BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031066
(166 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224144943|ref|XP_002325470.1| predicted protein [Populus trichocarpa]
gi|118486747|gb|ABK95209.1| unknown [Populus trichocarpa]
gi|222862345|gb|EEE99851.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/166 (97%), Positives = 164/166 (98%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEI GCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEIMGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR EL+V
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRTELAV 166
>gi|255547584|ref|XP_002514849.1| Regulator of ribonuclease activity A, putative [Ricinus communis]
gi|223545900|gb|EEF47403.1| Regulator of ribonuclease activity A, putative [Ricinus communis]
Length = 166
Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/166 (97%), Positives = 165/166 (99%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGILVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKGIGEKHVPITIGGTRISDGE+LYADTDGILISR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEFLYADTDGILISRNELSV 166
>gi|388502142|gb|AFK39137.1| unknown [Lotus japonicus]
Length = 166
Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/166 (94%), Positives = 163/166 (98%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLI+SGE+RAL P+FQIYGRRQVFSGP+VTLKVFEDNVL+REFLEE
Sbjct: 1 MALVTTAEVCDANPQLILSGEVRALHPVFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKG+GEKHVPITI GTRISDGEWLYADTDGILISR ELSV
Sbjct: 121 HPMKANKKGMGEKHVPITIAGTRISDGEWLYADTDGILISRTELSV 166
>gi|330318635|gb|AEC10979.1| dimethylmenaquinone methyltransferase [Camellia sinensis]
Length = 166
Score = 324 bits (830), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 158/166 (95%), Positives = 162/166 (97%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRALQP+FQIYGRRQVFSGPIVTLKVFEDNVL+REFLEE
Sbjct: 1 MALVTTAEVCDANPQLIVSGELRALQPVFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGG SLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL S
Sbjct: 61 KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKGIGEKHVP+TIGGTRI DGEWLYADTDGILIS+ ELSV
Sbjct: 121 HPMKANKKGIGEKHVPVTIGGTRICDGEWLYADTDGILISKMELSV 166
>gi|225430941|ref|XP_002277981.1| PREDICTED: regulator of ribonuclease-like protein 2 [Vitis
vinifera]
gi|147863614|emb|CAN79757.1| hypothetical protein VITISV_009897 [Vitis vinifera]
Length = 166
Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/166 (95%), Positives = 161/166 (96%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRALQP+FQIYGRR VFSGPIVTLKVFEDNVLIREFLEE
Sbjct: 1 MALVTTAEVCDANPQLIVSGELRALQPVFQIYGRRPVFSGPIVTLKVFEDNVLIREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL S
Sbjct: 61 KGNGRVLVVDGGGSMRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKGIGEKHVPI I GTRISDGEWLYADTDGILISR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPIAIAGTRISDGEWLYADTDGILISRTELSV 166
>gi|357507775|ref|XP_003624176.1| Regulator of ribonuclease-like protein [Medicago truncatula]
gi|217071150|gb|ACJ83935.1| unknown [Medicago truncatula]
gi|355499191|gb|AES80394.1| Regulator of ribonuclease-like protein [Medicago truncatula]
Length = 166
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/166 (94%), Positives = 161/166 (96%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLI+SGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVL+REFLEE
Sbjct: 1 MALVTTAEVCDANPQLILSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGG SLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRAL S
Sbjct: 61 KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKG+GEKHVPITI GTRI DGEWLYADTDGILISR ELSV
Sbjct: 121 HPMKANKKGMGEKHVPITIAGTRIGDGEWLYADTDGILISRTELSV 166
>gi|211906464|gb|ACJ11725.1| dimethylmenaquinone methyltransferase [Gossypium hirsutum]
Length = 166
Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/166 (95%), Positives = 161/166 (96%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRR VFSGPIVTLKVFEDNVLIREFLEE
Sbjct: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRPVFSGPIVTLKVFEDNVLIREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRAL S
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALHS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKGIGEKHVPITI GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIAGTRICDGEWLYADTDGILVSKTELSV 166
>gi|356531896|ref|XP_003534512.1| PREDICTED: regulator of ribonuclease-like protein 2-like [Glycine
max]
Length = 166
Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/166 (93%), Positives = 161/166 (96%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDANPQLI+SGELRALQP+FQIYGRRQVFSGPIVTLKVFEDNVL+REFLEE
Sbjct: 1 MAFVTTAEVCDANPQLILSGELRALQPVFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGG SLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKG+GEKHVP+ I GTRISDG+WLYADTDGILISR ELSV
Sbjct: 121 HPMKANKKGMGEKHVPVNIAGTRISDGDWLYADTDGILISRTELSV 166
>gi|224128794|ref|XP_002328968.1| predicted protein [Populus trichocarpa]
gi|222839202|gb|EEE77553.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/166 (95%), Positives = 161/166 (96%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCD NPQ IVSGELRALQPIFQIYGRRQVFSGP+VTLK FEDNVLIREFLEE
Sbjct: 1 MALVTTAEVCDTNPQQIVSGELRALQPIFQIYGRRQVFSGPVVTLKAFEDNVLIREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G+GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL S
Sbjct: 61 RGSGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL V
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELCV 166
>gi|351723477|ref|NP_001238048.1| uncharacterized protein LOC100500691 [Glycine max]
gi|255630950|gb|ACU15838.1| unknown [Glycine max]
Length = 166
Score = 318 bits (814), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/166 (92%), Positives = 159/166 (95%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDANPQLI+SGE RALQP+FQIYGRRQVFSGPIVTLKVFEDNVL+REFLEE
Sbjct: 1 MAFVTTAEVCDANPQLILSGEPRALQPVFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGG SLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKG+GEK VPI I GTRISDGEWLYADTDGILISR ELSV
Sbjct: 121 HPMKANKKGMGEKQVPINIAGTRISDGEWLYADTDGILISRTELSV 166
>gi|449442669|ref|XP_004139103.1| PREDICTED: regulator of ribonuclease-like protein 2-like [Cucumis
sativus]
Length = 166
Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/166 (92%), Positives = 160/166 (96%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1 MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKA KK +GEKHVPIT+ GTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166
>gi|449485342|ref|XP_004157139.1| PREDICTED: LOW QUALITY PROTEIN: regulator of ribonuclease-like
protein 2-like [Cucumis sativus]
Length = 166
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/166 (90%), Positives = 157/166 (94%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGR FSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1 MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRXPSFSGPVVTLKVFEDNVLIREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKA KK +GEKHVPIT+ GTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166
>gi|297597529|ref|NP_001044103.2| Os01g0722800 [Oryza sativa Japonica Group]
gi|18461241|dbj|BAB84438.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
[Oryza sativa Japonica Group]
gi|20160543|dbj|BAB89492.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
[Oryza sativa Japonica Group]
gi|125527546|gb|EAY75660.1| hypothetical protein OsI_03567 [Oryza sativa Indica Group]
gi|125571867|gb|EAZ13382.1| hypothetical protein OsJ_03301 [Oryza sativa Japonica Group]
gi|255673639|dbj|BAF06017.2| Os01g0722800 [Oryza sativa Japonica Group]
Length = 168
Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/163 (90%), Positives = 155/163 (95%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN LI++GELRALQPIFQIYGRRQVF+GPIVTLKV+EDNVLIREFLEEKG+
Sbjct: 6 LATAEVCDANADLIMNGELRALQPIFQIYGRRQVFAGPIVTLKVYEDNVLIREFLEEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCAILGGNPV QAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL SHPM
Sbjct: 66 GRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKGIGEKHVP+TI GTRI DGEWLYADTDGILISR EL+V
Sbjct: 126 KANKKGIGEKHVPVTIAGTRICDGEWLYADTDGILISRTELTV 168
>gi|218191618|gb|EEC74045.1| hypothetical protein OsI_09033 [Oryza sativa Indica Group]
Length = 168
Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/163 (88%), Positives = 154/163 (94%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN LI++GELRALQP+FQ+YGRRQVF+GPIVTLKV+EDNVL+REFLEEKG
Sbjct: 6 LATAEVCDANAHLIMNGELRALQPVFQVYGRRQVFAGPIVTLKVYEDNVLVREFLEEKGQ 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCAILGGNPV QAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL SHPM
Sbjct: 66 GRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKGIGEKHVP+TI GTRI DGEWLYADTDGILISR EL+V
Sbjct: 126 KANKKGIGEKHVPVTIAGTRICDGEWLYADTDGILISRTELTV 168
>gi|115448841|ref|NP_001048200.1| Os02g0761900 [Oryza sativa Japonica Group]
gi|46805895|dbj|BAD17208.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
[Oryza sativa Japonica Group]
gi|113537731|dbj|BAF10114.1| Os02g0761900 [Oryza sativa Japonica Group]
gi|215765102|dbj|BAG86799.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765540|dbj|BAG87237.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623718|gb|EEE57850.1| hypothetical protein OsJ_08478 [Oryza sativa Japonica Group]
Length = 168
Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 154/163 (94%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAE+CDAN LI++GELRALQP+FQ+YGRRQVF+GPIVTLKV+EDNVL+REFLEEKG
Sbjct: 6 LATAELCDANAHLIMNGELRALQPVFQVYGRRQVFAGPIVTLKVYEDNVLVREFLEEKGQ 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCAILGGNPV QAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL SHPM
Sbjct: 66 GRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKGIGEKHVP+TI GTRI DGEWLYADTDGILISR EL+V
Sbjct: 126 KANKKGIGEKHVPVTIAGTRICDGEWLYADTDGILISRTELTV 168
>gi|288300162|gb|ADC45384.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
protein [Cleistogenes songorica]
Length = 168
Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 155/163 (95%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDANP LI++GEL ALQPIFQIYGRRQVF+GPIVTLKV+EDNVLIREFLEEKG+
Sbjct: 6 LATAEVCDANPHLIMNGELCALQPIFQIYGRRQVFAGPIVTLKVYEDNVLIREFLEEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCAILGGNPV QAQNNGWAGIVVNGC+RDVDEINGCDIGVRAL SHPM
Sbjct: 66 GRVLVVDGGGSMRCAILGGNPVQQAQNNGWAGIVVNGCLRDVDEINGCDIGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKG+GEKHVP+TI GTRI DGEWLYADTDGIL+SR EL+V
Sbjct: 126 KANKKGMGEKHVPVTIAGTRICDGEWLYADTDGILVSRTELTV 168
>gi|357123403|ref|XP_003563400.1| PREDICTED: regulator of ribonuclease-like protein 2-like
[Brachypodium distachyon]
Length = 168
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/163 (88%), Positives = 152/163 (93%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN LI +GELRALQPIFQ+YGRRQVF+GPIVTLKVFEDNVL+REFLEEKG
Sbjct: 6 LATAEVCDANSHLITNGELRALQPIFQVYGRRQVFAGPIVTLKVFEDNVLVREFLEEKGQ 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCAILGGNPV QAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL SHPM
Sbjct: 66 GRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKG+GEKHVP+TI GTRI DGEWLYADTDGIL+SR EL V
Sbjct: 126 KANKKGMGEKHVPVTIAGTRICDGEWLYADTDGILVSRTELIV 168
>gi|226502502|ref|NP_001150289.1| regulator of ribonuclease activity A [Zea mays]
gi|195638112|gb|ACG38524.1| regulator of ribonuclease activity A [Zea mays]
gi|223975547|gb|ACN31961.1| unknown [Zea mays]
gi|413935086|gb|AFW69637.1| Regulator of ribonuclease activity A isoform 1 [Zea mays]
gi|413935087|gb|AFW69638.1| Regulator of ribonuclease activity A isoform 2 [Zea mays]
Length = 168
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/163 (86%), Positives = 155/163 (95%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDANP LI++GELRALQPIFQIYGRRQVF+GPIVTLKV+EDNVL+REFLEEKG+
Sbjct: 6 LATAEVCDANPHLIMNGELRALQPIFQIYGRRQVFAGPIVTLKVYEDNVLVREFLEEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCAILGGNPV QAQNNGWAGI+VNGCIRDVDEINGCDIGVRAL+SHPM
Sbjct: 66 GRVLVVDGGGSMRCAILGGNPVQQAQNNGWAGILVNGCIRDVDEINGCDIGVRALSSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKG+GEKHVP+ I GTRI DGEWLYAD DGIL+SR EL+V
Sbjct: 126 KANKKGMGEKHVPVNIAGTRICDGEWLYADPDGILVSRTELTV 168
>gi|149391267|gb|ABR25651.1| regulator of ribonuclease activity a [Oryza sativa Indica Group]
Length = 167
Score = 298 bits (763), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 153/163 (93%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN LI++GELRALQP+FQ+YGRRQVF+GPIVTLKV+EDNVL+REFLEEKG
Sbjct: 5 LATAEVCDANAHLIMNGELRALQPVFQVYGRRQVFAGPIVTLKVYEDNVLVREFLEEKGQ 64
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCAIL GNPV QAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL SHPM
Sbjct: 65 GRVLVVDGGGSLRCAILCGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPM 124
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKGIGEKHVP+TI GTRI DGEWLYADTDGILISR EL+V
Sbjct: 125 KANKKGIGEKHVPVTIAGTRICDGEWLYADTDGILISRTELTV 167
>gi|357123058|ref|XP_003563230.1| PREDICTED: regulator of ribonuclease-like protein 2-like isoform 1
[Brachypodium distachyon]
gi|357123060|ref|XP_003563231.1| PREDICTED: regulator of ribonuclease-like protein 2-like isoform 2
[Brachypodium distachyon]
Length = 168
Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/163 (86%), Positives = 151/163 (92%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN LI +GELRALQPIFQIYGRRQVF+GP+VTLKVFEDNVL+REFLEEKG
Sbjct: 6 LATAEVCDANSHLITNGELRALQPIFQIYGRRQVFAGPVVTLKVFEDNVLVREFLEEKGQ 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCAILGGNPV QAQNNGWAGIVVNGC+RDVDEINGCDIGVRAL SHPM
Sbjct: 66 GRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALGSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKG+GEKHVP+T+ GTR+ DGEWLYADTDGILIS EL V
Sbjct: 126 KANKKGVGEKHVPVTVAGTRVCDGEWLYADTDGILISSTELIV 168
>gi|15237348|ref|NP_197149.1| Regulator of ribonuclease-like protein 2 [Arabidopsis thaliana]
gi|30685861|ref|NP_850830.1| Regulator of ribonuclease-like protein 2 [Arabidopsis thaliana]
gi|297807671|ref|XP_002871719.1| dimethylmenaquinone methyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|17368893|sp|Q9FFE0.1|RRAA2_ARATH RecName: Full=Regulator of ribonuclease-like protein 2
gi|9759127|dbj|BAB09612.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
protein [Arabidopsis thaliana]
gi|26452507|dbj|BAC43338.1| putative S-adenosylmethionine:2- demethylmenaquinone
methyltransferase [Arabidopsis thaliana]
gi|28973323|gb|AAO63986.1| unknown protein [Arabidopsis thaliana]
gi|222424144|dbj|BAH20031.1| AT5G16450 [Arabidopsis thaliana]
gi|297317556|gb|EFH47978.1| dimethylmenaquinone methyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|332004910|gb|AED92293.1| Regulator of ribonuclease-like protein 2 [Arabidopsis thaliana]
gi|332004911|gb|AED92294.1| Regulator of ribonuclease-like protein 2 [Arabidopsis thaliana]
Length = 166
Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/166 (85%), Positives = 156/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN +LI SG+LRALQPIFQIYGRRQ+FSGP+VT+KVFEDN LIR+F+EE
Sbjct: 1 MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA+KKG+GE+ VP+ I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166
>gi|21537415|gb|AAM61756.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
protein [Arabidopsis thaliana]
Length = 166
Score = 294 bits (753), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/166 (85%), Positives = 155/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN +LI SG+LRALQPIFQIYGRRQ+FSGP+VT+KVFEDN LIR+F+EE
Sbjct: 1 MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA KKG+GE+ VP+ I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKARKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166
>gi|297832912|ref|XP_002884338.1| dimethylmenaquinone methyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330178|gb|EFH60597.1| dimethylmenaquinone methyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 166
Score = 294 bits (752), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 142/166 (85%), Positives = 155/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN +LI SG+LRALQP FQIYGRRQ+FSGP+VT+KVFEDN LIR FLEE
Sbjct: 1 MAFVTTAEVCDANQELIRSGQLRALQPNFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA+KKG+GE+ VP+ I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPLNIAGTRICDGEWLYADTDGILVSQIELSV 166
>gi|15232963|ref|NP_186926.1| Regulator of ribonuclease-like protein 1 [Arabidopsis thaliana]
gi|17369187|sp|Q9M8R9.1|RRAA1_ARATH RecName: Full=Regulator of ribonuclease-like protein 1
gi|6728985|gb|AAF26983.1|AC018363_28 putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Arabidopsis thaliana]
gi|21555774|gb|AAM63931.1| Putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase 1 [Arabidopsis thaliana]
gi|51971463|dbj|BAD44396.1| putative S-adenosylmethionine:2- demethylmenaquinone
methyltransferase [Arabidopsis thaliana]
gi|194708818|gb|ACF88493.1| At3g02770 [Arabidopsis thaliana]
gi|332640337|gb|AEE73858.1| Regulator of ribonuclease-like protein 1 [Arabidopsis thaliana]
Length = 166
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/166 (84%), Positives = 155/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN ++I SG+LRALQP+FQIYGRRQ+FSGP+VT+KVFEDN LIR FLEE
Sbjct: 1 MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA+KKG+GE+ V + I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166
>gi|242088449|ref|XP_002440057.1| hypothetical protein SORBIDRAFT_09g025235 [Sorghum bicolor]
gi|241945342|gb|EES18487.1| hypothetical protein SORBIDRAFT_09g025235 [Sorghum bicolor]
Length = 183
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 150/163 (92%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDANP LI++GELRALQPIFQIYGRRQVF+GPIVTLKV+EDNVLIREFLEEKG+
Sbjct: 6 LATAEVCDANPHLIMNGELRALQPIFQIYGRRQVFAGPIVTLKVYEDNVLIREFLEEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCAILGGNPV QAQNNGWAGI+VNGCIRDVDEINGCDIGVRAL SHPM
Sbjct: 66 GRVLVVDGGGSMRCAILGGNPVQQAQNNGWAGILVNGCIRDVDEINGCDIGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KANKKG+GEKHVP+ I GTRI DGEWLYADTDG I + L V
Sbjct: 126 KANKKGMGEKHVPVNIAGTRIYDGEWLYADTDGAAIDLSSLIV 168
>gi|297735262|emb|CBI17624.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 288 bits (736), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 145/166 (87%), Positives = 147/166 (88%), Gaps = 14/166 (8%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLIVSGELRALQP+FQIYGRR VFSGPIVTLKVFEDNVLIREFLEE
Sbjct: 40 MALVTTAEVCDANPQLIVSGELRALQPVFQIYGRRPVFSGPIVTLKVFEDNVLIREFLEE 99
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGW INGCDIGVRAL S
Sbjct: 100 KGNGRVLVVDGGGSMRCAILGGNPVVQAQNNGW--------------INGCDIGVRALNS 145
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMKANKKGIGEKHVPI I GTRISDGEWLYADTDGILISR ELSV
Sbjct: 146 HPMKANKKGIGEKHVPIAIAGTRISDGEWLYADTDGILISRTELSV 191
>gi|255640810|gb|ACU20688.1| unknown [Glycine max]
Length = 148
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/148 (92%), Positives = 144/148 (97%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDANPQLI+SGELRALQP+FQIYGRRQVFSGPIVTLKVFEDNVL+REFLEE
Sbjct: 1 MAFVTTAEVCDANPQLILSGELRALQPVFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGG SLRCAILGGNPV+QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGASLRCAILGGNPVIQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGE 148
HPMKANKKG+GEKHVP+ I GTRISDG+
Sbjct: 121 HPMKANKKGMGEKHVPVNIAGTRISDGD 148
>gi|226491520|ref|NP_001148311.1| regulator of ribonuclease activity A [Zea mays]
gi|195617414|gb|ACG30537.1| regulator of ribonuclease activity A [Zea mays]
Length = 168
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/163 (79%), Positives = 148/163 (90%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAE CDAN LI++G+LR+LQPIFQIYG RQ+F+GP+VTLK+FEDNVL+REFLEEKG+
Sbjct: 6 LATAEACDANAALIMNGDLRSLQPIFQIYGGRQIFAGPVVTLKIFEDNVLLREFLEEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVD GGS+RCA+LGGN QNNGWAGIVVNGCIRDVDEINGCD+GVRAL SHPM
Sbjct: 66 GRVLVVDAGGSMRCAVLGGNLAQLMQNNGWAGIVVNGCIRDVDEINGCDVGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+NKKG+GEKHVP+T GTRI DGEWLYAD+DGILISR+ELSV
Sbjct: 126 KSNKKGVGEKHVPVTFAGTRICDGEWLYADSDGILISRSELSV 168
>gi|195608760|gb|ACG26210.1| regulator of ribonuclease activity A [Zea mays]
gi|223974573|gb|ACN31474.1| unknown [Zea mays]
gi|414876314|tpg|DAA53445.1| TPA: hypothetical protein ZEAMMB73_524650 [Zea mays]
Length = 168
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/163 (78%), Positives = 148/163 (90%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAE CDAN LI++G+LR+LQPIF+IYG RQ+F+GP+VTLK+FEDNVL+REFLEEKG+
Sbjct: 6 LATAEACDANAALIMNGDLRSLQPIFRIYGGRQIFAGPVVTLKIFEDNVLLREFLEEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVD GGS+RCA+LGGN QNNGWAGIVVNGCIRDVDEINGCD+GVRAL SHPM
Sbjct: 66 GRVLVVDAGGSMRCAVLGGNLAQLMQNNGWAGIVVNGCIRDVDEINGCDVGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+NKKG+GEKHVP+T GTRI DGEWLYAD+DGILISR+ELSV
Sbjct: 126 KSNKKGVGEKHVPVTFAGTRICDGEWLYADSDGILISRSELSV 168
>gi|242056405|ref|XP_002457348.1| hypothetical protein SORBIDRAFT_03g005890 [Sorghum bicolor]
gi|241929323|gb|EES02468.1| hypothetical protein SORBIDRAFT_03g005890 [Sorghum bicolor]
Length = 168
Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/163 (77%), Positives = 148/163 (90%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAE CDAN LI++G+LRALQPIFQIYGRRQ+F+GP+VTLK+FEDNVL+REFLEEKG+
Sbjct: 6 LATAEACDANAALIMNGDLRALQPIFQIYGRRQIFAGPVVTLKIFEDNVLLREFLEEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVD GGS+RCA+LGGN AQNNGWAG+VVNGCIRDVDEINGCD+GVRAL S P+
Sbjct: 66 GRVLVVDAGGSMRCAVLGGNLAQLAQNNGWAGVVVNGCIRDVDEINGCDVGVRALNSLPI 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+NKKG+GEKH P+T GTRI DGEWLYAD+DGILISR+EL+V
Sbjct: 126 KSNKKGVGEKHAPVTFAGTRICDGEWLYADSDGILISRSELTV 168
>gi|255576633|ref|XP_002529206.1| Regulator of ribonuclease activity A, putative [Ricinus communis]
gi|223531324|gb|EEF33162.1| Regulator of ribonuclease activity A, putative [Ricinus communis]
Length = 166
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/166 (75%), Positives = 145/166 (87%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA V TAE CD+N L SG+LRALQP+F+IYG+R+ FSGPIVTLKVFEDNVL+RE LE
Sbjct: 1 MAAVATAEACDSNAALSASGDLRALQPVFKIYGQRRAFSGPIVTLKVFEDNVLVRELLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G GRVLV+DGGGS+RCA++GGN AQN GWAGI+VNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 RGEGRVLVIDGGGSMRCALVGGNLGQLAQNMGWAGIIVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK+NKKG+GEKHV + I GT I DGEWLYAD+DGILIS++ELS+
Sbjct: 121 HPMKSNKKGMGEKHVTVHIAGTLIRDGEWLYADSDGILISKSELSI 166
>gi|116784690|gb|ABK23439.1| unknown [Picea sitchensis]
Length = 166
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/166 (76%), Positives = 147/166 (88%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + T EVCD P+L+ +GELR LQPIFQIYGRR+ FSGP+VTLKVFEDNVL+R+FLEE
Sbjct: 1 MAALATTEVCDTYPRLVENGELRVLQPIFQIYGRRRAFSGPVVTLKVFEDNVLLRDFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+GNGRVLVVDGGGSLRCAILGGN VV AQNNGW+GI+V+GCIRDVDEIN CDIGVRAL S
Sbjct: 61 RGNGRVLVVDGGGSLRCAILGGNVVVSAQNNGWSGIIVSGCIRDVDEINRCDIGVRALTS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P+KA+KKG GEK+VPI I GTRI GEW YAD+DGIL+S+ ELS+
Sbjct: 121 NPLKASKKGAGEKNVPIYIAGTRILPGEWCYADSDGILVSQQELSL 166
>gi|326500142|dbj|BAJ90906.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/163 (76%), Positives = 142/163 (87%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN +I SGELRALQPIF+ YG R++F+GP+VT+KVFEDNVL+R LEEKG
Sbjct: 6 LATAEVCDANSHMITSGELRALQPIFRTYGGRRLFAGPVVTVKVFEDNVLVRALLEEKGE 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLR A+LGGN + AQNNGWAGIV+NGC+RDVDEINGCD+GVRAL SHPM
Sbjct: 66 GRVLVVDGGGSLRRALLGGNIAMLAQNNGWAGIVINGCVRDVDEINGCDVGVRALGSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K++KKG GEKHVP+TI G RI DGEWLYAD DGIL+S ELSV
Sbjct: 126 KSDKKGAGEKHVPVTIAGARICDGEWLYADADGILVSGTELSV 168
>gi|115448843|ref|NP_001048201.1| Os02g0762100 [Oryza sativa Japonica Group]
gi|46805897|dbj|BAD17210.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
[Oryza sativa Japonica Group]
gi|113537732|dbj|BAF10115.1| Os02g0762100 [Oryza sativa Japonica Group]
gi|215697120|dbj|BAG91114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765517|dbj|BAG87214.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 168
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/163 (77%), Positives = 142/163 (87%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN I++GELRAL PIF+IYGRRQVF+GP+ T+KVFEDNVL+RE L+EKG+
Sbjct: 6 LATAEVCDANSNPIIAGELRALPPIFKIYGRRQVFAGPVATVKVFEDNVLVRELLQEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCA+LGGN AQ NGW GIVVNGCIRDVDEINGCD+GVRAL SHPM
Sbjct: 66 GRVLVVDGGGSVRCALLGGNLAQLAQINGWVGIVVNGCIRDVDEINGCDVGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ KKG GEK VP+TI GTRI DGEWLYAD DGILISR EL+V
Sbjct: 126 KSGKKGAGEKRVPVTIEGTRICDGEWLYADADGILISRTELTV 168
>gi|125583778|gb|EAZ24709.1| hypothetical protein OsJ_08480 [Oryza sativa Japonica Group]
Length = 168
Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/163 (76%), Positives = 142/163 (87%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN I++GELRAL PIF+IYG+RQVF+GP+ T+KVFEDNVL+RE L+EKG+
Sbjct: 6 LATAEVCDANSNPIIAGELRALPPIFKIYGKRQVFAGPVATVKVFEDNVLVRELLQEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCA+LGGN AQ NGW GIVVNGCIRDVDEINGCD+GVRAL SHPM
Sbjct: 66 GRVLVVDGGGSVRCALLGGNLAQLAQINGWVGIVVNGCIRDVDEINGCDVGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ KKG GEK VP+TI GTRI DGEWLYAD DGILISR EL+V
Sbjct: 126 KSGKKGAGEKRVPVTIEGTRICDGEWLYADADGILISRTELTV 168
>gi|125541230|gb|EAY87625.1| hypothetical protein OsI_09036 [Oryza sativa Indica Group]
Length = 168
Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/163 (76%), Positives = 141/163 (86%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAEVCDAN I++GELRAL PIF+IYGRR VF+GP+ T+KVFEDNVL+RE L+EKG+
Sbjct: 6 LATAEVCDANSNPIIAGELRALPPIFKIYGRRLVFAGPVATVKVFEDNVLVRELLQEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCA+LGGN AQ NGW GIVVNGCIRDVDEINGCD+GVRAL SHPM
Sbjct: 66 GRVLVVDGGGSVRCALLGGNLAQLAQINGWVGIVVNGCIRDVDEINGCDVGVRALNSHPM 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ KKG GEK VP+TI GTRI DGEWLYAD DGILISR EL+V
Sbjct: 126 KSGKKGAGEKRVPVTIEGTRICDGEWLYADADGILISRTELTV 168
>gi|357446205|ref|XP_003593380.1| Regulator of ribonuclease-like protein [Medicago truncatula]
gi|355482428|gb|AES63631.1| Regulator of ribonuclease-like protein [Medicago truncatula]
Length = 686
Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 113/166 (68%), Positives = 135/166 (81%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + TAE+CD N + +G+LR L P+FQ YG+ Q FSGP VT+KVFEDNVL+RE LE
Sbjct: 521 MDSLPTAEICDTNATHLTNGDLRILHPVFQKYGQSQAFSGPAVTVKVFEDNVLVRELLET 580
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG GRVLVVDGGGS+RCA++GGN V AQN GW+GIVVNGCIRDVDEIN C +GVRALAS
Sbjct: 581 KGEGRVLVVDGGGSMRCALVGGNLVQLAQNKGWSGIVVNGCIRDVDEINLCQVGVRALAS 640
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+K+NK G GEKHV + +GGT I DGEWLYAD DGI++S+ ELS+
Sbjct: 641 HPLKSNKNGTGEKHVAVYVGGTFIRDGEWLYADNDGIIVSKFELSI 686
>gi|224122216|ref|XP_002330568.1| predicted protein [Populus trichocarpa]
gi|222872126|gb|EEF09257.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/166 (72%), Positives = 139/166 (83%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA +TTAE CD+N L+ SG+LR L PIF+IYG+ + FSGPI TLKVFEDNVL+RE LE
Sbjct: 1 MAFITTAEACDSNVPLLASGDLRVLPPIFKIYGQSRAFSGPIATLKVFEDNVLVRELLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G GRVLVVDGGGS+RCA++GGN AQ GWAGI+VNGCIRDVDEINGCDIGVRAL S
Sbjct: 61 EGEGRVLVVDGGGSMRCALVGGNLGQLAQTMGWAGILVNGCIRDVDEINGCDIGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K+ KKG+GEKHV + IGGT I DGEWLYAD+DGILISR ELS+
Sbjct: 121 HPTKSFKKGVGEKHVAVHIGGTLICDGEWLYADSDGILISRCELSL 166
>gi|225463540|ref|XP_002265968.1| PREDICTED: regulator of ribonuclease-like protein 3 [Vitis
vinifera]
gi|296090048|emb|CBI39867.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 138/166 (83%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TAEVCD+N + SG+LR LQPIFQ YG+ + FSGPIVTLKVFEDNVL+R LE
Sbjct: 1 MAALATAEVCDSNAAHLTSGDLRVLQPIFQSYGQCRAFSGPIVTLKVFEDNVLVRALLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G GRVLV+DGGGS+RCA++GGN AQN GWAGIVVNGCIRDVDEI CDIGVRAL +
Sbjct: 61 RGEGRVLVIDGGGSMRCALVGGNIGQLAQNMGWAGIVVNGCIRDVDEIKDCDIGVRALGA 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK+NKKGIGEKHVP+ I G I DGEWLYAD+DGIL+S+ ELS+
Sbjct: 121 HPMKSNKKGIGEKHVPVYIAGALIRDGEWLYADSDGILVSKFELSL 166
>gi|147859276|emb|CAN79693.1| hypothetical protein VITISV_040370 [Vitis vinifera]
Length = 166
Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 137/166 (82%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TAEVCD+N + SG+LR LQPIFQ YG + FSGPIVTLKVFEDNVL+R LE
Sbjct: 1 MAALATAEVCDSNAAHLTSGDLRVLQPIFQSYGHCRAFSGPIVTLKVFEDNVLVRALLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G GRVLV+DGGGS+RCA++GGN AQN GWAGIVVNGCIRDVDEI CDIGVRAL +
Sbjct: 61 RGEGRVLVIDGGGSMRCALVGGNIGQLAQNMGWAGIVVNGCIRDVDEIKDCDIGVRALGA 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK+NKKGIGEKHVP+ I G I DGEWLYAD+DGIL+S+ ELS+
Sbjct: 121 HPMKSNKKGIGEKHVPVYIAGALIRDGEWLYADSDGILVSKFELSL 166
>gi|15241161|ref|NP_200437.1| Regulator of ribonuclease-like protein 3 [Arabidopsis thaliana]
gi|17368897|sp|Q9FH13.1|RRAA3_ARATH RecName: Full=Regulator of ribonuclease-like protein 3
gi|9758753|dbj|BAB09117.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like
[Arabidopsis thaliana]
gi|38603850|gb|AAR24670.1| At5g56260 [Arabidopsis thaliana]
gi|38603934|gb|AAR24712.1| At5g56260 [Arabidopsis thaliana]
gi|332009359|gb|AED96742.1| Regulator of ribonuclease-like protein 3 [Arabidopsis thaliana]
Length = 166
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 141/166 (84%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGPIVTLKVFEDNVL+R LE
Sbjct: 1 MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG G VLV+DGGGS+RCA++GGN AQNNGW+GIVVNGC+RDVDEIN CD+GVRAL S
Sbjct: 61 KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P+K+ KKG GEK+VP+ IGGT I DGEWLYAD+DGILIS+ ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166
>gi|297796499|ref|XP_002866134.1| dimethylmenaquinone methyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297311969|gb|EFH42393.1| dimethylmenaquinone methyltransferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 166
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 140/166 (84%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVL+R LE
Sbjct: 1 MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPVVTLKVFEDNVLVRNQLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG G VLV+DGGGS+RCA++GGN AQNNGW+GIVVNGC+RDVDEIN CD+GVRAL S
Sbjct: 61 KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P+K+ KKG GEK+VP+ IGGT I DGEWLYAD+DGILIS ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISMTELSV 166
>gi|125541229|gb|EAY87624.1| hypothetical protein OsI_09035 [Oryza sativa Indica Group]
Length = 168
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/163 (72%), Positives = 137/163 (84%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA+V DAN Q I++GELRAL PIF+IYGRR++F+GP+ T+KVFE+NVL+RE L+EKG+
Sbjct: 6 LATADVWDANSQAIMNGELRALPPIFRIYGRRKIFAGPVTTVKVFEENVLVRELLQEKGH 65
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLV+DGGGS+ CA+LGGN A NGW GIVVNGCIRDVDEINGCDIGVRAL SHP
Sbjct: 66 GRVLVIDGGGSVHCALLGGNLAQLAHINGWVGIVVNGCIRDVDEINGCDIGVRALNSHPK 125
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K KK GEK VP+TI GTRI DGEWLYAD DGILISR EL+V
Sbjct: 126 KPGKKSAGEKRVPVTIEGTRICDGEWLYADADGILISRTELTV 168
>gi|449461084|ref|XP_004148273.1| PREDICTED: regulator of ribonuclease-like protein 3-like isoform 1
[Cucumis sativus]
gi|449461086|ref|XP_004148274.1| PREDICTED: regulator of ribonuclease-like protein 3-like isoform 2
[Cucumis sativus]
gi|449519717|ref|XP_004166881.1| PREDICTED: regulator of ribonuclease-like protein 3-like isoform 1
[Cucumis sativus]
gi|449519719|ref|XP_004166882.1| PREDICTED: regulator of ribonuclease-like protein 3-like isoform 2
[Cucumis sativus]
Length = 166
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 139/166 (83%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA TA+VCDAN + +G+LR LQP F+IYG+R+ FSG IVT+KVFEDNVL+R+ LE
Sbjct: 1 MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG GRVLV+DG GS RCA+LGGN AQNNGWAGIVVNGCIRDVDEIN CD+GVRAL +
Sbjct: 61 KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P+K+NKKG+GEKHV + IGGT I +GEWLYAD+DGIL+S+ ELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 166
>gi|388517379|gb|AFK46751.1| unknown [Lotus japonicus]
Length = 166
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 136/165 (82%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TA++CD+N +V+G++R L P+FQ YG+ + FSGP+VT+KV EDNVL+RE LE
Sbjct: 1 MAALPTADICDSNAASLVNGDVRILHPVFQSYGQTRAFSGPVVTVKVLEDNVLVREVLEM 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG GRVLV+DGGGS+RCA++GGN V AQ+ GWAG+VVNGC+RDVDEIN CD GVRALAS
Sbjct: 61 KGEGRVLVIDGGGSMRCALMGGNMVRLAQSMGWAGVVVNGCVRDVDEINECDFGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+P+K+ KKG GEKHVP+ + G I +GEWLYAD DGIL+S+ ELS
Sbjct: 121 YPLKSGKKGTGEKHVPVYVAGALIHEGEWLYADNDGILVSKFELS 165
>gi|116780837|gb|ABK21839.1| unknown [Picea sitchensis]
gi|224284558|gb|ACN40012.1| unknown [Picea sitchensis]
Length = 166
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 135/166 (81%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TAE+CD I G +R LQPIFQ YGRR F GP+ TLKVFEDNV++RE +EE
Sbjct: 1 MANLATAELCDTYQNHITDGGVRVLQPIFQSYGRRNSFCGPVATLKVFEDNVIVREMIEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G GRVLVVDGGGSLRCA+LGGN V AQNNGW G++VNGCIRDVDEIN CDIGVRALA+
Sbjct: 61 QGKGRVLVVDGGGSLRCALLGGNLAVLAQNNGWNGVIVNGCIRDVDEINRCDIGVRALAT 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+K+NKKG+G+K+ + IGGTRI+ GEW AD+DG++IS ELS+
Sbjct: 121 HPLKSNKKGVGDKNGVVFIGGTRIAHGEWCCADSDGVIISPTELSL 166
>gi|356549439|ref|XP_003543101.1| PREDICTED: regulator of ribonuclease-like protein 3-like [Glycine
max]
Length = 166
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 134/165 (81%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TAE+ DAN + S ++R L P+F++YG FSGP+VT+KVFEDNVL+RE LE
Sbjct: 1 MAALPTAELSDANATHVASCDVRVLHPVFKVYGGATAFSGPVVTVKVFEDNVLVRELLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG GRVLVVDGGGSLRCA++GGN + A N GWAGIVVNGCIRDVDEIN DIGVRALAS
Sbjct: 61 KGEGRVLVVDGGGSLRCALVGGNLALIAHNMGWAGIVVNGCIRDVDEINASDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
HP+++NKK GEK+VP+ +GGT I +GEWLYAD DGIL+S+ ELS
Sbjct: 121 HPLRSNKKRTGEKNVPVYVGGTFIREGEWLYADNDGILVSKFELS 165
>gi|357446201|ref|XP_003593378.1| Regulator of ribonuclease-like protein [Medicago truncatula]
gi|355482426|gb|AES63629.1| Regulator of ribonuclease-like protein [Medicago truncatula]
Length = 169
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 134/166 (80%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA TAE+CD N I SG+LR L P+FQIYG + FSGPIVT+KVFEDNVL RE LE
Sbjct: 1 MASPRTAEICDTNATHIASGDLRILHPVFQIYGHCRAFSGPIVTVKVFEDNVLARELLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG GRVLV+D GGS+RCA++GGN V AQN GW+GI+VNGC+RDVDEIN C +GVRAL S
Sbjct: 61 KGEGRVLVIDRGGSMRCALVGGNLVQLAQNTGWSGIIVNGCVRDVDEINLCQVGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P+ +N+KG GEKHV + +GGT I DGEWLYAD+DGI++S+ ELS+
Sbjct: 121 YPLGSNEKGTGEKHVDVYVGGTFIRDGEWLYADSDGIIVSKFELSI 166
>gi|351721653|ref|NP_001235681.1| uncharacterized protein LOC100500019 [Glycine max]
gi|255628545|gb|ACU14617.1| unknown [Glycine max]
Length = 166
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 136/165 (82%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TAE+ DAN + SG++R L P+F++YG+ FSGPIVT+KVFEDNVL+RE +E
Sbjct: 1 MAALPTAELSDANATHVASGDVRVLHPVFKVYGQATAFSGPIVTVKVFEDNVLVRELVET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG GRVLVVDGGGSLR A++GGN V A N GWAGIVVNGC+RDVD+IN C+IGVRALAS
Sbjct: 61 KGEGRVLVVDGGGSLRRALMGGNLVQIAYNMGWAGIVVNGCVRDVDDINACNIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
HP+++NKK GEK+VP+ +GGT I +GEWLYAD DGIL+S+ ELS
Sbjct: 121 HPLRSNKKRTGEKNVPVYVGGTFIREGEWLYADNDGILVSKFELS 165
>gi|255640592|gb|ACU20581.1| unknown [Glycine max]
Length = 166
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 133/165 (80%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TAE+ DAN + S ++R L P+F++YG FSGP+VT+KVFEDNVL+RE LE
Sbjct: 1 MAALPTAELSDANATHVASCDVRVLHPVFKVYGGATAFSGPVVTVKVFEDNVLVRELLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG GRVLVVDGGGSLRCA++GGN + A N GWAGIVVNGCIRDVDEIN DIGVRALAS
Sbjct: 61 KGEGRVLVVDGGGSLRCALVGGNLALIAHNMGWAGIVVNGCIRDVDEINASDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
HP+++NKK GEK+VP+ +GGT I +GEWLYAD DGIL+S+ E S
Sbjct: 121 HPLRSNKKRTGEKNVPVYVGGTFIREGEWLYADNDGILVSKFESS 165
>gi|388497860|gb|AFK36996.1| unknown [Medicago truncatula]
Length = 126
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/123 (91%), Positives = 117/123 (95%), Gaps = 2/123 (1%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLI+SGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVL+REFLEE
Sbjct: 1 MALVTTAEVCDANPQLILSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRA--L 118
KGNGRVLVVDGG SLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIG +
Sbjct: 61 KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGGESSWF 120
Query: 119 ASH 121
+SH
Sbjct: 121 SSH 123
>gi|388496872|gb|AFK36502.1| unknown [Lotus japonicus]
Length = 126
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/125 (87%), Positives = 118/125 (94%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MALVTTAEVCDANPQLI+SGE+RAL P+FQIYGRRQVFSGP+VTLKVFEDNVL+REFLEE
Sbjct: 1 MALVTTAEVCDANPQLILSGEVRALHPVFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIG + +
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGGESSSF 120
Query: 121 HPMKA 125
P ++
Sbjct: 121 TPHES 125
>gi|409405925|ref|ZP_11254387.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Herbaspirillum sp. GW103]
gi|386434474|gb|EIJ47299.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Herbaspirillum sp. GW103]
Length = 166
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 125/164 (76%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+A T ++CDAN + +G L L PIF +GRRQVF+GP TLKVFEDNVL+R+ LE
Sbjct: 3 LASFATCDLCDANEDKLAAGTLHVLPPIFASFGRRQVFAGPARTLKVFEDNVLVRKTLET 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNG+VLVVDGGGSLRCA++GGN AQ+NGWAGI+VNGC+RD E+N C++G+RALA+
Sbjct: 63 PGNGQVLVVDGGGSLRCALVGGNLAQLAQDNGWAGILVNGCVRDAAELNACEVGIRALAT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP ++ +KG G+ + + I G + G+W+YAD DG+L+SR++L
Sbjct: 123 HPQRSFRKGAGDADIKVGIAGVAVHPGDWIYADVDGVLVSRSQL 166
>gi|415902606|ref|ZP_11552109.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
protein [Herbaspirillum frisingense GSF30]
gi|407763847|gb|EKF72439.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
protein [Herbaspirillum frisingense GSF30]
Length = 164
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 120/164 (73%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDAN + SG L L PIF +GRRQ FSGP TLKVFEDNVL+R LE
Sbjct: 1 MMSFATCDLCDANEDKLASGTLHVLPPIFASFGRRQAFSGPARTLKVFEDNVLVRATLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNG+VLVVDGGGSLRCA++GGN AQ+NGWAGI+VNGC+RD E+N CD+G+RALAS
Sbjct: 61 PGNGQVLVVDGGGSLRCALVGGNLAQLAQDNGWAGILVNGCVRDAAELNACDVGIRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP ++ +KG G+ + + I G + G+W+YAD DG+L++R L
Sbjct: 121 HPQRSFRKGAGDADIKVGIAGVAVYPGDWIYADVDGVLVARTPL 164
>gi|302819063|ref|XP_002991203.1| hypothetical protein SELMODRAFT_133099 [Selaginella moellendorffii]
gi|300141031|gb|EFJ07747.1| hypothetical protein SELMODRAFT_133099 [Selaginella moellendorffii]
Length = 162
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Query: 6 TAEVCDAN-PQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CD ++I G +R L P FQ+YG+R FSGP+ TLKVFEDN L+R LE++G+G
Sbjct: 3 TTDLCDKYYEEIITGGTVRVLAPAFQVYGKRCSFSGPVTTLKVFEDNSLVRAALEQQGDG 62
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVDGGGSLRCA+LGGN A NGWAGI+VNGC+RDV+EIN D+GVRALA HP+K
Sbjct: 63 KVLVVDGGGSLRCALLGGNLAAMASTNGWAGILVNGCVRDVEEINAVDVGVRALAPHPLK 122
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ K+G GEK V + GG RI GEW Y+D DGILI+ +L
Sbjct: 123 SFKRGQGEKDVAVVFGGVRILPGEWCYSDMDGILIANKKL 162
>gi|302819190|ref|XP_002991266.1| hypothetical protein SELMODRAFT_133175 [Selaginella moellendorffii]
gi|300140977|gb|EFJ07694.1| hypothetical protein SELMODRAFT_133175 [Selaginella moellendorffii]
Length = 162
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 122/160 (76%), Gaps = 1/160 (0%)
Query: 6 TAEVCDAN-PQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CD ++I G +R L P FQ+YG+R+ FSGP+ TLKVFEDN L+R LE++G+G
Sbjct: 3 TTDLCDKYYEEIITGGTVRVLAPAFQVYGKRRSFSGPVTTLKVFEDNSLVRAALEQQGDG 62
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVDGGGSLRCA+LGGN A NGWAGI+VNGC+RDV+EIN ++GVRALA HP+K
Sbjct: 63 KVLVVDGGGSLRCALLGGNLAAMASTNGWAGILVNGCVRDVEEINAVEVGVRALAPHPLK 122
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ K+G GEK V + GG RI GEW Y+D DGILI+ +L
Sbjct: 123 SFKRGQGEKDVAVVFGGVRILPGEWCYSDIDGILIANKKL 162
>gi|416947713|ref|ZP_11935117.1| ribonuclease activity regulator protein RraA [Burkholderia sp.
TJI49]
gi|325523609|gb|EGD01899.1| ribonuclease activity regulator protein RraA [Burkholderia sp.
TJI49]
Length = 164
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M L TT ++CDA+ L+ +G LR L+P + YG F+GP TLK+FEDN L+R LE+
Sbjct: 1 MTLATT-DLCDAHEDLLAAGTLRVLEPALRAYGGAARFAGPAATLKLFEDNTLVRAALEQ 59
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGGSLRCA++GGN A+ N WAGIVV GC+RD E+ C +GV ALA+
Sbjct: 60 DGGGRVLVVDGGGSLRCALVGGNLGALAEKNHWAGIVVYGCVRDSAELRACKVGVLALAT 119
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
HP K++K+G+GE+ VP+T+ GTRI+ GEW+YAD DG+L+S L+
Sbjct: 120 HPRKSDKRGVGERDVPVTVLGTRIAPGEWIYADEDGVLVSATALT 164
>gi|167581439|ref|ZP_02374313.1| ribonuclease activity regulator protein RraA [Burkholderia
thailandensis TXDOH]
Length = 165
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 121/162 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN + + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDANEERLAAGTLRVLEPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRAGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K++K+G G VP+ + GTRI+ G+W+YAD DGIL+S A L
Sbjct: 122 RKSDKRGAGVSDVPVDVRGTRIAPGDWIYADADGILVSDAAL 163
>gi|221198358|ref|ZP_03571404.1| regulator of ribonuclease activity A [Burkholderia multivorans
CGD2M]
gi|221208297|ref|ZP_03581301.1| regulator of ribonuclease activity A [Burkholderia multivorans
CGD2]
gi|421469862|ref|ZP_15918290.1| RraA family [Burkholderia multivorans ATCC BAA-247]
gi|221171945|gb|EEE04388.1| regulator of ribonuclease activity A [Burkholderia multivorans
CGD2]
gi|221182290|gb|EEE14691.1| regulator of ribonuclease activity A [Burkholderia multivorans
CGD2M]
gi|400228944|gb|EJO58830.1| RraA family [Burkholderia multivorans ATCC BAA-247]
Length = 164
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 118/160 (73%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + +G LR LQP + YG F+GP TLKVFEDN L+R LE+ G GR
Sbjct: 5 TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQNGGGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG SLRCA++GGN A+ NGWAGIVV+GC+RD E+ C +GV ALA+HP K+
Sbjct: 65 VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+K+G GE+ VP+T+ GTRI+ GEW+YAD DG+L+S L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164
>gi|161524396|ref|YP_001579408.1| ribonuclease activity regulator protein RraA [Burkholderia
multivorans ATCC 17616]
gi|189350849|ref|YP_001946477.1| ribonuclease activity regulator protein RraA [Burkholderia
multivorans ATCC 17616]
gi|221215421|ref|ZP_03588385.1| regulator of ribonuclease activity A [Burkholderia multivorans
CGD1]
gi|421476560|ref|ZP_15924437.1| RraA family [Burkholderia multivorans CF2]
gi|226703213|sp|A9AHQ6.1|RRAAH_BURM1 RecName: Full=Putative regulator of ribonuclease activity
gi|160341825|gb|ABX14911.1| regulator of ribonuclease activity A [Burkholderia multivorans ATCC
17616]
gi|189334871|dbj|BAG43941.1| regulator of ribonuclease activity A [Burkholderia multivorans ATCC
17616]
gi|221164605|gb|EED97087.1| regulator of ribonuclease activity A [Burkholderia multivorans
CGD1]
gi|400228096|gb|EJO58053.1| RraA family [Burkholderia multivorans CF2]
Length = 164
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 118/160 (73%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + +G LR LQP + YG F+GP TLKVFEDN L+R LE+ G GR
Sbjct: 5 TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG SLRCA++GGN A+ NGWAGIVV+GC+RD E+ C +GV ALA+HP K+
Sbjct: 65 VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+K+G GE+ VP+T+ GTRI+ GEW+YAD DG+L+S L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164
>gi|300311428|ref|YP_003775520.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Herbaspirillum seropedicae SmR1]
gi|124483532|emb|CAM32639.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
protein [Herbaspirillum seropedicae]
gi|300074213|gb|ADJ63612.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
protein [Herbaspirillum seropedicae SmR1]
Length = 163
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 117/160 (73%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CDA+ + +G L L PIF +GR+Q F GP TLKVFEDNVL+R LE G G
Sbjct: 4 ATCDLCDAHEDKLAAGTLHVLPPIFASFGRKQSFCGPARTLKVFEDNVLVRATLETPGQG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLVVDGGGSLRCA++GGN AQ+NGWAGI+VNGC+RD E+N C++G+RALA+HP +
Sbjct: 64 HVLVVDGGGSLRCALVGGNLAQLAQDNGWAGILVNGCVRDAAELNACEVGIRALATHPQR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ +KG G+ + + I G + G+W+YAD DG+L+SR+ L
Sbjct: 124 SFRKGAGDADIKVGIAGVAVYPGDWIYADVDGVLVSRSAL 163
>gi|73541651|ref|YP_296171.1| ribonuclease activity regulator protein RraA [Ralstonia eutropha
JMP134]
gi|123624765|sp|Q46ZV6.1|RRAA_CUPPJ RecName: Full=Putative regulator of ribonuclease activity
gi|72119064|gb|AAZ61327.1| Protein of unknown function 1935 [Ralstonia eutropha JMP134]
Length = 165
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 117/159 (73%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDAN + G LR + P+F+ +G++Q F+GP TLK+FEDN L+RE LE G GR
Sbjct: 5 TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA++GGN + A+ NGW GI+VNGC+RD E++ CDIG+RALA+HP K+
Sbjct: 65 VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ V + + G + G W+Y D DG+L+S +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163
>gi|374370024|ref|ZP_09628038.1| ribonuclease activity regulator protein RraA [Cupriavidus
basilensis OR16]
gi|373098407|gb|EHP39514.1| ribonuclease activity regulator protein RraA [Cupriavidus
basilensis OR16]
Length = 165
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M+ TT ++CDAN + G LR L P+FQ +G+R FSGP TLKVFEDN L+RE +E
Sbjct: 1 MSFATT-DLCDANEARLADGSLRVLSPVFQHFGKRAAFSGPAATLKVFEDNSLVREAVES 59
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRVLVVDGGGSLRCA++GGN V A+ NGW GI+V+GC+RD E+ CDIG+RALA
Sbjct: 60 PGNGRVLVVDGGGSLRCALVGGNLGVLAEKNGWVGIIVHGCVRDSGELAVCDIGLRALAL 119
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP K+ ++ +GE+ V + + G + G W+YAD DG+L++ +L
Sbjct: 120 HPQKSQRRNVGEREVTVQMPGAVVRPGNWIYADADGVLVADTKL 163
>gi|167563231|ref|ZP_02356147.1| ribonuclease activity regulator protein RraA [Burkholderia
oklahomensis EO147]
Length = 165
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 118/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDANEGRLAAGTLRVLEPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGALAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G+G VP+ + G RI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGVGVSDVPVDVRGARIVPGDWIYADADGVLVS 159
>gi|390568871|ref|ZP_10249163.1| ribonuclease activity regulator protein RraA [Burkholderia terrae
BS001]
gi|389939220|gb|EIN01057.1| ribonuclease activity regulator protein RraA [Burkholderia terrae
BS001]
Length = 164
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 120/160 (75%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++CDA+ + +G LR L P+F +GR F G +VTLKVFEDN L+R LEEKG G
Sbjct: 4 ATADLCDAHEDQLAAGTLRVLDPVFNRFGRASCFGGEVVTLKVFEDNTLVRATLEEKGAG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLV+DGGGSLRCA++GGN + NGWAGIVV GC+RDV E+N C+IGV ALA+HP +
Sbjct: 64 RVLVIDGGGSLRCALVGGNLGKLGEKNGWAGIVVFGCVRDVLELNECNIGVVALATHPQR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ K+G GE+ VP+ + G+ + GEW+YAD+DG++++ A L
Sbjct: 124 SEKRGGGERDVPVRLPGSAVRPGEWVYADSDGVVVASAPL 163
>gi|420252770|ref|ZP_14755867.1| RraA family protein [Burkholderia sp. BT03]
gi|398053801|gb|EJL45958.1| RraA family protein [Burkholderia sp. BT03]
Length = 164
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 119/160 (74%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++CDA+ + +G LR L P+F +GR F G VTLKVFEDN L+R LEEKG G
Sbjct: 4 ATADLCDAHEDQLAAGTLRVLDPVFSRFGRASCFGGEAVTLKVFEDNTLVRATLEEKGAG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLV+DGGGSLRCA++GGN + NGWAG+VV GC+RDV E+N C+IGV ALA+HP +
Sbjct: 64 RVLVIDGGGSLRCALVGGNLGKLGEKNGWAGLVVFGCVRDVLELNECNIGVVALATHPQR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ K+G GE+ VP+ + G+ + GEW+YAD+DG+L++ A L
Sbjct: 124 SEKRGGGERDVPVRLPGSAVRPGEWVYADSDGVLVASAPL 163
>gi|167586816|ref|ZP_02379204.1| regulator of ribonuclease activity A [Burkholderia ubonensis Bu]
Length = 165
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 118/165 (71%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA+ + +G LR L+P + YG F+GP TLK+FEDN L+R LE+
Sbjct: 1 MTTFATTDLCDAHEDQLAAGALRVLEPALRPYGGAARFAGPAATLKLFEDNTLVRAALEQ 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGGS RCA++GGN A+ N WAG+VV GC+RD E+ C++GV ALA+
Sbjct: 61 DGAGRVLVVDGGGSRRCALVGGNLGALAEKNHWAGVVVYGCVRDSAELRACNVGVLALAT 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
HP K++K+G GE+ VP+T+ GTRI+ GEW+YAD DG+L+S L+
Sbjct: 121 HPRKSDKRGAGERDVPVTVLGTRIAPGEWIYADEDGVLVSATPLT 165
>gi|167837080|ref|ZP_02463963.1| ribonuclease activity regulator protein RraA [Burkholderia
thailandensis MSMB43]
Length = 165
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN + +G LR L P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDANEDRLAAGTLRVLAPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQGG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD+DE+ C GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDLDELAECRAGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G VP+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDVPVDVRGTRIVPGDWIYADADGVLVS 159
>gi|83721353|ref|YP_442516.1| ribonuclease activity regulator protein RraA [Burkholderia
thailandensis E264]
gi|167619549|ref|ZP_02388180.1| ribonuclease activity regulator protein RraA [Burkholderia
thailandensis Bt4]
gi|257138723|ref|ZP_05586985.1| ribonuclease activity regulator protein RraA [Burkholderia
thailandensis E264]
gi|123536992|sp|Q2SX33.1|RRAAH_BURTA RecName: Full=Putative regulator of ribonuclease activity
gi|83655178|gb|ABC39241.1| regulator of ribonuclease activity A [Burkholderia thailandensis
E264]
Length = 165
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 119/162 (73%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN + + +G LR ++P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDANEERLAAGTLRVIEPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGW GIVVNGC+RD E+ C GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWVGIVVNGCVRDSAELAECRAGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K++K+G G VP+ + GTRI+ G+W+YAD DGIL+S A L
Sbjct: 122 RKSDKRGAGVSDVPVDVRGTRIAPGDWIYADADGILVSDAAL 163
>gi|424903662|ref|ZP_18327175.1| ribonuclease activity regulator protein RraA [Burkholderia
thailandensis MSMB43]
gi|390931535|gb|EIP88936.1| ribonuclease activity regulator protein RraA [Burkholderia
thailandensis MSMB43]
Length = 164
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN + +G LR L P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 1 MFATTDLCDANEDRLAAGTLRVLAPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQGG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD+DE+ C GV ALA+HP
Sbjct: 61 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDLDELAECRAGVLALAAHP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G VP+ + GTRI G+W+YAD DG+L+S
Sbjct: 121 RKSDKRGAGVSDVPVDVRGTRIVPGDWIYADADGVLVS 158
>gi|167570412|ref|ZP_02363286.1| ribonuclease activity regulator protein RraA [Burkholderia
oklahomensis C6786]
Length = 165
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDANEGRLAAGTLRVLEPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV LA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGALAEKNGWAGIVVNGCVRDSDELAECRVGVLGLAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G+G VP+ + G RI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGVGVSDVPVDVRGARIVPGDWIYADADGVLVS 159
>gi|53719803|ref|YP_108789.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei K96243]
gi|53724118|ref|YP_103233.1| ribonuclease activity regulator protein RraA [Burkholderia mallei
ATCC 23344]
gi|67639142|ref|ZP_00438039.1| regulator of ribonuclease activity A [Burkholderia mallei GB8 horse
4]
gi|76808767|ref|YP_334010.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1710b]
gi|121598284|ref|YP_993411.1| ribonuclease activity regulator protein RraA [Burkholderia mallei
SAVP1]
gi|124385893|ref|YP_001029154.1| ribonuclease activity regulator protein RraA [Burkholderia mallei
NCTC 10229]
gi|126441001|ref|YP_001059509.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 668]
gi|126450601|ref|YP_001080919.1| ribonuclease activity regulator protein RraA [Burkholderia mallei
NCTC 10247]
gi|126451685|ref|YP_001066790.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1106a]
gi|134277032|ref|ZP_01763747.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
305]
gi|166999664|ref|ZP_02265499.1| regulator of ribonuclease activity A [Burkholderia mallei PRL-20]
gi|167739216|ref|ZP_02411990.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 14]
gi|167816429|ref|ZP_02448109.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 91]
gi|167824810|ref|ZP_02456281.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 9]
gi|167846338|ref|ZP_02471846.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei B7210]
gi|167894918|ref|ZP_02482320.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 7894]
gi|167903306|ref|ZP_02490511.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei NCTC 13177]
gi|167911549|ref|ZP_02498640.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 112]
gi|167919558|ref|ZP_02506649.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei BCC215]
gi|217421467|ref|ZP_03452971.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
576]
gi|226198974|ref|ZP_03794537.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
Pakistan 9]
gi|237812847|ref|YP_002897298.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei MSHR346]
gi|242314563|ref|ZP_04813579.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1106b]
gi|254177676|ref|ZP_04884331.1| regulator of ribonuclease activity A [Burkholderia mallei ATCC
10399]
gi|254189330|ref|ZP_04895841.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
Pasteur 52237]
gi|254197587|ref|ZP_04904009.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
S13]
gi|254200182|ref|ZP_04906548.1| regulator of ribonuclease activity A [Burkholderia mallei FMH]
gi|254206520|ref|ZP_04912872.1| regulator of ribonuclease activity A [Burkholderia mallei JHU]
gi|254261766|ref|ZP_04952820.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1710a]
gi|254297172|ref|ZP_04964625.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
406e]
gi|254358068|ref|ZP_04974341.1| regulator of ribonuclease activity A [Burkholderia mallei
2002721280]
gi|386861293|ref|YP_006274242.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1026b]
gi|403519221|ref|YP_006653355.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei BPC006]
gi|418382701|ref|ZP_12966636.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 354a]
gi|418538451|ref|ZP_13104060.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1026a]
gi|418540508|ref|ZP_13106045.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1258a]
gi|418546757|ref|ZP_13111952.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1258b]
gi|418553000|ref|ZP_13117842.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 354e]
gi|61215845|sp|Q62J86.1|RRAAH_BURMA RecName: Full=Putative regulator of ribonuclease activity
gi|61215859|sp|Q63SX7.1|RRAAH_BURPS RecName: Full=Putative regulator of ribonuclease activity
gi|123598698|sp|Q3JQZ3.1|RRAAH_BURP1 RecName: Full=Putative regulator of ribonuclease activity
gi|166230377|sp|A3MKY3.1|RRAAH_BURM7 RecName: Full=Putative regulator of ribonuclease activity
gi|166230378|sp|A2SB35.1|RRAAH_BURM9 RecName: Full=Putative regulator of ribonuclease activity
gi|166230379|sp|A1V5A8.1|RRAAH_BURMS RecName: Full=Putative regulator of ribonuclease activity
gi|166230380|sp|A3NWR9.1|RRAAH_BURP0 RecName: Full=Putative regulator of ribonuclease activity
gi|166230381|sp|A3NAY8.1|RRAAH_BURP6 RecName: Full=Putative regulator of ribonuclease activity
gi|52210217|emb|CAH36196.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Burkholderia pseudomallei K96243]
gi|52427541|gb|AAU48134.1| protein of unknown function [Burkholderia mallei ATCC 23344]
gi|76578220|gb|ABA47695.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1710b]
gi|121227094|gb|ABM49612.1| protein of unknown function [Burkholderia mallei SAVP1]
gi|124293913|gb|ABN03182.1| regulator of ribonuclease activity A [Burkholderia mallei NCTC
10229]
gi|126220494|gb|ABN84000.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
668]
gi|126225327|gb|ABN88867.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1106a]
gi|126243471|gb|ABO06564.1| regulator of ribonuclease activity A [Burkholderia mallei NCTC
10247]
gi|134250682|gb|EBA50761.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
305]
gi|147749778|gb|EDK56852.1| regulator of ribonuclease activity A [Burkholderia mallei FMH]
gi|147753963|gb|EDK61028.1| regulator of ribonuclease activity A [Burkholderia mallei JHU]
gi|148027195|gb|EDK85216.1| regulator of ribonuclease activity A [Burkholderia mallei
2002721280]
gi|157806929|gb|EDO84099.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
406e]
gi|157937009|gb|EDO92679.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
Pasteur 52237]
gi|160698715|gb|EDP88685.1| regulator of ribonuclease activity A [Burkholderia mallei ATCC
10399]
gi|169654328|gb|EDS87021.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
S13]
gi|217395209|gb|EEC35227.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
576]
gi|225929074|gb|EEH25098.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
Pakistan 9]
gi|237503106|gb|ACQ95424.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
MSHR346]
gi|238519684|gb|EEP83153.1| regulator of ribonuclease activity A [Burkholderia mallei GB8 horse
4]
gi|242137802|gb|EES24204.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1106b]
gi|243064314|gb|EES46500.1| regulator of ribonuclease activity A [Burkholderia mallei PRL-20]
gi|254220455|gb|EET09839.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1710a]
gi|385347737|gb|EIF54387.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1026a]
gi|385361719|gb|EIF67597.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1258a]
gi|385363106|gb|EIF68887.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1258b]
gi|385372270|gb|EIF77392.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 354e]
gi|385377103|gb|EIF81722.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 354a]
gi|385658421|gb|AFI65844.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei 1026b]
gi|403074864|gb|AFR16444.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei BPC006]
Length = 165
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>gi|254179285|ref|ZP_04885884.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1655]
gi|184209825|gb|EDU06868.1| regulator of ribonuclease activity A [Burkholderia pseudomallei
1655]
Length = 164
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 1 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 61 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 121 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 158
>gi|167720214|ref|ZP_02403450.1| ribonuclease activity regulator protein RraA [Burkholderia
pseudomallei DM98]
Length = 165
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSGAPVDVRGTRIVPGDWIYADADGVLVS 159
>gi|194289869|ref|YP_002005776.1| ribonuclease activity regulator protein rraa [Cupriavidus
taiwanensis LMG 19424]
gi|226703216|sp|B3R2J3.1|RRAAH_CUPTR RecName: Full=Putative regulator of ribonuclease activity
gi|193223704|emb|CAQ69711.1| ribonuclease E (RNase E) inhibitor protein [Cupriavidus taiwanensis
LMG 19424]
Length = 165
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 114/160 (71%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + G LR + P+F+ +G++ F+GP TLKVFEDN L+R LE G GR
Sbjct: 5 TTDLCDAHEDRLAEGTLRVMAPVFRAFGKQPAFAGPAATLKVFEDNSLVRATLESPGRGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGSLRCA++GGN + A+ NGW GIVVNGCIRD E++ CDIG+RALA+HP K+
Sbjct: 65 VLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAAHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ +GE V + + G + G W+Y D DGIL++ +L
Sbjct: 125 QKRNVGESEVTVQMPGAVVRPGNWIYVDVDGILVADDKLE 164
>gi|94310324|ref|YP_583534.1| ribonuclease activity regulator protein RraA [Cupriavidus
metallidurans CH34]
gi|93354176|gb|ABF08265.1| ribonuclease E (RNase E) inhibitor protein [Cupriavidus
metallidurans CH34]
Length = 170
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 113/159 (71%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDAN + G LR L P F +G+R FSGP VTLKVFEDN ++R LE G GR
Sbjct: 9 TTDICDANEDRLADGSLRVLTPGFLHFGKRMAFSGPAVTLKVFEDNSMVRATLETPGAGR 68
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+RCA++GG V A+ NGWAGI+VNGC+RD +E+ CD+G+RAL HP K+
Sbjct: 69 VLVVDGGGSMRCALVGGMLGVLAEKNGWAGIIVNGCVRDSEELKVCDVGIRALGVHPQKS 128
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ +G++ V + + G + G W+YAD DG+L+S +L
Sbjct: 129 QKRNVGQEDVTVQMPGAVVRPGNWIYADADGVLVSDEKL 167
>gi|149927830|ref|ZP_01916081.1| ribonuclease activity regulator protein RraA [Limnobacter sp.
MED105]
gi|149823452|gb|EDM82683.1| ribonuclease activity regulator protein RraA [Limnobacter sp.
MED105]
Length = 163
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 117/162 (72%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN I +G LR ++P+FQ +G + F G TLKVFEDN ++R LE+ G
Sbjct: 1 MTPTTDLCDANEDKIAAGTLRVVEPMFQSWGLKSSFMGQAHTLKVFEDNSMVRSALEKDG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G+VLVVDGGGS+RCA++GGN + A+ N WAGIVV GC+RD E++ CD+G+RAL +HP
Sbjct: 61 QGKVLVVDGGGSMRCALVGGNLGMLAEKNNWAGIVVYGCVRDTLELDECDVGIRALGTHP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
MK+ K+GIG +++ + + T + G W+YAD DG+LIS + L
Sbjct: 121 MKSQKRGIGHENIDVALSFTTVRPGNWVYADEDGVLISDSAL 162
>gi|186476132|ref|YP_001857602.1| ribonuclease activity regulator protein RraA [Burkholderia phymatum
STM815]
gi|226703214|sp|B2JIG2.1|RRAAH_BURP8 RecName: Full=Putative regulator of ribonuclease activity
gi|184192591|gb|ACC70556.1| regulator of ribonuclease activity A [Burkholderia phymatum STM815]
Length = 164
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 116/159 (72%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDA+ + +G LR L P+F +GR F G VTLKVFEDN L+R LEEKG R
Sbjct: 5 TADLCDAHEDQLTAGTLRVLDPVFSRFGRASRFGGEAVTLKVFEDNTLVRATLEEKGVAR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA++GGN + NGWAGIVV GC+RD E+N C++G+ ALA+HP ++
Sbjct: 65 VLVVDGGGSLRCALVGGNLGKLGEKNGWAGIVVFGCVRDTLELNECNLGIIALATHPQRS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ V + + G+ + GEW+YAD+DG+L+S A L
Sbjct: 125 QKRGGGERDVSLRLPGSVVRPGEWIYADSDGVLVSSAPL 163
>gi|385209067|ref|ZP_10035935.1| RraA family protein [Burkholderia sp. Ch1-1]
gi|385181405|gb|EIF30681.1| RraA family protein [Burkholderia sp. Ch1-1]
Length = 164
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 114/161 (70%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++CDA+ + G LR L P+F ++ R + FSG VTLKVFEDN L+R LEEKG G
Sbjct: 4 ATADLCDAHEDQLALGTLRVLDPVFHLFSRAECFSGEAVTLKVFEDNALVRATLEEKGAG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLRCA++GGN AQ NGWAGIV+NGC+RD E+N ++G+ ALA+ P +
Sbjct: 64 RVLVVDGGGSLRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G GE+ V + + G + GEW+Y D+DG+L++ A L
Sbjct: 124 GQKLGTGERGVAVQLPGALVRPGEWIYVDSDGVLVASAALK 164
>gi|113868206|ref|YP_726695.1| ribonuclease activity regulator protein RraA [Ralstonia eutropha
H16]
gi|123032909|sp|Q0K9J4.1|RRAA_CUPNH RecName: Full=Putative regulator of ribonuclease activity
gi|113526982|emb|CAJ93327.1| demethylmenaquinone methyltransferase [Ralstonia eutropha H16]
Length = 165
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 112/159 (70%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + G LR + P+F+ +G++ F+GP TLKVFEDN L+R LE G GR
Sbjct: 5 TTDLCDAHEDRLADGTLRVMAPVFRAFGKQGAFAGPAATLKVFEDNSLVRTALEAPGQGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGSLRCA++GGN + A+ NGW GIVVNGCIRD E++ CDIG+RALA HP K+
Sbjct: 65 VLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAVHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ +GE V + + G + G W+Y D DG+L+S L
Sbjct: 125 QKRNVGESDVAVQMPGAVVRPGNWIYVDADGVLVSDERL 163
>gi|187924470|ref|YP_001896112.1| ribonuclease activity regulator protein RraA [Burkholderia
phytofirmans PsJN]
gi|226703215|sp|B2SXN2.1|RRAAH_BURPP RecName: Full=Putative regulator of ribonuclease activity
gi|187715664|gb|ACD16888.1| regulator of ribonuclease activity A [Burkholderia phytofirmans
PsJN]
Length = 164
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 115/161 (71%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++CDA+ + G LR L+P+F ++ R + FSG VTLKVFEDN L+R LEEKG G
Sbjct: 4 ATADLCDAHEDQLALGTLRVLEPVFHLFSRAECFSGEAVTLKVFEDNALVRATLEEKGAG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLV+DGGGSLRCA++GGN A+ NGWAGIV+NGC+RD E+N ++G+ AL + P +
Sbjct: 64 RVLVIDGGGSLRCALVGGNLAQLAEQNGWAGIVLNGCVRDALELNEVNVGIAALTTSPRR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G GE+ V + + G + GEW+YAD DG+L++ A L+
Sbjct: 124 GQKLGTGERDVAVHLPGALVRPGEWVYADIDGVLVASAALN 164
>gi|339326258|ref|YP_004685951.1| ribonuclease E (RNase E) inhibitor protein RraA [Cupriavidus
necator N-1]
gi|338166415|gb|AEI77470.1| ribonuclease E (RNase E) inhibitor protein RraA [Cupriavidus
necator N-1]
Length = 165
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 113/159 (71%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + G LR + P+F+ +G++ F+GP TLKVFEDN L+R LE G GR
Sbjct: 5 TTDLCDAHEDRLADGTLRVMAPVFRAFGKQGAFAGPASTLKVFEDNSLVRAALEAPGQGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGSLRCA++GGN + A+ NGW GIVVNGCIRD E++ CDIG+RALA HP K+
Sbjct: 65 VLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAVHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ +GE V + + G + G W+Y D DG+L+S +L
Sbjct: 125 QKRNVGESDVAVQMPGAVVRPGNWIYVDADGVLVSDEKL 163
>gi|445497957|ref|ZP_21464812.1| ribonuclease activity regulator protein RraA [Janthinobacterium sp.
HH01]
gi|444787952|gb|ELX09500.1| ribonuclease activity regulator protein RraA [Janthinobacterium sp.
HH01]
Length = 165
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CD N L+ G L L P+F+ +G++ FSG + TLKV EDN L+R LE +G G
Sbjct: 4 ATTDLCDDNANLLEDGRLAVLPPVFRHFGKQVQFSGRVTTLKVHEDNALVRSVLETQGGG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLV+DGGGSLR A++GG + AQ+NGWAGI+V+GCIRD DEIN C+IGVRAL +HP K
Sbjct: 64 NVLVIDGGGSLRRALVGGQLGLLAQDNGWAGIIVDGCIRDTDEINSCEIGVRALGAHPQK 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++KKG GE++V + I G + G+W+YAD DGIL+++ L
Sbjct: 124 SSKKGAGERNVRVHIQGVPVQPGDWIYADADGILVAQQML 163
>gi|300691657|ref|YP_003752652.1| ribonuclease E (RNase E) inhibitor protein [Ralstonia solanacearum
PSI07]
gi|299078717|emb|CBJ51376.1| ribonuclease E (RNase E) inhibitor protein [Ralstonia solanacearum
PSI07]
gi|344169963|emb|CCA82335.1| ribonuclease E (RNase E) inhibitor protein [blood disease bacterium
R229]
gi|344171513|emb|CCA84128.1| ribonuclease E (RNase E) inhibitor protein [Ralstonia syzygii R24]
Length = 167
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 115/162 (70%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ ++CDA+ + SG +R L P+F+ +G+R F+GP TLKVFEDN L+R LE+ G
Sbjct: 4 MTPVTDLCDAHEDQLASGAVRVLAPVFRSFGKRAAFAGPATTLKVFEDNGLVRAMLEQPG 63
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A++NGW GI+VNGC+RD E+ C++GV ALA HP
Sbjct: 64 AGRVLVVDGGGSLRCALVGGNLGKLAEDNGWEGILVNGCVRDTRELAECNVGVHALAVHP 123
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KK GE+ + + + G I GEW+Y D DG+L+SR +L
Sbjct: 124 RKSFKKNQGERDIGVQMPGAYIHPGEWVYGDEDGVLVSREKL 165
>gi|430808819|ref|ZP_19435934.1| ribonuclease activity regulator protein RraA [Cupriavidus sp.
HMR-1]
gi|429498794|gb|EKZ97295.1| ribonuclease activity regulator protein RraA [Cupriavidus sp.
