~~~~-~~~~~~~~~~Hi----TL~~~~--~---~~~~~~~l~~~~~~~~~f~l~l~ 71 (166)
+|-|.+.+.++....+.++-+.|.+.|+ -.+.+...+||- |..+.. + +.++.+.|.+.+-+ ..++|.+.
T Consensus 11 ~YVVTf~y~e~~Lt~~~eL~~~lt~aGF~ttl~D~~G~pHeLgtNsFgliS~l~~~ev~~La~~L~e~Alg-~~pev~v~ 89 (100)
T 2llz_A 11 TYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPD-IDFDLNIM 89 (100)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHHHTTEESEEECSSSCEEECTTTEEEECCCSCHHHHHHHHHHGGGTSSC-CCCEEEEE
T ss_pred EEEEEEEecccchHHHHHHHHHHHhCCceeEeecCCCCceeccccceeeeccCCHHHHHHHHHHHHHhhcC-CCCceeEe
Confidence 6889999999999999999999999988 444456678885 443322 2 55566666555532 34455544
No 15
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=37.41 E-value=30 Score=21.08 Aligned_cols=56 Identities=9% Similarity=0.030 Sum_probs=37.9
Q ss_pred cChhHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEeecCC------CCChhhhhcccCCCcCceeEEEeee
Q 031049 9 FDDALKSKILDSMKLVRELNIPNLIKPEDEPHITLLVTQP------CSKPEDILPDSIPLVDKFPISLSLF 73 (166)
Q Consensus 9 ~~~~~~~~i~~l~~~L~~~~~~~~~~~~~~~HiTL~~~~~------~~~~~~~l~~~~~~~~~f~l~l~~~ 73 (166)
-..+++++++++-+.|++.|-+ |..||+....| ++.+...|+.+ +...+.++++|.
T Consensus 27 tgkeleralqelekalaragar-------nvqitisaendeqakelleliarllqkl--gykdinvrvngt 88 (96)
T 2jvf_A 27 TGKELERALQELEKALARAGAR-------NVQITISAENDEQAKELLELIARLLQKL--GYKDINVRVNGT 88 (96)
T ss_dssp SSSHHHHHHHHHHHHHHHHTCS-------EEEEEEECSSHHHHHHHHHHHHHHHHHH--TCSEEEEEEETT
T ss_pred ccHHHHHHHHHHHHHHHhcccc-------ceEEEEEecChHHHHHHHHHHHHHHHHh--CCCceEEEEcCE
Confidence 4568899999999999988742 67899976543 23333444444 566777777653
No 16
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=28.59 E-value=67 Score=16.58 Aligned_cols=24 Identities=4% Similarity=0.194 Sum_probs=19.2
Q ss_pred CceEEEEecChhHHHHHHHHHHHH
Q 031049 1 MQYAIKLYFDDALKSKILDSMKLV 24 (166)
Q Consensus 1 m~~~i~l~~~~~~~~~i~~l~~~L 24 (166)
|.--+.+.+|+++.++|.++....
T Consensus 1 Mk~ritv~l~~~l~~~Ld~~a~~~ 24 (45)
T 2cpg_A 1 MKKRLTITLSESVLENLEKMAREM 24 (45)
T ss_dssp CEEEEEEEEEHHHHHHHHHHHHHH
T ss_pred CCceEEEecCHHHHHHHHHHHHHH
Confidence 666788899999999998876653
No 17
>3sxu_A DNA polymerase III subunit CHI; DNA replication, CHI binds to SSB and PSI, transferase; HET: DNA; 1.85A {Escherichia coli} SCOP: c.128.1.1 PDB: 1em8_A*
Probab=26.19 E-value=33 Score=23.74 Aligned_cols=13 Identities=15% Similarity=0.355 Sum_probs=9.5
Q ss_pred CCCCeecceeecC
Q 031049 116 VPGVWFPHCMLAP 128 (166)
Q Consensus 116 ~~~~f~PHiTLar 128 (166)
++++|.||.+.+-
T Consensus 63 ~~~sFlPH~~~~~ 75 (150)
T 3sxu_A 63 PAESFVPHNLAGE 75 (150)
T ss_dssp STTCCCCEEETTC
T ss_pred CCCcccCCccCCC
Confidence 4556999997663
No 18
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=22.78 E-value=73 Score=18.43 Aligned_cols=22 Identities=5% Similarity=0.224 Sum_probs=18.7
Q ss_pred ceEEEEecChhHHHHHHHHHHH
Q 031049 2 QYAIKLYFDDALKSKILDSMKL 23 (166)
Q Consensus 2 ~~~i~l~~~~~~~~~i~~l~~~ 23 (166)
.|+|.++|++|--+.++.+.++
T Consensus 15 ~~~Vs~Y~SkEey~~L~klA~e 36 (66)
T 2k1o_A 15 NFSVTFYLSKEEHDVLRRLADE 36 (66)
T ss_dssp CEEEEEEEEHHHHHHHHHHHHT
T ss_pred ceEEEEEecHHHHHHHHHHHHH
Confidence 4889999999999988887665
No 19
>2wny_A MTH_689, conserved protein MTH689; unknown function, exosome superoperon; 1.95A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.33 E-value=1.3e+02 Score=20.43 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=42.2
Q ss_pred CCeeEEee---c-CCCCChhhhhcccCCCcCceeEEEeeeeecCCCCcEEEEEec--CChhHHHHHHHHHHHHHhc
Q 031049 38 EPHITLLV---T-QPCSKPEDILPDSIPLVDKFPISLSLFSVLPRKNNLLCLLIA--QSLNLRELHDNLYEALATK 107 (166)
Q Consensus 38 ~~HiTL~~---~-~~~~~~~~~l~~~~~~~~~f~l~l~~~g~F~~~~~vl~l~~~--~~~~L~~L~~~l~~~l~~~ 107 (166)
--+|++.. . +|.+.+.++|..+...-.+ -.-..-|.|++ ++..+... ....+..+++.|.+.+...
T Consensus 8 ~~~V~i~a~v~~TED~eKV~~Al~nifp~~~~--~~~~~~G~~gn--~I~il~~~~~~~~~~~~~~~~l~~~ld~~ 79 (141)
T 2wny_A 8 IHNISYCLMVYGTEDEEKVIEALRNVIPGATP--ERESAEGYHGN--PITVLRGRLDRRRALREFMEKFTEVFRGR 79 (141)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHTTTSTTCCC--EEEEEECGGGC--EEEEEEEEECCHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEEEEEEcCCCCHHHHHHHHHHhCCcccc--eeEEeccccCC--ceEEEEEEecCcHHHHHHHHHHHHHHHHH
Confidence 34566643 2 3488899999988743212 23444577876 55555544 3478999999999886553
No 20
>4h3w_A Hypothetical protein; two beta barrel domains, secreted protein, orfan, structural genomics, joint center for structural genomics; HET: MLY; 1.87A {Parabacteroides distasonis}
Probab=20.44 E-value=1.3e+02 Score=22.03 Aligned_cols=10 Identities=50% Similarity=0.694 Sum_probs=8.1
Q ss_pred CCCCeeEEee
Q 031049 36 EDEPHITLLV 45 (166)
Q Consensus 36 ~~~~HiTL~~ 45 (166)
-.||||||..
T Consensus 94 ltnphitl~s 103 (330)
T 4h3w_A 94 LTNPHITLXS 103 (330)
T ss_dssp BSCCEEEEEE
T ss_pred ecCCcEEeec
Confidence 3599999975
Done!