Your job contains 1 sequence.
>031057
MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031057
(166 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171397 - symbol:AT5G16450 species:3702 "Arabi... 758 3.5e-75 1
TAIR|locus:2075432 - symbol:AT3G02770 species:3702 "Arabi... 751 1.9e-74 1
TAIR|locus:2156430 - symbol:AT5G56260 species:3702 "Arabi... 637 2.3e-62 1
UNIPROTKB|P0A8R0 - symbol:rraA "ribonuclease E inhibitor ... 336 1.8e-30 1
TIGR_CMR|SO_4197 - symbol:SO_4197 "S-adenosylmethionine:2... 335 2.3e-30 1
UNIPROTKB|Q47VZ9 - symbol:rraA "Regulator of ribonuclease... 316 2.4e-28 1
TIGR_CMR|CPS_4374 - symbol:CPS_4374 "protein of unknown f... 316 2.4e-28 1
UNIPROTKB|P0A666 - symbol:rraA "Putative regulator of rib... 309 1.3e-27 1
TIGR_CMR|SO_2567 - symbol:SO_2567 "S-adenosylmethionine:2... 304 4.5e-27 1
UNIPROTKB|Q489G8 - symbol:CPS_0538 "Putative uncharacteri... 294 5.2e-26 1
TIGR_CMR|CPS_0538 - symbol:CPS_0538 "protein of unknown f... 294 5.2e-26 1
UNIPROTKB|Q48I30 - symbol:PSPPH_2762 "Uncharacterized pro... 144 4.1e-10 1
ASPGD|ASPL0000032745 - symbol:AN10700 species:162425 "Eme... 122 3.1e-07 1
UNIPROTKB|Q48JQ1 - symbol:PSPPH_2160 "Uncharacterized pro... 115 1.2e-05 1
UNIPROTKB|Q880F6 - symbol:PSPTO_3204 "Uncharacterized pro... 115 1.2e-05 1
UNIPROTKB|Q9AQI0 - symbol:proA "4-hydroxy-4-methyl-2-oxog... 109 8.9e-05 1
UNIPROTKB|Q88JX9 - symbol:galC "4-carboxy-4-hydroxy-2-oxo... 104 0.00051 1
>TAIR|locus:2171397 [details] [associations]
symbol:AT5G16450 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008428 "ribonuclease
inhibitor activity" evidence=IEA] [GO:0051252 "regulation of RNA
metabolic process" evidence=IEA] InterPro:IPR010203 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB005242 GO:GO:0008428
UniGene:At.20374 eggNOG:COG0684 Gene3D:3.50.30.40
InterPro:IPR005493 Pfam:PF03737 SUPFAM:SSF89562 GO:GO:0051252
HOGENOM:HOG000252803 ProtClustDB:CLSN2685213 TIGRFAMs:TIGR01935
EMBL:AK118745 EMBL:BT005566 EMBL:AY085206 IPI:IPI00522739
RefSeq:NP_197149.1 RefSeq:NP_850830.1 ProteinModelPortal:Q9FFE0
SMR:Q9FFE0 IntAct:Q9FFE0 STRING:Q9FFE0 PaxDb:Q9FFE0 PRIDE:Q9FFE0
DNASU:831506 EnsemblPlants:AT5G16450.1 EnsemblPlants:AT5G16450.2
GeneID:831506 KEGG:ath:AT5G16450 TAIR:At5g16450 InParanoid:Q9FFE0
OMA:ELCDIYH PhylomeDB:Q9FFE0 Genevestigator:Q9FFE0
GermOnline:AT5G16450 Uniprot:Q9FFE0
Length = 166
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 142/166 (85%), Positives = 156/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN +LI SG+LRALQPIFQIYGRRQ+FSGP+VT+KVFEDN LIR+F+EE
Sbjct: 1 MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA+KKG+GE+ VP+ I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166
>TAIR|locus:2075432 [details] [associations]
symbol:AT3G02770 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008428 "ribonuclease
inhibitor activity" evidence=IEA] [GO:0051252 "regulation of RNA
metabolic process" evidence=IEA] InterPro:IPR010203 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008428 EMBL:AC018363
eggNOG:COG0684 Gene3D:3.50.30.40 InterPro:IPR005493 Pfam:PF03737
SUPFAM:SSF89562 GO:GO:0051252 EMBL:AY086886 IPI:IPI00542180