HMR-1]
Length = 166
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 112/159 (70%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDAN + G LR L P F +G+R FSGP TLKVFEDN ++R LE G GR
Sbjct: 5 TTDICDANEDRLADGSLRVLTPGFLHFGKRMAFSGPAATLKVFEDNSMVRATLETPGAGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+RCA++GG V A+ NGWAGI+VNGC+RD +E+ CD+G+RAL HP K+
Sbjct: 65 VLVVDGGGSMRCALVGGMLGVLAEKNGWAGIIVNGCVRDSEELKVCDVGIRALGVHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ +G++ V + + G + G W+YAD DG+L+S +L
Sbjct: 125 QKRNVGQEDVTVQMPGAVVRPGNWIYADADGVLVSDEKL 163
>gi|187928318|ref|YP_001898805.1| ribonuclease activity regulator protein RraA [Ralstonia pickettii
12J]
gi|187725208|gb|ACD26373.1| regulator of ribonuclease activity A [Ralstonia pickettii 12J]
Length = 165
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 116/165 (70%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M ++ ++CD + +V G LR L P+F+ +G+R F+GP TLKVFEDN L+R LEE
Sbjct: 1 MTMIPVTDLCDMHEDKLVYGSLRVLTPVFRSFGKRAAFAGPASTLKVFEDNGLVRAALEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G GRVLV+DGGGSLRCA++GGN A+ NGW GI++NGC+RD E+ C++G+ ALA
Sbjct: 61 QGAGRVLVIDGGGSLRCALVGGNLGKLAEENGWEGILLNGCVRDTRELAECNVGIHALAV 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
HP K+ KK G++ V + + G I GEW+YAD DG+L+S+ L
Sbjct: 121 HPRKSIKKNAGQREVGVQMPGAYIQSGEWIYADEDGVLVSQDMLE 165
>gi|241662893|ref|YP_002981253.1| ribonuclease activity regulator protein RraA [Ralstonia pickettii
12D]
gi|404377877|ref|ZP_10982977.1| RraA family protein [Ralstonia sp. 5_2_56FAA]
gi|240864920|gb|ACS62581.1| regulator of ribonuclease activity A [Ralstonia pickettii 12D]
gi|348613103|gb|EGY62700.1| RraA family protein [Ralstonia sp. 5_2_56FAA]
Length = 165
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 115/161 (71%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M ++ ++CD + +V G LR L P+F+ +G+R F+GP TLKVFEDN L+R LEE
Sbjct: 1 MTMIPVTDLCDMHEDKLVYGSLRVLAPVFRSFGKRAAFAGPASTLKVFEDNGLVRAALEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G GRVLV+DGGGSLRCA++GGN A+ NGW GI++NGC+RD E+ C++G+ ALA
Sbjct: 61 QGAGRVLVIDGGGSLRCALVGGNLGKLAEENGWEGILLNGCVRDTRELAECNVGIHALAV 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
HP K+ KK G++ V + + G I GEW+YAD DG+L+S+
Sbjct: 121 HPRKSIKKNAGQREVGVQMPGAYIQSGEWIYADEDGVLVSQ 161
>gi|91784156|ref|YP_559362.1| ribonuclease activity regulator protein RraA [Burkholderia
xenovorans LB400]
gi|123168342|sp|Q13X79.1|RRAAH_BURXL RecName: Full=Putative regulator of ribonuclease activity
gi|91688110|gb|ABE31310.1| Protein of unknown function 1935 [Burkholderia xenovorans LB400]
Length = 164
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 114/160 (71%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++CDA+ + G LR L+P+F ++ R FSG VTLKVFEDN L+R LEEKG G
Sbjct: 4 ATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGS RCA++GGN AQ NGWAGIV+NGC+RD E+N ++G+ ALA+ P +
Sbjct: 64 RVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K G GE+ V + + G + GEW+YAD+DG+L++ A L
Sbjct: 124 GQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAAL 163
>gi|207743295|ref|YP_002259687.1| regulator of ribonuclease activity a protein [Ralstonia
solanacearum IPO1609]
gi|421897030|ref|ZP_16327413.1| regulator of ribonuclease activity a protein [Ralstonia
solanacearum MolK2]
gi|206588195|emb|CAQ18763.1| regulator of ribonuclease activity a protein [Ralstonia
solanacearum MolK2]
gi|206594692|emb|CAQ61619.1| regulator of ribonuclease activity a protein [Ralstonia
solanacearum IPO1609]
Length = 168
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 117/162 (72%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CDA+ + SG +R L P+F+ +G+R F+GP TLKVFEDN L+R LE+ G
Sbjct: 5 MIPVTDLCDAHEDQLASGAVRVLAPVFRSFGKRAAFAGPAATLKVFEDNGLVRAVLEQPG 64
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A++NGW G++VNGC+RD E+ C++GV ALA+HP
Sbjct: 65 GGRVLVVDGGGSLRCALVGGNLGKLAEDNGWEGLLVNGCVRDTRELAECNVGVHALAAHP 124
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KK GE+ + + + G I GEW+Y D DG+L++R +L
Sbjct: 125 RKSFKKNQGERDIGVQMPGAYILPGEWIYGDEDGVLVAREKL 166
>gi|386333665|ref|YP_006029835.1| regulator of ribonuclease activity a protein [Ralstonia
solanacearum Po82]
gi|334196114|gb|AEG69299.1| regulator of ribonuclease activity a protein [Ralstonia
solanacearum Po82]
Length = 164
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 117/162 (72%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CDA+ + SG +R L P+F+ +G+R F+GP TLKVFEDN L+R LE+ G
Sbjct: 1 MIPVTDLCDAHEDQLASGAVRVLAPVFRSFGKRAAFAGPAATLKVFEDNGLVRAVLEQPG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A++NGW G++VNGC+RD E+ C++GV ALA+HP
Sbjct: 61 GGRVLVVDGGGSLRCALVGGNLGKLAEDNGWEGLLVNGCVRDTRELAECNVGVHALAAHP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KK GE+ + + + G I GEW+Y D DG+L++R +L
Sbjct: 121 RKSFKKNQGERDIGVQMPGAYILPGEWIYGDEDGVLVAREKL 162
>gi|168046669|ref|XP_001775795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672802|gb|EDQ59334.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 124/163 (76%), Gaps = 2/163 (1%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQP-IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLE 59
M+L+T +VCDA+ + + SG+L+ L P Q +G++++FSG +VT+KVFEDNVL+R LE
Sbjct: 1 MSLLT-CDVCDAHEEQLTSGDLQVLTPGTLQAFGQKRIFSGRVVTVKVFEDNVLVRSTLE 59
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
E GNGR+LVV+GGGSLR A++GGN A+ NGWAG+V+ GC+RDVDEIN C +GVRALA
Sbjct: 60 EPGNGRILVVEGGGSLRTALVGGNVAKLAETNGWAGLVIFGCVRDVDEINECAVGVRALA 119
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRA 162
P+K+ K G+GEK+V +T G I G++ + D DGIL+S +
Sbjct: 120 PCPVKSKKNGVGEKNVVVTFLGATIRPGDFCWVDNDGILVSTS 162
>gi|340787490|ref|YP_004752955.1| ribonuclease E inhibitor RraA [Collimonas fungivorans Ter331]
gi|340552757|gb|AEK62132.1| Ribonuclease E inhibitor RraA [Collimonas fungivorans Ter331]
Length = 141
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 108/140 (77%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNP 84
+ P+F +G+RQ FSGP TLKV EDNVL+R LE G+G+VLV+DGGGSLRCA++GGN
Sbjct: 1 MPPVFISFGQRQAFSGPARTLKVHEDNVLVRSTLETAGDGQVLVIDGGGSLRCALVGGNL 60
Query: 85 VVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRI 144
V AQ NGWAGI+VNGC+RD E+N CDIGVRALA HP ++ +KG+GE+ V + I G +
Sbjct: 61 GVLAQKNGWAGIIVNGCVRDSAELNACDIGVRALALHPQRSVRKGVGERDVSVAIAGVTV 120
Query: 145 SDGEWLYADTDGILISRAEL 164
+ G W+YAD DG+L++ +L
Sbjct: 121 APGAWIYADADGVLVASQKL 140
>gi|421888367|ref|ZP_16319465.1| ribonuclease E (RNase E) inhibitor protein [Ralstonia solanacearum
K60-1]
gi|378966316|emb|CCF96213.1| ribonuclease E (RNase E) inhibitor protein [Ralstonia solanacearum
K60-1]
Length = 167
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 117/162 (72%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CDA+ + SG +R L P+F+ +G+R F+GP TLKVFEDN L+R LE+ G
Sbjct: 4 MIPVTDLCDAHEDQLASGAVRVLVPVFRSFGKRAAFAGPAATLKVFEDNGLVRAVLEQPG 63
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A++NGW G++VNGC+RD E+ C++GV ALA+HP
Sbjct: 64 GGRVLVVDGGGSLRCALVGGNLGKLAEDNGWEGVLVNGCVRDTRELAECNVGVHALAAHP 123
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KK GE+ + + + G I GEW+Y D DG+L++R +L
Sbjct: 124 RKSVKKNQGERDIGVQMPGAYILPGEWIYGDEDGVLVAREKL 165
>gi|300704277|ref|YP_003745880.1| ribonuclease E inhibitor [Ralstonia solanacearum CFBP2957]
gi|299071941|emb|CBJ43270.1| ribonuclease E (RNase E) inhibitor protein [Ralstonia solanacearum
CFBP2957]
Length = 168
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 116/162 (71%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CDA+ + SG +R L P+F+ +G+R F+GP TLKVFEDN L+R LE+ G
Sbjct: 5 MIPVTDLCDAHEDQLASGAVRVLVPVFRSFGKRAAFAGPAATLKVFEDNGLVRAVLEQPG 64
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGGSLRCA++GGN A++NGW GI+VNGC+RD E+ C++GV ALA+HP
Sbjct: 65 GGRVLVIDGGGSLRCALVGGNLGKLAEDNGWEGILVNGCVRDTRELAECNVGVHALAAHP 124
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KK GE+ + + + G I GEW+Y D DG+L++R L
Sbjct: 125 RKSVKKNQGERDIGVQMPGAYILPGEWIYGDEDGVLVARERL 166
>gi|309782182|ref|ZP_07676912.1| ribonuclease regulator [Ralstonia sp. 5_7_47FAA]
gi|308919248|gb|EFP64915.1| ribonuclease regulator [Ralstonia sp. 5_7_47FAA]
Length = 163
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 115/163 (70%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CD + +V G LR L P+F+ +G+R F+GP TLKVFEDN L+R LEE+G
Sbjct: 1 MIPVTDLCDMHEDKLVYGSLRVLAPVFRSFGKRAAFAGPASTLKVFEDNGLVRAALEEQG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGGSLRCA++GGN A+ NGW GI++NGC+RD E+ C++G+ ALA HP
Sbjct: 61 AGRVLVIDGGGSLRCALVGGNLGKLAEENGWEGILLNGCVRDTRELAECNVGIHALAVHP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ KK G++ V + + G I GEW+YAD DG+L+S+ L
Sbjct: 121 RKSIKKNAGQREVGVQMPGAYIQSGEWIYADEDGVLVSQDMLE 163
>gi|393777044|ref|ZP_10365338.1| ribonuclease e (rnase e) inhibitor protein [Ralstonia sp. PBA]
gi|392716401|gb|EIZ03981.1| ribonuclease e (rnase e) inhibitor protein [Ralstonia sp. PBA]
Length = 168
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 112/159 (70%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDAN + G LR + P + +G+ F+GP TLKVFEDN L+R LE GNGR
Sbjct: 9 TCDLCDANEARLADGSLRVMAPGLRSFGKLAAFAGPAATLKVFEDNALVRATLETPGNGR 68
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVV+GGGSLRCA++GGN A+ NGWAG++VNGC+RD E+ C +G+RA A+ P+++
Sbjct: 69 VLVVEGGGSLRCALVGGNLGKLAEQNGWAGVIVNGCVRDSQELAACAVGIRAWATCPVRS 128
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
NK+G+GE V + + G + G+W+YAD DG+L++ L
Sbjct: 129 NKRGVGESGVQVQMAGVVVRPGDWIYADDDGVLVAAQAL 167
>gi|421746065|ref|ZP_16183886.1| ribonuclease activity regulator protein RraA [Cupriavidus necator
HPC(L)]
gi|409775417|gb|EKN56906.1| ribonuclease activity regulator protein RraA [Cupriavidus necator
HPC(L)]
Length = 170
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 109/160 (68%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CD + + G LR L P +Q +GRR F+GP +TLKVFEDN L+RE LE G G
Sbjct: 4 ATTDLCDDHEARLADGSLRVLTPGWQAFGRRARFAGPAMTLKVFEDNSLVREALESPGQG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVD GGS RCA++GGN Q NGWAGIV+NG +RD E+N C+IG+RAL HP K
Sbjct: 64 RVLVVDAGGSARCALVGGNLGQLGQKNGWAGIVLNGYVRDTVELNDCEIGIRALGVHPRK 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ K+ G++ V + + G + G W+YAD DG+L+S EL
Sbjct: 124 SEKRNSGQRDVALQMPGAVVRPGNWIYADEDGVLVSDVEL 163
>gi|71908709|ref|YP_286296.1| ribonuclease activity regulator protein RraA [Dechloromonas
aromatica RCB]
gi|123626785|sp|Q47BF5.1|RRAAH_DECAR RecName: Full=Putative regulator of ribonuclease activity
gi|71848330|gb|AAZ47826.1| Protein of unknown function 1935 [Dechloromonas aromatica RCB]
Length = 163
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + +R + P+FQ YG R FSG IVTLK+FEDN L+RE E G G+
Sbjct: 5 TPDLCDEFESEL-GKTVRVVTPMFQRYGGRTSFSGQIVTLKIFEDNSLVREVFGEDGKGK 63
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGSLRCA++G + A NGW G+VV GCIRD +ING DIGVRAL +HP K
Sbjct: 64 VLVIDGGGSLRCALVGDQLAILANKNGWEGVVVYGCIRDSGDINGIDIGVRALNTHPQKT 123
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
KKG+G+K+V +T GG + GE+LYAD DG+L+S L+
Sbjct: 124 LKKGVGDKNVAVTFGGVTFNPGEYLYADEDGVLVSGKALT 163
>gi|257095589|ref|YP_003169230.1| ribonuclease activity regulator protein RraA [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257048113|gb|ACV37301.1| regulator of ribonuclease activity A [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 164
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 111/160 (69%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++ D N + G LR + P+FQ YG R FSG IVTLK+FEDN L+RE L G+G+
Sbjct: 5 TPDLLDNNEDKVRDGSLRVVAPMFQSYGGRPEFSGQIVTLKLFEDNSLVRELLAGSGDGK 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLRCA++G + A N W GIVV GCIRD +I DIGVRALA+HP+K+
Sbjct: 65 VLLIDGGGSLRCALVGDQLAILAHRNQWEGIVVYGCIRDSGDIGQIDIGVRALATHPLKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
KKG+GE+ + ++ GG GEW+YAD DG+++S L+
Sbjct: 125 VKKGVGERDLAVSFGGVTFRPGEWIYADGDGVIVSDQPLT 164
>gi|329900751|ref|ZP_08272571.1| Ribonuclease E inhibitor RraA [Oxalobacteraceae bacterium IMCC9480]
gi|327549393|gb|EGF33960.1| Ribonuclease E inhibitor RraA [Oxalobacteraceae bacterium IMCC9480]
Length = 173
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 107/151 (70%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
++ ++CDA+ L+ G L+ L PIFQ YG+ FSGP TLKVFEDN L+R LE+ G G
Sbjct: 6 SSCDLCDAHEDLLRLGSLQVLPPIFQRYGQAPAFSGPAFTLKVFEDNALVRSTLEQPGLG 65
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLV+DGGGSLRC ++GGN A NGW GI+V GC+RDVDE+N C +G+RAL HP +
Sbjct: 66 QVLVIDGGGSLRCGMVGGNLAALADTNGWHGIIVFGCVRDVDELNACTVGIRALGLHPQR 125
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTD 155
+ ++G+G+ + + I G + G+W+YAD D
Sbjct: 126 SARRGLGDTGLNVAIAGVMVRPGDWIYADAD 156
>gi|168045304|ref|XP_001775118.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673569|gb|EDQ60090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 170
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/163 (53%), Positives = 120/163 (73%), Gaps = 2/163 (1%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQP-IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLE 59
M+L+T+ VCD + + + SGEL+ L P +FQ +G++++FSG +VT+KV EDNVL+R +
Sbjct: 1 MSLLTS-NVCDTHEKELASGELQVLTPGVFQSFGQKRIFSGRVVTVKVLEDNVLLRRTVN 59
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
E GNGR+LVVDGGGSLR A++GG A+ GWAG V+ GCIRDVDEIN C IGVRALA
Sbjct: 60 EPGNGRILVVDGGGSLRTALVGGEVAKLAETQGWAGFVIFGCIRDVDEINDCAIGVRALA 119
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRA 162
P+++ K G+GEK+V I I G I G++ + D DGIL+S +
Sbjct: 120 PCPVRSKKNGVGEKNVVINIVGATIRPGDFCWVDNDGILVSTS 162
>gi|114320328|ref|YP_742011.1| ribonuclease activity regulator protein RraA [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311916|sp|Q0A9G6.1|RRAAH_ALHEH RecName: Full=Putative regulator of ribonuclease activity
gi|114226722|gb|ABI56521.1| regulator of ribonuclease activity A [Alkalilimnicola ehrlichii
MLHE-1]
Length = 161
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 110/161 (68%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T ++CD + ELR + P+F+ +G R F GP+ T+K+FEDN +RE L E G
Sbjct: 3 VPTTDLCDD-----FADELRVMNPMFRDFGGRVRFHGPVTTVKLFEDNSAVREALSEPGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCA+LG N Q NGWAG+VV GC+RD E+ D+GV+AL HP+
Sbjct: 58 GRVLVVDGGGSMRCALLGDNLAALGQKNGWAGVVVYGCVRDSAELATIDLGVKALNVHPL 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KKGIGE+ V +T G I G+WLYAD DGI+++R L
Sbjct: 118 KSVKKGIGERDVTVTFAGITIQAGDWLYADEDGIVVARNSL 158
>gi|372486711|ref|YP_005026276.1| RraA family protein [Dechlorosoma suillum PS]
gi|359353264|gb|AEV24435.1| RraA family protein [Dechlorosoma suillum PS]
Length = 163
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CDAN + + LR + P+F+ YG R F G I TLK+FEDN L+RE L + G G
Sbjct: 4 TTPDLCDAN-EAAIGHTLRVVTPMFKAYGGRARFCGRIHTLKIFEDNSLVREALGQPGQG 62
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVDGGGSLRCA++G V AQ NGW GIVV GCIRD EIN D+GVRAL +HP K
Sbjct: 63 KVLVVDGGGSLRCALVGDQLAVLAQKNGWEGIVVYGCIRDSAEINRTDLGVRALDTHPQK 122
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ KKG+G++++ +T GG EW+Y D DG+++S L
Sbjct: 123 SIKKGVGDQNIDVTFGGVTFKPEEWIYVDEDGVIVSATPL 162
>gi|17546073|ref|NP_519475.1| ribonuclease activity regulator protein RraA [Ralstonia
solanacearum GMI1000]
gi|17428369|emb|CAD15056.1| probable regulator of ribonuclease activity a protein [Ralstonia
solanacearum GMI1000]
Length = 168
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 115/163 (70%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CDA+ + SG +R L P+F+ +G R F+GP TLKVFEDN L+R LE+ G
Sbjct: 5 MIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAMLEQPG 64
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A++NGW G++VNGC+RD E+ C++GV ALA+HP
Sbjct: 65 EGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHP 124
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ KK GE+ + + + G I GEW+Y D DG+L+SR L
Sbjct: 125 RKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLVSRERLH 167
>gi|61252297|sp|Q8XZP1.2|RRAAH_RALSO RecName: Full=Putative regulator of ribonuclease activity
Length = 165
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 115/163 (70%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CDA+ + SG +R L P+F+ +G R F+GP TLKVFEDN L+R LE+ G
Sbjct: 2 MIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAMLEQPG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A++NGW G++VNGC+RD E+ C++GV ALA+HP
Sbjct: 62 EGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ KK GE+ + + + G I GEW+Y D DG+L+SR L
Sbjct: 122 RKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLVSRERLH 164
>gi|397687301|ref|YP_006524620.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
DSM 10701]
gi|395808857|gb|AFN78262.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
DSM 10701]
Length = 162
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 115/161 (71%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++PIF +G R F G IVT+K FEDN L++E +E G+G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPIFSNFGGRDSFGGQIVTVKCFEDNSLVKEQVELDGSGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+VVDGGGSLRCA+LG +A NGW G++V GCIRDVD + D+GV+ALASHP+K+
Sbjct: 60 VMVVDGGGSLRCALLGDMLAEKAARNGWQGLIVYGCIRDVDIVAQTDLGVQALASHPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
NK+G+GE ++P+T G GE+LYAD +GI++S EL +
Sbjct: 120 NKRGVGELNIPVTFCGVTFRPGEYLYADNNGIVVSPEELKM 160
>gi|77457999|ref|YP_347504.1| ribonuclease activity regulator protein RraA [Pseudomonas
fluorescens Pf0-1]
gi|123605312|sp|Q3KFE1.1|RRAAH_PSEPF RecName: Full=Putative regulator of ribonuclease activity
gi|77382002|gb|ABA73515.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Pseudomonas fluorescens Pf0-1]
Length = 163
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLRCA+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRCALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K K+G+G+ +VP+T G G+++YAD +G++IS + L +
Sbjct: 116 HPKKTEKRGLGDLNVPVTFAGVTFHPGQYIYADNNGVIISPSPLKM 161
>gi|146307115|ref|YP_001187580.1| ribonuclease activity regulator protein RraA [Pseudomonas mendocina
ymp]
gi|166230396|sp|A4XU32.1|RRAAH_PSEMY RecName: Full=Putative regulator of ribonuclease activity
gi|145575316|gb|ABP84848.1| regulator of ribonuclease activity A [Pseudomonas mendocina ymp]
Length = 162
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F YG R F G +VT+K EDN L++E ++ G GR
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFANYGGRDSFGGQMVTIKCHEDNSLVKEQVDLPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGWAGIVV GCIRDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWAGIVVYGCIRDVDVIAQADLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T GG GE+LYAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFGGVTFKPGEYLYADNNGIIVSPQALSM 160
>gi|398974669|ref|ZP_10685196.1| RraA family protein [Pseudomonas sp. GM25]
gi|398141234|gb|EJM30162.1| RraA family protein [Pseudomonas sp. GM25]
Length = 163
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLDPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMLAEKASKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +VP+T G G+++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVPVTFAGVTFHPGQYIYADNNGVIISPSPLKM 161
>gi|422676043|ref|ZP_16735379.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aceris str. M302273]
gi|330973753|gb|EGH73819.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aceris str. M302273]
Length = 162
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVTLK FEDN +RE +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSKVREQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+++ GCIRDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +VP+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVPVTFGGVTFRPGEYLYADNNGVIISPSTLTM 160
>gi|66045332|ref|YP_235173.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. syringae B728a]
gi|75502393|sp|Q4ZUN7.1|RRAAH_PSEU2 RecName: Full=Putative regulator of ribonuclease activity
gi|63256039|gb|AAY37135.1| Protein of unknown function 1935 [Pseudomonas syringae pv. syringae
B728a]
Length = 162
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVTLK FEDN +RE +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSRVREQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+++ GCIRDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +VP+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVPVTFGGVTFRPGEYLYADNNGVIISPSTLTM 160
>gi|422639379|ref|ZP_16702808.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
Cit 7]
gi|440743885|ref|ZP_20923193.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
BRIP39023]
gi|330951772|gb|EGH52032.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
Cit 7]
gi|440374951|gb|ELQ11666.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
BRIP39023]
Length = 162
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVTLK FEDN +RE +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSKVREQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+++ GCIRDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +VP+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|410093210|ref|ZP_11289704.1| ribonuclease activity regulator protein RraA [Pseudomonas
viridiflava UASWS0038]
gi|409759414|gb|EKN44637.1| ribonuclease activity regulator protein RraA [Pseudomonas
viridiflava UASWS0038]
Length = 162
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G I+TLK FEDN L++E + G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIITLKCFEDNSLVKEQIALDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG QA NGW G+++ GC+RDVD + D+GV+ALASHP K+
Sbjct: 60 VLVVDGGGSLRCAMLGDMVAEQASKNGWEGLLIYGCVRDVDMLAQTDLGVQALASHPKKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +VP+T GG G++LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVPVTFGGVTFKPGDYLYADNNGVIISPSPLTM 160
>gi|378949695|ref|YP_005207183.1| protein RraA [Pseudomonas fluorescens F113]
gi|359759709|gb|AEV61788.1| RraA [Pseudomonas fluorescens F113]
Length = 163
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN +RE +E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVREQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+VV GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVVYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +++G+GE +VP+T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDRRGVGELNVPVTFAGVTFRPGEYVYADNNGVIVSSSPLKM 161
>gi|421501822|ref|ZP_15948779.1| ribonuclease activity regulator protein RraA [Pseudomonas mendocina
DLHK]
gi|400347565|gb|EJO95918.1| ribonuclease activity regulator protein RraA [Pseudomonas mendocina
DLHK]
Length = 162
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F YG R F G +VT+K EDN L++E ++ G GR
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFANYGGRDSFGGQMVTIKCHEDNSLVKEQVDLPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGWAGIVV GC+RDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWAGIVVYGCVRDVDVIAQTDLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T GG GE+LYAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFGGVTFKPGEYLYADNNGIIVSPQALSM 160
>gi|289673271|ref|ZP_06494161.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. syringae FF5]
gi|302185653|ref|ZP_07262326.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. syringae 642]
gi|422617816|ref|ZP_16686517.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. japonica str. M301072]
gi|422632897|ref|ZP_16698055.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. pisi str. 1704B]
gi|422667057|ref|ZP_16726922.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|424067091|ref|ZP_17804550.1| dimethylmenaquinone methyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443644380|ref|ZP_21128230.1| Ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. syringae B64]
gi|330898197|gb|EGH29616.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. japonica str. M301072]
gi|330943075|gb|EGH45512.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. pisi str. 1704B]
gi|330977627|gb|EGH77534.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|408001504|gb|EKG41808.1| dimethylmenaquinone methyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443284397|gb|ELS43402.1| Ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. syringae B64]
Length = 162
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVTLK FEDN +RE +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSKVREQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+++ GC+RDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCVRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +VP+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|398890446|ref|ZP_10644032.1| RraA family protein [Pseudomonas sp. GM55]
gi|398188036|gb|EJM75354.1| RraA family protein [Pseudomonas sp. GM55]
Length = 163
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MIHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NNGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMLAEKAANNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|299067409|emb|CBJ38608.1| ribonuclease E (RNase E) inhibitor protein [Ralstonia solanacearum
CMR15]
Length = 189
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 115/161 (71%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ ++CDA+ + SG +R L P+F+ +G R F+GP TLKVFEDN L+R LE+ G
Sbjct: 27 LPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAALEQPGG 86
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCA++GGN A++NGW G++VNGC+RD E+ C++GV ALA+HP
Sbjct: 87 GRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHPR 146
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KK GE+ + + + G I GEW+Y D DG+L+SR +L
Sbjct: 147 KSVKKNQGERDIGVQMPGAYILPGEWIYGDEDGVLVSREKL 187
>gi|330808427|ref|YP_004352889.1| ribonuclease activity regulator protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|423696218|ref|ZP_17670708.1| putative regulator of ribonuclease activity A [Pseudomonas
fluorescens Q8r1-96]
gi|327376535|gb|AEA67885.1| Putative ribonuclease activity regulator protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388003028|gb|EIK64355.1| putative regulator of ribonuclease activity A [Pseudomonas
fluorescens Q8r1-96]
Length = 163
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+VV GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVVYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +++G+GE +VP+T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDRRGVGELNVPVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|407362897|ref|ZP_11109429.1| ribonuclease activity regulator protein RraA [Pseudomonas mandelii
JR-1]
Length = 163
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NNGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAANNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|162454755|ref|YP_001617122.1| ribonuclease activity regulator protein RraA [Sorangium cellulosum
So ce56]
gi|161165337|emb|CAN96642.1| methyltransferase [Sorangium cellulosum So ce56]
Length = 160
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 113/162 (69%), Gaps = 6/162 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T ++CD +P ++V+ PIF+ YG ++F G I T+KV EDNVL+R+ LEE G
Sbjct: 5 IRTTDLCDEHPDVLVA------DPIFRDYGGARLFHGRITTVKVHEDNVLVRKALEEPGQ 58
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSLRCA+LG N A NGWAG++V+GCIRD + I IGV+ALA+HP
Sbjct: 59 GRVLVVDGGGSLRCALLGDNIAAMAHKNGWAGVIVHGCIRDAEAIGQIPIGVKALATHPR 118
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ KKG G++ + +T G GE +YAD DGI+ ++A+L+
Sbjct: 119 KSAKKGAGDRDIAVTFAGVTWVPGELVYADHDGIVCAQAQLA 160
>gi|358636247|dbj|BAL23544.1| ribonuclease activity regulator protein [Azoarcus sp. KH32C]
Length = 159
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 111/162 (68%), Gaps = 5/162 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ TA++CDAN G++R + P+F+ YG R F GPI TLKVFEDN L+R+ LE G
Sbjct: 2 VIQTADLCDAN-----EGKVRIVSPMFRSYGGRPAFGGPIATLKVFEDNSLVRKALETDG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
+G+VLV+DGGGS+RCA++G NGWAG++V GCIRD I D+GV AL +HP
Sbjct: 57 HGQVLVIDGGGSMRCALVGDQLAQLGVANGWAGVIVYGCIRDSKAIGTMDLGVFALGTHP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+ KKG G+ +PIT GG G+++YAD DG+++S L
Sbjct: 117 LKSIKKGAGDTDIPITFGGVSFVPGQYVYADEDGVVVSEIPL 158
>gi|398994343|ref|ZP_10697246.1| RraA family protein [Pseudomonas sp. GM21]
gi|398132428|gb|EJM21703.1| RraA family protein [Pseudomonas sp. GM21]
Length = 163
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L+++ E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKDQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +VP+T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVPVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|398949717|ref|ZP_10673410.1| RraA family protein [Pseudomonas sp. GM33]
gi|398159008|gb|EJM47333.1| RraA family protein [Pseudomonas sp. GM33]
Length = 163
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MIHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A +NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMLAEKASSNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|398991672|ref|ZP_10694780.1| RraA family protein [Pseudomonas sp. GM24]
gi|399014985|ref|ZP_10717265.1| RraA family protein [Pseudomonas sp. GM16]
gi|398109506|gb|EJL99432.1| RraA family protein [Pseudomonas sp. GM16]
gi|398137844|gb|EJM26882.1| RraA family protein [Pseudomonas sp. GM24]
Length = 163
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK K+GIG+ +VP+T G G ++YAD +G+++S L +
Sbjct: 116 HPMKTEKRGIGDLNVPVTFAGVTFHPGHYIYADNNGVIVSPTPLQM 161
>gi|119897421|ref|YP_932634.1| ribonuclease activity regulator protein RraA [Azoarcus sp. BH72]
gi|119669834|emb|CAL93747.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Azoarcus sp. BH72]
Length = 161
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 109/161 (67%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CDAN G++ + P+F+ +G R F G I TLK+FEDN L+R+ LE GN
Sbjct: 5 IQTADLCDAN-----EGKVAVVAPMFRSFGGRSAFGGAIATLKLFEDNALVRKTLETPGN 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCA++G NGWAGIVV GCIRD ++G DIGV AL +HP+
Sbjct: 60 GRVLVVDGGGSMRCALVGDQLGELGVKNGWAGIVVYGCIRDSKALSGMDIGVFALGTHPL 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K+ GE +P+T GG G +LYAD DG+++S + L
Sbjct: 120 KSIKRNTGEAELPVTFGGVTFVPGHYLYADEDGVIVSASAL 160
>gi|428202868|ref|YP_007081457.1| RraA family protein [Pleurocapsa sp. PCC 7327]
gi|427980300|gb|AFY77900.1| RraA family protein [Pleurocapsa sp. PCC 7327]
Length = 164
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 110/161 (68%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++ DAN LI G++R + P+F+ YG FSG I TLK+FEDN L+RE L E GN
Sbjct: 3 NTTDLLDANEVLIDEGKVRIVAPMFRDYGGNIEFSGSIATLKIFEDNSLVREMLSEPGND 62
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLRCA+LG A NGWAG+V+ G IRD I +GV+AL ++P+K
Sbjct: 63 RVLVVDGGGSLRCALLGDRLGELAVKNGWAGLVIYGAIRDASVIAKLPLGVKALNTYPLK 122
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+ K+G+G+K++P+ G + GEWLYAD DGI++S LS
Sbjct: 123 SLKRGLGDKNIPVRFGEVTFAPGEWLYADLDGIVVSSVPLS 163
>gi|423096425|ref|ZP_17084221.1| regulator of ribonuclease activity A, putative [Pseudomonas
fluorescens Q2-87]
gi|397886454|gb|EJL02937.1| regulator of ribonuclease activity A, putative [Pseudomonas
fluorescens Q2-87]
Length = 163
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+GNG+VLVVDGGGSLR A+LG +A NGW G+VV GCIRDVD I D+GV+ALAS
Sbjct: 56 QGNGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVVYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +++G+GE +VP+T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDRRGVGELNVPVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|404401306|ref|ZP_10992890.1| ribonuclease activity regulator protein RraA [Pseudomonas
fuscovaginae UPB0736]
Length = 163
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L+++ E
Sbjct: 1 MNHYVTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKDQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 NGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +VP+T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVPVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|398876468|ref|ZP_10631625.1| RraA family protein [Pseudomonas sp. GM67]
gi|398204873|gb|EJM91669.1| RraA family protein [Pseudomonas sp. GM67]
Length = 163
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGMVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYIYADNNGVIISPSPLKM 161
>gi|440721743|ref|ZP_20902136.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
BRIP34876]
gi|440724788|ref|ZP_20905064.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
BRIP34881]
gi|440362769|gb|ELP99950.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
BRIP34876]
gi|440369556|gb|ELQ06528.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
BRIP34881]
Length = 162
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVTLK FEDN +RE +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSKVREQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+++ GC+RDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCVRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +V +T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVSVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|383317614|ref|YP_005378456.1| RraA family protein [Frateuria aurantia DSM 6220]
gi|379044718|gb|AFC86774.1| RraA family protein [Frateuria aurantia DSM 6220]
Length = 170
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 111/167 (66%), Gaps = 3/167 (1%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M ++CDA+ + G L+ ++P +QIYG R+ FSGP+ TLKVFEDN L+R LE+
Sbjct: 1 MHDYAICDLCDAHEDRLQQGRLQIVEPEYQIYGGRRHFSGPVFTLKVFEDNSLVRSLLEQ 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGG S RCA+LGGN A +NGWAG+++ G +RD E++ ++G+RAL
Sbjct: 61 PGLGRVLVVDGGASRRCALLGGNLAALAADNGWAGLLICGSVRDRQELDAAEVGIRALGL 120
Query: 121 HPMKANKKGI---GEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP K+ K+G+ G+ + G RI G+WLYAD DGILIS L
Sbjct: 121 HPRKSTKRGLGGQGDVGTALHFSGVRIRCGDWLYADEDGILISDEPL 167
>gi|424922304|ref|ZP_18345665.1| RraA [Pseudomonas fluorescens R124]
gi|404303464|gb|EJZ57426.1| RraA [Pseudomonas fluorescens R124]
Length = 163
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG+G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGDGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK K+G+G+ +VP+T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTEKRGLGDLNVPVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|426410549|ref|YP_007030648.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. UW4]
gi|426268766|gb|AFY20843.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. UW4]
Length = 163
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGMVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|330503547|ref|YP_004380416.1| ribonuclease activity regulator protein RraA [Pseudomonas mendocina
NK-01]
gi|328917833|gb|AEB58664.1| ribonuclease activity regulator protein RraA [Pseudomonas mendocina
NK-01]
Length = 162
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F YG R F G IVT+K EDN L++E ++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFANYGGRDSFGGQIVTIKCHEDNSLVKEQVDLPGQGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T GG GE+LYAD +G+++S L +
Sbjct: 120 DKRGIGDLNVPVTFGGVTFKPGEYLYADNNGVIVSPQALKM 160
>gi|424071719|ref|ZP_17809141.1| dimethylmenaquinone methyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407998527|gb|EKG38937.1| dimethylmenaquinone methyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 162
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVTLK FEDN +RE +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSKVREQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSL CA+LG +A NGW G+++ GC+RDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLCCALLGDMLADKAAKNGWEGMLIYGCVRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +VP+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVPVTFGGVTFRPGEYLYADNNGVVISPSPLTM 160
>gi|431801561|ref|YP_007228464.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
HB3267]
gi|430792326|gb|AGA72521.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
HB3267]
Length = 163
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +VP+T G GE++YAD +G+L+S + L +
Sbjct: 116 HPMKTDKRGIGDLNVPVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 161
>gi|398961241|ref|ZP_10678595.1| RraA family protein [Pseudomonas sp. GM30]
gi|398152757|gb|EJM41269.1| RraA family protein [Pseudomonas sp. GM30]
Length = 163
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGMVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK K+GIG+ +V +T G G+++YAD +G+++S + L +
Sbjct: 116 HPMKTEKRGIGDLNVAVTFAGVTFHPGQYIYADNNGVIVSPSPLQM 161
>gi|398866928|ref|ZP_10622400.1| RraA family protein [Pseudomonas sp. GM78]
gi|398238508|gb|EJN24234.1| RraA family protein [Pseudomonas sp. GM78]
Length = 163
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G G ++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFHPGHYIYADNNGVIVSPSPLKM 161
>gi|291333810|gb|ADD93493.1| ribonuclease activity regulator protein RraA [uncultured marine
bacterium MedDCM-OCT-S04-C13]
Length = 158
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 106/159 (66%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD PQL+ R L+P+ YG R+ FSG IVT+K FEDN +++ + G GR
Sbjct: 4 TPDLCDQYPQLV-----RVLEPMMTSYGGRKQFSGAIVTVKCFEDNSCVKQLVGTSGQGR 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVD GGS R A LG +A NGW+GIV+ GCIRDVDEI DIGV+ALA HPMK
Sbjct: 59 VLVVDSGGSRRRACLGDMLAAEACRNGWSGIVIYGCIRDVDEIAATDIGVQALAVHPMKT 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
KK IGE +P+T GG + G++LYAD +G+L++ L
Sbjct: 119 EKKNIGEIDIPVTFGGVTFTPGDYLYADNNGVLVTSEPL 157
>gi|90415933|ref|ZP_01223866.1| ribonuclease activity regulator protein RraA [gamma proteobacterium
HTCC2207]
gi|90332307|gb|EAS47504.1| ribonuclease activity regulator protein RraA [gamma proteobacterium
HTCC2207]
Length = 158
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 113/162 (69%), Gaps = 5/162 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ +T ++CD P L+ + ++P+F +G R+ FSG IVT+K FEDN +++ ++ +G
Sbjct: 1 MKSTPDLCDQYPDLV-----QVVEPMFSNFGGRECFSGEIVTVKCFEDNSCVKQLVDTQG 55
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRV+VVDGGGS+R A LG +A NGW+G+++ GCIRDVDEI DIGV+AL +HP
Sbjct: 56 QGRVMVVDGGGSMRRACLGDMLAEKASVNGWSGLIIYGCIRDVDEIMATDIGVQALGTHP 115
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
MK +KKGIGE V IT GG + G ++YAD +GI+++ +L
Sbjct: 116 MKTDKKGIGETQVSITFGGVTFNPGNYIYADNNGIVVATQQL 157
>gi|226944419|ref|YP_002799492.1| ribonuclease activity regulator protein RraA [Azotobacter
vinelandii DJ]
gi|259494527|sp|C1DHC2.1|RRAAH_AZOVD RecName: Full=Putative regulator of ribonuclease activity
gi|226719346|gb|ACO78517.1| Regulator of ribonuclease activity A, RraA [Azotobacter vinelandii
DJ]
Length = 162
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDTDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW G+VV GCIRDVD I D+GV+ALA+HPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAARNGWEGLVVYGCIRDVDVIAQTDLGVQALATHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T GG GE+LYAD +GI++S L +
Sbjct: 120 DKRGIGDLNVPVTFGGVTFRPGEYLYADNNGIIVSPQPLKM 160
>gi|422645418|ref|ZP_16708554.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. maculicola str. ES4326]
gi|330958968|gb|EGH59228.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 162
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+ +++ ++P+F +G R F G IVTLK FEDN L+RE +E G G+
Sbjct: 5 TPDLCDAYPE-----QVQVVEPMFSNFGGRDSFGGQIVTLKCFEDNSLVREQVELHGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS+P ++
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAARNGWEGLVIYGCVRDVDMLAQTDLGVQALASYPKRS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G+G+ +P+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGVGQLDLPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|339486573|ref|YP_004701101.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
S16]
gi|338837416|gb|AEJ12221.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
S16]
Length = 163
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAARNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +VP+T G GE++YAD +G+L+S + L +
Sbjct: 116 HPMKTDKRGIGDLNVPVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 161
>gi|222110643|ref|YP_002552907.1| ribonuclease activity regulator protein rraa [Acidovorax ebreus
TPSY]
gi|221730087|gb|ACM32907.1| regulator of ribonuclease activity A [Acidovorax ebreus TPSY]
Length = 168
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
++T ++CDA+ + SG R L P+FQ YG FSGP+ T+K FEDN L++ ++ GN
Sbjct: 9 ISTCDLCDAH-KGDDSGAFRVLPPVFQSYGALPCFSGPVSTVKCFEDNTLVKAAVDSPGN 67
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGG SLR A++GGN A NGWAGIVVNGC+RDV E+N +G+RALA P+
Sbjct: 68 GRVLVVDGGASLRRALVGGNLAASAARNGWAGIVVNGCVRDVAELNAERVGIRALALMPL 127
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G V + + G + G+WLYAD DGI+IS L
Sbjct: 128 PTEKRGEGLSDVAVQVQGVWVRPGDWLYADADGIVISDRAL 168
>gi|398849216|ref|ZP_10605961.1| RraA family protein [Pseudomonas sp. GM80]
gi|398251122|gb|EJN36404.1| RraA family protein [Pseudomonas sp. GM80]
Length = 163
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++ +
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKAQADL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK K+G+G+ +VP+T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTEKRGLGDLNVPVTFAGVTFHPGHYIYADNNGVIISPSPLQM 161
>gi|154251041|ref|YP_001411865.1| ribonuclease activity A regulator [Parvibaculum lavamentivorans
DS-1]
gi|154154991|gb|ABS62208.1| regulator of ribonuclease activity A [Parvibaculum lavamentivorans
DS-1]
Length = 163
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 105/156 (67%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++ DA+P L+ R P+F+ YG R FSGP+ TL DN +RE +E KG G
Sbjct: 8 ATTDLSDAHPALV-----RHAAPVFRDYGGRLAFSGPVATLHAPGDNSKVREAVETKGEG 62
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG G + CA+ GGN A+ NGWAG+VVNGC+RD E+ C IGV+ALA+HP +
Sbjct: 63 RVLVVDGEGLMDCALFGGNLGKLAEENGWAGVVVNGCVRDTAELALCAIGVKALAAHPKR 122
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+ K+G+GEK V + G I+ GEWLYAD DGI++S
Sbjct: 123 SEKRGLGEKDVVLNFAGLTIAPGEWLYADGDGIIVS 158
>gi|389685333|ref|ZP_10176657.1| putative regulator of ribonuclease activity A [Pseudomonas
chlororaphis O6]
gi|425898479|ref|ZP_18875070.1| putative regulator of ribonuclease activity A [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388550986|gb|EIM14255.1| putative regulator of ribonuclease activity A [Pseudomonas
chlororaphis O6]
gi|397892337|gb|EJL08815.1| putative regulator of ribonuclease activity A [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 163
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MNHYLTPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG+G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGHGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|419955037|ref|ZP_14471170.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
TS44]
gi|387968220|gb|EIK52512.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
TS44]
Length = 162
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++PIF +G R F G IVT+K FEDN L++E ++ G+G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPIFSNFGGRDSFGGQIVTVKCFEDNSLVKEQVDTDGSGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GC+RDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKASRNGWEGIVVYGCVRDVDVIAQTDLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G G+++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGDYIYADNNGIIVSPEALKM 160
>gi|429213459|ref|ZP_19204624.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. M1]
gi|428157941|gb|EKX04489.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. M1]
Length = 162
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
>gi|443473037|ref|ZP_21063062.1| Ribonuclease E inhibitor RraA [Pseudomonas pseudoalcaligenes KF707]
gi|442903600|gb|ELS28891.1| Ribonuclease E inhibitor RraA [Pseudomonas pseudoalcaligenes KF707]
Length = 162
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN +++E +++ G G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGQIVTIKCFEDNSVVKEQVDQPGQGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE+LYAD +GI++S L +
Sbjct: 120 DKRGIGDLNVVVTFGGVTFRPGEYLYADNNGIIVSPQALEM 160
>gi|398840906|ref|ZP_10598136.1| RraA family protein [Pseudomonas sp. GM102]
gi|398900239|ref|ZP_10649296.1| RraA family protein [Pseudomonas sp. GM50]
gi|398109540|gb|EJL99465.1| RraA family protein [Pseudomonas sp. GM102]
gi|398181138|gb|EJM68708.1| RraA family protein [Pseudomonas sp. GM50]
Length = 163
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E +
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVAL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A +NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDLLAEKAASNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +++G+GE ++ +T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDRRGVGELNIAVTFAGVTFHPGHYVYADNNGVIISPSPLKM 161
>gi|70729254|ref|YP_258990.1| ribonuclease activity regulator protein RraA [Pseudomonas protegens
Pf-5]
gi|123656901|sp|Q4KFJ3.1|RRAAH_PSEF5 RecName: Full=Putative regulator of ribonuclease activity
gi|68343553|gb|AAY91159.1| putative regulator of ribonuclease activity A [Pseudomonas
protegens Pf-5]
Length = 163
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MNHYLTPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGQGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|398913598|ref|ZP_10656508.1| RraA family protein [Pseudomonas sp. GM49]
gi|398179939|gb|EJM67532.1| RraA family protein [Pseudomonas sp. GM49]
Length = 163
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MIHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRHALLGDMLAEKAAKNGWEGLVIYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K++++G+G+ +VP+T G G ++YAD +G++IS + L +
Sbjct: 116 HPRKSDRRGLGDINVPVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|409397662|ref|ZP_11248525.1| ribonuclease activity regulator protein RraA [Pseudomonas sp.
Chol1]
gi|409117796|gb|EKM94222.1| ribonuclease activity regulator protein RraA [Pseudomonas sp.
Chol1]
Length = 162
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++PIF +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPIFSNFGGRDSFGGQIVTVKCFEDNSLVKDQVDTDGRGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GC+RDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKASRNGWEGIVVYGCVRDVDVIAQTDLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI+IS L +
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIISPEALKM 160
>gi|421181131|ref|ZP_15638649.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa E2]
gi|404544359|gb|EKA53548.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa E2]
Length = 162
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHP+K
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L++
Sbjct: 120 DKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALNM 160
>gi|387895061|ref|YP_006325358.1| regulator of ribonuclease activity A [Pseudomonas fluorescens A506]
gi|387162386|gb|AFJ57585.1| regulator of ribonuclease activity A, putative [Pseudomonas
fluorescens A506]
Length = 163
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVTLK FEDN L++ +
Sbjct: 1 MNHYVTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTLKCFEDNSLVKAQADL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLRCA+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRCALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K +K+G+G+ +VP+T G GE++YAD +G+++S + L +
Sbjct: 116 HPKKTDKRGLGDLNVPVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
>gi|257486269|ref|ZP_05640310.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|289627221|ref|ZP_06460175.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aesculi str. NCPPB 3681]
gi|289650184|ref|ZP_06481527.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aesculi str. 2250]
gi|416015939|ref|ZP_11563405.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. glycinea str. B076]
gi|416026565|ref|ZP_11569969.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. glycinea str. race 4]
gi|422405938|ref|ZP_16482975.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. glycinea str. race 4]
gi|422582778|ref|ZP_16657910.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|422598126|ref|ZP_16672391.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|422681228|ref|ZP_16739498.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|320324969|gb|EFW81041.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. glycinea str. B076]
gi|320329123|gb|EFW85121.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330867617|gb|EGH02326.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330881058|gb|EGH15207.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330988408|gb|EGH86511.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|331010572|gb|EGH90628.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 162
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVT+K FEDN L++E +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTVKCFEDNSLVKEQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A +GW G+++ GCIRDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAARSGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIG+ +V +T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGDLNVLVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|121594744|ref|YP_986640.1| ribonuclease activity regulator protein RraA [Acidovorax sp. JS42]
gi|120606824|gb|ABM42564.1| regulator of ribonuclease activity A [Acidovorax sp. JS42]
Length = 168
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
++T ++CDA+ + SG R L P+FQ YG FSGP+ T+K FEDN L++ ++ GN
Sbjct: 9 ISTCDLCDAH-KGDDSGAFRVLPPVFQSYGALPCFSGPVSTVKCFEDNTLVKAAVDSPGN 67
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGG SLR A++GGN A NGWAGIVVNGC+RDV E++ +G+RALA P+
Sbjct: 68 GRVLVVDGGASLRRALVGGNLAASAARNGWAGIVVNGCVRDVAELSAERVGIRALALMPL 127
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G V + + G + G+WLYAD DGI+IS L
Sbjct: 128 PTEKRGEGLSDVAVQVQGVWVRPGDWLYADADGIVISDRAL 168
>gi|399008130|ref|ZP_10710611.1| RraA family protein [Pseudomonas sp. GM17]
gi|398117914|gb|EJM07657.1| RraA family protein [Pseudomonas sp. GM17]
Length = 163
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MNHYLTPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG+G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGHGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|15596969|ref|NP_250463.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PAO1]
gi|116049722|ref|YP_791473.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218892276|ref|YP_002441143.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa LESB58]
gi|254234866|ref|ZP_04928189.1| hypothetical protein PACG_00741 [Pseudomonas aeruginosa C3719]
gi|254240114|ref|ZP_04933436.1| hypothetical protein PA2G_00754 [Pseudomonas aeruginosa 2192]
gi|296389840|ref|ZP_06879315.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PAb1]
gi|313110463|ref|ZP_07796348.1| putative dimethylmenaquinone methyltransferase [Pseudomonas
aeruginosa 39016]
gi|355644146|ref|ZP_09053651.1| regulator-ribonuclease activity A [Pseudomonas sp. 2_1_26]
gi|386059337|ref|YP_005975859.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa M18]
gi|386065612|ref|YP_005980916.1| ribonuclease activity regulator protein [Pseudomonas aeruginosa
NCGM2.S1]
gi|392984758|ref|YP_006483345.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa DK2]
gi|416854196|ref|ZP_11910744.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa 138244]
gi|416874383|ref|ZP_11918113.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa 152504]
gi|418585551|ref|ZP_13149599.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591305|ref|ZP_13155204.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa MPAO1/P2]
gi|419755364|ref|ZP_14281719.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PADK2_CF510]
gi|420140254|ref|ZP_14648025.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa CIG1]
gi|421154538|ref|ZP_15614043.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa ATCC 14886]
gi|421161293|ref|ZP_15620253.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa ATCC 25324]
gi|421175102|ref|ZP_15632799.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa CI27]
gi|421516411|ref|ZP_15963097.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PAO579]
gi|424940995|ref|ZP_18356758.1| 2-dehydropantoate 2-reductase [Pseudomonas aeruginosa NCMG1179]
gi|451982795|ref|ZP_21931097.1| Ribonuclease E inhibitor RraA [Pseudomonas aeruginosa 18A]
gi|17369015|sp|Q9I2W7.1|RRAAH_PSEAE RecName: Full=Putative regulator of ribonuclease activity
gi|122258831|sp|Q02KR3.1|RRAAH_PSEAB RecName: Full=Putative regulator of ribonuclease activity
gi|226703230|sp|B7VBA7.1|RRAAH_PSEA8 RecName: Full=Putative regulator of ribonuclease activity
gi|223673911|pdb|3C8O|A Chain A, The Crystal Structure Of Rraa From Pao1
gi|223673912|pdb|3C8O|B Chain B, The Crystal Structure Of Rraa From Pao1
gi|9947752|gb|AAG05161.1|AE004603_1 probable methyltransferase [Pseudomonas aeruginosa PAO1]
gi|115584943|gb|ABJ10958.1| putative dimethylmenaquinone methyltransferase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126166797|gb|EAZ52308.1| hypothetical protein PACG_00741 [Pseudomonas aeruginosa C3719]
gi|126193492|gb|EAZ57555.1| hypothetical protein PA2G_00754 [Pseudomonas aeruginosa 2192]
gi|218772502|emb|CAW28284.1| 2-dehydropantoate 2-reductase [Pseudomonas aeruginosa LESB58]
gi|310882850|gb|EFQ41444.1| putative dimethylmenaquinone methyltransferase [Pseudomonas
aeruginosa 39016]
gi|334843392|gb|EGM21982.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa 152504]
gi|334844335|gb|EGM22911.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa 138244]
gi|346057441|dbj|GAA17324.1| 2-dehydropantoate 2-reductase [Pseudomonas aeruginosa NCMG1179]
gi|347305643|gb|AEO75757.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa M18]
gi|348034171|dbj|BAK89531.1| ribonuclease activity regulator protein [Pseudomonas aeruginosa
NCGM2.S1]
gi|354829313|gb|EHF13389.1| regulator-ribonuclease activity A [Pseudomonas sp. 2_1_26]
gi|375044240|gb|EHS36849.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049845|gb|EHS42333.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa MPAO1/P2]
gi|384398061|gb|EIE44469.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PADK2_CF510]
gi|392320263|gb|AFM65643.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa DK2]
gi|403246993|gb|EJY60678.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa CIG1]
gi|404350139|gb|EJZ76476.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PAO579]
gi|404521939|gb|EKA32493.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa ATCC 14886]
gi|404533055|gb|EKA42908.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa CI27]
gi|404540240|gb|EKA49654.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa ATCC 25324]
gi|451759572|emb|CCQ83620.1| Ribonuclease E inhibitor RraA [Pseudomonas aeruginosa 18A]
gi|453047133|gb|EME94848.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PA21_ST175]
Length = 162
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHP+K
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
>gi|399003190|ref|ZP_10705859.1| RraA family protein [Pseudomonas sp. GM18]
gi|398123292|gb|EJM12852.1| RraA family protein [Pseudomonas sp. GM18]
Length = 163
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A +NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRRALLGDMLAEKAASNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +++G+G+ +V +T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDRRGVGDLNVAVTFAGVTFHPGHYVYADNNGVIISPSPLKM 161
>gi|421168590|ref|ZP_15626665.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa ATCC 700888]
gi|404529183|gb|EKA39233.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa ATCC 700888]
Length = 162
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHP+K
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVTVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
>gi|422654318|ref|ZP_16717063.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330967346|gb|EGH67606.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 162
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+ +++ ++P+ +G R F G IVTLK FEDN L++E +E G G+
Sbjct: 5 TPDLCDAYPE-----QVQVVEPMLSNFGGRDSFGGQIVTLKCFEDNSLVKEQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS+P ++
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAAKNGWEGLVIYGCVRDVDMLAQTDLGVQALASYPKRS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G+G+ ++P+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGVGQLNLPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|372266416|ref|ZP_09502464.1| ribonuclease activity regulator protein RraA [Alteromonas sp. S89]
Length = 162
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
++T ++CD PQL+ + ++P F +G R+ F G I T+K FEDN L+R+ + E+G
Sbjct: 6 ISTPDLCDEFPQLV-----QVVEPGFINFGGRETFGGKITTIKCFEDNSLVRDLVAEEGA 60
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVD GGS+R A LG +A NN W GI++ GCIRDVDEI+ +GV+AL SHPM
Sbjct: 61 GRVLVVDAGGSMRRACLGDMLAEKAFNNHWEGILMYGCIRDVDEISQLQLGVQALGSHPM 120
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K +KKGIGE+ V +T GG + GE+LYAD +G+++S L
Sbjct: 121 KTDKKGIGERDVAVTFGGVTFNPGEYLYADNNGVIVSAKPL 161
>gi|152984777|ref|YP_001348888.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa PA7]
gi|452878179|ref|ZP_21955408.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa VRFPA01]
gi|166230394|sp|A6V753.1|RRAAH_PSEA7 RecName: Full=Putative regulator of ribonuclease activity
gi|150959935|gb|ABR81960.1| probable methyltransferase [Pseudomonas aeruginosa PA7]
gi|452185153|gb|EME12171.1| ribonuclease activity regulator protein RraA [Pseudomonas
aeruginosa VRFPA01]
Length = 162
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDAFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I ++GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L++
Sbjct: 120 DKRGIGDLNVVVTFGGVTFRPGEFVYADNNGIIVSPQALNM 160
>gi|229592020|ref|YP_002874139.1| ribonuclease activity regulator protein RraA [Pseudomonas
fluorescens SBW25]
gi|259494531|sp|C3K0T6.1|RRAAH_PSEFS RecName: Full=Putative regulator of ribonuclease activity
gi|229363886|emb|CAY51373.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Pseudomonas fluorescens SBW25]
Length = 163
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVTLK FEDN L++E ++
Sbjct: 1 MNHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGEIVTLKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
>gi|307151888|ref|YP_003887272.1| ribonuclease activity A regulator [Cyanothece sp. PCC 7822]
gi|306982116|gb|ADN13997.1| regulator of ribonuclease activity A [Cyanothece sp. PCC 7822]
Length = 164
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 109/163 (66%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ T ++ DAN L G+LR + P+F+ YG FSG I TLK+FEDN L+RE L E G
Sbjct: 1 MLNTTDLLDANEALFNQGKLRIVAPLFRDYGGNTQFSGVISTLKIFEDNTLVREMLGEPG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GR+LV+DGGGSLRCA+LG A N W+G+V+ G IRD EI +GV+AL ++P
Sbjct: 61 EGRILVIDGGGSLRCALLGDQLGAIAVKNRWSGLVIYGAIRDAAEIAKLPLGVKALNTYP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+K+ K+G+G+K++ + + GEWLYAD DGI++S LS
Sbjct: 121 LKSLKRGLGDKNIAVRFAEVTFTPGEWLYADLDGIIVSSVPLS 163
>gi|407715683|ref|YP_006836963.1| S-adenosylmethionine:2-demethylmenaquinonemethyltransferase
[Cycloclasticus sp. P1]
gi|407256019|gb|AFT66460.1| S-adenosylmethionine:2-demethylmenaquinonemethyltransferase
[Cycloclasticus sp. P1]
Length = 159
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 108/159 (67%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD S L+ P+FQ +G + F+G I T+K+FEDNV +RE L +K NG
Sbjct: 5 TADLCDD-----YSDNLQIATPMFQSFGGHKTFNGTIQTVKIFEDNVFVREMLSQKVNGD 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG NGW+G+++ GCIRD +IN IGVRAL ++P+K+
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEMGHQNGWSGVIIYGCIRDSVDINKMPIGVRALQTNPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
KKG G+K++P+T G + G +LYAD DGI++S+ L
Sbjct: 120 IKKGWGDKNIPVTFAGVTFNPGHYLYADEDGIILSKKAL 158
>gi|407939543|ref|YP_006855184.1| ribonuclease activity regulator protein RraA [Acidovorax sp.
KKS102]
gi|407897337|gb|AFU46546.1| ribonuclease activity regulator protein RraA [Acidovorax sp.
KKS102]
Length = 170
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T + CD + + +SG R L P+FQ YG + VF+GP+ T+K EDN L++ +E G G
Sbjct: 10 STCDFCDVH-KADMSGAFRVLPPVFQSYGGKPVFAGPVTTVKCHEDNSLVKAAVESPGEG 68
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A++GGN A NGWAG+VV+GC+RDV E+N +G+RALA P+
Sbjct: 69 RVLVVDGGGSLRRALVGGNLAAAAARNGWAGLVVDGCVRDVAELNAAAVGIRALALMPLP 128
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
++G G++ V + I G + G+WLYAD DGI++S L+
Sbjct: 129 TERRGEGQRDVAVLIQGVWVRPGDWLYADADGIVVSAQALT 169
>gi|28869494|ref|NP_792113.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213968091|ref|ZP_03396236.1| dimethylmenaquinone methyltransferase family protein [Pseudomonas
syringae pv. tomato T1]
gi|301384933|ref|ZP_07233351.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. tomato Max13]
gi|302061982|ref|ZP_07253523.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. tomato K40]
gi|302135204|ref|ZP_07261194.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|422657617|ref|ZP_16720057.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. lachrymans str. M302278]
gi|37088355|sp|Q883Q6.1|RRAAH_PSESM RecName: Full=Putative regulator of ribonuclease activity
gi|28852736|gb|AAO55808.1| dimethylmenaquinone methyltransferase family protein [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213927071|gb|EEB60621.1| dimethylmenaquinone methyltransferase family protein [Pseudomonas
syringae pv. tomato T1]
gi|331016213|gb|EGH96269.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. lachrymans str. M302278]
Length = 162
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+ +G R F G IVTLK FEDN L++E +E G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMLSNFGGRDSFGGQIVTLKCFEDNSLVKEQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A +GW G+V+ GC+RDVD + D+GV+ALAS+P ++
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAAKHGWEGLVIYGCVRDVDMLAQTDLGVQALASYPKRS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G+G+ +P+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGVGQLDLPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|284992018|ref|YP_003410572.1| regulator of ribonuclease activity A [Geodermatophilus obscurus DSM
43160]
gi|284065263|gb|ADB76201.1| regulator of ribonuclease activity A [Geodermatophilus obscurus DSM
43160]
Length = 164
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 105/156 (67%), Gaps = 7/156 (4%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T +VCDA+P E + +P+F+++G R FSGPI TLKVFEDN L+++ +E G G
Sbjct: 8 ATTDVCDAHP------EAQVCEPVFEVFGGRAAFSGPITTLKVFEDNTLVKQAVEGPGEG 61
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGS RC ++GGN V A NGWAGIVV GCIRD DE+ IGVRALA+HP +
Sbjct: 62 RVLVVDGGGSRRCGLVGGNLAVSAATNGWAGIVVYGCIRDADELAEQPIGVRALAAHPRR 121
Query: 125 ANK-KGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+ + G+ P+ G +GEWL AD DG+++
Sbjct: 122 SERGMHSGQAGRPVVFAGVVFREGEWLCADRDGVVV 157
>gi|422298220|ref|ZP_16385834.1| dimethylmenaquinone methyltransferase [Pseudomonas avellanae BPIC
631]
gi|422588923|ref|ZP_16663588.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. morsprunorum str. M302280]
gi|330875562|gb|EGH09711.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. morsprunorum str. M302280]
gi|407990159|gb|EKG32311.1| dimethylmenaquinone methyltransferase [Pseudomonas avellanae BPIC
631]
Length = 162
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+ +++ ++P+ +G R F G IVTLK FEDN L++E +E G G+
Sbjct: 5 TPDLCDAYPE-----QVQVVEPMLSNFGGRDSFGGQIVTLKCFEDNSLVKEQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS+P ++
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAAKNGWEGLVIYGCVRDVDMLAQTDLGVQALASYPKRS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G+G+ +P+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGVGQLDLPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|429334786|ref|ZP_19215437.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
CSV86]
gi|428760456|gb|EKX82719.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
CSV86]
Length = 162
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E +E G G+
Sbjct: 5 TPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLAQTDVGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T G G+++YAD +G++IS + L +
Sbjct: 120 DKRGIGDLNVAVTFAGVTFHPGQYVYADNNGVIISPSPLKM 160
>gi|398860920|ref|ZP_10616562.1| RraA family protein [Pseudomonas sp. GM79]
gi|398234064|gb|EJN19956.1| RraA family protein [Pseudomonas sp. GM79]
Length = 163
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E +
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVAL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG+G+VLVVDGGGSLR A+LG +A +NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGDGKVLVVDGGGSLRRALLGDLLAEKAASNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +++G+GE ++ +T G G ++YAD +G++IS + L +
Sbjct: 116 HPMKTDRRGVGELNIAVTFAGVTFHPGHYVYADNNGVIISPSPLKM 161
>gi|423692974|ref|ZP_17667494.1| putative regulator of ribonuclease activity A [Pseudomonas
fluorescens SS101]
gi|388001576|gb|EIK62905.1| putative regulator of ribonuclease activity A [Pseudomonas
fluorescens SS101]
Length = 163
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVTLK FEDN L++ +
Sbjct: 1 MNHYVTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTLKCFEDNSLVKAQADL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLRCA+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRCALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K +K+G+G+ +V +T GG GE++YAD +G+++S + L +
Sbjct: 116 HPKKTDKRGLGDLNVAVTFGGVTFRPGEYIYADNNGVIVSPSPLKM 161
>gi|237803655|ref|ZP_04591240.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331025637|gb|EGI05693.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 162
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+ +++ ++P+F +G R F G IVTLK FEDN +++ +E G G+
Sbjct: 5 TPDLCDAYPE-----QVQVVEPMFSNFGGRDSFGGQIVTLKCFEDNSFVKQQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS+P ++
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAAKNGWEGVVIYGCVRDVDMLAQTDLGVQALASYPKRS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +P+T GG GE+LYAD +GI+IS + L++
Sbjct: 120 EKRGEGQLDLPVTFGGVTFHPGEYLYADNNGIIISSSPLTM 160
>gi|148548862|ref|YP_001268964.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
F1]
gi|386013089|ref|YP_005931366.1| Regulator of ribonuclease activity A [Pseudomonas putida BIRD-1]
gi|395444513|ref|YP_006384766.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
ND6]
gi|421522181|ref|ZP_15968826.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
LS46]
gi|166230397|sp|A5W6M0.1|RRAAH_PSEP1 RecName: Full=Putative regulator of ribonuclease activity
gi|148512920|gb|ABQ79780.1| regulator of ribonuclease activity A [Pseudomonas putida F1]
gi|313499795|gb|ADR61161.1| Regulator of ribonuclease activity A [Pseudomonas putida BIRD-1]
gi|388558510|gb|AFK67651.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
ND6]
gi|402754052|gb|EJX14541.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
LS46]
Length = 163
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+L+S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 161
>gi|399520176|ref|ZP_10760952.1| Regulator of ribonuclease activity A [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399111617|emb|CCH37511.1| Regulator of ribonuclease activity A [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 162
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F YG R F G IVT+K EDN L++E ++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFANYGGRDSFGGQIVTIKCHEDNSLVKEQVDLPGQGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GI+V GCIRDVD I ++GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGILVYGCIRDVDVIAQTNLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T GG G++LYAD +G+++S L +
Sbjct: 120 DKRGIGDLNVPVTFGGVTFKPGDYLYADNNGVIVSPQALEM 160
>gi|440736693|ref|ZP_20916282.1| ribonuclease activity regulator protein RraA [Pseudomonas
fluorescens BRIP34879]
gi|447917790|ref|YP_007398358.1| ribonuclease activity regulator protein RraA [Pseudomonas poae
RE*1-1-14]
gi|440382827|gb|ELQ19315.1| ribonuclease activity regulator protein RraA [Pseudomonas
fluorescens BRIP34879]
gi|445201653|gb|AGE26862.1| ribonuclease activity regulator protein RraA [Pseudomonas poae
RE*1-1-14]
Length = 163
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + ++P+F +G R F G IVTLK FEDN L+RE ++
Sbjct: 1 MIHYATPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTLKCFEDNSLVREQVDL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGMVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
>gi|421530339|ref|ZP_15976831.1| ribonuclease activity regulator protein RraA, partial [Pseudomonas
putida S11]
gi|402212224|gb|EJT83629.1| ribonuclease activity regulator protein RraA, partial [Pseudomonas
putida S11]
Length = 154
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 109/157 (69%), Gaps = 5/157 (3%)
Query: 10 CDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVV 69
CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E G G+VLVV
Sbjct: 1 CDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVELDGKGKVLVV 55
Query: 70 DGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKG 129
DGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALASHPMK +K+G
Sbjct: 56 DGGGSLRRALLGDMLAEKAARNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKTDKRG 115
Query: 130 IGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
IG+ +VP+T G GE++YAD +G+L+S + L +
Sbjct: 116 IGDLNVPVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 152
>gi|408480462|ref|ZP_11186681.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. R81]
Length = 163
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MNHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
>gi|107101203|ref|ZP_01365121.1| hypothetical protein PaerPA_01002235 [Pseudomonas aeruginosa PACS2]
Length = 162
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A +GW GIVV GCIRDVD I D+GV+ALASHP+K
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKSGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
>gi|325274543|ref|ZP_08140604.1| ribonuclease activity regulator protein RraA [Pseudomonas sp.
TJI-51]
gi|324100323|gb|EGB98108.1| ribonuclease activity regulator protein RraA [Pseudomonas sp.
TJI-51]
Length = 163
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+++ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAARNGWEGLLIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+L+S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 161
>gi|398883225|ref|ZP_10638183.1| RraA family protein [Pseudomonas sp. GM60]
gi|398197128|gb|EJM84114.1| RraA family protein [Pseudomonas sp. GM60]
Length = 163
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MNHYITPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRHALLGDMLAEKAAKNGWEGLVIYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K++++G+G+ +V +T G GE++YAD +G++IS + L +
Sbjct: 116 HPRKSDRRGLGDLNVVVTFAGVTFRPGEYIYADNNGVIISPSPLKM 161
>gi|170720788|ref|YP_001748476.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
W619]
gi|226703231|sp|B1J596.1|RRAAH_PSEPW RecName: Full=Putative regulator of ribonuclease activity
gi|169758791|gb|ACA72107.1| regulator of ribonuclease activity A [Pseudomonas putida W619]
Length = 163
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLRCA+LG +A NGW G+V+ GC+RDVD + +GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRCALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTSVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLEM 161
>gi|388544878|ref|ZP_10148164.1| ribonuclease activity regulator protein RraA [Pseudomonas sp.
M47T1]
gi|388277187|gb|EIK96763.1| ribonuclease activity regulator protein RraA [Pseudomonas sp.
M47T1]
Length = 162
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++ +E G G+
Sbjct: 5 TPDLCDAYPELV-----KVLEPMFSNFGGRDSFGGEIVTIKCFEDNSKVKAQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A +GW GIV+ GCIRDVD I D+GV+ALASHP++
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAAKSGWEGIVIYGCIRDVDVIAQTDLGVQALASHPLRT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G+G+ +VP++ G GE++YAD +G+++S + L +
Sbjct: 120 EKRGLGDVNVPVSFAGVTFKPGEFIYADNNGVIVSPSALKM 160
>gi|26988809|ref|NP_744234.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
KT2440]
gi|37088372|sp|Q88L51.1|RRAAH_PSEPK RecName: Full=Putative regulator of ribonuclease activity
gi|24983610|gb|AAN67698.1|AE016401_1 s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Pseudomonas putida KT2440]
Length = 163
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+L+S L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPKPLKM 161
>gi|92114182|ref|YP_574110.1| ribonuclease activity regulator protein RraA [Chromohalobacter
salexigens DSM 3043]
gi|91797272|gb|ABE59411.1| Protein of unknown function 1935 [Chromohalobacter salexigens DSM
3043]
Length = 163
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 114/165 (69%), Gaps = 6/165 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
+++ T ++CDA P +++ L+P+F G F GP+ T+K FEDN ++E + E
Sbjct: 3 SMIVTPDICDAYP------DVKVLEPLFLNLGGPDAFYGPVRTVKCFEDNSRVKEAVGEP 56
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G+G VLVVDGGGSLRCA+LG +A +NGWAGIVV GC+RDVD +N +GV+A+ +H
Sbjct: 57 GDGAVLVVDGGGSLRCALLGDMLAAKAADNGWAGIVVYGCVRDVDVLNDTALGVQAIGTH 116
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
P ++ K+G G++ V +T G I+ G+WLYAD +GI+++ EL++
Sbjct: 117 PRRSEKRGEGQRDVTVTFAGVTIAPGQWLYADNNGIVVASEELTL 161
>gi|34497095|ref|NP_901310.1| ribonuclease activity regulator protein RraA [Chromobacterium
violaceum ATCC 12472]
gi|61216011|sp|Q7NXI6.1|RRAAH_CHRVO RecName: Full=Putative regulator of ribonuclease activity
gi|34102952|gb|AAQ59316.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Chromobacterium violaceum ATCC 12472]
Length = 159
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M+L TT ++CDA E++ L P+FQ +G F GPI TLK+FEDN L+R+ L E
Sbjct: 1 MSLATT-DLCDA-----FDAEIQVLDPVFQSFGGHARFHGPIATLKLFEDNSLVRQMLGE 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRVLVVDGGGS RCA+LG A NGWAG+V++GC+RD + +GV+ALA+
Sbjct: 55 PGNGRVLVVDGGGSRRCALLGDQLGELAVKNGWAGLVIDGCVRDSAALGKLPLGVKALAA 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
HP K+ K+ G++ +P+ + G I G+WLYAD DG+++S
Sbjct: 115 HPRKSVKRDSGQRDLPLRVAGCDILPGQWLYADEDGVIVS 154
>gi|395795100|ref|ZP_10474411.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. Ag1]
gi|421141663|ref|ZP_15601644.1| ribonuclease activity regulator protein RraA [Pseudomonas
fluorescens BBc6R8]
gi|395340720|gb|EJF72550.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. Ag1]
gi|404507189|gb|EKA21178.1| ribonuclease activity regulator protein RraA [Pseudomonas
fluorescens BBc6R8]
Length = 163
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 NGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|398936134|ref|ZP_10666870.1| RraA family protein [Pseudomonas sp. GM41(2012)]
gi|398168542|gb|EJM56553.1| RraA family protein [Pseudomonas sp. GM41(2012)]
Length = 163
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MNHYITPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRHALLGDMLAEKAAKNGWEGLVIYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K++++G+G+ +V +T G G ++YAD +G++IS + L +
Sbjct: 116 HPRKSDRRGLGDLNVAVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|46911569|emb|CAG27624.1| putative demethylmenaquinone methyltransferase-like [Populus x
canadensis]
Length = 80
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/80 (96%), Positives = 78/80 (97%)
Query: 87 QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISD 146
QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISD
Sbjct: 1 QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISD 60
Query: 147 GEWLYADTDGILISRAELSV 166
GEWLYAD DGILISR EL+V
Sbjct: 61 GEWLYADADGILISRTELAV 80
>gi|452747901|ref|ZP_21947690.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
NF13]
gi|452008050|gb|EME00294.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
NF13]
Length = 162
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDVDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGWAG+V+ GC+RDVD + ++GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAARNGWAGLVIYGCVRDVDVLAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSM 160
>gi|344939822|ref|ZP_08779110.1| Regulator of ribonuclease activity A [Methylobacter tundripaludum
SV96]
gi|344261014|gb|EGW21285.1| Regulator of ribonuclease activity A [Methylobacter tundripaludum
SV96]
Length = 161
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 3/161 (1%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++CDA+ + + +P+ + YG Q F G I T+KVFEDNVLIR LEEK
Sbjct: 4 TTADLCDAHSE---EDHFQIAEPLLKPYGGHQSFCGQITTVKVFEDNVLIRTVLEEKVEN 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGS RCA+LG + A NGW GIV++GCIRD +N IG+RAL +HP+K
Sbjct: 61 RVLVVDGGGSHRCALLGADLARLAIANGWQGIVIHGCIRDSATLNQLPIGIRALHTHPLK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
++KK G++ + +T G +LYAD DGI++S LS
Sbjct: 121 SHKKDHGDRDLVVTFAGVNFKQNHFLYADADGIIVSETMLS 161
>gi|71737716|ref|YP_274282.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|123636914|sp|Q48JZ3.1|RRAAH_PSE14 RecName: Full=Putative regulator of ribonuclease activity
gi|71558269|gb|AAZ37480.1| protein of unknown function, TIGR01935 [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 164
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 113/163 (69%), Gaps = 7/163 (4%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREF--LEEKGN 63
T ++CDA P LI + ++P+F +G R F G IVT+K FEDN L++E L+ KG
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTVKCFEDNSLVKEQVELDGKGK 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G+VLVVDGGGSLRCA+LG +A +GW G+++ GCIRDVD I D+GV+ALASHP
Sbjct: 60 GKVLVVDGGGSLRCALLGDMLAEKAARSGWEGMLIYGCIRDVDVIAQTDLGVQALASHPK 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K K+GIG+ +V +T GG GE+LYAD +G++IS + L++
Sbjct: 120 KTEKRGIGDLNVLVTFGGVTFRPGEYLYADNNGVIISPSPLTM 162
>gi|398929842|ref|ZP_10664216.1| RraA family protein [Pseudomonas sp. GM48]
gi|398166371|gb|EJM54470.1| RraA family protein [Pseudomonas sp. GM48]
Length = 163
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MIHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRHALLGDMLAEKAAKNGWEGLVIYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K++++G+G+ +V +T G GE++YAD +G++IS L +
Sbjct: 116 HPRKSDRRGLGDLNVVVTFAGVTFRPGEYIYADNNGVIISPVPLKM 161
>gi|395648449|ref|ZP_10436299.1| ribonuclease activity regulator protein RraA [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 163
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MNHYVTPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDMIAEKAARNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
>gi|418294877|ref|ZP_12906755.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
ATCC 14405 = CCUG 16156]
gi|379066238|gb|EHY78981.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
ATCC 14405 = CCUG 16156]
Length = 162
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDVDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAARNGWEGLVIYGCVRDVDVLAQTDLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSM 160
>gi|431927437|ref|YP_007240471.1| RraA family protein [Pseudomonas stutzeri RCH2]
gi|431825724|gb|AGA86841.1| RraA family protein [Pseudomonas stutzeri RCH2]
Length = 162
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDVDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + ++GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAARNGWEGLVIYGCVRDVDVLAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI++S LSV
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSV 160
>gi|421617555|ref|ZP_16058543.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
KOS6]
gi|409780543|gb|EKN60172.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
KOS6]
Length = 162
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L++E ++ G G+
Sbjct: 5 TPDLCDAYPNLV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDVDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + ++GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKASRNGWEGLVIYGCVRDVDVLAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSM 160
>gi|104780897|ref|YP_607395.1| ribonuclease activity regulator protein RraA [Pseudomonas
entomophila L48]
gi|166230395|sp|Q1ICM4.1|RRAAH_PSEE4 RecName: Full=Putative regulator of ribonuclease activity
gi|95109884|emb|CAK14589.1| regulator of ribonuclease activity A [Pseudomonas entomophila L48]
Length = 163
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVDL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLVQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|333900719|ref|YP_004474592.1| Regulator of ribonuclease activity A [Pseudomonas fulva 12-X]
gi|333115984|gb|AEF22498.1| Regulator of ribonuclease activity A [Pseudomonas fulva 12-X]
Length = 161
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 109/160 (68%), Gaps = 5/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T ++CDANP+L+ ++P+F +G R F G IVT+K FEDN L++ E+ G G
Sbjct: 4 STPDLCDANPELV-----SVVEPMFSNFGGRDSFGGEIVTVKCFEDNSLVKSQAEQPGAG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVDGG SLRCA+LG +A +NGW G+V+ GC+RDVD + ++GV+AL SHPMK
Sbjct: 59 KVLVVDGGASLRCALLGDMIAEKAASNGWEGMVIYGCVRDVDVLAQTNLGVQALGSHPMK 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G+G+ +V + GG GE+LYAD +GI++S L
Sbjct: 119 TEKRGLGDLNVVVNFGGVTFRPGEYLYADNNGIIVSAQAL 158
>gi|395499988|ref|ZP_10431567.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. PAMC
25886]
Length = 163
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 NGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTEKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|398849067|ref|ZP_10605841.1| RraA family protein [Pseudomonas sp. GM84]
gi|398245444|gb|EJN30965.1| RraA family protein [Pseudomonas sp. GM84]
Length = 163
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A +GW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKSGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G++IS + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIISPSPLKM 161
>gi|312962479|ref|ZP_07776970.1| Regulator of ribonuclease activity A [Pseudomonas fluorescens WH6]
gi|311283406|gb|EFQ61996.1| Regulator of ribonuclease activity A [Pseudomonas fluorescens WH6]
Length = 163
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MNHYVTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDIIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYIYADNNGVIVSPSPLQM 161
>gi|422604587|ref|ZP_16676603.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. mori str. 301020]
gi|330888245|gb|EGH20906.1| ribonuclease activity regulator protein RraA [Pseudomonas syringae
pv. mori str. 301020]
Length = 162
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVT+K FEDN L++E +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTVKCFEDNSLVKEQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A +GW G+++ CIRDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAARSGWEGMLIYCCIRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIG+ +V +T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGDLNVLVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>gi|224825657|ref|ZP_03698761.1| regulator of ribonuclease activity A [Pseudogulbenkiania
ferrooxidans 2002]
gi|347540785|ref|YP_004848210.1| ribonuclease activity A regulator [Pseudogulbenkiania sp. NH8B]
gi|224601881|gb|EEG08060.1| regulator of ribonuclease activity A [Pseudogulbenkiania
ferrooxidans 2002]
gi|345643963|dbj|BAK77796.1| regulator of ribonuclease activity A [Pseudogulbenkiania sp. NH8B]
Length = 159
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 110/164 (67%), Gaps = 6/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M +TT ++CD + ++R L+P+FQ +G F G I TLKVFEDN L+RE L E
Sbjct: 1 MTFLTT-DLCDEH-----ENDVRVLEPMFQRFGACPRFQGQIETLKVFEDNTLVREVLSE 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRVLVVDGGGS RCA++G A NGWAGIVV GCIRD +N +GVRAL +
Sbjct: 55 PGNGRVLVVDGGGSRRCALVGDQIGELAVKNGWAGIVVYGCIRDSVALNALPLGVRALDT 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP K+ K+G G++ + +T GG +S G+WLYAD DG++++ L
Sbjct: 115 HPRKSVKRGEGQRGLAVTFGGVSLSPGDWLYADEDGVIVADRAL 158
>gi|167032605|ref|YP_001667836.1| ribonuclease activity regulator protein RraA [Pseudomonas putida
GB-1]
gi|189044040|sp|B0KG79.1|RRAAH_PSEPG RecName: Full=Putative regulator of ribonuclease activity
gi|166859093|gb|ABY97500.1| regulator of ribonuclease activity A [Pseudomonas putida GB-1]
Length = 163
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V + G GE++YAD +G+L+S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVAFAGVTFRPGEYVYADNNGVLVSPSPLEM 161
>gi|448746644|ref|ZP_21728309.1| Ribonuclease E inhibitor RraA [Halomonas titanicae BH1]
gi|445565572|gb|ELY21681.1| Ribonuclease E inhibitor RraA [Halomonas titanicae BH1]
Length = 165
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 109/163 (66%), Gaps = 6/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T ++CDA+P++ V L P+F +G + F GPI T+K FEDN ++++ + E GN
Sbjct: 8 IVTPDLCDAHPEVAV------LDPLFANFGGLEAFYGPIRTIKCFEDNSMVKQAVAEPGN 61
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVD GGS RCA+LG QA NGWAGIV+ GC+RDVD + IGV+AL SHP
Sbjct: 62 GAVLVVDAGGSHRCAMLGDMLAEQAVANGWAGIVMYGCVRDVDILAALPIGVQALGSHPR 121
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ K+G G++ + +T G + G+WLYAD +GI+++ EL +
Sbjct: 122 KSEKRGEGQRDIDVTFAGVTLQPGQWLYADNNGIIVAEQELPL 164
>gi|89094366|ref|ZP_01167307.1| hypothetical protein MED92_09636 [Neptuniibacter caesariensis]
gi|89081425|gb|EAR60656.1| hypothetical protein MED92_09636 [Oceanospirillum sp. MED92]
Length = 162
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 109/159 (68%), Gaps = 5/159 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
E+CD P+L+ + ++P+F +G ++ F G IVTLK FEDN L+RE + G G+VL
Sbjct: 7 ELCDQFPELV-----QVVEPMFGNFGGKERFGGEIVTLKAFEDNSLVREQVALPGEGKVL 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
VVDGGGS+R A+LG +A NGW GI++ GCIRDV+ I+ DIGV+AL HPMK K
Sbjct: 62 VVDGGGSMRKAMLGDMLAEKATKNGWEGIIIYGCIRDVNAISDLDIGVQALGCHPMKTEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KG+GE +V IT GG G+++YAD +G+LIS +L V
Sbjct: 122 KGLGELNVDITFGGVTFKPGQYVYADNNGVLISPEKLEV 160
>gi|442317438|ref|YP_007357459.1| ribonuclease activity regulator protein RraA [Myxococcus stipitatus
DSM 14675]
gi|441485080|gb|AGC41775.1| ribonuclease activity regulator protein RraA [Myxococcus stipitatus
DSM 14675]
Length = 161
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 104/160 (65%), Gaps = 3/160 (1%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDAN S + +P F YG R FSG I T+ EDN L+R+ LEE GNGR
Sbjct: 5 TADLCDANAG---SAHFQIAEPGFLHYGGRTTFSGAISTVLAPEDNSLVRKALEEPGNGR 61
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA++G + AQ NGWAG+VVNGCIRD +E+ IGV+AL +HP+++
Sbjct: 62 VLVVDGGGSRRCALVGDQLALLAQKNGWAGVVVNGCIRDSEEVGRTAIGVQALGTHPLRS 121
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G G+ V + G G +LYAD DGI+ S L+
Sbjct: 122 GKRGAGQHDVEVRFAGVTFRPGHFLYADADGIVTSETALT 161
>gi|398871193|ref|ZP_10626510.1| RraA family protein [Pseudomonas sp. GM74]
gi|398206788|gb|EJM93548.1| RraA family protein [Pseudomonas sp. GM74]
Length = 163
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MIHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG+G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGDGKVLVVDGGGSLRHALLGDMLAEKAAKNGWEGLVIYGCIRDVDIIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K++++G+G+ +V +T G G ++YAD +G++IS + L +
Sbjct: 116 HPRKSDRRGLGDLNVAVTFAGVTFHPGHYIYADNNGVIISPSPLKM 161
>gi|338998512|ref|ZP_08637185.1| ribonuclease activity regulator protein RraA [Halomonas sp. TD01]
gi|338764586|gb|EGP19545.1| ribonuclease activity regulator protein RraA [Halomonas sp. TD01]
Length = 164
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 6/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T ++CDA P + V L+P+F YG F GPI T+K FEDN ++++ + E G+
Sbjct: 7 VVTPDLCDAYPDVTV------LEPMFANYGGVDSFYGPIRTVKCFEDNSMVKQAVAEPGD 60
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVD GGS RCA+LG QA NGWAG+V+ GC+RDVD + +G++AL +HP
Sbjct: 61 GAVLVVDAGGSHRCAMLGDMLAEQAAENGWAGVVMYGCVRDVDILVTLPLGIQALGNHPR 120
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ K+G G++ +PIT G IS G+WLYAD +GI+I+ L +
Sbjct: 121 KSEKRGEGQRDIPITFAGATISAGQWLYADNNGIIIAEKPLEL 163
>gi|409425457|ref|ZP_11260048.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. HYS]
Length = 162
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 110/161 (68%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ L+P+F +G R F G IVT+K FEDN ++E +E G G+
Sbjct: 5 TPDLCDAYPELV-----HVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQVELDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A N W G+V+ GC+RDVD + D+GV+ALASHP+K+
Sbjct: 60 VLVVDGGGSLRHALLGDMLAEKAAKNHWQGLVIYGCVRDVDVLAQTDVGVQALASHPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++GIGE +VP+T G GE++YAD +G+++S + L +
Sbjct: 120 VRRGIGELNVPVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 160
>gi|307545026|ref|YP_003897505.1| ribonuclease activity A regulator [Halomonas elongata DSM 2581]
gi|307217050|emb|CBV42320.1| K02553 regulator of ribonuclease activity A [Halomonas elongata DSM
2581]
Length = 161
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 113/166 (68%), Gaps = 6/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + T ++CD P ++ L+P+ +G + F GP+ T+K FEDN L+++ ++E
Sbjct: 1 MTNIPTPDICDDYP------DVEILEPLLVNFGGLEAFHGPVRTVKCFEDNSLVKQAVDE 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G+G VLVVD GGS RCA+LG +A NGWAG+++ GC+RDVDE+ ++G++ALA+
Sbjct: 55 PGDGAVLVVDAGGSTRCAMLGDMLAEKAAGNGWAGVIMYGCVRDVDELAETELGIQALAA 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP ++ K+G G++ +P+T G IS G+WLYAD +G+LI+ +L +
Sbjct: 115 HPRRSEKRGEGQRDIPVTFAGVTISPGQWLYADNNGVLIAERQLPL 160
>gi|383759089|ref|YP_005438074.1| regulator of ribonuclease activity A RraA [Rubrivivax gelatinosus
IL144]
gi|381379758|dbj|BAL96575.1| regulator of ribonuclease activity A RraA [Rubrivivax gelatinosus
IL144]
Length = 164
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 108/163 (66%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M +T ++CDA+ GE R L P+F YG R F+GP T+K EDN L++ L+E
Sbjct: 1 MDDFSTCDLCDAHKDAGDGGEFRVLPPVFTSYGGRVRFAGPASTVKCHEDNSLVKAALDE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGGS R A++GGN A NGWAG+VV+G +RD+ E+ CD+G+RALA+
Sbjct: 61 PGRGRVLVVDGGGSRRRALVGGNLAAAAARNGWAGLVVDGAVRDLAELAACDVGIRALAA 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
PM K+ G++ +P+ + G R++ GEW+ AD DGI++ A
Sbjct: 121 MPMPTVKRNEGQRDLPVQVQGVRVAPGEWVVADEDGIVVMPAR 163
>gi|399910731|ref|ZP_10779045.1| ribonuclease activity regulator protein RraA [Halomonas sp. KM-1]
Length = 162
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + T ++CDA+P E++ L PIF YG R+ F GPI T+K FEDN LI++ + E
Sbjct: 1 MTAIITPDICDAHP------EVQVLDPIFVSYGGREAFCGPIRTVKCFEDNTLIKQAVSE 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G VLVVD GGS RCA+LG A +NGW+G+V+ GC+RDVD + D+GV AL +
Sbjct: 55 PGEGAVLVVDAGGSHRCAMLGDMLAELAVDNGWSGVVMYGCVRDVDVLAETDLGVHALGA 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP ++ K+G G + + +T G + G+WLYAD +GI+++ L +
Sbjct: 115 HPRRSEKRGEGSRDITVTFAGVTLRPGQWLYADNNGIVVAEERLPL 160
>gi|392421176|ref|YP_006457780.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
CCUG 29243]
gi|390983364|gb|AFM33357.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
CCUG 29243]
Length = 162
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDVDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + ++GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAARNGWEGLVIYGCVRDVDVLAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSM 160
>gi|83644944|ref|YP_433379.1| ribonuclease activity regulator protein RraA [Hahella chejuensis
KCTC 2396]
gi|123533787|sp|Q2SK70.1|RRAAH_HAHCH RecName: Full=Putative regulator of ribonuclease activity
gi|83632987|gb|ABC28954.1| Demethylmenaquinone methyltransferase [Hahella chejuensis KCTC
2396]
Length = 164
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA PQL+ ++P+FQ +G + F G IVT+K FEDN ++++ +++ G+G+
Sbjct: 5 TPDLCDAYPQLV-----SVVEPMFQNFGAKSSFGGEIVTVKCFEDNSVVKQQVDQPGHGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+VVDGGGS R A+LG +A NGW GI++ GCIRDVD I D+GV+AL +HPMK
Sbjct: 60 VMVVDGGGSKRAALLGDMLAEKAAANGWEGIIIYGCIRDVDVIRQTDLGVQALGTHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ + IT GG G ++YAD +G+++S LS+
Sbjct: 120 DKRGIGDLNADITFGGVTFKPGHYVYADNNGVIVSPEPLSM 160
>gi|359396779|ref|ZP_09189830.1| Regulator of ribonuclease activity A [Halomonas boliviensis LC1]
gi|357969457|gb|EHJ91905.1| Regulator of ribonuclease activity A [Halomonas boliviensis LC1]
Length = 165
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 109/163 (66%), Gaps = 6/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T ++CDA+P++ V L P+F +G + F GPI T+K FEDN ++++ + E GN
Sbjct: 8 IVTPDLCDAHPEVAV------LDPLFANFGGLEAFYGPIRTIKCFEDNSMVKQAVTEPGN 61
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVD GGS RCA+LG QA NGWAG+V+ GC+RDVD + IGV+AL SHP
Sbjct: 62 GAVLVVDAGGSHRCAMLGDMLAEQAVANGWAGVVMYGCVRDVDILAALPIGVQALGSHPR 121
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ K+G G++ + +T G + G+WLYAD +GI+++ EL +
Sbjct: 122 KSEKRGEGQRDIDVTFAGVTLQPGQWLYADNNGIIVADHELPL 164
>gi|94502020|ref|ZP_01308526.1| ribonuclease activity regulator protein RraA [Oceanobacter sp.
