Query 031064
Match_columns 166
No_of_seqs 118 out of 164
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 13:40:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031064.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031064hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pv7a1 a.100.1.12 (A:244-371) 51.3 24 0.0018 23.6 6.6 43 22-64 51-93 (128)
2 d1yoza1 a.253.1.1 (A:11-124) H 49.5 7.1 0.00052 27.5 3.5 40 32-71 22-79 (114)
3 d1hf8a1 a.7.8.2 (A:150-281) Cl 45.3 8 0.00058 27.5 3.3 54 9-65 42-95 (132)
4 d1hx8a1 a.7.8.2 (A:167-299) AP 40.0 12 0.00089 26.5 3.6 54 9-65 39-92 (133)
5 d2jf2a1 b.81.1.1 (A:1-262) UDP 36.6 5.1 0.00037 30.3 1.0 41 19-60 215-255 (262)
6 d3e5ua2 b.82.3.2 (A:9-147) Chl 32.3 37 0.0027 21.9 4.9 38 31-68 101-139 (139)
7 d1p5qa1 a.118.8.1 (A:258-427) 31.7 45 0.0033 22.2 5.4 18 56-73 152-169 (170)
8 d1nkpa_ a.38.1.1 (A:) Myc prot 29.4 62 0.0045 20.3 8.4 61 5-65 7-85 (88)
9 d1or4a_ a.1.1.2 (A:) Heme-base 25.8 43 0.0031 23.0 4.5 44 9-54 47-90 (169)
10 d2gfna1 a.4.1.9 (A:4-80) Proba 24.5 29 0.0021 20.9 3.0 27 14-40 49-75 (77)
11 d1ft9a2 b.82.3.1 (A:2-133) CO- 21.2 62 0.0045 20.7 4.3 38 31-68 94-132 (132)
No 1
>d2pv7a1 a.100.1.12 (A:244-371) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}
Probab=51.30 E-value=24 Score=23.62 Aligned_cols=43 Identities=5% Similarity=0.047 Sum_probs=29.4
Q ss_pred HHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhh
Q 031064 22 LYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQ 64 (166)
Q Consensus 22 L~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~q 64 (166)
+.+-|....++...+++.+|+.+.+-++++.+.|.-|+++.++
T Consensus 51 ~~tRIa~~~p~lw~dI~~~N~~~~~~l~~~~~~l~~l~~~i~~ 93 (128)
T d2pv7a1 51 MIGRLFAQDAELYADIIMDKSENLAVIETLKQTYDEALTFFEN 93 (128)
T ss_dssp HHHHHHTSCHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5678888889999999999998877777766666666665543
No 2
>d1yoza1 a.253.1.1 (A:11-124) Hypothetical protein AF0941 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=49.53 E-value=7.1 Score=27.45 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=31.5
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHH------------------HHhhhhhhhhh
Q 031064 32 ARIEELLQEDQNVKRRRDRYQKQSELLSK------------------LTRQLSIHDNR 71 (166)
Q Consensus 32 ~~l~eLL~Ed~~v~~RRe~c~kmLelLkk------------------A~~qlsihdnr 71 (166)
+..+.||+.--....-|..|...|.+|+. ...|||||=.|
T Consensus 22 eeadklldqknifemfrsdceeilnlyksgkaekeevqrnfyllktyvvsqlsihfer 79 (114)
T d1yoza1 22 EEADKLLDQKNIFEMFRSDCEEILNLYKSGKAEKEEVQRNFYLLKTYVVSQLSIHFER 79 (114)
T ss_dssp GGHHHHTCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHhHHhHHHHHHhhHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677887777777788888888888864 35799999988
No 3
>d1hf8a1 a.7.8.2 (A:150-281) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.29 E-value=8 Score=27.52 Aligned_cols=54 Identities=11% Similarity=0.167 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhh
Q 031064 9 CQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQL 65 (166)
Q Consensus 9 ~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~ql 65 (166)
.+|..|=.-|.++++ +||..=.+-+-.||. -.....|..|.+-+++|++++.|.
T Consensus 42 ~vi~~A~~llvkds~-~lY~~inegiinLLd--~fFem~k~da~~al~iykr~~~q~ 95 (132)
T d1hf8a1 42 GVINAAFMLLFKDAI-RLFAAYNEGIINLLE--KYFDMKKNQCKEGLDIYKKFLTRM 95 (132)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHH
Confidence 345555555555444 244332355566662 233456889999999999999985
No 4
>d1hx8a1 a.7.8.2 (A:167-299) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=40.03 E-value=12 Score=26.53 Aligned_cols=54 Identities=13% Similarity=0.122 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhh
Q 031064 9 CQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQL 65 (166)
Q Consensus 9 ~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~ql 65 (166)
.+|..|=.-|.++++ +||..=.+-+-.||. -.....+..|.+-+++|++++.|.