RefSeq:NP_186926.1 UniGene:At.41079 ProteinModelPortal:Q9M8R9
SMR:Q9M8R9 IntAct:Q9M8R9 STRING:Q9M8R9 PaxDb:Q9M8R9 PRIDE:Q9M8R9
EnsemblPlants:AT3G02770.1 GeneID:820949 KEGG:ath:AT3G02770
TAIR:At3g02770 HOGENOM:HOG000252803 InParanoid:Q9M8R9 KO:K02553
OMA:CDAYPDL PhylomeDB:Q9M8R9 ProtClustDB:CLSN2685213
Genevestigator:Q9M8R9 GermOnline:AT3G02770 TIGRFAMs:TIGR01935
Uniprot:Q9M8R9
Length = 166
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 140/166 (84%), Positives = 155/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN ++I SG+LRALQP+FQIYGRRQ+FSGP+VT+KVFEDN LIR FLEE
Sbjct: 1 MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA+KKG+GE+ V + I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166
>TAIR|locus:2156430 [details] [associations]
symbol:AT5G56260 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008428 "ribonuclease
inhibitor activity" evidence=IEA] [GO:0051252 "regulation of RNA
metabolic process" evidence=IEA] InterPro:IPR010203 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008428 eggNOG:COG0684
Gene3D:3.50.30.40 InterPro:IPR005493 Pfam:PF03737 SUPFAM:SSF89562
EMBL:AB023029 GO:GO:0051252 HOGENOM:HOG000252803 KO:K02553
ProtClustDB:CLSN2685213 TIGRFAMs:TIGR01935 EMBL:BT010892
EMBL:BT010934 IPI:IPI00541018 RefSeq:NP_200437.1 UniGene:At.29397
ProteinModelPortal:Q9FH13 SMR:Q9FH13 IntAct:Q9FH13 PaxDb:Q9FH13
PRIDE:Q9FH13 DNASU:835725 EnsemblPlants:AT5G56260.1 GeneID:835725
KEGG:ath:AT5G56260 TAIR:At5g56260 InParanoid:Q9FH13 OMA:NIEAGTH
PhylomeDB:Q9FH13 Genevestigator:Q9FH13 GermOnline:AT5G56260
Uniprot:Q9FH13
Length = 166
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 119/166 (71%), Positives = 141/166 (84%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGPIVTLKVFEDNVL+R LE
Sbjct: 1 MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG G VLV+DGGGS+RCA++GGN AQNNGW+GIVVNGC+RDVDEIN CD+GVRAL S
Sbjct: 61 KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P+K+ KKG GEK+VP+ IGGT I DGEWLYAD+DGILIS+ ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166
>UNIPROTKB|P0A8R0 [details] [associations]
symbol:rraA "ribonuclease E inhibitor protein"
species:83333 "Escherichia coli K-12" [GO:0051252 "regulation of
RNA metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0060702 "negative regulation of endoribonuclease
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IEA;IDA]
[GO:0006401 "RNA catabolic process" evidence=IDA]
InterPro:IPR010203 InterPro:IPR014339 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008428 GO:GO:0006401 EMBL:L19201 GO:GO:0060702
eggNOG:COG0684 Gene3D:3.50.30.40 InterPro:IPR005493 Pfam:PF03737
SUPFAM:SSF89562 EMBL:U56082 GO:GO:0051252 HOGENOM:HOG000252803
KO:K02553 TIGRFAMs:TIGR01935 OMA:ELCDIYH ProtClustDB:PRK09372
HAMAP:MF_00471 TIGRFAMs:TIGR02998 PIR:S40872 RefSeq:NP_418364.1
RefSeq:YP_491522.1 PDB:1Q5X PDB:2YJT PDB:2YJV PDBsum:1Q5X
PDBsum:2YJT PDBsum:2YJV ProteinModelPortal:P0A8R0 SMR:P0A8R0
DIP:DIP-35864N IntAct:P0A8R0 PRIDE:P0A8R0
EnsemblBacteria:EBESCT00000002706 EnsemblBacteria:EBESCT00000002707
EnsemblBacteria:EBESCT00000016794 GeneID:12932791 GeneID:948419
KEGG:ecj:Y75_p3258 KEGG:eco:b3929 PATRIC:32123373 EchoBASE:EB1825
