BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031053
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum
lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/166 (92%), Positives = 158/166 (95%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 60
MLGA GAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAE
Sbjct: 108 MLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAE 167
Query: 61 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVK 120
HRRFQDWA PGSMG+QYFLG EK LGGSGDPAYPGGPLFNPLG GKDEKSMK+ KLKE+K
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227
Query: 121 NGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 166
NGRLAMLAILGYF+Q LVTGVGPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum
GN=lhca3 PE=1 SV=1
Length = 275
Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/166 (90%), Positives = 156/166 (93%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 60
MLGAVGAIAPE LGK GLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAE
Sbjct: 110 MLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAE 169
Query: 61 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVK 120
HRRFQDWA PGSMG+QYFLG EK GGSG+PAYPGGP FNPLG GKDEKS+K+ KLKEVK
Sbjct: 170 HRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVK 229
Query: 121 NGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 166
NGRLAMLAILGYF+QGLVTGVGPYQNLLDH+ADPVNNNVLTSLKFH
Sbjct: 230 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis
thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 94/163 (57%), Gaps = 16/163 (9%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 60
MLG G + PE+ K G+I W+ AG Y+A TLFV+E L + E
Sbjct: 104 MLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIEFILFHYVE 154
Query: 61 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVK 120
RR+QD NPGS+ + F++Y G+ YPGG +FNPL +++ K KE+
Sbjct: 155 IRRWQDIKNPGSVNQDPI--FKQYSLPKGEVGYPGG-IFNPLNFAPTQEA----KEKELA 207
Query: 121 NGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSL 163
NGRLAMLA LG+ VQ VTG GP++NLL HL+DP +N ++ +
Sbjct: 208 NGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 83 KYLGGSGDPAYPGGPL-----FNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGL 137
++L G P Y G L F+PLGL +D +++K F E+ NGR AML + G + +
Sbjct: 56 EWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEV 115
Query: 138 VTGVG 142
T +G
Sbjct: 116 FTKIG 120
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum
lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 91/165 (55%), Gaps = 12/165 (7%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 60
MLGA G PE+L K G++ +W+ AG Y+ D TLF++E+ L+G+AE
Sbjct: 115 MLGAAGIFIPELLTKIGIL---NTPSWYT------AGEQEYFTDTTTLFIVELVLIGWAE 165
Query: 61 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS-MKDFKLKEV 119
RR+ D PG + K G D YPGG F+PLG G + +K+ + KE+
Sbjct: 166 GRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPAKIKELRTKEI 223
Query: 120 KNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLK 164
KNGRLAMLA++G + Q + TG GP NL HLADP + + +
Sbjct: 224 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 90 DPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVG 142
D + PG F+PLGL D +S++ + E+ + R AML G F+ L+T +G
Sbjct: 79 DGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIG 131
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida
PE=2 SV=1
Length = 270
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 12/165 (7%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 60
MLGA G PE L K G++ +W+ AG Y+ D TLFV+E+ L+G+AE
Sbjct: 115 MLGAAGIFIPEFLTKIGVL---NTPSWYT------AGEQEYFTDTTTLFVIELVLIGWAE 165
Query: 61 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS-MKDFKLKEV 119
RR+ D PG + K G D YPGG F+PLG G + +K+ + KE+
Sbjct: 166 GRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPAKIKELRTKEI 223
Query: 120 KNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLK 164
KNGRLAMLA++G + Q + TG GP NL HLADP + + +
Sbjct: 224 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 90 DPAYPGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVG 142
D + PG F+PLGLG D +S+K E+ + R AML G F+ +T +G
Sbjct: 79 DGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIG 131
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum
GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 16/163 (9%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 60
MLG G + PE+ G+I W+ AG Y+A TLFV+E L + E
Sbjct: 103 MLGVAGMLLPEVFTSIGII---NVPKWYA------AGKEEYFASSSTLFVIEFILSHYVE 153
Query: 61 HRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSMKDFKLKEVK 120
RR+QD NPGS+ + F++Y +G+ YPGG +FNPL ++ K KE+
Sbjct: 154 IRRWQDIKNPGSVNQDPI--FKQYSLPAGEVGYPGG-IFNPLNFAPTLEA----KEKEIA 206
Query: 121 NGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSL 163
NGRLAMLA LG+ +Q VTG GP+ NLL H++DP +N ++ +L
Sbjct: 207 NGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTL 249
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 83 KYLGGSGDPAY-----PGGPLFNPLGLGKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGL 137
++L G P Y PG F+PLGL +D ++++ F E+ NGR AML + G + +
Sbjct: 55 EWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEV 114
Query: 138 VTGVG 142
T +G
Sbjct: 115 FTSIG 119
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 93/170 (54%), Gaps = 28/170 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 164
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R + LG DP YPGG F+PLGL +D ++
Sbjct: 165 QVVLMGAVEGYRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEAF 207
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLT 161
+ K+KE+KNGRLAM ++ G+FVQ LVTG GP +NL DHLADPVNNN +
Sbjct: 208 AELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWS 257
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 115 MLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWAC 172
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL +D ++
Sbjct: 173 QVILMGAVEGYRIA--GGP--------------LGEVTDPIYPGGS-FDPLGLAEDPEAF 215
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 216 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 263
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 90/167 (53%), Gaps = 28/167 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PEIL K G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAC 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMGF E R P LG DP YPGG F+PLGL D +
Sbjct: 164 QVVLMGFVEGYRVG--GGP--------------LGEGLDPIYPGGA-FDPLGLADDPDAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 158
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL +D ++
Sbjct: 164 QVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 254
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAV--WFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R + LG DP YPGG F+PLGL +D ++
Sbjct: 166 QVVLMGAVEGYRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 256
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL +D ++
Sbjct: 166 QVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 256
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 28/170 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 164
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL +D ++
Sbjct: 165 QVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAF 207
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLT 161
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN +
Sbjct: 208 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 257
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 28/170 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+ + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELFARNGIKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL +D ++
Sbjct: 166 QVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLAEDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLT 161