RED65]
gi|94425827|gb|EAT10829.1| ribonuclease activity regulator protein RraA [Oceanobacter sp.
RED65]
Length = 162
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 111/166 (66%), Gaps = 6/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CD P E+ L+P+F YG R+ F G +VT+K EDN L++E +++
Sbjct: 1 MTNYVTPDLCDEYP------EVEVLEPMFNNYGGRESFGGEVVTIKCHEDNSLVKENVDK 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+V+VVDGGGSLR A+LG +A NGW GI++NGCIRDVD I ++GV+ALA+
Sbjct: 55 PGQGKVMVVDGGGSLRNAMLGDMLAEKAAKNGWEGIIINGCIRDVDVIMETNLGVQALAT 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P K KKGIGE ++P+ G I G+++YAD +GI++S +L +
Sbjct: 115 NPRKTEKKGIGEMNIPVKFAGVHIKPGQFIYADNNGIIVSDKKLEM 160
>gi|352100028|ref|ZP_08957955.1| ribonuclease activity regulator protein RraA [Halomonas sp. HAL1]
gi|350601376|gb|EHA17422.1| ribonuclease activity regulator protein RraA [Halomonas sp. HAL1]
Length = 164
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 109/163 (66%), Gaps = 6/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T ++CDA+P++ V L P+F +G + F GPI T+K FEDN ++++ + E GN
Sbjct: 7 IVTPDLCDAHPEVAV------LDPLFVNFGGLEAFYGPISTIKCFEDNSMVKQAVAEPGN 60
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVD GGS RCA+LG QA NGWAG+V+ GC+RDVD + IGV+AL SHP
Sbjct: 61 GAVLVVDAGGSHRCAMLGDMLAEQAVANGWAGVVMYGCVRDVDILATLPIGVQALGSHPR 120
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ K+G G++ + +T G + G+WLYAD +GI+++ EL +
Sbjct: 121 KSEKRGEGQRDIDVTFAGVTLQPGQWLYADNNGIIVAAQELPL 163
>gi|146282400|ref|YP_001172553.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
A1501]
gi|339494017|ref|YP_004714310.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
ATCC 17588 = LMG 11199]
gi|386020683|ref|YP_005938707.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
DSM 4166]
gi|166230398|sp|A4VL60.1|RRAAH_PSEU5 RecName: Full=Putative regulator of ribonuclease activity
gi|145570605|gb|ABP79711.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Pseudomonas stutzeri A1501]
gi|327480655|gb|AEA83965.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
DSM 4166]
gi|338801389|gb|AEJ05221.1| ribonuclease activity regulator protein RraA [Pseudomonas stutzeri
ATCC 17588 = LMG 11199]
Length = 162
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDVDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+VVDGGGSLR A+LG +A NGW G+++ GC+RDVD + ++GV+ALASHPMK
Sbjct: 60 VMVVDGGGSLRRALLGDMLAEKAARNGWEGLIIYGCVRDVDVLAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSM 160
>gi|395007048|ref|ZP_10390827.1| RraA family protein [Acidovorax sp. CF316]
gi|394314935|gb|EJE51780.1| RraA family protein [Acidovorax sp. CF316]
Length = 170
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T + CDA+ + SG R L P+FQ G FSGP+ T+K FEDN L++ ++ GNG
Sbjct: 10 STCDFCDAH-KGDDSGAFRVLPPVFQDLGGVPAFSGPVSTVKCFEDNTLVKAAVDSPGNG 68
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A++GGN A NGWAG+VV+GC+RD+ E+ +G+RALA P+
Sbjct: 69 RVLVVDGGGSLRKALVGGNLAAAAARNGWAGVVVDGCVRDIAELRAAAVGIRALALMPLP 128
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ G++ V + I G + G+WLYAD DGI++S LS
Sbjct: 129 TEKRNEGQRDVAVQIQGVWVRPGDWLYADADGIVVSAGPLS 169
>gi|302835499|ref|XP_002949311.1| hypothetical protein VOLCADRAFT_120739 [Volvox carteri f.
nagariensis]
gi|300265613|gb|EFJ49804.1| hypothetical protein VOLCADRAFT_120739 [Volvox carteri f.
nagariensis]
Length = 211
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 103/139 (74%)
Query: 28 IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQ 87
+F+ +G + FSG T+K +E+N L+R+ LEE GNGRVLVVDGGGSLRCA+LG
Sbjct: 73 LFRDFGGKLRFSGQASTVKCYENNPLVRKALEEPGNGRVLVVDGGGSLRCALLGDMLAEN 132
Query: 88 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDG 147
NGW+GI+VNGCIRD +I +GV+AL +HP+K++K+ G++ VP++ GG +S G
Sbjct: 133 GVKNGWSGILVNGCIRDSADIAKMPLGVKALGTHPLKSSKRDPGQRDVPVSFGGVTVSPG 192
Query: 148 EWLYADTDGILISRAELSV 166
+W+YAD DGIL+S+ EL++
Sbjct: 193 DWVYADGDGILVSKEELTL 211
>gi|388468915|ref|ZP_10143125.1| putative regulator of ribonuclease activity A [Pseudomonas
synxantha BG33R]
gi|388012495|gb|EIK73682.1| putative regulator of ribonuclease activity A [Pseudomonas
synxantha BG33R]
Length = 163
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MNHYVTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+V+VVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 PGAGKVMVVDGGGSLRRALLGDLIADKAAKNGWEGLVIYGCVRDVDVLAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+G+G+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGLGDLNVVVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
>gi|335424154|ref|ZP_08553169.1| ribonuclease activity regulator protein RraA [Salinisphaera
shabanensis E1L3A]
gi|334890206|gb|EGM28479.1| ribonuclease activity regulator protein RraA [Salinisphaera
shabanensis E1L3A]
Length = 166
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 107/166 (64%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + ++CD S +L+ +PIF +G F+GPI T+K FEDN L+R LEE
Sbjct: 5 LRMTPVTDLCDE-----FSDKLQIAEPIFTDFGGTLDFAGPISTVKCFEDNSLVRAALEE 59
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGG S RCA+LG N A +N WAGI+V GCIRD EI+ + V+AL +
Sbjct: 60 PGEGRVLVVDGGASDRCALLGDNLAQLAIDNEWAGILVYGCIRDSAEISQMGVTVKALNA 119
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K+NKK GE+ VP+ G G+W+YAD DG+++S +ELS+
Sbjct: 120 HPKKSNKKNQGERDVPVRFAGVSFMPGDWVYADLDGVVVSASELSL 165
>gi|379736755|ref|YP_005330261.1| Regulator of ribonuclease activity A [Blastococcus saxobsidens DD2]
gi|378784562|emb|CCG04231.1| Regulator of ribonuclease activity A [Blastococcus saxobsidens DD2]
Length = 162
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M++ T ++CDA+ E + +P+F+ +G R F+GPI TLKVFEDN L+RE +
Sbjct: 1 MSIPATTDLCDAD------AEAQVCEPVFRAFGGRPAFAGPITTLKVFEDNTLVREAVGR 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGGS RC++ GGN V A NGWAG+VV+GC+RDV E+ IGVRALAS
Sbjct: 55 PGAGRVLVVDGGGSRRCSLFGGNLAVAAATNGWAGVVVHGCVRDVAELAAHPIGVRALAS 114
Query: 121 HPMKANKKGI--GEKHVPITIGGTRISDGEWLYADTDGILI 159
P ++++ G+ G+ +P+ G +G WL AD DGI++
Sbjct: 115 FP-RSSEPGLHSGQAGLPVRFAGVLFREGAWLCADEDGIVV 154
>gi|402699175|ref|ZP_10847154.1| ribonuclease activity regulator protein RraA [Pseudomonas fragi
A22]
Length = 163
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+ ++ L+P+F +G R F G IVT+K FEDN ++E E
Sbjct: 1 MNHYITPDLCDAYPE-----SVQVLEPMFSNFGGRDSFGGEIVTIKCFEDNSRVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD + D+GV+ALAS
Sbjct: 56 NGKGKVLVVDGGGSLRHALLGDMIAEKASKNGWEGLVIYGCIRDVDVLAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+K+ ++G+G+ +VP+T G GE++YAD +G++IS L +
Sbjct: 116 HPLKSVRRGLGDVNVPVTFAGVTFRPGEFIYADNNGVIISPVALKM 161
>gi|17369593|sp|Q9S4U0.1|RRAAH_PSEFL RecName: Full=Putative regulator of ribonuclease activity
gi|5668608|gb|AAD45979.1| MenG [Pseudomonas fluorescens]
Length = 163
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MIHYVTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALA
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCVRDVDVLAQTDLGVQALAP 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFASVTFRPGEYVYADNNGVIVSPSPLKM 161
>gi|388570209|ref|ZP_10156569.1| ribonuclease activity regulator protein RraA [Hydrogenophaga sp.
PBC]
gi|388262591|gb|EIK88221.1| ribonuclease activity regulator protein RraA [Hydrogenophaga sp.
PBC]
Length = 165
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CDA+ + SG R L P+++ +G + F GP+ T+K FEDN ++ +E G G
Sbjct: 7 ATCDLCDAH-KADDSGAFRVLPPVWRHFGAHRSFHGPVSTVKCFEDNTAVKAAVESAGEG 65
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A+LGGN A NGWAG+V++GC+RDV E+ C++G+ ALA P+
Sbjct: 66 RVLVVDGGGSLRRALLGGNLGAAAARNGWAGVVIDGCVRDVAELAACEVGICALAPVPLP 125
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++G G++ V + + G + G+WLYAD DGI++S L
Sbjct: 126 TERRGEGQRDVAVRVQGVWVRPGDWLYADEDGIVVSAVRL 165
>gi|375105856|ref|ZP_09752117.1| RraA family protein [Burkholderiales bacterium JOSHI_001]
gi|374666587|gb|EHR71372.1| RraA family protein [Burkholderiales bacterium JOSHI_001]
Length = 163
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M+ +T E+CD + + G R L P+F+ +G + F GP+VT+K EDN ++ +E
Sbjct: 1 MSEFSTCEMCDGHKSRM-DGSFRVLPPVFRDFGAKARFCGPVVTVKCPEDNTQVKALVES 59
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGG SLR A+LG +A NGWAGIV++GC+RDV + DIG+RALA+
Sbjct: 60 PGQGRVLVVDGGASLRRALLGDMLAGKAVANGWAGIVIDGCVRDVAILATLDIGIRALAA 119
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
P+ ++KGIGE +P+ I G + G+WLYAD DG++++
Sbjct: 120 MPLPTDRKGIGEHDIPVQIQGVWVRPGDWLYADADGMVVT 159
>gi|56477973|ref|YP_159562.1| ribonuclease activity regulator protein RraA [Aromatoleum
aromaticum EbN1]
gi|81598678|sp|Q5P203.1|RRAAH_AROAE RecName: Full=Putative regulator of ribonuclease activity
gi|56314016|emb|CAI08661.1| Demethylmenaquinone methyltransferase [Aromatoleum aromaticum EbN1]
Length = 159
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 104/159 (65%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDAN ++ + P+F+ YG R F G I TLKVFEDN L+R LE G G+
Sbjct: 5 TADLCDANES-----RVKIVSPMFRSYGGRGAFCGRITTLKVFEDNSLVRTALEGPGQGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+RCA++G + N WAG++V GCIRD I ++GV AL SHP+K+
Sbjct: 60 VLVVDGGGSMRCALVGDQLALLGVKNQWAGVIVYGCIRDSKAIGTMELGVFALGSHPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
KKG G+ + +T GG + G ++YAD DG+++S + L
Sbjct: 120 IKKGAGDVDIAVTFGGVTFTPGHFIYADEDGVVVSESSL 158
>gi|405356348|ref|ZP_11025368.1| Ribonuclease E inhibitor RraA [Chondromyces apiculatus DSM 436]
gi|397090944|gb|EJJ21785.1| Ribonuclease E inhibitor RraA [Myxococcus sp. (contaminant ex DSM
436)]
Length = 165
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 108/160 (67%), Gaps = 3/160 (1%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDA+ + + + +P F YG + F+GPI T++ EDN L+R+ LEE G GR
Sbjct: 9 TADLCDAHAG---TAQFQIAEPGFHDYGGVRTFAGPISTVRAPEDNSLVRKALEEPGKGR 65
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA++G + AQ NGWAG+VVNGCIRD +++ IGV+AL +HP+K+
Sbjct: 66 VLVVDGGGSRRCALVGDQLALLAQQNGWAGVVVNGCIRDAEDVGRMPIGVKALGTHPLKS 125
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ G++ V + G G ++YAD DGI++S + LS
Sbjct: 126 LKRNEGQRDVEVRFAGVVFRPGHYVYADLDGIIVSESPLS 165
>gi|304313045|ref|YP_003812643.1| Demethylmenaquinone methyltransferase [gamma proteobacterium HdN1]
gi|301798778|emb|CBL47011.1| Demethylmenaquinone methyltransferase [gamma proteobacterium HdN1]
Length = 159
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 112/159 (70%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+P+ ++R ++ +F YG VFSGPIVT+K EDN +++E + + G GR
Sbjct: 5 TCDLCDAHPE-----KVRIVEALFTNYGGNLVFSGPIVTVKCHEDNSVVKEQVGKPGAGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA+LG +A NGW G+++ G IRDVDEI +GV+ALA+ P+K+
Sbjct: 60 VLVVDGGGSKRCALLGDMLAAKAAENGWVGLIIYGAIRDVDEIRKTPLGVQALATIPIKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
N++G G+ ++PI+ GG +GE++YAD +GI++S L
Sbjct: 120 NRQGRGDLNIPISFGGVTFQEGEYVYADNNGIIVSAEPL 158
>gi|383458701|ref|YP_005372690.1| ribonuclease activity regulator protein RraA [Corallococcus
coralloides DSM 2259]
gi|380734270|gb|AFE10272.1| ribonuclease activity regulator protein RraA [Corallococcus
coralloides DSM 2259]
Length = 165
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 4 VTTAEVCDAN---PQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++CDA+ PQ V+ +P F YG R F GPI T++ EDN L+R+ LEE
Sbjct: 7 LKTADLCDAHSGTPQFQVA------EPGFLDYGGRLSFFGPISTVRAPEDNSLVRKALEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGGS RCA++G Q NGWAG+VVNGCIRD +E+ DIGV+AL +
Sbjct: 61 PGQGRVLVVDGGGSRRCALVGDVLAALGQKNGWAGVVVNGCIRDAEEVGRTDIGVKALGT 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP+K++K+ G++ V + G G LYAD DGI+ S+ L
Sbjct: 121 HPLKSSKRNEGQRDVEVRFAGVTFVPGHHLYADADGIVTSQQAL 164
>gi|217969669|ref|YP_002354903.1| ribonuclease activity regulator protein RraA [Thauera sp. MZ1T]
gi|217506996|gb|ACK54007.1| regulator of ribonuclease activity A [Thauera sp. MZ1T]
Length = 159
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 101/161 (62%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CDA+ +L + P+F YG R F GPI TLK+FEDN +R+ LE GN
Sbjct: 3 IQTADLCDAHED-----KLAVVAPMFASYGGRPSFGGPIATLKIFEDNSFVRKALEGPGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLV+DGG S+RCA++G A NGWAGI+V GCIRD I D+GV AL +HP
Sbjct: 58 GRVLVIDGGASMRCALVGDQLAELAVKNGWAGILVYGCIRDSKAIGEMDLGVFALGTHPK 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K K+ +GE +P+ GG G +YAD DG+++S L
Sbjct: 118 KTVKRNVGEVDIPVGFGGVTFQPGHHVYADEDGVVVSAEPL 158
>gi|332528206|ref|ZP_08404234.1| ribonuclease activity regulator protein RraA [Rubrivivax
benzoatilyticus JA2]
gi|332112774|gb|EGJ12567.1| ribonuclease activity regulator protein RraA [Rubrivivax
benzoatilyticus JA2]
Length = 163
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M +T ++CD + + G+ R L P+F YG R F+GP T+K EDN L++ L+E
Sbjct: 1 MNDFSTCDLCDRH-KDDDRGDFRVLPPVFASYGGRVRFAGPASTVKCHEDNSLVKAALDE 59
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGGSLR A++GGN A NGWAG+VV+G +RD+ E+ CD+G+RALA+
Sbjct: 60 PGAGRVLVVDGGGSLRRALVGGNLAAAAAKNGWAGLVVDGAVRDLAELAACDVGIRALAA 119
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
PM K+ G + VP+ + G R++ GEW+ AD DGI++ A
Sbjct: 120 MPMPTVKRHEGRRDVPVQVQGVRVAPGEWVVADEDGIVVMPAR 162
>gi|359784710|ref|ZP_09287876.1| ribonuclease activity regulator protein RraA [Halomonas sp. GFAJ-1]
gi|359297855|gb|EHK62077.1| ribonuclease activity regulator protein RraA [Halomonas sp. GFAJ-1]
Length = 165
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 106/163 (65%), Gaps = 6/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T ++CDA P++ V L+P+F +G F GPI T+K FEDN ++++ + E G
Sbjct: 7 IVTPDLCDAYPEVTV------LEPMFANFGGVDSFYGPIRTVKCFEDNSMVKQAVAEPGE 60
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVD GGS RCA+LG QA NGWAG+V+ GC+RDVD + +GV+AL SHP
Sbjct: 61 GAVLVVDAGGSNRCAMLGDMLAEQAAKNGWAGVVMFGCVRDVDILVTLPLGVQALGSHPR 120
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ K G G++ +P+T G + G+WLYAD +GI+I+ L +
Sbjct: 121 RSEKHGEGQRDIPVTFAGATLHPGQWLYADNNGIIIADKALHI 163
>gi|402820340|ref|ZP_10869907.1| hypothetical protein IMCC14465_11410 [alpha proteobacterium
IMCC14465]
gi|402511083|gb|EJW21345.1| hypothetical protein IMCC14465_11410 [alpha proteobacterium
IMCC14465]
Length = 162
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 5/162 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++ DA ++V L F+ +G+R F+GPIVTL FEDN +RE LE KG
Sbjct: 6 ICTADLSDAYSDMLVY-----LGLAFRDFGKRIAFNGPIVTLDTFEDNGALRELLEGKGE 60
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRV+VVDG S CA+LGGN A+ NGWAGIV+NG +RD E+ +IG++AL +HP
Sbjct: 61 GRVIVVDGHASSNCALLGGNLGELAEANGWAGIVINGLVRDTMELAEANIGIKALGTHPK 120
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ K+G+G +VP+ I G I G WLYAD DG++I+ +L
Sbjct: 121 KSIKRGVGSVNVPLRIEGINIYPGAWLYADADGVIIAPEKLK 162
>gi|410694065|ref|YP_003624687.1| Regulator of ribonuclease activity A [Thiomonas sp. 3As]
gi|294340490|emb|CAZ88874.1| Regulator of ribonuclease activity A [Thiomonas sp. 3As]
Length = 169
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 102/163 (62%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
AL +T ++CDA+ + + LR L P+F+ +G+ F G I T++ +DN L+R LE
Sbjct: 3 ALFSTCDLCDAHRDALHTDALRVLPPVFRSFGKISRFRGKIATVQCHDDNALVRATLESA 62
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G RVLVVDG S++ A+LGGN A NGWAG++VNGC+RDV EI IGV ALAS
Sbjct: 63 GMARVLVVDGAASMKRALLGGNLAALASQNGWAGVLVNGCVRDVHEILQVPIGVLALASM 122
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K G G +TI + GEWLYAD DG++ISR +L
Sbjct: 123 PAPPEKHGKGRVDAVVTIQDVIVRPGEWLYADEDGVIISREQL 165
>gi|254447704|ref|ZP_05061170.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase [gamma
proteobacterium HTCC5015]
gi|198263047|gb|EDY87326.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase [gamma
proteobacterium HTCC5015]
Length = 158
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 98/139 (70%)
Query: 27 PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVV 86
P F+ +G R F GPI TLKVFEDN L+RE LE+ G GRVLVVDGGGS+RCA++GGN
Sbjct: 20 PGFRDFGGRIAFGGPITTLKVFEDNTLVREQLEKPGEGRVLVVDGGGSMRCALVGGNLAE 79
Query: 87 QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISD 146
NGWAGI+V GCIRD EI +IGV+AL + P K+ K+G G+ +P+T G +
Sbjct: 80 LGVKNGWAGIIVFGCIRDSKEIGALEIGVKALDTMPQKSVKRGEGQIDLPVTFHGVTFTP 139
Query: 147 GEWLYADTDGILISRAELS 165
GE+ YAD DG++++ +L+
Sbjct: 140 GEYTYADEDGVVVAPEKLA 158
>gi|108758203|ref|YP_628661.1| ribonuclease activity regulator protein RraA [Myxococcus xanthus DK
1622]
gi|108462083|gb|ABF87268.1| putative regulator of ribonuclease activity A [Myxococcus xanthus
DK 1622]
Length = 165
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 106/159 (66%), Gaps = 3/159 (1%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDA+ + + +P FQ YG + F+GPI T++ EDN L+R+ LEE G GR
Sbjct: 9 TADLCDAHAG---TPRFQIAEPGFQDYGGVRTFAGPISTVRAPEDNSLVRKALEEPGQGR 65
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA++G + AQ NGWAG+VVNGCIRD +++ IGV+AL +HP+K+
Sbjct: 66 VLVVDGGGSRRCALVGDQLALLAQQNGWAGVVVNGCIRDAEDVGRMRIGVKALGTHPLKS 125
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ G++ V + G G ++YAD DGI+ S + L
Sbjct: 126 LKRNEGQRDVEVRFAGVTFRPGHYVYADLDGIVTSESPL 164
>gi|260550139|ref|ZP_05824353.1| demethylmenaquinone methyltransferase [Acinetobacter sp. RUH2624]
gi|424055731|ref|ZP_17793254.1| RraA family protein [Acinetobacter nosocomialis Ab22222]
gi|425742664|ref|ZP_18860763.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-487]
gi|260406894|gb|EEX00373.1| demethylmenaquinone methyltransferase [Acinetobacter sp. RUH2624]
gi|407438222|gb|EKF44766.1| RraA family protein [Acinetobacter nosocomialis Ab22222]
gi|425485916|gb|EKU52295.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-487]
Length = 168
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG RQ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVTPSMDGKFFKSYGARQTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTGRVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE +P+ GG I G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDIPLYFGGVTIQSGDFIYADNNGIVIAKEKL 167
>gi|372271925|ref|ZP_09507973.1| ribonuclease activity regulator protein RraA [Marinobacterium
stanieri S30]
Length = 164
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 111/160 (69%), Gaps = 6/160 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD +L+ + ++P+F +G R+ F G IVT+K FEDN L+RE + + G G+VL
Sbjct: 7 DLCDHFEELV-----QVVEPMFANFGGRETFGGEIVTIKAFEDNSLVREQVAQPGEGKVL 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCD-IGVRALASHPMKAN 126
VVDGGGSLR A+LG +A+ NGW GI++ GCIRDV+ I D +GV+ALA+HPMK
Sbjct: 62 VVDGGGSLRRAMLGDMLAEKAEKNGWEGIIIYGCIRDVNAIGALDNLGVQALATHPMKTE 121
Query: 127 KKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K G+G+ +VP+T GG GE++YAD +G+L++ +L +
Sbjct: 122 KLGVGQLNVPVTFGGVTCRPGEFVYADNNGVLVAPRKLEL 161
>gi|296136257|ref|YP_003643499.1| ribonuclease activity A regulator [Thiomonas intermedia K12]
gi|295796379|gb|ADG31169.1| regulator of ribonuclease activity A [Thiomonas intermedia K12]
Length = 169
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 101/163 (61%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
AL +T ++CDA+ + + LR L P+F+ +G+ F G I T++ +DN L+R LE
Sbjct: 3 ALFSTCDLCDAHRDALHTDALRVLPPVFRSFGKISRFRGKIATVQCHDDNALVRATLESA 62
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G RVLVVDG S++ A+LGGN A NGWAG++VNGC+RDV EI IGV ALA
Sbjct: 63 GMARVLVVDGAASMKRALLGGNLAALASQNGWAGVLVNGCVRDVHEILQVPIGVLALAPM 122
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K G G V +TI + GEWLYAD DG++ISR L
Sbjct: 123 PAPPEKHGKGRVDVAVTIQDVIVRPGEWLYADEDGVIISREPL 165
>gi|358450690|ref|ZP_09161143.1| ribonuclease activity regulator protein RraA [Marinobacter
manganoxydans MnI7-9]
gi|385331969|ref|YP_005885920.1| ribonuclease activity regulator protein RraA [Marinobacter
adhaerens HP15]
gi|311695119|gb|ADP97992.1| ribonuclease activity regulator protein RraA [Marinobacter
adhaerens HP15]
gi|357225066|gb|EHJ03578.1| ribonuclease activity regulator protein RraA [Marinobacter
manganoxydans MnI7-9]
Length = 159
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 109/164 (66%), Gaps = 6/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + T ++CD P+++V ++P F YG + F G IVT+K FEDN +++E + +
Sbjct: 1 MTTIITPDLCDEFPEVLV------VEPGFNNYGGNKAFGGEIVTVKCFEDNSVVKEQVGQ 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRV+VVDGG S R A+LG +A +NGWAG+++ GC+RDVDEI +GV+AL +
Sbjct: 55 PGNGRVMVVDGGASKRHALLGDMLAEKAASNGWAGLIIYGCVRDVDEIGNTALGVQALGT 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP K+ K+G+G+ +VP+T G G ++YAD +GI++S L
Sbjct: 115 HPRKSEKRGLGDLNVPVTFHGVTFHPGHYVYADNNGIIVSEKPL 158
>gi|121605271|ref|YP_982600.1| ribonuclease activity regulator protein RraA [Polaromonas
naphthalenivorans CJ2]
gi|120594240|gb|ABM37679.1| regulator of ribonuclease activity A [Polaromonas naphthalenivorans
CJ2]
Length = 170
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CD + SG+ R L P+F+ +G FSGP+VT+K FEDN L++ ++ G G
Sbjct: 10 ATCDLCDIHKN-DSSGQFRVLPPVFKDFGGILKFSGPVVTVKCFEDNSLVKAAVDSPGEG 68
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGG SLR A+LGGN A NGWAG+V++GC+RDV E+ C G+RALA+ P+
Sbjct: 69 RVLVVDGGASLRRALLGGNLGAAAAKNGWAGVVIDGCVRDVAELAQCSTGIRALAAMPLP 128
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ G++ + + + G + G+WLYAD DG+++ + L+
Sbjct: 129 TEKRQEGQQGLAVQVQGVWVHPGDWLYADEDGMVLMASPLT 169
>gi|417547507|ref|ZP_12198589.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-18]
gi|417552117|ref|ZP_12203187.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-81]
gi|417561504|ref|ZP_12212383.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC137]
gi|417565861|ref|ZP_12216735.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC143]
gi|421200347|ref|ZP_15657507.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC109]
gi|421454100|ref|ZP_15903451.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-123]
gi|421631645|ref|ZP_16072309.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-13]
gi|421802869|ref|ZP_16238813.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-A-694]
gi|395524086|gb|EJG12175.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC137]
gi|395557617|gb|EJG23618.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC143]
gi|395563948|gb|EJG25600.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC109]
gi|400213508|gb|EJO44463.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-123]
gi|400389256|gb|EJP52327.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-18]
gi|400392376|gb|EJP59422.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-81]
gi|408710706|gb|EKL55929.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-13]
gi|410414167|gb|EKP65973.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-A-694]
Length = 168
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG RQ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVTPSMDGKFFKSYGARQTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALASLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE +P+ GG I G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDIPLYFGGVTIQSGDFIYADNNGIVIAKEKL 167
>gi|386828175|ref|ZP_10115282.1| RraA family protein [Beggiatoa alba B18LD]
gi|386429059|gb|EIJ42887.1| RraA family protein [Beggiatoa alba B18LD]
Length = 160
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 104/161 (64%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD P+++ + PIF+ +G + F G I T+KV EDNVL++E L G G+
Sbjct: 5 TPDLCDKYPKVV-----KVADPIFRSFGLKTAFGGQIKTVKVHEDNVLVKEILGTAGEGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGG SLRCA++G A +NGWAGI+V GCIRD IN IG++AL +HP+K+
Sbjct: 60 VLVIDGGASLRCALVGDIIAKSAADNGWAGIIVYGCIRDSSVINTLPIGIKALNTHPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K G G+K VP+T G ++YAD DG++++ L +
Sbjct: 120 HKHGRGDKDVPVTFAGVTFFPDHYVYADADGVIVAEHALEM 160
>gi|334131061|ref|ZP_08504830.1| Regulator of ribonuclease activity A [Methyloversatilis universalis
FAM5]
gi|333443890|gb|EGK71848.1| Regulator of ribonuclease activity A [Methyloversatilis universalis
FAM5]
Length = 159
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
++TA++CD ELR P+F+ YG R F GPI TLK+FEDN L+R+ LE GN
Sbjct: 3 LSTADLCDQ-----FESELRICAPMFRSYGGRTSFGGPITTLKLFEDNGLVRKALEAPGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+R A++G A NGWAGIVV GCIRD I D+GV AL +HP+
Sbjct: 58 GRVLVVDGGGSMRRALVGDQIAALAVKNGWAGIVVYGCIRDSAAIGEMDLGVFALGTHPL 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K K+ G+ + ++ GG G LYAD DG+++S L
Sbjct: 118 KTVKRNEGQADLTVSFGGIDFVPGHHLYADGDGVIVSARAL 158
>gi|169796106|ref|YP_001713899.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AYE]
gi|184157966|ref|YP_001846305.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ACICU]
gi|213157161|ref|YP_002319206.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AB0057]
gi|215483561|ref|YP_002325780.1| Regulator of ribonuclease activity A [Acinetobacter baumannii
AB307-0294]
gi|239502155|ref|ZP_04661465.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AB900]
gi|301345061|ref|ZP_07225802.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AB056]
gi|301510452|ref|ZP_07235689.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AB058]
gi|301595226|ref|ZP_07240234.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AB059]
gi|384132065|ref|YP_005514677.1| RraA [Acinetobacter baumannii 1656-2]
gi|384143055|ref|YP_005525765.1| regulator of ribonuclease activity [Acinetobacter baumannii
MDR-ZJ06]
gi|385237411|ref|YP_005798750.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii TCDC-AB0715]
gi|387124076|ref|YP_006289958.1| RraA family protein [Acinetobacter baumannii MDR-TJ]
gi|416145627|ref|ZP_11600579.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AB210]
gi|417544919|ref|ZP_12196005.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC032]
gi|417568939|ref|ZP_12219802.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC189]
gi|417573626|ref|ZP_12224480.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Canada BC-5]
gi|417579069|ref|ZP_12229902.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-17]
gi|417869943|ref|ZP_12514920.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH1]
gi|417873351|ref|ZP_12518225.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH2]
gi|417878456|ref|ZP_12523067.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH3]
gi|417883665|ref|ZP_12527892.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH4]
gi|421203248|ref|ZP_15660390.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AC12]
gi|421534013|ref|ZP_15980291.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AC30]
gi|421621328|ref|ZP_16062251.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC074]
gi|421624808|ref|ZP_16065672.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC098]
gi|421630311|ref|ZP_16071019.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC180]
gi|421644884|ref|ZP_16085358.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-235]
gi|421648576|ref|ZP_16088979.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-251]
gi|421652780|ref|ZP_16093128.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC0162]
gi|421653500|ref|ZP_16093833.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-72]
gi|421658332|ref|ZP_16098566.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-83]
gi|421661980|ref|ZP_16102150.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC110]
gi|421668923|ref|ZP_16108956.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC087]
gi|421672299|ref|ZP_16112256.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC099]
gi|421676532|ref|ZP_16116439.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC065]
gi|421678770|ref|ZP_16118654.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC111]
gi|421688163|ref|ZP_16127866.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-143]
gi|421691259|ref|ZP_16130923.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-116]
gi|421696862|ref|ZP_16136441.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-692]
gi|421699810|ref|ZP_16139334.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-58]
gi|421703493|ref|ZP_16142956.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ZWS1122]
gi|421707216|ref|ZP_16146615.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ZWS1219]
gi|421789420|ref|ZP_16225679.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-82]
gi|421793339|ref|ZP_16229466.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-2]
gi|421797327|ref|ZP_16233373.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-21]
gi|421800345|ref|ZP_16236323.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Canada BC1]
gi|421809274|ref|ZP_16245114.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC035]
gi|424052505|ref|ZP_17790037.1| RraA family protein [Acinetobacter baumannii Ab11111]
gi|424060043|ref|ZP_17797534.1| RraA family protein [Acinetobacter baumannii Ab33333]
gi|424063934|ref|ZP_17801419.1| RraA family protein [Acinetobacter baumannii Ab44444]
gi|425748888|ref|ZP_18866870.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-348]
gi|425754331|ref|ZP_18872194.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-113]
gi|445406629|ref|ZP_21431906.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-57]
gi|445432439|ref|ZP_21439184.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC021]
gi|445448740|ref|ZP_21444020.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-A-92]
gi|445458883|ref|ZP_21447423.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC047]
gi|445469531|ref|ZP_21451188.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC338]
gi|445476311|ref|ZP_21453760.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-78]
gi|445488771|ref|ZP_21458380.1| regulator of ribonuclease activity A [Acinetobacter baumannii
AA-014]
gi|169149033|emb|CAM86910.1| Regulator of ribonuclease activity [Acinetobacter baumannii AYE]
gi|183209560|gb|ACC56958.1| Demethylmenaquinone methyltransferase [Acinetobacter baumannii
ACICU]
gi|193077265|gb|ABO12046.2| S-adenosylmethionine2-demethylmenaquinone methyltransferase
[Acinetobacter baumannii ATCC 17978]
gi|213056321|gb|ACJ41223.1| regulator of ribonuclease activity A [Acinetobacter baumannii
AB0057]
gi|213988938|gb|ACJ59237.1| Regulator of ribonuclease activity A [Acinetobacter baumannii
AB307-0294]
gi|322508285|gb|ADX03739.1| RraA [Acinetobacter baumannii 1656-2]
gi|323517911|gb|ADX92292.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii TCDC-AB0715]
gi|333366693|gb|EGK48707.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AB210]
gi|342229253|gb|EGT94122.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH1]
gi|342231825|gb|EGT96626.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH2]
gi|342232569|gb|EGT97342.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH3]
gi|342235442|gb|EGU00041.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ABNIH4]
gi|347593548|gb|AEP06269.1| regulator of ribonuclease activity [Acinetobacter baumannii
MDR-ZJ06]
gi|385878568|gb|AFI95663.1| RraA family protein [Acinetobacter baumannii MDR-TJ]
gi|395555234|gb|EJG21236.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC189]
gi|395568207|gb|EJG28881.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-17]
gi|398327325|gb|EJN43461.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AC12]
gi|400209194|gb|EJO40164.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Canada BC-5]
gi|400382807|gb|EJP41485.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC032]
gi|404560595|gb|EKA65837.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-692]
gi|404561910|gb|EKA67135.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-143]
gi|404563410|gb|EKA68620.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-116]
gi|404571511|gb|EKA76571.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-58]
gi|404667995|gb|EKB35904.1| RraA family protein [Acinetobacter baumannii Ab33333]
gi|404671955|gb|EKB39797.1| RraA family protein [Acinetobacter baumannii Ab11111]
gi|404673823|gb|EKB41594.1| RraA family protein [Acinetobacter baumannii Ab44444]
gi|407192287|gb|EKE63470.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ZWS1122]
gi|407192657|gb|EKE63834.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ZWS1219]
gi|408503898|gb|EKK05650.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-235]
gi|408504197|gb|EKK05948.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC0162]
gi|408512853|gb|EKK14491.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-72]
gi|408515410|gb|EKK16998.1| regulator of ribonuclease activity A [Acinetobacter baumannii
IS-251]
gi|408697984|gb|EKL43484.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC180]
gi|408698627|gb|EKL44116.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC074]
gi|408700502|gb|EKL45953.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC098]
gi|408710130|gb|EKL55366.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-83]
gi|408715472|gb|EKL60600.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC110]
gi|409988000|gb|EKO44175.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii AC30]
gi|410379057|gb|EKP31666.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC087]
gi|410379261|gb|EKP31865.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC099]
gi|410379599|gb|EKP32202.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC065]
gi|410392333|gb|EKP44695.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC111]
gi|410397146|gb|EKP49399.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-2]
gi|410397408|gb|EKP49660.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-21]
gi|410398719|gb|EKP50926.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-82]
gi|410407842|gb|EKP59818.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Canada BC1]
gi|410415058|gb|EKP66850.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC035]
gi|425489869|gb|EKU56170.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-348]
gi|425497145|gb|EKU63257.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-113]
gi|444757623|gb|ELW82144.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-A-92]
gi|444758735|gb|ELW83225.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC021]
gi|444767607|gb|ELW91854.1| regulator of ribonuclease activity A [Acinetobacter baumannii
AA-014]
gi|444774193|gb|ELW98281.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC338]
gi|444775292|gb|ELW99362.1| regulator of ribonuclease activity A [Acinetobacter baumannii
OIFC047]
gi|444777982|gb|ELX02002.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-78]
gi|444781276|gb|ELX05195.1| regulator of ribonuclease activity A [Acinetobacter baumannii
Naval-57]
Length = 168
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG RQ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVTPSMDGKFFKSYGARQTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE +P+ GG I G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDIPLYFGGVTIQSGDFIYADNNGIVIAKEKL 167
>gi|332851757|ref|ZP_08433682.1| regulator of ribonuclease activity A [Acinetobacter baumannii
6013150]
gi|332865863|ref|ZP_08436647.1| regulator of ribonuclease activity A [Acinetobacter baumannii
6013113]
gi|332874426|ref|ZP_08442329.1| regulator of ribonuclease activity A [Acinetobacter baumannii
6014059]
gi|332729764|gb|EGJ61099.1| regulator of ribonuclease activity A [Acinetobacter baumannii
6013150]
gi|332735075|gb|EGJ66160.1| regulator of ribonuclease activity A [Acinetobacter baumannii
6013113]
gi|332737270|gb|EGJ68194.1| regulator of ribonuclease activity A [Acinetobacter baumannii
6014059]
Length = 162
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG RQ F G +VT+K FEDN ++E L
Sbjct: 2 TCDLLDDNPE----KDLQVVTPSMDGKFFKSYGARQTFGGQVVTVKCFEDNSRVKELLAT 57
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 58 DGTGKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 117
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE +P+ GG I G+++YAD +GI+I++ +L
Sbjct: 118 IPQKSNRKGIGEVDIPLYFGGVTIQSGDFIYADNNGIVIAKEKL 161
>gi|338531006|ref|YP_004664340.1| ribonuclease activity regulator protein RraA [Myxococcus fulvus
HW-1]
gi|337257102|gb|AEI63262.1| ribonuclease activity regulator protein RraA [Myxococcus fulvus
HW-1]
Length = 165
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 106/159 (66%), Gaps = 3/159 (1%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDA+ S +L+ +P F YG + F+GPI T++ EDN L+R+ LEE G GR
Sbjct: 9 TADLCDAHAG---SPQLQIAEPGFHDYGGVRTFAGPISTVRAPEDNSLVRKALEEPGQGR 65
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA++G + Q NGWAG+VVNGCIRD +++ +GV+AL +HP+K+
Sbjct: 66 VLVVDGGGSRRCALVGDQLALLGQQNGWAGVVVNGCIRDAEDVGRMRLGVKALGTHPLKS 125
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ G++ V + G G ++YAD DGI+ S + L
Sbjct: 126 LKRNEGQRDVEVRFAGVVFRPGHYVYADADGIITSESPL 164
>gi|374702325|ref|ZP_09709195.1| ribonuclease activity regulator protein RraA [Pseudomonas sp. S9]
Length = 161
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 106/159 (66%), Gaps = 6/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P E+ ++P+F +G R F G IVT+K FEDN +++E +E G G+
Sbjct: 5 TPDLCDAYP------EVEVVEPMFSNFGGRDSFGGEIVTVKCFEDNSVVKEQVELPGKGK 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+VVDGG S+R A+LG +A NGW GI++ GC+RDVD + +GV+ALASHPMK
Sbjct: 59 VMVVDGGASMRRALLGDMLAEKAAKNGWEGIIIYGCVRDVDVLAQTAVGVQALASHPMKT 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+GIG+ +V +T GG G ++YAD +GI++S L
Sbjct: 119 DKRGIGDLNVAVTFGGVTFRPGHFVYADNNGIIVSPTAL 157
>gi|226940396|ref|YP_002795470.1| ribonuclease activity regulator protein RraA [Laribacter
hongkongensis HLHK9]
gi|254809479|sp|C1D7M1.1|RRAAH_LARHH RecName: Full=Putative regulator of ribonuclease activity
gi|226715323|gb|ACO74461.1| MenG [Laribacter hongkongensis HLHK9]
Length = 159
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 99/155 (63%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD S L+ L P + +G F+G I TLKVFEDN +RE L E G GR
Sbjct: 5 TADLCDE-----FSDRLQILAPGYASFGGHARFAGRIATLKVFEDNSRVREMLSEPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA++G A NGWAGIVV GCIRD + +GVRALA+HP+K+
Sbjct: 60 VLVVDGGGSRRCALVGDQLGALAVRNGWAGIVVYGCIRDSVALGLLPLGVRALATHPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K G+GE+ + +T G G+WLYAD DG++ S
Sbjct: 120 VKNGVGERELAVTFDGATFRPGDWLYADEDGVITS 154
>gi|255075967|ref|XP_002501658.1| predicted protein [Micromonas sp. RCC299]
gi|226516922|gb|ACO62916.1| predicted protein [Micromonas sp. RCC299]
Length = 231
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 97/135 (71%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
F+ +G FSGP T+K +E+N L+RE L E GNGRVLVVDGGGS+RCA+LG N A
Sbjct: 93 FRDFGGVTRFSGPASTVKCYENNPLVREALGEPGNGRVLVVDGGGSMRCALLGDNLAGMA 152
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
+NGWAGIV+NGC+RD ++I +GV+A+A HP+K++K+ G + VP+T G + G+
Sbjct: 153 VSNGWAGIVINGCLRDSEDIGKMRLGVKAIAPHPVKSSKRDPGMREVPVTFAGVTVRPGD 212
Query: 149 WLYADTDGILISRAE 163
W+YAD DG+L+ E
Sbjct: 213 WIYADMDGMLVGGPE 227
>gi|169633475|ref|YP_001707211.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii SDF]
gi|169152267|emb|CAP01172.1| Regulator of ribonuclease activity [Acinetobacter baumannii]
Length = 168
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQPI-----FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG RQ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVTPSMDGKSFKSYGARQTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE +P+ GG I G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDIPLYFGGVTIQSGDFIYADNNGIVIAKEKL 167
>gi|260555155|ref|ZP_05827376.1| demethylmenaquinone methyltransferase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|403675863|ref|ZP_10937970.1| ribonuclease activity regulator protein RraA [Acinetobacter sp.
NCTC 10304]
gi|260411697|gb|EEX04994.1| demethylmenaquinone methyltransferase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|452950885|gb|EME56336.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii MSP4-16]
Length = 168
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG RQ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVTPSMDGKFFKSYGARQTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE +P+ GG I G ++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDIPLYFGGVTIQSGNFIYADNNGIVIAKEKL 167
>gi|37681202|ref|NP_935811.1| ribonuclease activity regulator protein RraA [Vibrio vulnificus
YJ016]
gi|61216082|sp|Q7MH54.1|RRAA_VIBVY RecName: Full=Regulator of ribonuclease activity A
gi|37199953|dbj|BAC95782.1| demethylmenaquinone methyltransferase [Vibrio vulnificus YJ016]
Length = 173
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYMDQVDVVEPMFSNFGGRASFAGQITTVKCFEDNALIRETLEQDGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A+L G A+ N W GIVV GC+R+VDE+ +IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALLDGELAAIAEENEWEGIVVYGCVREVDELEDMNIGIQALASIPVSA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G+GE VP+ GG ++LYADT GI++S+ LS
Sbjct: 120 AMQGVGEVDVPVNFGGVTFLPEDYLYADTTGIILSQEPLS 159
>gi|309791044|ref|ZP_07685580.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Oscillochloris trichoides DG-6]
gi|308226899|gb|EFO80591.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Oscillochloris trichoides DG6]
Length = 157
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+++CDA+ + V+ +P + G F GP+VTLK+FEDN L+R LEE G GR
Sbjct: 5 TSDLCDAHDDVQVA------EPRLRHVGGVTQFCGPVVTLKLFEDNSLVRSTLEEPGAGR 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA++G A N WAGIVV GC+RD E+ IG+ ALA+HP ++
Sbjct: 59 VLVVDGGGSLRCALVGDQIAALAVRNAWAGIVVYGCVRDSAELGQLPIGIMALATHPRRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G++ +P+T G I G ++YAD DG++++ EL
Sbjct: 119 VKRGEGQRDLPVTFLGVTIRPGSYVYADADGLIVAETEL 157
>gi|149376757|ref|ZP_01894515.1| ribonuclease activity regulator protein RraA [Marinobacter algicola
DG893]
gi|149358996|gb|EDM47462.1| ribonuclease activity regulator protein RraA [Marinobacter algicola
DG893]
Length = 160
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 107/163 (65%), Gaps = 6/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T ++CD P+++V ++P F+ +G F G IVT+K FEDN +++E + GN
Sbjct: 3 IVTPDLCDDYPEILV------VEPGFRNFGGVDAFGGEIVTVKCFEDNSIVKEQVALPGN 56
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRV+VVDGGGS R A+LG +A +NGWAG+V+ GCIRDVD I +GV+AL +HP
Sbjct: 57 GRVMVVDGGGSKRAALLGDMLAEKAADNGWAGLVIYGCIRDVDVIGKTALGVQALGTHPR 116
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K K+G+G+ VP+T GG G ++YAD +GI++S L +
Sbjct: 117 KTEKRGVGDLDVPVTFGGVTFHPGHYIYADNNGIVVSEKPLKI 159
>gi|389711171|ref|ZP_10186982.1| ribonuclease activity regulator protein RraA [Acinetobacter sp. HA]
gi|388610023|gb|EIM39160.1| ribonuclease activity regulator protein RraA [Acinetobacter sp. HA]
Length = 169
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP +L+ + P F+ YG R+ F G IVT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPD----KDLQFVTPCLDGKFFKSYGARKSFGGQIVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+++ GC+RDVD I D+GV ALAS
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDLIAESAVKNHWNGVIIYGCVRDVDAIAELDLGVHALAS 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE VP+ GG GE++YAD +GI++S+ +L
Sbjct: 124 IPQKSNRKGIGEVDVPLYFGGVTFQSGEYVYADNNGIVLSKEKL 167
>gi|171058692|ref|YP_001791041.1| ribonuclease activity regulator protein RraA [Leptothrix cholodnii
SP-6]
gi|170776137|gb|ACB34276.1| regulator of ribonuclease activity A [Leptothrix cholodnii SP-6]
Length = 167
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CDA+ G+ R L P+F+ +G R FSG +VT+K EDN + +E G G
Sbjct: 9 ATCDLCDAHKN-DSDGDFRVLPPVFRDFGARSAFSGRVVTVKCHEDNSHFKAAVESPGLG 67
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A+LGGN A NGWAG+V++GC+RDV E+ ++G+RALA+ P+
Sbjct: 68 RVLVVDGGGSLRRALLGGNLGAAAARNGWAGLVIDGCVRDVAELAVSEVGIRALAAMPLP 127
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+++G+G+ V + I G + G+WL AD DGI++
Sbjct: 128 TDRRGVGQTDVAVQIQGVWVRPGDWLAADADGIVV 162
>gi|374623419|ref|ZP_09695929.1| ribonuclease activity regulator protein RraA [Ectothiorhodospira
sp. PHS-1]
gi|373942530|gb|EHQ53075.1| ribonuclease activity regulator protein RraA [Ectothiorhodospira
sp. PHS-1]
Length = 164
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 104/157 (66%), Gaps = 9/157 (5%)
Query: 6 TAEVCDA---NPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
TA++CD +P L V+ +P+F+ +G + FSG IVTLK FEDN +RE L E G
Sbjct: 11 TADLCDEYEDHPGLQVA------EPLFRDFGGERAFSGEIVTLKCFEDNTKVREMLGEDG 64
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G+VLVVD GGSLRCA+LG + A NGWAG+V+ GCIRD G +GV+ALA+HP
Sbjct: 65 RGKVLVVDAGGSLRCAMLGDQLAMLAVKNGWAGVVMYGCIRDSRACAGMPLGVKALATHP 124
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+K+ K G+G+ +VP+ G G+ L+AD DGI++
Sbjct: 125 LKSRKLGVGQVNVPVKFAGVGFKPGDRLFADEDGIVV 161
>gi|161501827|ref|NP_760277.2| ribonuclease activity regulator protein RraA [Vibrio vulnificus
CMCP6]
gi|320155141|ref|YP_004187520.1| ribonuclease E inhibitor RraA [Vibrio vulnificus MO6-24/O]
gi|37088808|sp|Q8DCP6.2|RRAA_VIBVU RecName: Full=Regulator of ribonuclease activity A
gi|218218154|gb|ACK76427.1| RraAV1 [Vibrio vulnificus MO6-24/O]
gi|319930453|gb|ADV85317.1| ribonuclease E inhibitor RraA [Vibrio vulnificus MO6-24/O]
gi|319999195|gb|AAO09804.2| regulator of ribonuclease activity A [Vibrio vulnificus CMCP6]
Length = 173
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYMDQVDVVEPMFSNFGGRASFAGQITTVKCFEDNALIRETLEQDGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A+L G A+ N W GIVV GC+R+VDE+ +IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALLDGELAAIAEENEWEGIVVYGCVREVDELEDMNIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G+GE VP+ GG ++LYADT GI++S+ LS
Sbjct: 120 AMQGVGEVDVPVNFGGVTFLPEDYLYADTTGIILSQEPLS 159
>gi|345871548|ref|ZP_08823492.1| Regulator of ribonuclease activity A [Thiorhodococcus drewsii AZ1]
gi|343920206|gb|EGV30942.1| Regulator of ribonuclease activity A [Thiorhodococcus drewsii AZ1]
Length = 160
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 104/159 (65%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D++ + LR +PIF+ +G R F GPIVT+K FEDN ++ L E G GR
Sbjct: 5 TADLYDSHGE-----SLRVCEPIFRDFGGRVRFCGPIVTVKCFEDNSFVKSTLAEPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVD GGSLRCA+LG A GWAG+++ GC+RD EI +GV+ALA++P K+
Sbjct: 60 VLVVDAGGSLRCAMLGDLIAASAVEQGWAGVILFGCVRDSAEIAEMPLGVKALATNPRKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++G G++ +P+T G R + G+ +Y D DGIL++ L
Sbjct: 120 QRRGEGQRDIPVTFAGVRFASGDQVYCDEDGILVAEQSL 158
>gi|262376173|ref|ZP_06069403.1| demethylmenaquinone methyltransferase [Acinetobacter lwoffii SH145]
gi|262308774|gb|EEY89907.1| demethylmenaquinone methyltransferase [Acinetobacter lwoffii SH145]
gi|407007803|gb|EKE23360.1| Regulator of ribonuclease activity A [uncultured bacterium]
Length = 169
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 106/168 (63%), Gaps = 9/168 (5%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIRE 56
A T ++ D +P+L EL+ + P F+ YG R+ F G IVT+K FEDN ++E
Sbjct: 4 AAFVTCDLLDDHPEL----ELQVVTPCLDGKFFKSYGARKTFGGQIVTVKCFEDNSRVKE 59
Query: 57 FLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVR 116
L G G+VLVVDGG S+RCA++G A N W G+++ GC+RDVD I D+GV
Sbjct: 60 LLATDGTGKVLVVDGGASMRCALMGDLIAESAVKNHWNGVIIYGCVRDVDAIAELDLGVH 119
Query: 117 ALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
ALA+ P K+N+KG+GE + + GG + GE++YAD +GI++S+ L
Sbjct: 120 ALAAIPQKSNRKGVGEVDISLCFGGVTFNAGEYVYADNNGIVVSKTAL 167
>gi|221066191|ref|ZP_03542296.1| regulator of ribonuclease activity A [Comamonas testosteroni KF-1]
gi|220711214|gb|EED66582.1| regulator of ribonuclease activity A [Comamonas testosteroni KF-1]
Length = 171
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T ++CDA+ S + R L P+F YG F G + T++ +DN L+R L E G+G
Sbjct: 11 STCDLCDAHIS-DDSSDFRVLPPVFHSYGANVGFMGEVSTVQCLDDNSLVRAALAEPGDG 69
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A++GGN A NGWAG++V GC+RD+ E+ +G+ ALA +PM
Sbjct: 70 RVLVVDGGGSLRRALVGGNVAASAAQNGWAGVLVYGCVRDLAELKAASVGLYALALNPMP 129
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G + V + I G I G+WLYAD DGI++SR L
Sbjct: 130 TVKQGQGLRDVYVQIAGLWIRPGDWLYADADGIVLSRRNL 169
>gi|359428524|ref|ZP_09219556.1| ribonuclease regulator RraA [Acinetobacter sp. NBRC 100985]
gi|358236067|dbj|GAB01095.1| ribonuclease regulator RraA [Acinetobacter sp. NBRC 100985]
Length = 170
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG R+ F G IVT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVTPCLDGKFFKSYGARKTFGGQIVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD I D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDMIAESAVKNHWNGVVIYGCVRDVDAIAELDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + + GG I+ G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDITLYFGGVTITSGDYIYADNNGIVIAKEKL 167
>gi|384250699|gb|EIE24178.1| regulator of ribonuclease activity, partial [Coccomyxa
subellipsoidea C-169]
Length = 136
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 97/134 (72%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG FSG + T+K FE+N L+R+ LEE G GRVL VDGGGSLRCA+LG N A N
Sbjct: 3 YGGNIRFSGQVTTIKCFENNPLVRKALEEGGEGRVLAVDGGGSLRCALLGDNIAEMAYKN 62
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
GW+GI++NGCIRD ++I +GV+AL ++P+K++K+ G +VP+T G +IS G++LY
Sbjct: 63 GWSGILINGCIRDSEDIGKMPLGVKALNTYPLKSSKRDHGLTNVPLTFAGVQISPGDYLY 122
Query: 152 ADTDGILISRAELS 165
AD DG+L+S EL
Sbjct: 123 ADKDGVLVSPKELK 136
>gi|418529806|ref|ZP_13095734.1| ribonuclease activity regulator protein RraA [Comamonas
testosteroni ATCC 11996]
gi|371453083|gb|EHN66107.1| ribonuclease activity regulator protein RraA [Comamonas
testosteroni ATCC 11996]
Length = 171
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T ++CDA+ S + R L P+F YG + F G + T++ +DN L+R L E G G
Sbjct: 11 STCDLCDAHIS-DDSSDFRVLPPVFHSYGGQVSFMGEVSTVQCLDDNSLVRAALAEPGGG 69
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A++GGN A NGWAG++V GC+RDV E+ +G+ ALA +PM
Sbjct: 70 RVLVVDGGGSLRRALVGGNVAASAAQNGWAGVLVYGCVRDVAELKSTPVGLYALALNPMP 129
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G + V + I G + G+WLYAD DGI++SR L
Sbjct: 130 TVKQGQGLRDVYVQIAGLWVRPGDWLYADADGIVLSRRNL 169
>gi|88800595|ref|ZP_01116156.1| ribonuclease activity regulator protein RraA [Reinekea blandensis
MED297]
gi|88776650|gb|EAR07864.1| ribonuclease activity regulator protein RraA [Reinekea sp. MED297]
Length = 165
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD P ++ L P++Q +G + FSG + T+K FEDN ++E L G+GR
Sbjct: 4 TPDICDDYPT-----QVTPLAPLYQNFGGVKAFSGEVETVKCFEDNSRVKELLSTPGHGR 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG SLRCA++G A NGW+GIV+ GC RDV E+ GVRALAS P+K+
Sbjct: 59 VLVVDGGASLRCALIGDLIAASAIENGWSGIVIRGCCRDVHELQTMPFGVRALASIPLKS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+KG GE V I + G + G WLYAD G+LIS L +
Sbjct: 119 TRKGAGESGVTIDMDGVEVRPGMWLYADETGMLISDESLPI 159
>gi|383935898|ref|ZP_09989330.1| regulator of ribonuclease activity A [Rheinheimera nanhaiensis
E407-8]
gi|383702980|dbj|GAB59421.1| regulator of ribonuclease activity A [Rheinheimera nanhaiensis
E407-8]
Length = 161
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 104/166 (62%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA+ I R +PIF YG + F G IVT+K FEDN +++ +
Sbjct: 1 MPHFTLPDLCDAHADCI-----RVAEPIFHNYGGKAAFGGQIVTVKCFEDNSKVKQLVAT 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGS R A+LG QA NGW GI++NGCIRD+DEI +GV+AL
Sbjct: 56 PGQGKVLVVDGGGSKRHALLGDMLAEQAAQNGWEGIIINGCIRDIDEIRQTPLGVQALGI 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+ +G+ +V +T G G+++YAD +G+L++ L V
Sbjct: 116 HPMKTDKRDLGDINVTVTFAGVDFIPGQFVYADNNGVLVATKPLVV 161
>gi|428163276|gb|EKX32355.1| hypothetical protein GUITHDRAFT_98616 [Guillardia theta CCMP2712]
Length = 217
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 108/165 (65%), Gaps = 6/165 (3%)
Query: 1 MALVTTAEVCDAN----PQLIVSGELRALQPI--FQIYGRRQVFSGPIVTLKVFEDNVLI 54
++ TA++CD+ ++ ++ + P F+ +G + F G IVT+K +E N L+
Sbjct: 47 LSSFATADICDSYGLDVSKISSDHGVKVIDPSLNFKNFGGQSEFCGSIVTIKAYESNPLV 106
Query: 55 REFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIG 114
R L+E GNGRVLVVD GGS RCA+LGGN + NGWAGIVV GCIRD EI+ IG
Sbjct: 107 RATLQEDGNGRVLVVDAGGSTRCAMLGGNLAEIGEKNGWAGIVVYGCIRDSKEISNICIG 166
Query: 115 VRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
V+AL +HP+K++K G + VP+ GG I G+++Y+D+DGILI
Sbjct: 167 VKALNTHPVKSHKDEKGVRDVPLHFGGVTIRPGDYMYSDSDGILI 211
>gi|381151614|ref|ZP_09863483.1| RraA family protein [Methylomicrobium album BG8]
gi|380883586|gb|EIC29463.1| RraA family protein [Methylomicrobium album BG8]
Length = 179
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
TTA +CDA+ + +P+F+ YG + +F G I TLKVFED+ I+ L+EK
Sbjct: 21 FTTARLCDAHAHDM---HFHIAEPLFKPYGAKPIFRGRITTLKVFEDHGQIKTILQEKAE 77
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS RCA++ A NGW G+VV GC+RD E+ IG+RAL +HP+
Sbjct: 78 GRVLVVDGGGSHRCALIDAELAKLAVANGWQGLVVYGCVRDTAELIELPIGIRALHAHPL 137
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
++++K G++ +P+ G ++YAD DGI++S LS
Sbjct: 138 QSHQKNFGDRDLPVFFAGVHFKKDHFIYADHDGIVVSDKMLS 179
>gi|381189076|ref|ZP_09896632.1| ribonuclease E inhibitor RraA [Flavobacterium frigoris PS1]
gi|379648909|gb|EIA07488.1| ribonuclease E inhibitor RraA [Flavobacterium frigoris PS1]
Length = 159
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 106/162 (65%), Gaps = 5/162 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ TTA++ D + L L + PIF +G +++FSG I T+K+FEDN L+R+ LE G
Sbjct: 1 MFTTADLWDEHETL-----LSCVDPIFNHFGNKKMFSGKITTIKLFEDNSLVRKQLESDG 55
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
+VLV+DGG SLRCA++G A N W GI+VNGCIRD IN +IG++AL + P
Sbjct: 56 KDKVLVIDGGASLRCALIGDQLAALAIQNNWEGIIVNGCIRDSYVINPMNIGIKALNTSP 115
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+ K+ +GE ++P+ GG +++YAD DGIL+S+ L
Sbjct: 116 VKSVKRNLGEINIPVKFGGITFIPEDYIYADGDGILVSKNNL 157
>gi|381196431|ref|ZP_09903773.1| ribonuclease activity regulator protein RraA [Acinetobacter lwoffii
WJ10621]
Length = 170
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 109/171 (63%), Gaps = 13/171 (7%)
Query: 3 LVTTA----EVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVL 53
+VTTA ++ D +P+L +L+ + P F+ YG R+ F G +VT+K FEDN
Sbjct: 1 MVTTAFVTCDLLDDHPEL----DLQVVSPSMDGKFFRSYGARKTFGGQVVTVKCFEDNSR 56
Query: 54 IREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDI 113
++E L G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD I D+
Sbjct: 57 VKELLATDGTGKVLVVDGGASMRCALMGDLIAESAVKNHWNGVVIYGCVRDVDAIAELDL 116
Query: 114 GVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
GV ALA+ P K+N+KG+GE + + GG I G +LYAD +GI+I++ +L
Sbjct: 117 GVHALAAIPQKSNRKGVGEVDISLYFGGVTIQSGHYLYADNNGIVIAKEKL 167
>gi|53804098|ref|YP_114251.1| ribonuclease activity regulator protein RraA [Methylococcus
capsulatus str. Bath]
gi|61215840|sp|Q607E7.1|RRAAH_METCA RecName: Full=Putative regulator of ribonuclease activity
gi|53757859|gb|AAU92150.1| putative s-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Methylococcus capsulatus str. Bath]
Length = 161
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA +CD Q + L+ ++P+F+ +G F G I TLKVFED+VLIRE L ++ +G
Sbjct: 4 TTAGLCD---QFHGTHPLQIVEPLFRPFGAVSRFHGRITTLKVFEDSVLIRETLAQEVDG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLV+DGG S RCA+LGGN A +NGW GI+V GC+RD E+ IG+RAL +HP+
Sbjct: 61 RVLVIDGGASHRCALLGGNLARLAADNGWQGIIVYGCVRDSVELGTVPIGIRALHTHPLD 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++K+G G++ IT +LYAD DGI++S +L
Sbjct: 121 SHKRGGGDRDCLITFASVNFRTDHYLYADEDGIVVSEEKL 160
>gi|421855948|ref|ZP_16288320.1| ribonuclease activity regulator protein RraA [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|403188631|dbj|GAB74521.1| ribonuclease activity regulator protein RraA [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 169
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP EL+ + P F+ YG R+ F G +VT+K FEDN ++E L
Sbjct: 7 TCDLLDNNPD----KELQVMCPSIDGKYFKSYGLRKTFGGQVVTVKCFEDNSRVKELLAT 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+++ GCIRDVD I D+GV ALA+
Sbjct: 63 DGTGKVLVVDGGASMRCALMGDMIAESAVKNHWNGVIIYGCIRDVDAIAELDLGVHALAA 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE V + GG I G+++YAD +GI+IS+ +L
Sbjct: 123 IPQKSNRKGIGEVDVTLYFGGVTIHAGDYIYADNNGIVISKEKL 166
>gi|94984494|ref|YP_603858.1| ribonuclease activity regulator protein RraA [Deinococcus
geothermalis DSM 11300]
gi|94554775|gb|ABF44689.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase, RraA
[Deinococcus geothermalis DSM 11300]
Length = 167
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 105/161 (65%), Gaps = 6/161 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
TA++ D +P+ +V L P+ + YG F G T++V +DNVL+R LEE G
Sbjct: 12 FTPTADLSDVHPEALV------LAPLLRDYGGTPRFQGLAATVRVQDDNVLVRTALEEPG 65
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVD GGSL CA+LGG A NGWAG+VVNGC+RDV E+ +G+RA+A+HP
Sbjct: 66 EGRVLVVDNGGSLNCAVLGGMLGQIAVQNGWAGVVVNGCVRDVAELARLPLGIRAIAAHP 125
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
++ K+ +GE+ VP+T G + G+ +YAD DG+L+ A+
Sbjct: 126 RRSAKRSLGERDVPVTFAGVTLHPGDDVYADEDGLLLLPAQ 166
>gi|126641664|ref|YP_001084648.1| ribonuclease activity regulator protein RraA [Acinetobacter
baumannii ATCC 17978]
gi|407932679|ref|YP_006848322.1| RraA family protein [Acinetobacter baumannii TYTH-1]
gi|407901260|gb|AFU38091.1| RraA family protein [Acinetobacter baumannii TYTH-1]
Length = 142
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 94/138 (68%)
Query: 27 PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVV 86
F+ YG RQ F G +VT+K FEDN ++E L G G+VLVVDGG S+RCA++G
Sbjct: 4 KFFKSYGARQTFGGQVVTVKCFEDNSRVKELLATDGTGKVLVVDGGASMRCALMGDMIAE 63
Query: 87 QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISD 146
A N W G+V+ GC+RDVD + D+GV ALA+ P K+N+KGIGE +P+ GG I
Sbjct: 64 SAVKNNWNGVVIYGCVRDVDALATLDLGVHALAAIPQKSNRKGIGEVDIPLYFGGVTIQS 123
Query: 147 GEWLYADTDGILISRAEL 164
G+++YAD +GI+I++ +L
Sbjct: 124 GDFIYADNNGIVIAKEKL 141
>gi|264679169|ref|YP_003279076.1| regulator of ribonuclease activity A [Comamonas testosteroni CNB-2]
gi|262209682|gb|ACY33780.1| regulator of ribonuclease activity A [Comamonas testosteroni CNB-2]
Length = 171
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T ++CDA+ S + R L P+F YG F G + T++ +DN L+R L E G G
Sbjct: 11 STCDLCDAHIS-DDSSDFRVLPPVFHSYGGNVGFMGEVSTVQCLDDNSLVRAALAEPGGG 69
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A++GGN A NGWAG++V GC+RDV E+ +G+ ALA +PM
Sbjct: 70 RVLVVDGGGSLRRALVGGNVATSAAQNGWAGVLVYGCVRDVAELKSTPVGLYALALNPMP 129
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G + V + I G I G+WLYAD DGI++SR L
Sbjct: 130 TVKQGQGLRDVYVQIAGLWIRPGDWLYADADGIVLSRRNL 169
>gi|226356950|ref|YP_002786690.1| ribonuclease activity regulator protein RraA [Deinococcus deserti
VCD115]
gi|226318940|gb|ACO46936.1| putative regulator of ribonuclease activity A, putative
demethylmenaquinone methyltransferase [Deinococcus
deserti VCD115]
Length = 152
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 105/156 (67%), Gaps = 6/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+++ DA P+ +V L P+F YG + FSG + TL+V E+N L+R+ LE G
Sbjct: 1 MPTSDLSDAFPEAVV------LPPVFNDYGGQIRFSGTVQTLRVHENNPLVRQTLETSGE 54
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSL CA+LGG A ++GWAG+V++GC+RDV E+ G G+RALA+HP
Sbjct: 55 GRVLVVDGGGSLNCALLGGQLGQLAVDHGWAGVVIHGCVRDVAELRGLPAGIRALAAHPR 114
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
++ K +GE VPI G R+ G L+AD DGI++
Sbjct: 115 RSGKVPLGEVGVPIEFAGVRVHPGMTLHADEDGIVL 150
>gi|262370245|ref|ZP_06063571.1| S-adenosylmethionine2-demethylmenaquinone methyltransferase
[Acinetobacter johnsonii SH046]
gi|262314587|gb|EEY95628.1| S-adenosylmethionine2-demethylmenaquinone methyltransferase
[Acinetobacter johnsonii SH046]
Length = 169
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D +P+L +L+ + P F YG R+ F G +VT+K FEDN ++E L
Sbjct: 7 TCDLLDDHPEL----DLQVVSPSMDGKFFNSYGARKTFGGQVVTVKCFEDNSRVKELLAT 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD I D+GV ALA+
Sbjct: 63 DGTGKVLVVDGGASMRCALMGDLIAESAVKNHWNGVVIYGCVRDVDAIAELDLGVHALAA 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KG+GE + + GG I G +LYAD +GI+I++ +L
Sbjct: 123 IPQKSNRKGVGEVDISLHFGGVTIQSGHYLYADNNGIVIAKEKL 166
>gi|303286607|ref|XP_003062593.1| methyltransferase [Micromonas pusilla CCMP1545]
gi|226456110|gb|EEH53412.1| methyltransferase [Micromonas pusilla CCMP1545]
Length = 245
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 15 QLIVSGELRALQP-IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGG 73
+I + +LR + F+ +G + F+G T++ E+N L+R L E G+GRVLVVDGGG
Sbjct: 93 DVIATRKLRVMTAGYFKDFGGLKKFAGRASTIRCHENNPLVRAALNEPGDGRVLVVDGGG 152
Query: 74 SLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEK 133
S RCA++G N A NGW+G+VVNGC+RDVD++ C +GV+A+A+HP+ ++K+ G +
Sbjct: 153 STRCALMGDNLAALAAKNGWSGVVVNGCVRDVDDVGRCRVGVKAIAAHPVPSSKRDPGLR 212
Query: 134 HVPITIGGTRISDGEWLYADTDGILISRAELSV 166
V ++ G +S G+W+YAD+DG+++S EL++
Sbjct: 213 DVDVSFAGVTVSPGDWIYADSDGVVVSGEELTL 245
>gi|406036313|ref|ZP_11043677.1| ribonuclease activity regulator protein RraA [Acinetobacter parvus
DSM 16617 = CIP 108168]
Length = 170
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG R+ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVTPSLDGKFFKSYGARKTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD I D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDLIAESAVKNHWNGVVIYGCVRDVDAIAELDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + + GG IS G+++YAD +GI+I + +L
Sbjct: 124 IPQKSNRKGIGEVDITLYFGGVTISSGDYIYADNNGIVIVKEKL 167
>gi|365089913|ref|ZP_09328421.1| ribonuclease activity regulator protein RraA [Acidovorax sp. NO-1]
gi|363416606|gb|EHL23710.1| ribonuclease activity regulator protein RraA [Acidovorax sp. NO-1]
Length = 171
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T + CD + + +SG R L P+F YG F+GP+ T+K EDN ++ +E G GR
Sbjct: 12 TCDFCDVH-KGDMSGAFRVLPPVFHSYGGVAAFAGPVSTVKCHEDNTQVKAAVESPGAGR 70
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A++GGN A NGWAG+VV+GC+RDV E+ +G+ ALA P+
Sbjct: 71 VLVVDGGGSLRRALVGGNLAAAAARNGWAGVVVDGCVRDVAELKAAAVGLCALALMPLPT 130
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++G G++ V + I G + G+WLYAD DGI++S L V
Sbjct: 131 ERRGEGQRDVAVQIQGVWVRPGDWLYADADGIVVSAQPLVV 171
>gi|329890681|ref|ZP_08269024.1| regulator of ribonuclease activity A [Brevundimonas diminuta ATCC
11568]
gi|328845982|gb|EGF95546.1| regulator of ribonuclease activity A [Brevundimonas diminuta ATCC
11568]
Length = 160
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 105/159 (66%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDA+ S E++ Q F+ +G+ F GPI TL V +DN L+R+ LE G G
Sbjct: 5 TADLCDAH-----SEEVKVCQTHFRSFGQVAAFHGPIRTLSVLDDNTLVRQTLERPGQGA 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVV+GGGSL+ A++G N A +NGWAGIVV+G +RD IN ++GV+AL + PM+A
Sbjct: 60 VLVVNGGGSLKRALVGDNLAKLAIDNGWAGIVVHGAVRDTAVINTMNVGVKALGTIPMRA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++ IGE +P GG + G+WLYAD DG+++S L
Sbjct: 120 DRDAIGEIDIPTAFGGVIFTPGDWLYADEDGLIVSPHRL 158
>gi|262372274|ref|ZP_06065553.1| S-adenosylmethionine2-demethylmenaquinone methyltransferase
[Acinetobacter junii SH205]
gi|262312299|gb|EEY93384.1| S-adenosylmethionine2-demethylmenaquinone methyltransferase
[Acinetobacter junii SH205]
Length = 170
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP EL+ + P F+ YG R+ F G IVT+K +EDN ++E L
Sbjct: 8 TCDLLDDNPD----KELQVVTPCMDGKFFKSYGARKTFGGQIVTVKCYEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD I D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDLIADSAVKNHWNGVVIYGCVRDVDAIAELDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + + GG I+ G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDITLYFGGVTINSGDYIYADNNGIVIAKEKL 167
>gi|255318944|ref|ZP_05360169.1| regulator of ribonuclease activity A [Acinetobacter radioresistens
SK82]
gi|262378320|ref|ZP_06071477.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303961|gb|EET83153.1| regulator of ribonuclease activity A [Acinetobacter radioresistens
SK82]
gi|262299605|gb|EEY87517.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 169
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP EL+ + P F+ YG R+ F G +VT+K FEDN ++E L
Sbjct: 7 TCDLLDDNPD----KELQVMCPSIDGKYFKSYGLRKTFGGQVVTVKCFEDNSRVKELLAT 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+++ GC+RDVD I D+GV ALA+
Sbjct: 63 DGTGKVLVVDGGASMRCALMGDMIAESAVKNHWNGVIIYGCVRDVDAIAELDLGVHALAA 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + + GG I G+++YAD +GI+IS+ +L
Sbjct: 123 IPQKSNRKGIGEVDITLYFGGVTIHAGDYIYADNNGIVISKEKL 166
>gi|425743829|ref|ZP_18861897.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-323]
gi|425492693|gb|EKU58946.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-323]
Length = 170
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ EL+ + P F+ YG R+ F G +V +K FEDN ++E L
Sbjct: 8 TCDLVDDNPE----KELQVVTPSLDGKFFKSYGARKTFGGQVVAVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G+G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGSGKVLVVDGGASMRCALMGDMIAESAVKNHWNGVVIYGCVRDVDALAELDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE V + GG I+ G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDVSLYFGGVTINSGDYIYADNNGIVIAKEKL 167
>gi|333984329|ref|YP_004513539.1| Regulator of ribonuclease activity A [Methylomonas methanica MC09]
gi|333808370|gb|AEG01040.1| Regulator of ribonuclease activity A [Methylomonas methanica MC09]
Length = 161
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ TTAE+CD + + +P+ + +G + FSG I TLKVFEDN L+R LEE G
Sbjct: 2 VATTAELCDRFSE---QENFQIAEPVLRHFGGKCRFSGLITTLKVFEDNSLVRNTLEENG 58
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGGS RCA+LG A N W GIVV GC+R D +N IGV AL +HP
Sbjct: 59 QGRVLVIDGGGSRRCALLGDTLTALALKNAWEGIVVYGCVRSADLLNKMPIGVMALNTHP 118
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++++K G G++ IT G ++YAD DGI+++ +L
Sbjct: 119 LRSHKHGHGDRDKLITFAGINFKKDHYIYADNDGIIVADTKL 160
>gi|421464076|ref|ZP_15912769.1| regulator of ribonuclease activity A [Acinetobacter radioresistens
WC-A-157]
gi|400206450|gb|EJO37427.1| regulator of ribonuclease activity A [Acinetobacter radioresistens
WC-A-157]
Length = 169
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP EL+ + P F+ YG R+ F G +VT+K FEDN ++E L
Sbjct: 7 TCDLLDNNPD----KELQVMCPSIDGKYFKSYGLRKTFGGQVVTVKCFEDNSRVKELLAT 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+++ GCIRDVD I D+G+ ALA+
Sbjct: 63 DGMGKVLVVDGGASMRCALMGDMIAESAVKNHWNGVIIYGCIRDVDAIAELDLGIHALAA 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE V + GG I G+++YAD +GI+IS+ +L
Sbjct: 123 IPQKSNRKGIGEVDVTLYFGGVTIHAGDYIYADNNGIVISKEKL 166
>gi|89900740|ref|YP_523211.1| ribonuclease activity regulator protein RraA [Rhodoferax
ferrireducens T118]
gi|122479283|sp|Q21X23.1|RRAAH_RHOFD RecName: Full=Putative regulator of ribonuclease activity
gi|89345477|gb|ABD69680.1| Protein of unknown function 1935 [Rhodoferax ferrireducens T118]
Length = 173
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 107/168 (63%), Gaps = 9/168 (5%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN- 63
T ++CDA+ VSG R L P+F+ +G + F GP+VT+K FEDN ++ +E G
Sbjct: 6 ATCDLCDAHKN-DVSGAFRVLPPVFRDFGGVRQFCGPVVTVKCFEDNSSVKAAVESVGYQ 64
Query: 64 -------GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVR 116
G+VLVVDGGGSLR A+LGGN A NGWAG+V++GC+RDV E+ +G+R
Sbjct: 65 ETPAGRVGKVLVVDGGGSLRRALLGGNLGAAAARNGWAGVVIDGCVRDVSELAAVGLGIR 124
Query: 117 ALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
ALAS P+ K+G G+ + + I G + G+WLYAD DG++++ L
Sbjct: 125 ALASMPLPTEKRGEGQSDLALQIQGVWVRPGDWLYADEDGMVLAAGRL 172
>gi|124266754|ref|YP_001020758.1| ribonuclease activity regulator protein RraA [Methylibium
petroleiphilum PM1]
gi|124259529|gb|ABM94523.1| regulator of ribonuclease activity A [Methylibium petroleiphilum
PM1]
Length = 168
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD + G R L P+F YG F+GP+ T+K FEDN L++ L+E G GRVL
Sbjct: 12 DLCDEHKN-DTDGAFRVLPPVFHSYGGVAKFAGPVSTVKCFEDNSLVKLALDEPGQGRVL 70
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
VVDGGGSLR A++GGN A NGWAG++VNGC+RD E+ +G+RALA P+ K
Sbjct: 71 VVDGGGSLRRALVGGNIGAAAAKNGWAGVLVNGCVRDAAELAASAVGIRALALMPLPTEK 130
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+ G++ V + + G + G+WLYAD DG+++
Sbjct: 131 RNEGQRDVAVQVQGVWVRVGDWLYADEDGVVV 162
>gi|390952197|ref|YP_006415956.1| RraA family protein [Thiocystis violascens DSM 198]
gi|390428766|gb|AFL75831.1| RraA family protein [Thiocystis violascens DSM 198]
Length = 159
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 97/143 (67%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
LR +PIF+ +G R +G IVT+K FEDN L++ L E G GRVLVVD GGSLRCA+LG
Sbjct: 16 LRVCEPIFRDFGGRSRSAGAIVTVKCFEDNSLVKSTLAEPGEGRVLVVDAGGSLRCAMLG 75
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
A GWAG+++ GC+RD E+ G +G++ALA+ P K+ ++G G++ +P+T G
Sbjct: 76 DLIAASAVEQGWAGVILFGCVRDSRELAGMPLGIKALAAIPRKSQRRGEGQRDLPVTFAG 135
Query: 142 TRISDGEWLYADTDGILISRAEL 164
R + G+W+Y D DGI+++ L
Sbjct: 136 ARFAPGDWIYCDEDGIVVADQPL 158
>gi|299533553|ref|ZP_07046929.1| ribonuclease activity regulator protein RraA [Comamonas
testosteroni S44]
gi|298718459|gb|EFI59440.1| ribonuclease activity regulator protein RraA [Comamonas
testosteroni S44]
Length = 171
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T ++CDA+ S + R L P+F YG F G + T++ +DN L+R L E G G
Sbjct: 11 STCDLCDAHIS-DDSSDFRVLPPVFHSYGGNVGFMGEVSTVQCLDDNSLVRAALAEPGGG 69
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGSLR A++GGN A NGWAG++V GC+RDV E+ +G+ ALA +PM
Sbjct: 70 RVLVVDGGGSLRRALVGGNVATSAAQNGWAGVLVYGCVRDVAELKSTSVGLYALALNPMP 129
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G + V + I G I G+WLYAD +GI++SR L
Sbjct: 130 TVKQGQGLRDVYVQIAGLWIRPGDWLYADANGIVLSRRNL 169
>gi|293608216|ref|ZP_06690519.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375134608|ref|YP_004995258.1| ribonuclease activity A regulator [Acinetobacter calcoaceticus
PHEA-2]
gi|427424593|ref|ZP_18914713.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-136]
gi|292828789|gb|EFF87151.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122053|gb|ADY81576.1| regulator of ribonuclease activity A [Acinetobacter calcoaceticus
PHEA-2]
gi|425698600|gb|EKU68236.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-136]
Length = 168
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P FQ YG R+ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVIPSMDGKFFQSYGARKTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDLIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + + GG I G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDINLYFGGVTIQSGDFIYADNNGIVIAKEKL 167
>gi|288553897|ref|YP_003425832.1| ribonuclease activity regulator protein RraA [Bacillus pseudofirmus
OF4]
gi|288545057|gb|ADC48940.1| ribonuclease activity regulator protein RraA [Bacillus pseudofirmus
OF4]
Length = 159
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 104/161 (64%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD + +++ PIF+++G+R+ F GP+ T+KV+EDNVL+++ L+
Sbjct: 3 IITADLCDEFRE-----KVKIADPIFKMFGKRKSFYGPVHTVKVYEDNVLVKKALQTIPE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDGGGS RCA+LG N A GI+V GCIRD EIN DIGVRA+A+HP+
Sbjct: 58 GSVLVVDGGGSTRCALLGDNLADIAVTRKLPGIIVYGCIRDSAEINQMDIGVRAIATHPL 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K+G G + V + G G ++Y D DGIL+S L
Sbjct: 118 KSIKQGKGLEQVAVQFAGINFEPGAYVYVDEDGILVSEQPL 158
>gi|320333149|ref|YP_004169860.1| Regulator of ribonuclease activity A [Deinococcus maricopensis DSM
21211]
gi|319754438|gb|ADV66195.1| Regulator of ribonuclease activity A [Deinococcus maricopensis DSM
21211]
Length = 164
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 6/163 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
A T ++ DA+ + ++ +P+++ +G R F G T++V EDNVL+R L
Sbjct: 4 ATYATTDLSDAHTDVHIA------EPVWRSFGGRAAFHGRARTVQVHEDNVLVRAELATP 57
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G GRVLVVDGGGSLRCA+LG A NGWAG+VV GC+RD + D+GV ALA H
Sbjct: 58 GEGRVLVVDGGGSLRCALLGDMLGELAVRNGWAGVVVYGCVRDTRALGTLDLGVLALAPH 117
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P ++ K G GE VP+T G + DG+ +YAD DG+LIS A L
Sbjct: 118 PRRSGKLGAGEAGVPVTFAGVTVQDGDHVYADEDGLLISSAPL 160
>gi|121997268|ref|YP_001002055.1| ribonuclease activity regulator protein RraA [Halorhodospira
halophila SL1]
gi|166230386|sp|A1WU91.1|RRAAH_HALHL RecName: Full=Putative regulator of ribonuclease activity
gi|121588673|gb|ABM61253.1| regulator of ribonuclease activity A [Halorhodospira halophila SL1]
Length = 164
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MAL+TT ++CDA +LRA+ P+ YG R F GP+ TLK+FEDNV +RE L
Sbjct: 1 MALLTT-DLCDAYAD-EPGAQLRAMNPMLIGYGGRARFGGPVTTLKLFEDNVRVRELLSA 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G+G VLVVDGGGS+RCA+LG + NGW+G ++ GC+RD E+ D GV+AL +
Sbjct: 59 PGDGGVLVVDGGGSMRCALLGDRLAELGRENGWSGAIIYGCVRDSAELAQIDFGVQALNT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+K+ KKG+GE+ V +T G I G+WLYAD DG++++ EL++
Sbjct: 119 HPLKSQKKGLGERDVSVTFAGVTIQSGDWLYADEDGVVVASRELTL 164
>gi|344345336|ref|ZP_08776189.1| Regulator of ribonuclease activity A [Marichromatium purpuratum
984]
gi|343803057|gb|EGV20970.1| Regulator of ribonuclease activity A [Marichromatium purpuratum
984]
Length = 161
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 98/144 (68%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
L+ P+FQ +G FSG VT+K FEDN L++ L E G GRVLVVD GGSLRCA+LG
Sbjct: 16 LQVCDPVFQDFGGHSRFSGEAVTVKCFEDNSLVKSTLAEPGEGRVLVVDAGGSLRCAMLG 75
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
+A GWAG+V++GC+RD E+ IG++ALAS P K++++G G++ +PI I G
Sbjct: 76 DLIAARAVEQGWAGVVIHGCVRDRVELAAMAIGIKALASTPRKSHRRGEGQRDIPIHIAG 135
Query: 142 TRISDGEWLYADTDGILISRAELS 165
R++ G+ +Y D DG++I+ L+
Sbjct: 136 ARVNPGDHIYCDEDGVVIAERSLT 159
>gi|188990921|ref|YP_001902931.1| ribonuclease activity regulator protein RraA [Xanthomonas
campestris pv. campestris str. B100]
gi|226703243|sp|B0RQZ0.1|RRAAH_XANCB RecName: Full=Putative regulator of ribonuclease activity
gi|167732681|emb|CAP50875.1| Regulator of ribonuclease activity A [Xanthomonas campestris pv.
campestris]
Length = 166
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ V+ +P+F+ +G R FSGPI T++ EDN IRE G+G
Sbjct: 4 TTPDLCDRFPEVAVA------EPLFRHFGGRTTFSGPIATVRCVEDNSRIRELASTPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSLR A+ G QA NGWAG++++GC+RDV+ + G +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLRHALFGDQIGAQAVANGWAGVLIHGCVRDVEILAGLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G++++ A LS+
Sbjct: 118 TERRDLGDVDVPVNFAGVAFVPGHWLYADANGVVVAAAPLSL 159
>gi|424740875|ref|ZP_18169240.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-141]
gi|422945221|gb|EKU40183.1| regulator of ribonuclease activity A [Acinetobacter baumannii
WC-141]
Length = 168
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 103/164 (62%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P FQ YG R+ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVIPSMDGKFFQSYGARKTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G +VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTEKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + GG I G+++YAD +GI+IS+ +L
Sbjct: 124 IPQKSNRKGIGEVDTTLYFGGVTIQSGDFIYADNNGIVISKEKL 167
>gi|83945186|ref|ZP_00957535.1| ribonuclease activity regulator protein RraA [Oceanicaulis sp.