EcoGene:EG11879 BioCyc:EcoCyc:EG11879-MONOMER
BioCyc:ECOL316407:JW3900-MONOMER EvolutionaryTrace:P0A8R0
Genevestigator:P0A8R0 Uniprot:P0A8R0
Length = 161
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 67/161 (41%), Positives = 99/161 (61%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>TIGR_CMR|SO_4197 [details] [associations]
symbol:SO_4197 "S-adenosylmethionine:2-demethylmenaquinone
methyltransferase" species:211586 "Shewanella oneidensis MR-1"
[GO:0008757 "S-adenosylmethionine-dependent methyltransferase
activity" evidence=ISS] [GO:0009234 "menaquinone biosynthetic
process" evidence=ISS] InterPro:IPR010203 InterPro:IPR014339
GO:GO:0005737 GO:GO:0008428 EMBL:AE014299 GenomeReviews:AE014299_GR
eggNOG:COG0684 Gene3D:3.50.30.40 InterPro:IPR005493 Pfam:PF03737
SUPFAM:SSF89562 GO:GO:0051252 HOGENOM:HOG000252803 KO:K02553
TIGRFAMs:TIGR01935 OMA:ELCDIYH ProtClustDB:PRK09372 HAMAP:MF_00471
TIGRFAMs:TIGR02998 RefSeq:NP_719725.1 ProteinModelPortal:Q8E9R9
SMR:Q8E9R9 GeneID:1171801 KEGG:son:SO_4197 PATRIC:23528016
Uniprot:Q8E9R9
Length = 161
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 68/161 (42%), Positives = 98/161 (60%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ ++P+F YG F G I T+K FEDN LI + L+E G G+
Sbjct: 5 TSELCDMYLDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLITDVLQEDGQGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ G A +N W GI+V G +RDVD + DIG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALIDGTIAELAVSNNWEGIIVYGSVRDVDALEELDIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 120 DGNSVGEVDIPVNFGGVTFLPGDHIYADNTGIILSPEPLDI 160
>UNIPROTKB|Q47VZ9 [details] [associations]
symbol:rraA "Regulator of ribonuclease activity A"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010203 InterPro:IPR014339 GO:GO:0005737
GO:GO:0008428 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0684 Gene3D:3.50.30.40 InterPro:IPR005493 Pfam:PF03737
SUPFAM:SSF89562 GO:GO:0051252 HOGENOM:HOG000252803 KO:K02553
TIGRFAMs:TIGR01935 OMA:ELCDIYH ProtClustDB:PRK09372
RefSeq:YP_271023.1 ProteinModelPortal:Q47VZ9 STRING:Q47VZ9
GeneID:3520127 KEGG:cps:CPS_4374 PATRIC:21471593
BioCyc:CPSY167879:GI48-4383-MONOMER HAMAP:MF_00471
TIGRFAMs:TIGR02998 Uniprot:Q47VZ9
Length = 165
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 68/161 (42%), Positives = 96/161 (59%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD LI + PIF YG R F+G +VTLK FE LI E + G G+
Sbjct: 5 TSELCDFYADLI-----DVVDPIFCNYGGRSSFAGKVVTLKCFEHLGLINELVATYGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS R A++ A NNGW GIV G +RDVD ++G DIG++AL + P+ A
Sbjct: 60 VLVIDGGGSTRRALIDLGIAQCAANNGWEGIVCYGSVRDVDALDGVDIGIQALGAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+++ IGE + I G + +++YAD GI++S L +
Sbjct: 120 SEQNIGETDMAINFAGVTLLPDDYIYADNTGIILSPEALEI 160
>TIGR_CMR|CPS_4374 [details] [associations]
symbol:CPS_4374 "protein of unknown function"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010203 InterPro:IPR014339 GO:GO:0005737
GO:GO:0008428 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0684 Gene3D:3.50.30.40 InterPro:IPR005493 Pfam:PF03737
SUPFAM:SSF89562 GO:GO:0051252 HOGENOM:HOG000252803 KO:K02553