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN +
Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 166 QVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 256
>sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max
GN=CAB2 PE=3 SV=1
Length = 256
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 97 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAT 154
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D +++
Sbjct: 155 QVILMGAVEGYRIA--GGP--------------LGEVTDPIYPGGS-FDPLGLADDPEAL 197
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 198 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 245
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 89/168 (52%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y P ++
Sbjct: 119 MLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWAC 176
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D +
Sbjct: 177 QVILMGAIEGYRVA--GGP--------------LGEVTDPIYPGGN-FDPLGLADDPDAF 219
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
D K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 220 ADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 267
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ +
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAV 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 164 QVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGG-AFDPLGLADDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 254
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 90/168 (53%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L K+G+ E WF+ G I G +Y +P ++
Sbjct: 109 MLGALGCLTPELLAKSGVKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWAC 166
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D +
Sbjct: 167 QVVLMGAVEGYRVA--GGP--------------LGEVTDPIYPGGS-FDPLGLADDPDTF 209
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN
Sbjct: 210 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNA 257
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 90/168 (53%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G Y +P ++
Sbjct: 105 MLGALGCVFPELLARNGVKFGEAV--WFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWAC 162
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 163 QVVLMGAVEGYRVA--GGP--------------LGEVVDPLYPGGS-FDPLGLADDAEAF 205
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ +
Sbjct: 102 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAV 159
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 160 QVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAF 202
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 203 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 250
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 166 QVVLMGAIEGYRVA--GGP--------------LGEVTDPLYPGGS-FDPLGLADDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP NL+DHLADPVNNN
Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNA 256
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAC 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 164 QVVLMGAIEGYRVAG----GPLGEVV------------DPLYPGG-TFDPLGLADDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
D K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 207 ADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 254
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 92/170 (54%), Gaps = 28/170 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 166 QVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLT 161
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN +
Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL +D ++
Sbjct: 164 QVILMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 254
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 166 QVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 209 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 256
>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type 1 (Fragment)
OS=Cucumis sativus PE=2 SV=1
Length = 206
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 47 MLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 104
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 105 QVVLMGAVEGYRIA--GGP--------------LGEVTDPIYPGGS-FDPLGLADDPEAF 147
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 148 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 195
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 96 MLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 153
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 154 QVVLMGAVEGYRIA--GGP--------------LGEVTDPIYPGGS-FDPLGLADDPEAF 196
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 197 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 244
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 28/170 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 165
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL +D ++
Sbjct: 166 QVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLAEDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLT 161
+ K+K +KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN +
Sbjct: 209 AELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 89/168 (52%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y P ++
Sbjct: 119 MLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWAC 176
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D +
Sbjct: 177 QVILMGAIEGYRVA--GGP--------------LGEVTDPIYPGGN-FDPLGLADDPDAF 219
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 220 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 267
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 27/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAT 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R + E LG + D YPGG F+PLGL D ++
Sbjct: 164 QVILMGAVEGYR---------------VAGEGPLGEAEDLLYPGGS-FDPLGLATDPEAF 207
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 208 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 255
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 90/168 (53%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+ + G+ E WF+ G I G +Y +P ++
Sbjct: 107 MLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 164
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 165 QVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEAF 207
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 208 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 255
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 92/170 (54%), Gaps = 28/170 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 110 MLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAT 167
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 168 QVILMGAVEGYRIA--GGP--------------LGEVVDPLYPGGS-FDPLGLADDPEAF 210
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLT 161
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN +
Sbjct: 211 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 260
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 90/168 (53%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PEIL K G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAA 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMGF E R P LG D YPGG F+PLGL D ++
Sbjct: 164 QVVLMGFVEGYRVG--GGP--------------LGEGLDKIYPGGA-FDPLGLADDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNA 254
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P +++
Sbjct: 105 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWAT 162
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL +D +
Sbjct: 163 QVILMGAVEGYRVAG----GPLGEIV------------DPLYPGGS-FDPLGLAEDPERS 205
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 206 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 253