HTCC2633]
gi|83851356|gb|EAP89212.1| ribonuclease activity regulator protein RraA [Oceanicaulis sp.
HTCC2633]
Length = 161
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 107/164 (65%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ ++CDA P+ +++ L+P+ + YG F G + T++ EDN +RE + E G
Sbjct: 1 MTPVCDLCDAFPE-----QVQVLEPVLKSYGGEAAFYGQVETIRTHEDNSRVREAVSEPG 55
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
+GRVLVVDGGGSL+ ++LGG+ +A NGWAG++VNG +RDV E+ +GV ALA P
Sbjct: 56 SGRVLVVDGGGSLKRSLLGGDLAGKAAANGWAGVIVNGAVRDVAELEAEALGVLALALIP 115
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
MK K+ +G + VP+T+ G + G+W+YAD DG+++S L +
Sbjct: 116 MKTEKRDLGVRGVPVTLAGAVVRRGDWIYADRDGVIVSAEPLHL 159
>gi|325920716|ref|ZP_08182622.1| RraA family protein [Xanthomonas gardneri ATCC 19865]
gi|325548768|gb|EGD19716.1| RraA family protein [Xanthomonas gardneri ATCC 19865]
Length = 166
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ V+ +P+F+ +G R FSGPI T++ FEDN +RE G+G
Sbjct: 4 TTPDLCDRFPEVHVA------EPLFRHFGGRAAFSGPIATVRCFEDNSRVRELAATPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG QA NGWAG++++GC+RDV+ + +GV AL + P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAAQAVANGWAGVLIHGCVRDVEILATLPLGVLALGACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +GE VP+ G G WLYAD +G+L++ LS+
Sbjct: 118 TERRDLGEVEVPVNFAGVAFVPGHWLYADANGVLVAALPLSL 159
>gi|156360037|ref|XP_001625068.1| predicted protein [Nematostella vectensis]
gi|156211882|gb|EDO32968.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 104/161 (64%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++ DA + L+ +PIF+ YG R+ F G I T+K EDNVL++ L E G+
Sbjct: 3 LKTADLSDAYNDI-----LQYAEPIFRDYGGRKTFGGRITTVKCHEDNVLVKTALSEPGD 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
RVLVVD GGSLR +LG N A NGW+GI++ GCIRD ++I D+GV+AL + P+
Sbjct: 58 SRVLVVDAGGSLRRGMLGDNLAEMASKNGWSGIIMYGCIRDSEDIAKIDVGVKALGTMPL 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KKG G++ + + G G++LYAD DGI++S EL
Sbjct: 118 KSIKKGQGDRDIIVKFAGATFRPGDYLYADVDGIVVSPKEL 158
>gi|429769103|ref|ZP_19301225.1| RraA family protein [Brevundimonas diminuta 470-4]
gi|429187903|gb|EKY28802.1| RraA family protein [Brevundimonas diminuta 470-4]
Length = 160
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 105/159 (66%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDAN ++ + Q F+ +G+ F GPI TL V +DN L+R+ LE G G
Sbjct: 5 TADLCDANADVV-----KVCQTPFRSFGKVAAFHGPIRTLSVLDDNALVRQTLERPGQGA 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVV+GGGSL+ A++G N A +N WAG+VV+G +RDV IN ++GV+AL + P++A
Sbjct: 60 VLVVNGGGSLKRALVGDNLAKLALDNSWAGVVVHGAVRDVAVINTMNVGVKALGTVPLRA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++ IGE +P GG + G+WLYAD DG+++S+ L
Sbjct: 120 DRDVIGEIDIPTAFGGVIFTPGDWLYADEDGLIVSQHRL 158
>gi|384428610|ref|YP_005637970.1| ribonuclease activity A regulator [Xanthomonas campestris pv.
raphani 756C]
gi|341937713|gb|AEL07852.1| regulator of ribonuclease activity A [Xanthomonas campestris pv.
raphani 756C]
Length = 166
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ V+ +P+F+ +G R FSGPI T++ EDN IRE G+G
Sbjct: 4 TTPDLCDRFPEVAVA------EPLFRHFGGRTTFSGPIATVRCVEDNSRIRELASTPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSLR A+ G QA NGWAG++++GC+RDV+ + G +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLRHALFGDQIGAQAVANGWAGVLIHGCVRDVEILAGLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G++++ A LS+
Sbjct: 118 TERRDLGDVDVPLNFAGVAFVPGHWLYADANGVVLAAAPLSL 159
>gi|319653433|ref|ZP_08007533.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Bacillus sp. 2_A_57_CT2]
gi|317394917|gb|EFV75655.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Bacillus sp. 2_A_57_CT2]
Length = 159
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 106/159 (66%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD + S EL Q F+ YG+++ FSGPI T++VFEDNVL+ E LE G
Sbjct: 5 TADLCDDH-----SKELLICQQEFKSYGQKRKFSGPISTVRVFEDNVLVVEALESIPEGS 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA++G AQ+ AG+++ GC+RD E+ D G+ AL S+P+K+
Sbjct: 60 VLVVDGGGSKRCALMGDRLGEIAQSRKLAGVIIYGCVRDTVELGSLDTGILALGSNPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G++++P+T GG GE++YAD DG+++S L
Sbjct: 120 RKEGKGDRNIPVTFGGIDWKPGEYVYADEDGVIVSSKAL 158
>gi|226953068|ref|ZP_03823532.1| regulator of ribonuclease activity [Acinetobacter sp. ATCC 27244]
gi|294650657|ref|ZP_06728011.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Acinetobacter haemolyticus ATCC 19194]
gi|226836160|gb|EEH68543.1| regulator of ribonuclease activity [Acinetobacter sp. ATCC 27244]
gi|292823448|gb|EFF82297.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Acinetobacter haemolyticus ATCC 19194]
Length = 170
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 6 TAEVCDANPQLIVSGELRALQ-PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++ D NP+ + + +L F+ YG R+ F G +VT+K FEDN ++E L +G G
Sbjct: 8 TCDLLDDNPEKNLQVVIPSLDGKFFKSYGARKSFGGEVVTVKCFEDNSRVKELLATEGTG 67
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+ P K
Sbjct: 68 KVLVVDGGASMRCALMGDMIAESAVKNKWNGVVIYGCVRDVDALAELDLGVHALAAIPQK 127
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+N+KGIGE + GG I+ G+++YAD +GI+I++ +L
Sbjct: 128 SNRKGIGEVDSTLYFGGVTINSGDYIYADNNGIVIAKEKL 167
>gi|358011914|ref|ZP_09143724.1| ribonuclease activity regulator protein RraA [Acinetobacter sp.
P8-3-8]
Length = 170
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
Query: 6 TAEVCDANPQLIVSGELRALQ-PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++ D NP+ + + ++ F+ YG R+ F G IVT+K FEDN ++E L G G
Sbjct: 8 TCDLLDDNPEKDIQTLIPSMDGKFFRSYGARKTFGGQIVTVKCFEDNSRVKELLATDGAG 67
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+ P K
Sbjct: 68 KVLVVDGGASMRCALMGDMIAESAVKNHWNGVVIYGCVRDVDALAELDLGVHALAAIPQK 127
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+N+KGIGE V + G + G++LYAD +GI++++ +L
Sbjct: 128 SNRKGIGEVDVALYFGNVSFNSGDYLYADNNGIVVAKEKL 167
>gi|257455866|ref|ZP_05621085.1| regulator of ribonuclease activity A [Enhydrobacter aerosaccus
SK60]
gi|257446714|gb|EEV21738.1| regulator of ribonuclease activity A [Enhydrobacter aerosaccus
SK60]
Length = 175
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL-----EE 60
T ++ D NP+ V + F YG F G +VT+K FEDN ++E L +E
Sbjct: 11 TCDLLDDNPECQVCAPNMEGKRFFS-YGGNTKFGGEVVTVKCFEDNSRVKELLATHGKDE 69
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGG S+RCA+LG A +NGWAG++V GC+RDVD++ IGV+AL +
Sbjct: 70 KGNGKVLVVDGGASMRCALLGDMIAQSAVDNGWAGVIVYGCVRDVDDMGKMPIGVQALGA 129
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KG+GE + I+ GG I+ G ++YAD +GI++S+ L
Sbjct: 130 IPRKSNRKGVGETDIEISFGGLTINSGMYVYADNNGIILSQKSL 173
>gi|403052957|ref|ZP_10907441.1| ribonuclease activity regulator protein RraA [Acinetobacter
bereziniae LMG 1003]
gi|445417512|ref|ZP_21434653.1| regulator of ribonuclease activity A [Acinetobacter sp. WC-743]
gi|444761465|gb|ELW85871.1| regulator of ribonuclease activity A [Acinetobacter sp. WC-743]
Length = 170
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP E++ L P F+ YG R+ F G IVT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPD----KEIQTLIPSLDGKFFKSYGARKTFGGQIVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+G G+VLVVDGG S+RCA++G A + W G+++ GC+RDVD + D+GV ALAS
Sbjct: 64 EGAGKVLVVDGGASMRCALMGDMIAESAVKHHWNGVIIYGCVRDVDALAELDLGVHALAS 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+++KGIGE +P+ G + G+++YAD +GI++S+ +L
Sbjct: 124 IPQKSHRKGIGEVDLPLYFGSVSFNSGDYVYADNNGIVVSKEKL 167
>gi|387813838|ref|YP_005429321.1| ribonuclease E (RNase E) inhibitor protein [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338851|emb|CCG94898.1| ribonuclease E (RNase E) inhibitor protein [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 159
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 107/164 (65%), Gaps = 6/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M+ + T ++CD P E++ ++P F YG + F G IVT+K FEDN +++E +
Sbjct: 1 MSKIITPDLCDEFP------EVQVVEPGFNNYGGVRQFGGEIVTVKCFEDNSVVKEQVGL 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRV+VVDGG S R A+LG +A NGWAG+++ GCIRDVDEI ++GV+AL +
Sbjct: 55 PGNGRVMVVDGGASRRNALLGDMLAEKAAENGWAGLIIYGCIRDVDEIGQTNLGVQALGT 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K K+GIG+ ++P+T G G+++YAD +GI++S L
Sbjct: 115 VPRKTEKRGIGDLNIPVTFHGVTFKPGQYVYADNNGIIVSEKPL 158
>gi|407789114|ref|ZP_11136216.1| ribonuclease activity regulator protein RraA [Gallaecimonas
xiamenensis 3-C-1]
gi|407207092|gb|EKE77035.1| ribonuclease activity regulator protein RraA [Gallaecimonas
xiamenensis 3-C-1]
Length = 161
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD ++ ++P+F +G R F G + T+K FEDN LIRE LEE G GR
Sbjct: 5 TSALCDTYIDMV-----DVVEPLFANFGGRSSFGGKVSTIKCFEDNALIREMLEEPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ A N W G+V+NGC+R+VD + +IG+ ALA+ P+ A
Sbjct: 60 VLLVDGGGSLRRALIDAELAELALANNWEGLVINGCVREVDVLEDLEIGIHALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++KG GE VP+ GG +WLYAD GI++S +L +
Sbjct: 120 DEKGQGETEVPVNFGGVTFLPEDWLYADATGIILSPEQLDM 160
>gi|308049192|ref|YP_003912758.1| ribonuclease activity A regulator [Ferrimonas balearica DSM 9799]
gi|307631382|gb|ADN75684.1| regulator of ribonuclease activity A [Ferrimonas balearica DSM
9799]
Length = 161
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 107/159 (67%), Gaps = 5/159 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CDA+P ++ R PIF+ +G +++F GP+VTL+ EDN L+RE + E G GRVL
Sbjct: 7 DLCDAHPDVV-----RLFPPIFRQFGGKRIFHGPVVTLRCPEDNSLVREAVAEPGQGRVL 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
++DGGG R A+LG +A NGW+GIVV G +RDV + D+GV+AL + PMK K
Sbjct: 62 LIDGGGLARRALLGDMLAEKAVANGWSGIVVFGYVRDVATLATLDLGVQALGAVPMKTEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+G++ V + I G RI G++LYAD +G+L++ L +
Sbjct: 122 RGLGDRDVVVEIDGIRIQPGDYLYADDNGVLVAPHALPL 160
>gi|220935715|ref|YP_002514614.1| ribonuclease activity regulator protein RraA [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254809483|sp|B8GM40.1|RRAAH_THISH RecName: Full=Putative regulator of ribonuclease activity
gi|219997025|gb|ACL73627.1| ribonuclease activity regulator protein RraA [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 161
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
L TA++CD + + E F YG FSG IVT++ FEDNVL+R+ LE +G
Sbjct: 8 LTATADLCDQHGEAAGVCETH-----FGDYGGITAFSGEIVTVRCFEDNVLVRQTLEAEG 62
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G+VLVVDGGGSLRCA+ G A +NGWAG++VNGCIRDV I IGV+AL +HP
Sbjct: 63 RGKVLVVDGGGSLRCALFGDMLAQTALDNGWAGVIVNGCIRDVAVIVTLPIGVKALGTHP 122
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K+ K+G G +VP++ G GE ++AD DG+++ +
Sbjct: 123 RKSEKRGEGAVNVPVSFGAITFRPGERVFADEDGVVVLK 161
>gi|262273452|ref|ZP_06051266.1| ribonuclease E inhibitor RraA [Grimontia hollisae CIP 101886]
gi|262222430|gb|EEY73741.1| ribonuclease E inhibitor RraA [Grimontia hollisae CIP 101886]
Length = 161
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + ++ L+P+ YG R F G + T+K FEDN LIRE E+ G GR
Sbjct: 5 TSELCD-----MYLDQVDVLEPMMSSYGGRSSFGGQVTTIKCFEDNGLIREVAEQDGQGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V++VDGGGSLR A++ + A N W GIVV GC+RDVD I+ DIG++ALAS P+ A
Sbjct: 60 VMLVDGGGSLRRALIDADIATLAAENNWEGIVVYGCVRDVDAIDELDIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE VP+ GG + LYADT G+++S + +
Sbjct: 120 DTQGIGEVDVPVNFGGVTFLPEDHLYADTTGVILSPEPIDI 160
>gi|384082182|ref|ZP_09993357.1| ribonuclease activity regulator protein RraA [gamma proteobacterium
HIMB30]
Length = 159
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 104/164 (63%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ +T ++CDA G + L+P+F +G R+ F G +VT+K FEDN ++E G
Sbjct: 1 MKSTPDLCDA-----YEGGISVLEPLFTNFGGRERFYGEVVTVKCFEDNSKVKELAGTAG 55
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
+ RV+VVDGGGSLR A+LG A NGWAG V+ G IRDVDE+ D+GV+ALA++P
Sbjct: 56 HNRVMVVDGGGSLRRALLGDMIAANALANGWAGFVIYGSIRDVDELGAMDLGVQALATNP 115
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
MK KKGIG+ V +T G I G+++ D +GI++S L V
Sbjct: 116 MKTEKKGIGDVDVAVTFAGVTIHPGDFIACDNNGIVVSPIALDV 159
>gi|262278950|ref|ZP_06056735.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259301|gb|EEY78034.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 168
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 102/164 (62%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P FQ YG R+ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVIPSMDGKFFQSYGARKTFGGQVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G +VLVVDGG S+RCA++G A N W G+V+ GC+RDVD I D+G+ ALA
Sbjct: 64 DGTDKVLVVDGGASMRCALMGDLIAESAVKNNWNGVVIYGCVRDVDAIAILDLGIHALAV 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + GG I G+++YAD +GI+IS+ +L
Sbjct: 124 IPQKSNRKGIGEVDTTLYFGGVTIQSGDYIYADNNGIVISKEKL 167
>gi|440731425|ref|ZP_20911445.1| ribonuclease activity regulator protein RraA [Xanthomonas
translucens DAR61454]
gi|440373067|gb|ELQ09840.1| ribonuclease activity regulator protein RraA [Xanthomonas
translucens DAR61454]
Length = 160
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CDA+P++ V+ +P+F+ YG F G IVT+ FEDN +RE G G
Sbjct: 4 TTPDLCDAHPEVQVA------EPLFRSYGGHAAFCGAIVTVSCFEDNARVRELAATPGAG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RV+VVDG GSLR ++LG A NGWAG++++GC+RDV+ + +GV+ALA+ P K
Sbjct: 58 RVIVVDGQGSLRRSLLGDQIAENAVRNGWAGLLLHGCVRDVEALAALPLGVQALAACPRK 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++G+GE VP+ G G WLYAD +G+L++ L
Sbjct: 118 TERRGLGEVDVPLRFAGVAFLPGHWLYADRNGVLVAAQAL 157
>gi|299770365|ref|YP_003732391.1| ribonuclease activity regulator protein RraA [Acinetobacter
oleivorans DR1]
gi|298700453|gb|ADI91018.1| ribonuclease activity regulator protein RraA [Acinetobacter
oleivorans DR1]
Length = 168
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P FQ YG R+ F G +VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KDLQVVIPSMDGKFFQSYGARKTFGGRVVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G +VLVVDGG S+RCA++G A N W G+V+ GC+RDVD + D+GV ALA+
Sbjct: 64 DGTDKVLVVDGGASMRCALMGDLIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + + GG I G+++YAD +GI+I++ +L
Sbjct: 124 IPQKSNRKGIGEVDINLYFGGVTIQSGDFIYADNNGIVIAKEKL 167
>gi|289663277|ref|ZP_06484858.1| ribonuclease activity regulator protein RraA [Xanthomonas
campestris pv. vasculorum NCPPB 702]
Length = 166
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ ++ +P+F+ +G R F+GP+VT++ FEDN +RE G+G
Sbjct: 4 TTPDLCDRYPEVTIA------EPLFRHFGGRTAFAGPMVTVRCFEDNSRVRELAATPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVTNGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G+L++ LS+
Sbjct: 118 TERRDLGDVDVPVNFAGVPFVPGHWLYADANGVLVAPQPLSL 159
>gi|21232068|ref|NP_637985.1| ribonuclease activity regulator protein RraA [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66767806|ref|YP_242568.1| ribonuclease activity regulator protein RraA [Xanthomonas
campestris pv. campestris str. 8004]
gi|37089005|sp|Q8P7H4.1|RRAAH_XANCP RecName: Full=Putative regulator of ribonuclease activity
gi|81306216|sp|Q4UWM5.1|RRAAH_XANC8 RecName: Full=Putative regulator of ribonuclease activity
gi|21113810|gb|AAM41909.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66573138|gb|AAY48548.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Xanthomonas campestris pv. campestris str. 8004]
Length = 166
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ V+ +P+F+ +G R FSGPI T++ EDN IRE G+G
Sbjct: 4 TTPDLCDRFPEVAVA------EPLFRHFGGRTTFSGPIATVRCVEDNSRIRELASTPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSLR A+ G QA NGWAG++++GC+RDV+ + G +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLRQALFGDQIGAQAVANGWAGVLIHGCVRDVEILAGLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G++++ LS+
Sbjct: 118 TERRDLGDVDVPVNFAGVAFVPGHWLYADANGVVVAATPLSL 159
>gi|120554800|ref|YP_959151.1| ribonuclease activity regulator protein RraA [Marinobacter
aquaeolei VT8]
gi|120324649|gb|ABM18964.1| regulator of ribonuclease activity A [Marinobacter aquaeolei VT8]
Length = 159
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M+ + T ++CD P E++ ++P F YG + F G IVT+K FEDN +++E +
Sbjct: 1 MSKIITPDLCDEFP------EVQVVEPGFNNYGGVRQFGGEIVTVKCFEDNSVVKEQVGL 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRV+VVDGG S R A+LG +A NGWAG+++ GCIRDVDEI +GV+AL +
Sbjct: 55 PGNGRVMVVDGGASKRNALLGDMLAEKAAENGWAGLIIYGCIRDVDEIGQTTLGVQALGT 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K K+GIG+ ++P+T G G+++YAD +GI++S L
Sbjct: 115 VPRKTEKRGIGDLNIPVTFHGVTFKPGQYVYADNNGIIVSEKPL 158
>gi|288940971|ref|YP_003443211.1| regulator of ribonuclease activity A [Allochromatium vinosum DSM
180]
gi|288896343|gb|ADC62179.1| regulator of ribonuclease activity A [Allochromatium vinosum DSM
180]
Length = 158
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 95/144 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+LR +PIF+ +G + F GPIVT+K FEDN ++ L E G GRVLVVD GGS RCA+L
Sbjct: 15 DLRTCEPIFRDFGGKSRFHGPIVTVKCFEDNSFVKSTLAEPGAGRVLVVDAGGSRRCAML 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A GWAG+V+ GC+RD EI +G++ALAS P K+ ++G G++ +P++
Sbjct: 75 GDLIAASAVEQGWAGVVLFGCVRDTVEIGRMPLGIKALASIPRKSERRGEGQRDIPVSFA 134
Query: 141 GTRISDGEWLYADTDGILISRAEL 164
G R + G+ +Y D DGIL++ L
Sbjct: 135 GVRFAPGDHIYCDEDGILVADRAL 158
>gi|15805885|ref|NP_294583.1| ribonuclease activity regulator protein RraA [Deinococcus
radiodurans R1]
gi|17369587|sp|Q9RW10.1|RRAAH_DEIRA RecName: Full=Putative regulator of ribonuclease activity
gi|6458578|gb|AAF10437.1|AE001940_1 S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Deinococcus radiodurans R1]
Length = 160
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++ DA PQ V+ P+ + +G R F G VTL++ E+N L+R+ L+ G
Sbjct: 4 FIPTTDLSDAQPQAQVAA------PVLRDFGGRTRFQGAAVTLRISENNPLVRQTLQTPG 57
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSL CA+LGGN V NGW G++++GC+RD E+ D+G+RALA+HP
Sbjct: 58 AGRVLVVDGGGSLNCALLGGNLGVFGVENGWEGVIIHGCVRDTAELRELDLGIRALAAHP 117
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
++ K GE+ VP+T G I G+ + AD DG L+ AE
Sbjct: 118 RRSGKLEEGERDVPVTFAGVTIRPGDHVVADEDGWLVLGAE 158
>gi|148977241|ref|ZP_01813868.1| ribonuclease activity regulator protein RraA [Vibrionales bacterium
SWAT-3]
gi|417947906|ref|ZP_12591056.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
ATCC 33789]
gi|145963523|gb|EDK28786.1| ribonuclease activity regulator protein RraA [Vibrionales bacterium
SWAT-3]
gi|342810535|gb|EGU45614.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
ATCC 33789]
Length = 172
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G I TLK FEDN LIR LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTLKCFEDNALIRSVLEQDGLG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ + A++N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRKALIDAEMALLAEDNEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ G+GE VP+ G ++LYAD GI++S L V
Sbjct: 119 ASQDGVGELDVPVNFGSVTFLPEDYLYADNTGIILSAEPLDV 160
>gi|333908284|ref|YP_004481870.1| ribonuclease activity A regulator [Marinomonas posidonica
IVIA-Po-181]
gi|333478290|gb|AEF54951.1| Regulator of ribonuclease activity A [Marinomonas posidonica
IVIA-Po-181]
Length = 163
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 101/159 (63%), Gaps = 5/159 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD P+LI E P+FQ YG+R F G +VT+ FEDN +RE + E G G+V+
Sbjct: 8 DLCDLYPELIQIAE-----PVFQSYGKRTCFYGQVVTVSCFEDNSRVRELVTENGQGKVM 62
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
VVDGGGS R A+LG +A NNGW G V+NG IRDV +IG+ AL +HP+ K
Sbjct: 63 VVDGGGSKRRALLGDMLAEKAANNGWEGFVINGAIRDVQAQADLNIGIHALCAHPLPTEK 122
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+G+ + G +I++G+++Y D +G L+S+ L++
Sbjct: 123 RGLGDLGRTLCFAGIQIAEGDYIYCDLNGTLVSKQALTL 161
>gi|91226625|ref|ZP_01261349.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
12G01]
gi|269964743|ref|ZP_06178981.1| Regulator of ibonuclease activity A protein 2 [Vibrio alginolyticus
40B]
gi|91189099|gb|EAS75381.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
12G01]
gi|269830642|gb|EEZ84863.1| Regulator of ibonuclease activity A protein 2 [Vibrio alginolyticus
40B]
Length = 168
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTIKCFEDNSLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRKALIDAEIATIAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE VP+ GG +++YAD+ GI++S L++
Sbjct: 120 TSQGIGELDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNI 160
>gi|402757844|ref|ZP_10860100.1| ribonuclease activity regulator protein RraA [Acinetobacter sp.
NCTC 7422]
Length = 170
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 6 TAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
T ++ D NP+ +L+ + P F+ YG R+ F G VT+K FEDN ++E L
Sbjct: 8 TCDLLDDNPE----KKLQVVTPSLDGKFFKSYGARKTFGGQAVTVKCFEDNSRVKELLAT 63
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGG S+RCA++G A + W G+V+ GC+RDVD I D+GV ALA+
Sbjct: 64 DGTGKVLVVDGGASMRCALMGDLIAESAVKHHWNGVVIYGCVRDVDAIAELDLGVHALAA 123
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N+KGIGE + + GG I+ G+++YAD +GI+I+ +L
Sbjct: 124 IPQKSNRKGIGEVDITLYFGGVTINSGDYIYADNNGIVIAEEKL 167
>gi|451977638|ref|ZP_21927712.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
E0666]
gi|451929494|gb|EMD77237.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
E0666]
Length = 168
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTIKCFEDNSLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRKALIDAEIATIAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE VP+ GG +++YAD+ GI++S L++
Sbjct: 120 TSQGIGELDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNI 160
>gi|114776249|ref|ZP_01451294.1| hypothetical protein SPV1_00977 [Mariprofundus ferrooxydans PV-1]
gi|114553079|gb|EAU55477.1| hypothetical protein SPV1_00977 [Mariprofundus ferrooxydans PV-1]
Length = 159
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 96/144 (66%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
L+ P+F+ +G RQ FSG IVTLK FEDN ++ E G G+VLVVD G SLRCA++
Sbjct: 14 SLQVAAPVFRDFGGRQRFSGQIVTLKAFEDNSFLKAAFETDGRGKVLVVDSGASLRCAMM 73
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G +NGW G+V+NGCIRD ++ ++GV+ALA+ P K K+ G + +P++
Sbjct: 74 GDVMAALGASNGWEGVVINGCIRDSADVAKVNLGVKALATTPRKTIKRNQGVRDIPLSFA 133
Query: 141 GTRISDGEWLYADTDGILISRAEL 164
G + + G+++YAD DGI++S+ ++
Sbjct: 134 GVQFNPGDYMYADEDGIVLSKTKI 157
>gi|344338562|ref|ZP_08769494.1| Regulator of ribonuclease activity A [Thiocapsa marina 5811]
gi|343801844|gb|EGV19786.1| Regulator of ribonuclease activity A [Thiocapsa marina 5811]
Length = 172
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 97/146 (66%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+R PIF+ +G + F GP+VT+K FEDN ++ L E G+GRVLVVD GGS+RCA+L
Sbjct: 26 RVRICDPIFRDFGGQVRFCGPVVTVKCFEDNSPVKSTLAEPGHGRVLVVDAGGSMRCAML 85
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A GWAG+++ GCIRD +I +GV+AL +HP K++++G G++ +P+T
Sbjct: 86 GDLIAAGAVEQGWAGVILYGCIRDSRDIAAMPLGVKALGTHPRKSHRRGEGQRDIPVTFA 145
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G R + G+ +Y D DGIL++ L +
Sbjct: 146 GLRFTPGDEVYCDEDGILVADVPLDL 171
>gi|325917095|ref|ZP_08179328.1| RraA family protein [Xanthomonas vesicatoria ATCC 35937]
gi|325536671|gb|EGD08434.1| RraA family protein [Xanthomonas vesicatoria ATCC 35937]
Length = 164
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 102/160 (63%), Gaps = 6/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++IV+ +P+F+ +G R VF G I T++ FEDN +RE G G
Sbjct: 4 TTPDLCDRFPEVIVA------EPLFRHFGGRTVFCGSIATVRCFEDNSRVRELASTPGAG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG QA NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIASQAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++ +G+ VP+ G G WLYADT+G+L++ L
Sbjct: 118 TERRDLGDVDVPVNFAGVPFVPGHWLYADTNGVLVTPLPL 157
>gi|386360170|ref|YP_006058415.1| RraA family protein [Thermus thermophilus JL-18]
gi|383509197|gb|AFH38629.1| RraA family protein [Thermus thermophilus JL-18]
Length = 164
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 103/154 (66%), Gaps = 6/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++ D +P+ GE L +F+ +G + F+G + TLKVFEDN L+R LEE G G+
Sbjct: 5 TPDLSDLHPE----GE--TLPMVFKSFGGKTRFAGRVRTLKVFEDNALVRRVLEEGGEGQ 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL VDGGGSLR A+LGGN A GWAG+VV+G +RDV+E+ IG+ ALA+ P K+
Sbjct: 59 VLFVDGGGSLRTALLGGNLARLAWERGWAGVVVHGAVRDVEELKDVPIGILALAATPRKS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+G GE VP+++ G R+ G +L AD DGIL+
Sbjct: 119 AKEGKGEVDVPLSLLGVRVLPGSFLVADEDGILL 152
>gi|294625111|ref|ZP_06703756.1| ribonuclease activity regulator protein RraA [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294665483|ref|ZP_06730767.1| ribonuclease activity regulator protein RraA [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292600575|gb|EFF44667.1| ribonuclease activity regulator protein RraA [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292604737|gb|EFF48104.1| ribonuclease activity regulator protein RraA [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 166
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P+ ++ +P+F+ +G R F+GP+VT++ FEDN +RE G+G
Sbjct: 4 TTPDLCDRYPEATIA------EPLFRHFGGRTAFAGPMVTVRCFEDNSRVRELAATPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEMLATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G+L++ L++
Sbjct: 118 TERRDLGDVDVPVNFAGVPFVPGHWLYADANGVLVAPQPLAL 159
>gi|84390849|ref|ZP_00991541.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
12B01]
gi|84376652|gb|EAP93529.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
12B01]
Length = 172
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 103/155 (66%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I TLK FEDN LIR LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTLKCFEDNALIRSVLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ + A++N W GIVV GC+R+VDE+ +IG++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRKALIDAEIALLAEDNEWEGIVVYGCVREVDELEDMNIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+++G+GE VP+ G ++LYAD GI++S
Sbjct: 120 SQEGVGELDVPVNFGSVTFLPEDYLYADNTGIILS 154
>gi|406038820|ref|ZP_11046175.1| ribonuclease activity regulator protein RraA [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 170
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 106/171 (61%), Gaps = 11/171 (6%)
Query: 1 MALV--TTAEVCDANPQLIVSGELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVL 53
M+LV T ++ D +P +++ + P F+ YG R+ F G IVT+K FEDN
Sbjct: 1 MSLVPFVTCDLLDDHPD----KDIQVVTPSLDGRFFKSYGARKTFGGQIVTVKCFEDNSR 56
Query: 54 IREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDI 113
++E L G G+VLVVDGG S+RCA++G A N W G+V+ GC+RDVD I D+
Sbjct: 57 VKELLATDGTGKVLVVDGGASMRCALMGDMIAESAVKNHWNGVVIYGCVRDVDAIAELDL 116
Query: 114 GVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
GV ALA+ P K+N+KGIGE V + GG G+++YAD +GI+++ +L
Sbjct: 117 GVHALAAIPQKSNRKGIGEVDVNLYFGGVTFKSGDFIYADNNGIVVATEQL 167
>gi|375264277|ref|YP_005021720.1| ribonuclease activity regulator protein RraA [Vibrio sp. EJY3]
gi|369839601|gb|AEX20745.1| ribonuclease activity regulator protein RraA [Vibrio sp. EJY3]
Length = 180
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 106/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGRASFAGQITTIKCFEDNSLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRKALVDAEIATIAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE VP+ GG +++YAD+ GI++S L++
Sbjct: 120 SSQGIGELDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNI 160
>gi|156973042|ref|YP_001443949.1| ribonuclease activity regulator protein RraA [Vibrio harveyi ATCC
BAA-1116]
gi|156524636|gb|ABU69722.1| hypothetical protein VIBHAR_00721 [Vibrio harveyi ATCC BAA-1116]
Length = 175
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G + T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVTTIKCFEDNTLIRETLEQDGIGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAEIATLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE VP+ GG +++YAD+ GI++S L+V
Sbjct: 120 ANQGIGEIDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNV 160
>gi|387927687|ref|ZP_10130366.1| ribonuclease activity regulator protein RraA [Bacillus methanolicus
PB1]
gi|387589831|gb|EIJ82151.1| ribonuclease activity regulator protein RraA [Bacillus methanolicus
PB1]
Length = 159
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 105/159 (66%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD S EL F+ YG++ F GPI T+KVFEDNVL++E L++ G
Sbjct: 5 TADLCDD-----FSNELEVCTLEFKSYGKKTSFYGPIYTVKVFEDNVLVKEALQDVPAGS 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA+LG A++ G AG+++NGC+RD E+ ++G+ A+ S+P+K+
Sbjct: 60 VLVVDGGGSKRCALLGDRLGEIAESRGLAGVIINGCVRDTAELKDLNVGILAIGSNPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
NK+G GE++V + G S ++ YAD DG+++S +L
Sbjct: 120 NKEGKGERNVSVAFGEVEWSPEKFAYADEDGVIVSNKKL 158
>gi|350530047|ref|ZP_08908988.1| ribonuclease activity regulator protein RraA [Vibrio rotiferianus
DAT722]
Length = 174
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G + T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVTTIKCFEDNTLIRETLEQDGIGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAEIATLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE VP+ GG +++YAD+ GI++S L++
Sbjct: 120 ANQGIGEIDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNI 160
>gi|444424470|ref|ZP_21219926.1| ribonuclease activity regulator protein RraA [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|444242176|gb|ELU53691.1| ribonuclease activity regulator protein RraA [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 175
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G + T+K FEDN LIRE LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVTTIKCFEDNALIRETLEQDGIG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDAEIATLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A +GIGE VP+ GG +++YAD+ GI++S L+V
Sbjct: 119 AANQGIGEIDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNV 160
>gi|424034270|ref|ZP_17773677.1| regulator of ribonuclease activity A [Vibrio cholerae HENC-01]
gi|424037553|ref|ZP_17776318.1| regulator of ribonuclease activity A [Vibrio cholerae HENC-02]
gi|408873421|gb|EKM12619.1| regulator of ribonuclease activity A [Vibrio cholerae HENC-01]
gi|408895409|gb|EKM31809.1| regulator of ribonuclease activity A [Vibrio cholerae HENC-02]
Length = 175
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G + T+K FEDN LIRE LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVTTIKCFEDNALIRETLEQDGIG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDAEIATLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A +GIGE VP+ GG +++YAD+ GI++S L+V
Sbjct: 119 AANQGIGEIDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNV 160
>gi|399154230|ref|ZP_10754297.1| ribonuclease activity regulator protein RraA [gamma proteobacterium
SCGC AAA007-O20]
Length = 158
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 10 CDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVV 69
CD + +L E++ L+P+++IYG + FSG IVT+K +EDN L+ + L G VLV+
Sbjct: 6 CDISDKL--HPEVQYLEPVYKIYGAKTSFSGRIVTVKCYEDNSLVEQALSGNGKESVLVI 63
Query: 70 DGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKG 129
D GGS+ CA+LG A NN W GI+V+G IRD ING ++G+RAL +P+K+ K G
Sbjct: 64 DAGGSMNCAMLGDKRAADAINNEWEGIIVHGLIRDSVAINGMELGIRALGVYPLKSIKNG 123
Query: 130 IGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+G+ ++ + G + GE+LYAD DG+++ + +L
Sbjct: 124 VGDSNLIVNFSGVTFTPGEYLYADEDGVIVVKEKL 158
>gi|424048169|ref|ZP_17785723.1| regulator of ribonuclease activity A [Vibrio cholerae HENC-03]
gi|408882804|gb|EKM21599.1| regulator of ribonuclease activity A [Vibrio cholerae HENC-03]
Length = 176
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G + T+K FEDN LIRE LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVTTVKCFEDNALIRETLEQDGIG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDAEIATLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A +GIGE VP+ GG +++YAD+ GI++S L+V
Sbjct: 119 AANQGIGEIDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNV 160
>gi|269959682|ref|ZP_06174062.1| Regulator of ibonuclease activity A protein 2 [Vibrio harveyi 1DA3]
gi|269835605|gb|EEZ89684.1| Regulator of ibonuclease activity A protein 2 [Vibrio harveyi 1DA3]
Length = 175
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G + T+K FEDN LIRE LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVTTVKCFEDNALIRETLEQDGIG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDAEIATLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A +GIGE VP+ GG +++YAD+ GI++S L+V
Sbjct: 119 AANQGIGEIDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNV 160
>gi|46199260|ref|YP_004927.1| ribonuclease activity regulator protein RraA [Thermus thermophilus
HB27]
gi|61215971|sp|Q72J23.1|RRAAH_THET2 RecName: Full=Putative regulator of ribonuclease activity
gi|46196885|gb|AAS81300.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Thermus thermophilus HB27]
Length = 164
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 103/154 (66%), Gaps = 6/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++ D P+ GE AL +F+ +G R F+G + TL+VFEDN L+R+ LEE+G G+
Sbjct: 5 TTDLSDLYPE----GE--ALPMVFKSFGGRARFAGRVRTLRVFEDNALVRKVLEEEGAGQ 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL VDGGGSLR A+LGGN A GWAG+VV+G +RD +E+ G IG+ ALA+ P K+
Sbjct: 59 VLFVDGGGSLRTALLGGNLARLAWERGWAGVVVHGAVRDTEELRGVPIGLLALAATPKKS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+G GE VP+ + G + G +L AD DG+L+
Sbjct: 119 AKEGKGEVDVPLKVLGVEVLPGSFLLADEDGLLL 152
>gi|388600273|ref|ZP_10158669.1| ribonuclease activity regulator protein RraA [Vibrio campbellii
DS40M4]
Length = 173
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G + T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVTTIKCFEDNALIRETLEQDGIGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAEIATLAEENEWEGIVVFGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE VP+ GG +++YAD+ GI++S L+V
Sbjct: 120 ANQGIGEIDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNV 160
>gi|159470809|ref|XP_001693549.1| regulator of ribonuclease activity [Chlamydomonas reinhardtii]
gi|158283052|gb|EDP08803.1| regulator of ribonuclease activity [Chlamydomonas reinhardtii]
Length = 137
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 96/135 (71%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
+G + FSG + T++ +E+N L+R+ LEE G GRVLVVDGG S+RCA+LG N
Sbjct: 3 FGGKLRFSGQVSTVRCYENNPLVRKALEEPGMGRVLVVDGGASMRCALLGDMLAESGVKN 62
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
GWAGI+VNGCIRD +I +GV+AL +HP+K++K+ G + V + GG I+ G+W+Y
Sbjct: 63 GWAGIIVNGCIRDSADIAKMALGVKALGTHPLKSSKRDPGLRDVLVAFGGVAIAPGDWVY 122
Query: 152 ADTDGILISRAELSV 166
AD DGIL+S+ +L++
Sbjct: 123 ADADGILVSKEQLTL 137
>gi|86147297|ref|ZP_01065611.1| ribonuclease activity regulator protein RraA [Vibrio sp. MED222]
gi|218710821|ref|YP_002418442.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
LGP32]
gi|85834862|gb|EAQ53006.1| ribonuclease activity regulator protein RraA [Vibrio sp. MED222]
gi|218323840|emb|CAV20201.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio splendidus LGP32]
Length = 172
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 103/155 (66%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I TLK FEDN LIR LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTLKCFEDNALIRSVLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ + A++N W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRKALIDAEIALLAEDNEWEGIVVYGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+++G+GE VP+ G ++LYAD GI++S
Sbjct: 120 SQEGVGELDVPVNFGSVTFLPEDYLYADNTGIILS 154
>gi|28897021|ref|NP_796626.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus RIMD 2210633]
gi|153840196|ref|ZP_01992863.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ3810]
gi|260362286|ref|ZP_05775253.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
K5030]
gi|260877931|ref|ZP_05890286.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AN-5034]
gi|260897601|ref|ZP_05906097.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
Peru-466]
gi|260899531|ref|ZP_05907926.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ4037]
gi|417321145|ref|ZP_12107685.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus 10329]
gi|433656576|ref|YP_007273955.1| Ribonuclease E inhibitor RraA [Vibrio parahaemolyticus BB22OP]
gi|33301271|sp|Q87T23.1|RRAA_VIBPA RecName: Full=Regulator of ribonuclease activity A
gi|28805229|dbj|BAC58510.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio parahaemolyticus RIMD 2210633]
gi|149746138|gb|EDM57268.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ3810]
gi|308087503|gb|EFO37198.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
Peru-466]
gi|308090044|gb|EFO39739.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AN-5034]
gi|308108748|gb|EFO46288.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ4037]
gi|308111353|gb|EFO48893.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
K5030]
gi|328471825|gb|EGF42702.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus 10329]
gi|432507264|gb|AGB08781.1| Ribonuclease E inhibitor RraA [Vibrio parahaemolyticus BB22OP]
Length = 170
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTIKCFEDNSLIRETLEQDGLG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRKALIDAEIAAIAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A +GIGE VP+ GG +++YAD GI++S L++
Sbjct: 119 AANQGIGELDVPVNFGGVSFLPEDYIYADNTGIILSPEPLNI 160
>gi|346725634|ref|YP_004852303.1| ribonuclease activity regulator protein RraA [Xanthomonas
axonopodis pv. citrumelo F1]
gi|346650381|gb|AEO43005.1| ribonuclease activity regulator protein RraA [Xanthomonas
axonopodis pv. citrumelo F1]
Length = 166
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P + ++ +P+F+ +G R F+GP+VT++ FEDN +RE G+G
Sbjct: 4 TTPDLCDRYPDVTIA------EPLFRHFGGRTAFAGPMVTVRCFEDNSRVRELAAMPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G+L++ L++
Sbjct: 118 TERRDLGDVDVPVNFAGVPFVSGHWLYADANGVLVAPQPLAL 159
>gi|339058267|ref|ZP_08648765.1| Ribonuclease E inhibitor RraA [gamma proteobacterium IMCC2047]
gi|330720525|gb|EGG98811.1| Ribonuclease E inhibitor RraA [gamma proteobacterium IMCC2047]
Length = 162
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD P L+ ++P+ +G R F G IVT+K FEDN L++E L + G G+
Sbjct: 5 TPDLCDEYPDLVA-----VMEPLTSSFGGRIAFGGEIVTVKCFEDNSLVKEELAKPGAGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S+R A++G A NGW G+V+ GCIRDVD I D+GV+A+ + P+K
Sbjct: 60 VLVVDGGASMRRALMGDMIAENAVKNGWEGVVIYGCIRDVDVIMELDLGVQAINTIPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+G G+ ++P++ GG GE++YAD +G+++S L++
Sbjct: 120 DKRGEGQLNIPVSFGGVTFKPGEFVYADNNGVIVSPQALNL 160
>gi|325926520|ref|ZP_08187837.1| RraA family protein [Xanthomonas perforans 91-118]
gi|325543092|gb|EGD14538.1| RraA family protein [Xanthomonas perforans 91-118]
Length = 176
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P + ++ +P+F+ +G R F+GP+VT++ FEDN +RE G+G
Sbjct: 14 TTPDLCDRYPDVTIA------EPLFRHFGGRTAFAGPMVTVRCFEDNSRVRELSAMPGDG 67
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 68 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 127
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G+L++ L++
Sbjct: 128 TERRDLGDVDVPVNFAGVPFVPGHWLYADANGVLVAPQPLAL 169
>gi|269125390|ref|YP_003298760.1| regulator of ribonuclease activity A [Thermomonospora curvata DSM
43183]
gi|268310348|gb|ACY96722.1| regulator of ribonuclease activity A [Thermomonospora curvata DSM
43183]
Length = 159
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 93/144 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL + + F+ YG R F+GPI T++ DN L+++ L G GRVLVVDGGGSL A++
Sbjct: 15 ELASCETQFRQYGARTAFAGPIATIRCHRDNALVKKLLNTPGEGRVLVVDGGGSLASALM 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A GW+G+V+NG +RDV + ++G++AL S+P K+ K+G+GE VP+T G
Sbjct: 75 GDLIAASAVEQGWSGVVINGAVRDVATLRTLNLGIKALGSNPRKSAKEGVGEVDVPVTFG 134
Query: 141 GTRISDGEWLYADTDGILISRAEL 164
G G WLY+D DGI+++ L
Sbjct: 135 GVEFRPGHWLYSDEDGIVVASRRL 158
>gi|392954919|ref|ZP_10320470.1| regulator of ribonuclease activity A [Hydrocarboniphaga effusa
AP103]
gi|391857576|gb|EIT68107.1| regulator of ribonuclease activity A [Hydrocarboniphaga effusa
AP103]
Length = 160
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 12/167 (7%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M+ TT ++ DA+P V+ PIF+ +G + F G + T+KVFEDN L+R LE
Sbjct: 1 MSFATT-DLSDAHPDAPVAA------PIFRDFGGKTAFHGQVKTIKVFEDNALVRSTLET 53
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGGS RCA++GGN V NGWAGIVV G IRD EI IG++AL
Sbjct: 54 PGEGRVLVVDGGGSDRCALVGGNLGVLGVKNGWAGIVVFGYIRDSAEIATQAIGIKALGL 113
Query: 121 HPMKANK---KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP K+ K + +K P++ +G+WLYAD DGI++S L
Sbjct: 114 HPKKSEKGLHSAVSDK--PVSFARVTFRNGDWLYADADGIVVSEQPL 158
>gi|357384408|ref|YP_004899132.1| ribonuclease E inhibitor RraA [Pelagibacterium halotolerans B2]
gi|351593045|gb|AEQ51382.1| ribonuclease E inhibitor RraA [Pelagibacterium halotolerans B2]
Length = 160
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + TA++ D + +L+ +G+ F G IVTLK FEDN L+RE LE+
Sbjct: 1 MGIKKTADLVDGYDE-----KLKFCDYPLTKFGQADGFEGEIVTLKTFEDNALLREILEQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRVLVVDGGGS R AI+G NNGWAG+V+NG IRD +I+ D V A+ +
Sbjct: 56 PGNGRVLVVDGGGSTRVAIVGDQIAALGMNNGWAGLVLNGSIRDSVDIDAMDYAVFAVGT 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
P K+ K G K VP+T G + G +LYAD DGIL+S
Sbjct: 116 SPKKSTKTRAGFKDVPVTFGDMTFTPGHYLYADADGILVSE 156
>gi|262392525|ref|YP_003284379.1| ribonuclease E inhibitor RraA [Vibrio sp. Ex25]
gi|262336119|gb|ACY49914.1| ribonuclease E inhibitor RraA [Vibrio sp. Ex25]
Length = 169
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTIKCFEDNSLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ + W GIVV GC+R+VDE+ ++G++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRKALIDAEIATIAEESEWEGIVVYGCVREVDELEDMNLGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE VP+ GG +++YAD+ GI++S L++
Sbjct: 120 TSQGIGELDVPVNFGGVSFLPEDYIYADSTGIILSPEPLNI 160
>gi|46014892|pdb|1J3L|A Chain A, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
gi|46014893|pdb|1J3L|B Chain B, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
gi|46014894|pdb|1J3L|C Chain C, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
gi|46014895|pdb|1J3L|D Chain D, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
gi|46014896|pdb|1J3L|E Chain E, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
gi|46014897|pdb|1J3L|F Chain F, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
Length = 164
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 103/154 (66%), Gaps = 6/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++ D P+ GE AL +F+ +G R F+G + TL+VFEDN L+R+ LEE+G G+
Sbjct: 5 TTDLSDLYPE----GE--ALPXVFKSFGGRARFAGRVRTLRVFEDNALVRKVLEEEGAGQ 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL VDGGGSLR A+LGGN +A GWAG+VV+G +RD +E+ IG+ ALA+ P K+
Sbjct: 59 VLFVDGGGSLRTALLGGNLARRAWEKGWAGVVVHGAVRDTEELREVPIGLLALAATPKKS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+G GE VP+ + G + G +L AD DG+L+
Sbjct: 119 AKEGKGEVDVPLKVLGVEVLPGSFLLADEDGLLL 152
>gi|296269613|ref|YP_003652245.1| ribonuclease activity A regulator [Thermobispora bispora DSM 43833]
gi|296092400|gb|ADG88352.1| regulator of ribonuclease activity A [Thermobispora bispora DSM
43833]
Length = 159
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 91/144 (63%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL + + F YG R F+GPI T++ F DN L++ L G GRVLVVDGGGSL A++
Sbjct: 15 ELASCETQFIQYGGRTAFAGPIATIRCFRDNALVKRVLSGPGEGRVLVVDGGGSLASALM 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG +RDV + D+G++AL S+P K+ K G GE VP++ G
Sbjct: 75 GDVIARSAVENGWAGVVINGAVRDVATLRTLDLGIKALGSNPRKSAKDGAGEVDVPVSFG 134
Query: 141 GTRISDGEWLYADTDGILISRAEL 164
G G WLY+D DGI+++ L
Sbjct: 135 GVEFRPGHWLYSDEDGIVVAARRL 158
>gi|72163126|ref|YP_290783.1| ribonuclease activity regulator protein RraA [Thermobifida fusca
YX]
gi|71916858|gb|AAZ56760.1| Protein of unknown function 1935 [Thermobifida fusca YX]
Length = 163
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 103/162 (63%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++ DA + S EL+ F+ +G + F GPI T+K EDN L++E L + G+G
Sbjct: 6 ATADLIDAYGDELASCELQ-----FRQFGGVRAFFGPIQTIKCHEDNALVKEVLNQPGDG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGG SLR A++G A+ NGWAG+V+NG +RDV E+ +G++AL S+P K
Sbjct: 61 RVLVVDGGSSLRSALMGDMIARAAERNGWAGVVINGAVRDVAELATLSLGIKALGSNPRK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K G G+ V + G + G WLY+D DGI++S ELS+
Sbjct: 121 SAKAGAGQVGVNVAFGQVVFTPGAWLYSDEDGIVVSAKELSL 162
>gi|356960755|ref|ZP_09063737.1| ribonuclease activity regulator protein RraA [gamma proteobacterium
SCGC AAA001-B15]
Length = 158
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 104/160 (65%), Gaps = 5/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT+++ D + +++ L+P+++IYG + FSG IVT+K +EDN L+ E L+ G
Sbjct: 4 TTSDISDK-----LHPDVQYLEPVYKIYGAKTSFSGHIVTVKCYEDNSLVEEALKGNGKE 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLV+D GGS+ CA+LG V A NN W GI+V+G IRD ING +IG+RAL P+K
Sbjct: 59 SVLVIDAGGSMNCAMLGDKRVADAINNEWEGIIVHGLIRDSVAINGMEIGIRALGVCPLK 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ K G+G+ ++ + G + G++LYAD DG+++ + L
Sbjct: 119 SIKNGVGDSNLIVNFSGVTFTPGDYLYADDDGVIVVKERL 158
>gi|21243534|ref|NP_643116.1| ribonuclease activity regulator protein RraA [Xanthomonas
axonopodis pv. citri str. 306]
gi|37089016|sp|Q8PIT8.1|RRAAH_XANAC RecName: Full=Putative regulator of ribonuclease activity
gi|21109099|gb|AAM37652.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Xanthomonas axonopodis pv. citri str. 306]
Length = 166
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P +++ +P+F+ +G R F+GP+ T++ FEDN +RE G+G
Sbjct: 4 TTPDLCDRYPDAMIA------EPLFRHFGGRTAFAGPLATVRCFEDNSRVRELAATPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G+L++ L++
Sbjct: 118 TERRDLGDVDVPVNFAGVPFVPGHWLYADANGVLVAPQPLAL 159
>gi|415885858|ref|ZP_11547681.1| ribonuclease activity regulator protein RraA [Bacillus methanolicus
MGA3]
gi|387588511|gb|EIJ80832.1| ribonuclease activity regulator protein RraA [Bacillus methanolicus
MGA3]
Length = 159
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD S EL F+ YG++ F GP+ T+KVFEDNVL++E LE+ G
Sbjct: 5 TADLCDD-----FSNELEVCTLEFKSYGKKTSFYGPLYTVKVFEDNVLVKEALEDVPAGS 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA+LG A+ G AG+++NGC+RD E+ +G+ A+ S+P+K+
Sbjct: 60 VLVVDGGGSKRCALLGDRLGEIAERRGLAGVIINGCVRDTAELKDLHVGILAIGSNPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE++VP+ G + ++ YAD DG+++S +L
Sbjct: 120 KKEGKGERNVPVIFGEVEWTPRKFAYADEDGVIVSNKKL 158
>gi|384418614|ref|YP_005627974.1| ribonuclease activity A regulator [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353461527|gb|AEQ95806.1| regulator of ribonuclease activity A [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 166
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ ++ +P+F+ +G R F GP+VT++ FEDN +RE G+
Sbjct: 4 TTPDLCDRYPEVTIA------EPLFRHFGGRTAFCGPMVTVRCFEDNSRMRELAATPGDA 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEMLATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +G+ VP+ G G WLYAD +G+L+S +S+
Sbjct: 118 TERGDLGDVDVPVNFAGVPFVPGHWLYADANGVLVSPQPMSL 159
>gi|149908694|ref|ZP_01897355.1| ribonuclease activity regulator protein RraA [Moritella sp. PE36]
gi|149808236|gb|EDM68175.1| ribonuclease activity regulator protein RraA [Moritella sp. PE36]
Length = 159
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 97/144 (67%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L ++PIFQ YG +FSG VT+K FEDN L++E G GR+LV+DGGGS R A+L
Sbjct: 15 QLSVMEPIFQSYGNATIFSGQAVTVKCFEDNSLVKELAGTPGEGRILVIDGGGSTRRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NNGWAG V+ G IRDV IN ++GV+A+ + P+K K+G+G+ + +
Sbjct: 75 GDMIAENAVNNGWAGFVIYGAIRDVATINTLNLGVKAITACPVKTEKRGLGDAGIDLHFA 134
Query: 141 GTRISDGEWLYADTDGILISRAEL 164
G I++G+++YAD +G+++++ L
Sbjct: 135 GVSIAEGDYIYADLNGVVVAKEPL 158
>gi|418516374|ref|ZP_13082548.1| ribonuclease activity regulator protein RraA [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|418519680|ref|ZP_13085732.1| ribonuclease activity regulator protein RraA [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410705124|gb|EKQ63603.1| ribonuclease activity regulator protein RraA [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410706913|gb|EKQ65369.1| ribonuclease activity regulator protein RraA [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 166
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P +++ +P+F+ +G R F+GP+ T++ FEDN +RE G+G
Sbjct: 4 TTPDLCDRYPDAMIA------EPLFRHFGGRTAFAGPLATVRCFEDNSRVRELAATPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G+L++ L++
Sbjct: 118 TERRDLGDVDVPVNFAGVPFVPGHWLYADANGMLVAPQPLAL 159
>gi|336123098|ref|YP_004565146.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio anguillarum 775]
gi|335340821|gb|AEH32104.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio anguillarum 775]
Length = 184
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 103/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G + T+K FEDN LIRE LE+ G GR
Sbjct: 16 TSALCD-----IYLDQVDVVEPMFSNFGGSASFAGQLTTIKCFEDNGLIREVLEQDGLGR 70
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++ALAS P+ A
Sbjct: 71 VLLIDGGGSLRRALIDAELAALAEENEWEGIVVYGCVREVDELEEMSIGIQALASIPVGA 130
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE VP+ GG ++LYAD GI++S L+V
Sbjct: 131 SNQGIGEVDVPVNFGGVTFLPEDYLYADNTGIILSPEPLNV 171
>gi|444376846|ref|ZP_21176084.1| Ribonuclease E inhibitor RraA [Enterovibrio sp. AK16]
gi|443678971|gb|ELT85633.1| Ribonuclease E inhibitor RraA [Enterovibrio sp. AK16]
Length = 161
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 103/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + ++ L+P+ YG R F G + T+K FEDN LIRE E+ G GR
Sbjct: 5 TSELCD-----MYLDQVDVLEPMMSSYGGRSSFGGQVTTIKCFEDNGLIREVAEQDGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V++VDGGGSLR A++ + A +N W GIVV GC+RDVD I+ DIG++ALAS P+ A
Sbjct: 60 VMLVDGGGSLRRALVDADIAAMAADNNWEGIVVYGCVRDVDTIDELDIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ + IGE VP+ GG + LYADT G+++S+ + +
Sbjct: 120 DSQSIGEVDVPVNFGGVTFLPEDHLYADTTGVILSQEAIDI 160
>gi|407070306|ref|ZP_11101144.1| ribonuclease activity regulator protein RraA [Vibrio cyclitrophicus
ZF14]
Length = 172
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 102/156 (65%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G I TLK FEDN LIR LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITTLKCFEDNALIRSVLEQDGLG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ + A++N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRKALIDAEIALLAEDNEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A++ G+GE VP+ G ++LYAD GI++S
Sbjct: 119 ASQGGVGEIDVPVNFGSVTFLPEDYLYADNTGIILS 154
>gi|312882799|ref|ZP_07742533.1| ribonuclease activity regulator protein RraA [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309369583|gb|EFP97101.1| ribonuclease activity regulator protein RraA [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 170
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I S ++ ++P+F +G R FSG I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYSEQVDVVEPMFSNFGGRASFSGQITTVKCFEDNGLIRETLEQDGIGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ +IG++A+AS P +
Sbjct: 60 VLLIDGGGSLRRALVDAEVAALAEENEWEGIVVYGCVREVDELEEMNIGIQAIASIPAGS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
G G+ VP+ GG ++LYAD G+++S+ L V
Sbjct: 120 PTTGTGDTDVPVNFGGVTFLPEDYLYADNTGVILSQEPLDV 160
>gi|424793737|ref|ZP_18219810.1| Regulator of ribonuclease activity A [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796406|gb|EKU24916.1| Regulator of ribonuclease activity A [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 160
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 99/160 (61%), Gaps = 6/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CDA+P++ V+ +P+F YG F G IVT+ FEDN +RE G G
Sbjct: 4 TTPDLCDAHPEVQVA------EPLFLSYGGHAAFCGAIVTVSCFEDNARVRELAATPGAG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RV+VVDG GSLR ++LG A NGWA ++++GC+RDV+ + +GV+ALA+ P K
Sbjct: 58 RVIVVDGQGSLRRSLLGDQIADNAVRNGWAVLLLHGCVRDVEALAALPLGVQALAACPRK 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++G+GE VP+ G G WLYAD +G+L++ L
Sbjct: 118 TERRGLGEVDVPLQFAGVAFVPGHWLYADRNGVLVAAQAL 157
>gi|50084569|ref|YP_046079.1| ribonuclease activity regulator protein RraA [Acinetobacter sp.
ADP1]
gi|61215916|sp|Q6FCF4.1|RRAAH_ACIAD RecName: Full=Putative regulator of ribonuclease activity
gi|49530545|emb|CAG68257.1| Regulator of ribonuclease activity [Acinetobacter sp. ADP1]
Length = 170
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
Query: 21 ELRALQP-----IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSL 75
+++ L P F+ YG R++FSG IVT+K FEDN ++E L G G+VLVVDGG S+
Sbjct: 20 DIQVLTPSLDGRFFKSYGARKIFSGQIVTVKCFEDNSRVKELLATDGTGKVLVVDGGASM 79
Query: 76 RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHV 135
RCA++G A W G+V+ GCIRDVD + D+G+ ALA+ P K+N++GIGE V
Sbjct: 80 RCALMGDMIAESAVKYHWDGVVIYGCIRDVDALAELDLGIHALAAIPQKSNRQGIGEVGV 139
Query: 136 PITIGGTRISDGEWLYADTDGILISRAEL 164
+ GG G ++YAD +GI++S+ +L
Sbjct: 140 NLYFGGVTFQAGCYIYADNNGIIVSKQKL 168
>gi|386817624|ref|ZP_10104842.1| Regulator of ribonuclease activity A [Thiothrix nivea DSM 5205]
gi|386422200|gb|EIJ36035.1| Regulator of ribonuclease activity A [Thiothrix nivea DSM 5205]
Length = 163
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M TA++ DAN L+ +QP F YG R FSG IVT+K++EDN L+RE + E
Sbjct: 1 MQDFKTADLLDANED----KPLQIVQPGFSNYGGRNKFSGEIVTIKIYEDNSLVRELVAE 56
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGS RCA+LG +A NGW GI+V G IRD +I D+GV++L +
Sbjct: 57 DGKGKVLVVDGGGSTRCALLGDMLAEKAVKNGWNGILVYGLIRDSVDIGQMDLGVKSLGT 116
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P+K+ K+G+G ++ + + G +LY+D DGI++S L
Sbjct: 117 LPLKSVKRGVGLRNEVVRFHDVTFTPGHYLYSDEDGIIVSPVPL 160
>gi|209965633|ref|YP_002298548.1| ribonuclease activity A regulator [Rhodospirillum centenum SW]
gi|226703232|sp|B6IPN3.1|RRAAH_RHOCS RecName: Full=Putative regulator of ribonuclease activity
gi|209959099|gb|ACI99735.1| regulator of ribonuclease activity A [Rhodospirillum centenum SW]
Length = 160
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++ D++ ++ S E + F+ YG R F GPI T++ +DN L++ L G+
Sbjct: 3 IATADLFDSHEDILESCETQ-----FRSYGGRAAFHGPIRTVRCHQDNALLKSLLSTPGD 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDGGGSLR A++G NGWAGIVV+G IRD + I G DIG++AL S+P
Sbjct: 58 GAVLVVDGGGSLRTALVGDLIAGLGVKNGWAGIVVHGAIRDSEAIGGLDIGLKALGSNPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K G GE P+ GG + G WLY+D DG++++ L
Sbjct: 118 KSTKTGAGEADRPVAFGGCTFTPGHWLYSDADGVVVAPRRL 158
>gi|333373515|ref|ZP_08465425.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Desmospora sp. 8437]
gi|332969929|gb|EGK08931.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Desmospora sp. 8437]
Length = 158
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD + + EL+ +PI +G ++ FSGPI T+KV EDNVL+R+ LE
Sbjct: 1 MKTADLCDIHQR-----ELQICEPILTSFGGKKQFSGPIRTVKVLEDNVLVRKALETVPE 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDGGGS +CA++G A + +G+++NGCIRD E+ D+GV ALA P+
Sbjct: 56 GSVLVVDGGGSKKCALMGDRLGEIAVSRNLSGVIINGCIRDSAELAKMDLGVLALAPMPL 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+ K+G GE++V + GG G ++YAD DG++IS +L++
Sbjct: 116 KSKKEGKGEQNVTVKFGGVHWEPGHYVYADEDGVVISPGKLTL 158
>gi|329895300|ref|ZP_08270942.1| Ribonuclease E inhibitor RraA [gamma proteobacterium IMCC3088]
gi|328922422|gb|EGG29765.1| Ribonuclease E inhibitor RraA [gamma proteobacterium IMCC3088]
Length = 162
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 102/160 (63%), Gaps = 6/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P + R L F+ YGR F G VT+K FEDN L++ ++E GNG
Sbjct: 6 TTPDLCDDFP------DSRVLHAQFRSYGRSASFCGQAVTVKCFEDNSLVKALVQEPGNG 59
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+V+VVDGG SLR A+LG +A NGW G+++NG +RDV+ + +GV AL + P+K
Sbjct: 60 KVIVVDGGASLRRALLGDQLAEKACLNGWMGLIINGAVRDVEILATLPLGVFALGAIPLK 119
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+ +G + V + IGGT + +G+W+YAD G+++S L
Sbjct: 120 TDKRDVGLRGVAVDIGGTTVHEGDWIYADASGVVVSSTNL 159
>gi|209693898|ref|YP_002261826.1| ribonuclease activity regulator protein RraA [Aliivibrio
salmonicida LFI1238]
gi|208007849|emb|CAQ77977.1| regulator of ribonuclease activity A [Aliivibrio salmonicida
LFI1238]
Length = 165
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 103/156 (66%), Gaps = 5/156 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G + FSG I T+K FEDN LI + L+EKG GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSHFGAKSSFSGQITTIKCFEDNGLISQLLDEKGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ + +A +NGW G++V GC+R+VD + ++G++ALAS P+ A
Sbjct: 60 ILLIDGGGSLRRALIDADLAAKAAHNGWEGLIVYGCVREVDYLEEIELGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
KK +GE V + G ++LYAD+ GI+IS+
Sbjct: 120 AKKNVGEIDVAVNFGSVTFLPEDYLYADSTGIIISQ 155
>gi|430377374|ref|ZP_19431507.1| ribonuclease activity regulator protein RraA [Moraxella macacae
0408225]
gi|429540511|gb|ELA08540.1| ribonuclease activity regulator protein RraA [Moraxella macacae
0408225]
Length = 168
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++ D NP V + F YG F G +VT+K FEDN ++E L +G G+
Sbjct: 10 TCDLLDDNPNCQVCSPNMEGKRFFS-YGGLSSFGGEVVTVKCFEDNSRVKEMLACQGCGK 68
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S+RCA+LG A NNGW G++V GC+RDVDE+ +GV+AL S P K+
Sbjct: 69 VLVVDGGASMRCALLGDMIAKSALNNGWVGVIVYGCVRDVDELANMTLGVQALGSIPRKS 128
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
N++G+GE V + GG I G+++YAD +GI++S L
Sbjct: 129 NRQGVGEIGVTLQFGGITIEQGQFIYADNNGIIVSNKPL 167
>gi|55981291|ref|YP_144588.1| ribonuclease activity regulator protein RraA [Thermus thermophilus
HB8]
gi|81600404|sp|Q5SIP7.1|RRAAH_THET8 RecName: Full=Putative regulator of ribonuclease activity
gi|55772704|dbj|BAD71145.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Thermus thermophilus HB8]
Length = 164
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 102/154 (66%), Gaps = 6/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++ D P+ GE AL +F+ +G R F+G + TL+VFEDN L+R+ LEE+G G+
Sbjct: 5 TTDLSDLYPE----GE--ALPMVFKSFGGRARFAGRVRTLRVFEDNALVRKVLEEEGAGQ 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL VDGGGSLR A+LGGN A GWAG+VV+G +RD +E+ IG+ ALA+ P K+
Sbjct: 59 VLFVDGGGSLRTALLGGNLARLAWEKGWAGVVVHGAVRDTEELREVPIGLLALAATPKKS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+G GE VP+ + G + G +L AD DG+L+
Sbjct: 119 AKEGKGEVDVPLKVLGVEVLPGSFLLADEDGLLL 152
>gi|261254091|ref|ZP_05946664.1| ribonuclease E inhibitor RraA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417954478|ref|ZP_12597513.1| ribonuclease activity regulator protein RraA [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937482|gb|EEX93471.1| ribonuclease E inhibitor RraA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342815381|gb|EGU50302.1| ribonuclease activity regulator protein RraA [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 171
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K FEDN L+RE LE+ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGSASFAGQITTVKCFEDNGLVREILEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAELASLAEENEWEGIVVYGCVREVDELEDMSIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE VP+ GG ++LYAD G+++S+ L +
Sbjct: 120 TSQGVGEVDVPVNFGGVTFLPEDYLYADNTGVILSQEPLDI 160
>gi|433678466|ref|ZP_20510319.1| ribonuclease activity regulator protein RraA [Xanthomonas
translucens pv. translucens DSM 18974]
gi|430816391|emb|CCP40808.1| ribonuclease activity regulator protein RraA [Xanthomonas
translucens pv. translucens DSM 18974]
Length = 160
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 100/160 (62%), Gaps = 6/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CDA+P++ V+ +P+F+ YG F G IVT+ FEDN +RE G G
Sbjct: 4 TTPDLCDAHPEVQVA------EPLFRSYGGHAAFCGAIVTVSCFEDNARVRELAATPGAG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RV+VVDG GSLR ++LG A NGWAG++++GC+RDV+ + +GV+ALA+ P K
Sbjct: 58 RVIVVDGQGSLRRSLLGDQIAENAVRNGWAGLLLHGCVRDVEALAALPLGVQALAACPRK 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++G+GE VP+ G G LYAD +G+L++ L
Sbjct: 118 TERRGLGEVDVPLRFAGVAFLPGHCLYADRNGVLVAAQAL 157
>gi|226362966|ref|YP_002780748.1| ribonuclease activity regulator protein RraA [Rhodococcus opacus
B4]
gi|226241455|dbj|BAH51803.1| ribonuclease regulator [Rhodococcus opacus B4]
Length = 156
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 104/156 (66%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++ D + E+R+ F +G R+VFSGPI T+K F+DN+L+++ L E GN
Sbjct: 5 VATADLADE-----IGPEIRSCDTQFTQFGGRKVFSGPITTIKCFQDNLLVKQTLGEPGN 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG S+ A++G + +NGWAG++VNG +RD + DIGV+AL ++P
Sbjct: 60 GGVLVVDGDASIHTALVGDIIAGRGVDNGWAGVIVNGAVRDSAILATLDIGVKALGTNPR 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ + G GEK+VPITIGG + GE +Y+D DG+++
Sbjct: 120 KSTQTGSGEKNVPITIGGVTFNPGETVYSDQDGVVV 155
>gi|271969635|ref|YP_003343831.1| ribonuclease activity A regulator [Streptosporangium roseum DSM
43021]
gi|270512810|gb|ACZ91088.1| regulator of ribonuclease activity A [Streptosporangium roseum DSM
43021]
Length = 159
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 101/156 (64%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++ DA+ ++ S + F+ YG R F+GPI T++ EDN L+++ L G G
Sbjct: 4 TTADLIDAHGDVLDSCLTQ-----FRSYGLRPRFAGPIATIRCLEDNALVKQVLTTPGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSLR A++G A ++GW+G+VVNG +RD + G ++G++AL S+P K
Sbjct: 59 RVLVVDGAGSLRTALMGDLIAASAVSSGWSGVVVNGAVRDTVALGGLELGIKALGSNPRK 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+ KKG G+ VP+T G G WLY+D DG+++S
Sbjct: 119 SAKKGAGDLDVPVTFGEVTFVPGAWLYSDEDGLVVS 154
>gi|84623100|ref|YP_450472.1| ribonuclease activity regulator protein RraA [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|122879111|ref|YP_200194.6| ribonuclease activity regulator protein RraA [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|188575697|ref|YP_001912626.1| ribonuclease activity regulator protein RraA [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|123522597|sp|Q2P5H9.1|RRAAH_XANOM RecName: Full=Putative regulator of ribonuclease activity
gi|226703244|sp|B2SSI8.1|RRAAH_XANOP RecName: Full=Putative regulator of ribonuclease activity
gi|84367040|dbj|BAE68198.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188520149|gb|ACD58094.1| regulator of ribonuclease activity A [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 166
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ ++ +P F+ +G R VF GP+VT++ FEDN +RE G+
Sbjct: 4 TTPDLCDRYPEVTIA------EPPFRHFGGRTVFCGPMVTVRCFEDNSRMRELAATPGDA 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++G +RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGGVRDVEMLASLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP++ G G WLYAD +G+L+S LS+
Sbjct: 118 TERRDLGDVDVPVSFAGVPFVPGHWLYADANGVLVSPQPLSL 159
>gi|58425772|gb|AAW74809.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 306
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P++ ++ +P F+ +G R VF GP+VT++ FEDN +RE G+
Sbjct: 144 TTPDLCDRYPEVTIA------EPPFRHFGGRTVFCGPMVTVRCFEDNSRMRELAATPGDA 197
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++G +RDV+ + +GV ALA+ P +
Sbjct: 198 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGGVRDVEMLASLPLGVLALAACPRR 257
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP++ G G WLYAD +G+L+S LS+
Sbjct: 258 TERRDLGDVDVPVSFAGVPFVPGHWLYADANGVLVSPQPLSL 299
>gi|441505754|ref|ZP_20987734.1| Ribonuclease E inhibitor RraA [Photobacterium sp. AK15]
gi|441426484|gb|ELR63966.1| Ribonuclease E inhibitor RraA [Photobacterium sp. AK15]
Length = 161
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD I ++ ++P+F YG R F G + T+K FEDN LIR LEE G G
Sbjct: 4 NTSELCD-----IYLDKVDVVEPMFSSYGGRSSFGGQVTTVKCFEDNGLIRNVLEEPGAG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ + QA NN W G++V GC+R VD+++ D+G++A+AS P+
Sbjct: 59 RVLLIDGGGSLRRALVDADIAQQAVNNDWEGLIVYGCVRHVDDLDEMDLGIQAMASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+++G+GE V + GG + +YAD G+++S L +
Sbjct: 119 ADQQGVGEIDVAVNFGGVTFLPEDHIYADNTGVILSPEPLDI 160
>gi|260774692|ref|ZP_05883596.1| ribonuclease E inhibitor RraA [Vibrio coralliilyticus ATCC BAA-450]
gi|260609348|gb|EEX35499.1| ribonuclease E inhibitor RraA [Vibrio coralliilyticus ATCC BAA-450]
Length = 172
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I S ++ ++P+F +G F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYSEQVDVVEPMFSNFGGSASFAGQITTVKCFEDNGLIREVLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W G+VV GC+R+VDE+ IG++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAELASLAEENEWEGLVVYGCVREVDELEDMSIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GE VP+ GG ++LYAD G+++S+ L V
Sbjct: 120 VSQSVGEVDVPVNFGGVTFIPEDYLYADNTGVILSQEPLDV 160
>gi|357403780|ref|YP_004915704.1| ribonuclease activity A regulator [Methylomicrobium alcaliphilum
20Z]
gi|351716445|emb|CCE22105.1| Regulator of ribonuclease activity A [Methylomicrobium alcaliphilum
20Z]
Length = 161
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 3/161 (1%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++CD + + PIF+I+G F G I T+K FEDN L+ L K +
Sbjct: 4 TTADLCDKYSGI---NGFQIADPIFRIFGATPAFCGQITTIKAFEDNGLVESTLSTKVSR 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGS RCA++ A +NGW GI V GCIR+ I+ IG+RAL HP+K
Sbjct: 61 RVLVVDGGGSHRCALIDRELAQLAYDNGWQGIAVYGCIRNAAAIDTIPIGIRALHPHPLK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+ KG GE+ +T G + +LYAD+DGI++S ELS
Sbjct: 121 STTKGHGEQDGIVTFAGVQFRKDYFLYADSDGIIVSETELS 161
>gi|399545518|ref|YP_006558826.1| ribonuclease activity regulator protein RraA [Marinobacter sp.
BSs20148]
gi|399160850|gb|AFP31413.1| ribonuclease activity regulator protein RraA [Marinobacter sp.