TIGRFAMs:TIGR01935 OMA:ELCDIYH ProtClustDB:PRK09372
RefSeq:YP_271023.1 ProteinModelPortal:Q47VZ9 STRING:Q47VZ9
GeneID:3520127 KEGG:cps:CPS_4374 PATRIC:21471593
BioCyc:CPSY167879:GI48-4383-MONOMER HAMAP:MF_00471
TIGRFAMs:TIGR02998 Uniprot:Q47VZ9
Length = 165
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 68/161 (42%), Positives = 96/161 (59%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD LI + PIF YG R F+G +VTLK FE LI E + G G+
Sbjct: 5 TSELCDFYADLI-----DVVDPIFCNYGGRSSFAGKVVTLKCFEHLGLINELVATYGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS R A++ A NNGW GIV G +RDVD ++G DIG++AL + P+ A
Sbjct: 60 VLVIDGGGSTRRALIDLGIAQCAANNGWEGIVCYGSVRDVDALDGVDIGIQALGAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+++ IGE + I G + +++YAD GI++S L +
Sbjct: 120 SEQNIGETDMAINFAGVTLLPDDYIYADNTGIILSPEALEI 160
>UNIPROTKB|P0A666 [details] [associations]
symbol:rraA "Putative regulator of ribonuclease activity"
species:1773 "Mycobacterium tuberculosis" [GO:0070207 "protein
homotrimerization" evidence=IPI] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=TAS] InterPro:IPR010203 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842584
GO:GO:0008428 GO:GO:0070207 eggNOG:COG0684 Gene3D:3.50.30.40
InterPro:IPR005493 Pfam:PF03737 SUPFAM:SSF89562 GO:GO:0051252
HOGENOM:HOG000252803 KO:K02553 TIGRFAMs:TIGR01935 OMA:NIEAGTH
PIR:B70655 RefSeq:NP_218370.1 RefSeq:NP_338521.1
RefSeq:YP_006517352.1 PDB:1NXJ PDBsum:1NXJ
ProteinModelPortal:P0A666 SMR:P0A666 PRIDE:P0A666
EnsemblBacteria:EBMYCT00000000475 EnsemblBacteria:EBMYCT00000071221
GeneID:13317479 GeneID:886181 GeneID:922552 KEGG:mtc:MT3968
KEGG:mtu:Rv3853 KEGG:mtv:RVBD_3853 PATRIC:18130481
TubercuList:Rv3853 ProtClustDB:PRK09372 EvolutionaryTrace:P0A666
Uniprot:P0A666
Length = 157
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 56/142 (39%), Positives = 90/142 (63%)
Query: 18 VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRC 77
+ ++R+ F+ +G R F+GPI T++ F+DN L++ L + G VLV+DG GSL
Sbjct: 15 IGPDVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHT 74
Query: 78 AILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPI 137
A++G A++ GW G++V+G +RD + G DIG++AL ++P K+ K G GE+ V I
Sbjct: 75 ALVGDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEI 134
Query: 138 TIGGTRISDGEWLYADTDGILI 159
T+GG G+ Y+D DGI++
Sbjct: 135 TLGGVTFVPGDIAYSDDDGIIV 156
>TIGR_CMR|SO_2567 [details] [associations]
symbol:SO_2567 "S-adenosylmethionine:2-demethylmenaquinone
methyltransferase" species:211586 "Shewanella oneidensis MR-1"
[GO:0008757 "S-adenosylmethionine-dependent methyltransferase
activity" evidence=ISS] [GO:0009234 "menaquinone biosynthetic
process" evidence=ISS] InterPro:IPR010203 GO:GO:0008428
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0684
Gene3D:3.50.30.40 InterPro:IPR005493 Pfam:PF03737 SUPFAM:SSF89562
GO:GO:0051252 HOGENOM:HOG000252803 KO:K02553 TIGRFAMs:TIGR01935
RefSeq:NP_718153.1 ProteinModelPortal:Q8EE23 GeneID:1170272
KEGG:son:SO_2567 PATRIC:23524763 ProtClustDB:PRK12487
Uniprot:Q8EE23
Length = 164
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 59/142 (41%), Positives = 91/142 (64%)