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 103 MLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAC 160
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 161 QVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAF 203
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPVNNN
Sbjct: 204 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNA 251
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 90/168 (53%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G I PE+L K G+ Q WF+ G I G +Y +P ++
Sbjct: 105 MLGALGCIFPELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAT 162
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 163 QVVLMGLIEGYRVG--GGP--------------LGEGLDPLYPGGA-FDPLGLADDPEAF 205
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 206 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNA 253
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 90/167 (53%), Gaps = 28/167 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +
Sbjct: 104 MLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAV 161
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMGF E R P LG D YPGG F+PLGL D +
Sbjct: 162 QVVLMGFVEGYRVG--GGP--------------LGEGLDKVYPGGA-FDPLGLADDPDTF 204
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 158
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 205 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 90/167 (53%), Gaps = 28/167 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +
Sbjct: 104 MLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAV 161
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMGF E R P LG D YPGG F+PLGL D +
Sbjct: 162 QVVLMGFVEGYRVG--GGP--------------LGEGLDKVYPGGA-FDPLGLADDPDTF 204
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 158
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 205 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 28/170 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 109 MLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAT 166
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 167 QVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAF 209
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLT 161
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHL+DPVNNN +
Sbjct: 210 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWS 259
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 89/168 (52%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G PE+L K G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCTFPELLEKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWAT 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMGF E R P LG DP YPGG F+PLGL D S
Sbjct: 164 QVVLMGFVEGYRVG--GGP--------------LGEGLDPLYPGG-AFDPLGLADDPDSF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP QNL DH+ADPV NN
Sbjct: 207 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNA 254
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 90/168 (53%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PEIL K G+ E WF+ G I G +Y +P ++
Sbjct: 78 MLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAS 135
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMGF E R P LG D YPGG F+PLGL D ++
Sbjct: 136 QVVLMGFVEGYRVG--GGP--------------LGEGLDKIYPGGA-FDPLGLADDPEAF 178
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 179 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNA 226
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 93/172 (54%), Gaps = 27/172 (15%)
Query: 1 MLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FV 50
+LGA+G + PE+L + AG+ Q WF+ G I G NY + +
Sbjct: 91 LLGALGILTPELLSQYAGV--QFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLA 148
Query: 51 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKS 110
+++ LMG AE R AN GS G FL D YPGGP F+PLGL D +
Sbjct: 149 VQVVLMGLAEAYR----ANGGSEG---FLD-------DLDTLYPGGP-FDPLGLADDPDT 193
Query: 111 MKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTS 162
+ K+KE+KNGRLAM + LG+FVQ +VTG GP QNL DHLADP N S
Sbjct: 194 FAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFAS 245
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L K GL E WF+ G I G +Y +P ++
Sbjct: 107 MLGALGCVFPELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWAC 164
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G++G DP PGG F+PLGL D ++
Sbjct: 165 QVVLMGLIEGYRV----GGGTLGEGL------------DPLLPGGA-FDPLGLADDPEAC 207
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN
Sbjct: 208 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNA 255
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAC 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 164 QVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+K GRLAML++ G+FVQ +VTG GP +NL DH+ADPVNNN
Sbjct: 207 GELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNA 254
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 90/167 (53%), Gaps = 28/167 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+ + G+ E WF+ G I G +Y +P ++
Sbjct: 107 MLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWAC 164
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R G +G DP YPGG F+PLGL D ++
Sbjct: 165 QVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEAF 207
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 158
+ ++KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 208 AELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 28/167 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVL 51
MLGA+G + PEIL K G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWAC 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMGF E R P LG D YPGG F+PLGL D ++
Sbjct: 164 QVVLMGFVEGYRVG--GGP--------------LGEGLDKIYPGGA-FDPLGLADDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 158
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ DPV NN
Sbjct: 207 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 89/168 (52%), Gaps = 28/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L K G+ E WF+ G I G +Y +P ++
Sbjct: 106 MLGALGCVTPELLAKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWAC 163
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R P LG DP YPGG F+PLGL D ++
Sbjct: 164 QVILMGAVEGYRVA--GGP--------------LGEVEDPIYPGGS-FDPLGLADDPEAF 206
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADP NN
Sbjct: 207 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNA 254
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 27/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWAT 164
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R A G +G + D YPGG F+PLGL D ++
Sbjct: 165 QVILMGAVEGYRV---AGNGPLGE------------AEDLLYPGGS-FDPLGLATDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 209 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 256
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 27/168 (16%)
Query: 1 MLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVL 51
MLGA+G + PE+L + G+ E WF+ G I G +Y +P ++
Sbjct: 107 MLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWAT 164
Query: 52 EMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLGKDEKSM 111
++ LMG E R A G +G + D YPGG F+PLGL D ++
Sbjct: 165 QVILMGAVEGYRV---AGNGPLGE------------AEDLLYPGGS-FDPLGLATDPEAF 208
Query: 112 KDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNV 159
+ K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN
Sbjct: 209 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.143 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,281,690
Number of Sequences: 539616
Number of extensions: 3333251
Number of successful extensions: 7095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6739
Number of HSP's gapped (non-prelim): 252
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)