BSs20148]
Length = 174
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
VTT ++CD P E++ ++P F+ +G F G IVT+K FEDN ++++ + G+
Sbjct: 19 VTTPDLCDEFP------EVQVVEPGFRNFGAIDNFGGEIVTVKCFEDNSVVKQQVGLPGH 72
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRV+VVDGGGS R A+LG +A +NGWAG+++ GCIRD D I +GV+AL +HP
Sbjct: 73 GRVMVVDGGGSKRNALLGDILAEKAASNGWAGLIIYGCIRDADVIAKTPLGVQALGTHPR 132
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K K+ +G+ ++ +T GG G +LYAD +GI++S L
Sbjct: 133 KTEKRDVGDLNIAVTFGGVTFHPGHFLYADNNGIIVSEKAL 173
>gi|381172252|ref|ZP_09881384.1| RraA family protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|380687297|emb|CCG37871.1| RraA family protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 166
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 101/162 (62%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CD P +++ +P+F+ +G R F+GP+ T++ FEDN +RE G+G
Sbjct: 4 TMPDLCDRYPDTMIA------EPLFRHFGGRTAFAGPLATVRCFEDNSRVRELAATPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ VP+ G G WLYAD +G+L++ L++
Sbjct: 118 TERRDLGDVDVPVNFAGVPFVPGHWLYADANGVLVAPQPLAL 159
>gi|59710818|ref|YP_203594.1| ribonuclease activity regulator protein RraA [Vibrio fischeri
ES114]
gi|423684931|ref|ZP_17659739.1| ribonuclease activity regulator protein RraA [Vibrio fischeri SR5]
gi|59478919|gb|AAW84706.1| ribonuclease E (RNase E) inhibitor protein [Vibrio fischeri ES114]
gi|371495978|gb|EHN71572.1| ribonuclease activity regulator protein RraA [Vibrio fischeri SR5]
Length = 165
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 102/156 (65%), Gaps = 5/156 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G + FSG I T+K FEDN LI + LEEKG GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSHFGAKTSFSGQITTIKCFEDNGLIHQLLEEKGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ + +A +NGW G+V+ GC+R+VD + +IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALVDADLAAKAAHNGWEGLVIYGCVREVDYLEEIEIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
++ IGE V + G + LYAD+ G++IS+
Sbjct: 120 ARQNIGEVDVAVNFGSVTFLPEDHLYADSTGVIISQ 155
>gi|197333998|ref|YP_002154973.1| ribonuclease activity regulator protein RraA [Vibrio fischeri MJ11]
gi|197315488|gb|ACH64935.1| regulator of ribonuclease activity A [Vibrio fischeri MJ11]
Length = 166
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 102/156 (65%), Gaps = 5/156 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G + FSG I T+K FEDN LI + LEEKG GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSHFGAKTSFSGQITTIKCFEDNGLIHQLLEEKGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ + +A +NGW G+V+ GC+R+VD + +IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALVDADLAAKAAHNGWEGLVIYGCVREVDYLEEIEIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
++ IGE V + G + LYAD+ G++IS+
Sbjct: 120 ARQNIGEVDVAVNFGSVTFLPEDHLYADSTGVIISQ 155
>gi|384431504|ref|YP_005640864.1| Regulator of ribonuclease activity A [Thermus thermophilus
SG0.5JP17-16]
gi|333966972|gb|AEG33737.1| Regulator of ribonuclease activity A [Thermus thermophilus
SG0.5JP17-16]
Length = 164
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 101/154 (65%), Gaps = 6/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++ D P+ GE AL +F+ +G R F+G + TL+VFEDN L+R+ LEE G G+
Sbjct: 5 TTDLSDLYPE----GE--ALPMVFKSFGGRARFAGRVRTLRVFEDNALVRKVLEEGGAGQ 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL VDGGGSLR A+LGGN A GWAG+VV+G +RD +E+ IG+ ALA+ P K+
Sbjct: 59 VLFVDGGGSLRTALLGGNLARLAWEKGWAGVVVHGAVRDAEELREVPIGLLALAATPKKS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+G GE VP+ + G + G +L AD DG+L+
Sbjct: 119 AKEGKGEVDVPLKVLGVEVLPGSFLLADEDGLLL 152
>gi|163803562|ref|ZP_02197430.1| ribonuclease activity regulator protein RraA [Vibrio sp. AND4]
gi|159172649|gb|EDP57505.1| ribonuclease activity regulator protein RraA [Vibrio sp. AND4]
Length = 168
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G R F+G +VT+K FEDN LIRE LE+ G G
Sbjct: 4 NTSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQVVTIKCFEDNALIRETLEQDGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDAEIATLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE V + GG +++YAD+ GI++S L+V
Sbjct: 119 GGNQGVGEIDVAVNFGGVSFLPEDYIYADSTGIILSPEPLNV 160
>gi|300721286|ref|YP_003710557.1| methyltransferase in menaquinone biosynthesis [Xenorhabdus
nematophila ATCC 19061]
gi|297627774|emb|CBJ88305.1| putative methyltransferase protein in menaquinone biosynthesis
[Xenorhabdus nematophila ATCC 19061]
Length = 190
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LEE G+GR
Sbjct: 28 TSELCD-----IYQEDINVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEENGHGR 82
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A NN W GIVV G +R VD ++ DIG++A+A+ P +
Sbjct: 83 ILLVDGGGSVRKALVDAELAQLAANNEWEGIVVYGAVRQVDYLSELDIGIQAMAAIPAGS 142
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
N +G+GE + + GG G++LYAD GI++S L +
Sbjct: 143 NSEGVGESDIRVNFGGVTFFSGDYLYADNTGIVLSDVPLEL 183
>gi|308803933|ref|XP_003079279.1| COG0684: Demethylmenaquinone methyltransferase (ISS) [Ostreococcus
tauri]
gi|116057734|emb|CAL53937.1| COG0684: Demethylmenaquinone methyltransferase (ISS) [Ostreococcus
tauri]
Length = 196
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 108/169 (63%), Gaps = 8/169 (4%)
Query: 6 TAEVCDAN-PQLI------VSGELR-ALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREF 57
T+++CD + P L+ + +R A + YG + F G + T+ FE+N L+R
Sbjct: 28 TSDICDVHHPGLVDDVIGTSASRVRVARANALKDYGGLRRFRGEVSTVLCFENNPLVRLA 87
Query: 58 LEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRA 117
LEE G GRVLVVDGGGS RCA+LG N A NGW+G++VNGC+RD ++I ++GV+A
Sbjct: 88 LEEPGLGRVLVVDGGGSERCALLGDNLAETAARNGWSGVIVNGCVRDSEDIAKFNVGVKA 147
Query: 118 LASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +HP+K++K+ G + VP+T G G ++YAD DGI++S +L +
Sbjct: 148 IGTHPLKSSKRDPGLRDVPVTFAGVTFVPGSYVYADADGIVVSPEKLEI 196
>gi|145344854|ref|XP_001416939.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577165|gb|ABO95232.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 136
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 92/136 (67%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
F+ +G R+ F G + T+ +E+N L+R LEE G GRVLVVDGG S RCA+LG N A
Sbjct: 1 FKDFGGRRRFHGEVTTVSCYENNPLVRAALEEPGRGRVLVVDGGASTRCALLGDNLAEMA 60
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
NGW+GI+VNGC+RD ++I D+GV+A+ +HP+K++K+ G + ++ G G
Sbjct: 61 ATNGWSGIIVNGCVRDSEDIARFDVGVKAIGTHPLKSSKRDPGRRDARVSFAGVDFEPGS 120
Query: 149 WLYADTDGILISRAEL 164
++YAD DG++++ +L
Sbjct: 121 YVYADADGVVVAAKKL 136
>gi|254509348|ref|ZP_05121436.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus 16]
gi|219547713|gb|EED24750.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus 16]
Length = 171
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGCASFAGQITTVKCFEDNGLIREILEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIV GC+R+VDE+ IG+ ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAELATLAEENDWEGIVAYGCVREVDELEDLSIGIHALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE VP+ GG ++LYAD G+++S+ L +
Sbjct: 120 TSQGVGEVDVPVNFGGVTFLPEDYLYADNTGVILSQEPLDI 160
>gi|374336423|ref|YP_005093110.1| ribonuclease activity regulator protein RraA [Oceanimonas sp. GK1]
gi|372986110|gb|AEY02360.1| ribonuclease activity regulator protein RraA [Oceanimonas sp. GK1]
Length = 163
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 102/158 (64%), Gaps = 5/158 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD + L+ R L P+F+ +G +F G VT++ +EDN +RE + E G G+VL
Sbjct: 7 DLCDEHADLV-----RMLDPVFRDFGGESLFWGQAVTVRCYEDNSRVRELVSEPGTGKVL 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
VVDGGG LRCA++G +A NGW GIV++G +RD + +G++ALA+ P+++ K
Sbjct: 62 VVDGGGLLRCALMGDMLAEKALENGWEGIVIHGAVRDAGTLGELALGIKALAACPIRSEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G G VP+T G I G+++Y+D +G+L+SR LS
Sbjct: 122 RGEGVVDVPVTFAGVTIYPGDYIYSDLNGVLVSREPLS 159
>gi|114563381|ref|YP_750894.1| ribonuclease activity regulator protein RraA [Shewanella
frigidimarina NCIMB 400]
gi|114334674|gb|ABI72056.1| regulator of ribonuclease activity A [Shewanella frigidimarina
NCIMB 400]
Length = 164
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 98/146 (67%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L L ++ +G + +F G +VT+K FEDN ++ L +KG+G+VLVVDGGGS R A+L
Sbjct: 15 QLTLLSNPWKAFGAKSIFYGEVVTVKCFEDNSKVKSELAKKGHGKVLVVDGGGSTRRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + A +NGW GI++NGCIRD IN IGV+AL ++P+K +KK +GE +V I I
Sbjct: 75 GDMIALNACDNGWEGIIINGCIRDAGTINTMPIGVQALGTNPIKTDKKDVGEVNVTIEIA 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G IS G +YAD +G+ +SR L +
Sbjct: 135 GISISPGMMIYADLNGVAVSRQALDL 160
>gi|78048524|ref|YP_364699.1| ribonuclease activity regulator protein RraA [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|123584604|sp|Q3BRB4.1|RRAAH_XANC5 RecName: Full=Putative regulator of ribonuclease activity
gi|78036954|emb|CAJ24653.1| regulator of ribonuclease activity A [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 166
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++CD P + ++ +P+F+ +G R F+GP+VT++ FEDN +RE G+G
Sbjct: 4 TTPDLCDRYPDVTIA------EPLFRHFGGRTAFAGPMVTVRCFEDNSRVRELSAMPGDG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P +
Sbjct: 58 RVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +G+ V + G G WLYAD +G+L++ L++
Sbjct: 118 TERRDLGDVDVAVNFAGVPFVPGHWLYADANGVLVAPQPLAL 159
>gi|410663211|ref|YP_006915582.1| ribonuclease activity regulator protein RraA [Simiduia agarivorans
SA1 = DSM 21679]
gi|409025568|gb|AFU97852.1| ribonuclease activity regulator protein RraA [Simiduia agarivorans
SA1 = DSM 21679]
Length = 163
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 91/155 (58%), Gaps = 5/155 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T ++ D P I R L PIFQ +G F G ++T++ FEDN ++ E G G
Sbjct: 7 STPDIADQFPDAI-----RVLHPIFQCFGGHTAFCGEVITVRCFEDNSRVKALASEPGAG 61
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RV+VVDG GSLR A+LG A NGWAG V+NGC+RDV+ + +GVRAL + P+K
Sbjct: 62 RVMVVDGAGSLRRALLGDQIAANALKNGWAGFVINGCVRDVEILKTLPLGVRALHACPVK 121
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K GE +V I G G++LYAD GILI
Sbjct: 122 TEKLDRGETNVTIAFAGVEFKSGQYLYADQSGILI 156
>gi|260770844|ref|ZP_05879773.1| ribonuclease E inhibitor RraA [Vibrio furnissii CIP 102972]
gi|375129715|ref|YP_004991813.1| ribonuclease activity regulator protein RraA [Vibrio furnissii NCTC
11218]
gi|260614081|gb|EEX39271.1| ribonuclease E inhibitor RraA [Vibrio furnissii CIP 102972]
gi|315178887|gb|ADT85801.1| ribonuclease activity regulator protein RraA [Vibrio furnissii NCTC
11218]
Length = 178
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G + T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQVTTIKCFEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALVDAELAAIAEENEWEGIVVYGCVREVDELEDMSIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE VP+ GG ++LYAD GI++S+ L+
Sbjct: 120 PAQGIGEVDVPVNFGGVTFLPEDYLYADNTGIILSQEPLN 159
>gi|307111875|gb|EFN60109.1| hypothetical protein CHLNCDRAFT_133452 [Chlorella variabilis]
Length = 186
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Query: 6 TAEVCDANP---QLIVSGELRALQP-IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
T E+CD + + + ++P + + +G R F G +T+K +E NVLI + L+
Sbjct: 22 TTELCDQHMGPVDCVDDAGITIMEPGLLRDFGGRIRFHGQAMTVKCYESNVLISQLLDSP 81
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G+GRVLVVDGGGS RCA+LG A NGWAG++V+GC+RD + ++G++ALA
Sbjct: 82 GHGRVLVVDGGGSRRCALLGDRLAGLAAKNGWAGVIVHGCVRDTAALGEIEVGIKALAPC 141
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P+K++K+ G K V + IGG + G+W+YAD DG+L+SR L
Sbjct: 142 PLKSSKRDPGLKAVRVVIGGALVRPGDWVYADEDGVLVSREAL 184
>gi|152996093|ref|YP_001340928.1| ribonuclease activity A regulator [Marinomonas sp. MWYL1]
gi|189044038|sp|A6VX14.1|RRAAH_MARMS RecName: Full=Putative regulator of ribonuclease activity
gi|150837017|gb|ABR70993.1| regulator of ribonuclease activity A [Marinomonas sp. MWYL1]
Length = 161
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 101/159 (63%), Gaps = 5/159 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD P+ +L+ +PIF YG+R F G +VT+ FEDN +RE + E G G+V+
Sbjct: 7 DLCDLYPE-----KLQIAEPIFTSYGKRSHFYGEVVTVSCFEDNSRVRELVAENGKGKVM 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
V+DGGGS R A+LG +A +NGW G V+NG IRD+ + +IG+ AL +HPM K
Sbjct: 62 VIDGGGSKRRALLGDMLAEKAVDNGWEGFVINGAIRDIAAQSQLNIGIHALCAHPMPTEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+G+ + G I+ G+++Y D +GI++S+ L++
Sbjct: 122 RGLGDLGKTLRFAGMTIAQGDYIYCDLNGIVVSKQPLAL 160
>gi|343508322|ref|ZP_08745669.1| ribonuclease activity regulator protein RraA [Vibrio ichthyoenteri
ATCC 700023]
gi|342794283|gb|EGU30058.1| ribonuclease activity regulator protein RraA [Vibrio ichthyoenteri
ATCC 700023]
Length = 170
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 101/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K FEDN +IRE LE+ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGSASFAGQITTVKCFEDNGIIREILEQDGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALVDAEIAALAEENEWEGIVVYGCVREVDELEDMSIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KG GE V + GG ++LYAD G+++S+ L++
Sbjct: 120 TSKGEGETDVAVNFGGVTFLPEDYLYADNTGVILSQEPLNI 160
>gi|330447103|ref|ZP_08310753.1| regulator of ribonuclease activity A [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491294|dbj|GAA05250.1| regulator of ribonuclease activity A [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 161
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 103/162 (63%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD I ++ ++P+F YG R F G I T+K FEDN +IRE LE+ G G
Sbjct: 4 NTSELCD-----IYLEQVDVVEPMFSSYGGRSSFGGQITTVKCFEDNGVIREVLEQPGAG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGSLR A++ + AQ N W G++V GC+R VDE++ D+G++ALAS P+
Sbjct: 59 RVLLVDGGGSLRRALIDIDLAHLAQENEWEGLIVYGCVRHVDELDELDLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+++ IGE V + GG + +YAD G+++S L +
Sbjct: 119 ADQRDIGEVDVAVNFGGVTFLPEDHIYADNTGVILSPEPLDI 160
>gi|229492215|ref|ZP_04386023.1| regulator of ribonuclease activity A [Rhodococcus erythropolis
SK121]
gi|453073173|ref|ZP_21976126.1| ribonuclease activity regulator protein RraA [Rhodococcus
qingshengii BKS 20-40]
gi|226182677|dbj|BAH30781.1| putative ribonuclease regulator [Rhodococcus erythropolis PR4]
gi|229320841|gb|EEN86654.1| regulator of ribonuclease activity A [Rhodococcus erythropolis
SK121]
gi|452756484|gb|EME14898.1| ribonuclease activity regulator protein RraA [Rhodococcus
qingshengii BKS 20-40]
Length = 158
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 104/159 (65%), Gaps = 5/159 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++ D + ++R+ F +G R+VF+GPI T+K F+DN+L+++ L E GN
Sbjct: 5 VATADLADE-----IGPDIRSCDTQFTQFGGREVFAGPITTIKCFQDNLLVKQTLSEPGN 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG S+ A++G + +NGWAG++VNG +RD + DIGV+AL ++P
Sbjct: 60 GGVLVVDGDASIHTALVGDIIAGRGVDNGWAGVIVNGAVRDSAILRTLDIGVKALGTNPR 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRA 162
K+ + G GEK+VPI IGG + GE +Y+D DG+++ +
Sbjct: 120 KSTQTGSGEKNVPIEIGGVTFNPGEIVYSDQDGVVVRES 158
>gi|389873122|ref|YP_006380541.1| ribonuclease activity A regulator [Advenella kashmirensis WT001]
gi|388538371|gb|AFK63559.1| ribonuclease activity A regulator [Advenella kashmirensis WT001]
Length = 165
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 6/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+A + T ++ D +P L + F+++GR++ +G + T+KV+EDN IR+ L E
Sbjct: 6 LAALITCDIMDQHP------SLPSCDTQFRLFGRKRAIAGQVRTVKVYEDNTFIRQVLSE 59
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G VLVVD SL CA++G Q+NGW+GI+V G IRD ++I+ D V+AL +
Sbjct: 60 PGQGAVLVVDAAASLHCAVVGDMIAKLGQDNGWSGIIVYGAIRDSEQIDAMDFCVKALGT 119
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+P K+ K +G VP+T G R G++LY+D DGI++S L
Sbjct: 120 NPRKSGKNSLGLIDVPVTFGNVRFVPGQYLYSDADGIVLSEQAL 163
>gi|392377778|ref|YP_004984937.1| ribonuclease E (RNase E) inhibitor protein [Azospirillum brasilense
Sp245]
gi|356879259|emb|CCD00163.1| ribonuclease E (RNase E) inhibitor protein [Azospirillum brasilense
Sp245]
Length = 165
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 93/141 (65%)
Query: 23 RALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGG 82
R P+F+ +GRR FSG VT+K FEDN ++E L G G+VLVVDGGG LR A++G
Sbjct: 19 RVADPVFRDFGRRCKFSGAAVTVKCFEDNSRVKELLGTPGRGKVLVVDGGGGLRAALMGD 78
Query: 83 NPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGT 142
A NGW G+V++GC+RD + D+G++ALA+ P K + G G+K +P+T+ G
Sbjct: 79 LIAKDAVKNGWEGVVIHGCVRDAAVLATLDLGIKALAAIPRKTVRNGEGQKDLPVTLAGI 138
Query: 143 RISDGEWLYADTDGILISRAE 163
RI+ G+ ++AD DG+L+ E
Sbjct: 139 RINPGDLVFADEDGVLVLTPE 159
>gi|149189187|ref|ZP_01867474.1| ribonuclease activity regulator protein RraA [Vibrio shilonii AK1]
gi|148836941|gb|EDL53891.1| ribonuclease activity regulator protein RraA [Vibrio shilonii AK1]
Length = 170
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+ +CD I ++ ++P+F +G R F+G I ++K FEDN +IRE LE+ G G
Sbjct: 4 STSALCD-----IYLDQVDVVEPMFSNFGGRASFAGQITSVKCFEDNGVIREILEQDGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
R+L++DGGGSLR A++ A++N W GI+V GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RILLIDGGGSLRKALIDAEIAQLAEDNEWEGIIVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A + +GE VP+ GG +++YAD G+++S+ L V
Sbjct: 119 AAQSNVGEVDVPVNFGGVTFLPEDYVYADNTGVILSQEPLDV 160
>gi|260772035|ref|ZP_05880952.1| ribonuclease E inhibitor RraA [Vibrio metschnikovii CIP 69.14]
gi|260612902|gb|EEX38104.1| ribonuclease E inhibitor RraA [Vibrio metschnikovii CIP 69.14]
Length = 172
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ L+P+F +G R F+G + T+K FEDN LIRE LE+ G G
Sbjct: 4 NTSALCD-----IYLEQVDVLEPMFSNFGGRASFAGQVTTIKCFEDNGLIREVLEQDGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ +G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDAELAAIAEENEWEGIVVYGCVREVDELEEMSVGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A GIGE V + GG ++LYAD G+++S L+V
Sbjct: 119 AVSLGIGEIDVAVNFGGVTFLPEDYLYADNTGVILSPEPLNV 160
>gi|422293323|gb|EKU20623.1| regulator of ribonuclease activity a, partial [Nannochloropsis
gaditana CCMP526]
Length = 180
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD + + + A F +G+ F G IVT+K FE+N L+R L E G GR
Sbjct: 23 TADLCDDHEHRLQVADGNA----FHSFGQHSSFCGEIVTIKCFENNPLVRATLSEPGEGR 78
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+ G N A NGWAG+V+ G IRD IN +GV+AL ++P+K+
Sbjct: 79 VLVVDGGGSLRRALFGDNIAALAVKNGWAGVVIYGAIRDSAVINTMPLGVKALGTNPVKS 138
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ G+++V +T G G ++Y+D+DGI++S L
Sbjct: 139 AKQHPGDRNVVVTFAGVTFKPGHYVYSDSDGIIVSETPL 177
>gi|170719012|ref|YP_001783439.1| ribonuclease activity regulator protein RraA [Haemophilus somnus
2336]
gi|189044037|sp|B0UV42.1|RRAA_HAES2 RecName: Full=Regulator of ribonuclease activity A
gi|168827141|gb|ACA32512.1| Ribonuclease E inhibitor RraA [Haemophilus somnus 2336]
Length = 166
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAE+CD I ++ ++PIF +G + F G I T+K FE+N LI E LEE G
Sbjct: 3 IDTAELCD-----IYLDQIDVVEPIFSSFGGKSTFFGKITTIKCFENNGLISEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ N A +NGW GI+V G IR + ++ +IG++ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALIDANLAQLAADNGWEGIIVYGAIRQLQQLENINIGIQALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++++ IGE VP+ GG +++YAD GI++S+ L +
Sbjct: 118 GSDEQSIGETDVPVNFGGVTFFPDDYIYADLTGIILSQEPLDL 160
>gi|307111722|gb|EFN59956.1| hypothetical protein CHLNCDRAFT_133045 [Chlorella variabilis]
Length = 249
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 92/145 (63%), Gaps = 1/145 (0%)
Query: 23 RALQPIFQIYGRRQVFSGPIVTLKVFED-NVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
+ L P F+ +G + F G + T+++ D N L+R L+E G GRVLVVD G S+RCA LG
Sbjct: 89 QVLHPDFRNFGGGRTFYGRVTTMRLTRDSNTLLRTVLQEDGTGRVLVVDNGASMRCACLG 148
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
A +GWAGIVVNGC+RDV ++ +G++ALAS+PMK K G P+ +GG
Sbjct: 149 DVLATLAHKSGWAGIVVNGCVRDVAQVARIPVGIQALASNPMKPGKGAPGLVDAPVDVGG 208
Query: 142 TRISDGEWLYADTDGILISRAELSV 166
I G WL+AD DGIL+S +L +
Sbjct: 209 VTIRPGNWLFADEDGILVSPEQLPL 233
>gi|403509022|ref|YP_006640660.1| putative regulator of ribonuclease activity [Nocardiopsis alba ATCC
BAA-2165]
gi|402798418|gb|AFR05828.1| putative regulator of ribonuclease activity [Nocardiopsis alba ATCC
BAA-2165]
Length = 160
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++ D + LR+ F+ YG VFSGPI T++ EDN L++ L G G
Sbjct: 6 TTADLIDDHGD-----TLRSCSTQFRRYGGHDVFSGPIRTVRCHEDNGLVKRILATPGEG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLVVDG GSLR A++G A NGWAG+VVNG +RD + G ++GV+AL S+P K
Sbjct: 61 AVLVVDGNGSLRTALMGDMIAASAVENGWAGVVVNGAVRDTVALAGLELGVKALGSNPRK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ K G VP+T G GEWLY+D DGI+++ L
Sbjct: 121 SLKDAAGRADVPVTFGDVTFVPGEWLYSDHDGIVVNATRL 160
>gi|424859640|ref|ZP_18283622.1| ribonuclease activity regulator protein RraA [Rhodococcus opacus
PD630]
gi|356661084|gb|EHI41416.1| ribonuclease activity regulator protein RraA [Rhodococcus opacus
PD630]
Length = 159
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 103/156 (66%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++ D + ++R+ F +G R+VFSGPI T+K F+DN+L+++ L E GN
Sbjct: 8 VATADLADE-----IGPDIRSCDTQFIQFGGREVFSGPITTIKCFQDNLLVKQTLGEPGN 62
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG S+ A++G + +NGWAG++VNG +RD + DIGV+AL ++P
Sbjct: 63 GGVLVVDGDASIHTALVGDIIAGRGVDNGWAGVIVNGAVRDSAILKTLDIGVKALGTNPR 122
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ + G GEK+VPI IGG + GE +Y+D DG+++
Sbjct: 123 KSTQTGSGEKNVPIEIGGVTFNPGETVYSDQDGVVV 158
>gi|111020722|ref|YP_703694.1| ribonuclease activity regulator protein RraA [Rhodococcus jostii
RHA1]
gi|432335505|ref|ZP_19587088.1| ribonuclease activity regulator protein RraA [Rhodococcus
wratislaviensis IFP 2016]
gi|110820252|gb|ABG95536.1| possible S-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Rhodococcus jostii RHA1]
gi|430777577|gb|ELB92917.1| ribonuclease activity regulator protein RraA [Rhodococcus
wratislaviensis IFP 2016]
Length = 156
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 103/156 (66%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++ D + ++R+ F +G R+VFSGPI T+K F+DN+L+++ L E GN
Sbjct: 5 VATADLADE-----IGPDIRSCDTQFIQFGGREVFSGPITTIKCFQDNLLVKQTLGEPGN 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG S+ A++G + +NGWAG++VNG +RD + DIGV+AL ++P
Sbjct: 60 GGVLVVDGDASIHTALVGDIIAGRGVDNGWAGVIVNGAVRDSAILKTLDIGVKALGTNPR 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ + G GEK+VPI IGG + GE +Y+D DG+++
Sbjct: 120 KSTQTGSGEKNVPIEIGGVTFNPGETVYSDQDGVVV 155
>gi|113460366|ref|YP_718427.1| ribonuclease activity regulator protein RraA [Haemophilus somnus
129PT]
gi|123031166|sp|Q0I1S4.1|RRAA_HAES1 RecName: Full=Regulator of ribonuclease activity A
gi|112822409|gb|ABI24498.1| regulator of ribonuclease activity A [Haemophilus somnus 129PT]
Length = 166
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TAE+CD I ++ ++PIF +G + F G I T+K FE+N LI E LEE G
Sbjct: 3 IDTAELCD-----IYLDQIDVVEPIFSSFGGKSTFFGKITTIKCFENNGLISEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ N A +NGW GI+V G IR + ++ +IG++ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALIDANLAQLAADNGWEGIIVYGAIRQLQQLENINIGIQALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++++ IGE VP+ GG +++YAD GI++S+ L +
Sbjct: 118 GSDEQSIGETDVPVNFGGVTFFPDDYVYADLTGIILSQEPLDL 160
>gi|336316005|ref|ZP_08570909.1| regulator of ribonuclease activity A [Rheinheimera sp. A13L]
gi|335879711|gb|EGM77606.1| regulator of ribonuclease activity A [Rheinheimera sp. A13L]
Length = 161
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD +I ++PIF YG R+ F G I T+K FEDN LIR+ L E G G
Sbjct: 4 NTSELCDLYADMI-----DVVEPIFANYGGRRSFGGTIQTIKCFEDNGLIRQALAEPGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGS R A++ G A NGW GIV G +RDVD + DIG++A+ + P+
Sbjct: 59 KVLLVDGGGSARRALIDGELASLAATNGWEGIVCYGSVRDVDTLEDFDIGIQAVNAIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +G GE +P+ GG G+ LYAD GI++S L +
Sbjct: 119 ADDRGFGEHEIPVNFGGVTFLPGDHLYADNTGIILSPEPLDL 160
>gi|87121817|ref|ZP_01077703.1| hypothetical protein MED121_00795 [Marinomonas sp. MED121]
gi|86162846|gb|EAQ64125.1| hypothetical protein MED121_00795 [Marinomonas sp. MED121]
Length = 163
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 96/140 (68%)
Query: 27 PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVV 86
PIF YG++ +F G +V++K FEDN ++E + G G+V+VVDGGGS R A+LG
Sbjct: 21 PIFNSYGKKNIFYGEVVSVKCFEDNSRVKELVATPGKGKVMVVDGGGSKRVALLGDMLAE 80
Query: 87 QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISD 146
QA +NGW GI++ G +RDV + D+GV+ALA+ P+++ +KG+GE I G RI +
Sbjct: 81 QAASNGWEGIIIYGAVRDVATQSTIDLGVKALAATPLRSMRKGMGEVGENIAFAGLRIEN 140
Query: 147 GEWLYADTDGILISRAELSV 166
G+++YAD +GI +++ L++
Sbjct: 141 GDYIYADLNGIALAKQPLAL 160
>gi|343512723|ref|ZP_08749842.1| ribonuclease activity regulator protein RraA [Vibrio scophthalmi
LMG 19158]
gi|343516293|ref|ZP_08753333.1| ribonuclease activity regulator protein RraA [Vibrio sp. N418]
gi|342794683|gb|EGU30441.1| ribonuclease activity regulator protein RraA [Vibrio scophthalmi
LMG 19158]
gi|342796496|gb|EGU32174.1| ribonuclease activity regulator protein RraA [Vibrio sp. N418]
Length = 170
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 101/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K FEDN +IRE LE+ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGSASFAGQITTVKCFEDNGIIREILEQDGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALVDAEIAALAEENEWEGIVVYGCVREVDELEDMSIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KG GE V + GG ++LYAD G+++S+ L++
Sbjct: 120 TGKGEGETDVAVNFGGVTFLPEDYLYADNTGVILSQEPLNI 160
>gi|429094049|ref|ZP_19156606.1| Ribonuclease E inhibitor RraA [Cronobacter dublinensis 1210]
gi|429098940|ref|ZP_19161046.1| Ribonuclease E inhibitor RraA [Cronobacter dublinensis 582]
gi|426285280|emb|CCJ87159.1| Ribonuclease E inhibitor RraA [Cronobacter dublinensis 582]
gi|426740984|emb|CCJ82719.1| Ribonuclease E inhibitor RraA [Cronobacter dublinensis 1210]
Length = 161
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGIVVYGAVRQVDDLAELDVGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|421496124|ref|ZP_15943369.1| ribonuclease activity regulator protein RraA [Aeromonas media WS]
gi|407185020|gb|EKE58832.1| ribonuclease activity regulator protein RraA [Aeromonas media WS]
Length = 162
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 96/143 (67%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
L+ +P+F YG + +F G VTL FEDN L+RE + G+G+V+V+DGGGSLR A+LG
Sbjct: 19 LQVAEPLFHDYGGKPLFYGEAVTLSCFEDNSLVRELVASPGHGKVMVIDGGGSLRRALLG 78
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
++A GW GI+++G +RDV + +GV+ALA+ P+K K+G GE V ++ G
Sbjct: 79 DQLAIKAVEQGWEGILIHGAVRDVGTLATLALGVKALAACPVKTEKRGQGELDVVLSFAG 138
Query: 142 TRISDGEWLYADTDGILISRAEL 164
I+ G+++YAD +G+L+S A L
Sbjct: 139 VSIAPGDYVYADLNGVLVSGARL 161
>gi|358410464|gb|AEU09894.1| ribonuclease activity regulator protein RraA [Photobacterium
damselae subsp. piscicida]
Length = 161
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD I ++ ++P+F YG R F G I T+K FEDN ++R LE+ G G
Sbjct: 4 NTSELCD-----IYLDQVDVVEPMFNSYGGRGSFGGQITTVKCFEDNGVLRSVLEQSGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGSLR A++ + A N W GIVV GC+R VDE++ D+G++ALAS P+
Sbjct: 59 RVLLVDGGGSLRRALIDIDIAQLAAENEWEGIVVYGCVRHVDELDELDLGIQALASMPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ + +GE VP+ GG + LYAD G+++S L +
Sbjct: 119 ADNQSVGEVDVPVNFGGVTFLPEDHLYADNTGVILSPEPLEL 160
>gi|269103956|ref|ZP_06156653.1| ribonuclease E inhibitor RraA [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163854|gb|EEZ42350.1| ribonuclease E inhibitor RraA [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 161
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD I ++ ++P+F YG R F G I T+K FEDN ++R LE+ G G
Sbjct: 4 NTSELCD-----IYLDQVDVVEPMFNSYGGRGSFGGQITTVKCFEDNGVLRSVLEQSGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGSLR A++ + A N W GIVV GC+R VDE++ D+G++ALAS P+
Sbjct: 59 RVLLVDGGGSLRRALIDIDIAQLAAENEWEGIVVYGCVRHVDELDELDLGIQALASMPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ + +GE VP+ GG + LYAD G+++S L +
Sbjct: 119 ADNQSVGEVDVPVNFGGVTFLPEDHLYADNTGVILSPEPLDL 160
>gi|365538451|ref|ZP_09363626.1| ribonuclease activity regulator protein RraA [Vibrio ordalii ATCC
33509]
Length = 173
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G + T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGIASFAGQLTTIKCFEDNGLIREVLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W G+VV GC+R+VDE+ IG++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAELAALAEENEWEGVVVYGCVREVDELEEMSIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE V + G ++LYAD GI++S+ L+V
Sbjct: 120 STQGIGEVDVAVNFGSVTFLPEDYLYADNTGIILSQEPLNV 160
>gi|261420012|ref|YP_003253694.1| ribonuclease activity regulator protein RraA [Geobacillus sp.
Y412MC61]
gi|319766827|ref|YP_004132328.1| ribonuclease activity A regulator [Geobacillus sp. Y412MC52]
gi|261376469|gb|ACX79212.1| regulator of ribonuclease activity A [Geobacillus sp. Y412MC61]
gi|317111693|gb|ADU94185.1| regulator of ribonuclease activity A [Geobacillus sp. Y412MC52]
Length = 161
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 103/162 (63%), Gaps = 5/162 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD Q + EL+ + FQ YG +++FSGPI T+ VFEDNVL+RE LE
Sbjct: 1 MKTADLCD---QFL--DELQVCELPFQSYGGKRMFSGPIATVDVFEDNVLVREALETVPP 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG GS R A+LG A G AG++++GCIRD EI IGV A+ + P+
Sbjct: 56 GTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHGCIRDSAEIGAMPIGVMAIGTCPV 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ K+G G + V + GG R G ++YAD DG++++ +LS
Sbjct: 116 KSKKEGKGSRDVALEFGGVRWEPGAYVYADADGVVVANKDLS 157
>gi|397162728|ref|ZP_10486196.1| regulator of ribonuclease activity A [Enterobacter radicincitans
DSM 16656]
gi|396095642|gb|EJI93184.1| regulator of ribonuclease activity A [Enterobacter radicincitans
DSM 16656]
Length = 161
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEEINVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ + A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSMRRALIDADLARTAVQNEWEGIVVYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|126668120|ref|ZP_01739082.1| ribonuclease activity regulator protein RraA [Marinobacter sp.
ELB17]
gi|126627390|gb|EAZ98025.1| ribonuclease activity regulator protein RraA [Marinobacter sp.
ELB17]
Length = 174
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T ++CD P E++ ++P F+ +G F G IVT+K FEDN ++++ + G
Sbjct: 19 VITPDLCDEFP------EVQVVEPGFRNFGAIDNFGGEIVTVKCFEDNSVVKQQVGLPGL 72
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRV+VVDGGGS R A+LG +A +NGWAG+++ GCIRD D I +GV+AL +HP
Sbjct: 73 GRVMVVDGGGSKRSALLGDMLAEKAASNGWAGLIIYGCIRDADVIAKTALGVQALGTHPR 132
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K K+ +G+ ++ +T GG G ++YAD +GI++S L
Sbjct: 133 KTEKRDVGDLNIAVTFGGVTFHPGHFVYADNNGIIVSEKAL 173
>gi|343499007|ref|ZP_08737012.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii ATCC
19109]
gi|418477063|ref|ZP_13046202.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342823646|gb|EGU58258.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii ATCC
19109]
gi|384575380|gb|EIF05828.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 174
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 100/156 (64%), Gaps = 5/156 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGCASFAGQITTVKCFEDNGLIREILEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++A+AS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAELASLAEENEWEGIVVYGCVREVDELEDMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
+GIGE VP+ GG ++LYAD G+++S+
Sbjct: 120 ISQGIGEVDVPVNFGGVTFLPEDYLYADNTGVILSQ 155
>gi|262401959|ref|ZP_06078524.1| ribonuclease E inhibitor RraA [Vibrio sp. RC586]
gi|262351931|gb|EEZ01062.1| ribonuclease E inhibitor RraA [Vibrio sp. RC586]
Length = 173
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ A+ N W GIVV G +R+VDE+ IG++A+AS P+ A
Sbjct: 60 ILLIDGGGSLRRALIDAELAALAEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE +P+ GG ++LYAD GI+IS+ LS
Sbjct: 120 TSQGIGEVDIPVNFGGVTFLPEDYLYADNTGIIISQEPLS 159
>gi|294638267|ref|ZP_06716520.1| regulator of ribonuclease activity A [Edwardsiella tarda ATCC
23685]
gi|451966233|ref|ZP_21919487.1| ribonuclease regulator RraA [Edwardsiella tarda NBRC 105688]
gi|291088520|gb|EFE21081.1| regulator of ribonuclease activity A [Edwardsiella tarda ATCC
23685]
gi|451315012|dbj|GAC64849.1| ribonuclease regulator RraA [Edwardsiella tarda NBRC 105688]
Length = 161
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALINAELARLAVQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ GIGE + + GG G+ LYAD GI+++ L +
Sbjct: 120 DSAGIGESDIRVNFGGVTFFSGDHLYADNTGIILAEEPLDL 160
>gi|374334499|ref|YP_005091186.1| ribonuclease activity regulator protein RraA [Oceanimonas sp. GK1]
gi|372984186|gb|AEY00436.1| ribonuclease activity regulator protein RraA [Oceanimonas sp. GK1]
Length = 161
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ ++P+F +G R F G + T+K FE N LI E +++ G GR
Sbjct: 5 TSELCDTYIDMV-----DVVEPMFSTFGGRSSFGGVVTTIKCFESNGLILEAVKQNGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A NGW GIV GC+R+VD + DIG++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAEIAETAAENGWEGIVCYGCVREVDALEDTDIGIQALASIPVSA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE VP+ GG + LYADT GI++S L +
Sbjct: 120 DDSEIGEMEVPVNFGGVTFLPEDHLYADTTGIILSPEALDI 160
>gi|15642667|ref|NP_232300.1| ribonuclease activity regulator protein RraA [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121590922|ref|ZP_01678244.1| protein of unknown function [Vibrio cholerae 2740-80]
gi|121727594|ref|ZP_01680702.1| protein of unknown function [Vibrio cholerae V52]
gi|147674928|ref|YP_001218161.1| ribonuclease activity regulator protein RraA [Vibrio cholerae O395]
gi|153214006|ref|ZP_01949199.1| protein of unknown function [Vibrio cholerae 1587]
gi|153819930|ref|ZP_01972597.1| regulator of ribonuclease activity A [Vibrio cholerae NCTC 8457]
gi|153824105|ref|ZP_01976772.1| regulator of ribonuclease activity A [Vibrio cholerae B33]
gi|153825112|ref|ZP_01977779.1| regulator of ribonuclease activity A [Vibrio cholerae MZO-2]
gi|153829474|ref|ZP_01982141.1| protein of unknown function [Vibrio cholerae 623-39]
gi|183179652|ref|ZP_02957863.1| protein of unknown function [Vibrio cholerae MZO-3]
gi|227082788|ref|YP_002811339.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
M66-2]
gi|227119110|ref|YP_002821006.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae O395]
gi|229507280|ref|ZP_04396785.1| ribonuclease E inhibitor RraA [Vibrio cholerae BX 330286]
gi|229509797|ref|ZP_04399278.1| ribonuclease E inhibitor RraA [Vibrio cholerae B33]
gi|229513592|ref|ZP_04403056.1| ribonuclease E inhibitor RraA [Vibrio cholerae TMA 21]
gi|229516921|ref|ZP_04406367.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC9]
gi|229527403|ref|ZP_04416795.1| ribonuclease E inhibitor RraA [Vibrio cholerae 12129(1)]
gi|229606786|ref|YP_002877434.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
MJ-1236]
gi|254285863|ref|ZP_04960825.1| protein of unknown function [Vibrio cholerae AM-19226]
gi|254851208|ref|ZP_05240558.1| regulator of ribonuclease activity A [Vibrio cholerae MO10]
gi|255744367|ref|ZP_05418319.1| ribonuclease E inhibitor RraA [Vibrio cholera CIRS 101]
gi|262158523|ref|ZP_06029638.1| ribonuclease E inhibitor RraA [Vibrio cholerae INDRE 91/1]
gi|262170083|ref|ZP_06037772.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC27]
gi|262191445|ref|ZP_06049632.1| ribonuclease E inhibitor RraA [Vibrio cholerae CT 5369-93]
gi|297581509|ref|ZP_06943432.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
RC385]
gi|298500510|ref|ZP_07010314.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360036540|ref|YP_004938303.1| regulator of ribonuclease activity A [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742445|ref|YP_005334414.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
IEC224]
gi|384425592|ref|YP_005634950.1| Ribonuclease E inhibitor RraA [Vibrio cholerae LMA3984-4]
gi|417814677|ref|ZP_12461329.1| regulator of ribonuclease activity A [Vibrio cholerae HC-49A2]
gi|417818415|ref|ZP_12465042.1| regulator of ribonuclease activity A [Vibrio cholerae HCUF01]
gi|418335657|ref|ZP_12944565.1| regulator of ribonuclease activity A [Vibrio cholerae HC-06A1]
gi|418339072|ref|ZP_12947965.1| regulator of ribonuclease activity A [Vibrio cholerae HC-23A1]
gi|418347194|ref|ZP_12951946.1| regulator of ribonuclease activity A [Vibrio cholerae HC-28A1]
gi|418350950|ref|ZP_12955680.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43A1]
gi|418356389|ref|ZP_12959107.1| regulator of ribonuclease activity A [Vibrio cholerae HC-61A1]
gi|419827600|ref|ZP_14351098.1| regulator of ribonuclease activity A [Vibrio cholerae CP1033(6)]
gi|421318708|ref|ZP_15769275.1| regulator of ribonuclease activity A [Vibrio cholerae CP1032(5)]
gi|421322407|ref|ZP_15772958.1| regulator of ribonuclease activity A [Vibrio cholerae CP1038(11)]
gi|421326204|ref|ZP_15776727.1| regulator of ribonuclease activity A [Vibrio cholerae CP1041(14)]
gi|421329863|ref|ZP_15780372.1| regulator of ribonuclease activity A [Vibrio cholerae CP1042(15)]
gi|421333821|ref|ZP_15784297.1| regulator of ribonuclease activity A [Vibrio cholerae CP1046(19)]
gi|421337361|ref|ZP_15787821.1| regulator of ribonuclease activity A [Vibrio cholerae CP1048(21)]
gi|421340785|ref|ZP_15791216.1| regulator of ribonuclease activity A [Vibrio cholerae HC-20A2]
gi|421348584|ref|ZP_15798960.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46A1]
gi|421352365|ref|ZP_15802729.1| regulator of ribonuclease activity A [Vibrio cholerae HE-25]
gi|422897752|ref|ZP_16935188.1| regulator of ribonuclease activity A [Vibrio cholerae HC-40A1]
gi|422903955|ref|ZP_16938914.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48A1]
gi|422907833|ref|ZP_16942625.1| regulator of ribonuclease activity A [Vibrio cholerae HC-70A1]
gi|422914673|ref|ZP_16949176.1| regulator of ribonuclease activity A [Vibrio cholerae HFU-02]
gi|422926878|ref|ZP_16959888.1| regulator of ribonuclease activity A [Vibrio cholerae HC-38A1]
gi|423146199|ref|ZP_17133791.1| regulator of ribonuclease activity A [Vibrio cholerae HC-19A1]
gi|423150902|ref|ZP_17138188.1| regulator of ribonuclease activity A [Vibrio cholerae HC-21A1]
gi|423154711|ref|ZP_17141874.1| regulator of ribonuclease activity A [Vibrio cholerae HC-22A1]
gi|423157778|ref|ZP_17144869.1| regulator of ribonuclease activity A [Vibrio cholerae HC-32A1]
gi|423161347|ref|ZP_17148284.1| regulator of ribonuclease activity A [Vibrio cholerae HC-33A2]
gi|423166181|ref|ZP_17152895.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48B2]
gi|423732210|ref|ZP_17705510.1| regulator of ribonuclease activity A [Vibrio cholerae HC-17A1]
gi|423773980|ref|ZP_17713774.1| regulator of ribonuclease activity A [Vibrio cholerae HC-50A2]
gi|423897256|ref|ZP_17727815.1| regulator of ribonuclease activity A [Vibrio cholerae HC-62A1]
gi|423932475|ref|ZP_17732210.1| regulator of ribonuclease activity A [Vibrio cholerae HC-77A1]
gi|424003624|ref|ZP_17746697.1| regulator of ribonuclease activity A [Vibrio cholerae HC-17A2]
gi|424007418|ref|ZP_17750386.1| regulator of ribonuclease activity A [Vibrio cholerae HC-37A1]
gi|424025399|ref|ZP_17765047.1| regulator of ribonuclease activity A [Vibrio cholerae HC-62B1]
gi|424028283|ref|ZP_17767883.1| regulator of ribonuclease activity A [Vibrio cholerae HC-69A1]
gi|424587564|ref|ZP_18027141.1| regulator of ribonuclease activity A [Vibrio cholerae CP1030(3)]
gi|424592361|ref|ZP_18031783.1| regulator of ribonuclease activity A [Vibrio cholerae CP1037(10)]
gi|424596220|ref|ZP_18035537.1| regulator of ribonuclease activity A [Vibrio cholerae CP1040(13)]
gi|424600128|ref|ZP_18039305.1| regulator of ribonuclease activity A [Vibrio Cholerae CP1044(17)]
gi|424602888|ref|ZP_18042026.1| regulator of ribonuclease activity A [Vibrio cholerae CP1047(20)]
gi|424607826|ref|ZP_18046765.1| regulator of ribonuclease activity A [Vibrio cholerae CP1050(23)]
gi|424611639|ref|ZP_18050476.1| regulator of ribonuclease activity A [Vibrio cholerae HC-39A1]
gi|424614469|ref|ZP_18053252.1| regulator of ribonuclease activity A [Vibrio cholerae HC-41A1]
gi|424618437|ref|ZP_18057106.1| regulator of ribonuclease activity A [Vibrio cholerae HC-42A1]
gi|424623222|ref|ZP_18061724.1| regulator of ribonuclease activity A [Vibrio cholerae HC-47A1]
gi|424646183|ref|ZP_18083916.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A2]
gi|424653950|ref|ZP_18091328.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A2]
gi|424657767|ref|ZP_18095050.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A2]
gi|440710885|ref|ZP_20891532.1| ribonuclease E inhibitor RraA [Vibrio cholerae 4260B]
gi|443504998|ref|ZP_21071949.1| regulator of ribonuclease activity A [Vibrio cholerae HC-64A1]
gi|443508905|ref|ZP_21075659.1| regulator of ribonuclease activity A [Vibrio cholerae HC-65A1]
gi|443512743|ref|ZP_21079375.1| regulator of ribonuclease activity A [Vibrio cholerae HC-67A1]
gi|443516302|ref|ZP_21082806.1| regulator of ribonuclease activity A [Vibrio cholerae HC-68A1]
gi|443520095|ref|ZP_21086481.1| regulator of ribonuclease activity A [Vibrio cholerae HC-71A1]
gi|443524988|ref|ZP_21091189.1| regulator of ribonuclease activity A [Vibrio cholerae HC-72A2]
gi|443532567|ref|ZP_21098580.1| regulator of ribonuclease activity A [Vibrio cholerae HC-7A1]
gi|443536383|ref|ZP_21102248.1| regulator of ribonuclease activity A [Vibrio cholerae HC-80A1]
gi|443539915|ref|ZP_21105767.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A1]
gi|449054904|ref|ZP_21733572.1| Ribonuclease E inhibitor RraA [Vibrio cholerae O1 str. Inaba G4222]
gi|17369115|sp|Q9KNQ9.1|RRAA_VIBCH RecName: Full=Regulator of ribonuclease activity A
gi|9657265|gb|AAF95813.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547244|gb|EAX57368.1| protein of unknown function [Vibrio cholerae 2740-80]
gi|121630085|gb|EAX62490.1| protein of unknown function [Vibrio cholerae V52]
gi|124115576|gb|EAY34396.1| protein of unknown function [Vibrio cholerae 1587]
gi|126509528|gb|EAZ72122.1| regulator of ribonuclease activity A [Vibrio cholerae NCTC 8457]
gi|126518375|gb|EAZ75598.1| regulator of ribonuclease activity A [Vibrio cholerae B33]
gi|146316811|gb|ABQ21350.1| protein of unknown function [Vibrio cholerae O395]
gi|148875057|gb|EDL73192.1| protein of unknown function [Vibrio cholerae 623-39]
gi|149741258|gb|EDM55300.1| regulator of ribonuclease activity A [Vibrio cholerae MZO-2]
gi|150424045|gb|EDN15984.1| protein of unknown function [Vibrio cholerae AM-19226]
gi|183013063|gb|EDT88363.1| protein of unknown function [Vibrio cholerae MZO-3]
gi|227010676|gb|ACP06888.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae M66-2]
gi|227014560|gb|ACP10770.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae O395]
gi|229335035|gb|EEO00520.1| ribonuclease E inhibitor RraA [Vibrio cholerae 12129(1)]
gi|229345984|gb|EEO10956.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC9]
gi|229349469|gb|EEO14425.1| ribonuclease E inhibitor RraA [Vibrio cholerae TMA 21]
gi|229353271|gb|EEO18210.1| ribonuclease E inhibitor RraA [Vibrio cholerae B33]
gi|229354785|gb|EEO19706.1| ribonuclease E inhibitor RraA [Vibrio cholerae BX 330286]
gi|229369441|gb|ACQ59864.1| ribonuclease E inhibitor RraA [Vibrio cholerae MJ-1236]
gi|254846913|gb|EET25327.1| regulator of ribonuclease activity A [Vibrio cholerae MO10]
gi|255737892|gb|EET93285.1| ribonuclease E inhibitor RraA [Vibrio cholera CIRS 101]
gi|262021491|gb|EEY40203.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC27]
gi|262029684|gb|EEY48333.1| ribonuclease E inhibitor RraA [Vibrio cholerae INDRE 91/1]
gi|262032685|gb|EEY51236.1| ribonuclease E inhibitor RraA [Vibrio cholerae CT 5369-93]
gi|297534347|gb|EFH73185.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
RC385]
gi|297540679|gb|EFH76736.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327485145|gb|AEA79552.1| Ribonuclease E inhibitor RraA [Vibrio cholerae LMA3984-4]
gi|340035236|gb|EGQ96217.1| regulator of ribonuclease activity A [Vibrio cholerae HCUF01]
gi|340035487|gb|EGQ96467.1| regulator of ribonuclease activity A [Vibrio cholerae HC-49A2]
gi|341619290|gb|EGS45144.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48A1]
gi|341619700|gb|EGS45503.1| regulator of ribonuclease activity A [Vibrio cholerae HC-70A1]
gi|341620160|gb|EGS45938.1| regulator of ribonuclease activity A [Vibrio cholerae HC-40A1]
gi|341635968|gb|EGS60673.1| regulator of ribonuclease activity A [Vibrio cholerae HFU-02]
gi|341645363|gb|EGS69511.1| regulator of ribonuclease activity A [Vibrio cholerae HC-38A1]
gi|356416250|gb|EHH69886.1| regulator of ribonuclease activity A [Vibrio cholerae HC-06A1]
gi|356416836|gb|EHH70460.1| regulator of ribonuclease activity A [Vibrio cholerae HC-21A1]
gi|356421961|gb|EHH75449.1| regulator of ribonuclease activity A [Vibrio cholerae HC-19A1]
gi|356427456|gb|EHH80706.1| regulator of ribonuclease activity A [Vibrio cholerae HC-22A1]
gi|356429115|gb|EHH82334.1| regulator of ribonuclease activity A [Vibrio cholerae HC-28A1]
gi|356429365|gb|EHH82583.1| regulator of ribonuclease activity A [Vibrio cholerae HC-23A1]
gi|356438767|gb|EHH91771.1| regulator of ribonuclease activity A [Vibrio cholerae HC-32A1]
gi|356443425|gb|EHH96247.1| regulator of ribonuclease activity A [Vibrio cholerae HC-33A2]
gi|356443842|gb|EHH96660.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43A1]
gi|356448755|gb|EHI01517.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48B2]
gi|356451603|gb|EHI04286.1| regulator of ribonuclease activity A [Vibrio cholerae HC-61A1]
gi|356647694|gb|AET27749.1| regulator of ribonuclease activity A [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795955|gb|AFC59426.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
IEC224]
gi|395915621|gb|EJH26455.1| regulator of ribonuclease activity A [Vibrio cholerae CP1032(5)]
gi|395915862|gb|EJH26694.1| regulator of ribonuclease activity A [Vibrio cholerae CP1041(14)]
gi|395916956|gb|EJH27785.1| regulator of ribonuclease activity A [Vibrio cholerae CP1038(11)]
gi|395926844|gb|EJH37613.1| regulator of ribonuclease activity A [Vibrio cholerae CP1042(15)]
gi|395927183|gb|EJH37947.1| regulator of ribonuclease activity A [Vibrio cholerae CP1046(19)]
gi|395930389|gb|EJH41137.1| regulator of ribonuclease activity A [Vibrio cholerae CP1048(21)]
gi|395938772|gb|EJH49459.1| regulator of ribonuclease activity A [Vibrio cholerae HC-20A2]
gi|395940948|gb|EJH51628.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46A1]
gi|395949765|gb|EJH60385.1| regulator of ribonuclease activity A [Vibrio cholerae HE-25]
gi|395957526|gb|EJH68068.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A2]
gi|395957974|gb|EJH68486.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A2]
gi|395960535|gb|EJH70903.1| regulator of ribonuclease activity A [Vibrio cholerae HC-42A1]
gi|395969841|gb|EJH79667.1| regulator of ribonuclease activity A [Vibrio cholerae HC-47A1]
gi|395971813|gb|EJH81445.1| regulator of ribonuclease activity A [Vibrio cholerae CP1030(3)]
gi|395974015|gb|EJH83555.1| regulator of ribonuclease activity A [Vibrio cholerae CP1047(20)]
gi|408006076|gb|EKG44256.1| regulator of ribonuclease activity A [Vibrio cholerae HC-39A1]
gi|408010318|gb|EKG48182.1| regulator of ribonuclease activity A [Vibrio cholerae HC-41A1]
gi|408029611|gb|EKG66324.1| regulator of ribonuclease activity A [Vibrio cholerae CP1037(10)]
gi|408030162|gb|EKG66833.1| regulator of ribonuclease activity A [Vibrio cholerae CP1040(13)]
gi|408040417|gb|EKG76603.1| regulator of ribonuclease activity A [Vibrio Cholerae CP1044(17)]
gi|408041411|gb|EKG77518.1| regulator of ribonuclease activity A [Vibrio cholerae CP1050(23)]
gi|408051735|gb|EKG86816.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A2]
gi|408607020|gb|EKK80433.1| regulator of ribonuclease activity A [Vibrio cholerae CP1033(6)]
gi|408621718|gb|EKK94712.1| regulator of ribonuclease activity A [Vibrio cholerae HC-17A1]
gi|408632405|gb|EKL04860.1| regulator of ribonuclease activity A [Vibrio cholerae HC-50A2]
gi|408653304|gb|EKL24477.1| regulator of ribonuclease activity A [Vibrio cholerae HC-77A1]
gi|408653909|gb|EKL25058.1| regulator of ribonuclease activity A [Vibrio cholerae HC-62A1]
gi|408844159|gb|EKL84295.1| regulator of ribonuclease activity A [Vibrio cholerae HC-37A1]
gi|408844728|gb|EKL84852.1| regulator of ribonuclease activity A [Vibrio cholerae HC-17A2]
gi|408869353|gb|EKM08652.1| regulator of ribonuclease activity A [Vibrio cholerae HC-62B1]
gi|408878137|gb|EKM17151.1| regulator of ribonuclease activity A [Vibrio cholerae HC-69A1]
gi|439973618|gb|ELP49831.1| ribonuclease E inhibitor RraA [Vibrio cholerae 4260B]
gi|443430721|gb|ELS73280.1| regulator of ribonuclease activity A [Vibrio cholerae HC-64A1]
gi|443434554|gb|ELS80707.1| regulator of ribonuclease activity A [Vibrio cholerae HC-65A1]
gi|443438385|gb|ELS88106.1| regulator of ribonuclease activity A [Vibrio cholerae HC-67A1]
gi|443442509|gb|ELS95818.1| regulator of ribonuclease activity A [Vibrio cholerae HC-68A1]
gi|443446339|gb|ELT03005.1| regulator of ribonuclease activity A [Vibrio cholerae HC-71A1]
gi|443449020|gb|ELT09323.1| regulator of ribonuclease activity A [Vibrio cholerae HC-72A2]
gi|443456741|gb|ELT24139.1| regulator of ribonuclease activity A [Vibrio cholerae HC-7A1]
gi|443460525|gb|ELT31611.1| regulator of ribonuclease activity A [Vibrio cholerae HC-80A1]
gi|443464599|gb|ELT39261.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A1]
gi|448265522|gb|EMB02756.1| Ribonuclease E inhibitor RraA [Vibrio cholerae O1 str. Inaba G4222]
Length = 171
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ A+ N W GIVV G +R+VDE+ IG++A+AS P+ A
Sbjct: 60 ILLIDGGGSLRRALIDAELAALAEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE +P+ GG ++LYAD GI+IS+ LS
Sbjct: 120 TSQGIGEVDIPVNFGGVTFLPEDYLYADNTGIIISQEPLS 159
>gi|429089002|ref|ZP_19151734.1| Ribonuclease E inhibitor RraA [Cronobacter universalis NCTC 9529]
gi|426508805|emb|CCK16846.1| Ribonuclease E inhibitor RraA [Cronobacter universalis NCTC 9529]
Length = 161
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+VV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGVVVYGAVRQVDDLAELDVGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|229524650|ref|ZP_04414055.1| ribonuclease E inhibitor RraA [Vibrio cholerae bv. albensis VL426]
gi|422923957|ref|ZP_16957093.1| regulator of ribonuclease activity A [Vibrio cholerae BJG-01]
gi|429886050|ref|ZP_19367617.1| Ribonuclease E inhibitor RraA [Vibrio cholerae PS15]
gi|229338231|gb|EEO03248.1| ribonuclease E inhibitor RraA [Vibrio cholerae bv. albensis VL426]
gi|341642980|gb|EGS67278.1| regulator of ribonuclease activity A [Vibrio cholerae BJG-01]
gi|429227196|gb|EKY33251.1| Ribonuclease E inhibitor RraA [Vibrio cholerae PS15]
Length = 171
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ A+ N W GIVV G +R+VDE+ IG++A+AS P+ A
Sbjct: 60 ILLIDGGGSLRRALIDAELAALAEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE +P+ GG ++LYAD GI+IS+ LS
Sbjct: 120 TSQGIGEVDIPVNFGGVTFLPEDYLYADNTGIIISQEPLS 159
>gi|261211238|ref|ZP_05925527.1| ribonuclease E inhibitor RraA [Vibrio sp. RC341]
gi|260839739|gb|EEX66350.1| ribonuclease E inhibitor RraA [Vibrio sp. RC341]
Length = 173
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ A+ N W GIVV G +R+VDE+ IG++A+AS P+ A
Sbjct: 60 ILLIDGGGSLRRALIDAELAALAEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE +P+ GG ++LYAD GI+IS+ LS
Sbjct: 120 TSQGIGEVDIPVNFGGVTFLPEDYLYADNTGIIISQEPLS 159
>gi|138895356|ref|YP_001125809.1| ribonuclease activity regulator protein RraA [Geobacillus
thermodenitrificans NG80-2]
gi|134266869|gb|ABO67064.1| S-adenosylmethionine:2-demethylmenaquinonemethyltransferase,
putative [Geobacillus thermodenitrificans NG80-2]
Length = 161
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 102/162 (62%), Gaps = 5/162 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD Q + EL+ + FQ YG ++ FSGPI T+ VFEDNVL+RE LE
Sbjct: 1 MKTADLCD---QFL--DELQVCELPFQSYGGKRAFSGPIATVDVFEDNVLVREALETVPP 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG GS R A+LG A G AG++++GCIRD EI IGV A+ + P+
Sbjct: 56 GTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHGCIRDSAEIGAMPIGVMAIGTCPV 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ K+G G + V + GG R G ++YAD DG++++ +LS
Sbjct: 116 KSKKEGKGSRDVALEFGGVRWEPGAYVYADADGVVVANKDLS 157
>gi|229521737|ref|ZP_04411155.1| ribonuclease E inhibitor RraA [Vibrio cholerae TM 11079-80]
gi|417821974|ref|ZP_12468587.1| regulator of ribonuclease activity A [Vibrio cholerae HE39]
gi|417825892|ref|ZP_12472478.1| regulator of ribonuclease activity A [Vibrio cholerae HE48]
gi|419831092|ref|ZP_14354575.1| regulator of ribonuclease activity A [Vibrio cholerae HC-1A2]
gi|419834779|ref|ZP_14358232.1| regulator of ribonuclease activity A [Vibrio cholerae HC-61A2]
gi|419838353|ref|ZP_14361789.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46B1]
gi|421344841|ref|ZP_15795243.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43B1]
gi|421356269|ref|ZP_15806599.1| regulator of ribonuclease activity A [Vibrio cholerae HE-45]
gi|422308598|ref|ZP_16395746.1| regulator of ribonuclease activity A [Vibrio cholerae CP1035(8)]
gi|422911485|ref|ZP_16946107.1| regulator of ribonuclease activity A [Vibrio cholerae HE-09]
gi|422918496|ref|ZP_16952807.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02A1]
gi|423736313|ref|ZP_17709501.1| regulator of ribonuclease activity A [Vibrio cholerae HC-41B1]
gi|423823392|ref|ZP_17717398.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55C2]
gi|423857353|ref|ZP_17721200.1| regulator of ribonuclease activity A [Vibrio cholerae HC-59A1]
gi|423885190|ref|ZP_17724792.1| regulator of ribonuclease activity A [Vibrio cholerae HC-60A1]
gi|423960127|ref|ZP_17735692.1| regulator of ribonuclease activity A [Vibrio cholerae HE-40]
gi|423985938|ref|ZP_17739248.1| regulator of ribonuclease activity A [Vibrio cholerae HE-46]
gi|423998914|ref|ZP_17742162.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02C1]
gi|424010647|ref|ZP_17753578.1| regulator of ribonuclease activity A [Vibrio cholerae HC-44C1]
gi|424017817|ref|ZP_17757641.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55B2]
gi|424020904|ref|ZP_17760682.1| regulator of ribonuclease activity A [Vibrio cholerae HC-59B1]
gi|424626117|ref|ZP_18064574.1| regulator of ribonuclease activity A [Vibrio cholerae HC-50A1]
gi|424630598|ref|ZP_18068878.1| regulator of ribonuclease activity A [Vibrio cholerae HC-51A1]
gi|424634646|ref|ZP_18072742.1| regulator of ribonuclease activity A [Vibrio cholerae HC-52A1]
gi|424637725|ref|ZP_18075729.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55A1]
gi|424641628|ref|ZP_18079506.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A1]
gi|424649701|ref|ZP_18087359.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A1]
gi|424661154|ref|ZP_18098400.1| regulator of ribonuclease activity A [Vibrio cholerae HE-16]
gi|443528790|ref|ZP_21094821.1| regulator of ribonuclease activity A [Vibrio cholerae HC-78A1]
gi|229341331|gb|EEO06335.1| ribonuclease E inhibitor RraA [Vibrio cholerae TM 11079-80]
gi|340036010|gb|EGQ96987.1| regulator of ribonuclease activity A [Vibrio cholerae HE39]
gi|340045296|gb|EGR06240.1| regulator of ribonuclease activity A [Vibrio cholerae HE48]
gi|341631455|gb|EGS56349.1| regulator of ribonuclease activity A [Vibrio cholerae HE-09]
gi|341634893|gb|EGS59625.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02A1]
gi|395938924|gb|EJH49610.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43B1]
gi|395949383|gb|EJH60009.1| regulator of ribonuclease activity A [Vibrio cholerae HE-45]
gi|408010679|gb|EKG48530.1| regulator of ribonuclease activity A [Vibrio cholerae HC-50A1]
gi|408016761|gb|EKG54290.1| regulator of ribonuclease activity A [Vibrio cholerae HC-52A1]
gi|408021714|gb|EKG58951.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A1]
gi|408022124|gb|EKG59350.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55A1]
gi|408030816|gb|EKG67460.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A1]
gi|408049730|gb|EKG84921.1| regulator of ribonuclease activity A [Vibrio cholerae HE-16]
gi|408052782|gb|EKG87807.1| regulator of ribonuclease activity A [Vibrio cholerae HC-51A1]
gi|408617142|gb|EKK90266.1| regulator of ribonuclease activity A [Vibrio cholerae CP1035(8)]
gi|408619290|gb|EKK92324.1| regulator of ribonuclease activity A [Vibrio cholerae HC-1A2]
gi|408628746|gb|EKL01472.1| regulator of ribonuclease activity A [Vibrio cholerae HC-41B1]
gi|408634030|gb|EKL06304.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55C2]
gi|408639314|gb|EKL11131.1| regulator of ribonuclease activity A [Vibrio cholerae HC-59A1]
gi|408639579|gb|EKL11388.1| regulator of ribonuclease activity A [Vibrio cholerae HC-60A1]
gi|408648568|gb|EKL19908.1| regulator of ribonuclease activity A [Vibrio cholerae HC-61A2]
gi|408655681|gb|EKL26794.1| regulator of ribonuclease activity A [Vibrio cholerae HE-40]
gi|408663049|gb|EKL33935.1| regulator of ribonuclease activity A [Vibrio cholerae HE-46]
gi|408851885|gb|EKL91738.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02C1]
gi|408855387|gb|EKL95089.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46B1]
gi|408858151|gb|EKL97829.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55B2]
gi|408862720|gb|EKM02222.1| regulator of ribonuclease activity A [Vibrio cholerae HC-44C1]
gi|408865903|gb|EKM05293.1| regulator of ribonuclease activity A [Vibrio cholerae HC-59B1]
gi|443452826|gb|ELT16662.1| regulator of ribonuclease activity A [Vibrio cholerae HC-78A1]
Length = 171
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ A+ N W GIVV G +R+VDE+ IG++A+AS P+ A
Sbjct: 60 ILLIDGGGSLRRALVDAELAALAEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE +P+ GG ++LYAD GI+IS+ LS
Sbjct: 120 TSQGIGEVDIPVNFGGVTFLPEDYLYADNTGIIISQEPLS 159
>gi|156935938|ref|YP_001439854.1| ribonuclease activity regulator protein RraA [Cronobacter sakazakii
ATCC BAA-894]
gi|389842746|ref|YP_006344830.1| ribonuclease activity regulator protein RraA [Cronobacter sakazakii
ES15]
gi|417789947|ref|ZP_12437551.1| ribonuclease activity regulator protein RraA [Cronobacter sakazakii
E899]
gi|429106686|ref|ZP_19168555.1| Ribonuclease E inhibitor RraA [Cronobacter malonaticus 681]
gi|429112456|ref|ZP_19174226.1| Ribonuclease E inhibitor RraA [Cronobacter malonaticus 507]
gi|429119849|ref|ZP_19180549.1| Ribonuclease E inhibitor RraA [Cronobacter sakazakii 680]
gi|449310041|ref|YP_007442397.1| ribonuclease activity regulator protein RraA [Cronobacter sakazakii
SP291]
gi|166230383|sp|A7ML69.1|RRAA_ENTS8 RecName: Full=Regulator of ribonuclease activity A
gi|156534192|gb|ABU79018.1| hypothetical protein ESA_03832 [Cronobacter sakazakii ATCC BAA-894]
gi|333955976|gb|EGL73675.1| ribonuclease activity regulator protein RraA [Cronobacter sakazakii
E899]
gi|387853222|gb|AFK01320.1| ribonuclease activity regulator protein RraA [Cronobacter sakazakii
ES15]
gi|426293409|emb|CCJ94668.1| Ribonuclease E inhibitor RraA [Cronobacter malonaticus 681]
gi|426313613|emb|CCK00339.1| Ribonuclease E inhibitor RraA [Cronobacter malonaticus 507]
gi|426325659|emb|CCK11286.1| Ribonuclease E inhibitor RraA [Cronobacter sakazakii 680]
gi|449100074|gb|AGE88108.1| ribonuclease activity regulator protein RraA [Cronobacter sakazakii
SP291]
Length = 161
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+VV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGLVVYGAVRQVDDLAELDVGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|429082555|ref|ZP_19145621.1| Ribonuclease E inhibitor RraA [Cronobacter condimenti 1330]
gi|426548707|emb|CCJ71662.1| Ribonuclease E inhibitor RraA [Cronobacter condimenti 1330]
Length = 161
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGIVVYGAVRQVDDLAELDVGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|429117709|ref|ZP_19178627.1| Ribonuclease E inhibitor RraA [Cronobacter sakazakii 701]
gi|426320838|emb|CCK04740.1| Ribonuclease E inhibitor RraA [Cronobacter sakazakii 701]
Length = 169
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 13 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEENGRGR 67
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+VV G +R VD++ D+G++ALA+ P+ A
Sbjct: 68 VLLVDGGGSVRRALIDAELARLAVQNEWEGLVVYGAVRQVDDLAELDVGIQALAAIPVGA 127
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 128 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 168
>gi|384107047|ref|ZP_10007949.1| ribonuclease activity regulator protein RraA [Rhodococcus
imtechensis RKJ300]
gi|397733760|ref|ZP_10500474.1| regulator of ribonuclease activity A [Rhodococcus sp. JVH1]
gi|383832982|gb|EID72451.1| ribonuclease activity regulator protein RraA [Rhodococcus
imtechensis RKJ300]
gi|396930558|gb|EJI97753.1| regulator of ribonuclease activity A [Rhodococcus sp. JVH1]
Length = 152
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 96/139 (69%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F +G R+VFSGPI T+K F+DN+L+++ L E GNG VLVVDG S+ A++
Sbjct: 13 DIRSCDTQFIQFGGREVFSGPITTIKCFQDNLLVKQTLGEPGNGGVLVVDGDASIHTALV 72
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + +NGWAG++VNG +RD + DIGV+AL ++P K+ + G GEK+VPI IG
Sbjct: 73 GDIIAGRGVDNGWAGVIVNGAVRDSAILKTLDIGVKALGTNPRKSTQTGSGEKNVPIEIG 132
Query: 141 GTRISDGEWLYADTDGILI 159
G + GE +Y+D DG+++
Sbjct: 133 GVTFNPGETVYSDQDGVVV 151
>gi|258625670|ref|ZP_05720549.1| Regulator of ibonuclease activity A protein 2 [Vibrio mimicus
VM603]
gi|258581908|gb|EEW06778.1| Regulator of ibonuclease activity A protein 2 [Vibrio mimicus
VM603]
Length = 172
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ A+ N W GIVV G +R+VDE+ IG++A+AS P+ A
Sbjct: 60 ILLIDGGGSLRRALIDAELAALAEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G+GE +P+ GG ++LYAD GI+IS+ LS
Sbjct: 120 TSQGVGEVDIPVNFGGVTFLPEDYLYADNTGIIISQEPLS 159
>gi|377578607|ref|ZP_09807584.1| regulator of ribonuclease activity A [Escherichia hermannii NBRC
105704]
gi|377540193|dbj|GAB52749.1| regulator of ribonuclease activity A [Escherichia hermannii NBRC
105704]
Length = 161
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LE+ G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A+L A N W GIV+ G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 ILLVDGGGSVRRALLDAELARLAVQNEWEGIVIYGAVRQVDDLEEMDLGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE V + GG G+ LYAD G+++S L +
Sbjct: 120 SGEGIGESDVRVNFGGVTFFSGDHLYADNTGMILSEDPLDI 160
>gi|441506342|ref|ZP_20988315.1| Ribonuclease E inhibitor RraA [Photobacterium sp. AK15]
gi|441425960|gb|ELR63449.1| Ribonuclease E inhibitor RraA [Photobacterium sp. AK15]
Length = 166
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 94/146 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R L YG R +F G +VTL+ FEDN L+R+ + E G G+VLV+DG GS R A+L
Sbjct: 15 DVRWLPLPTHDYGGRTIFYGEVVTLRCFEDNSLVRDIVSEDGTGKVLVIDGHGSCRLALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + A NN W GIV+NG RD+ + DIGV+ALA+ P K K+ G+++V +T+
Sbjct: 75 GDQLAMLAHNNNWEGIVINGAARDIGTLGTIDIGVKALAACPFKTEKRQTGDRNVTLTVA 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
T + G+ LYAD +GIL+S+ L +
Sbjct: 135 HTLVYPGDMLYADRNGILLSKKALDL 160
>gi|323495131|ref|ZP_08100217.1| ribonuclease activity regulator protein RraA [Vibrio brasiliensis
LMG 20546]
gi|323310632|gb|EGA63810.1| ribonuclease activity regulator protein RraA [Vibrio brasiliensis
LMG 20546]
Length = 175
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 101/159 (63%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G + T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGCASFAGQVTTVKCYEDNGLIREILEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++A+AS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAELASLAEENEWEGIVVYGCVREVDELEDMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+G+GE +P+ GG ++LYAD G+++S+ L
Sbjct: 120 TSQGVGEVDIPVNFGGVTFLPEDYLYADNTGVILSQEPL 158
>gi|343496050|ref|ZP_08734157.1| ribonuclease activity regulator protein RraA [Vibrio
nigripulchritudo ATCC 27043]
gi|342821891|gb|EGU56657.1| ribonuclease activity regulator protein RraA [Vibrio
nigripulchritudo ATCC 27043]
Length = 176
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+ +CD I ++ ++P+F +G F+G I T+K FEDN LIR LE+ G G
Sbjct: 4 NTSALCD-----IYQDQVDVVEPMFSNFGGSASFAGQITTIKCFEDNGLIRNTLEQDGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ ++G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDAELASLAEENEWEGIVVYGCVREVDELEDMNLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
A ++ IGE+ + + GG ++LYAD GI+IS+ L
Sbjct: 119 AAQQEIGEQDLAVNFGGVTFLPDDYLYADNTGIIISQEPL 158
>gi|312137586|ref|YP_004004922.1| ribonuclease e inhibitor rraa [Rhodococcus equi 103S]
gi|325677443|ref|ZP_08157107.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Rhodococcus equi ATCC 33707]
gi|311886925|emb|CBH46234.1| ribonuclease E inhibitor RraA [Rhodococcus equi 103S]
gi|325551690|gb|EGD21388.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Rhodococcus equi ATCC 33707]
Length = 156
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 102/156 (65%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++ D + ++R+ F +G R VFSGPI T+K F+DN+L+++ L E GN
Sbjct: 5 VATADLADE-----IGPDIRSCDTQFIQFGARAVFSGPITTIKCFQDNLLVKQTLSEPGN 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG S+ A++G + +NGWAG++VNG +RD + DIG++AL ++P
Sbjct: 60 GGVLVVDGDASVHTALVGDIIAGRGVSNGWAGVIVNGAVRDSAILRTLDIGIKALGTNPR 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ + G GEK+VP++ GG + GE +Y+D DG+++
Sbjct: 120 KSTQTGSGEKNVPVSFGGVTFNPGETVYSDDDGVVV 155
>gi|258620457|ref|ZP_05715495.1| Regulator of ibonuclease activity A protein 2 [Vibrio mimicus
VM573]
gi|262170396|ref|ZP_06038074.1| ribonuclease E inhibitor RraA [Vibrio mimicus MB-451]
gi|424809316|ref|ZP_18234697.1| ribonuclease activity regulator protein RraA [Vibrio mimicus SX-4]
gi|449145026|ref|ZP_21775836.1| Ribonuclease E inhibitor RraA [Vibrio mimicus CAIM 602]
gi|258587336|gb|EEW12047.1| Regulator of ibonuclease activity A protein 2 [Vibrio mimicus
VM573]
gi|261891472|gb|EEY37458.1| ribonuclease E inhibitor RraA [Vibrio mimicus MB-451]
gi|342323250|gb|EGU19035.1| ribonuclease activity regulator protein RraA [Vibrio mimicus SX-4]
gi|449079344|gb|EMB50268.1| Ribonuclease E inhibitor RraA [Vibrio mimicus CAIM 602]
Length = 171
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K +EDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYLDQVDVVEPMFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGSLR A++ A+ N W GIVV G +R+VDE+ IG++A+AS P+ A
Sbjct: 60 ILLIDGGGSLRRALIDAELAALAEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G+GE +P+ GG ++LYAD GI+IS+ LS
Sbjct: 120 TSQGVGEVDIPVNFGGVTFLPEDYLYADNTGIIISQEPLS 159
>gi|317494765|ref|ZP_07953177.1| RraA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365836983|ref|ZP_09378367.1| regulator of ribonuclease activity A [Hafnia alvei ATCC 51873]
gi|316917367|gb|EFV38714.1| RraA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364563180|gb|EHM41000.1| regulator of ribonuclease activity A [Hafnia alvei ATCC 51873]
Length = 161
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYHEDVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+V+DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P A
Sbjct: 60 VMVIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 DGEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDL 160
>gi|290477231|ref|YP_003470148.1| methyltransferase [Xenorhabdus bovienii SS-2004]
gi|289176581|emb|CBJ83390.1| putative methyltransferase protein in menaquinone biosynthesis
[Xenorhabdus bovienii SS-2004]
Length = 167
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 101/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LEE G+GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDVLEENGSGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD + DIG++A+A+ P +
Sbjct: 60 ILLVDGGGSVRKALVDAGLAQLAVSNEWEGIVVYGAVRQVDSLAELDIGIQAMAAIPAGS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
N +GIGE + + GG G++LYAD G+++S L +
Sbjct: 120 NSEGIGESDIRVNFGGVTFFSGDYLYADNTGMILSDVPLEI 160
>gi|157373027|ref|YP_001481016.1| ribonuclease activity regulator protein RraA [Serratia
proteamaculans 568]
gi|166991549|sp|A8GL98.1|RRAA_SERP5 RecName: Full=Regulator of ribonuclease activity A
gi|157324791|gb|ABV43888.1| Ribonuclease E inhibitor RraA [Serratia proteamaculans 568]
Length = 161
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLEEMDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ASESIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|323498140|ref|ZP_08103144.1| ribonuclease activity regulator protein RraA [Vibrio sinaloensis
DSM 21326]
gi|323316851|gb|EGA69858.1| ribonuclease activity regulator protein RraA [Vibrio sinaloensis
DSM 21326]
Length = 174
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 100/159 (62%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G F+G I T+K FEDN LIRE L++ G GR
Sbjct: 5 TSALCD-----IYLEQVDVVEPMFSNFGGSASFAGQITTVKCFEDNGLIREILDQDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A+ N W GIVV GC+R+VDE+ IG++A+AS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDAELAAIAEENEWEGIVVYGCVREVDELEDMSIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ +GE VP+ GG ++LYAD G+++S+ L
Sbjct: 120 TAQNVGEIDVPVNFGGVTFLPEDYLYADNTGVILSQEPL 158
>gi|419967500|ref|ZP_14483388.1| ribonuclease activity regulator protein RraA [Rhodococcus opacus
M213]
gi|414567008|gb|EKT77813.1| ribonuclease activity regulator protein RraA [Rhodococcus opacus
M213]
Length = 152
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 96/139 (69%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F +G R+VFSGPI T+K F+DN+L+++ L E GNG VLVVDG S+ A++
Sbjct: 13 DIRSCDTQFIQFGGREVFSGPITTIKCFQDNLLVKQTLGEPGNGGVLVVDGDASIHIALV 72
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + +NGWAG++VNG +RD + DIGV+AL ++P K+ + G GEK+VPI IG
Sbjct: 73 GDIIAGRGVDNGWAGVIVNGAVRDSAILKTLDIGVKALGTNPRKSTQTGSGEKNVPIEIG 132
Query: 141 GTRISDGEWLYADTDGILI 159
G + GE +Y+D DG+++
Sbjct: 133 GVTFNPGETVYSDQDGVVV 151
>gi|90580886|ref|ZP_01236688.1| ribonuclease activity regulator protein RraA [Photobacterium
angustum S14]
gi|90437957|gb|EAS63146.1| ribonuclease activity regulator protein RraA [Photobacterium
angustum S14]
Length = 161
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD I + ++P+F YG R F G I T+K FEDN +IR+ LE+ G G
Sbjct: 4 NTSELCD-----IYLEHVDVVEPMFSSYGGRSSFGGQITTIKCFEDNGVIRQVLEQSGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ + AQ N W G+++ GC+R VDE++ D+G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDIDLAHLAQENEWEGLIIYGCVRHVDELDELDLGIQALASTPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+++ IGE V + GG + +YAD G+++S L +
Sbjct: 119 ADQRDIGEIDVAVNFGGVTFLPEDHIYADNTGVILSPEPLDI 160
>gi|334121814|ref|ZP_08495861.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Enterobacter hormaechei ATCC 49162]
gi|419959622|ref|ZP_14475674.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. cloacae GS1]
gi|333392729|gb|EGK63827.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Enterobacter hormaechei ATCC 49162]
gi|388605520|gb|EIM34738.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. cloacae GS1]
Length = 161
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ + A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDADLARLAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|163752236|ref|ZP_02159437.1| ribonuclease activity regulator protein RraA [Shewanella benthica
KT99]
gi|161327866|gb|EDP99045.1| ribonuclease activity regulator protein RraA [Shewanella benthica
KT99]
Length = 168
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 11 DANPQLI--VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLV 68
D P L + EL L +Q YG+R +F G +VT+K FEDN ++E L+ +G G+VL
Sbjct: 7 DLLPDLFDYFNNELVLLTTQYQQYGKRTIFWGELVTIKCFEDNSKVKEILKTEGKGKVLF 66
Query: 69 VDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKK 128
VDGG S+ A+LG + A NGW GIV+NGC+RDV + DIG++A+ ++P+K KK
Sbjct: 67 VDGGASINRALLGDLITLSAVENGWEGIVINGCVRDVGALKLMDIGIKAIGTNPIKTQKK 126
Query: 129 GIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
G+GE + I++ I+ G LY+D +GI I+ EL +
Sbjct: 127 GVGEVNCMISMDNIIITPGMMLYSDENGIGIANTELDL 164
>gi|390991397|ref|ZP_10261663.1| RraA family protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|372553890|emb|CCF68638.1| RraA family protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
Length = 151
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 92/141 (65%)
Query: 26 QPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPV 85
+P+F+ +G R F+GP+ T++ FEDN +RE G+GRVLVVDG GSL+ A+LG
Sbjct: 4 EPLFRHFGGRTAFAGPLATVRCFEDNSRVRELAATPGDGRVLVVDGQGSLKHALLGDQIA 63
Query: 86 VQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRIS 145
A NGWAG++++GC+RDV+ + +GV ALA+ P + ++ +G+ VP+ G
Sbjct: 64 ANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRRTERRDLGDVDVPVNFAGVPFV 123
Query: 146 DGEWLYADTDGILISRAELSV 166
G WLYAD +G+L++ L++
Sbjct: 124 PGHWLYADANGVLVAPQPLAL 144
>gi|411008526|ref|ZP_11384855.1| ribonuclease activity regulator protein RraA [Aeromonas aquariorum
AAK1]
Length = 159
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 92/143 (64%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
L+ +P+FQ +G + +F G VTL +EDN L+RE + G GRV+V+DGGGSLR A+LG
Sbjct: 16 LQVAEPLFQNFGGKALFHGQAVTLSCYEDNSLVRELVNRPGQGRVMVIDGGGSLRRALLG 75
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
++A GW GIV+ G +RDV + +GV+ALA P+K K+G+GE ++ G
Sbjct: 76 DQLAIKAAEQGWEGIVIYGAVRDVGTLATLALGVKALAPCPVKTEKRGLGELDAVVSFAG 135
Query: 142 TRISDGEWLYADTDGILISRAEL 164
I G+++YAD +G+L+S L
Sbjct: 136 VTIHPGDYVYADLNGVLVSATRL 158
>gi|119776332|ref|YP_929072.1| ribonuclease activity regulator protein RraA [Shewanella
amazonensis SB2B]
gi|119768832|gb|ABM01403.1| protein of unknown function 1935 [Shewanella amazonensis SB2B]
Length = 161
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI + L E G G
Sbjct: 4 NTSELCDMFLDVV-----DVVEPMFSNYGGVSSFGGAISTVKCFEDNGLIADVLAEDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGSLR A++ NNGW GI+V G +RDVD + DIG++ALAS P+
Sbjct: 59 RVLLVDGGGSLRRALIDAAVAEIGVNNGWEGIIVYGSVRDVDALEELDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GIGE VP GG G+ +YAD+ GI++S L +
Sbjct: 119 ADNNGIGELDVPCNFGGVSFLPGDHIYADSTGIILSPEPLDI 160
>gi|429102704|ref|ZP_19164678.1| Ribonuclease E inhibitor RraA [Cronobacter turicensis 564]
gi|426289353|emb|CCJ90791.1| Ribonuclease E inhibitor RraA [Cronobacter turicensis 564]
Length = 161
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGIVVYGAVRQVDDLAEMDVGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEAIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|260595963|ref|YP_003208534.1| ribonuclease activity regulator protein RraA [Cronobacter
turicensis z3032]
gi|260215140|emb|CBA26933.1| Regulator of ribonuclease activity A [Cronobacter turicensis z3032]
Length = 161
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGIVVYGAVRQVDDLAELDVGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEAIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|424801739|ref|ZP_18227281.1| Ribonuclease E inhibitor RraA [Cronobacter sakazakii 696]
gi|423237460|emb|CCK09151.1| Ribonuclease E inhibitor RraA [Cronobacter sakazakii 696]
Length = 161
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+VV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGLVVYGAVRQVDDLAELDVGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ +YAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHIYADNTGIILSEDPLDI 160
>gi|238921641|ref|YP_002935156.1| regulator of ribonuclease activity A, putative [Edwardsiella
ictaluri 93-146]
gi|259494529|sp|C5BB79.1|RRAA_EDWI9 RecName: Full=Regulator of ribonuclease activity A
gi|238871210|gb|ACR70921.1| regulator of ribonuclease activity A, putative [Edwardsiella
ictaluri 93-146]
Length = 161
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVIDGGGSVRRALVNAELGRLAVQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ GIGE + + GG G+ LYAD GI+++ L +
Sbjct: 120 DSDGIGESDIRVNFGGVTFFSGDHLYADNTGIILAEEPLDI 160
>gi|392548726|ref|ZP_10295863.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
rubra ATCC 29570]
Length = 168
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD + + L+P+F +G + FSG I TLK FE+N LI + L++ G G
Sbjct: 4 STSDLCDH-----FADAVDVLEPMFINFGGQSAFSGRIKTLKCFENNELINQVLQQDGTG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
++L+VDGGGS R A++ A N W GIVV G +R V+E+ CD+G++A+AS P+
Sbjct: 59 QILLVDGGGSTRRALIDIELAELAMENNWQGIVVYGAVRHVEELEECDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ G GE+ +P+ G D ++LYAD GI+IS EL +
Sbjct: 119 ADSHGGGEQGIPVNFAGVSFYDDDYLYADATGIIISAEELQL 160
>gi|152978867|ref|YP_001344496.1| ribonuclease activity A regulator [Actinobacillus succinogenes
130Z]
gi|150840590|gb|ABR74561.1| regulator of ribonuclease activity A [Actinobacillus succinogenes
130Z]
Length = 159
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 6/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M TA++CDA P ++ + F+ YG R+ F G I T+ + DNVL+R + +
Sbjct: 1 MKDFQTADLCDAYP------DVASCTADFKQYGLRKKFYGRIRTVSCYLDNVLLRRLVSQ 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNG VLVVDG G+ CA++G N A +NGWAG+++ G IRD ING + G++AL S
Sbjct: 55 PGNGDVLVVDGKGARDCALMGDNIAKIAMDNGWAGVIIFGMIRDSVAINGMNFGIKALGS 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+P K+ K GIG+ V +T G + ++Y+D DGI++S L
Sbjct: 115 NPKKSAKNGIGDVDVMVTFGNLSFTPSHYVYSDEDGIIVSETAL 158
>gi|351728365|ref|ZP_08946056.1| ribonuclease activity regulator protein RraA [Acidovorax radicis
N35]
Length = 171
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
A +T + CD + + ++G R L P+FQ +G F+GPI T+K EDN ++ +E
Sbjct: 8 APFSTCDFCDVH-KGDMTGAFRVLPPVFQSFGGVAAFAGPISTVKCHEDNTQVKAAVESP 66
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G GRVLVVDGGGSLR A++GGN A NGWAG+VV+GC+RDV E+N +G+RALA
Sbjct: 67 GEGRVLVVDGGGSLRRALVGGNLAAAAALNGWAGVVVDGCVRDVAELNAAAVGIRALALI 126
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
P+ ++G G++ V + I G + G+WLYAD DGI++S L+
Sbjct: 127 PLPTERRGEGQRDVAVQIQGVWVRPGDWLYADADGIVVSARPLA 170
>gi|238764477|ref|ZP_04625425.1| Regulator of ribonuclease activity A protein 2 [Yersinia
kristensenii ATCC 33638]
gi|238697289|gb|EEP90058.1| Regulator of ribonuclease activity A protein 2 [Yersinia
kristensenii ATCC 33638]
Length = 161
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALINAELADLALKNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ADEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDI 160
>gi|123440502|ref|YP_001004496.1| ribonuclease activity regulator protein RraA [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|238750842|ref|ZP_04612340.1| Regulator of ribonuclease activity A protein 2 [Yersinia rohdei
ATCC 43380]
gi|238798296|ref|ZP_04641780.1| Regulator of ribonuclease activity A protein 2 [Yersinia mollaretii
ATCC 43969]
gi|332159728|ref|YP_004296305.1| ribonuclease activity regulator protein RraA [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386310267|ref|YP_006006323.1| ribonuclease E inhibitor RraA [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418242540|ref|ZP_12869049.1| ribonuclease activity regulator protein RraA [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|420260997|ref|ZP_14763657.1| ribonuclease activity regulator protein RraA [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|433551704|ref|ZP_20507745.1| Ribonuclease E inhibitor RraA [Yersinia enterocolitica IP 10393]
gi|166230400|sp|A1JI06.1|RRAA_YERE8 RecName: Full=Regulator of ribonuclease activity A
gi|122087463|emb|CAL10244.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|238710986|gb|EEQ03206.1| Regulator of ribonuclease activity A protein 2 [Yersinia rohdei
ATCC 43380]
gi|238717843|gb|EEQ09675.1| Regulator of ribonuclease activity A protein 2 [Yersinia mollaretii
ATCC 43969]
gi|318603859|emb|CBY25357.1| ribonuclease E inhibitor RraA [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325663958|gb|ADZ40602.1| ribonuclease activity regulator protein RraA [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330858957|emb|CBX69319.1| regulator of ribonuclease activity A [Yersinia enterocolitica
W22703]
gi|351778054|gb|EHB20230.1| ribonuclease activity regulator protein RraA [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|404511501|gb|EKA25376.1| ribonuclease activity regulator protein RraA [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|431787373|emb|CCO70785.1| Ribonuclease E inhibitor RraA [Yersinia enterocolitica IP 10393]
Length = 161
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+++CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSDLCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VDE+ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALINAELADLALKNEWEGIVVYGAVRQVDELAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ADEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDI 160
>gi|440233018|ref|YP_007346811.1| regulator of ribonuclease activity A [Serratia marcescens FGI94]
gi|440054723|gb|AGB84626.1| regulator of ribonuclease activity A [Serratia marcescens FGI94]
Length = 161
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI+++ L +
Sbjct: 120 TSEGVGESDIRVNFGGVTFFSGDHLYADNTGIILAEDPLDI 160
>gi|196249197|ref|ZP_03147896.1| regulator of ribonuclease activity A [Geobacillus sp. G11MC16]
gi|375008882|ref|YP_004982515.1| S-adenosylmethionine:2- demethylmenaquinonemethyltransferase
[Geobacillus thermoleovorans CCB_US3_UF5]
gi|448238066|ref|YP_007402124.1| regulator of ribonuclease activity A [Geobacillus sp. GHH01]
gi|196211426|gb|EDY06186.1| regulator of ribonuclease activity A [Geobacillus sp. G11MC16]
gi|359287731|gb|AEV19415.1| S-adenosylmethionine:2- demethylmenaquinonemethyltransferase
[Geobacillus thermoleovorans CCB_US3_UF5]
gi|445206908|gb|AGE22373.1| regulator of ribonuclease activity A [Geobacillus sp. GHH01]
Length = 161
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 101/161 (62%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD Q + EL+ + FQ YG ++ FSGPI T+ VFEDNVL+RE LE
Sbjct: 1 MKTADLCD---QFL--DELQVCELPFQSYGGKRAFSGPIATVDVFEDNVLVREALETVPP 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG GS R A+LG A G AG++++GCIRD EI IGV A+ + P+
Sbjct: 56 GTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHGCIRDSAEIGAMPIGVMAIGTCPV 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K+G G + V + GG R G ++YAD DG++++ +L
Sbjct: 116 KSKKEGKGSRDVALEFGGVRWEPGAYVYADADGVVVANKDL 156
>gi|423197554|ref|ZP_17184137.1| RraA family protein [Aeromonas hydrophila SSU]
gi|404631242|gb|EKB27878.1| RraA family protein [Aeromonas hydrophila SSU]
Length = 159
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 92/143 (64%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
L+ +P+FQ +G + +F G VTL +EDN L+RE + G GRV+V+DGGGSLR A+LG
Sbjct: 16 LQVAEPLFQNFGGKALFHGQAVTLSCYEDNSLVRELVNRPGQGRVMVIDGGGSLRRALLG 75
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
++A GW GIV+ G +RDV + +GV+ALA P+K K+G+GE ++ G
Sbjct: 76 DQLAIKAAEQGWEGIVIYGAVRDVGTLATLALGVKALAPCPVKTEKRGLGELDSVVSFAG 135
Query: 142 TRISDGEWLYADTDGILISRAEL 164
I G+++YAD +G+L+S L
Sbjct: 136 VTIHPGDYVYADLNGVLVSATRL 158
>gi|322834999|ref|YP_004215026.1| ribonuclease activity A regulator [Rahnella sp. Y9602]
gi|383192183|ref|YP_005202311.1| ribonuclease activity A regulator [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|384260221|ref|YP_005404155.1| ribonuclease activity regulator protein RraA [Rahnella aquatilis
HX2]
gi|321170200|gb|ADW75899.1| regulator of ribonuclease activity A [Rahnella sp. Y9602]
gi|371590441|gb|AEX54171.1| regulator of ribonuclease activity A [Rahnella aquatilis CIP 78.65
= ATCC 33071]
gi|380756197|gb|AFE60588.1| ribonuclease activity regulator protein RraA [Rahnella aquatilis
HX2]
Length = 161
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS+R A+L A N W GIV+ G +R VD++ D+G++A+A+ P A
Sbjct: 60 VLVIDGGGSVRRALLDAGLARLALQNEWEGIVIYGAVRQVDDLEELDLGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 GSEGIGESDIRVNFGGVTFFSGDHLYADNTGIVLSEDPLDI 160
>gi|334703785|ref|ZP_08519651.1| ribonuclease activity regulator protein RraA [Aeromonas caviae
Ae398]
Length = 161
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 93/143 (65%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
LR P+F YG + +F G VTL FEDN L+R+ + G+G+V+V+DGGGSLR A+LG
Sbjct: 18 LRIADPLFHDYGGKALFYGEAVTLSCFEDNSLVRDLVNRPGHGKVMVIDGGGSLRRALLG 77
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
++A GW GI++NG +RDV + +GV+ALA P+K K+G+G ++ G
Sbjct: 78 DQLAIKAVEQGWEGILINGAVRDVGTLATLALGVKALAPCPVKTEKRGLGTLDAVVSFAG 137
Query: 142 TRISDGEWLYADTDGILISRAEL 164
I+ G+++YAD +G+L+S A L
Sbjct: 138 VTIAPGDYVYADLNGVLVSGARL 160
>gi|254515218|ref|ZP_05127279.1| regulator of ribonuclease activity A [gamma proteobacterium NOR5-3]
gi|219677461|gb|EED33826.1| regulator of ribonuclease activity A [gamma proteobacterium NOR5-3]
Length = 162
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 1 MALV-TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLE 59
MA V +T ++ D+ P E A+ +Q YG + FSG VT+K FEDN LI+E ++
Sbjct: 1 MATVFSTPDLADSAP------EAHAILHAWQDYGAVESFSGVAVTVKCFEDNSLIKELVQ 54
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
+ G GRV+VVDGG SLR A+LG +A NGW+G+V+ G +RDV+ + +GV+AL
Sbjct: 55 QPGQGRVIVVDGGCSLRRALLGDQLAAKAVENGWSGLVIAGAVRDVEILETLALGVKALG 114
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ P K +K+G G+ ++ + IGG + G+++YAD +G+L+S L
Sbjct: 115 ACPQKTDKRGEGQLNITVEIGGATVCSGDYIYADRNGVLVSAEAL 159
>gi|295095086|emb|CBK84176.1| regulator of ribonuclease activity A [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 161
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALIDAELAGIAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGDGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|238789595|ref|ZP_04633379.1| Regulator of ribonuclease activity A protein 2 [Yersinia
frederiksenii ATCC 33641]
gi|238722348|gb|EEQ14004.1| Regulator of ribonuclease activity A protein 2 [Yersinia
frederiksenii ATCC 33641]
Length = 161
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+++CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSDLCD-----IYHEEVNVVEPLFSNFGGRTSFGGEITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A + W GIVV G +R VDE+ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALINAELARHALEHEWEGIVVYGAVRQVDELAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ADEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDI 160
>gi|113971878|ref|YP_735671.1| ribonuclease activity regulator protein RraA [Shewanella sp. MR-4]
gi|114045917|ref|YP_736467.1| ribonuclease activity regulator protein RraA [Shewanella sp. MR-7]
gi|117922155|ref|YP_871347.1| ribonuclease activity regulator protein RraA [Shewanella sp. ANA-3]
gi|113886562|gb|ABI40614.1| regulator of ribonuclease activity A [Shewanella sp. MR-4]
gi|113887359|gb|ABI41410.1| regulator of ribonuclease activity A [Shewanella sp. MR-7]
gi|117614487|gb|ABK49941.1| regulator of ribonuclease activity A [Shewanella sp. ANA-3]
Length = 161
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L+E G G
Sbjct: 4 NTSELCDMYLDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLITEVLQEDGQG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A++ + A NN W GI+V G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALIDASIAEIAVNNNWEGIIVYGSVRDVDALEELDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 119 ADGNSVGEVEIPVNFGGVTFLPGDHIYADNTGIILSPEPLDI 160
>gi|239826983|ref|YP_002949607.1| ribonuclease activity regulator protein RraA [Geobacillus sp.