Query: 25 LQPI-FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGN 83
L P+ F+ +G +++F G +VT+K FEDN ++E L + G+G+VL+VDGGGS R A+LG
Sbjct: 18 LLPLAFRAFGGKRLFWGEVVTVKCFEDNSKVKEVLAQPGHGKVLIVDGGGSSRRALLGDL 77
Query: 84 PVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTR 143
A +NGW G+++NG +RD ++ ++GV AL + PMK K G+ +VPI +G
Sbjct: 78 IAQSAMDNGWQGVIINGYVRDAARLSSFNLGVYALGAMPMKTEKLDQGQINVPIELGCVT 137
Query: 144 ISDGEWLYADTDGILISRAELS 165
+ G +Y D +GI IS L+
Sbjct: 138 VKPGMMVYVDENGIAISEESLN 159
>UNIPROTKB|Q489G8 [details] [associations]
symbol:CPS_0538 "Putative uncharacterized protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010203 GO:GO:0008428 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0684 Gene3D:3.50.30.40
InterPro:IPR005493 Pfam:PF03737 SUPFAM:SSF89562 GO:GO:0051252
HOGENOM:HOG000252803 KO:K02553 TIGRFAMs:TIGR01935
ProtClustDB:PRK12487 RefSeq:YP_267296.1 ProteinModelPortal:Q489G8
STRING:Q489G8 GeneID:3523336 KEGG:cps:CPS_0538 PATRIC:21464419
OMA:LQICRQS BioCyc:CPSY167879:GI48-633-MONOMER Uniprot:Q489G8
Length = 163
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 55/146 (37%), Positives = 85/146 (58%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L F YG+ +F G IVT+ FEDN ++E L G+G+VLVVDG GS+ A+L
Sbjct: 15 QLSLANQAFTDYGKNTIFYGEIVTVSCFEDNSKVKEILATDGSGKVLVVDGKGSMNRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A N W +V+NGCIRD I +I V+A+ +P+K K G+G+ ++ +
Sbjct: 75 GDMIAENAVKNNWQAVVINGCIRDAGTIRTLEIAVKAIGCNPIKTEKLGVGDTNIVVNFA 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G ++Y D +G+ +S+++LSV
Sbjct: 135 NVEFIPGWYVYGDENGLAVSKSKLSV 160
>TIGR_CMR|CPS_0538 [details] [associations]
symbol:CPS_0538 "protein of unknown function"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010203 GO:GO:0008428 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0684 Gene3D:3.50.30.40
InterPro:IPR005493 Pfam:PF03737 SUPFAM:SSF89562 GO:GO:0051252
HOGENOM:HOG000252803 KO:K02553 TIGRFAMs:TIGR01935
ProtClustDB:PRK12487 RefSeq:YP_267296.1 ProteinModelPortal:Q489G8
STRING:Q489G8 GeneID:3523336 KEGG:cps:CPS_0538 PATRIC:21464419
OMA:LQICRQS BioCyc:CPSY167879:GI48-633-MONOMER Uniprot:Q489G8
Length = 163
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 55/146 (37%), Positives = 85/146 (58%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L F YG+ +F G IVT+ FEDN ++E L G+G+VLVVDG GS+ A+L
Sbjct: 15 QLSLANQAFTDYGKNTIFYGEIVTVSCFEDNSKVKEILATDGSGKVLVVDGKGSMNRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A N W +V+NGCIRD I +I V+A+ +P+K K G+G+ ++ +
Sbjct: 75 GDMIAENAVKNNWQAVVINGCIRDAGTIRTLEIAVKAIGCNPIKTEKLGVGDTNIVVNFA 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G ++Y D +G+ +S+++LSV
Sbjct: 135 NVEFIPGWYVYGDENGLAVSKSKLSV 160
>UNIPROTKB|Q48I30 [details] [associations]
symbol:PSPPH_2762 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0684
HOGENOM:HOG000107599 Gene3D:3.50.30.40 InterPro:IPR005493
Pfam:PF03737 SUPFAM:SSF89562 RefSeq:YP_274951.1
ProteinModelPortal:Q48I30 STRING:Q48I30 GeneID:3557182
KEGG:psp:PSPPH_2762 PATRIC:19974841 OMA:CACWGEL
ProtClustDB:CLSK759470 Uniprot:Q48I30
Length = 212
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 19 SGELRALQPIFQIYGRRQVFSGPIVTLKV-FEDNVLIREFLEEKGNGRVLVVDGGGSLRC 77
