BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031062
MEETMKQFQQNLIEIENEAEHLLFARHQLVESDIVRNGNREALTALRKRARTTKTSVISP
FESIMKDTGGPGTRPLVKEVCTTCGNHDSNEHTWMMFPGTDVFAKIPFHAAHTILETDQT
RLDFEAKKLQSYVKEKSLFISEKGALADKISPGVLRSLVTLTDKSK

High Scoring Gene Products

Symbol, full name Information P value
AT3G15351 protein from Arabidopsis thaliana 8.8e-47
zgc:112519 gene_product from Danio rerio 9.7e-06
PDRG1
p53 and DNA damage-regulated protein 1
protein from Homo sapiens 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031062
        (166 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006349 - symbol:AT3G15351 "AT3G15351" speci...   490  8.8e-47   1
ZFIN|ZDB-GENE-050417-276 - symbol:zgc:112519 "zgc:112519"...    80  9.7e-06   2
UNIPROTKB|Q9NUG6 - symbol:PDRG1 "p53 and DNA damage-regul...    68  0.00093   2


>TAIR|locus:505006349 [details] [associations]
            symbol:AT3G15351 "AT3G15351" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AP000413 EMBL:AY087430
            EMBL:BT020315 EMBL:BT020547 IPI:IPI00539014 RefSeq:NP_566507.1
            UniGene:At.39062 PRIDE:Q9LJR1 EnsemblPlants:AT3G15351.1
            GeneID:820769 KEGG:ath:AT3G15351 TAIR:At3g15351 InParanoid:Q9LJR1
            OMA:NDKIRNG PhylomeDB:Q9LJR1 ProtClustDB:CLSN2688401
            Genevestigator:Q9LJR1 Uniprot:Q9LJR1
        Length = 165

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 96/164 (58%), Positives = 120/164 (73%)

Query:     1 MEETMKQFQQNLIEIENEAEHLLFARHQLVESDIVRNGNREXXXXXXXXXXXXXXSVISP 60
             M+   K+F   L +IE EA+  L AR+Q+VE+D  RN NRE              SV+SP
Sbjct:     1 MDLDPKKFAALLDKIEAEADEFLLARNQMVENDKERNANREALTALRKRARTTKTSVMSP 60

Query:    61 FESIMKDTGGPGTRPLVKEVCTTCGNHDSNEHTWMMFPGTDVFAKIPFHAAHTILETDQT 120
             F+S+MKD  G  T+PLV+EVC+TCG+HDS+E TWMM PG D+FA IPFHA HT+LE D+ 
Sbjct:    61 FDSMMKDIHGSSTKPLVQEVCSTCGSHDSSEPTWMMLPGADLFAAIPFHAVHTMLEKDEE 120

Query:   121 RLDFEAKKLQSYVKEKSLFISEKGALADKISPGVLRSLVTLTDK 164
             +++FE+KKLQS VKEK+LFISE GALAD ISPGV+RSLV L DK
Sbjct:   121 KMEFESKKLQSLVKEKALFISELGALADGISPGVIRSLVALEDK 164


>ZFIN|ZDB-GENE-050417-276 [details] [associations]
            symbol:zgc:112519 "zgc:112519" species:7955 "Danio
            rerio" [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0016272 "prefoldin
            complex" evidence=IEA] InterPro:IPR002777 Pfam:PF01920
            ZFIN:ZDB-GENE-050417-276 GO:GO:0006457 GO:GO:0016272
            InterPro:IPR009053 SUPFAM:SSF46579 eggNOG:NOG70550
            GeneTree:ENSGT00390000013253 HOGENOM:HOG000007729
            HOVERGEN:HBG053553 EMBL:CR855375 EMBL:BC093358 IPI:IPI00570220
            RefSeq:NP_001017757.1 UniGene:Dr.42986 Ensembl:ENSDART00000098124
            Ensembl:ENSDART00000147426 GeneID:550453 KEGG:dre:550453
            InParanoid:Q566S5 NextBio:20879698 Uniprot:Q566S5
        Length = 131