WCH70]
gi|239807276|gb|ACS24341.1| regulator of ribonuclease activity A [Geobacillus sp. WCH70]
Length = 161
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD EL+ Q Q YG + FSGPI T+ VFEDNVL+RE LE
Sbjct: 1 MKTADLCDE-----FLSELQVCQLPMQSYGGKAEFSGPIATVDVFEDNVLVREALETVPA 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG GS CA+LG A G AG++++GCIRD EI +GV A+ + P+
Sbjct: 56 GTVLVVDGKGSRNCALLGDRLAQIACERGLAGVIIHGCIRDSAEIANMPLGVMAIGTCPV 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K+G G++ V + GG R G ++YAD DGI++++ +L
Sbjct: 116 KSKKEGKGKRDVALEFGGVRWEPGAYVYADQDGIVLAKTDL 156
>gi|395234086|ref|ZP_10412317.1| ribonuclease activity regulator protein RraA [Enterobacter sp. Ag1]
gi|394731452|gb|EJF31233.1| ribonuclease activity regulator protein RraA [Enterobacter sp. Ag1]
Length = 161
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P +
Sbjct: 60 VLLVDGGGSVRRALIDAELARLALQNEWEGIVVYGAVRQVDDLEELDIGIQAIAAIPAGS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|88704122|ref|ZP_01101837.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Congregibacter litoralis KT71]
gi|88701949|gb|EAQ99053.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Congregibacter litoralis KT71]
Length = 162
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T ++ D+ P + RAL ++ +G F+G VT+K FEDN L++E +++ G G
Sbjct: 6 STPDLADSAP------DARALIHAWRDFGGVDNFTGVAVTVKCFEDNSLVKELVQQPGEG 59
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RV+VVDGG SLR A+LG +A NGW+G+V+ G +RDV+ + +GV+AL + P K
Sbjct: 60 RVMVVDGGCSLRRALLGDQLAAKAVENGWSGLVIAGAVRDVEILATLALGVKALGACPQK 119
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+G G++ +PI IGGT + G+++YAD +G+L+S L
Sbjct: 120 TDKRGEGQRDLPIDIGGTTVRSGDYVYADRNGVLVSAEAL 159
>gi|401677264|ref|ZP_10809241.1| ribonuclease activity regulator protein RraA [Enterobacter sp.
SST3]
gi|400215455|gb|EJO46364.1| ribonuclease activity regulator protein RraA [Enterobacter sp.
SST3]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G IVT+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIVTVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALIDAELAGIAAQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGDGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|332289010|ref|YP_004419862.1| ribonuclease activity regulator protein RraA [Gallibacterium anatis
UMN179]
gi|330431906|gb|AEC16965.1| ribonuclease activity regulator protein RraA [Gallibacterium anatis
UMN179]
Length = 164
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ + PIF +G FSG I T+K FE N LI E LEE+G
Sbjct: 3 IDTSELCD-----IYLDQVDVVDPIFSSFGGVSAFSGKITTIKCFESNGLIAEVLEEEGQ 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ A +NGW GI+V G +R +D++ DIG++ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALIDAELAQLAADNGWEGIIVYGAVRQIDQLENIDIGIQALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+++ GE VP+ GG +++YAD GI++S +L +
Sbjct: 118 SADEQTSGEVDVPVNFGGVSFLPEDFVYADLTGIILSPEQLDL 160
>gi|261343007|ref|ZP_05970865.1| hypothetical protein ENTCAN_09610 [Enterobacter cancerogenus ATCC
35316]
gi|288314759|gb|EFC53697.1| regulator of ribonuclease activity A [Enterobacter cancerogenus
ATCC 35316]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ + A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDADLARLAAQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 AGDGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|238786107|ref|ZP_04630063.1| Regulator of ribonuclease activity A protein 2 [Yersinia bercovieri
ATCC 43970]
gi|238712984|gb|EEQ05040.1| Regulator of ribonuclease activity A protein 2 [Yersinia bercovieri
ATCC 43970]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+++CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSDLCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VDE+ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVNAELADLALRNEWEGIVVYGAVRQVDELAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ADEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDI 160
>gi|345301472|ref|YP_004830830.1| Regulator of ribonuclease activity A [Enterobacter asburiae LF7a]
gi|345095409|gb|AEN67045.1| Regulator of ribonuclease activity A [Enterobacter asburiae LF7a]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ + A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 ILLVDGGGSVRRALIDADLARLAMQNEWEGIVVYGSVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|330827844|ref|YP_004390796.1| Regulator of ribonuclease activity A [Aeromonas veronii B565]
gi|406674900|ref|ZP_11082092.1| RraA family protein [Aeromonas veronii AMC35]
gi|423203710|ref|ZP_17190278.1| RraA family protein [Aeromonas veronii AER39]
gi|423204852|ref|ZP_17191408.1| RraA family protein [Aeromonas veronii AMC34]
gi|423211484|ref|ZP_17198017.1| RraA family protein [Aeromonas veronii AER397]
gi|328802980|gb|AEB48179.1| Regulator of ribonuclease activity A [Aeromonas veronii B565]
gi|404612488|gb|EKB09549.1| RraA family protein [Aeromonas veronii AER39]
gi|404613564|gb|EKB10585.1| RraA family protein [Aeromonas veronii AER397]
gi|404625728|gb|EKB22543.1| RraA family protein [Aeromonas veronii AMC34]
gi|404628408|gb|EKB25190.1| RraA family protein [Aeromonas veronii AMC35]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ L+P+ +G R F G I T+K FE N LIRE ++E G GR
Sbjct: 5 TSELCDIYQDMV-----DVLEPMLCSFGGRASFGGVITTVKCFESNGLIRELVKENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ + A N W GIV GC+R+VD + DIG++ALA+ P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSDIATTAAENDWEGIVCYGCVREVDILEDLDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K +GE +P+ GG + LYADT G+++S L +
Sbjct: 120 DSKDVGETDLPVNFGGVTFLPDDHLYADTTGVILSPEALDI 160
>gi|120600451|ref|YP_965025.1| ribonuclease activity regulator protein RraA [Shewanella sp.
W3-18-1]
gi|146291615|ref|YP_001182039.1| ribonuclease activity regulator protein RraA [Shewanella
putrefaciens CN-32]
gi|386312219|ref|YP_006008384.1| ribonuclease activity A regulator [Shewanella putrefaciens 200]
gi|120560544|gb|ABM26471.1| protein of unknown function 1935 [Shewanella sp. W3-18-1]
gi|145563305|gb|ABP74240.1| protein of unknown function 1935 [Shewanella putrefaciens CN-32]
gi|319424844|gb|ADV52918.1| regulator of ribonuclease activity A [Shewanella putrefaciens 200]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L+E G G
Sbjct: 4 NTSELCDMYLDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLITEVLQEDGQG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A++ G A +N W GI+V G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALIDGAIAELAVSNNWEGIIVYGSVRDVDALEELDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 119 ADGNSVGEVEIPVNFGGVTFLPGDHIYADNTGIILSPEPLDI 160
>gi|56420348|ref|YP_147666.1| ribonuclease activity regulator protein RraA [Geobacillus
kaustophilus HTA426]
gi|158429407|pdb|2PCN|A Chain A, Crystal Structure Of S-Adenosylmethionine:
2-Dimethylmenaquinone Methyltransferase (Gk_1813) From
Geobacillus Kaustophilus Hta426
gi|56380190|dbj|BAD76098.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Geobacillus kaustophilus HTA426]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD Q + EL+ + FQ YG +++FSGPI T+ VFEDNVL+RE LE
Sbjct: 1 MKTADLCD---QFL--DELQVCELPFQSYGGKRMFSGPIATVDVFEDNVLVREALETVPP 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG GS R A+LG A G AG++++GCIRD EI IGV A+ + P+
Sbjct: 56 GTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHGCIRDSAEIGAMPIGVMAIGTCPV 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K+G G + V + GG R G ++YAD DG++++ +L
Sbjct: 116 KSKKEGKGARDVVLEFGGVRWEPGAYVYADADGVVVANKDL 156
>gi|423207512|ref|ZP_17194068.1| RraA family protein [Aeromonas veronii AMC34]
gi|404620579|gb|EKB17476.1| RraA family protein [Aeromonas veronii AMC34]
Length = 159
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD + G L+ +P+FQ +G + +F G VTL +EDN L+RE + G G+V+
Sbjct: 7 DLCDQH-----DGLLQVAEPVFQDFGGKAIFYGRAVTLSCYEDNSLVRELVARPGQGKVM 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
V+DGGGSLR A+LG ++A GW GI+++G RDV + +GV+ALA+ P+K K
Sbjct: 62 VIDGGGSLRRALLGDQLAIKAVEQGWEGILIHGAARDVGTLATLTLGVKALAACPVKTEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+G+GE ++ G I +G+++YAD +G+++S L
Sbjct: 122 RGLGELGAVVSFAGVTIHEGDYVYADRNGVVVSATPL 158
>gi|424915222|ref|ZP_18338586.1| RraA family protein [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392851398|gb|EJB03919.1| RraA family protein [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 157
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 88/136 (64%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
F G+R F+GPI T+K FEDN L++ L++ G GRV++VDGGGS R A+LG
Sbjct: 21 FLKLGKRTSFAGPISTVKCFEDNALLKSELQKPGEGRVMIVDGGGSSRVALLGDQIATIL 80
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
++NGWAGI++NG +RD EI+G D+GV L+ P K+ K G G+ +PI GG G
Sbjct: 81 RDNGWAGIIINGAVRDSAEIDGMDVGVFCLSVSPKKSVKDGAGKTGIPIQFGGVTFIPGA 140
Query: 149 WLYADTDGILISRAEL 164
++Y D DG+L S +L
Sbjct: 141 FVYVDADGVLTSSRDL 156
>gi|330318774|gb|AEC11047.1| dimethylmenaquinone methyltransferase [Camellia sinensis]
Length = 126
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 87/138 (63%), Gaps = 23/138 (16%)
Query: 40 GPIVTLKVFEDNVLIREFLEEKGNGRVLV--------VDGGGSL---RCAILGGNPVVQA 88
GPIVTLKVFEDN+L+ FL K L+ V G++ R I+ G V
Sbjct: 1 GPIVTLKVFEDNILVLSFLRRKVTAESLLSMVVQVCRVQFWGAILWYRLKIMDGR--VSG 58
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
Q DV+EINGCDIG RAL S P+KANKKGIGEKHVP+TIGGTRI DGE
Sbjct: 59 QR----------LYYDVEEINGCDIGARALNSPPLKANKKGIGEKHVPVTIGGTRICDGE 108
Query: 149 WLYADTDGILISRAELSV 166
WLYADTDGILIS+ EL V
Sbjct: 109 WLYADTDGILISKMELFV 126
>gi|421081834|ref|ZP_15542741.1| Regulator of ribonuclease activity A protein 2 [Pectobacterium
wasabiae CFBP 3304]
gi|385869799|gb|AFI88319.1| Regulator of ribonuclease activity A [Pectobacterium sp. SCC3193]
gi|401703442|gb|EJS93658.1| Regulator of ribonuclease activity A protein 2 [Pectobacterium
wasabiae CFBP 3304]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLIDGGGSVRRALINAEIARLATQNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 GSEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|146313676|ref|YP_001178750.1| ribonuclease activity regulator protein RraA [Enterobacter sp. 638]
gi|166991548|sp|A4WG69.1|RRAA_ENT38 RecName: Full=Regulator of ribonuclease activity A
gi|145320552|gb|ABP62699.1| protein of unknown function 1935 [Enterobacter sp. 638]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ E LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYELLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ + A N W GIVV G +R VD++ D+G++A+A+ P+ A
Sbjct: 60 ILLVDGGGSVRRALIDADLARLALQNEWEGIVVYGAVRQVDDLEELDLGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|293393525|ref|ZP_06637835.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291423860|gb|EFE97079.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 161
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P A
Sbjct: 60 VLLIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI++S L +
Sbjct: 120 PSEGVGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|448244479|ref|YP_007408532.1| ribonuclease activity regulator protein RraA [Serratia marcescens
WW4]
gi|445214843|gb|AGE20513.1| ribonuclease activity regulator protein RraA [Serratia marcescens
WW4]
gi|453065674|gb|EMF06634.1| ribonuclease activity regulator protein RraA [Serratia marcescens
VGH107]
Length = 161
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P A
Sbjct: 60 VLLVDGGGSVRRALINAELARLAAQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI++S L +
Sbjct: 120 VSEGVGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|365972720|ref|YP_004954281.1| ribonuclease activity A regulator [Enterobacter cloacae EcWSU1]
gi|365751633|gb|AEW75860.1| Regulator of ribonuclease activity A [Enterobacter cloacae EcWSU1]
Length = 161
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G IVT+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIVTVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|296392771|ref|YP_003657655.1| ribonuclease activity A regulator [Segniliparus rotundus DSM 44985]
gi|296179918|gb|ADG96824.1| regulator of ribonuclease activity A [Segniliparus rotundus DSM
44985]
Length = 160
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 93/140 (66%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ YG R+ F+GP+ T++ F+DN LI+ L GNG VLVVDG S+ A++
Sbjct: 19 QVRSCDTQFRQYGGRRQFAGPVRTIRAFQDNALIKSTLSTPGNGAVLVVDGSASVHTALV 78
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++NGWAG+V+NG +RDV + G D+GV+AL S+P K+ K G GE VP+ G
Sbjct: 79 GDVIAKLAEDNGWAGLVLNGAVRDVAALAGLDLGVKALGSNPRKSGKTGAGELDVPVEFG 138
Query: 141 GTRISDGEWLYADTDGILIS 160
G G+ L++D DGI+++
Sbjct: 139 GVVFRPGDLLHSDEDGIVLT 158
>gi|145297290|ref|YP_001140131.1| ribonuclease activity regulator protein RraA [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418362043|ref|ZP_12962687.1| ribonuclease activity regulator protein RraA [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|142850062|gb|ABO88383.1| regulator of ribonuclease activity A [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686678|gb|EHI51271.1| ribonuclease activity regulator protein RraA [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 161
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ L+P+ +G R F G I T+K FE N LIRE ++E G GR
Sbjct: 5 TSELCDIYQDMV-----DVLEPMLCSFGGRASFGGVITTVKCFESNGLIRELVKENGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ + A N W GIV GC+R+VD + DIG++ALA+ P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSDIATTAAENEWEGIVCYGCVREVDILEDLDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K +GE +P+ GG + LYADT G+++S L +
Sbjct: 120 DSKDVGETDLPVNFGGVTFLPDDHLYADTTGVILSPEALDI 160
>gi|373949353|ref|ZP_09609314.1| Regulator of ribonuclease activity A [Shewanella baltica OS183]
gi|386324809|ref|YP_006020926.1| Regulator of ribonuclease activity A [Shewanella baltica BA175]
gi|333818954|gb|AEG11620.1| Regulator of ribonuclease activity A [Shewanella baltica BA175]
gi|373885953|gb|EHQ14845.1| Regulator of ribonuclease activity A [Shewanella baltica OS183]
Length = 164
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 94/140 (67%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L+ L F+ YG +++F G IVT+K FEDN ++E L + G G+VLVVDGGGSLR A+L
Sbjct: 15 KLQLLPLEFKPYGGKRLFWGEIVTVKCFEDNSKVKEILAQDGQGKVLVVDGGGSLRRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW GIV+NGC+RDV +N +GV AL + P+K K G G+ +V + +G
Sbjct: 75 GDLIAQSALDNGWQGIVINGCVRDVARLNTFSLGVYALGAMPIKTEKLGQGQINVAVDMG 134
Query: 141 GTRISDGEWLYADTDGILIS 160
G ++ G LYAD +GI +S
Sbjct: 135 GVMVTPGMMLYADENGIAVS 154
>gi|226326800|ref|ZP_03802318.1| hypothetical protein PROPEN_00660 [Proteus penneri ATCC 35198]
gi|225204637|gb|EEG86991.1| regulator of ribonuclease activity A [Proteus penneri ATCC 35198]
Length = 167
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G + F+G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQEDINVVEPLFSNFGGQSAFNGQIITVKCFEDNGLLYDLLEENGKGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD ++ D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALVDAELAQLAVSNEWEGIVVYGAVRQVDALSELDLGIQAMAAIPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G++LYAD GI++S L +
Sbjct: 120 QSEGIGESDIRVNFGGVTFFSGDYLYADNTGIILSEEPLGL 160
>gi|117620697|ref|YP_857528.1| ribonuclease activity regulator protein RraA [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562104|gb|ABK39052.1| regulator of ribonuclease activity A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 159
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 91/143 (63%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
L+ +P+FQ +G + +F G VTL +EDN L+RE + G GRV+V+DGGGSLR A+LG
Sbjct: 16 LQVAEPLFQNFGGKALFHGQAVTLSCYEDNSLVRELVNRPGQGRVMVIDGGGSLRRALLG 75
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
++A GW GIV+ G +RDV + +GV+ALA P+K K+G GE ++ G
Sbjct: 76 DQLAIKAAEQGWEGIVIYGAVRDVGTLATLALGVKALAPCPVKTEKRGQGELDAVVSFAG 135
Query: 142 TRISDGEWLYADTDGILISRAEL 164
I G+++YAD +G+L+S L
Sbjct: 136 VTIHPGDYVYADLNGVLVSATRL 158
>gi|126176083|ref|YP_001052232.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS155]
gi|152998972|ref|YP_001364653.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS185]
gi|160873558|ref|YP_001552874.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS195]
gi|217971653|ref|YP_002356404.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS223]
gi|373951182|ref|ZP_09611143.1| Regulator of ribonuclease activity A [Shewanella baltica OS183]
gi|378706799|ref|YP_005271693.1| ribonuclease activity A regulator [Shewanella baltica OS678]
gi|386322999|ref|YP_006019116.1| Regulator of ribonuclease activity A [Shewanella baltica BA175]
gi|386342838|ref|YP_006039204.1| Regulator of ribonuclease activity A [Shewanella baltica OS117]
gi|418025766|ref|ZP_12664743.1| Regulator of ribonuclease activity A [Shewanella baltica OS625]
gi|125999288|gb|ABN63363.1| protein of unknown function 1935 [Shewanella baltica OS155]
gi|151363590|gb|ABS06590.1| Ribonuclease E inhibitor RraA [Shewanella baltica OS185]
gi|160859080|gb|ABX47614.1| regulator of ribonuclease activity A [Shewanella baltica OS195]
gi|217496788|gb|ACK44981.1| regulator of ribonuclease activity A [Shewanella baltica OS223]
gi|315265788|gb|ADT92641.1| regulator of ribonuclease activity A [Shewanella baltica OS678]
gi|333817144|gb|AEG09810.1| Regulator of ribonuclease activity A [Shewanella baltica BA175]
gi|334865239|gb|AEH15710.1| Regulator of ribonuclease activity A [Shewanella baltica OS117]
gi|353535027|gb|EHC04592.1| Regulator of ribonuclease activity A [Shewanella baltica OS625]
gi|373887782|gb|EHQ16674.1| Regulator of ribonuclease activity A [Shewanella baltica OS183]
Length = 161
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L+E G G
Sbjct: 4 NTSELCDMYLDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLITEVLQEDGQG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A++ G A +N W GI+V G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALIDGAIAELAVSNNWEGIIVYGSVRDVDALEELDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG G+ +YAD G+++S L +
Sbjct: 119 ADGNSVGEVEIPVNFGGVTFLPGDHIYADNTGVILSPEPLDI 160
>gi|432491765|ref|ZP_19733621.1| RraA family protein [Escherichia coli KTE213]
gi|432716561|ref|ZP_19951573.1| RraA family protein [Escherichia coli KTE9]
gi|432841791|ref|ZP_20075244.1| RraA family protein [Escherichia coli KTE140]
gi|433205689|ref|ZP_20389427.1| RraA family protein [Escherichia coli KTE95]
gi|431016591|gb|ELD30114.1| RraA family protein [Escherichia coli KTE213]
gi|431269683|gb|ELF60989.1| RraA family protein [Escherichia coli KTE9]
gi|431384843|gb|ELG68845.1| RraA family protein [Escherichia coli KTE140]
gi|431715207|gb|ELJ79375.1| RraA family protein [Escherichia coli KTE95]
Length = 161
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 SGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|340001502|ref|YP_004732386.1| menaquinone biosynthesis protein [Salmonella bongori NCTC 12419]
gi|339514864|emb|CCC32635.1| menaquinone biosynthesis protein [Salmonella bongori NCTC 12419]
Length = 161
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+VV G +R VDE+ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAELARLAAQNEWEGLVVYGAVRQVDELEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|311281627|ref|YP_003943858.1| ribonuclease activity A regulator [Enterobacter cloacae SCF1]
gi|308750822|gb|ADO50574.1| regulator of ribonuclease activity A [Enterobacter cloacae SCF1]
Length = 161
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDMLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ + A N W GIVV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 ILLVDGGGSVRRALIDADLARLAVQNEWEGIVVYGAVRQVDDLEELDLGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|336313041|ref|ZP_08567985.1| ribonuclease E inhibitor RraA [Shewanella sp. HN-41]
gi|335863426|gb|EGM68578.1| ribonuclease E inhibitor RraA [Shewanella sp. HN-41]
Length = 161
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L+E G G
Sbjct: 4 NTSELCDMYLDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLITEVLQEDGQG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A++ G A +N W GI++ G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALIDGAIAELAVSNNWEGIIIYGSVRDVDALEELDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 119 ADGNSVGEVEIPVNFGGVTFLPGDHIYADNTGIILSPEPLDI 160
>gi|401765774|ref|YP_006580781.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. cloacae ENHKU01]
gi|400177308|gb|AFP72157.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. cloacae ENHKU01]
Length = 161
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G IVT+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIVTVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALIDAELAGIAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGDGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|238794367|ref|ZP_04637978.1| Regulator of ribonuclease activity A protein 2 [Yersinia intermedia
ATCC 29909]
gi|238726268|gb|EEQ17811.1| Regulator of ribonuclease activity A protein 2 [Yersinia intermedia
ATCC 29909]
Length = 161
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDQLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALIDAELAELALKNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ADEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDI 160
>gi|227113222|ref|ZP_03826878.1| ribonuclease activity regulator protein RraA [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|253686570|ref|YP_003015760.1| regulator of ribonuclease activity A [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|403060487|ref|YP_006648704.1| ribonuclease activity regulator protein RraA [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|259494530|sp|C6DHM4.1|RRAA_PECCP RecName: Full=Regulator of ribonuclease activity A
gi|251753148|gb|ACT11224.1| regulator of ribonuclease activity A [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|402807813|gb|AFR05451.1| ribonuclease activity regulator protein RraA [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 161
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALINAEIARLATQNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI+++ L +
Sbjct: 120 GSEGIGESDIRVNFGGVTFFSGDHLYADNTGIILAEDPLDI 160
>gi|333929714|ref|YP_004503293.1| ribonuclease activity A regulator [Serratia sp. AS12]
gi|333934667|ref|YP_004508245.1| ribonuclease activity A regulator [Serratia plymuthica AS9]
gi|386331537|ref|YP_006027707.1| Regulator of ribonuclease activity A [Serratia sp. AS13]
gi|333476274|gb|AEF47984.1| Regulator of ribonuclease activity A [Serratia plymuthica AS9]
gi|333493774|gb|AEF52936.1| Regulator of ribonuclease activity A [Serratia sp. AS12]
gi|333963870|gb|AEG30643.1| Regulator of ribonuclease activity A [Serratia sp. AS13]
Length = 161
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P A
Sbjct: 60 VLLIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI++S L +
Sbjct: 120 ISEGVGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|297563284|ref|YP_003682258.1| regulator of ribonuclease activity A [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296847732|gb|ADH69752.1| regulator of ribonuclease activity A [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 162
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++ D + LR+ F+ +G R VFSG I T++ EDN L+++ L G+G
Sbjct: 6 TTADLIDDHGD-----TLRSCSTQFRQFGGRAVFSGRIRTVRCHEDNGLVKQVLNTPGDG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLVVDGGGSLR A++G A NGWAG V+ G +RD + G D+GV+AL S+P K
Sbjct: 61 AVLVVDGGGSLRSALMGDMIAEAAVANGWAGTVIFGAVRDTRALGGLDLGVKALGSNPRK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K G VP+T G GEWLY+D DG++++ E+ +
Sbjct: 121 SLKDAAGRLDVPVTFGDVTFVPGEWLYSDEDGVVVNAEEIGL 162
>gi|334706295|ref|ZP_08522161.1| ribonuclease activity regulator protein RraA [Aeromonas caviae
Ae398]
Length = 161
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ L+P+ +G R F G I T+K FE N LIRE ++E G GR
Sbjct: 5 TSELCDIYQDMV-----DVLEPMLCSFGGRASFGGVITTVKCFESNGLIRELVKENGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIV GC+R+VD + DIG++ALA+ P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSEIATTAAENEWEGIVCYGCVREVDILEDLDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K IGE +P+ GG + LYADT G+++S L +
Sbjct: 120 DSKDIGETDLPVNFGGVTFLPDDHLYADTTGVILSPDALDI 160
>gi|345429487|ref|YP_004822605.1| ribonuclease E (RNase E) inhibitor protein [Haemophilus
parainfluenzae T3T1]
gi|301155548|emb|CBW15016.1| ribonuclease E (RNase E) inhibitor protein [Haemophilus
parainfluenzae T3T1]
Length = 166
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I + ++ ++PIF +G F G + T+K FE+N LI E LEE GN
Sbjct: 3 IDTSELCD-----IYADQVDVVEPIFSSFGGVSNFYGKVTTVKCFENNGLIAEILEENGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGG++R A++ A +N WAGI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLVVDGGGAVRRALIDAELAQLAADNDWAGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADENNYGESDLPVNFGGVTFFPEDYIYADLTGIILSQEALDL 160
>gi|419802353|ref|ZP_14327541.1| regulator of ribonuclease activity A [Haemophilus parainfluenzae
HK262]
gi|385190574|gb|EIF38018.1| regulator of ribonuclease activity A [Haemophilus parainfluenzae
HK262]
Length = 166
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I + ++ ++PIF +G F G + T+K FE+N LI E LEE GN
Sbjct: 3 IDTSELCD-----IYADQVDVVEPIFSSFGGVSNFYGKVTTVKCFENNGLIAEILEENGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGG++R A++ A +N WAGI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLVVDGGGAVRRALIDAELAQLAADNDWAGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADENNQGESDIPVNFGGVTFFPEDYIYADLTGIILSQEALDL 160
>gi|400288206|ref|ZP_10790238.1| ribonuclease activity regulator protein RraA [Psychrobacter sp.
PAMC 21119]
Length = 181
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Query: 6 TAEVCDANPQLIVSGELRALQ-PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL-----E 59
T ++ DANP+ V L +++ F +G + F G IVT+K FEDN ++ L +
Sbjct: 18 TCDLLDANPESQVC--LPSIEGKSFHRFGGKDRFCGEIVTVKCFEDNSRVKSLLNSDGKD 75
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
+ GNG+VLVVDGGGS+RCA+LG A +NGWAG++V GC+RDVD++ DIGV AL
Sbjct: 76 KDGNGKVLVVDGGGSMRCALLGDMIAQSAIDNGWAGVMVYGCVRDVDDMAAMDIGVMALG 135
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N++ G+ + I+ G ++ G ++YAD +GI+ S L
Sbjct: 136 CIPRKSNRRDEGQTDIEISFGDLTLNSGMFVYADNNGIIASDKPL 180
>gi|188025490|ref|ZP_02958842.2| hypothetical protein PROSTU_00604 [Providencia stuartii ATCC 25827]
gi|188023374|gb|EDU61414.1| regulator of ribonuclease activity A [Providencia stuartii ATCC
25827]
Length = 197
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I+T+K FEDN L+ + LEE G+GR
Sbjct: 29 TSELCD-----IYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEEDGHGR 83
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD + D+G++A+A+ P
Sbjct: 84 ILLVDGGGSVRKALIDAELARLAVDNHWEGIVVYGAVRQVDALMELDLGIQAIAAIPAGC 143
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G++LYAD GI++S LS
Sbjct: 144 PDEGIGESDIRVNFGGVTFFSGDYLYADNTGIILSEEPLST 184
>gi|417265118|ref|ZP_12052497.1| regulator of ribonuclease activity A [Escherichia coli 2.3916]
gi|418305561|ref|ZP_12917355.1| regulator of ribonuclease activity A [Escherichia coli UMNF18]
gi|339417659|gb|AEJ59331.1| regulator of ribonuclease activity A [Escherichia coli UMNF18]
gi|386221300|gb|EII43744.1| regulator of ribonuclease activity A [Escherichia coli 2.3916]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V I GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRINFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|24375682|ref|NP_719725.1| ribonuclease E inhibitor RraA [Shewanella oneidensis MR-1]
gi|37088830|sp|Q8E9R9.1|RRAA_SHEON RecName: Full=Regulator of ribonuclease activity A
gi|24350604|gb|AAN57169.1| ribonuclease E inhibitor RraA [Shewanella oneidensis MR-1]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ ++P+F YG F G I T+K FEDN LI + L+E G G+
Sbjct: 5 TSELCDMYLDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLITDVLQEDGQGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ G A +N W GI+V G +RDVD + DIG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALIDGTIAELAVSNNWEGIIVYGSVRDVDALEELDIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 120 DGNSVGEVDIPVNFGGVTFLPGDHIYADNTGIILSPEPLDI 160
>gi|50123184|ref|YP_052351.1| ribonuclease activity regulator protein RraA [Pectobacterium
atrosepticum SCRI1043]
gi|61215906|sp|Q6CZ89.1|RRAA_ERWCT RecName: Full=Regulator of ribonuclease activity A
gi|49613710|emb|CAG77161.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Pectobacterium atrosepticum SCRI1043]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + EE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLFEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 GSEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|284008943|emb|CBA75811.1| regulator of ribonuclease activity [Arsenophonus nasoniae]
Length = 172
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R FSG IVT+K FEDN LI + LEE G GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPLFSNFGGRTSFSGQIVTVKCFEDNGLIYDLLEEPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A W GIV+ G +R VDE+ DIG++A+A+ P+
Sbjct: 60 ILLVDGGGSVRKALIDAEFAKFAMKKQWEGIVIYGAVRQVDELAELDIGIQAIAAIPVGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
G GE V + GG ++LYAD GI++S L
Sbjct: 120 TSDGTGESDVRVNFGGVTFFTEDYLYADNTGIILSEHPL 158
>gi|188532278|ref|YP_001906075.1| ribonuclease activity regulator protein RraA [Erwinia tasmaniensis
Et1/99]
gi|226703225|sp|B2VES2.1|RRAA_ERWT9 RecName: Full=Regulator of ribonuclease activity A
gi|188027320|emb|CAO95163.1| Regulator of ribonuclease activity A [Erwinia tasmaniensis Et1/99]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLFDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 ILLVDGGGSMRRALVDAALARLALQNEWEGIVVYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD G+++S L +
Sbjct: 120 AGEGIGESDIRVNFGGVTFFSGDHLYADNTGMILSEDPLDI 160
>gi|378581651|ref|ZP_09830296.1| ribonuclease E (RNase E) inhibitor protein [Pantoea stewartii
subsp. stewartii DC283]
gi|377815821|gb|EHT98931.1| ribonuclease E (RNase E) inhibitor protein [Pantoea stewartii
subsp. stewartii DC283]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VDE+ +IG++A+A+ P+ A
Sbjct: 60 VLLIDGGGSVRRALVDAQLARLAAQNEWEGIVVYGSVRQVDELEELEIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD G+++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGMILSEDPLDI 160
>gi|347735673|ref|ZP_08868500.1| regulator of ribonuclease activity A [Azospirillum amazonense Y2]
gi|346921057|gb|EGY01910.1| regulator of ribonuclease activity A [Azospirillum amazonense Y2]
Length = 158
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ DA + S E++ F+ +G R F GPI T++ EDN L++ L E G G
Sbjct: 5 TADLVDAYEDSLQSCEIQ-----FRSFGARASFHGPIRTVRCHEDNALLKHTLSEAGEGA 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GSLR A++G A +GWAG+V+ G +RD + D+G++AL ++P K+
Sbjct: 60 VLVVDGHGSLRTALVGDVIAGLAFKHGWAGLVLWGAVRDSVALAHIDLGIKALGTNPKKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K G G+ VP++ GG + + G WLYAD DGI++S L
Sbjct: 120 TKTGAGQVDVPLSFGGAQFTPGAWLYADEDGIVVSAVRL 158
>gi|300714741|ref|YP_003739544.1| ribonuclease activity A regulator [Erwinia billingiae Eb661]
gi|299060577|emb|CAX57684.1| Regulator of ribonuclease activity A [Erwinia billingiae Eb661]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEDVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAALARLALQNEWEGIVVYGSVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|157147273|ref|YP_001454593.1| ribonuclease activity regulator protein RraA [Citrobacter koseri
ATCC BAA-895]
gi|166230382|sp|A8AKZ4.1|RRAA_CITK8 RecName: Full=Regulator of ribonuclease activity A
gi|157084478|gb|ABV14156.1| hypothetical protein CKO_03065 [Citrobacter koseri ATCC BAA-895]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++ALA+ P+ A
Sbjct: 60 ILLVDGGGSVRRALVDAELARLATQNEWEGLVIYGAVRQVDDLEELDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|354725791|ref|ZP_09040006.1| ribonuclease activity regulator protein RraA [Enterobacter mori LMG
25706]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALIDAELAGIAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGDGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|417437954|ref|ZP_12161817.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353612864|gb|EHC65122.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAELARLATQNEWEGLVIYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD+ GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADSTGIILSEDPLDI 160
>gi|392981302|ref|YP_006479890.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. dissolvens SDM]
gi|392327235|gb|AFM62188.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. dissolvens SDM]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|261819533|ref|YP_003257639.1| ribonuclease activity regulator protein RraA [Pectobacterium
wasabiae WPP163]
gi|261603546|gb|ACX86032.1| regulator of ribonuclease activity A [Pectobacterium wasabiae
WPP163]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R +++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLIDGGGSVRRSLINAEIARLATQNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 GSEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|312111136|ref|YP_003989452.1| regulator of ribonuclease activity A [Geobacillus sp. Y4.1MC1]
gi|336235584|ref|YP_004588200.1| ribonuclease activity A regulator [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216237|gb|ADP74841.1| regulator of ribonuclease activity A [Geobacillus sp. Y4.1MC1]
gi|335362439|gb|AEH48119.1| regulator of ribonuclease activity A [Geobacillus
thermoglucosidasius C56-YS93]
Length = 160
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 5/162 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+V TA++CD EL+ Q Q YG + FSGPI T+ V EDNVL+RE LE
Sbjct: 1 MVKTADLCDE-----FLSELQVCQLPMQSYGGKAEFSGPIATVDVLEDNVLVREALETVP 55
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G VLVVDG GS CA+LG A + G AG++V+GCIRD EI IGV A+ + P
Sbjct: 56 AGTVLVVDGKGSRNCALLGDRLAQIACDRGLAGVIVHGCIRDSAEIANMPIGVMAIGTCP 115
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+ K+G G++ V + GG G ++YAD DGI++++ +L
Sbjct: 116 VKSKKEGKGKRDVALEFGGVLWEPGAYVYADRDGIVLAKTDL 157
>gi|89075182|ref|ZP_01161613.1| ribonuclease activity regulator protein RraA [Photobacterium sp.
SKA34]
gi|89049004|gb|EAR54571.1| ribonuclease activity regulator protein RraA [Photobacterium sp.
SKA34]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD I + ++P+F YG R F G I T+K FED +IR+ LE+ G G
Sbjct: 4 NTSELCD-----IYLEHVDVVEPMFSSYGGRSSFGGQITTIKCFEDKGVIRQVLEQSGIG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL++DGGGSLR A++ + AQ N W G+++ GC+R VDE++ D+G++ALAS P+
Sbjct: 59 RVLLIDGGGSLRRALIDIDLAHLAQENEWEGLIIYGCVRHVDELDELDLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+++ IGE V + GG + +YAD G+++S L +
Sbjct: 119 ADQRDIGEIDVAVNFGGVTFLPEDHIYADNTGVILSPEPLDI 160
>gi|161505412|ref|YP_001572524.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:- str. RSK2980]
gi|189044041|sp|A9MI36.1|RRAA_SALAR RecName: Full=Regulator of ribonuclease activity A
gi|160866759|gb|ABX23382.1| hypothetical protein SARI_03567 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAELASLATQNEWEGLVIYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|423111190|ref|ZP_17098885.1| RraA family protein [Klebsiella oxytoca 10-5243]
gi|423117202|ref|ZP_17104893.1| RraA family protein [Klebsiella oxytoca 10-5245]
gi|376376503|gb|EHS89281.1| RraA family protein [Klebsiella oxytoca 10-5245]
gi|376377207|gb|EHS89979.1| RraA family protein [Klebsiella oxytoca 10-5243]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G G
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDMLEQNGRGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ + A N W G+VV G +R VD++ DIG++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDADLARLAVQNEWEGLVVYGAVRQVDDLEDLDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|432795192|ref|ZP_20029262.1| RraA family protein [Escherichia coli KTE78]
gi|432796703|ref|ZP_20030735.1| RraA family protein [Escherichia coli KTE79]
gi|431335149|gb|ELG22291.1| RraA family protein [Escherichia coli KTE78]
gi|431347661|gb|ELG34544.1| RraA family protein [Escherichia coli KTE79]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVNAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|387873587|ref|YP_006303891.1| ribonuclease activity regulator protein RraA [Mycobacterium sp.
MOTT36Y]
gi|443308507|ref|ZP_21038293.1| ribonuclease activity regulator protein RraA [Mycobacterium sp.
H4Y]
gi|386787045|gb|AFJ33164.1| ribonuclease activity regulator protein RraA [Mycobacterium sp.
MOTT36Y]
gi|442763623|gb|ELR81622.1| ribonuclease activity regulator protein RraA [Mycobacterium sp.
H4Y]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 99/154 (64%), Gaps = 5/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D+ + ++R+ F+ G R F+GPI T++ FEDN L++ L E G+G
Sbjct: 8 TADLVDS-----IGPDVRSCDTQFRQLGGRAEFAGPISTVRCFEDNALLKSVLSEPGDGG 62
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+LV+DG GSL A++G A++NGWAG+++NG +RD + G DIG++AL ++P K+
Sbjct: 63 ILVIDGAGSLHTALVGDVIAELARSNGWAGLIINGAVRDSAALRGMDIGIKALGTNPRKS 122
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K G GE+ V IT+GG GE Y+D DGI++
Sbjct: 123 TKTGAGERDVEITLGGVTFVPGEIAYSDDDGIVV 156
>gi|22124210|ref|NP_667633.1| ribonuclease activity regulator protein RraA [Yersinia pestis
KIM10+]
gi|45439968|ref|NP_991507.1| ribonuclease activity regulator protein RraA [Yersinia pestis
biovar Microtus str. 91001]
gi|51594453|ref|YP_068644.1| ribonuclease activity regulator protein RraA [Yersinia
pseudotuberculosis IP 32953]
gi|108806251|ref|YP_650167.1| ribonuclease activity regulator protein RraA [Yersinia pestis
Antiqua]
gi|108813910|ref|YP_649677.1| ribonuclease activity regulator protein RraA [Yersinia pestis
Nepal516]
gi|145601045|ref|YP_001165121.1| ribonuclease activity regulator protein RraA [Yersinia pestis
Pestoides F]
gi|150260790|ref|ZP_01917518.1| ribonuclease E inhibitor protein [Yersinia pestis CA88-4125]
gi|153950904|ref|YP_001399110.1| ribonuclease activity regulator protein RraA [Yersinia
pseudotuberculosis IP 31758]
gi|162418907|ref|YP_001604746.1| ribonuclease activity regulator protein RraA [Yersinia pestis
Angola]
gi|165928415|ref|ZP_02224247.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936136|ref|ZP_02224705.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011437|ref|ZP_02232335.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213713|ref|ZP_02239748.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167402510|ref|ZP_02307964.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419190|ref|ZP_02310943.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167425977|ref|ZP_02317730.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468554|ref|ZP_02333258.1| regulator of ribonuclease activity A [Yersinia pestis FV-1]
gi|170026313|ref|YP_001722818.1| ribonuclease activity regulator protein RraA [Yersinia
pseudotuberculosis YPIII]
gi|186893441|ref|YP_001870553.1| ribonuclease activity regulator protein RraA [Yersinia
pseudotuberculosis PB1/+]
gi|218927318|ref|YP_002345193.1| ribonuclease activity regulator protein RraA [Yersinia pestis CO92]
gi|229836217|ref|ZP_04456385.1| Ribonuclease E inhibitor RraA [Yersinia pestis Pestoides A]
gi|229839956|ref|ZP_04460115.1| Ribonuclease E inhibitor RraA [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842038|ref|ZP_04462193.1| Ribonuclease E inhibitor RraA [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904436|ref|ZP_04519547.1| Ribonuclease E inhibitor RraA [Yersinia pestis Nepal516]
gi|270488702|ref|ZP_06205776.1| regulator of ribonuclease activity A [Yersinia pestis KIM D27]
gi|384137913|ref|YP_005520615.1| ribonuclease activity regulator protein RraA [Yersinia pestis
A1122]
gi|384412952|ref|YP_005622314.1| Ribonuclease E inhibitor RraA [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420565946|ref|ZP_15061772.1| regulator of ribonuclease activity A [Yersinia pestis PY-05]
gi|420571600|ref|ZP_15066910.1| regulator of ribonuclease activity A [Yersinia pestis PY-06]
gi|420582267|ref|ZP_15076589.1| regulator of ribonuclease activity A [Yersinia pestis PY-08]
gi|420587394|ref|ZP_15081226.1| regulator of ribonuclease activity A [Yersinia pestis PY-09]
gi|420592729|ref|ZP_15086025.1| regulator of ribonuclease activity A [Yersinia pestis PY-10]
gi|420603940|ref|ZP_15096038.1| regulator of ribonuclease activity A [Yersinia pestis PY-12]
gi|420614531|ref|ZP_15105572.1| regulator of ribonuclease activity A [Yersinia pestis PY-14]
gi|420640941|ref|ZP_15129234.1| regulator of ribonuclease activity A [Yersinia pestis PY-29]
gi|420646067|ref|ZP_15133942.1| regulator of ribonuclease activity A [Yersinia pestis PY-32]
gi|420651722|ref|ZP_15139004.1| regulator of ribonuclease activity A [Yersinia pestis PY-34]
gi|420683530|ref|ZP_15167725.1| regulator of ribonuclease activity A [Yersinia pestis PY-48]
gi|420699739|ref|ZP_15181997.1| regulator of ribonuclease activity A [Yersinia pestis PY-54]
gi|420705950|ref|ZP_15186896.1| regulator of ribonuclease activity A [Yersinia pestis PY-55]
gi|420722226|ref|ZP_15201239.1| regulator of ribonuclease activity A [Yersinia pestis PY-59]
gi|420727875|ref|ZP_15206258.1| regulator of ribonuclease activity A [Yersinia pestis PY-60]
gi|420738433|ref|ZP_15215784.1| regulator of ribonuclease activity A [Yersinia pestis PY-63]
gi|420749560|ref|ZP_15225413.1| regulator of ribonuclease activity A [Yersinia pestis PY-65]
gi|420754581|ref|ZP_15229935.1| regulator of ribonuclease activity A [Yersinia pestis PY-66]
gi|420770927|ref|ZP_15243978.1| regulator of ribonuclease activity A [Yersinia pestis PY-76]
gi|420787182|ref|ZP_15258370.1| regulator of ribonuclease activity A [Yersinia pestis PY-90]
gi|420808338|ref|ZP_15277440.1| regulator of ribonuclease activity A [Yersinia pestis PY-94]
gi|420814131|ref|ZP_15282614.1| regulator of ribonuclease activity A [Yersinia pestis PY-95]
gi|420830163|ref|ZP_15297072.1| regulator of ribonuclease activity A [Yersinia pestis PY-99]
gi|420856647|ref|ZP_15320613.1| regulator of ribonuclease activity A [Yersinia pestis PY-113]
gi|421761528|ref|ZP_16198328.1| ribonuclease activity regulator protein RraA [Yersinia pestis INS]
gi|21362663|sp|Q8ZJJ7.1|RRAA_YERPE RecName: Full=Regulator of ribonuclease activity A
gi|61215880|sp|Q66G87.1|RRAA_YERPS RecName: Full=Regulator of ribonuclease activity A
gi|122383818|sp|Q1CBF0.1|RRAA_YERPA RecName: Full=Regulator of ribonuclease activity A
gi|122384045|sp|Q1CD53.1|RRAA_YERPN RecName: Full=Regulator of ribonuclease activity A
gi|166230401|sp|A4TS86.1|RRAA_YERPP RecName: Full=Regulator of ribonuclease activity A
gi|166991550|sp|A7FCY2.1|RRAA_YERP3 RecName: Full=Regulator of ribonuclease activity A
gi|226703245|sp|B2JZC3.1|RRAA_YERPB RecName: Full=Regulator of ribonuclease activity A
gi|226703246|sp|A9R6C5.1|RRAA_YERPG RecName: Full=Regulator of ribonuclease activity A
gi|226703247|sp|B1JQ78.1|RRAA_YERPY RecName: Full=Regulator of ribonuclease activity A
gi|21956971|gb|AAM83884.1|AE013628_7 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Yersinia pestis
KIM10+]
gi|45434823|gb|AAS60384.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis biovar Microtus str. 91001]
gi|51587735|emb|CAH19335.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pseudotuberculosis IP 32953]
gi|108777558|gb|ABG20077.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis Nepal516]
gi|108778164|gb|ABG12222.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis Antiqua]
gi|115345929|emb|CAL18791.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis CO92]
gi|145212741|gb|ABP42148.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis Pestoides F]
gi|149290198|gb|EDM40275.1| ribonuclease E inhibitor protein [Yersinia pestis CA88-4125]
gi|152962399|gb|ABS49860.1| regulator of ribonuclease activity A [Yersinia pseudotuberculosis
IP 31758]
gi|162351722|gb|ABX85670.1| regulator of ribonuclease activity A [Yersinia pestis Angola]
gi|165915750|gb|EDR34358.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Orientalis str. IP275]
gi|165919597|gb|EDR36930.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989583|gb|EDR41884.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205115|gb|EDR49595.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166963184|gb|EDR59205.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167048126|gb|EDR59534.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055125|gb|EDR64924.1| regulator of ribonuclease activity A [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169752847|gb|ACA70365.1| regulator of ribonuclease activity A [Yersinia pseudotuberculosis
YPIII]
gi|186696467|gb|ACC87096.1| regulator of ribonuclease activity A [Yersinia pseudotuberculosis
PB1/+]
gi|229678554|gb|EEO74659.1| Ribonuclease E inhibitor RraA [Yersinia pestis Nepal516]
gi|229690348|gb|EEO82402.1| Ribonuclease E inhibitor RraA [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696322|gb|EEO86369.1| Ribonuclease E inhibitor RraA [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706665|gb|EEO92671.1| Ribonuclease E inhibitor RraA [Yersinia pestis Pestoides A]
gi|270337206|gb|EFA47983.1| regulator of ribonuclease activity A [Yersinia pestis KIM D27]
gi|320013456|gb|ADV97027.1| Ribonuclease E inhibitor RraA [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342853042|gb|AEL71595.1| ribonuclease activity regulator protein RraA [Yersinia pestis
A1122]
gi|391450088|gb|EIR09754.1| regulator of ribonuclease activity A [Yersinia pestis PY-05]
gi|391452081|gb|EIR11528.1| regulator of ribonuclease activity A [Yersinia pestis PY-06]
gi|391467052|gb|EIR25073.1| regulator of ribonuclease activity A [Yersinia pestis PY-08]
gi|391469215|gb|EIR27019.1| regulator of ribonuclease activity A [Yersinia pestis PY-09]
gi|391482916|gb|EIR39323.1| regulator of ribonuclease activity A [Yersinia pestis PY-10]
gi|391483392|gb|EIR39752.1| regulator of ribonuclease activity A [Yersinia pestis PY-12]
gi|391502031|gb|EIR56377.1| regulator of ribonuclease activity A [Yersinia pestis PY-14]
gi|391528855|gb|EIR80632.1| regulator of ribonuclease activity A [Yersinia pestis PY-29]
gi|391531791|gb|EIR83253.1| regulator of ribonuclease activity A [Yersinia pestis PY-34]
gi|391533042|gb|EIR84365.1| regulator of ribonuclease activity A [Yersinia pestis PY-32]
gi|391565266|gb|EIS13395.1| regulator of ribonuclease activity A [Yersinia pestis PY-48]
gi|391589342|gb|EIS34251.1| regulator of ribonuclease activity A [Yersinia pestis PY-55]
gi|391593071|gb|EIS37414.1| regulator of ribonuclease activity A [Yersinia pestis PY-54]
gi|391606302|gb|EIS49049.1| regulator of ribonuclease activity A [Yersinia pestis PY-60]
gi|391608895|gb|EIS51342.1| regulator of ribonuclease activity A [Yersinia pestis PY-59]
gi|391621918|gb|EIS62906.1| regulator of ribonuclease activity A [Yersinia pestis PY-63]
gi|391632330|gb|EIS71865.1| regulator of ribonuclease activity A [Yersinia pestis PY-65]
gi|391650059|gb|EIS87381.1| regulator of ribonuclease activity A [Yersinia pestis PY-66]
gi|391656271|gb|EIS92926.1| regulator of ribonuclease activity A [Yersinia pestis PY-76]
gi|391669909|gb|EIT05002.1| regulator of ribonuclease activity A [Yersinia pestis PY-90]
gi|391690308|gb|EIT23346.1| regulator of ribonuclease activity A [Yersinia pestis PY-94]
gi|391701575|gb|EIT33566.1| regulator of ribonuclease activity A [Yersinia pestis PY-95]
gi|391716238|gb|EIT46703.1| regulator of ribonuclease activity A [Yersinia pestis PY-99]
gi|391737650|gb|EIT65516.1| regulator of ribonuclease activity A [Yersinia pestis PY-113]
gi|411177850|gb|EKS47862.1| ribonuclease activity regulator protein RraA [Yersinia pestis INS]
Length = 161
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+++CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSDLCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALINAELAELALKNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI++S L +
Sbjct: 120 ADEGVGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|218551087|ref|YP_002384878.1| ribonuclease activity regulator protein RraA [Escherichia
fergusonii ATCC 35469]
gi|226703226|sp|B7LUS5.1|RRAA_ESCF3 RecName: Full=Regulator of ribonuclease activity A
gi|218358628|emb|CAQ91278.1| ribonuclease E (RNase E) inhibitor protein [Escherichia fergusonii
ATCC 35469]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELTRLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|415838298|ref|ZP_11520276.1| regulator of ribonuclease activity A [Escherichia coli RN587/1]
gi|417281840|ref|ZP_12069140.1| regulator of ribonuclease activity A [Escherichia coli 3003]
gi|425280378|ref|ZP_18671589.1| regulator of ribonuclease activity A [Escherichia coli ARS4.2123]
gi|425302840|ref|ZP_18692716.1| regulator of ribonuclease activity A [Escherichia coli 07798]
gi|323189649|gb|EFZ74928.1| regulator of ribonuclease activity A [Escherichia coli RN587/1]
gi|386246169|gb|EII87899.1| regulator of ribonuclease activity A [Escherichia coli 3003]
gi|408197245|gb|EKI22509.1| regulator of ribonuclease activity A [Escherichia coli ARS4.2123]
gi|408209968|gb|EKI34542.1| regulator of ribonuclease activity A [Escherichia coli 07798]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|117621554|ref|YP_858548.1| ribonuclease activity regulator protein RraA [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|411011643|ref|ZP_11387972.1| ribonuclease activity regulator protein RraA [Aeromonas aquariorum
AAK1]
gi|423198732|ref|ZP_17185315.1| RraA family protein [Aeromonas hydrophila SSU]
gi|117562961|gb|ABK39909.1| regulator of ribonuclease activity A [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|404629922|gb|EKB26647.1| RraA family protein [Aeromonas hydrophila SSU]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ L+P+ +G R F G I T+K FE N LIRE ++E G GR
Sbjct: 5 TSELCDIYQDMV-----DVLEPMLCSFGGRASFGGVITTVKCFESNGLIRELVKENGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIV GC+R+VD + DIG++ALA+ P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSEIATTAAENEWEGIVCYGCVREVDILEDLDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K +GE +P+ GG + LYADT G+++S L +
Sbjct: 120 DSKDVGETDLPVNFGGVTFLPDDHLYADTTGVILSPDALDI 160
>gi|423122940|ref|ZP_17110624.1| RraA family protein [Klebsiella oxytoca 10-5246]
gi|376391874|gb|EHT04542.1| RraA family protein [Klebsiella oxytoca 10-5246]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G G
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDMLEQNGRGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGS+R A++ + A N W GIVV G +R VD++ DIG++ALA+ P+ A
Sbjct: 60 ILLIDGGGSVRRALIDADLARLAVQNEWEGIVVYGAVRQVDDLEDLDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|160875169|ref|YP_001554485.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS195]
gi|378708374|ref|YP_005273268.1| ribonuclease activity A regulator [Shewanella baltica OS678]
gi|418025936|ref|ZP_12664911.1| Regulator of ribonuclease activity A [Shewanella baltica OS625]
gi|160860691|gb|ABX49225.1| regulator of ribonuclease activity A [Shewanella baltica OS195]
gi|315267363|gb|ADT94216.1| regulator of ribonuclease activity A [Shewanella baltica OS678]
gi|353534665|gb|EHC04232.1| Regulator of ribonuclease activity A [Shewanella baltica OS625]
Length = 164
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 95/145 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L+ L F+ YG +++F G IVT+K FEDN ++E L + G G+VLVVDGGGSLR A+L
Sbjct: 15 KLQLLPLAFKPYGGKRLFWGEIVTVKCFEDNSKVKEILAQDGQGKVLVVDGGGSLRRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW GIV+NGC+RDV +N +GV AL + P+K K G+ +V + +G
Sbjct: 75 GDLIAQSALDNGWQGIVINGCVRDVARLNTFSLGVYALGAMPIKTEKLDQGQINVAVDMG 134
Query: 141 GTRISDGEWLYADTDGILISRAELS 165
G ++ G LYAD +GI +S L+
Sbjct: 135 GVMVTPGMMLYADENGIAVSDEMLN 159
>gi|442610042|ref|ZP_21024768.1| Ribonuclease E inhibitor RraA [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441748489|emb|CCQ10830.1| Ribonuclease E inhibitor RraA [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 174
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 101/156 (64%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R FSG I T+K FE+N +IRE L++ G+G
Sbjct: 4 STSDLCDHFVDVV-----DVLEPMFVNFGGRSAFSGRIKTVKCFENNEMIREALQQDGSG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
++L+VDGGGS R A++ + A N W GIVV G +R VDE+ D+G++A+AS P+
Sbjct: 59 QILLVDGGGSTRRALIDIDIAELAFENNWEGIVVYGAVRHVDELEELDLGIQAIASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ G+GE +P+ G D ++LYAD+ GI+IS
Sbjct: 119 ADSVGVGEAGIPVNFAGVSFFDDDYLYADSTGIIIS 154
>gi|62182548|ref|YP_218965.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|375116900|ref|ZP_09762070.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|75479329|sp|Q57HC8.1|RRAA_SALCH RecName: Full=Regulator of ribonuclease activity A
gi|62130181|gb|AAX67884.1| putative methyltransferase in menaquinone biosynthesis protein
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322717046|gb|EFZ08617.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSIRRALVDAELARLATQNEWEGLVIYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|386743582|ref|YP_006216761.1| ribonuclease activity regulator protein RraA [Providencia stuartii
MRSN 2154]
gi|384480275|gb|AFH94070.1| ribonuclease activity regulator protein RraA [Providencia stuartii
MRSN 2154]
Length = 173
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I+T+K FEDN L+ + LEE G+GR
Sbjct: 5 TSELCD-----IYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEEDGHGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD + D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALIDAELARLAVDNHWEGIVVYGAVRQVDALMELDLGIQAIAAIPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G++LYAD GI++S LS
Sbjct: 120 PDEGIGESDIRVNFGGVTFFSGDYLYADNTGIILSEEPLST 160
>gi|15804520|ref|NP_290560.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. EDL933]
gi|15834110|ref|NP_312883.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. Sakai]
gi|16131767|ref|NP_418364.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli str.
K-12 substr. MG1655]
gi|24115223|ref|NP_709733.1| ribonuclease activity regulator protein RraA [Shigella flexneri 2a
str. 301]
gi|26250695|ref|NP_756735.1| ribonuclease activity regulator protein RraA [Escherichia coli
CFT073]
gi|30064778|ref|NP_838949.1| ribonuclease activity regulator protein RraA [Shigella flexneri 2a
str. 2457T]
gi|74314429|ref|YP_312848.1| ribonuclease activity regulator protein RraA [Shigella sonnei
Ss046]
gi|82546278|ref|YP_410225.1| ribonuclease activity regulator protein RraA [Shigella boydii
Sb227]
gi|91213470|ref|YP_543456.1| ribonuclease activity regulator protein RraA [Escherichia coli
UTI89]
gi|110644265|ref|YP_671995.1| ribonuclease activity regulator protein RraA [Escherichia coli 536]
gi|157156032|ref|YP_001465423.1| ribonuclease activity regulator protein RraA [Escherichia coli
E24377A]
gi|157163404|ref|YP_001460722.1| ribonuclease activity regulator protein RraA [Escherichia coli HS]
gi|168748772|ref|ZP_02773794.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4113]
gi|168755615|ref|ZP_02780622.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4401]
gi|168761686|ref|ZP_02786693.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4501]
gi|168768233|ref|ZP_02793240.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4486]
gi|168775234|ref|ZP_02800241.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4196]
gi|168780848|ref|ZP_02805855.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4076]
gi|168786787|ref|ZP_02811794.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC869]
gi|168799489|ref|ZP_02824496.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC508]
gi|170022060|ref|YP_001727014.1| ribonuclease activity regulator protein RraA [Escherichia coli ATCC
8739]
gi|170083399|ref|YP_001732719.1| ribonuclease activity regulator protein RraA [Escherichia coli str.
K-12 substr. DH10B]
gi|170684101|ref|YP_001746316.1| ribonuclease activity regulator protein RraA [Escherichia coli
SMS-3-5]
gi|187732110|ref|YP_001882624.1| ribonuclease activity regulator protein RraA [Shigella boydii CDC
3083-94]
gi|188495518|ref|ZP_03002788.1| regulator of ribonuclease activity A [Escherichia coli 53638]
gi|191166405|ref|ZP_03028236.1| regulator of ribonuclease activity A [Escherichia coli B7A]
gi|191172740|ref|ZP_03034278.1| regulator of ribonuclease activity A [Escherichia coli F11]
gi|193063980|ref|ZP_03045066.1| regulator of ribonuclease activity A [Escherichia coli E22]
gi|193068059|ref|ZP_03049024.1| regulator of ribonuclease activity A [Escherichia coli E110019]
gi|194427494|ref|ZP_03060043.1| regulator of ribonuclease activity A [Escherichia coli B171]
gi|194433203|ref|ZP_03065484.1| regulator of ribonuclease activity A [Shigella dysenteriae 1012]
gi|194438286|ref|ZP_03070377.1| regulator of ribonuclease activity A [Escherichia coli 101-1]
gi|195937573|ref|ZP_03082955.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. EC4024]
gi|208809692|ref|ZP_03252029.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4206]
gi|208812865|ref|ZP_03254194.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4045]
gi|208821591|ref|ZP_03261911.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4042]
gi|209397118|ref|YP_002273449.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. EC4115]
gi|209921409|ref|YP_002295493.1| ribonuclease activity regulator protein RraA [Escherichia coli
SE11]
gi|215489260|ref|YP_002331691.1| ribonuclease activity regulator protein RraA [Escherichia coli
O127:H6 str. E2348/69]
gi|217324726|ref|ZP_03440810.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
TW14588]
gi|218556491|ref|YP_002389405.1| ribonuclease activity regulator protein RraA [Escherichia coli
IAI1]
gi|218560996|ref|YP_002393909.1| ribonuclease activity regulator protein RraA [Escherichia coli S88]
gi|218692213|ref|YP_002400425.1| ribonuclease activity regulator protein RraA [Escherichia coli
ED1a]
gi|218697643|ref|YP_002405310.1| ribonuclease activity regulator protein RraA [Escherichia coli
55989]
gi|218701366|ref|YP_002408995.1| ribonuclease activity regulator protein RraA [Escherichia coli
IAI39]
gi|218707555|ref|YP_002415074.1| ribonuclease activity regulator protein RraA [Escherichia coli
UMN026]
gi|222158636|ref|YP_002558775.1| Regulator of ribonuclease activity A [Escherichia coli LF82]
gi|227885329|ref|ZP_04003134.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Escherichia coli 83972]
gi|237702962|ref|ZP_04533443.1| ribonuclease activity regulator protein RraA [Escherichia sp.
3_2_53FAA]
gi|238902995|ref|YP_002928791.1| ribonuclease activity regulator protein RraA [Escherichia coli
BW2952]
gi|251787192|ref|YP_003001496.1| ribonuclease E inhibitor protein, subunit of ribonuclease E
inhibitor protein A [Escherichia coli BL21(DE3)]
gi|253775432|ref|YP_003038263.1| ribonuclease activity regulator protein RraA [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163879|ref|YP_003046987.1| ribonuclease activity regulator protein RraA [Escherichia coli B
str. REL606]
gi|254290630|ref|YP_003056378.1| ribonuclease activity regulator protein RraA [Escherichia coli
BL21(DE3)]
gi|254795931|ref|YP_003080768.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. TW14359]
gi|260846651|ref|YP_003224429.1| ribonuclease E inhibitor protein RraA [Escherichia coli O103:H2
str. 12009]
gi|260857670|ref|YP_003231561.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. 11368]
gi|260870648|ref|YP_003237050.1| ribonuclease E inhibitor protein RraA [Escherichia coli O111:H-
str. 11128]
gi|261223563|ref|ZP_05937844.1| ribonuclease E inhibitor protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257325|ref|ZP_05949858.1| ribonuclease E inhibitor protein RraA [Escherichia coli O157:H7
str. FRIK966]
gi|291285344|ref|YP_003502162.1| regulator of ribonuclease activity A [Escherichia coli O55:H7 str.
CB9615]
gi|293407549|ref|ZP_06651468.1| ribonuclease activity A regulator protein [Escherichia coli
FVEC1412]
gi|293413369|ref|ZP_06656030.1| hypothetical protein ECEG_04257 [Escherichia coli B354]
gi|293417434|ref|ZP_06660058.1| hypothetical protein ECDG_04504 [Escherichia coli B185]
gi|293470242|ref|ZP_06664653.1| hypothetical protein ECCG_04487 [Escherichia coli B088]
gi|298383297|ref|ZP_06992890.1| ribonuclease activity A [Escherichia coli FVEC1302]
gi|300819901|ref|ZP_07100085.1| regulator of ribonuclease activity A [Escherichia coli MS 107-1]
gi|300825080|ref|ZP_07105175.1| regulator of ribonuclease activity A [Escherichia coli MS 119-7]
gi|300899907|ref|ZP_07118115.1| regulator of ribonuclease activity A [Escherichia coli MS 198-1]
gi|300906257|ref|ZP_07123966.1| regulator of ribonuclease activity A [Escherichia coli MS 84-1]
gi|300919127|ref|ZP_07135664.1| regulator of ribonuclease activity A [Escherichia coli MS 115-1]
gi|300921949|ref|ZP_07138098.1| regulator of ribonuclease activity A [Escherichia coli MS 182-1]
gi|300931629|ref|ZP_07146939.1| regulator of ribonuclease activity A [Escherichia coli MS 187-1]
gi|300938387|ref|ZP_07153134.1| regulator of ribonuclease activity A [Escherichia coli MS 21-1]
gi|300948291|ref|ZP_07162406.1| regulator of ribonuclease activity A [Escherichia coli MS 116-1]
gi|300954658|ref|ZP_07167099.1| regulator of ribonuclease activity A [Escherichia coli MS 175-1]
gi|300975840|ref|ZP_07173189.1| regulator of ribonuclease activity A [Escherichia coli MS 45-1]
gi|300986106|ref|ZP_07177720.1| regulator of ribonuclease activity A [Escherichia coli MS 200-1]
gi|301022809|ref|ZP_07186650.1| regulator of ribonuclease activity A [Escherichia coli MS 69-1]
gi|301024058|ref|ZP_07187773.1| regulator of ribonuclease activity A [Escherichia coli MS 196-1]
gi|301048657|ref|ZP_07195669.1| regulator of ribonuclease activity A [Escherichia coli MS 185-1]
gi|301303407|ref|ZP_07209531.1| regulator of ribonuclease activity A [Escherichia coli MS 124-1]
gi|301328289|ref|ZP_07221405.1| regulator of ribonuclease activity A [Escherichia coli MS 78-1]
gi|301645120|ref|ZP_07245078.1| regulator of ribonuclease activity A [Escherichia coli MS 146-1]
gi|306813807|ref|ZP_07447983.1| ribonuclease activity regulator protein RraA [Escherichia coli
NC101]
gi|307315164|ref|ZP_07594745.1| regulator of ribonuclease activity A [Escherichia coli W]
gi|309796642|ref|ZP_07691048.1| regulator of ribonuclease activity A [Escherichia coli MS 145-7]
gi|312971783|ref|ZP_07785957.1| regulator of ribonuclease activity A [Escherichia coli 1827-70]
gi|331644667|ref|ZP_08345786.1| regulator of ribonuclease activity A [Escherichia coli H736]
gi|331649783|ref|ZP_08350863.1| regulator of ribonuclease activity A [Escherichia coli M605]
gi|331655627|ref|ZP_08356619.1| regulator of ribonuclease activity A [Escherichia coli M718]
gi|331660484|ref|ZP_08361418.1| regulator of ribonuclease activity A [Escherichia coli TA206]
gi|331665584|ref|ZP_08366482.1| regulator of ribonuclease activity A [Escherichia coli TA143]
gi|331670782|ref|ZP_08371618.1| regulator of ribonuclease activity A [Escherichia coli TA271]
gi|331675424|ref|ZP_08376174.1| regulator of ribonuclease activity A [Escherichia coli TA280]
gi|331680046|ref|ZP_08380708.1| regulator of ribonuclease activity A [Escherichia coli H591]
gi|332282815|ref|ZP_08395228.1| ribonuclease E (RNase E) inhibitor protein [Shigella sp. D9]
gi|366158170|ref|ZP_09458032.1| ribonuclease activity regulator protein RraA [Escherichia sp.
TW09308]
gi|378715114|ref|YP_005280007.1| ribonuclease activity A regulator [Escherichia coli KO11FL]
gi|383181231|ref|YP_005459236.1| ribonuclease activity regulator protein RraA [Shigella sonnei 53G]
gi|384545536|ref|YP_005729600.1| Regulator of ribonuclease activity A [Shigella flexneri 2002017]
gi|386282411|ref|ZP_10060062.1| RraA family protein [Escherichia sp. 4_1_40B]
gi|386597545|ref|YP_006093945.1| ribonuclease activity A regulator [Escherichia coli DH1]
gi|386601967|ref|YP_006103473.1| ribonuclease activity A regulator [Escherichia coli IHE3034]
gi|386606520|ref|YP_006112820.1| ribonuclease activity regulator protein RraA [Escherichia coli
UM146]
gi|386611343|ref|YP_006126829.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli W]
gi|386616756|ref|YP_006136422.1| regulator of ribonuclease activity RraA [Escherichia coli UMNK88]
gi|386626841|ref|YP_006146569.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli O7:K1
str. CE10]
gi|386631896|ref|YP_006151616.1| ribonuclease activity regulator protein RraA [Escherichia coli str.
'clone D i2']
gi|386636816|ref|YP_006156535.1| ribonuclease activity regulator protein RraA [Escherichia coli str.