SG L ++P+F G R V G +VT+KV D ++R+ L G VLV++ G C
Sbjct: 34 SGYLPGIRPLFD--GVRLV--GNVVTVKVQLPDGSILRDALLNSLPGDVLVIECVGDDHC 89
Query: 78 AILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGI-GEKHVP 136
A G + A G AG+V++G + DV + + V + + G GE +
Sbjct: 90 ACWGELRTLAALIKGLAGVVISGAVTDVAALREHRLPVFSRGISAVTTRSLGERGELNGQ 149
Query: 137 ITIGGTRISDGEWLYADTDGILISRAE 163
I IGG ++ G+ D DG+ I A+
Sbjct: 150 INIGGVVVNPGDIAIGDDDGVFILSAQ 176
>ASPGD|ASPL0000032745 [details] [associations]
symbol:AN10700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001305 Gene3D:3.50.30.40 InterPro:IPR005493
Pfam:PF03737 SUPFAM:SSF89562 OMA:IRDLDEH ProteinModelPortal:C8VFV1
EnsemblFungi:CADANIAT00003423 Uniprot:C8VFV1
Length = 286
Score = 122 (48.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 31/104 (29%), Positives = 57/104 (54%)
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
N VL+ G CA++GG V+ ++ G G+VV+G IRD++EI G + V A +
Sbjct: 147 NTIVLISQPPGQ-HCAVVGGIMAVRMKSLGIKGVVVDGRIRDLNEIQGASLPVWAKGTST 205
Query: 123 MKANKKGI-GEKHVPITIGGTRISDGEWLYADT-DGILISRAEL 164
+ + G ++V I +GG + G+ ++ D +G+++ +L
Sbjct: 206 VGTGAEAKPGLRNVRIDVGGVTVDPGDIVFCDPLEGVVVIPKDL 249
>UNIPROTKB|Q48JQ1 [details] [associations]
symbol:PSPPH_2160 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0684
HOGENOM:HOG000107599 Gene3D:3.50.30.40 InterPro:IPR005493
Pfam:PF03737 SUPFAM:SSF89562 RefSeq:YP_274377.1
ProteinModelPortal:Q48JQ1 STRING:Q48JQ1 GeneID:3560025
KEGG:psp:PSPPH_2160 PATRIC:19973552 OMA:FMRTGKD
ProtClustDB:CLSK2520711 Uniprot:Q48JQ1
Length = 237
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/164 (23%), Positives = 69/164 (42%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIR---EFLEEKG 62
TA + DA L ++G L + + Q+ G R V V + + + ++ +
Sbjct: 23 TASLSDALDSLGINGGLPGI--VSQVPGTRCVGVAFTVQYEAVDAPTTFKGAANYINQVP 80
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G V+V G C + G A NG G V++G RD+D + C+ + +
Sbjct: 81 CGAVIVCSNAGRHDCTVWGDIMTHFALANGIKGTVIDGVARDIDTVIRCNYPLFSRGRFM 140
Query: 123 MKA-NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
A N+ + VP+ I G + G+ L D G ++ +L+
Sbjct: 141 QSAKNRAQLKAVQVPVVIDGVTVRPGDLLVCDGSGCVVIPQQLA 184
>UNIPROTKB|Q880F6 [details] [associations]
symbol:PSPTO_3204 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG0684
HOGENOM:HOG000107599 Gene3D:3.50.30.40 InterPro:IPR005493
Pfam:PF03737 SUPFAM:SSF89562 OMA:FMRTGKD ProtClustDB:CLSK2520711
RefSeq:NP_792992.1 PDB:3K4I PDBsum:3K4I ProteinModelPortal:Q880F6
DNASU:1184861 GeneID:1184861 KEGG:pst:PSPTO_3204 PATRIC:19997787
BioCyc:PSYR223283:GJIX-3256-MONOMER EvolutionaryTrace:Q880F6
Uniprot:Q880F6
Length = 237
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/164 (24%), Positives = 70/164 (42%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIR---EFLEEKG 62
TA + DA L + G L + Q+ G R V V + + + R ++++
Sbjct: 23 TASLSDALDSLGIDGGLPGIAS--QVPGTRCVGIAFTVQYQPVDASEGFRGAANYIDQVP 80
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
+G V+V G C + G A NG G V++G RD+D + C+ + +
Sbjct: 81 SGSVIVSSNSGRHDCTVWGDIMTHFALANGIKGTVIDGVARDIDTVINCNYPLFSRGRFM 140