 Score = 80 (33.2 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
 Identities = 16/41 (39%), Positives = 28/41 (68%)

Query:     1 MEETMKQFQQNLIEIENEAEHLLFARHQLVESDIVRNGNRE 41
             M+E+ ++  ++L E+E  AE +L  + Q+V+ D+ RN NRE
Sbjct:     1 MDESAQRVLEHLTEVEVAAEDILTDKQQIVDLDVRRNRNRE 41

 Score = 61 (26.5 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
 Identities = 16/59 (27%), Positives = 32/59 (54%)

Query:    78 KEVCTTCGNHDSNEHTWMMFPGTDVFAKIPFHAAHTILETDQTRLDFEAKKLQSYVKEK 136
             +E  +   N+  N++  + F G ++F K P  +  +++  DQ +LD E   L++ +K K
Sbjct:    40 REALSALRNNSPNDNVKVCF-G-NMFIKFPQESTRSMILKDQEQLDKEITDLRTRLKAK 96


>UNIPROTKB|Q9NUG6 [details] [associations]
            symbol:PDRG1 "p53 and DNA damage-regulated protein 1"
            species:9606 "Homo sapiens" [GO:0006457 "protein folding"
            evidence=IEA] [GO:0016272 "prefoldin complex" evidence=IEA]
            [GO:0051082 "unfolded protein binding" evidence=IEA]
            InterPro:IPR002777 Pfam:PF01920 EMBL:CH471077 GO:GO:0006457
            GO:GO:0016272 EMBL:AL031658 CTD:81572 eggNOG:NOG70550
            HOGENOM:HOG000007729 HOVERGEN:HBG053553 OMA:GNMFIRM
            OrthoDB:EOG4CZBHD EMBL:AY286301 EMBL:AK312021 EMBL:BC001856
            EMBL:BC009334 IPI:IPI00027887 RefSeq:NP_110442.1 UniGene:Hs.435755
            ProteinModelPortal:Q9NUG6 DIP:DIP-27568N IntAct:Q9NUG6
            MINT:MINT-1140540 STRING:Q9NUG6 PhosphoSite:Q9NUG6 DMDM:24211602
            PaxDb:Q9NUG6 PRIDE:Q9NUG6 DNASU:81572 Ensembl:ENST00000202017
            GeneID:81572 KEGG:hsa:81572 UCSC:uc002wxd.3 GeneCards:GC20M030532
            HGNC:HGNC:16119 HPA:HPA047084 MIM:610789 neXtProt:NX_Q9NUG6
            PharmGKB:PA25667 InParanoid:Q9NUG6 PhylomeDB:Q9NUG6 ChiTaRS:PDRG1
            GenomeRNAi:81572 NextBio:71876 Bgee:Q9NUG6 CleanEx:HS_PDRG1
            Genevestigator:Q9NUG6 GermOnline:ENSG00000088356 Uniprot:Q9NUG6
        Length = 133

 Score = 68 (29.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query:    12 LIEIENEAEHLLFARHQLVESDIVRNGNRE 41
             L+E+E  AE +L  + Q+V+ D  RN NRE
Sbjct:    13 LVEVEELAEEVLADKRQIVDLDTKRNQNRE 42

 Score = 61 (26.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query:   101 DVFAKIPFHAAHTILETDQTRLDFEAKKLQSYVKEK 136
             ++F K+P      ++E DQ  LD E +KL+  +K K
Sbjct:    63 NMFIKMPHPETKEMIEKDQDHLDKEIEKLRKQLKVK 98


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      166       152   0.00073  105 3  11 22  0.37    32
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  139 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.20u 0.18s 13.38t   Elapsed:  00:00:01
  Total cpu time:  13.20u 0.18s 13.38t   Elapsed:  00:00:01
  Start:  Fri May 10 09:26:47 2013   End:  Fri May 10 09:26:48 2013

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