'clone D i14']
gi|386641580|ref|YP_006108378.1| ribonuclease activity A regulator [Escherichia coli ABU 83972]
gi|386699044|ref|YP_006162881.1| ribonuclease activity regulator protein RraA [Escherichia coli
KO11FL]
gi|386707180|ref|YP_006171027.1| Regulator of ribonuclease activity A [Escherichia coli P12b]
gi|386711882|ref|YP_006175603.1| ribonuclease activity regulator protein RraA [Escherichia coli W]
gi|387509380|ref|YP_006161636.1| ribonuclease activity regulator protein RraA [Escherichia coli
O55:H7 str. RM12579]
gi|387609729|ref|YP_006098585.1| ribonuclease activity A regulator [Escherichia coli 042]
gi|387614618|ref|YP_006117734.1| ribonuclease activity A regulator [Escherichia coli ETEC H10407]
gi|387619243|ref|YP_006122265.1| ribonuclease activity regulator protein RraA [Escherichia coli
O83:H1 str. NRG 857C]
gi|387623571|ref|YP_006131199.1| ribonuclease activity A regulator [Escherichia coli DH1]
gi|387831842|ref|YP_003351779.1| menaquinone biosynthesis protein [Escherichia coli SE15]
gi|387885154|ref|YP_006315456.1| ribonuclease activity regulator protein RraA [Escherichia coli
Xuzhou21]
gi|388479330|ref|YP_491522.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli str.
K-12 substr. W3110]
gi|404377360|ref|ZP_10982494.1| RraA family protein [Escherichia sp. 1_1_43]
gi|407466935|ref|YP_006786623.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407484340|ref|YP_006781490.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410484886|ref|YP_006772432.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|414578813|ref|ZP_11435974.1| regulator of ribonuclease activity A [Shigella sonnei 3233-85]
gi|415775609|ref|ZP_11487333.1| regulator of ribonuclease activity A [Escherichia coli 3431]
gi|415788204|ref|ZP_11494495.1| regulator of ribonuclease activity A [Escherichia coli EPECa14]
gi|415799575|ref|ZP_11498849.1| regulator of ribonuclease activity A [Escherichia coli E128010]
gi|415810294|ref|ZP_11502732.1| regulator of ribonuclease activity A [Escherichia coli LT-68]
gi|415821989|ref|ZP_11510770.1| regulator of ribonuclease activity A [Escherichia coli OK1180]
gi|415831727|ref|ZP_11517306.1| regulator of ribonuclease activity A [Escherichia coli OK1357]
gi|415846573|ref|ZP_11525595.1| regulator of ribonuclease activity A [Shigella sonnei 53G]
gi|415856864|ref|ZP_11531708.1| regulator of ribonuclease activity A [Shigella flexneri 2a str.
2457T]
gi|415865275|ref|ZP_11538160.1| regulator of ribonuclease activity A [Escherichia coli MS 85-1]
gi|415879698|ref|ZP_11544889.1| regulator of ribonuclease activity A [Escherichia coli MS 79-10]
gi|416315325|ref|ZP_11659263.1| Ribonuclease E inhibitor RraA [Escherichia coli O157:H7 str. 1044]
gi|416319615|ref|ZP_11662167.1| Ribonuclease E inhibitor RraA [Escherichia coli O157:H7 str.
EC1212]
gi|416328045|ref|ZP_11667914.1| Ribonuclease E inhibitor RraA [Escherichia coli O157:H7 str. 1125]
gi|416334741|ref|ZP_11671483.1| Ribonuclease E inhibitor RraA [Escherichia coli WV_060327]
gi|416345216|ref|ZP_11678809.1| Ribonuclease E inhibitor RraA [Escherichia coli EC4100B]
gi|416778966|ref|ZP_11876212.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. G5101]
gi|416790276|ref|ZP_11881101.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H- str. 493-89]
gi|416802047|ref|ZP_11885989.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H- str. H 2687]
gi|416812890|ref|ZP_11890913.1| ribonuclease activity regulator protein RraA [Escherichia coli
O55:H7 str. 3256-97]
gi|416823375|ref|ZP_11895531.1| ribonuclease activity regulator protein RraA [Escherichia coli
O55:H7 str. USDA 5905]
gi|416833710|ref|ZP_11900526.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. LSU-61]
gi|417121981|ref|ZP_11971354.1| regulator of ribonuclease activity A [Escherichia coli 97.0246]
gi|417134275|ref|ZP_11979060.1| regulator of ribonuclease activity A [Escherichia coli 5.0588]
gi|417142237|ref|ZP_11984812.1| regulator of ribonuclease activity A [Escherichia coli 97.0259]
gi|417148980|ref|ZP_11989071.1| regulator of ribonuclease activity A [Escherichia coli 1.2264]
gi|417158432|ref|ZP_11996056.1| regulator of ribonuclease activity A [Escherichia coli 96.0497]
gi|417161217|ref|ZP_11997550.1| regulator of ribonuclease activity A [Escherichia coli 99.0741]
gi|417176165|ref|ZP_12005961.1| regulator of ribonuclease activity A [Escherichia coli 3.2608]
gi|417185658|ref|ZP_12011059.1| regulator of ribonuclease activity A [Escherichia coli 93.0624]
gi|417202058|ref|ZP_12018308.1| regulator of ribonuclease activity A [Escherichia coli 4.0522]
gi|417208203|ref|ZP_12020222.1| regulator of ribonuclease activity A [Escherichia coli JB1-95]
gi|417239292|ref|ZP_12036367.1| regulator of ribonuclease activity A [Escherichia coli 9.0111]
gi|417249512|ref|ZP_12041296.1| regulator of ribonuclease activity A [Escherichia coli 4.0967]
gi|417270793|ref|ZP_12058144.1| regulator of ribonuclease activity A [Escherichia coli 2.4168]
gi|417277346|ref|ZP_12064670.1| regulator of ribonuclease activity A [Escherichia coli 3.2303]
gi|417293945|ref|ZP_12081224.1| regulator of ribonuclease activity A [Escherichia coli B41]
gi|417296444|ref|ZP_12083691.1| regulator of ribonuclease activity A [Escherichia coli 900105
(10e)]
gi|417589122|ref|ZP_12239882.1| regulator of ribonuclease activity A [Escherichia coli
STEC_C165-02]
gi|417599376|ref|ZP_12249998.1| regulator of ribonuclease activity A [Escherichia coli 3030-1]
gi|417604840|ref|ZP_12255401.1| regulator of ribonuclease activity A [Escherichia coli STEC_94C]
gi|417610696|ref|ZP_12261184.1| regulator of ribonuclease activity A [Escherichia coli
STEC_DG131-3]
gi|417615596|ref|ZP_12266043.1| regulator of ribonuclease activity A [Escherichia coli STEC_EH250]
gi|417620617|ref|ZP_12271015.1| regulator of ribonuclease activity A [Escherichia coli G58-1]
gi|417626113|ref|ZP_12276400.1| regulator of ribonuclease activity A [Escherichia coli STEC_H.1.8]
gi|417636890|ref|ZP_12287094.1| regulator of ribonuclease activity A [Escherichia coli STEC_S1191]
gi|417641953|ref|ZP_12292075.1| regulator of ribonuclease activity A [Escherichia coli TX1999]
gi|417664576|ref|ZP_12314155.1| ribonuclease E inhibitor RraA [Escherichia coli AA86]
gi|417669526|ref|ZP_12319060.1| regulator of ribonuclease activity A [Escherichia coli STEC_O31]
gi|417674893|ref|ZP_12324323.1| regulator of ribonuclease activity A [Shigella dysenteriae 155-74]
gi|417684728|ref|ZP_12334063.1| regulator of ribonuclease activity A [Shigella boydii 3594-74]
gi|417692398|ref|ZP_12341596.1| regulator of ribonuclease activity A [Shigella boydii 5216-82]
gi|417807618|ref|ZP_12454545.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. LB226692]
gi|417835360|ref|ZP_12481799.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 01-09591]
gi|417867835|ref|ZP_12512869.1| hypothetical protein C22711_4760 [Escherichia coli O104:H4 str.
C227-11]
gi|417944917|ref|ZP_12588155.1| ribonuclease activity regulator protein RraA [Escherichia coli
XH140A]
gi|417976814|ref|ZP_12617604.1| ribonuclease activity regulator protein RraA [Escherichia coli
XH001]
gi|418040174|ref|ZP_12678423.1| ribonuclease activity regulator protein RraA [Escherichia coli W26]
gi|418270239|ref|ZP_12888231.1| regulator of ribonuclease activity A [Shigella sonnei str. Moseley]
gi|418943365|ref|ZP_13496562.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H43 str. T22]
gi|418999461|ref|ZP_13547035.1| regulator of ribonuclease activity A [Escherichia coli DEC1A]
gi|419004756|ref|ZP_13552262.1| regulator of ribonuclease activity A [Escherichia coli DEC1B]
gi|419065243|ref|ZP_13611949.1| regulator of ribonuclease activity A [Escherichia coli DEC3D]
gi|419078050|ref|ZP_13623545.1| regulator of ribonuclease activity A [Escherichia coli DEC3F]
gi|419083290|ref|ZP_13628729.1| regulator of ribonuclease activity A [Escherichia coli DEC4A]
gi|419095183|ref|ZP_13640455.1| regulator of ribonuclease activity A [Escherichia coli DEC4C]
gi|419100909|ref|ZP_13646093.1| regulator of ribonuclease activity A [Escherichia coli DEC4D]
gi|419111970|ref|ZP_13657018.1| regulator of ribonuclease activity A [Escherichia coli DEC4F]
gi|419117504|ref|ZP_13662509.1| regulator of ribonuclease activity A [Escherichia coli DEC5A]
gi|419123231|ref|ZP_13668169.1| regulator of ribonuclease activity A [Escherichia coli DEC5B]
gi|419128737|ref|ZP_13673603.1| regulator of ribonuclease activity A [Escherichia coli DEC5C]
gi|419134236|ref|ZP_13679055.1| regulator of ribonuclease activity A [Escherichia coli DEC5D]
gi|419139349|ref|ZP_13684136.1| regulator of ribonuclease activity A [Escherichia coli DEC5E]
gi|419145041|ref|ZP_13689766.1| regulator of ribonuclease activity A [Escherichia coli DEC6A]
gi|419150874|ref|ZP_13695518.1| regulator of ribonuclease activity A [Escherichia coli DEC6B]
gi|419156452|ref|ZP_13701004.1| regulator of ribonuclease activity A [Escherichia coli DEC6C]
gi|419161804|ref|ZP_13706292.1| regulator of ribonuclease activity A [Escherichia coli DEC6D]
gi|419199727|ref|ZP_13743013.1| regulator of ribonuclease activity A [Escherichia coli DEC8A]
gi|419212466|ref|ZP_13755527.1| regulator of ribonuclease activity A [Escherichia coli DEC8C]
gi|419218263|ref|ZP_13761251.1| regulator of ribonuclease activity A [Escherichia coli DEC8D]
gi|419224041|ref|ZP_13766949.1| regulator of ribonuclease activity A [Escherichia coli DEC8E]
gi|419246088|ref|ZP_13788716.1| regulator of ribonuclease activity A [Escherichia coli DEC9D]
gi|419257266|ref|ZP_13799764.1| regulator of ribonuclease activity A [Escherichia coli DEC10A]
gi|419263368|ref|ZP_13805774.1| regulator of ribonuclease activity A [Escherichia coli DEC10B]
gi|419274864|ref|ZP_13817150.1| regulator of ribonuclease activity A [Escherichia coli DEC10D]
gi|419280269|ref|ZP_13822509.1| regulator of ribonuclease activity A [Escherichia coli DEC10E]
gi|419292155|ref|ZP_13834236.1| regulator of ribonuclease activity A [Escherichia coli DEC11A]
gi|419297478|ref|ZP_13839511.1| regulator of ribonuclease activity A [Escherichia coli DEC11B]
gi|419309017|ref|ZP_13850903.1| regulator of ribonuclease activity A [Escherichia coli DEC11D]
gi|419313977|ref|ZP_13855831.1| regulator of ribonuclease activity A [Escherichia coli DEC11E]
gi|419319435|ref|ZP_13861228.1| regulator of ribonuclease activity A [Escherichia coli DEC12A]
gi|419325700|ref|ZP_13867381.1| regulator of ribonuclease activity A [Escherichia coli DEC12B]
gi|419331655|ref|ZP_13873244.1| regulator of ribonuclease activity A [Escherichia coli DEC12C]
gi|419342524|ref|ZP_13883974.1| regulator of ribonuclease activity A [Escherichia coli DEC12E]
gi|419347763|ref|ZP_13889126.1| regulator of ribonuclease activity A [Escherichia coli DEC13A]
gi|419352222|ref|ZP_13893547.1| regulator of ribonuclease activity A [Escherichia coli DEC13B]
gi|419357696|ref|ZP_13898940.1| regulator of ribonuclease activity A [Escherichia coli DEC13C]
gi|419362667|ref|ZP_13903871.1| regulator of ribonuclease activity A [Escherichia coli DEC13D]
gi|419367750|ref|ZP_13908896.1| regulator of ribonuclease activity A [Escherichia coli DEC13E]
gi|419378118|ref|ZP_13919130.1| regulator of ribonuclease activity A [Escherichia coli DEC14B]
gi|419383510|ref|ZP_13924446.1| regulator of ribonuclease activity A [Escherichia coli DEC14C]
gi|419393687|ref|ZP_13934487.1| regulator of ribonuclease activity A [Escherichia coli DEC15A]
gi|419399378|ref|ZP_13940136.1| regulator of ribonuclease activity A [Escherichia coli DEC15B]
gi|419404621|ref|ZP_13945335.1| regulator of ribonuclease activity A [Escherichia coli DEC15C]
gi|419415350|ref|ZP_13955978.1| regulator of ribonuclease activity A [Escherichia coli DEC15E]
gi|419702788|ref|ZP_14230374.1| ribonuclease activity regulator protein RraA [Escherichia coli
SCI-07]
gi|419811940|ref|ZP_14336811.1| ribonuclease activity regulator protein RraA [Escherichia coli
O32:H37 str. P4]
gi|419866556|ref|ZP_14388914.1| ribonuclease activity regulator protein RraA [Escherichia coli
O103:H25 str. CVM9340]
gi|419870996|ref|ZP_14393061.1| ribonuclease activity regulator protein RraA [Escherichia coli
O103:H2 str. CVM9450]
gi|419875975|ref|ZP_14397767.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9534]
gi|419882912|ref|ZP_14404088.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9545]
gi|419888624|ref|ZP_14409109.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9570]
gi|419896945|ref|ZP_14416563.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9574]
gi|419902118|ref|ZP_14421388.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM9942]
gi|419908698|ref|ZP_14427377.1| ribonuclease activity A regulator [Escherichia coli O26:H11 str.
CVM10026]
gi|419912039|ref|ZP_14430499.1| ribonuclease activity regulator protein RraA [Escherichia coli KD1]
gi|419921063|ref|ZP_14439158.1| ribonuclease activity regulator protein RraA [Escherichia coli KD2]
gi|419926077|ref|ZP_14443880.1| ribonuclease activity regulator protein RraA [Escherichia coli
541-15]
gi|419927787|ref|ZP_14445519.1| ribonuclease activity regulator protein RraA [Escherichia coli
541-1]
gi|419931923|ref|ZP_14449295.1| ribonuclease activity regulator protein RraA [Escherichia coli
576-1]
gi|419938135|ref|ZP_14454978.1| ribonuclease activity regulator protein RraA [Escherichia coli 75]
gi|419944259|ref|ZP_14460765.1| ribonuclease activity regulator protein RraA [Escherichia coli
HM605]
gi|419947733|ref|ZP_14464049.1| ribonuclease activity regulator protein RraA [Escherichia coli
CUMT8]
gi|420088929|ref|ZP_14600788.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9602]
gi|420095938|ref|ZP_14607395.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9634]
gi|420101512|ref|ZP_14612603.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9455]
gi|420108560|ref|ZP_14618804.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9553]
gi|420115571|ref|ZP_14625103.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM10021]
gi|420121768|ref|ZP_14630833.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM10030]
gi|420128100|ref|ZP_14636662.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM10224]
gi|420134004|ref|ZP_14642162.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM9952]
gi|420272416|ref|ZP_14774761.1| regulator of ribonuclease activity A [Escherichia coli PA22]
gi|420278076|ref|ZP_14780352.1| regulator of ribonuclease activity A [Escherichia coli PA40]
gi|420280186|ref|ZP_14782439.1| regulator of ribonuclease activity A [Escherichia coli TW06591]
gi|420289444|ref|ZP_14791623.1| regulator of ribonuclease activity A [Escherichia coli TW10246]
gi|420295127|ref|ZP_14797233.1| regulator of ribonuclease activity A [Escherichia coli TW11039]
gi|420301079|ref|ZP_14803119.1| regulator of ribonuclease activity A [Escherichia coli TW09109]
gi|420306966|ref|ZP_14808950.1| regulator of ribonuclease activity A [Escherichia coli TW10119]
gi|420312289|ref|ZP_14814213.1| regulator of ribonuclease activity A [Escherichia coli EC1738]
gi|420317956|ref|ZP_14819823.1| regulator of ribonuclease activity A [Escherichia coli EC1734]
gi|420349894|ref|ZP_14851260.1| regulator of ribonuclease activity A [Shigella boydii 965-58]
gi|420361374|ref|ZP_14862314.1| regulator of ribonuclease activity A [Shigella sonnei 3226-85]
gi|420365933|ref|ZP_14866789.1| regulator of ribonuclease activity A [Shigella sonnei 4822-66]
gi|420376307|ref|ZP_14876075.1| regulator of ribonuclease activity A [Shigella flexneri 1235-66]
gi|420394077|ref|ZP_14893318.1| regulator of ribonuclease activity A [Escherichia coli EPEC
C342-62]
gi|421777728|ref|ZP_16214320.1| ribonuclease activity regulator protein RraA [Escherichia coli
AD30]
gi|421815008|ref|ZP_16250705.1| regulator of ribonuclease activity A [Escherichia coli 8.0416]
gi|421820742|ref|ZP_16256223.1| regulator of ribonuclease activity A [Escherichia coli 10.0821]
gi|421826720|ref|ZP_16262071.1| regulator of ribonuclease activity A [Escherichia coli FRIK920]
gi|421827590|ref|ZP_16262929.1| regulator of ribonuclease activity A [Escherichia coli PA7]
gi|422334835|ref|ZP_16415839.1| RraA family protein [Escherichia coli 4_1_47FAA]
gi|422351370|ref|ZP_16432189.1| regulator of ribonuclease activity A [Escherichia coli MS 117-3]
gi|422356547|ref|ZP_16437227.1| regulator of ribonuclease activity A [Escherichia coli MS 110-3]
gi|422364568|ref|ZP_16445084.1| regulator of ribonuclease activity A [Escherichia coli MS 153-1]
gi|422369808|ref|ZP_16450204.1| regulator of ribonuclease activity A [Escherichia coli MS 16-3]
gi|422376184|ref|ZP_16456437.1| regulator of ribonuclease activity A [Escherichia coli MS 60-1]
gi|422382048|ref|ZP_16462210.1| regulator of ribonuclease activity A [Escherichia coli MS 57-2]
gi|422751973|ref|ZP_16805879.1| RraA family protein [Escherichia coli H252]
gi|422757282|ref|ZP_16811102.1| RraA family protein [Escherichia coli H263]
gi|422764437|ref|ZP_16818186.1| RraA family protein [Escherichia coli E1167]
gi|422769011|ref|ZP_16822734.1| RraA family protein [Escherichia coli E1520]
gi|422773811|ref|ZP_16827493.1| RraA family protein [Escherichia coli E482]
gi|422778727|ref|ZP_16832373.1| RraA family protein [Escherichia coli H120]
gi|422784626|ref|ZP_16837405.1| RraA family protein [Escherichia coli TW10509]
gi|422789004|ref|ZP_16841737.1| RraA family protein [Escherichia coli H489]
gi|422793772|ref|ZP_16846466.1| RraA family protein [Escherichia coli TA007]
gi|422803213|ref|ZP_16851703.1| RraA family protein [Escherichia coli M863]
gi|422807605|ref|ZP_16856034.1| RraA family protein [Escherichia fergusonii B253]
gi|422819078|ref|ZP_16867290.1| RraA family protein [Escherichia coli M919]
gi|422830648|ref|ZP_16878803.1| regulator-ribonuclease activity A [Escherichia coli B093]
gi|422835482|ref|ZP_16883537.1| regulator-ribonuclease activity A [Escherichia coli E101]
gi|422841850|ref|ZP_16889818.1| regulator-ribonuclease activity A [Escherichia coli H397]
gi|422963640|ref|ZP_16973254.1| RraA family protein [Escherichia coli H494]
gi|422976116|ref|ZP_16976952.1| RraA family protein [Escherichia coli TA124]
gi|422990194|ref|ZP_16980966.1| RraA family protein [Escherichia coli O104:H4 str. C227-11]
gi|422997091|ref|ZP_16987853.1| RraA family protein [Escherichia coli O104:H4 str. C236-11]
gi|423002187|ref|ZP_16992938.1| RraA family protein [Escherichia coli O104:H4 str. 09-7901]
gi|423005842|ref|ZP_16996587.1| RraA family protein [Escherichia coli O104:H4 str. 04-8351]
gi|423012403|ref|ZP_17003135.1| RraA family protein [Escherichia coli O104:H4 str. 11-3677]
gi|423021634|ref|ZP_17012339.1| RraA family protein [Escherichia coli O104:H4 str. 11-4404]
gi|423026791|ref|ZP_17017485.1| RraA family protein [Escherichia coli O104:H4 str. 11-4522]
gi|423032619|ref|ZP_17023305.1| RraA family protein [Escherichia coli O104:H4 str. 11-4623]
gi|423035494|ref|ZP_17026170.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423040615|ref|ZP_17031283.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423047300|ref|ZP_17037958.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423055838|ref|ZP_17044644.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423057842|ref|ZP_17046640.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423703487|ref|ZP_17677919.1| RraA family protein [Escherichia coli H730]
gi|423708240|ref|ZP_17682620.1| RraA family protein [Escherichia coli B799]
gi|424080273|ref|ZP_17817210.1| regulator of ribonuclease activity A [Escherichia coli FDA505]
gi|424099770|ref|ZP_17835005.1| regulator of ribonuclease activity A [Escherichia coli FRIK1985]
gi|424105966|ref|ZP_17840678.1| regulator of ribonuclease activity A [Escherichia coli FRIK1990]
gi|424112604|ref|ZP_17846813.1| regulator of ribonuclease activity A [Escherichia coli 93-001]
gi|424118537|ref|ZP_17852354.1| regulator of ribonuclease activity A [Escherichia coli PA3]
gi|424124737|ref|ZP_17858016.1| regulator of ribonuclease activity A [Escherichia coli PA5]
gi|424130901|ref|ZP_17863786.1| regulator of ribonuclease activity A [Escherichia coli PA9]
gi|424137215|ref|ZP_17869633.1| regulator of ribonuclease activity A [Escherichia coli PA10]
gi|424143771|ref|ZP_17875605.1| regulator of ribonuclease activity A [Escherichia coli PA14]
gi|424150139|ref|ZP_17881497.1| regulator of ribonuclease activity A [Escherichia coli PA15]
gi|424163867|ref|ZP_17886917.1| regulator of ribonuclease activity A [Escherichia coli PA24]
gi|424257808|ref|ZP_17892458.1| regulator of ribonuclease activity A [Escherichia coli PA25]
gi|424336208|ref|ZP_17898396.1| regulator of ribonuclease activity A [Escherichia coli PA28]
gi|424452476|ref|ZP_17904100.1| regulator of ribonuclease activity A [Escherichia coli PA32]
gi|424458638|ref|ZP_17909717.1| regulator of ribonuclease activity A [Escherichia coli PA33]
gi|424465171|ref|ZP_17915468.1| regulator of ribonuclease activity A [Escherichia coli PA39]
gi|424471405|ref|ZP_17921185.1| regulator of ribonuclease activity A [Escherichia coli PA41]
gi|424477892|ref|ZP_17927190.1| regulator of ribonuclease activity A [Escherichia coli PA42]
gi|424483674|ref|ZP_17932637.1| regulator of ribonuclease activity A [Escherichia coli TW07945]
gi|424489868|ref|ZP_17938387.1| regulator of ribonuclease activity A [Escherichia coli TW09098]
gi|424496576|ref|ZP_17944078.1| regulator of ribonuclease activity A [Escherichia coli TW09195]
gi|424503190|ref|ZP_17950056.1| regulator of ribonuclease activity A [Escherichia coli EC4203]
gi|424509462|ref|ZP_17955811.1| regulator of ribonuclease activity A [Escherichia coli EC4196]
gi|424516866|ref|ZP_17961431.1| regulator of ribonuclease activity A [Escherichia coli TW14313]
gi|424522995|ref|ZP_17967082.1| regulator of ribonuclease activity A [Escherichia coli TW14301]
gi|424528866|ref|ZP_17972560.1| regulator of ribonuclease activity A [Escherichia coli EC4421]
gi|424535009|ref|ZP_17978340.1| regulator of ribonuclease activity A [Escherichia coli EC4422]
gi|424541096|ref|ZP_17984023.1| regulator of ribonuclease activity A [Escherichia coli EC4013]
gi|424547243|ref|ZP_17989555.1| regulator of ribonuclease activity A [Escherichia coli EC4402]
gi|424559642|ref|ZP_18001018.1| regulator of ribonuclease activity A [Escherichia coli EC4436]
gi|424565964|ref|ZP_18006949.1| regulator of ribonuclease activity A [Escherichia coli EC4437]
gi|424572092|ref|ZP_18012608.1| regulator of ribonuclease activity A [Escherichia coli EC4448]
gi|424578249|ref|ZP_18018265.1| regulator of ribonuclease activity A [Escherichia coli EC1845]
gi|424584073|ref|ZP_18023702.1| regulator of ribonuclease activity A [Escherichia coli EC1863]
gi|424753634|ref|ZP_18181571.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424764460|ref|ZP_18191886.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424773671|ref|ZP_18200727.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CFSAN001632]
gi|424818313|ref|ZP_18243464.1| ribonuclease activity regulator protein RraA [Escherichia
fergusonii ECD227]
gi|425100746|ref|ZP_18503465.1| regulator of ribonuclease activity A [Escherichia coli 3.4870]
gi|425106823|ref|ZP_18509121.1| regulator of ribonuclease activity A [Escherichia coli 5.2239]
gi|425112822|ref|ZP_18514726.1| regulator of ribonuclease activity A [Escherichia coli 6.0172]
gi|425117562|ref|ZP_18519332.1| regulator of ribonuclease activity A [Escherichia coli 8.0566]
gi|425122277|ref|ZP_18523945.1| regulator of ribonuclease activity A [Escherichia coli 8.0569]
gi|425128751|ref|ZP_18529904.1| regulator of ribonuclease activity A [Escherichia coli 8.0586]
gi|425134517|ref|ZP_18535352.1| regulator of ribonuclease activity A [Escherichia coli 8.2524]
gi|425141112|ref|ZP_18541476.1| regulator of ribonuclease activity A [Escherichia coli 10.0833]
gi|425146789|ref|ZP_18546765.1| regulator of ribonuclease activity A [Escherichia coli 10.0869]
gi|425152902|ref|ZP_18552499.1| regulator of ribonuclease activity A [Escherichia coli 88.0221]
gi|425158800|ref|ZP_18558046.1| regulator of ribonuclease activity A [Escherichia coli PA34]
gi|425165120|ref|ZP_18563990.1| regulator of ribonuclease activity A [Escherichia coli FDA506]
gi|425170869|ref|ZP_18569326.1| regulator of ribonuclease activity A [Escherichia coli FDA507]
gi|425182973|ref|ZP_18580653.1| regulator of ribonuclease activity A [Escherichia coli FRIK1999]
gi|425189274|ref|ZP_18586528.1| regulator of ribonuclease activity A [Escherichia coli FRIK1997]
gi|425202479|ref|ZP_18598671.1| regulator of ribonuclease activity A [Escherichia coli NE037]
gi|425208858|ref|ZP_18604639.1| regulator of ribonuclease activity A [Escherichia coli FRIK2001]
gi|425214635|ref|ZP_18610021.1| regulator of ribonuclease activity A [Escherichia coli PA4]
gi|425220740|ref|ZP_18615686.1| regulator of ribonuclease activity A [Escherichia coli PA23]
gi|425227386|ref|ZP_18621836.1| regulator of ribonuclease activity A [Escherichia coli PA49]
gi|425233542|ref|ZP_18627565.1| regulator of ribonuclease activity A [Escherichia coli PA45]
gi|425239464|ref|ZP_18633168.1| regulator of ribonuclease activity A [Escherichia coli TT12B]
gi|425245702|ref|ZP_18638992.1| regulator of ribonuclease activity A [Escherichia coli MA6]
gi|425245999|ref|ZP_18639276.1| regulator of ribonuclease activity A [Escherichia coli 5905]
gi|425257695|ref|ZP_18650173.1| regulator of ribonuclease activity A [Escherichia coli CB7326]
gi|425263950|ref|ZP_18655925.1| regulator of ribonuclease activity A [Escherichia coli EC96038]
gi|425269942|ref|ZP_18661552.1| regulator of ribonuclease activity A [Escherichia coli 5412]
gi|425275271|ref|ZP_18666647.1| regulator of ribonuclease activity A [Escherichia coli TW15901]
gi|425285826|ref|ZP_18676836.1| regulator of ribonuclease activity A [Escherichia coli TW00353]
gi|425291146|ref|ZP_18681952.1| regulator of ribonuclease activity A [Escherichia coli 3006]
gi|425297411|ref|ZP_18687518.1| regulator of ribonuclease activity A [Escherichia coli PA38]
gi|425314110|ref|ZP_18703260.1| regulator of ribonuclease activity A [Escherichia coli EC1735]
gi|425320093|ref|ZP_18708853.1| regulator of ribonuclease activity A [Escherichia coli EC1736]
gi|425326232|ref|ZP_18714541.1| regulator of ribonuclease activity A [Escherichia coli EC1737]
gi|425332542|ref|ZP_18720338.1| regulator of ribonuclease activity A [Escherichia coli EC1846]
gi|425338720|ref|ZP_18726042.1| regulator of ribonuclease activity A [Escherichia coli EC1847]
gi|425345012|ref|ZP_18731884.1| regulator of ribonuclease activity A [Escherichia coli EC1848]
gi|425350852|ref|ZP_18737294.1| regulator of ribonuclease activity A [Escherichia coli EC1849]
gi|425357124|ref|ZP_18743169.1| regulator of ribonuclease activity A [Escherichia coli EC1850]
gi|425363073|ref|ZP_18748704.1| regulator of ribonuclease activity A [Escherichia coli EC1856]
gi|425369340|ref|ZP_18754400.1| regulator of ribonuclease activity A [Escherichia coli EC1862]
gi|425375646|ref|ZP_18760268.1| regulator of ribonuclease activity A [Escherichia coli EC1864]
gi|425388532|ref|ZP_18772074.1| regulator of ribonuclease activity A [Escherichia coli EC1866]
gi|425395261|ref|ZP_18778350.1| regulator of ribonuclease activity A [Escherichia coli EC1868]
gi|425401316|ref|ZP_18784005.1| regulator of ribonuclease activity A [Escherichia coli EC1869]
gi|425413769|ref|ZP_18795514.1| regulator of ribonuclease activity A [Escherichia coli NE098]
gi|425420167|ref|ZP_18801416.1| regulator of ribonuclease activity A [Escherichia coli FRIK523]
gi|425424958|ref|ZP_18806101.1| regulator of ribonuclease activity A [Escherichia coli 0.1288]
gi|425431383|ref|ZP_18811975.1| regulator of ribonuclease activity A [Escherichia coli 0.1304]
gi|427807123|ref|ZP_18974190.1| regulator of ribonuclease activity a [Escherichia coli chi7122]
gi|427811721|ref|ZP_18978786.1| regulator of ribonuclease activity a [Escherichia coli]
gi|428949789|ref|ZP_19022044.1| regulator of ribonuclease activity A [Escherichia coli 88.1467]
gi|428955861|ref|ZP_19027634.1| regulator of ribonuclease activity A [Escherichia coli 88.1042]
gi|428961990|ref|ZP_19033246.1| regulator of ribonuclease activity A [Escherichia coli 89.0511]
gi|428968481|ref|ZP_19039168.1| regulator of ribonuclease activity A [Escherichia coli 90.0091]
gi|428974173|ref|ZP_19044467.1| regulator of ribonuclease activity A [Escherichia coli 90.0039]
gi|428980643|ref|ZP_19050432.1| regulator of ribonuclease activity A [Escherichia coli 90.2281]
gi|428986428|ref|ZP_19055800.1| regulator of ribonuclease activity A [Escherichia coli 93.0055]
gi|428992577|ref|ZP_19061547.1| regulator of ribonuclease activity A [Escherichia coli 93.0056]
gi|428998470|ref|ZP_19067044.1| regulator of ribonuclease activity A [Escherichia coli 94.0618]
gi|429004862|ref|ZP_19072904.1| regulator of ribonuclease activity A [Escherichia coli 95.0183]
gi|429010899|ref|ZP_19078278.1| regulator of ribonuclease activity A [Escherichia coli 95.1288]
gi|429017363|ref|ZP_19084222.1| regulator of ribonuclease activity A [Escherichia coli 95.0943]
gi|429023141|ref|ZP_19089639.1| regulator of ribonuclease activity A [Escherichia coli 96.0428]
gi|429029285|ref|ZP_19095239.1| regulator of ribonuclease activity A [Escherichia coli 96.0427]
gi|429041536|ref|ZP_19106607.1| regulator of ribonuclease activity A [Escherichia coli 96.0932]
gi|429047361|ref|ZP_19112056.1| regulator of ribonuclease activity A [Escherichia coli 96.0107]
gi|429052713|ref|ZP_19117268.1| regulator of ribonuclease activity A [Escherichia coli 97.0003]
gi|429058283|ref|ZP_19122517.1| regulator of ribonuclease activity A [Escherichia coli 97.1742]
gi|429063799|ref|ZP_19127748.1| regulator of ribonuclease activity A [Escherichia coli 97.0007]
gi|429070017|ref|ZP_19133436.1| regulator of ribonuclease activity A [Escherichia coli 99.0672]
gi|429081017|ref|ZP_19144140.1| regulator of ribonuclease activity A [Escherichia coli 99.0713]
gi|429721675|ref|ZP_19256588.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-9450]
gi|429773751|ref|ZP_19305763.1| RraA family protein [Escherichia coli O104:H4 str. 11-02030]
gi|429778935|ref|ZP_19310899.1| RraA family protein [Escherichia coli O104:H4 str. 11-02033-1]
gi|429782770|ref|ZP_19314693.1| RraA family protein [Escherichia coli O104:H4 str. 11-02092]
gi|429788163|ref|ZP_19320048.1| RraA family protein [Escherichia coli O104:H4 str. 11-02093]
gi|429794602|ref|ZP_19326441.1| RraA family protein [Escherichia coli O104:H4 str. 11-02281]
gi|429800562|ref|ZP_19332349.1| RraA family protein [Escherichia coli O104:H4 str. 11-02318]
gi|429804174|ref|ZP_19335929.1| RraA family protein [Escherichia coli O104:H4 str. 11-02913]
gi|429808822|ref|ZP_19340536.1| RraA family protein [Escherichia coli O104:H4 str. 11-03439]
gi|429814764|ref|ZP_19346432.1| RraA family protein [Escherichia coli O104:H4 str. 11-04080]
gi|429819724|ref|ZP_19351352.1| RraA family protein [Escherichia coli O104:H4 str. 11-03943]
gi|429829198|ref|ZP_19360175.1| regulator of ribonuclease activity A [Escherichia coli 96.0109]
gi|429906043|ref|ZP_19372017.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910177|ref|ZP_19376137.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916076|ref|ZP_19382020.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921125|ref|ZP_19387050.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-5604]
gi|429926931|ref|ZP_19392841.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930862|ref|ZP_19396761.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937404|ref|ZP_19403289.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4988]
gi|429943083|ref|ZP_19408954.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945763|ref|ZP_19411622.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-6006]
gi|429953327|ref|ZP_19419170.1| RraA family protein [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956671|ref|ZP_19422501.1| RraA family protein [Escherichia coli O104:H4 str. Ec12-0466]
gi|432355968|ref|ZP_19599227.1| RraA family protein [Escherichia coli KTE2]
gi|432360397|ref|ZP_19603607.1| RraA family protein [Escherichia coli KTE4]
gi|432365198|ref|ZP_19608350.1| RraA family protein [Escherichia coli KTE5]
gi|432367438|ref|ZP_19610549.1| RraA family protein [Escherichia coli KTE10]
gi|432374515|ref|ZP_19617544.1| RraA family protein [Escherichia coli KTE11]
gi|432379166|ref|ZP_19622146.1| RraA family protein [Escherichia coli KTE12]
gi|432383840|ref|ZP_19626763.1| RraA family protein [Escherichia coli KTE15]
gi|432384855|ref|ZP_19627762.1| RraA family protein [Escherichia coli KTE16]
gi|432394606|ref|ZP_19637421.1| RraA family protein [Escherichia coli KTE21]
gi|432395338|ref|ZP_19638134.1| RraA family protein [Escherichia coli KTE25]
gi|432404333|ref|ZP_19647074.1| RraA family protein [Escherichia coli KTE26]
gi|432409023|ref|ZP_19651723.1| RraA family protein [Escherichia coli KTE28]
gi|432414242|ref|ZP_19656892.1| RraA family protein [Escherichia coli KTE39]
gi|432419454|ref|ZP_19662042.1| RraA family protein [Escherichia coli KTE44]
gi|432424349|ref|ZP_19666883.1| RraA family protein [Escherichia coli KTE178]
gi|432428598|ref|ZP_19671075.1| RraA family protein [Escherichia coli KTE181]
gi|432434246|ref|ZP_19676664.1| RraA family protein [Escherichia coli KTE187]
gi|432438905|ref|ZP_19681279.1| RraA family protein [Escherichia coli KTE188]
gi|432443543|ref|ZP_19685865.1| RraA family protein [Escherichia coli KTE189]
gi|432448619|ref|ZP_19690913.1| RraA family protein [Escherichia coli KTE191]
gi|432452199|ref|ZP_19694452.1| RraA family protein [Escherichia coli KTE193]
gi|432459089|ref|ZP_19701260.1| RraA family protein [Escherichia coli KTE201]
gi|432463340|ref|ZP_19705469.1| RraA family protein [Escherichia coli KTE204]
gi|432468333|ref|ZP_19710407.1| RraA family protein [Escherichia coli KTE205]
gi|432473295|ref|ZP_19715329.1| RraA family protein [Escherichia coli KTE206]
gi|432478294|ref|ZP_19720277.1| RraA family protein [Escherichia coli KTE208]
gi|432483345|ref|ZP_19725291.1| RraA family protein [Escherichia coli KTE210]
gi|432487724|ref|ZP_19729629.1| RraA family protein [Escherichia coli KTE212]
gi|432493200|ref|ZP_19735027.1| RraA family protein [Escherichia coli KTE214]
gi|432502509|ref|ZP_19744256.1| RraA family protein [Escherichia coli KTE216]
gi|432506839|ref|ZP_19748554.1| RraA family protein [Escherichia coli KTE220]
gi|432516332|ref|ZP_19753545.1| RraA family protein [Escherichia coli KTE224]
gi|432520146|ref|ZP_19757323.1| RraA family protein [Escherichia coli KTE228]
gi|432526421|ref|ZP_19763530.1| RraA family protein [Escherichia coli KTE230]
gi|432528784|ref|ZP_19765854.1| RraA family protein [Escherichia coli KTE233]
gi|432531718|ref|ZP_19768739.1| RraA family protein [Escherichia coli KTE234]
gi|432540314|ref|ZP_19777203.1| RraA family protein [Escherichia coli KTE235]
gi|432545773|ref|ZP_19782594.1| RraA family protein [Escherichia coli KTE236]
gi|432551251|ref|ZP_19787998.1| RraA family protein [Escherichia coli KTE237]
gi|432556179|ref|ZP_19792892.1| RraA family protein [Escherichia coli KTE47]
gi|432561255|ref|ZP_19797905.1| RraA family protein [Escherichia coli KTE49]
gi|432566311|ref|ZP_19802864.1| RraA family protein [Escherichia coli KTE51]
gi|432571221|ref|ZP_19807723.1| RraA family protein [Escherichia coli KTE53]
gi|432576189|ref|ZP_19812655.1| RraA family protein [Escherichia coli KTE55]
gi|432578206|ref|ZP_19814650.1| RraA family protein [Escherichia coli KTE56]
gi|432585524|ref|ZP_19821912.1| RraA family protein [Escherichia coli KTE57]
gi|432590399|ref|ZP_19826747.1| RraA family protein [Escherichia coli KTE58]
gi|432595200|ref|ZP_19831507.1| RraA family protein [Escherichia coli KTE60]
gi|432598640|ref|ZP_19834914.1| RraA family protein [Escherichia coli KTE62]
gi|432604760|ref|ZP_19840985.1| RraA family protein [Escherichia coli KTE66]
gi|432613946|ref|ZP_19850101.1| RraA family protein [Escherichia coli KTE72]
gi|432619244|ref|ZP_19855340.1| RraA family protein [Escherichia coli KTE75]
gi|432624307|ref|ZP_19860318.1| RraA family protein [Escherichia coli KTE76]
gi|432629550|ref|ZP_19865512.1| RraA family protein [Escherichia coli KTE77]
gi|432633879|ref|ZP_19869794.1| RraA family protein [Escherichia coli KTE80]
gi|432634832|ref|ZP_19870727.1| RraA family protein [Escherichia coli KTE81]
gi|432643530|ref|ZP_19879349.1| RraA family protein [Escherichia coli KTE83]
gi|432648614|ref|ZP_19884397.1| RraA family protein [Escherichia coli KTE86]
gi|432653602|ref|ZP_19889337.1| RraA family protein [Escherichia coli KTE87]
gi|432658179|ref|ZP_19893874.1| RraA family protein [Escherichia coli KTE93]
gi|432663175|ref|ZP_19898801.1| RraA family protein [Escherichia coli KTE111]
gi|432663652|ref|ZP_19899260.1| RraA family protein [Escherichia coli KTE116]
gi|432673021|ref|ZP_19908536.1| RraA family protein [Escherichia coli KTE119]
gi|432677109|ref|ZP_19912547.1| RraA family protein [Escherichia coli KTE142]
gi|432682721|ref|ZP_19918071.1| RraA family protein [Escherichia coli KTE143]
gi|432687758|ref|ZP_19923043.1| RraA family protein [Escherichia coli KTE156]
gi|432689256|ref|ZP_19924519.1| RraA family protein [Escherichia coli KTE161]
gi|432696817|ref|ZP_19932006.1| RraA family protein [Escherichia coli KTE162]
gi|432701458|ref|ZP_19936600.1| RraA family protein [Escherichia coli KTE169]
gi|432706661|ref|ZP_19941752.1| RraA family protein [Escherichia coli KTE171]
gi|432708338|ref|ZP_19943412.1| RraA family protein [Escherichia coli KTE6]
gi|432715800|ref|ZP_19950823.1| RraA family protein [Escherichia coli KTE8]
gi|432725416|ref|ZP_19960327.1| RraA family protein [Escherichia coli KTE17]
gi|432730023|ref|ZP_19964894.1| RraA family protein [Escherichia coli KTE18]
gi|432734700|ref|ZP_19969519.1| RraA family protein [Escherichia coli KTE45]
gi|432734975|ref|ZP_19969787.1| RraA family protein [Escherichia coli KTE42]
gi|432743712|ref|ZP_19978424.1| RraA family protein [Escherichia coli KTE23]
gi|432747917|ref|ZP_19982577.1| RraA family protein [Escherichia coli KTE43]
gi|432752383|ref|ZP_19986959.1| RraA family protein [Escherichia coli KTE29]
gi|432756901|ref|ZP_19991443.1| RraA family protein [Escherichia coli KTE22]
gi|432761790|ref|ZP_19996270.1| RraA family protein [Escherichia coli KTE46]
gi|432762833|ref|ZP_19997293.1| RraA family protein [Escherichia coli KTE48]
gi|432768301|ref|ZP_20002690.1| RraA family protein [Escherichia coli KTE50]
gi|432772707|ref|ZP_20007016.1| RraA family protein [Escherichia coli KTE54]
gi|432781106|ref|ZP_20015320.1| RraA family protein [Escherichia coli KTE59]
gi|432781268|ref|ZP_20015476.1| RraA family protein [Escherichia coli KTE63]
gi|432789970|ref|ZP_20024095.1| RraA family protein [Escherichia coli KTE65]
gi|432799848|ref|ZP_20033848.1| RraA family protein [Escherichia coli KTE84]
gi|432808175|ref|ZP_20042086.1| RraA family protein [Escherichia coli KTE91]
gi|432811678|ref|ZP_20045532.1| RraA family protein [Escherichia coli KTE101]
gi|432817726|ref|ZP_20051475.1| RraA family protein [Escherichia coli KTE115]
gi|432818736|ref|ZP_20052456.1| RraA family protein [Escherichia coli KTE118]
gi|432824866|ref|ZP_20058528.1| RraA family protein [Escherichia coli KTE123]
gi|432829546|ref|ZP_20063159.1| RraA family protein [Escherichia coli KTE135]
gi|432836983|ref|ZP_20070491.1| RraA family protein [Escherichia coli KTE136]
gi|432847300|ref|ZP_20079720.1| RraA family protein [Escherichia coli KTE141]
gi|432855997|ref|ZP_20083621.1| RraA family protein [Escherichia coli KTE144]
gi|432866990|ref|ZP_20089141.1| RraA family protein [Escherichia coli KTE146]
gi|432871861|ref|ZP_20091855.1| RraA family protein [Escherichia coli KTE147]
gi|432878368|ref|ZP_20095747.1| RraA family protein [Escherichia coli KTE154]
gi|432882680|ref|ZP_20098402.1| RraA family protein [Escherichia coli KTE158]
gi|432891635|ref|ZP_20104260.1| RraA family protein [Escherichia coli KTE165]
gi|432901597|ref|ZP_20111616.1| RraA family protein [Escherichia coli KTE192]
gi|432907788|ref|ZP_20116148.1| RraA family protein [Escherichia coli KTE194]
gi|432915598|ref|ZP_20120853.1| RraA family protein [Escherichia coli KTE190]
gi|432923232|ref|ZP_20125927.1| RraA family protein [Escherichia coli KTE173]
gi|432929987|ref|ZP_20130863.1| RraA family protein [Escherichia coli KTE175]
gi|432931726|ref|ZP_20131705.1| RraA family protein [Escherichia coli KTE184]
gi|432940788|ref|ZP_20138662.1| RraA family protein [Escherichia coli KTE183]
gi|432943640|ref|ZP_20140456.1| RraA family protein [Escherichia coli KTE196]
gi|432951296|ref|ZP_20144926.1| RraA family protein [Escherichia coli KTE197]
gi|432964777|ref|ZP_20153802.1| RraA family protein [Escherichia coli KTE202]
gi|432965694|ref|ZP_20154615.1| RraA family protein [Escherichia coli KTE203]
gi|432969518|ref|ZP_20158425.1| RraA family protein [Escherichia coli KTE207]
gi|432976170|ref|ZP_20165000.1| RraA family protein [Escherichia coli KTE209]
gi|432983477|ref|ZP_20172226.1| RraA family protein [Escherichia coli KTE211]
gi|432987789|ref|ZP_20176498.1| RraA family protein [Escherichia coli KTE215]
gi|432988444|ref|ZP_20177121.1| RraA family protein [Escherichia coli KTE217]
gi|432993150|ref|ZP_20181779.1| RraA family protein [Escherichia coli KTE218]
gi|433002347|ref|ZP_20190861.1| RraA family protein [Escherichia coli KTE223]
gi|433002886|ref|ZP_20191392.1| RraA family protein [Escherichia coli KTE227]
gi|433010146|ref|ZP_20198555.1| RraA family protein [Escherichia coli KTE229]
gi|433016274|ref|ZP_20204595.1| RraA family protein [Escherichia coli KTE104]
gi|433021188|ref|ZP_20209261.1| RraA family protein [Escherichia coli KTE105]
gi|433025855|ref|ZP_20213818.1| RraA family protein [Escherichia coli KTE106]
gi|433030890|ref|ZP_20218731.1| RraA family protein [Escherichia coli KTE109]
gi|433035862|ref|ZP_20223546.1| RraA family protein [Escherichia coli KTE112]
gi|433040960|ref|ZP_20228543.1| RraA family protein [Escherichia coli KTE113]
gi|433045464|ref|ZP_20232934.1| RraA family protein [Escherichia coli KTE117]
gi|433050402|ref|ZP_20237717.1| RraA family protein [Escherichia coli KTE120]
gi|433055560|ref|ZP_20242709.1| RraA family protein [Escherichia coli KTE122]
gi|433060472|ref|ZP_20247499.1| RraA family protein [Escherichia coli KTE124]
gi|433065397|ref|ZP_20252296.1| RraA family protein [Escherichia coli KTE125]
gi|433070339|ref|ZP_20257097.1| RraA family protein [Escherichia coli KTE128]
gi|433075281|ref|ZP_20261911.1| RraA family protein [Escherichia coli KTE129]
gi|433080154|ref|ZP_20266667.1| RraA family protein [Escherichia coli KTE131]
gi|433084871|ref|ZP_20271313.1| RraA family protein [Escherichia coli KTE133]
gi|433089677|ref|ZP_20276030.1| RraA family protein [Escherichia coli KTE137]
gi|433094326|ref|ZP_20280572.1| RraA family protein [Escherichia coli KTE138]
gi|433098784|ref|ZP_20284946.1| RraA family protein [Escherichia coli KTE139]
gi|433103543|ref|ZP_20289608.1| RraA family protein [Escherichia coli KTE145]
gi|433108214|ref|ZP_20294169.1| RraA family protein [Escherichia coli KTE148]
gi|433113226|ref|ZP_20299070.1| RraA family protein [Escherichia coli KTE150]
gi|433117880|ref|ZP_20303655.1| RraA family protein [Escherichia coli KTE153]
gi|433122610|ref|ZP_20308261.1| RraA family protein [Escherichia coli KTE157]
gi|433127582|ref|ZP_20313118.1| RraA family protein [Escherichia coli KTE160]
gi|433132508|ref|ZP_20317926.1| RraA family protein [Escherichia coli KTE163]
gi|433137180|ref|ZP_20322501.1| RraA family protein [Escherichia coli KTE166]
gi|433141655|ref|ZP_20326888.1| RraA family protein [Escherichia coli KTE167]
gi|433146581|ref|ZP_20331708.1| RraA family protein [Escherichia coli KTE168]
gi|433151607|ref|ZP_20336599.1| RraA family protein [Escherichia coli KTE174]
gi|433156178|ref|ZP_20341098.1| RraA family protein [Escherichia coli KTE176]
gi|433161089|ref|ZP_20345900.1| RraA family protein [Escherichia coli KTE177]
gi|433165964|ref|ZP_20350685.1| RraA family protein [Escherichia coli KTE179]
gi|433170959|ref|ZP_20355571.1| RraA family protein [Escherichia coli KTE180]
gi|433175861|ref|ZP_20360361.1| RraA family protein [Escherichia coli KTE232]
gi|433180806|ref|ZP_20365174.1| RraA family protein [Escherichia coli KTE82]
gi|433185738|ref|ZP_20369967.1| RraA family protein [Escherichia coli KTE85]
gi|433190750|ref|ZP_20374833.1| RraA family protein [Escherichia coli KTE88]
gi|433195987|ref|ZP_20379950.1| RraA family protein [Escherichia coli KTE90]
gi|433200714|ref|ZP_20384591.1| RraA family protein [Escherichia coli KTE94]
gi|433210143|ref|ZP_20393801.1| RraA family protein [Escherichia coli KTE97]
gi|433214980|ref|ZP_20398549.1| RraA family protein [Escherichia coli KTE99]
gi|433324805|ref|ZP_20402045.1| ribonuclease activity regulator protein RraA [Escherichia coli J96]
gi|443615410|ref|YP_007379266.1| ribonuclease activity regulator protein RraA [Escherichia coli APEC
O78]
gi|444927683|ref|ZP_21246935.1| regulator of ribonuclease activity A [Escherichia coli 09BKT078844]
gi|444933292|ref|ZP_21252287.1| regulator of ribonuclease activity A [Escherichia coli 99.0814]
gi|444938707|ref|ZP_21257428.1| regulator of ribonuclease activity A [Escherichia coli 99.0815]
gi|444944412|ref|ZP_21262884.1| regulator of ribonuclease activity A [Escherichia coli 99.0816]
gi|444949805|ref|ZP_21268084.1| regulator of ribonuclease activity A [Escherichia coli 99.0839]
gi|444955498|ref|ZP_21273551.1| regulator of ribonuclease activity A [Escherichia coli 99.0848]
gi|444960864|ref|ZP_21278674.1| regulator of ribonuclease activity A [Escherichia coli 99.1753]
gi|444972127|ref|ZP_21289454.1| regulator of ribonuclease activity A [Escherichia coli 99.1793]
gi|444980655|ref|ZP_21297584.1| regulator of ribonuclease activity A [Escherichia coli ATCC 700728]
gi|444988165|ref|ZP_21304930.1| regulator of ribonuclease activity A [Escherichia coli PA11]
gi|444993544|ref|ZP_21310173.1| regulator of ribonuclease activity A [Escherichia coli PA19]
gi|444998722|ref|ZP_21315210.1| regulator of ribonuclease activity A [Escherichia coli PA13]
gi|445004266|ref|ZP_21320644.1| regulator of ribonuclease activity A [Escherichia coli PA2]
gi|445009688|ref|ZP_21325904.1| regulator of ribonuclease activity A [Escherichia coli PA47]
gi|445014768|ref|ZP_21330861.1| regulator of ribonuclease activity A [Escherichia coli PA48]
gi|445026097|ref|ZP_21341908.1| regulator of ribonuclease activity A [Escherichia coli 7.1982]
gi|445031503|ref|ZP_21347157.1| regulator of ribonuclease activity A [Escherichia coli 99.1781]
gi|445036974|ref|ZP_21352488.1| regulator of ribonuclease activity A [Escherichia coli 99.1762]
gi|445042605|ref|ZP_21357965.1| regulator of ribonuclease activity A [Escherichia coli PA35]
gi|445047808|ref|ZP_21363044.1| regulator of ribonuclease activity A [Escherichia coli 3.4880]
gi|445053399|ref|ZP_21368401.1| regulator of ribonuclease activity A [Escherichia coli 95.0083]
gi|445061371|ref|ZP_21373876.1| regulator of ribonuclease activity A [Escherichia coli 99.0670]
gi|450228623|ref|ZP_21897646.1| ribonuclease activity regulator protein RraA [Escherichia coli O08]
gi|450253328|ref|ZP_21902404.1| ribonuclease activity regulator protein RraA [Escherichia coli S17]
gi|452969594|ref|ZP_21967821.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. EC4009]
gi|67472399|sp|P0A8R0.1|RRAA_ECOLI RecName: Full=Regulator of ribonuclease activity A
gi|67472400|sp|P0A8R1.1|RRAA_ECOL6 RecName: Full=Regulator of ribonuclease activity A
gi|67472401|sp|P0A8R2.1|RRAA_ECO57 RecName: Full=Regulator of ribonuclease activity A
gi|67472402|sp|P0A8R3.1|RRAA_SHIFL RecName: Full=Regulator of ribonuclease activity A
gi|122421654|sp|Q1R3Y9.1|RRAA_ECOUT RecName: Full=Regulator of ribonuclease activity A
gi|123048627|sp|Q0TAD5.1|RRAA_ECOL5 RecName: Full=Regulator of ribonuclease activity A
gi|123558119|sp|Q31U61.1|RRAA_SHIBS RecName: Full=Regulator of ribonuclease activity A
gi|123615642|sp|Q3YV49.1|RRAA_SHISS RecName: Full=Regulator of ribonuclease activity A
gi|166991546|sp|A7ZUE4.1|RRAA_ECO24 RecName: Full=Regulator of ribonuclease activity A
gi|166991547|sp|A8A735.1|RRAA_ECOHS RecName: Full=Regulator of ribonuclease activity A
gi|189044036|sp|B1IVF0.1|RRAA_ECOLC RecName: Full=Regulator of ribonuclease activity A
gi|226703217|sp|B7MI61.1|RRAA_ECO45 RecName: Full=Regulator of ribonuclease activity A
gi|226703218|sp|B5YZ69.1|RRAA_ECO5E RecName: Full=Regulator of ribonuclease activity A
gi|226703219|sp|B7NU76.1|RRAA_ECO7I RecName: Full=Regulator of ribonuclease activity A
gi|226703220|sp|B7M6Y0.1|RRAA_ECO8A RecName: Full=Regulator of ribonuclease activity A
gi|226703221|sp|B1XB95.1|RRAA_ECODH RecName: Full=Regulator of ribonuclease activity A
gi|226703222|sp|B7NFM8.1|RRAA_ECOLU RecName: Full=Regulator of ribonuclease activity A
gi|226703223|sp|B6I4S2.1|RRAA_ECOSE RecName: Full=Regulator of ribonuclease activity A
gi|226703224|sp|B1LNN4.1|RRAA_ECOSM RecName: Full=Regulator of ribonuclease activity A
gi|226703242|sp|B2TWC5.1|RRAA_SHIB3 RecName: Full=Regulator of ribonuclease activity A
gi|254809475|sp|B7UNP9.1|RRAA_ECO27 RecName: Full=Regulator of ribonuclease activity A
gi|254809476|sp|B7LA26.1|RRAA_ECO55 RecName: Full=Regulator of ribonuclease activity A
gi|254809477|sp|B7MR18.1|RRAA_ECO81 RecName: Full=Regulator of ribonuclease activity A
gi|259494528|sp|C5A096.1|RRAA_ECOBW RecName: Full=Regulator of ribonuclease activity A
gi|37927847|pdb|1Q5X|A Chain A, Structure Of Of Rraa (Meng), A Protein Inhibitor Of Rna
Processing
gi|37927848|pdb|1Q5X|B Chain B, Structure Of Of Rraa (Meng), A Protein Inhibitor Of Rna
Processing
gi|37927849|pdb|1Q5X|C Chain C, Structure Of Of Rraa (Meng), A Protein Inhibitor Of Rna
Processing
gi|390136112|pdb|2YJT|A Chain A, Crystal Structure Of E. Coli Dead-Box Protein Srmb Bound
To Regulator Of Ribonuclease Activity A (Rraa)
gi|390136113|pdb|2YJT|B Chain B, Crystal Structure Of E. Coli Dead-Box Protein Srmb Bound
To Regulator Of Ribonuclease Activity A (Rraa)
gi|390136114|pdb|2YJT|C Chain C, Crystal Structure Of E. Coli Dead-Box Protein Srmb Bound
To Regulator Of Ribonuclease Activity A (Rraa)
gi|390136116|pdb|2YJV|A Chain A, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136117|pdb|2YJV|B Chain B, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136118|pdb|2YJV|C Chain C, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136119|pdb|2YJV|D Chain D, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136120|pdb|2YJV|E Chain E, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136121|pdb|2YJV|F Chain F, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136122|pdb|2YJV|G Chain G, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136123|pdb|2YJV|H Chain H, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136124|pdb|2YJV|I Chain I, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136125|pdb|2YJV|J Chain J, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136126|pdb|2YJV|K Chain K, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|390136127|pdb|2YJV|L Chain L, Crystal Structure Of E. Coli Regulator Of Ribonuclease
Activity A (Rraa) Bound To Fragment Of Dead-Box Protein
Rhlb
gi|12518832|gb|AAG59124.1|AE005623_15 menaquinone biosynthesis, unknown [Escherichia coli O157:H7 str.
EDL933]
gi|26111126|gb|AAN83309.1|AE016770_109 S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Escherichia coli CFT073]
gi|305032|gb|AAB03061.1| ORF_f161 [Escherichia coli str. K-12 substr. MG1655]
gi|1336002|gb|AAB01208.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Escherichia coli]
gi|1790364|gb|AAC76911.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli str.
K-12 substr. MG1655]
gi|13364332|dbj|BAB38279.1| 2-demethylmenaquinone 2-C-methyltransferase [Escherichia coli
O157:H7 str. Sakai]
gi|24054508|gb|AAN45440.1| 2-demethylmenaquinone 2-C-methyltransferase [Shigella flexneri 2a
str. 301]
gi|30043038|gb|AAP18760.1| 2-demethylmenaquinone 2-C-methyltransferase [Shigella flexneri 2a
str. 2457T]
gi|73857906|gb|AAZ90613.1| MenG [Shigella sonnei Ss046]
gi|81247689|gb|ABB68397.1| MenG [Shigella boydii Sb227]
gi|85676131|dbj|BAE77381.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli str.
K12 substr. W3110]
gi|91075044|gb|ABE09925.1| ribonuclease E inhibitor subunit [Escherichia coli UTI89]
gi|110345857|gb|ABG72094.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Escherichia coli 536]
gi|157069084|gb|ABV08339.1| regulator of ribonuclease activity A [Escherichia coli HS]
gi|157078062|gb|ABV17770.1| regulator of ribonuclease activity A [Escherichia coli E24377A]
gi|169756988|gb|ACA79687.1| regulator of ribonuclease activity A [Escherichia coli ATCC 8739]
gi|169891234|gb|ACB04941.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli str.
K-12 substr. DH10B]
gi|170521819|gb|ACB19997.1| regulator of ribonuclease activity A [Escherichia coli SMS-3-5]
gi|187429102|gb|ACD08376.1| regulator of ribonuclease activity A [Shigella boydii CDC 3083-94]
gi|187769212|gb|EDU33056.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4196]
gi|188016752|gb|EDU54874.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4113]
gi|188490717|gb|EDU65820.1| regulator of ribonuclease activity A [Escherichia coli 53638]
gi|189001608|gb|EDU70594.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4076]
gi|189357196|gb|EDU75615.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4401]
gi|189362693|gb|EDU81112.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4486]
gi|189367944|gb|EDU86360.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4501]
gi|189373201|gb|EDU91617.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC869]
gi|189378094|gb|EDU96510.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC508]
gi|190903505|gb|EDV63223.1| regulator of ribonuclease activity A [Escherichia coli B7A]
gi|190907044|gb|EDV66645.1| regulator of ribonuclease activity A [Escherichia coli F11]
gi|192929445|gb|EDV83053.1| regulator of ribonuclease activity A [Escherichia coli E22]
gi|192958679|gb|EDV89117.1| regulator of ribonuclease activity A [Escherichia coli E110019]
gi|194414534|gb|EDX30807.1| regulator of ribonuclease activity A [Escherichia coli B171]
gi|194418487|gb|EDX34575.1| regulator of ribonuclease activity A [Shigella dysenteriae 1012]
gi|194422723|gb|EDX38719.1| regulator of ribonuclease activity A [Escherichia coli 101-1]
gi|208729493|gb|EDZ79094.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4206]
gi|208734142|gb|EDZ82829.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4045]
gi|208741714|gb|EDZ89396.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4042]
gi|209158518|gb|ACI35951.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
EC4115]
gi|209752268|gb|ACI74441.1| 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Escherichia coli]
gi|209752270|gb|ACI74442.1| 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Escherichia coli]
gi|209752272|gb|ACI74443.1| 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Escherichia coli]
gi|209752274|gb|ACI74444.1| 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Escherichia coli]
gi|209752276|gb|ACI74445.1| 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Escherichia coli]
gi|209914668|dbj|BAG79742.1| menaquinone biosynthesis protein [Escherichia coli SE11]
gi|215267332|emb|CAS11781.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli
O127:H6 str. E2348/69]
gi|217320947|gb|EEC29371.1| regulator of ribonuclease activity A [Escherichia coli O157:H7 str.
TW14588]
gi|218354375|emb|CAV01131.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli 55989]
gi|218363260|emb|CAR00905.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli IAI1]
gi|218367765|emb|CAR05559.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli S88]
gi|218371352|emb|CAR19184.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli IAI39]
gi|218429777|emb|CAR10601.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli ED1a]
gi|218434652|emb|CAR15585.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli
UMN026]
gi|222035641|emb|CAP78386.1| Regulator of ribonuclease activity A [Escherichia coli LF82]
gi|226838626|gb|EEH70655.1| RraA family protein [Escherichia sp. 1_1_43]
gi|226902899|gb|EEH89158.1| ribonuclease activity regulator protein RraA [Escherichia sp.
3_2_53FAA]
gi|227837705|gb|EEJ48171.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Escherichia coli 83972]
gi|238863467|gb|ACR65465.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli
BW2952]
gi|242379465|emb|CAQ34280.1| ribonuclease E inhibitor protein, subunit of ribonuclease E
inhibitor protein A [Escherichia coli BL21(DE3)]
gi|253326476|gb|ACT31078.1| regulator of ribonuclease activity A [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975780|gb|ACT41451.1| ribonuclease activity regulator protein RraA [Escherichia coli B
str. REL606]
gi|253979937|gb|ACT45607.1| ribonuclease activity regulator protein RraA [Escherichia coli
BL21(DE3)]
gi|254595331|gb|ACT74692.1| ribonuclease E inhibitor protein [Escherichia coli O157:H7 str.
TW14359]
gi|257756319|dbj|BAI27821.1| ribonuclease E inhibitor protein RraA [Escherichia coli O26:H11
str. 11368]
gi|257761798|dbj|BAI33295.1| ribonuclease E inhibitor protein RraA [Escherichia coli O103:H2
str. 12009]
gi|257767004|dbj|BAI38499.1| ribonuclease E inhibitor protein RraA [Escherichia coli O111:H-
str. 11128]
gi|260451234|gb|ACX41656.1| regulator of ribonuclease activity A [Escherichia coli DH1]
gi|281180999|dbj|BAI57329.1| menaquinone biosynthesis protein [Escherichia coli SE15]
gi|281603323|gb|ADA76307.1| Regulator of ribonuclease activity A [Shigella flexneri 2002017]
gi|284924029|emb|CBG37128.1| regulator of ribonuclease activity A [Escherichia coli 042]
gi|290765217|gb|ADD59178.1| Regulator of ribonuclease activity A [Escherichia coli O55:H7 str.
CB9615]
gi|291321452|gb|EFE60891.1| hypothetical protein ECCG_04487 [Escherichia coli B088]
gi|291425466|gb|EFE98505.1| ribonuclease activity A regulator protein [Escherichia coli
FVEC1412]
gi|291430954|gb|EFF03950.1| hypothetical protein ECDG_04504 [Escherichia coli B185]
gi|291468117|gb|EFF10615.1| hypothetical protein ECEG_04257 [Escherichia coli B354]
gi|294492210|gb|ADE90966.1| regulator of ribonuclease activity A [Escherichia coli IHE3034]
gi|298276331|gb|EFI17851.1| ribonuclease activity A [Escherichia coli FVEC1302]
gi|299880562|gb|EFI88773.1| regulator of ribonuclease activity A [Escherichia coli MS 196-1]
gi|300299524|gb|EFJ55909.1| regulator of ribonuclease activity A [Escherichia coli MS 185-1]
gi|300306414|gb|EFJ60934.1| regulator of ribonuclease activity A [Escherichia coli MS 200-1]
gi|300318369|gb|EFJ68153.1| regulator of ribonuclease activity A [Escherichia coli MS 175-1]
gi|300356535|gb|EFJ72405.1| regulator of ribonuclease activity A [Escherichia coli MS 198-1]
gi|300397358|gb|EFJ80896.1| regulator of ribonuclease activity A [Escherichia coli MS 69-1]
gi|300401938|gb|EFJ85476.1| regulator of ribonuclease activity A [Escherichia coli MS 84-1]
gi|300410193|gb|EFJ93731.1| regulator of ribonuclease activity A [Escherichia coli MS 45-1]
gi|300413761|gb|EFJ97071.1| regulator of ribonuclease activity A [Escherichia coli MS 115-1]
gi|300421673|gb|EFK04984.1| regulator of ribonuclease activity A [Escherichia coli MS 182-1]
gi|300452192|gb|EFK15812.1| regulator of ribonuclease activity A [Escherichia coli MS 116-1]
gi|300456657|gb|EFK20150.1| regulator of ribonuclease activity A [Escherichia coli MS 21-1]
gi|300460593|gb|EFK24086.1| regulator of ribonuclease activity A [Escherichia coli MS 187-1]
gi|300522432|gb|EFK43501.1| regulator of ribonuclease activity A [Escherichia coli MS 119-7]
gi|300527541|gb|EFK48603.1| regulator of ribonuclease activity A [Escherichia coli MS 107-1]
gi|300841361|gb|EFK69121.1| regulator of ribonuclease activity A [Escherichia coli MS 124-1]
gi|300845251|gb|EFK73011.1| regulator of ribonuclease activity A [Escherichia coli MS 78-1]
gi|301076547|gb|EFK91353.1| regulator of ribonuclease activity A [Escherichia coli MS 146-1]
gi|305852805|gb|EFM53252.1| ribonuclease activity regulator protein RraA [Escherichia coli
NC101]
gi|306905423|gb|EFN35959.1| regulator of ribonuclease activity A [Escherichia coli W]
gi|307556072|gb|ADN48847.1| regulator of ribonuclease activity A [Escherichia coli ABU 83972]
gi|307629004|gb|ADN73308.1| ribonuclease activity regulator protein RraA [Escherichia coli
UM146]
gi|308119798|gb|EFO57060.1| regulator of ribonuclease activity A [Escherichia coli MS 145-7]
gi|309704354|emb|CBJ03703.1| regulator of ribonuclease activity A [Escherichia coli ETEC H10407]
gi|310334160|gb|EFQ00365.1| regulator of ribonuclease activity A [Escherichia coli 1827-70]
gi|312948504|gb|ADR29331.1| ribonuclease activity regulator protein RraA [Escherichia coli
O83:H1 str. NRG 857C]
gi|313648816|gb|EFS13255.1| regulator of ribonuclease activity A [Shigella flexneri 2a str.
2457T]
gi|315063260|gb|ADT77587.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli W]
gi|315138495|dbj|BAJ45654.1| regulator of ribonuclease activity A [Escherichia coli DH1]
gi|315254302|gb|EFU34270.1| regulator of ribonuclease activity A [Escherichia coli MS 85-1]
gi|315289640|gb|EFU49033.1| regulator of ribonuclease activity A [Escherichia coli MS 110-3]
gi|315292701|gb|EFU52053.1| regulator of ribonuclease activity A [Escherichia coli MS 153-1]
gi|315298418|gb|EFU57673.1| regulator of ribonuclease activity A [Escherichia coli MS 16-3]
gi|315617724|gb|EFU98329.1| regulator of ribonuclease activity A [Escherichia coli 3431]
gi|320190971|gb|EFW65621.1| Ribonuclease E inhibitor RraA [Escherichia coli O157:H7 str.
EC1212]
gi|320196807|gb|EFW71429.1| Ribonuclease E inhibitor RraA [Escherichia coli WV_060327]
gi|320198864|gb|EFW73462.1| Ribonuclease E inhibitor RraA [Escherichia coli EC4100B]
gi|320639181|gb|EFX08812.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. G5101]
gi|320644569|gb|EFX13626.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H- str. 493-89]
gi|320649892|gb|EFX18404.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H- str. H 2687]
gi|320655293|gb|EFX23239.1| ribonuclease activity regulator protein RraA [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320660920|gb|EFX28366.1| ribonuclease activity regulator protein RraA [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665985|gb|EFX33008.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H7 str. LSU-61]
gi|323153994|gb|EFZ40203.1| regulator of ribonuclease activity A [Escherichia coli EPECa14]
gi|323161169|gb|EFZ47086.1| regulator of ribonuclease activity A [Escherichia coli E128010]
gi|323167398|gb|EFZ53106.1| regulator of ribonuclease activity A [Shigella sonnei 53G]
gi|323174333|gb|EFZ59959.1| regulator of ribonuclease activity A [Escherichia coli LT-68]
gi|323177950|gb|EFZ63534.1| regulator of ribonuclease activity A [Escherichia coli OK1180]
gi|323182342|gb|EFZ67751.1| regulator of ribonuclease activity A [Escherichia coli OK1357]
gi|323380675|gb|ADX52943.1| regulator of ribonuclease activity A [Escherichia coli KO11FL]
gi|323934419|gb|EGB30832.1| RraA family protein [Escherichia coli E1520]
gi|323939011|gb|EGB35229.1| RraA family protein [Escherichia coli E482]
gi|323943667|gb|EGB39773.1| RraA family protein [Escherichia coli H120]
gi|323949419|gb|EGB45308.1| RraA family protein [Escherichia coli H252]
gi|323954300|gb|EGB50085.1| RraA family protein [Escherichia coli H263]
gi|323959302|gb|EGB54963.1| RraA family protein [Escherichia coli H489]
gi|323964282|gb|EGB59765.1| RraA family protein [Escherichia coli M863]
gi|323969681|gb|EGB64965.1| RraA family protein [Escherichia coli TA007]
gi|323974338|gb|EGB69467.1| RraA family protein [Escherichia coli TW10509]
gi|324006725|gb|EGB75944.1| regulator of ribonuclease activity A [Escherichia coli MS 57-2]
gi|324012496|gb|EGB81715.1| regulator of ribonuclease activity A [Escherichia coli MS 60-1]
gi|324020558|gb|EGB89777.1| regulator of ribonuclease activity A [Escherichia coli MS 117-3]
gi|324111450|gb|EGC05431.1| RraA family protein [Escherichia fergusonii B253]
gi|324115669|gb|EGC09605.1| RraA family protein [Escherichia coli E1167]
gi|325499333|gb|EGC97192.1| ribonuclease activity regulator protein RraA [Escherichia
fergusonii ECD227]
gi|326338058|gb|EGD61888.1| Ribonuclease E inhibitor RraA [Escherichia coli O157:H7 str. 1044]
gi|326342647|gb|EGD66420.1| Ribonuclease E inhibitor RraA [Escherichia coli O157:H7 str. 1125]
gi|330908250|gb|EGH36769.1| ribonuclease E inhibitor RraA [Escherichia coli AA86]
gi|331036129|gb|EGI08365.1| regulator of ribonuclease activity A [Escherichia coli H736]
gi|331041416|gb|EGI13566.1| regulator of ribonuclease activity A [Escherichia coli M605]
gi|331046728|gb|EGI18813.1| regulator of ribonuclease activity A [Escherichia coli M718]
gi|331052433|gb|EGI24470.1| regulator of ribonuclease activity A [Escherichia coli TA206]
gi|331057269|gb|EGI29259.1| regulator of ribonuclease activity A [Escherichia coli TA143]
gi|331062037|gb|EGI33960.1| regulator of ribonuclease activity A [Escherichia coli TA271]
gi|331067484|gb|EGI38889.1| regulator of ribonuclease activity A [Escherichia coli TA280]
gi|331072372|gb|EGI43705.1| regulator of ribonuclease activity A [Escherichia coli H591]
gi|332084170|gb|EGI89375.1| regulator of ribonuclease activity A [Shigella boydii 5216-82]
gi|332085159|gb|EGI90337.1| regulator of ribonuclease activity A [Shigella dysenteriae 155-74]
gi|332088273|gb|EGI93393.1| regulator of ribonuclease activity A [Shigella boydii 3594-74]
gi|332105167|gb|EGJ08513.1| ribonuclease E (RNase E) inhibitor protein [Shigella sp. D9]
gi|332345925|gb|AEE59259.1| regulator of ribonuclease activity RraA [Escherichia coli UMNK88]
gi|340731940|gb|EGR61079.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 01-09591]
gi|340737876|gb|EGR72130.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. LB226692]
gi|341921124|gb|EGT70727.1| hypothetical protein C22711_4760 [Escherichia coli O104:H4 str.
C227-11]
gi|342363300|gb|EGU27409.1| ribonuclease activity regulator protein RraA [Escherichia coli
XH140A]
gi|342926694|gb|EGU95416.1| regulator of ribonuclease activity A [Escherichia coli MS 79-10]
gi|344193498|gb|EGV47578.1| ribonuclease activity regulator protein RraA [Escherichia coli
XH001]
gi|345330744|gb|EGW63209.1| regulator of ribonuclease activity A [Escherichia coli
STEC_C165-02]
gi|345346945|gb|EGW79262.1| regulator of ribonuclease activity A [Escherichia coli STEC_94C]
gi|345347925|gb|EGW80224.1| regulator of ribonuclease activity A [Escherichia coli 3030-1]
gi|345352857|gb|EGW85096.1| regulator of ribonuclease activity A [Escherichia coli
STEC_DG131-3]
gi|345357492|gb|EGW89687.1| regulator of ribonuclease activity A [Escherichia coli STEC_EH250]
gi|345368938|gb|EGX00928.1| regulator of ribonuclease activity A [Escherichia coli G58-1]
gi|345371417|gb|EGX03387.1| regulator of ribonuclease activity A [Escherichia coli STEC_H.1.8]
gi|345384711|gb|EGX14572.1| regulator of ribonuclease activity A [Escherichia coli STEC_S1191]
gi|345389470|gb|EGX19275.1| regulator of ribonuclease activity A [Escherichia coli TX1999]
gi|349740577|gb|AEQ15283.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli O7:K1
str. CE10]
gi|354856944|gb|EHF17401.1| RraA family protein [Escherichia coli O104:H4 str. C236-11]
gi|354861261|gb|EHF21701.1| RraA family protein [Escherichia coli O104:H4 str. C227-11]
gi|354861553|gb|EHF21992.1| RraA family protein [Escherichia coli O104:H4 str. 04-8351]
gi|354869967|gb|EHF30373.1| RraA family protein [Escherichia coli O104:H4 str. 09-7901]
gi|354875896|gb|EHF36259.1| RraA family protein [Escherichia coli O104:H4 str. 11-3677]
gi|354885175|gb|EHF45483.1| RraA family protein [Escherichia coli O104:H4 str. 11-4404]
gi|354888484|gb|EHF48741.1| RraA family protein [Escherichia coli O104:H4 str. 11-4522]
gi|354892002|gb|EHF52218.1| RraA family protein [Escherichia coli O104:H4 str. 11-4623]
gi|354904035|gb|EHF64131.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354907562|gb|EHF67622.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354909569|gb|EHF69600.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354911846|gb|EHF71849.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354920035|gb|EHF79972.1| RraA family protein [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355422795|gb|AER86992.1| ribonuclease activity regulator protein RraA [Escherichia coli str.
'clone D i2']
gi|355427715|gb|AER91911.1| ribonuclease activity regulator protein RraA [Escherichia coli str.
'clone D i14']
gi|359334052|dbj|BAL40499.1| ribonuclease E (RNase E) inhibitor protein [Escherichia coli str.