Query: 123 MKA-NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
A N+ + VP+ I G I G+ + D G ++ +L+
Sbjct: 141 QSAKNRTQLKAVQVPLVIDGITIQPGDLMVCDGSGCVVVPQQLA 184
>UNIPROTKB|Q9AQI0 [details] [associations]
symbol:proA "4-hydroxy-4-methyl-2-oxoglutarate aldolase"
species:47882 "Pseudomonas straminea" [GO:0008700
"4-hydroxy-2-oxoglutarate aldolase activity" evidence=IDA]
[GO:0008948 "oxaloacetate decarboxylase activity" evidence=IDA]
[GO:0019619 "protocatechuate catabolic process" evidence=IDA]
[GO:0047443 "4-hydroxy-4-methyl-2-oxoglutarate aldolase activity"
evidence=IDA] GO:GO:0046872 GO:GO:0008700 GO:GO:0047443
Gene3D:3.50.30.40 InterPro:IPR014165 InterPro:IPR005493
Pfam:PF03737 SUPFAM:SSF89562 TIGRFAMs:TIGR02798 EMBL:AB050935
ProteinModelPortal:Q9AQI0 BioCyc:MetaCyc:MONOMER-3244 GO:GO:0008948
GO:GO:0019619 Uniprot:Q9AQI0
Length = 227
Score = 109 (43.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 20 GELRALQPIFQ-IYGRRQVFSGPIVTLKVFE-DNVLIREFLEEKGNGRVLVVDGGGSLRC 77
G + L+P + IY +QV SG VT+ + DN ++ E+ G ++V
Sbjct: 35 GRVGLLKPYMRPIYAGKQV-SGTAVTVLLQPGDNWMMHVAAEQIQPGDIVVAAVTAECTD 93
Query: 78 AILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPI 137
G Q G ++++ +RDV + D V + A K +G ++PI
Sbjct: 94 GYFGDLLATSFQARGARALIIDAGVRDVKTLQEMDFPVWSKAISSKGTIKATLGSVNIPI 153
Query: 138 TIGGTRISDGEWLYADTDGILISRAELSV 166
G ++ G+ + AD DG++ A +V
Sbjct: 154 VCAGMLVTPGDVIVADDDGVVCVPAARAV 182
>UNIPROTKB|Q88JX9 [details] [associations]
symbol:galC "4-carboxy-4-hydroxy-2-oxoadipic acid aldolase"
species:160488 "Pseudomonas putida KT2440" [GO:0008152 "metabolic
process" evidence=IDA] [GO:0016833 "oxo-acid-lyase activity"
evidence=IDA] [GO:0019396 "gallate catabolic process" evidence=IDA]
GO:GO:0019439 GO:GO:0046872 EMBL:AE015451 GenomeReviews:AE015451_GR
GO:GO:0016833 GO:GO:0019396 RefSeq:NP_744662.1
ProteinModelPortal:Q88JX9 STRING:Q88JX9 GeneID:1045759
KEGG:ppu:PP_2514 PATRIC:19943450 eggNOG:COG0684
HOGENOM:HOG000107599 KO:K10218 OMA:QPGDNWM ProtClustDB:PRK09262
BioCyc:MetaCyc:MONOMER-3481 BioCyc:PPUT160488:GIXO-2515-MONOMER
GO:GO:0047443 Gene3D:3.50.30.40 InterPro:IPR014165
InterPro:IPR005493 Pfam:PF03737 SUPFAM:SSF89562 TIGRFAMs:TIGR02798
Uniprot:Q88JX9
Length = 238
Score = 104 (41.7 bits), Expect = 0.00051, P = 0.00051
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 39 SGPIVTLKVFE-DNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIV 97
+G VT+ V DN + +E+ G VLVV G Q G G+V
Sbjct: 58 AGSAVTVLVAPGDNWMFHVAVEQCRPGDVLVVAPSSPCSDGYFGDLLATSLQARGVLGLV 117
Query: 98 VNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGI 157
++ +RD + V + A + K+ +G ++P+ G ++ G+ + AD DG+
Sbjct: 118 IDAGVRDSQTLRDMGFAVWSRAINAQGTVKEVLGSVNLPLLCAGQLVNAGDIVVADDDGV 177
Query: 158 LISR 161
++ R
Sbjct: 178 VVVR 181
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.141 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 166 166 0.00097 107 3 11 22 0.39 32
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 581 (62 KB)
Total size of DFA: 143 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.71u 0.14s 13.85t Elapsed: 00:00:01
Total cpu time: 13.71u 0.14s 13.85t Elapsed: 00:00:01
Start: Fri May 10 09:19:55 2013 End: Fri May 10 09:19:56 2013