T Consensus 39 ~vi~~A~~llvkds~-~lY~~inegiinLLd--~fFem~k~da~~al~iyk~~~~q~ 92 (133)
T d1hx8a1 39 GVINMSFMLLFRDLI-RLFACYNDGIINLLE--KYFDMNKKHARDALDLYKKFLVRM 92 (133)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HHHccCHHHHHHHHHHHHHHHHHH
Confidence 344444444444443 244322345555652 234456889999999999999985
No 5
>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]}
Probab=36.59 E-value=5.1 Score=30.26 Aligned_cols=41 Identities=7% Similarity=0.192 Sum_probs=29.1
Q ss_pred HHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 031064 19 LNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSK 60 (166)
Q Consensus 19 QneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~kmLelLkk 60 (166)
++++|..||+. ...|++++++-....+.-++.+++++.+++
T Consensus 215 lk~~~k~L~~~-~~~l~~~~~~l~~~~~~~~~v~~~i~Fi~~ 255 (262)
T d2jf2a1 215 IRNAYKLIYRS-GKTLDEVKPEIAELAETYPEVKAFTDFFAR 255 (262)
T ss_dssp HHHHHHHHHTS-CCCHHHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHhhccCCHHHHHHHHHHHh
Confidence 55678888864 566777777666666555677888888765
No 6
>d3e5ua2 b.82.3.2 (A:9-147) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=32.28 E-value=37 Score=21.93 Aligned_cols=38 Identities=5% Similarity=0.190 Sum_probs=23.8
Q ss_pred hHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHhhhhhh
Q 031064 31 TARIEELLQEDQNVKRR-RDRYQKQSELLSKLTRQLSIH 68 (166)
Q Consensus 31 ~~~l~eLL~Ed~~v~~R-Re~c~kmLelLkkA~~qlsih 68 (166)
.+.|.+|++++|.+... =+.+.+++..+.+-.++|+.|
T Consensus 101 ~~~f~~l~~~~p~l~~~il~~~~~r~~~~~~~i~~l~~~ 139 (139)
T d3e5ua2 101 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTY 139 (139)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 47899999999998632 233444455555555555543
No 7
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.70 E-value=45 Score=22.19 Aligned_cols=18 Identities=22% Similarity=0.438 Sum_probs=14.9
Q ss_pred HHHHHHHhhhhhhhhhhh
Q 031064 56 ELLSKLTRQLSIHDNRAA 73 (166)
Q Consensus 56 elLkkA~~qlsihdnraa 73 (166)
++|++..++|+-.|++|.
T Consensus 152 ~~~~~~f~~~~~~~~~~~ 169 (170)
T d1p5qa1 152 KLYANMFERLAEEENKAK 169 (170)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcchhhhc
Confidence 467788999999999975
No 8
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.38 E-value=62 Score=20.28 Aligned_cols=61 Identities=23% Similarity=0.253 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc------------------hHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhh
Q 031064 5 AVVLCQVEKAKEDMLNQLYSSVGAQS------------------TARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQL 65 (166)
Q Consensus 5 AIMl~LVnkAKe~LQneL~s~LYk~~------------------~~~l~eLL~Ed~~v~~RRe~c~kmLelLkkA~~ql 65 (166)
=..|..+++-+.+-+|+.|..|..-= -+-|..|-.+...+....+...+..+.|++...||
T Consensus 7 R~~Hn~~Er~RR~~in~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 7 RRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35788999999988898888886321 12233444444445555555555555666655555
No 9
>d1or4a_ a.1.1.2 (A:) Heme-based aerotactic transducer HemAT, sensor domain {Bacillus subtilis [TaxId: 1423]}
Probab=25.81 E-value=43 Score=23.03 Aligned_cols=44 Identities=7% Similarity=0.360 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHhcCHHHHHHHHHHHHH
Q 031064 9 CQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQ 54 (166)
Q Consensus 9 ~LVnkAKe~LQneL~s~LYk~~~~~l~eLL~Ed~~v~~RRe~c~km 54 (166)
-+|.+..+.|...||..|.. .+.+..++.....+...+....+-
T Consensus 47 p~i~~~~~~i~d~FY~~l~~--~Pe~~~~f~~~~~~erlk~~~~~~ 90 (169)
T d1or4a_ 47 PLIQENIVNIVDAFYKNLDH--ESSLMDIINDHSSVDRLKQTLKRH 90 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--SHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc--CHHHHHHHcCccchHHHHHHHHHH
Confidence 46778888999999999986 477788886554444444444433
No 10
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=24.50 E-value=29 Score=20.88 Aligned_cols=27 Identities=19% Similarity=0.345 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHhccchHHHHHHHhc
Q 031064 14 AKEDMLNQLYSSVGAQSTARIEELLQE 40 (166)
Q Consensus 14 AKe~LQneL~s~LYk~~~~~l~eLL~E 40 (166)
.|++|+.+++..+...-.+.+++++.+
T Consensus 49 ~K~~L~~~~~~~~~~~~~~~~~~~~~~ 75 (77)
T d2gfna1 49 SRHELLLAALRRAGDIQGDRYRTILDE 75 (77)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 566777776666665444445555543
No 11
>d1ft9a2 b.82.3.1 (A:2-133) CO-sensing protein CooA, N-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=21.15 E-value=62 Score=20.70 Aligned_cols=38 Identities=13% Similarity=0.048 Sum_probs=20.8
Q ss_pred hHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHhhhhhh
Q 031064 31 TARIEELLQEDQNVKR-RRDRYQKQSELLSKLTRQLSIH 68 (166)
Q Consensus 31 ~~~l~eLL~Ed~~v~~-RRe~c~kmLelLkkA~~qlsih 68 (166)
.+.+.+||+++|.+.. =-+.+.++|.-...-.++|..|
T Consensus 94 ~~~~~~ll~~~p~~~~~l~~~l~~rl~~~~~~i~~l~F~ 132 (132)
T d1ft9a2 94 IRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFH 132 (132)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4688999999987752 2223333333333334444443
Done!