K-12 substr. MDS42]
gi|371591639|gb|EHN80586.1| RraA family protein [Escherichia coli H494]
gi|371594237|gb|EHN83106.1| RraA family protein [Escherichia coli TA124]
gi|371603691|gb|EHN92338.1| regulator-ribonuclease activity A [Escherichia coli H397]
gi|371604143|gb|EHN92775.1| regulator-ribonuclease activity A [Escherichia coli B093]
gi|371612462|gb|EHO00973.1| regulator-ribonuclease activity A [Escherichia coli E101]
gi|373244117|gb|EHP63607.1| RraA family protein [Escherichia coli 4_1_47FAA]
gi|374361374|gb|AEZ43081.1| ribonuclease activity regulator protein RraA [Escherichia coli
O55:H7 str. RM12579]
gi|375321327|gb|EHS67175.1| ribonuclease activity regulator protein RraA [Escherichia coli
O157:H43 str. T22]
gi|377838833|gb|EHU03942.1| regulator of ribonuclease activity A [Escherichia coli DEC1A]
gi|377841583|gb|EHU06648.1| regulator of ribonuclease activity A [Escherichia coli DEC1B]
gi|377905378|gb|EHU69649.1| regulator of ribonuclease activity A [Escherichia coli DEC3D]
gi|377916803|gb|EHU80877.1| regulator of ribonuclease activity A [Escherichia coli DEC3F]
gi|377922648|gb|EHU86629.1| regulator of ribonuclease activity A [Escherichia coli DEC4A]
gi|377937182|gb|EHV00969.1| regulator of ribonuclease activity A [Escherichia coli DEC4D]
gi|377937265|gb|EHV01048.1| regulator of ribonuclease activity A [Escherichia coli DEC4C]
gi|377953662|gb|EHV17231.1| regulator of ribonuclease activity A [Escherichia coli DEC4F]
gi|377956984|gb|EHV20523.1| regulator of ribonuclease activity A [Escherichia coli DEC5A]
gi|377961508|gb|EHV24976.1| regulator of ribonuclease activity A [Escherichia coli DEC5B]
gi|377969099|gb|EHV32482.1| regulator of ribonuclease activity A [Escherichia coli DEC5C]
gi|377969919|gb|EHV33293.1| regulator of ribonuclease activity A [Escherichia coli DEC5D]
gi|377979845|gb|EHV43117.1| regulator of ribonuclease activity A [Escherichia coli DEC5E]
gi|377988164|gb|EHV51343.1| regulator of ribonuclease activity A [Escherichia coli DEC6B]
gi|377988891|gb|EHV52062.1| regulator of ribonuclease activity A [Escherichia coli DEC6A]
gi|377991895|gb|EHV55044.1| regulator of ribonuclease activity A [Escherichia coli DEC6C]
gi|378003517|gb|EHV66559.1| regulator of ribonuclease activity A [Escherichia coli DEC6D]
gi|378042680|gb|EHW05127.1| regulator of ribonuclease activity A [Escherichia coli DEC8A]
gi|378047938|gb|EHW10295.1| regulator of ribonuclease activity A [Escherichia coli DEC8C]
gi|378057652|gb|EHW19878.1| regulator of ribonuclease activity A [Escherichia coli DEC8D]
gi|378060574|gb|EHW22764.1| regulator of ribonuclease activity A [Escherichia coli DEC8E]
gi|378086426|gb|EHW48304.1| regulator of ribonuclease activity A [Escherichia coli DEC9D]
gi|378097131|gb|EHW58890.1| regulator of ribonuclease activity A [Escherichia coli DEC10A]
gi|378102530|gb|EHW64206.1| regulator of ribonuclease activity A [Escherichia coli DEC10B]
gi|378113146|gb|EHW74717.1| regulator of ribonuclease activity A [Escherichia coli DEC10D]
gi|378124228|gb|EHW85637.1| regulator of ribonuclease activity A [Escherichia coli DEC10E]
gi|378124447|gb|EHW85855.1| regulator of ribonuclease activity A [Escherichia coli DEC11A]
gi|378137966|gb|EHW99228.1| regulator of ribonuclease activity A [Escherichia coli DEC11B]
gi|378143691|gb|EHX04877.1| regulator of ribonuclease activity A [Escherichia coli DEC11D]
gi|378154532|gb|EHX15606.1| regulator of ribonuclease activity A [Escherichia coli DEC11E]
gi|378161175|gb|EHX22160.1| regulator of ribonuclease activity A [Escherichia coli DEC12B]
gi|378164459|gb|EHX25404.1| regulator of ribonuclease activity A [Escherichia coli DEC12A]
gi|378165134|gb|EHX26074.1| regulator of ribonuclease activity A [Escherichia coli DEC12C]
gi|378181836|gb|EHX42496.1| regulator of ribonuclease activity A [Escherichia coli DEC13A]
gi|378182016|gb|EHX42672.1| regulator of ribonuclease activity A [Escherichia coli DEC12E]
gi|378195416|gb|EHX55915.1| regulator of ribonuclease activity A [Escherichia coli DEC13C]
gi|378195560|gb|EHX56058.1| regulator of ribonuclease activity A [Escherichia coli DEC13B]
gi|378197989|gb|EHX58464.1| regulator of ribonuclease activity A [Escherichia coli DEC13D]
gi|378209127|gb|EHX69502.1| regulator of ribonuclease activity A [Escherichia coli DEC13E]
gi|378214213|gb|EHX74521.1| regulator of ribonuclease activity A [Escherichia coli DEC14B]
gi|378223674|gb|EHX83890.1| regulator of ribonuclease activity A [Escherichia coli DEC14C]
gi|378234509|gb|EHX94586.1| regulator of ribonuclease activity A [Escherichia coli DEC15A]
gi|378239871|gb|EHX99850.1| regulator of ribonuclease activity A [Escherichia coli DEC15B]
gi|378242332|gb|EHY02288.1| regulator of ribonuclease activity A [Escherichia coli DEC15C]
gi|378254928|gb|EHY14788.1| regulator of ribonuclease activity A [Escherichia coli DEC15E]
gi|380346034|gb|EIA34336.1| ribonuclease activity regulator protein RraA [Escherichia coli
SCI-07]
gi|383105348|gb|AFG42857.1| Regulator of ribonuclease activity A [Escherichia coli P12b]
gi|383390571|gb|AFH15529.1| ribonuclease activity regulator protein RraA [Escherichia coli
KO11FL]
gi|383407574|gb|AFH13817.1| ribonuclease activity regulator protein RraA [Escherichia coli W]
gi|383476906|gb|EID68836.1| ribonuclease activity regulator protein RraA [Escherichia coli W26]
gi|385155159|gb|EIF17164.1| ribonuclease activity regulator protein RraA [Escherichia coli
O32:H37 str. P4]
gi|385537402|gb|EIF84275.1| RraA family protein [Escherichia coli M919]
gi|385708193|gb|EIG45208.1| RraA family protein [Escherichia coli H730]
gi|385709153|gb|EIG46155.1| RraA family protein [Escherichia coli B799]
gi|386120460|gb|EIG69086.1| RraA family protein [Escherichia sp. 4_1_40B]
gi|386148056|gb|EIG94495.1| regulator of ribonuclease activity A [Escherichia coli 97.0246]
gi|386152129|gb|EIH03418.1| regulator of ribonuclease activity A [Escherichia coli 5.0588]
gi|386155261|gb|EIH11616.1| regulator of ribonuclease activity A [Escherichia coli 97.0259]
gi|386161201|gb|EIH23004.1| regulator of ribonuclease activity A [Escherichia coli 1.2264]
gi|386167182|gb|EIH33702.1| regulator of ribonuclease activity A [Escherichia coli 96.0497]
gi|386174356|gb|EIH46356.1| regulator of ribonuclease activity A [Escherichia coli 99.0741]
gi|386178857|gb|EIH56336.1| regulator of ribonuclease activity A [Escherichia coli 3.2608]
gi|386182958|gb|EIH65714.1| regulator of ribonuclease activity A [Escherichia coli 93.0624]
gi|386186945|gb|EIH75768.1| regulator of ribonuclease activity A [Escherichia coli 4.0522]
gi|386196743|gb|EIH90956.1| regulator of ribonuclease activity A [Escherichia coli JB1-95]
gi|386213164|gb|EII23596.1| regulator of ribonuclease activity A [Escherichia coli 9.0111]
gi|386219833|gb|EII36297.1| regulator of ribonuclease activity A [Escherichia coli 4.0967]
gi|386236729|gb|EII68703.1| regulator of ribonuclease activity A [Escherichia coli 2.4168]
gi|386239837|gb|EII76763.1| regulator of ribonuclease activity A [Escherichia coli 3.2303]
gi|386252133|gb|EIJ01825.1| regulator of ribonuclease activity A [Escherichia coli B41]
gi|386259888|gb|EIJ15362.1| regulator of ribonuclease activity A [Escherichia coli 900105
(10e)]
gi|386798612|gb|AFJ31646.1| ribonuclease activity regulator protein RraA [Escherichia coli
Xuzhou21]
gi|388334590|gb|EIL01174.1| ribonuclease activity regulator protein RraA [Escherichia coli
O103:H25 str. CVM9340]
gi|388338161|gb|EIL04637.1| ribonuclease activity regulator protein RraA [Escherichia coli
O103:H2 str. CVM9450]
gi|388346346|gb|EIL12066.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9534]
gi|388356366|gb|EIL21115.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9574]
gi|388359570|gb|EIL23859.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9570]
gi|388360214|gb|EIL24452.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9545]
gi|388374513|gb|EIL37649.1| ribonuclease activity A regulator [Escherichia coli O26:H11 str.
CVM10026]
gi|388374741|gb|EIL37853.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM9942]
gi|388383126|gb|EIL44913.1| ribonuclease activity regulator protein RraA [Escherichia coli KD2]
gi|388383974|gb|EIL45717.1| ribonuclease activity regulator protein RraA [Escherichia coli
541-15]
gi|388392379|gb|EIL53799.1| ribonuclease activity regulator protein RraA [Escherichia coli KD1]
gi|388406785|gb|EIL67170.1| ribonuclease activity regulator protein RraA [Escherichia coli
541-1]
gi|388411058|gb|EIL71251.1| ribonuclease activity regulator protein RraA [Escherichia coli 75]
gi|388419421|gb|EIL79162.1| ribonuclease activity regulator protein RraA [Escherichia coli
HM605]
gi|388420209|gb|EIL79908.1| ribonuclease activity regulator protein RraA [Escherichia coli
576-1]
gi|388422515|gb|EIL82092.1| ribonuclease activity regulator protein RraA [Escherichia coli
CUMT8]
gi|390637475|gb|EIN17024.1| regulator of ribonuclease activity A [Escherichia coli FDA505]
gi|390655669|gb|EIN33588.1| regulator of ribonuclease activity A [Escherichia coli FRIK1985]
gi|390656579|gb|EIN34445.1| regulator of ribonuclease activity A [Escherichia coli 93-001]
gi|390659093|gb|EIN36862.1| regulator of ribonuclease activity A [Escherichia coli FRIK1990]
gi|390673917|gb|EIN50132.1| regulator of ribonuclease activity A [Escherichia coli PA3]
gi|390677248|gb|EIN53311.1| regulator of ribonuclease activity A [Escherichia coli PA5]
gi|390680631|gb|EIN56463.1| regulator of ribonuclease activity A [Escherichia coli PA9]
gi|390691798|gb|EIN66524.1| regulator of ribonuclease activity A [Escherichia coli PA10]
gi|390696130|gb|EIN70628.1| regulator of ribonuclease activity A [Escherichia coli PA14]
gi|390697280|gb|EIN71704.1| regulator of ribonuclease activity A [Escherichia coli PA15]
gi|390711069|gb|EIN84058.1| regulator of ribonuclease activity A [Escherichia coli PA22]
gi|390717251|gb|EIN90038.1| regulator of ribonuclease activity A [Escherichia coli PA24]
gi|390717956|gb|EIN90721.1| regulator of ribonuclease activity A [Escherichia coli PA25]
gi|390724122|gb|EIN96691.1| regulator of ribonuclease activity A [Escherichia coli PA28]
gi|390737399|gb|EIO08698.1| regulator of ribonuclease activity A [Escherichia coli PA32]
gi|390741081|gb|EIO12180.1| regulator of ribonuclease activity A [Escherichia coli PA33]
gi|390755500|gb|EIO25040.1| regulator of ribonuclease activity A [Escherichia coli PA40]
gi|390758018|gb|EIO27487.1| regulator of ribonuclease activity A [Escherichia coli PA39]
gi|390761747|gb|EIO31024.1| regulator of ribonuclease activity A [Escherichia coli PA41]
gi|390764712|gb|EIO33911.1| regulator of ribonuclease activity A [Escherichia coli PA42]
gi|390783329|gb|EIO50936.1| regulator of ribonuclease activity A [Escherichia coli TW06591]
gi|390785417|gb|EIO52960.1| regulator of ribonuclease activity A [Escherichia coli TW07945]
gi|390786718|gb|EIO54224.1| regulator of ribonuclease activity A [Escherichia coli TW10246]
gi|390793006|gb|EIO60353.1| regulator of ribonuclease activity A [Escherichia coli TW11039]
gi|390799861|gb|EIO66984.1| regulator of ribonuclease activity A [Escherichia coli TW09098]
gi|390804336|gb|EIO71312.1| regulator of ribonuclease activity A [Escherichia coli TW09109]
gi|390813463|gb|EIO80079.1| regulator of ribonuclease activity A [Escherichia coli TW10119]
gi|390821442|gb|EIO87631.1| regulator of ribonuclease activity A [Escherichia coli TW09195]
gi|390822343|gb|EIO88470.1| regulator of ribonuclease activity A [Escherichia coli EC4203]
gi|390827364|gb|EIO93131.1| regulator of ribonuclease activity A [Escherichia coli EC4196]
gi|390840521|gb|EIP04545.1| regulator of ribonuclease activity A [Escherichia coli TW14313]
gi|390842630|gb|EIP06471.1| regulator of ribonuclease activity A [Escherichia coli TW14301]
gi|390847659|gb|EIP11189.1| regulator of ribonuclease activity A [Escherichia coli EC4421]
gi|390858169|gb|EIP20582.1| regulator of ribonuclease activity A [Escherichia coli EC4422]
gi|390862452|gb|EIP24640.1| regulator of ribonuclease activity A [Escherichia coli EC4013]
gi|390866455|gb|EIP28415.1| regulator of ribonuclease activity A [Escherichia coli EC4402]
gi|390880079|gb|EIP40786.1| regulator of ribonuclease activity A [Escherichia coli EC4436]
gi|390890002|gb|EIP49692.1| regulator of ribonuclease activity A [Escherichia coli EC4437]
gi|390891394|gb|EIP51029.1| regulator of ribonuclease activity A [Escherichia coli EC4448]
gi|390897798|gb|EIP57105.1| regulator of ribonuclease activity A [Escherichia coli EC1738]
gi|390905686|gb|EIP64616.1| regulator of ribonuclease activity A [Escherichia coli EC1734]
gi|390915330|gb|EIP73846.1| regulator of ribonuclease activity A [Escherichia coli EC1845]
gi|390915776|gb|EIP74279.1| regulator of ribonuclease activity A [Escherichia coli EC1863]
gi|391264883|gb|EIQ23867.1| regulator of ribonuclease activity A [Shigella boydii 965-58]
gi|391277234|gb|EIQ35985.1| regulator of ribonuclease activity A [Shigella sonnei 3226-85]
gi|391280429|gb|EIQ39101.1| regulator of ribonuclease activity A [Shigella sonnei 3233-85]
gi|391291428|gb|EIQ49825.1| regulator of ribonuclease activity A [Shigella sonnei 4822-66]
gi|391305211|gb|EIQ63003.1| regulator of ribonuclease activity A [Shigella flexneri 1235-66]
gi|391309288|gb|EIQ66963.1| regulator of ribonuclease activity A [Escherichia coli EPEC
C342-62]
gi|394386441|gb|EJE63943.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM10224]
gi|394389416|gb|EJE66562.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9602]
gi|394390947|gb|EJE67873.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CVM9634]
gi|394406175|gb|EJE81223.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM10021]
gi|394409594|gb|EJE84097.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9553]
gi|394415429|gb|EJE89292.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CVM9455]
gi|394423360|gb|EJE96612.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM9952]
gi|394425004|gb|EJE98043.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CVM10030]
gi|397782907|gb|EJK93771.1| regulator of ribonuclease activity A [Escherichia coli STEC_O31]
gi|397894562|gb|EJL11003.1| regulator of ribonuclease activity A [Shigella sonnei str. Moseley]
gi|406780048|gb|AFS59472.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407056637|gb|AFS76688.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407062970|gb|AFS84017.1| ribonuclease activity regulator protein RraA [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408063591|gb|EKG98082.1| regulator of ribonuclease activity A [Escherichia coli FRIK920]
gi|408065014|gb|EKG99494.1| regulator of ribonuclease activity A [Escherichia coli PA34]
gi|408074485|gb|EKH08767.1| regulator of ribonuclease activity A [Escherichia coli PA7]
gi|408075156|gb|EKH09399.1| regulator of ribonuclease activity A [Escherichia coli FDA506]
gi|408080149|gb|EKH14239.1| regulator of ribonuclease activity A [Escherichia coli FDA507]
gi|408094497|gb|EKH27519.1| regulator of ribonuclease activity A [Escherichia coli FRIK1999]
gi|408100686|gb|EKH33175.1| regulator of ribonuclease activity A [Escherichia coli FRIK1997]
gi|408112347|gb|EKH44006.1| regulator of ribonuclease activity A [Escherichia coli NE037]
gi|408118597|gb|EKH49725.1| regulator of ribonuclease activity A [Escherichia coli FRIK2001]
gi|408124796|gb|EKH55443.1| regulator of ribonuclease activity A [Escherichia coli PA4]
gi|408134714|gb|EKH64534.1| regulator of ribonuclease activity A [Escherichia coli PA23]
gi|408136677|gb|EKH66412.1| regulator of ribonuclease activity A [Escherichia coli PA49]
gi|408143677|gb|EKH72956.1| regulator of ribonuclease activity A [Escherichia coli PA45]
gi|408152058|gb|EKH80512.1| regulator of ribonuclease activity A [Escherichia coli TT12B]
gi|408157121|gb|EKH85294.1| regulator of ribonuclease activity A [Escherichia coli MA6]
gi|408170292|gb|EKH97510.1| regulator of ribonuclease activity A [Escherichia coli CB7326]
gi|408177226|gb|EKI04045.1| regulator of ribonuclease activity A [Escherichia coli EC96038]
gi|408177494|gb|EKI04286.1| regulator of ribonuclease activity A [Escherichia coli 5905]
gi|408180174|gb|EKI06805.1| regulator of ribonuclease activity A [Escherichia coli 5412]
gi|408189391|gb|EKI15122.1| regulator of ribonuclease activity A [Escherichia coli TW15901]
gi|408197455|gb|EKI22715.1| regulator of ribonuclease activity A [Escherichia coli TW00353]
gi|408208716|gb|EKI33348.1| regulator of ribonuclease activity A [Escherichia coli 3006]
gi|408210555|gb|EKI35118.1| regulator of ribonuclease activity A [Escherichia coli PA38]
gi|408223376|gb|EKI47149.1| regulator of ribonuclease activity A [Escherichia coli EC1735]
gi|408234851|gb|EKI57849.1| regulator of ribonuclease activity A [Escherichia coli EC1736]
gi|408237482|gb|EKI60338.1| regulator of ribonuclease activity A [Escherichia coli EC1737]
gi|408242831|gb|EKI65385.1| regulator of ribonuclease activity A [Escherichia coli EC1846]
gi|408251774|gb|EKI73494.1| regulator of ribonuclease activity A [Escherichia coli EC1847]
gi|408256059|gb|EKI77467.1| regulator of ribonuclease activity A [Escherichia coli EC1848]
gi|408262754|gb|EKI83673.1| regulator of ribonuclease activity A [Escherichia coli EC1849]
gi|408270951|gb|EKI91105.1| regulator of ribonuclease activity A [Escherichia coli EC1850]
gi|408274143|gb|EKI94171.1| regulator of ribonuclease activity A [Escherichia coli EC1856]
gi|408282055|gb|EKJ01408.1| regulator of ribonuclease activity A [Escherichia coli EC1862]
gi|408288363|gb|EKJ07192.1| regulator of ribonuclease activity A [Escherichia coli EC1864]
gi|408303052|gb|EKJ20520.1| regulator of ribonuclease activity A [Escherichia coli EC1868]
gi|408304443|gb|EKJ21871.1| regulator of ribonuclease activity A [Escherichia coli EC1866]
gi|408315766|gb|EKJ32070.1| regulator of ribonuclease activity A [Escherichia coli EC1869]
gi|408322932|gb|EKJ38905.1| regulator of ribonuclease activity A [Escherichia coli NE098]
gi|408333694|gb|EKJ48640.1| regulator of ribonuclease activity A [Escherichia coli FRIK523]
gi|408340337|gb|EKJ54836.1| regulator of ribonuclease activity A [Escherichia coli 0.1288]
gi|408341728|gb|EKJ56171.1| regulator of ribonuclease activity A [Escherichia coli 0.1304]
gi|408457219|gb|EKJ81018.1| ribonuclease activity regulator protein RraA [Escherichia coli
AD30]
gi|408544714|gb|EKK22163.1| regulator of ribonuclease activity A [Escherichia coli 5.2239]
gi|408545141|gb|EKK22581.1| regulator of ribonuclease activity A [Escherichia coli 3.4870]
gi|408545723|gb|EKK23149.1| regulator of ribonuclease activity A [Escherichia coli 6.0172]
gi|408562836|gb|EKK38988.1| regulator of ribonuclease activity A [Escherichia coli 8.0566]
gi|408563360|gb|EKK39497.1| regulator of ribonuclease activity A [Escherichia coli 8.0586]
gi|408563938|gb|EKK40059.1| regulator of ribonuclease activity A [Escherichia coli 8.0569]
gi|408575617|gb|EKK51275.1| regulator of ribonuclease activity A [Escherichia coli 10.0833]
gi|408578355|gb|EKK53874.1| regulator of ribonuclease activity A [Escherichia coli 8.2524]
gi|408588270|gb|EKK62858.1| regulator of ribonuclease activity A [Escherichia coli 10.0869]
gi|408593216|gb|EKK67544.1| regulator of ribonuclease activity A [Escherichia coli 88.0221]
gi|408598865|gb|EKK72806.1| regulator of ribonuclease activity A [Escherichia coli 8.0416]
gi|408608610|gb|EKK82000.1| regulator of ribonuclease activity A [Escherichia coli 10.0821]
gi|412965305|emb|CCK49237.1| regulator of ribonuclease activity a [Escherichia coli chi7122]
gi|412971900|emb|CCJ46569.1| regulator of ribonuclease activity a [Escherichia coli]
gi|421934860|gb|EKT92597.1| ribonuclease activity regulator protein RraA [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421935895|gb|EKT93575.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H8 str. CFSAN001632]
gi|421937830|gb|EKT95426.1| ribonuclease activity regulator protein RraA [Escherichia coli
O111:H11 str. CFSAN001630]
gi|427200989|gb|EKV71396.1| regulator of ribonuclease activity A [Escherichia coli 89.0511]
gi|427201242|gb|EKV71638.1| regulator of ribonuclease activity A [Escherichia coli 88.1042]
gi|427204530|gb|EKV74806.1| regulator of ribonuclease activity A [Escherichia coli 88.1467]
gi|427217505|gb|EKV86567.1| regulator of ribonuclease activity A [Escherichia coli 90.0091]
gi|427221197|gb|EKV90065.1| regulator of ribonuclease activity A [Escherichia coli 90.2281]
gi|427224037|gb|EKV92759.1| regulator of ribonuclease activity A [Escherichia coli 90.0039]
gi|427237643|gb|EKW05172.1| regulator of ribonuclease activity A [Escherichia coli 93.0056]
gi|427237855|gb|EKW05378.1| regulator of ribonuclease activity A [Escherichia coli 93.0055]
gi|427242444|gb|EKW09855.1| regulator of ribonuclease activity A [Escherichia coli 94.0618]
gi|427255715|gb|EKW21964.1| regulator of ribonuclease activity A [Escherichia coli 95.0183]
gi|427257330|gb|EKW23461.1| regulator of ribonuclease activity A [Escherichia coli 95.0943]
gi|427257796|gb|EKW23913.1| regulator of ribonuclease activity A [Escherichia coli 95.1288]
gi|427272936|gb|EKW37642.1| regulator of ribonuclease activity A [Escherichia coli 96.0428]
gi|427274729|gb|EKW39376.1| regulator of ribonuclease activity A [Escherichia coli 96.0427]
gi|427288864|gb|EKW52465.1| regulator of ribonuclease activity A [Escherichia coli 96.0932]
gi|427295745|gb|EKW58831.1| regulator of ribonuclease activity A [Escherichia coli 96.0107]
gi|427297545|gb|EKW60579.1| regulator of ribonuclease activity A [Escherichia coli 97.0003]
gi|427307466|gb|EKW69920.1| regulator of ribonuclease activity A [Escherichia coli 97.1742]
gi|427310318|gb|EKW72574.1| regulator of ribonuclease activity A [Escherichia coli 97.0007]
gi|427315193|gb|EKW77202.1| regulator of ribonuclease activity A [Escherichia coli 99.0672]
gi|427325992|gb|EKW87419.1| regulator of ribonuclease activity A [Escherichia coli 99.0713]
gi|429250665|gb|EKY35317.1| regulator of ribonuclease activity A [Escherichia coli 96.0109]
gi|429354929|gb|EKY91624.1| RraA family protein [Escherichia coli O104:H4 str. 11-02030]
gi|429355671|gb|EKY92358.1| RraA family protein [Escherichia coli O104:H4 str. 11-02033-1]
gi|429356502|gb|EKY93178.1| RraA family protein [Escherichia coli O104:H4 str. 11-02092]
gi|429370671|gb|EKZ07235.1| RraA family protein [Escherichia coli O104:H4 str. 11-02093]
gi|429371131|gb|EKZ07691.1| RraA family protein [Escherichia coli O104:H4 str. 11-02281]
gi|429375354|gb|EKZ11891.1| RraA family protein [Escherichia coli O104:H4 str. 11-02318]
gi|429386792|gb|EKZ23238.1| RraA family protein [Escherichia coli O104:H4 str. 11-02913]
gi|429389169|gb|EKZ25591.1| RraA family protein [Escherichia coli O104:H4 str. 11-03439]
gi|429390278|gb|EKZ26693.1| RraA family protein [Escherichia coli O104:H4 str. 11-03943]
gi|429399838|gb|EKZ36157.1| RraA family protein [Escherichia coli O104:H4 str. 11-04080]
gi|429401765|gb|EKZ38062.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-9990]
gi|429404368|gb|EKZ40645.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-9450]
gi|429412625|gb|EKZ48818.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4984]
gi|429415345|gb|EKZ51511.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4986]
gi|429422861|gb|EKZ58972.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427442|gb|EKZ63526.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-4988]
gi|429431702|gb|EKZ67748.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437973|gb|EKZ73968.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-5604]
gi|429442322|gb|EKZ78280.1| RraA family protein [Escherichia coli O104:H4 str. Ec12-0465]
gi|429447493|gb|EKZ83412.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-6006]
gi|429454181|gb|EKZ90046.1| RraA family protein [Escherichia coli O104:H4 str. Ec12-0466]
gi|429458472|gb|EKZ94297.1| RraA family protein [Escherichia coli O104:H4 str. Ec11-9941]
gi|430871798|gb|ELB95425.1| RraA family protein [Escherichia coli KTE2]
gi|430872679|gb|ELB96277.1| RraA family protein [Escherichia coli KTE4]
gi|430882856|gb|ELC05926.1| RraA family protein [Escherichia coli KTE5]
gi|430890673|gb|ELC13302.1| RraA family protein [Escherichia coli KTE10]
gi|430893148|gb|ELC15484.1| RraA family protein [Escherichia coli KTE11]
gi|430895675|gb|ELC17937.1| RraA family protein [Escherichia coli KTE12]
gi|430902842|gb|ELC24646.1| RraA family protein [Escherichia coli KTE15]
gi|430911807|gb|ELC33076.1| RraA family protein [Escherichia coli KTE16]
gi|430913460|gb|ELC34582.1| RraA family protein [Escherichia coli KTE21]
gi|430919622|gb|ELC40543.1| RraA family protein [Escherichia coli KTE25]
gi|430922407|gb|ELC43163.1| RraA family protein [Escherichia coli KTE26]
gi|430925831|gb|ELC46433.1| RraA family protein [Escherichia coli KTE28]
gi|430932202|gb|ELC52635.1| RraA family protein [Escherichia coli KTE39]
gi|430935687|gb|ELC55987.1| RraA family protein [Escherichia coli KTE44]
gi|430941277|gb|ELC61434.1| RraA family protein [Escherichia coli KTE178]
gi|430949601|gb|ELC69032.1| RraA family protein [Escherichia coli KTE187]
gi|430949999|gb|ELC69392.1| RraA family protein [Escherichia coli KTE181]
gi|430959363|gb|ELC77689.1| RraA family protein [Escherichia coli KTE188]
gi|430961000|gb|ELC79049.1| RraA family protein [Escherichia coli KTE189]
gi|430970304|gb|ELC87376.1| RraA family protein [Escherichia coli KTE191]
gi|430976803|gb|ELC93659.1| RraA family protein [Escherichia coli KTE193]
gi|430978710|gb|ELC95513.1| RraA family protein [Escherichia coli KTE201]
gi|430985045|gb|ELD01655.1| RraA family protein [Escherichia coli KTE204]
gi|430990294|gb|ELD06738.1| RraA family protein [Escherichia coli KTE205]
gi|430995048|gb|ELD11356.1| RraA family protein [Escherichia coli KTE206]
gi|431001595|gb|ELD17176.1| RraA family protein [Escherichia coli KTE208]
gi|431003081|gb|ELD18568.1| RraA family protein [Escherichia coli KTE210]
gi|431012926|gb|ELD26676.1| RraA family protein [Escherichia coli KTE212]
gi|431025581|gb|ELD38683.1| RraA family protein [Escherichia coli KTE216]
gi|431030569|gb|ELD43579.1| RraA family protein [Escherichia coli KTE214]
gi|431034417|gb|ELD46352.1| RraA family protein [Escherichia coli KTE220]
gi|431037815|gb|ELD48790.1| RraA family protein [Escherichia coli KTE224]
gi|431046936|gb|ELD57026.1| RraA family protein [Escherichia coli KTE230]
gi|431047258|gb|ELD57263.1| RraA family protein [Escherichia coli KTE228]
gi|431059899|gb|ELD69246.1| RraA family protein [Escherichia coli KTE233]
gi|431066462|gb|ELD75091.1| RraA family protein [Escherichia coli KTE235]
gi|431066802|gb|ELD75425.1| RraA family protein [Escherichia coli KTE234]
gi|431070287|gb|ELD78593.1| RraA family protein [Escherichia coli KTE236]
gi|431075397|gb|ELD82919.1| RraA family protein [Escherichia coli KTE237]
gi|431080140|gb|ELD86946.1| RraA family protein [Escherichia coli KTE47]
gi|431088173|gb|ELD94078.1| RraA family protein [Escherichia coli KTE49]
gi|431089285|gb|ELD95108.1| RraA family protein [Escherichia coli KTE51]
gi|431096560|gb|ELE02024.1| RraA family protein [Escherichia coli KTE53]
gi|431104091|gb|ELE08698.1| RraA family protein [Escherichia coli KTE55]
gi|431111292|gb|ELE15197.1| RraA family protein [Escherichia coli KTE56]
gi|431113981|gb|ELE17538.1| RraA family protein [Escherichia coli KTE57]
gi|431117038|gb|ELE20309.1| RraA family protein [Escherichia coli KTE58]
gi|431125321|gb|ELE27750.1| RraA family protein [Escherichia coli KTE60]
gi|431130153|gb|ELE32262.1| RraA family protein [Escherichia coli KTE62]
gi|431136490|gb|ELE38358.1| RraA family protein [Escherichia coli KTE66]
gi|431145868|gb|ELE47473.1| RraA family protein [Escherichia coli KTE72]
gi|431150176|gb|ELE51233.1| RraA family protein [Escherichia coli KTE75]
gi|431155454|gb|ELE56210.1| RraA family protein [Escherichia coli KTE76]
gi|431159500|gb|ELE60046.1| RraA family protein [Escherichia coli KTE77]
gi|431166694|gb|ELE67001.1| RraA family protein [Escherichia coli KTE80]
gi|431175662|gb|ELE75661.1| RraA family protein [Escherichia coli KTE81]
gi|431176685|gb|ELE76628.1| RraA family protein [Escherichia coli KTE83]
gi|431177324|gb|ELE77256.1| RraA family protein [Escherichia coli KTE86]
gi|431186237|gb|ELE85799.1| RraA family protein [Escherichia coli KTE87]
gi|431187228|gb|ELE86741.1| RraA family protein [Escherichia coli KTE93]
gi|431196418|gb|ELE95345.1| RraA family protein [Escherichia coli KTE111]
gi|431206265|gb|ELF04690.1| RraA family protein [Escherichia coli KTE116]
gi|431207008|gb|ELF05321.1| RraA family protein [Escherichia coli KTE119]
gi|431209568|gb|ELF07674.1| RraA family protein [Escherichia coli KTE142]
gi|431216993|gb|ELF14585.1| RraA family protein [Escherichia coli KTE143]
gi|431218682|gb|ELF16117.1| RraA family protein [Escherichia coli KTE156]
gi|431230588|gb|ELF26367.1| RraA family protein [Escherichia coli KTE162]
gi|431233974|gb|ELF29550.1| RraA family protein [Escherichia coli KTE161]
gi|431239546|gb|ELF34023.1| RraA family protein [Escherichia coli KTE169]
gi|431239620|gb|ELF34096.1| RraA family protein [Escherichia coli KTE171]
gi|431251202|gb|ELF45220.1| RraA family protein [Escherichia coli KTE8]
gi|431254782|gb|ELF48050.1| RraA family protein [Escherichia coli KTE6]
gi|431261617|gb|ELF53646.1| RraA family protein [Escherichia coli KTE17]
gi|431270255|gb|ELF61426.1| RraA family protein [Escherichia coli KTE45]
gi|431270466|gb|ELF61631.1| RraA family protein [Escherichia coli KTE18]
gi|431280741|gb|ELF71656.1| RraA family protein [Escherichia coli KTE23]
gi|431289068|gb|ELF79815.1| RraA family protein [Escherichia coli KTE43]
gi|431289789|gb|ELF80524.1| RraA family protein [Escherichia coli KTE42]
gi|431293313|gb|ELF83693.1| RraA family protein [Escherichia coli KTE29]
gi|431299145|gb|ELF88721.1| RraA family protein [Escherichia coli KTE22]
gi|431304674|gb|ELF93201.1| RraA family protein [Escherichia coli KTE46]
gi|431315164|gb|ELG03092.1| RraA family protein [Escherichia coli KTE48]
gi|431321565|gb|ELG09166.1| RraA family protein [Escherichia coli KTE50]
gi|431323129|gb|ELG10682.1| RraA family protein [Escherichia coli KTE54]
gi|431323727|gb|ELG11199.1| RraA family protein [Escherichia coli KTE59]
gi|431333825|gb|ELG21008.1| RraA family protein [Escherichia coli KTE63]
gi|431334565|gb|ELG21723.1| RraA family protein [Escherichia coli KTE65]
gi|431352344|gb|ELG39122.1| RraA family protein [Escherichia coli KTE91]
gi|431354053|gb|ELG40804.1| RraA family protein [Escherichia coli KTE84]
gi|431359530|gb|ELG46167.1| RraA family protein [Escherichia coli KTE101]
gi|431359769|gb|ELG46395.1| RraA family protein [Escherichia coli KTE115]
gi|431373104|gb|ELG58764.1| RraA family protein [Escherichia coli KTE118]
gi|431377224|gb|ELG62357.1| RraA family protein [Escherichia coli KTE123]
gi|431380605|gb|ELG65245.1| RraA family protein [Escherichia coli KTE136]
gi|431381859|gb|ELG66210.1| RraA family protein [Escherichia coli KTE135]
gi|431391660|gb|ELG75270.1| RraA family protein [Escherichia coli KTE141]
gi|431396682|gb|ELG80159.1| RraA family protein [Escherichia coli KTE144]
gi|431400716|gb|ELG84083.1| RraA family protein [Escherichia coli KTE146]
gi|431407356|gb|ELG90568.1| RraA family protein [Escherichia coli KTE147]
gi|431416574|gb|ELG99048.1| RraA family protein [Escherichia coli KTE154]
gi|431421350|gb|ELH03563.1| RraA family protein [Escherichia coli KTE192]
gi|431423022|gb|ELH05152.1| RraA family protein [Escherichia coli KTE158]
gi|431425917|gb|ELH07963.1| RraA family protein [Escherichia coli KTE194]
gi|431429396|gb|ELH11325.1| RraA family protein [Escherichia coli KTE165]
gi|431434178|gb|ELH15830.1| RraA family protein [Escherichia coli KTE173]
gi|431435200|gb|ELH16813.1| RraA family protein [Escherichia coli KTE190]
gi|431439360|gb|ELH20695.1| RraA family protein [Escherichia coli KTE175]
gi|431458912|gb|ELH39231.1| RraA family protein [Escherichia coli KTE184]
gi|431459480|gb|ELH39774.1| RraA family protein [Escherichia coli KTE183]
gi|431466448|gb|ELH46469.1| RraA family protein [Escherichia coli KTE196]
gi|431467074|gb|ELH47086.1| RraA family protein [Escherichia coli KTE202]
gi|431476270|gb|ELH56064.1| RraA family protein [Escherichia coli KTE203]
gi|431477045|gb|ELH56831.1| RraA family protein [Escherichia coli KTE197]
gi|431484742|gb|ELH64414.1| RraA family protein [Escherichia coli KTE209]
gi|431486830|gb|ELH66476.1| RraA family protein [Escherichia coli KTE211]
gi|431490042|gb|ELH69665.1| RraA family protein [Escherichia coli KTE207]
gi|431493069|gb|ELH72664.1| RraA family protein [Escherichia coli KTE215]
gi|431501637|gb|ELH80616.1| RraA family protein [Escherichia coli KTE217]
gi|431503155|gb|ELH81892.1| RraA family protein [Escherichia coli KTE223]
gi|431513777|gb|ELH91858.1| RraA family protein [Escherichia coli KTE218]
gi|431520683|gb|ELH98004.1| RraA family protein [Escherichia coli KTE229]
gi|431521089|gb|ELH98338.1| RraA family protein [Escherichia coli KTE227]
gi|431525559|gb|ELI02344.1| RraA family protein [Escherichia coli KTE104]
gi|431526137|gb|ELI02897.1| RraA family protein [Escherichia coli KTE105]
gi|431530022|gb|ELI06712.1| RraA family protein [Escherichia coli KTE106]
gi|431539588|gb|ELI15335.1| RraA family protein [Escherichia coli KTE109]
gi|431545348|gb|ELI20004.1| RraA family protein [Escherichia coli KTE112]
gi|431547670|gb|ELI21966.1| RraA family protein [Escherichia coli KTE113]
gi|431551837|gb|ELI25804.1| RraA family protein [Escherichia coli KTE117]
gi|431561370|gb|ELI34752.1| RraA family protein [Escherichia coli KTE120]
gi|431564975|gb|ELI38120.1| RraA family protein [Escherichia coli KTE122]
gi|431565248|gb|ELI38385.1| RraA family protein [Escherichia coli KTE124]
gi|431577454|gb|ELI50089.1| RraA family protein [Escherichia coli KTE125]
gi|431578129|gb|ELI50744.1| RraA family protein [Escherichia coli KTE128]
gi|431581819|gb|ELI54261.1| RraA family protein [Escherichia coli KTE129]
gi|431592690|gb|ELI63260.1| RraA family protein [Escherichia coli KTE131]
gi|431597167|gb|ELI67080.1| RraA family protein [Escherichia coli KTE133]
gi|431599789|gb|ELI69468.1| RraA family protein [Escherichia coli KTE137]
gi|431606440|gb|ELI75817.1| RraA family protein [Escherichia coli KTE138]
gi|431611750|gb|ELI81017.1| RraA family protein [Escherichia coli KTE139]
gi|431615014|gb|ELI84145.1| RraA family protein [Escherichia coli KTE145]
gi|431623264|gb|ELI91938.1| RraA family protein [Escherichia coli KTE148]
gi|431623951|gb|ELI92576.1| RraA family protein [Escherichia coli KTE150]
gi|431629857|gb|ELI98203.1| RraA family protein [Escherichia coli KTE153]
gi|431638214|gb|ELJ06255.1| RraA family protein [Escherichia coli KTE157]
gi|431639449|gb|ELJ07308.1| RraA family protein [Escherichia coli KTE160]
gi|431641926|gb|ELJ09659.1| RraA family protein [Escherichia coli KTE163]
gi|431652924|gb|ELJ20044.1| RraA family protein [Escherichia coli KTE166]
gi|431654606|gb|ELJ21654.1| RraA family protein [Escherichia coli KTE167]
gi|431656891|gb|ELJ23865.1| RraA family protein [Escherichia coli KTE168]
gi|431666511|gb|ELJ33142.1| RraA family protein [Escherichia coli KTE174]
gi|431669144|gb|ELJ35572.1| RraA family protein [Escherichia coli KTE176]
gi|431672754|gb|ELJ38989.1| RraA family protein [Escherichia coli KTE177]
gi|431682981|gb|ELJ48626.1| RraA family protein [Escherichia coli KTE179]
gi|431683381|gb|ELJ49018.1| RraA family protein [Escherichia coli KTE180]
gi|431686972|gb|ELJ52526.1| RraA family protein [Escherichia coli KTE232]
gi|431697417|gb|ELJ62529.1| RraA family protein [Escherichia coli KTE82]
gi|431701035|gb|ELJ65958.1| RraA family protein [Escherichia coli KTE85]
gi|431701210|gb|ELJ66130.1| RraA family protein [Escherichia coli KTE88]
gi|431712677|gb|ELJ76958.1| RraA family protein [Escherichia coli KTE90]
gi|431716234|gb|ELJ80369.1| RraA family protein [Escherichia coli KTE94]
gi|431727767|gb|ELJ91506.1| RraA family protein [Escherichia coli KTE97]
gi|431731044|gb|ELJ94556.1| RraA family protein [Escherichia coli KTE99]
gi|432346756|gb|ELL41222.1| ribonuclease activity regulator protein RraA [Escherichia coli J96]
gi|443419918|gb|AGC84822.1| ribonuclease activity regulator protein RraA [Escherichia coli APEC
O78]
gi|444534865|gb|ELV15049.1| regulator of ribonuclease activity A [Escherichia coli 99.0814]
gi|444536318|gb|ELV16348.1| regulator of ribonuclease activity A [Escherichia coli 09BKT078844]
gi|444545176|gb|ELV24119.1| regulator of ribonuclease activity A [Escherichia coli 99.0815]
gi|444554217|gb|ELV31797.1| regulator of ribonuclease activity A [Escherichia coli 99.0816]
gi|444554333|gb|ELV31904.1| regulator of ribonuclease activity A [Escherichia coli 99.0839]
gi|444559126|gb|ELV36374.1| regulator of ribonuclease activity A [Escherichia coli 99.0848]
gi|444568828|gb|ELV45481.1| regulator of ribonuclease activity A [Escherichia coli 99.1753]
gi|444575717|gb|ELV51947.1| regulator of ribonuclease activity A [Escherichia coli 99.1793]
gi|444589218|gb|ELV64561.1| regulator of ribonuclease activity A [Escherichia coli PA11]
gi|444594558|gb|ELV69726.1| regulator of ribonuclease activity A [Escherichia coli ATCC 700728]
gi|444603014|gb|ELV77731.1| regulator of ribonuclease activity A [Escherichia coli PA13]
gi|444603112|gb|ELV77828.1| regulator of ribonuclease activity A [Escherichia coli PA19]
gi|444612275|gb|ELV86575.1| regulator of ribonuclease activity A [Escherichia coli PA2]
gi|444618609|gb|ELV92685.1| regulator of ribonuclease activity A [Escherichia coli PA47]
gi|444620165|gb|ELV94181.1| regulator of ribonuclease activity A [Escherichia coli PA48]
gi|444635035|gb|ELW08477.1| regulator of ribonuclease activity A [Escherichia coli 7.1982]
gi|444637021|gb|ELW10404.1| regulator of ribonuclease activity A [Escherichia coli 99.1781]
gi|444641847|gb|ELW15065.1| regulator of ribonuclease activity A [Escherichia coli 99.1762]
gi|444651658|gb|ELW24459.1| regulator of ribonuclease activity A [Escherichia coli PA35]
gi|444656910|gb|ELW29418.1| regulator of ribonuclease activity A [Escherichia coli 3.4880]
gi|444659289|gb|ELW31712.1| regulator of ribonuclease activity A [Escherichia coli 95.0083]
gi|444666556|gb|ELW38620.1| regulator of ribonuclease activity A [Escherichia coli 99.0670]
gi|449313328|gb|EMD03543.1| ribonuclease activity regulator protein RraA [Escherichia coli O08]
gi|449313963|gb|EMD04148.1| ribonuclease activity regulator protein RraA [Escherichia coli S17]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|127514298|ref|YP_001095495.1| ribonuclease activity regulator protein RraA [Shewanella loihica
PV-4]
gi|126639593|gb|ABO25236.1| protein of unknown function 1935 [Shewanella loihica PV-4]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L++ G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLIAEVLQQDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A++ N A N W GI+V G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALVDANIAEIAVANNWEGIIVYGSVRDVDALEDLDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ G+GE +P+ GG + +YAD GI++S L +
Sbjct: 119 ADGHGVGELEIPVNFGGVTFLPADHIYADNTGIILSPEPLDI 160
>gi|375258252|ref|YP_005017422.1| ribonuclease activity regulator protein RraA [Klebsiella oxytoca
KCTC 1686]
gi|397655192|ref|YP_006495894.1| ribonuclease E inhibitor RraA [Klebsiella oxytoca E718]
gi|402843294|ref|ZP_10891694.1| regulator of ribonuclease activity A [Klebsiella sp. OBRC7]
gi|423105739|ref|ZP_17093441.1| RraA family protein [Klebsiella oxytoca 10-5242]
gi|423126644|ref|ZP_17114323.1| RraA family protein [Klebsiella oxytoca 10-5250]
gi|365907730|gb|AEX03183.1| ribonuclease activity regulator protein RraA [Klebsiella oxytoca
KCTC 1686]
gi|376379983|gb|EHS92732.1| RraA family protein [Klebsiella oxytoca 10-5242]
gi|376396900|gb|EHT09537.1| RraA family protein [Klebsiella oxytoca 10-5250]
gi|394343927|gb|AFN30048.1| Ribonuclease E inhibitor RraA [Klebsiella oxytoca E718]
gi|402277420|gb|EJU26496.1| regulator of ribonuclease activity A [Klebsiella sp. OBRC7]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G G
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDMLEQNGRGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ + A N W G+VV G +R VD++ DIG++ALA+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDADLARLAVQNEWEGLVVYGAVRQVDDLEELDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|212554831|gb|ACJ27285.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Shewanella piezotolerans WP3]
Length = 161
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI + L+E G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNYGGCNSFGGSISTIKCFEDNGLIIDALQEDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A+L + A +N W GI++ G +RDVD + DIGV+ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALLDSSIAQVAVDNNWEGIIIYGSVRDVDALEDLDIGVQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 119 ADGNAVGEPEIPVNFGGVTFLPGDHVYADNTGIILSPEPLDI 160
>gi|148653435|ref|YP_001280528.1| ribonuclease activity regulator protein RraA [Psychrobacter sp.
PRwf-1]
gi|148572519|gb|ABQ94578.1| regulator of ribonuclease activity A [Psychrobacter sp. PRwf-1]
Length = 175
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 102/165 (61%), Gaps = 8/165 (4%)
Query: 6 TAEVCDANPQLIVSGELRALQ-PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL-----E 59
T ++ DANP+ V L ++ F +G + F G IVT+K FEDN ++E L +
Sbjct: 11 TCDLLDANPESQVC--LPNIEGKSFYSFGGKDRFCGEIVTVKCFEDNSRVKELLNTDGRD 68
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
KG G+VLVVDGGGS+RCA+LG A +NGWAG+VV GC+RDVD++ DIGV AL
Sbjct: 69 AKGEGKVLVVDGGGSMRCALLGDMIAQSAIDNGWAGVVVYGCVRDVDDMAQMDIGVMALG 128
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N++G G+ + I G ++ G +YAD +GI+ S L
Sbjct: 129 CIPRKSNRRGEGQTDIEIRFGDLTLNSGMIIYADNNGIIASDKPL 173
>gi|224004596|ref|XP_002295949.1| demethylmenaquinone methyltransferase [Thalassiosira pseudonana
CCMP1335]
gi|209585981|gb|ACI64666.1| demethylmenaquinone methyltransferase [Thalassiosira pseudonana
CCMP1335]
Length = 178
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 9/164 (5%)
Query: 5 TTAEVCD---ANPQLIVSGELRALQP-IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ A++CD ++PQ L ++P IF +G+ + F G I T++ FE N ++R L
Sbjct: 8 SLADLCDEHISSPQ-----RLSVVEPGIFFDFGKVKSFHGRIETVRCFESNPIVRTVLSS 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G RVL++DGG S R AILG A NN W+GI+VNGC+RD I G +IGV+AL +
Sbjct: 63 PGENRVLIIDGGASKRVAILGDQITQLAINNNWSGIIVNGCVRDSALIGGMEIGVKALGT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
HP+K+ K GE+ V + GG G W+YAD DGI++S +L
Sbjct: 123 HPVKSVKTYQGERGVIVNFGGVEFVPGWWVYADEDGIIVSEKQL 166
>gi|16762346|ref|NP_457963.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16767355|ref|NP_462970.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29143834|ref|NP_807176.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56415933|ref|YP_153008.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|167551414|ref|ZP_02345169.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167991665|ref|ZP_02572764.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168233034|ref|ZP_02658092.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237716|ref|ZP_02662774.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244152|ref|ZP_02669084.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168263005|ref|ZP_02684978.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467435|ref|ZP_02701272.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168821557|ref|ZP_02833557.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194445697|ref|YP_002043352.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194448857|ref|YP_002048092.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194471540|ref|ZP_03077524.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194735603|ref|YP_002117010.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197251367|ref|YP_002149017.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197263310|ref|ZP_03163384.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364860|ref|YP_002144497.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|198243443|ref|YP_002218015.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200387951|ref|ZP_03214563.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930355|ref|ZP_03221332.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205354335|ref|YP_002228136.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|207859276|ref|YP_002245927.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213025414|ref|ZP_03339861.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
gi|213161770|ref|ZP_03347480.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213426209|ref|ZP_03358959.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213586929|ref|ZP_03368755.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
gi|213615561|ref|ZP_03371387.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
gi|213648011|ref|ZP_03378064.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|213854823|ref|ZP_03383063.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
gi|224585900|ref|YP_002639699.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|238912235|ref|ZP_04656072.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|289808710|ref|ZP_06539339.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
gi|289828418|ref|ZP_06546300.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|374979589|ref|ZP_09720924.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375003963|ref|ZP_09728300.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|375121540|ref|ZP_09766707.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|375125210|ref|ZP_09770374.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|378447426|ref|YP_005235058.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378453010|ref|YP_005240370.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378701947|ref|YP_005183905.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378957171|ref|YP_005214658.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|378961691|ref|YP_005219177.1| hypothetical protein STBHUCCB_37110 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378986776|ref|YP_005249932.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378991371|ref|YP_005254535.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|379703336|ref|YP_005245064.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|383498688|ref|YP_005399377.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386589441|ref|YP_006085841.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|409247766|ref|YP_006888461.1| Regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416426931|ref|ZP_11693327.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|416432311|ref|ZP_11696145.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|416435900|ref|ZP_11698113.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|416448566|ref|ZP_11706393.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|416452893|ref|ZP_11709324.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|416461544|ref|ZP_11715333.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|416464389|ref|ZP_11716368.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|416476583|ref|ZP_11721135.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416488349|ref|ZP_11725816.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|416502134|ref|ZP_11732621.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416505629|ref|ZP_11734004.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|416518098|ref|ZP_11739721.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|416529185|ref|ZP_11744212.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|416537473|ref|ZP_11748913.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|416547726|ref|ZP_11754748.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|416548480|ref|ZP_11754874.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|416560629|ref|ZP_11761348.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|416573214|ref|ZP_11767701.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|416580181|ref|ZP_11771664.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|416587266|ref|ZP_11775920.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|416592761|ref|ZP_11779478.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|416600669|ref|ZP_11784560.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|416606071|ref|ZP_11787473.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|416616236|ref|ZP_11793917.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|416622784|ref|ZP_11797085.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|416632916|ref|ZP_11801612.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|416645325|ref|ZP_11807436.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|416649502|ref|ZP_11809919.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416658943|ref|ZP_11814538.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|416665009|ref|ZP_11816461.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|416679341|ref|ZP_11823004.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|416694402|ref|ZP_11827113.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|416704714|ref|ZP_11830405.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|416710846|ref|ZP_11834823.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|416717927|ref|ZP_11840116.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|416723897|ref|ZP_11844522.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|416729453|ref|ZP_11848035.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416742155|ref|ZP_11855624.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416743667|ref|ZP_11856241.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416758904|ref|ZP_11863872.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|416764065|ref|ZP_11867722.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|416769924|ref|ZP_11871327.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|417330187|ref|ZP_12114850.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417345185|ref|ZP_12125372.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417354051|ref|ZP_12130596.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417361939|ref|ZP_12135714.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417369621|ref|ZP_12140758.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417377215|ref|ZP_12146190.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417387228|ref|ZP_12151722.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417394714|ref|ZP_12156815.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417471223|ref|ZP_12167250.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|417479849|ref|ZP_12171789.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417514859|ref|ZP_12178555.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417521833|ref|ZP_12183444.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417526823|ref|ZP_12184730.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|417543061|ref|ZP_12194348.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418484511|ref|ZP_13053507.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|418492061|ref|ZP_13058563.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418494870|ref|ZP_13061316.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418499642|ref|ZP_13066047.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418505985|ref|ZP_13072327.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418507052|ref|ZP_13073379.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418511480|ref|ZP_13077735.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|418526335|ref|ZP_13092312.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|418763994|ref|ZP_13320098.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|418764499|ref|ZP_13320597.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|418769008|ref|ZP_13325046.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|418774636|ref|ZP_13330603.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|418779739|ref|ZP_13335636.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|418782535|ref|ZP_13338397.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|418787153|ref|ZP_13342958.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|418793661|ref|ZP_13349388.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|418800171|ref|ZP_13355833.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|418800501|ref|ZP_13356154.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|418807296|ref|ZP_13362860.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|418811458|ref|ZP_13366989.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|418818692|ref|ZP_13374162.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418821656|ref|ZP_13377080.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418827735|ref|ZP_13382854.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22462]
gi|418831507|ref|ZP_13386461.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|418838236|ref|ZP_13393084.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|418840796|ref|ZP_13395621.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|418845685|ref|ZP_13400465.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
gi|418849450|ref|ZP_13404182.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|418854840|ref|ZP_13409505.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
gi|418861200|ref|ZP_13415764.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|418865753|ref|ZP_13420223.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|418870534|ref|ZP_13424951.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
gi|419728583|ref|ZP_14255547.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419733618|ref|ZP_14260514.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419739011|ref|ZP_14265766.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419743961|ref|ZP_14270622.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419749308|ref|ZP_14275791.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|419786524|ref|ZP_14312248.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|419792891|ref|ZP_14318520.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|421359720|ref|ZP_15810008.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421362811|ref|ZP_15813062.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421365875|ref|ZP_15816083.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421373703|ref|ZP_15823842.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421376263|ref|ZP_15826371.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421380833|ref|ZP_15830894.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421383861|ref|ZP_15833891.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421389888|ref|ZP_15839870.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421395731|ref|ZP_15845664.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421400360|ref|ZP_15850247.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421402079|ref|ZP_15851940.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421409437|ref|ZP_15859228.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421410992|ref|ZP_15860763.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421416921|ref|ZP_15866639.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421419856|ref|ZP_15869539.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421428131|ref|ZP_15877746.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421431807|ref|ZP_15881385.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421435061|ref|ZP_15884606.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421441055|ref|ZP_15890526.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421445638|ref|ZP_15895060.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421448729|ref|ZP_15898121.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|421571031|ref|ZP_16016713.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421575524|ref|ZP_16021136.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421578770|ref|ZP_16024342.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421583476|ref|ZP_16028997.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|421885361|ref|ZP_16316557.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422028326|ref|ZP_16374638.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422033377|ref|ZP_16379455.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427556677|ref|ZP_18929960.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427574599|ref|ZP_18934552.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427595903|ref|ZP_18939467.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427620479|ref|ZP_18944349.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427644307|ref|ZP_18949237.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427658346|ref|ZP_18953960.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427663605|ref|ZP_18958863.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427680701|ref|ZP_18963754.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|427801696|ref|ZP_18969223.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|436604583|ref|ZP_20513265.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436646691|ref|ZP_20516584.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436796130|ref|ZP_20522692.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436806282|ref|ZP_20526527.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436814231|ref|ZP_20532173.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436830403|ref|ZP_20535301.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436848598|ref|ZP_20540189.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436854998|ref|ZP_20544363.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436861977|ref|ZP_20548830.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872106|ref|ZP_20555170.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436881477|ref|ZP_20560872.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436885549|ref|ZP_20562497.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436892970|ref|ZP_20567067.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436900367|ref|ZP_20571421.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436910930|ref|ZP_20577020.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436920735|ref|ZP_20583222.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436922970|ref|ZP_20584871.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436937338|ref|ZP_20592512.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436939829|ref|ZP_20593989.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436950130|ref|ZP_20599660.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436957941|ref|ZP_20603084.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436973076|ref|ZP_20610453.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436980148|ref|ZP_20613240.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436990535|ref|ZP_20616938.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437011238|ref|ZP_20624414.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437023293|ref|ZP_20628970.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437031568|ref|ZP_20631552.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437046093|ref|ZP_20638045.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437047592|ref|ZP_20638955.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437055047|ref|ZP_20643281.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437063812|ref|ZP_20648177.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437074282|ref|ZP_20653693.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437086247|ref|ZP_20660365.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437090387|ref|ZP_20662765.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437107063|ref|ZP_20667311.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437119521|ref|ZP_20670840.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437128301|ref|ZP_20675141.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437140310|ref|ZP_20682374.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437145088|ref|ZP_20685353.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437152264|ref|ZP_20689915.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437158626|ref|ZP_20693397.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437171956|ref|ZP_20700947.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437176129|ref|ZP_20703272.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437182486|ref|ZP_20707100.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437240315|ref|ZP_20714372.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|437264088|ref|ZP_20719729.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437271738|ref|ZP_20723927.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437275009|ref|ZP_20725580.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437297307|ref|ZP_20732817.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437310554|ref|ZP_20735681.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437330149|ref|ZP_20741436.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437339665|ref|ZP_20744208.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437389690|ref|ZP_20750960.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437414756|ref|ZP_20753668.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437436099|ref|ZP_20756624.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437458189|ref|ZP_20760761.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437480572|ref|ZP_20768411.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437487924|ref|ZP_20770165.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437502714|ref|ZP_20774706.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437526755|ref|ZP_20779936.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437562239|ref|ZP_20786470.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437577433|ref|ZP_20790896.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437587161|ref|ZP_20793572.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437602693|ref|ZP_20798592.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|437614938|ref|ZP_20801921.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|437634683|ref|ZP_20806931.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|437656538|ref|ZP_20810859.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437671171|ref|ZP_20815838.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437693939|ref|ZP_20821552.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437702871|ref|ZP_20824286.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437721223|ref|ZP_20828939.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|437774445|ref|ZP_20835909.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437809728|ref|ZP_20840721.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437819340|ref|ZP_20843001.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|437855928|ref|ZP_20847662.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|438082935|ref|ZP_20858007.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438098648|ref|ZP_20862870.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438108841|ref|ZP_20867106.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|438147383|ref|ZP_20876127.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|440764171|ref|ZP_20943202.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440768533|ref|ZP_20947502.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440771605|ref|ZP_20950520.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|445137767|ref|ZP_21383699.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|445140673|ref|ZP_21384982.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445156825|ref|ZP_21392781.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|445169661|ref|ZP_21395387.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445203817|ref|ZP_21401100.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|445227074|ref|ZP_21404162.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445257721|ref|ZP_21409507.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|445331786|ref|ZP_21414223.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|445344068|ref|ZP_21417439.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|445366572|ref|ZP_21425416.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|452122135|ref|YP_007472383.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|54039300|sp|P67652.1|RRAA_SALTI RecName: Full=Regulator of ribonuclease activity A
gi|54042301|sp|P67651.1|RRAA_SALTY RecName: Full=Regulator of ribonuclease activity A
gi|81599601|sp|Q5PIS0.1|RRAA_SALPA RecName: Full=Regulator of ribonuclease activity A
gi|226703234|sp|B5F0S0.1|RRAA_SALA4 RecName: Full=Regulator of ribonuclease activity A
gi|226703235|sp|B5FPT8.1|RRAA_SALDC RecName: Full=Regulator of ribonuclease activity A
gi|226703236|sp|B5QXL8.1|RRAA_SALEP RecName: Full=Regulator of ribonuclease activity A
gi|226703237|sp|B5RF82.1|RRAA_SALG2 RecName: Full=Regulator of ribonuclease activity A
gi|226703238|sp|B4TCM6.1|RRAA_SALHS RecName: Full=Regulator of ribonuclease activity A
gi|226703239|sp|B4T0T6.1|RRAA_SALNS RecName: Full=Regulator of ribonuclease activity A
gi|226703240|sp|B5BJK6.1|RRAA_SALPK RecName: Full=Regulator of ribonuclease activity A
gi|226703241|sp|B4TPV0.1|RRAA_SALSV RecName: Full=Regulator of ribonuclease activity A
gi|254809482|sp|C0Q439.1|RRAA_SALPC RecName: Full=Regulator of ribonuclease activity A
gi|25512345|pir||AD0939 menaquinone biosynthesis protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422656|gb|AAL22929.1| putative methyltransferase in menaquinone biosynthesis protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16504650|emb|CAD09534.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139470|gb|AAO71036.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56130190|gb|AAV79696.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|194404360|gb|ACF64582.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194407161|gb|ACF67380.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457904|gb|EDX46743.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194711105|gb|ACF90326.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630124|gb|EDX48764.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197096337|emb|CAR61941.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197215070|gb|ACH52467.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197241565|gb|EDY24185.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289410|gb|EDY28775.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197937959|gb|ACH75292.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199605049|gb|EDZ03594.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320759|gb|EDZ05961.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205274116|emb|CAR39125.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205323699|gb|EDZ11538.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205330044|gb|EDZ16808.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205332842|gb|EDZ19606.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336903|gb|EDZ23667.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341809|gb|EDZ28573.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205348181|gb|EDZ34812.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206711079|emb|CAR35453.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224470428|gb|ACN48258.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261249205|emb|CBG27067.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267996389|gb|ACY91274.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301160596|emb|CBW20127.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312915205|dbj|BAJ39179.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320088500|emb|CBY98259.1| Regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321225381|gb|EFX50439.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613148|gb|EFY10092.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619224|gb|EFY16107.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322626091|gb|EFY22903.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322626449|gb|EFY23255.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322632437|gb|EFY29185.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322635081|gb|EFY31802.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642717|gb|EFY39307.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322646457|gb|EFY42968.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650755|gb|EFY47156.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322652939|gb|EFY49276.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657253|gb|EFY53533.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322662259|gb|EFY58474.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666792|gb|EFY62968.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672064|gb|EFY68179.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322675785|gb|EFY71857.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322681798|gb|EFY77824.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322684006|gb|EFY80015.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323132435|gb|ADX19865.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323193278|gb|EFZ78493.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323197635|gb|EFZ82768.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323200790|gb|EFZ85861.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323211407|gb|EFZ96248.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323218548|gb|EGA03256.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323220970|gb|EGA05402.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323225947|gb|EGA10166.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323231626|gb|EGA15738.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236126|gb|EGA20204.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239453|gb|EGA23502.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243954|gb|EGA27965.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249316|gb|EGA33233.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323250441|gb|EGA34324.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323258895|gb|EGA42547.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323260139|gb|EGA43762.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265258|gb|EGA48755.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323270480|gb|EGA53926.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326625807|gb|EGE32152.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326629460|gb|EGE35803.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|332990918|gb|AEF09901.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|353074038|gb|EHB39801.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353562840|gb|EHC29346.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353562854|gb|EHC29355.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353582717|gb|EHC43288.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353583818|gb|EHC44081.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353590596|gb|EHC49072.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353600981|gb|EHC56716.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353604670|gb|EHC59387.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353623346|gb|EHC72641.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353632618|gb|EHC79640.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353636463|gb|EHC82512.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353640462|gb|EHC85452.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353657469|gb|EHC97901.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353669159|gb|EHD06146.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357207782|gb|AET55828.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357953266|gb|EHJ79864.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|363552880|gb|EHL37159.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|363555894|gb|EHL40114.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|363559386|gb|EHL43553.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|363563172|gb|EHL47251.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|363571067|gb|EHL54985.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|363571914|gb|EHL55810.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|363574734|gb|EHL58597.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|366058538|gb|EHN22825.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|366058835|gb|EHN23115.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366060532|gb|EHN24794.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366066672|gb|EHN30832.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366070757|gb|EHN34863.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366082013|gb|EHN45951.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366084652|gb|EHN48556.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|366828840|gb|EHN55720.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372205667|gb|EHP19174.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|374355563|gb|AEZ47324.1| hypothetical protein STBHUCCB_37110 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|379984968|emb|CCF88830.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|380465509|gb|AFD60912.1| menaquinone biosynthesis protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381298704|gb|EIC39779.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381299688|gb|EIC40758.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381300550|gb|EIC41610.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381310594|gb|EIC51421.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381311612|gb|EIC52426.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|383796485|gb|AFH43567.1| Ribonuclease E inhibitor RraA [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392617915|gb|EIX00329.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392621507|gb|EIX03861.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392730903|gb|EIZ88138.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|392741174|gb|EIZ98284.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|392743136|gb|EJA00213.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|392750661|gb|EJA07622.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|392751383|gb|EJA08333.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|392759727|gb|EJA16570.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|392761511|gb|EJA18331.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|392764155|gb|EJA20959.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|392767325|gb|EJA24096.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|392779221|gb|EJA35891.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|392780284|gb|EJA36940.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|392783875|gb|EJA40485.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|392784875|gb|EJA41457.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392790232|gb|EJA46733.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392796272|gb|EJA52609.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|392797142|gb|EJA53461.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22462]
gi|392799606|gb|EJA55863.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|392809936|gb|EJA65963.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|392812298|gb|EJA68288.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
gi|392821297|gb|EJA77124.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|392823377|gb|EJA79174.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
gi|392824843|gb|EJA80606.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|392826828|gb|EJA82547.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|392830622|gb|EJA86270.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
gi|395984224|gb|EJH93413.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|395988936|gb|EJH98072.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|395992408|gb|EJI01525.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395996029|gb|EJI05082.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|396002478|gb|EJI11469.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396002621|gb|EJI11611.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396011654|gb|EJI20561.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396015818|gb|EJI24688.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396020848|gb|EJI29686.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396023968|gb|EJI32759.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396025227|gb|EJI34008.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396032747|gb|EJI41464.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396043557|gb|EJI52156.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396047096|gb|EJI55673.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396047401|gb|EJI55975.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396049958|gb|EJI58495.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396051630|gb|EJI60146.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396058762|gb|EJI67222.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396064658|gb|EJI73042.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396065220|gb|EJI73598.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|396072676|gb|EJI80985.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|402521974|gb|EJW29305.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402522179|gb|EJW29504.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402523712|gb|EJW31023.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402531966|gb|EJW39166.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|414012075|gb|EKS96008.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414013299|gb|EKS97186.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414013545|gb|EKS97430.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414027229|gb|EKT10473.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414028122|gb|EKT11323.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414030576|gb|EKT13674.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414041398|gb|EKT23971.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414041963|gb|EKT24515.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414046587|gb|EKT28908.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414055514|gb|EKT37407.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|414061335|gb|EKT42753.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|434938445|gb|ELL45416.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|434961648|gb|ELL54914.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434969589|gb|ELL62280.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434972553|gb|ELL65002.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434974384|gb|ELL66752.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434983993|gb|ELL75767.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434989432|gb|ELL80984.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434993318|gb|ELL84742.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434999405|gb|ELL90580.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435000529|gb|ELL91673.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435003993|gb|ELL94990.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435012874|gb|ELM03548.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435020175|gb|ELM10595.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435022319|gb|ELM12651.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435027427|gb|ELM17550.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435027520|gb|ELM17641.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435030783|gb|ELM20778.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|435035974|gb|ELM25812.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435042474|gb|ELM32193.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435047135|gb|ELM36730.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435052725|gb|ELM42211.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435054666|gb|ELM44094.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435056492|gb|ELM45882.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435064964|gb|ELM54071.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435067664|gb|ELM56703.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435070066|gb|ELM59063.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435075255|gb|ELM64076.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435078849|gb|ELM67568.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435080892|gb|ELM69559.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435099143|gb|ELM87360.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435100219|gb|ELM88402.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435101930|gb|ELM90062.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435103670|gb|ELM91746.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435107226|gb|ELM95222.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435114391|gb|ELN02196.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435120855|gb|ELN08418.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435129003|gb|ELN16328.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435129163|gb|ELN16469.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435130368|gb|ELN17624.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435137946|gb|ELN24980.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435142751|gb|ELN29631.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435145611|gb|ELN32422.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435150918|gb|ELN37580.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435155906|gb|ELN42409.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435160469|gb|ELN46748.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435164535|gb|ELN50617.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435169522|gb|ELN55293.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435175601|gb|ELN61018.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435179004|gb|ELN64167.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435179910|gb|ELN65029.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435184605|gb|ELN69528.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435189883|gb|ELN74496.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435195222|gb|ELN79625.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435200216|gb|ELN84218.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435202650|gb|ELN86475.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435213503|gb|ELN96387.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435218389|gb|ELO00791.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435222937|gb|ELO05006.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435232329|gb|ELO13436.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435237334|gb|ELO18025.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435237683|gb|ELO18350.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435242981|gb|ELO23280.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435247578|gb|ELO27510.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435259034|gb|ELO38266.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435259505|gb|ELO38729.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435263228|gb|ELO42294.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435272012|gb|ELO50448.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435278846|gb|ELO56670.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435280419|gb|ELO58139.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435281183|gb|ELO58859.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|435294032|gb|ELO70681.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435294507|gb|ELO71136.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|435299063|gb|ELO75234.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435305143|gb|ELO80692.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435307589|gb|ELO82695.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|435320222|gb|ELO92882.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435326274|gb|ELO98102.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435332916|gb|ELP03803.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|435337303|gb|ELP06924.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|436417057|gb|ELP14954.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|436417218|gb|ELP15114.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436421180|gb|ELP19030.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|444844269|gb|ELX69513.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|444846885|gb|ELX72037.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|444851952|gb|ELX77035.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444862289|gb|ELX87147.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|444863278|gb|ELX88106.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444867252|gb|ELX91948.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444877245|gb|ELY01396.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|444880713|gb|ELY04781.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|444882694|gb|ELY06635.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|444888937|gb|ELY12437.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|451911139|gb|AGF82945.1| ribonuclease activity regulator protein RraA [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 161
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAELARLATQNEWEGLVIYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|406676220|ref|ZP_11083406.1| RraA family protein [Aeromonas veronii AMC35]
gi|404626443|gb|EKB23253.1| RraA family protein [Aeromonas veronii AMC35]
Length = 159
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD + L L+ P+FQ +G + +F G VTL +EDN L+R+ + G+G+V+
Sbjct: 7 DLCDQHGDL-----LQVADPVFQDFGGKTIFYGRAVTLSCYEDNSLVRDLVTRPGHGKVM 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
V+DGGGSLR A+LG V+A GW GI+++G RDV + +GV+ALA+ P+K K
Sbjct: 62 VIDGGGSLRRALLGDQLAVKAVEQGWEGILIHGAARDVGTLATLALGVKALAACPVKTEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+G+GE ++ G I +G+++YAD +G+++S L
Sbjct: 122 RGLGELGAVVSFAGVTIHEGDYVYADRNGVVVSATPL 158
>gi|422021136|ref|ZP_16367649.1| ribonuclease activity regulator protein RraA [Providencia sneebia
DSM 19967]
gi|414099605|gb|EKT61244.1| ribonuclease activity regulator protein RraA [Providencia sneebia
DSM 19967]
Length = 172
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 98/160 (61%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R FSG ++T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQESVNVVEPLFSNFGGRTSFSGQVITVKCFEDNGLLYDLLEEDGQGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD + D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALIDAEVARLAVDNHWEGIVVYGAVRQVDILMELDLGIQAIAAMPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE + + GG G++LYAD GI++S L+
Sbjct: 120 PDEGIGESDIRVNFGGVTFFSGDYLYADNTGIILSEEPLT 159
>gi|93006489|ref|YP_580926.1| ribonuclease activity regulator protein RraA [Psychrobacter
cryohalolentis K5]
gi|92394167|gb|ABE75442.1| Protein of unknown function 1935 [Psychrobacter cryohalolentis K5]
Length = 177
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 103/165 (62%), Gaps = 8/165 (4%)
Query: 6 TAEVCDANPQLIVSGELRALQ-PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL-----E 59
T ++ DANP+ V L ++ F +G + F G IVT+K FEDN ++ L +
Sbjct: 14 TCDLLDANPESQVC--LPNIEGKSFYSFGGKDKFCGEIVTVKCFEDNSRVKSLLNNDGKD 71
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
+ GNG+VLVVDGGGS+RCA+LG A +NGWAG+VV GC+RDVD++ DIGV AL
Sbjct: 72 KDGNGKVLVVDGGGSMRCALLGDMIAQSAIDNGWAGVVVYGCVRDVDDMAAMDIGVMALG 131
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N++ G+ + I+ G ++ G ++YAD +GI+ S L
Sbjct: 132 CIPRKSNRRDEGQTDLEISFGDLTLNSGMFVYADNNGIIASDKPL 176
>gi|423142596|ref|ZP_17130234.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379049809|gb|EHY67703.1| regulator of ribonuclease activity A [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 161
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAELARLAAQNEWEGLVIYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|238754736|ref|ZP_04616088.1| Regulator of ribonuclease activity A protein 2 [Yersinia ruckeri
ATCC 29473]
gi|238707044|gb|EEP99409.1| Regulator of ribonuclease activity A protein 2 [Yersinia ruckeri
ATCC 29473]
Length = 161
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+ D I ++ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELSD-----IYHEDINVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVNAELASLAAANEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ASEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDI 160
>gi|397171009|ref|ZP_10494419.1| ribonuclease activity regulator protein RraA [Alishewanella
aestuarii B11]
gi|396087483|gb|EJI85083.1| ribonuclease activity regulator protein RraA [Alishewanella
aestuarii B11]
Length = 178
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + ++ ++PIF YG R+ F G I T+K FEDN LIR+ L + G G+
Sbjct: 22 TSELCD-----LYADQVDVVEPIFANYGGRRSFGGQIHTVKCFEDNGLIRQVLADNGIGK 76
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A++ A NGW GIV G +RD+D + DIG++A+ + P+ A
Sbjct: 77 VLLIDGGGSARRALIDAELASLAATNGWEGIVCYGSVRDLDALEDFDIGIQAVNAIPIGA 136
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ G GE VP+ G G+ LYAD+ GI++S L +
Sbjct: 137 DDNGFGETEVPVNFAGVTFLPGDHLYADSTGIILSPEALDI 177
>gi|268593394|ref|ZP_06127615.1| regulator of ribonuclease activity A [Providencia rettgeri DSM
1131]
gi|291311091|gb|EFE51544.1| regulator of ribonuclease activity A [Providencia rettgeri DSM
1131]
Length = 174
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLVYDLLEEDGTGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD + D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALIDAEIARLAVDNHWEGIVVYGAVRQVDTLMELDLGIQAIAAMPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE + + GG G++LYAD GI++S L+
Sbjct: 120 PDEGIGESDIRVNFGGVTFFSGDYLYADNTGIILSEEPLT 159
>gi|153000532|ref|YP_001366213.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS185]
gi|151365150|gb|ABS08150.1| regulator of ribonuclease activity A [Shewanella baltica OS185]
Length = 164
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Query: 9 VCDANPQLI--VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRV 66
+ D P L +L+ L F+ YG +++F G IVT+K FEDN ++E L + G G+V
Sbjct: 1 MLDLLPDLFDHYPSKLQLLPLEFKPYGGKRLFWGEIVTVKCFEDNSKVKEILAQDGQGKV 60
Query: 67 LVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKAN 126
LVVDGGGSLR A+LG A +NGW GIV+NGC+RDV +N ++GV AL + P+K
Sbjct: 61 LVVDGGGSLRRALLGDLIAQSALDNGWQGIVINGCVRDVARLNTFNLGVYALGAMPIKTE 120
Query: 127 KKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G+ +V + +GG ++ G LYAD +GI +S L+
Sbjct: 121 KLDQGQINVAVDMGGVMVTPGMMLYADENGIAVSDEMLN 159
>gi|37528580|ref|NP_931925.1| ribonuclease activity regulator protein RraA [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|61216007|sp|Q7MYB9.1|RRAA_PHOLL RecName: Full=Regulator of ribonuclease activity A
gi|36788018|emb|CAE17137.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 169
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LE+ G+GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPMFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEDNGHGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A NGW GIVV G +R VD++ D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRQALINAELAQLAVQNGWEGIVVYGAVRQVDQLAEFDLGIQAIAAIPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G G + + GG G++LYAD GI++S L +
Sbjct: 120 RDEGTGASDIRVNFGGVTFFSGDYLYADNTGIILSEEPLEL 160
>gi|283787390|ref|YP_003367255.1| regulator of ribonuclease activity A [Citrobacter rodentium ICC168]
gi|282950844|emb|CBG90521.1| regulator of ribonuclease activity A [Citrobacter rodentium ICC168]
Length = 161
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G IVT+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIVTVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W G+VV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAELARLAVQNEWEGLVVYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|296105373|ref|YP_003615519.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295059832|gb|ADF64570.1| ribonuclease activity regulator protein RraA [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 161
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALIDAELAGIAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|333369373|ref|ZP_08461495.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Psychrobacter sp. 1501(2011)]
gi|332971664|gb|EGK10613.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Psychrobacter sp. 1501(2011)]
Length = 174
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 102/165 (61%), Gaps = 8/165 (4%)
Query: 6 TAEVCDANPQLIVSGELRALQ-PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL-----E 59
T ++ DANP+ V L ++ F +G + F G IVT+K FEDN ++E L +
Sbjct: 11 TCDLLDANPESQVC--LPNIEGKSFYSFGGKDKFCGEIVTVKCFEDNSRVKELLNSDGRD 68
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
G G++LVVDGGGS+RCA+LG A +NGW G+VV GC+RDVD++ DIGV AL
Sbjct: 69 ANGEGKILVVDGGGSMRCALLGDMIAQSAIDNGWTGVVVYGCVRDVDDMAQMDIGVMALG 128
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N++G G+ + I+ G ++ G ++YAD +GI+ S L
Sbjct: 129 CIPRKSNRRGEGQTDLEISFGDLTLNSGMYVYADNNGIIASEKPL 173
>gi|406028527|ref|YP_006727416.1| Regulator of ribonuclease activity A [Mycobacterium indicus pranii
MTCC 9506]
gi|405127074|gb|AFS12329.1| Regulator of ribonuclease activity A [Mycobacterium indicus pranii
MTCC 9506]
Length = 164
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 99/154 (64%), Gaps = 5/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D+ + ++R+ F+ G R F+GPI T++ F+DN L++ L E G+G
Sbjct: 11 TADLVDS-----IGPDVRSCDTQFRQLGGRAEFAGPISTVRCFQDNALLKSVLSEPGDGG 65
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+LV+DG GSL A++G A++NGWAG+++NG +RD + G DIG++AL ++P K+
Sbjct: 66 ILVIDGAGSLHTALVGDVIAELARSNGWAGLIINGAVRDSAALRGMDIGIKALGTNPRKS 125
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K G GE+ V IT+GG GE Y+D DGI++
Sbjct: 126 TKTGAGERDVEITLGGVTFVPGEIAYSDDDGIVV 159
>gi|270265179|ref|ZP_06193441.1| regulator of ribonuclease activity A [Serratia odorifera 4Rx13]
gi|270040813|gb|EFA13915.1| regulator of ribonuclease activity A [Serratia odorifera 4Rx13]
Length = 161
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R V+++ DIG++A+A+ P A
Sbjct: 60 VLLIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVEDLEELDIGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI++S L +
Sbjct: 120 ISEGVGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|386288388|ref|ZP_10065530.1| ribonuclease activity regulator protein RraA [gamma proteobacterium
BDW918]
gi|385278577|gb|EIF42547.1| ribonuclease activity regulator protein RraA [gamma proteobacterium
BDW918]
Length = 163
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 99/165 (60%), Gaps = 5/165 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M ++T ++CD + +R L+ F+ YG +Q F G IVT+K FEDN + E ++
Sbjct: 1 MNTISTPDLCDEH-----GDNVRVLEVNFRHYGGKQHFWGEIVTIKCFEDNSKVAEMVKT 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GN RVLVVDGG S R ++LG N A +NGW GIV+ G +RDV+E+ IG+ AL S
Sbjct: 56 PGNNRVLVVDGGASPRRSLLGDNLARAAADNGWHGIVIYGYLRDVEELANMPIGIMALGS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
P K K G G ++ + GGT + GE LYAD G +IS+ L+
Sbjct: 116 VPRKTEKLGDGRCNIALEFGGTTLYPGEHLYADLSGAIISKQPLT 160
>gi|421497325|ref|ZP_15944497.1| rraA-2 [Aeromonas media WS]
gi|407183671|gb|EKE57556.1| rraA-2 [Aeromonas media WS]
Length = 161
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD ++ L+P+ +G R F G I T+K FE N LIRE ++E G GR
Sbjct: 5 TSELCDIYQDMV-----DVLEPMLCSFGGRASFGGVITTVKCFESNGLIREVVKENGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIV GC+R+VD + DIG++ALA+ P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSEIATTAAENEWEGIVCYGCVREVDILEDLDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K +GE +P+ GG + LYADT G+++S L +
Sbjct: 120 DHKDVGETDLPVNFGGVTFLPDDHLYADTTGVILSPDALDI 160
>gi|212557031|gb|ACJ29485.1| Demethylmenaquinone methyltransferase [Shewanella piezotolerans
WP3]
Length = 165
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++ D+ P+ L L P+F+ +GR F G +VT+K F+DN L++E L + G G+VL
Sbjct: 7 DLFDSYPE-----HLSLLPPMFKSFGREDCFWGEVVTVKCFKDNSLVKEELSKNGKGKVL 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
VVDG G CA+LG A+ NGW G+V+ GC+RDV + IG++A+ +P+K K
Sbjct: 62 VVDGQGVTDCALLGDMIAKNAEVNGWQGVVIFGCVRDVSALKTMKIGIQAIGINPIKTVK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KG+GE +V + I G IS ++YAD +GI IS L +
Sbjct: 122 KGLGELNVAVEIYGVIISPHSYVYADLNGIAISNQALDL 160
>gi|126174216|ref|YP_001050365.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS155]
gi|386340974|ref|YP_006037340.1| ribonuclease activity A regulator [Shewanella baltica OS117]
gi|125997421|gb|ABN61496.1| regulator of ribonuclease activity A [Shewanella baltica OS155]
gi|334863375|gb|AEH13846.1| regulator of ribonuclease activity A [Shewanella baltica OS117]
Length = 164
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 95/145 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L+ L F+ YG +++F G IV +K FEDN ++E L + G G+VLVVDGGGSLR A+L
Sbjct: 15 KLQLLPLEFKPYGGKRLFWGEIVIVKCFEDNSKVKEILAQDGQGKVLVVDGGGSLRRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW GIV+NGC+RDV +N +GV AL + P+K K G G+ +V + +G
Sbjct: 75 GDLIAQSALDNGWQGIVINGCVRDVARLNTFSLGVYALGAMPIKTEKLGQGQINVAVDMG 134
Query: 141 GTRISDGEWLYADTDGILISRAELS 165
G ++ G LYAD +GI +S L+
Sbjct: 135 GVMVTPGMMLYADENGIAVSDEMLN 159
>gi|410087589|ref|ZP_11284292.1| Ribonuclease E inhibitor RraA [Morganella morganii SC01]
gi|421493042|ref|ZP_15940400.1| RRAA [Morganella morganii subsp. morganii KT]
gi|455737735|ref|YP_007504001.1| Ribonuclease E inhibitor RraA [Morganella morganii subsp. morganii
KT]
gi|400192670|gb|EJO25808.1| RRAA [Morganella morganii subsp. morganii KT]
gi|409766033|gb|EKN50131.1| Ribonuclease E inhibitor RraA [Morganella morganii SC01]
gi|455419298|gb|AGG29628.1| Ribonuclease E inhibitor RraA [Morganella morganii subsp. morganii
KT]
Length = 177
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G F+G I T+K FEDN L+ + LEE+G GR
Sbjct: 8 TSELCD-----IYQENVNVVEPLFSNFGGCSSFAGQITTVKCFEDNGLLFDLLEEEGEGR 62
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A NGW GIVV G +R VD++ DIG++A+A+ P
Sbjct: 63 ILLVDGGGSVRRALVDAELAALAVQNGWEGIVVYGAVRQVDDLAEMDIGIQAMAAIPAGC 122
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIG+ + + GG G++LYAD GI++S L++
Sbjct: 123 GSEGIGDSDIRVNFGGVTFFSGDYLYADNTGIILSDIPLTL 163
>gi|365847473|ref|ZP_09387960.1| regulator of ribonuclease activity A [Yokenella regensburgei ATCC
43003]
gi|364572252|gb|EHM49807.1| regulator of ribonuclease activity A [Yokenella regensburgei ATCC
43003]
Length = 161
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCDMYQE-----DVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDMLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ + A N W GIVV G +R VD++ D+G++ALA+ P+ A
Sbjct: 60 ILLVDGGGSVRRALIDADLGRLAMQNEWEGIVVYGAVRQVDDLVDLDLGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|228998108|ref|ZP_04157707.1| Regulator of ribonuclease activity A [Bacillus mycoides Rock3-17]
gi|228761643|gb|EEM10590.1| Regulator of ribonuclease activity A [Bacillus mycoides Rock3-17]
Length = 161
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 5/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA G+++ +PIFQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDA-----FEGDVQVCKPIFQSYGKKERFHGKIATVKVKDDNVLVKEALQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+V GC+RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLANIAKERNIAGIIVYGCVRDSKELRNINIGILALGTMPKRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+G GE +P+ G + +++YAD DGI++
Sbjct: 119 RKEGKGETEIPLQFGEIKWIPNQYVYADEDGIIV 152
>gi|114561664|ref|YP_749177.1| ribonuclease activity regulator protein RraA [Shewanella
frigidimarina NCIMB 400]
gi|114332957|gb|ABI70339.1| regulator of ribonuclease activity A [Shewanella frigidimarina
NCIMB 400]
Length = 161
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI + LEE G G
Sbjct: 4 NTSELCDMYIDVV-----DVVEPMFSNYGGCSSFGGSISTIKCFEDNGLIADALEEDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A+L A N W GI++ G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALLDARIAEIAVANNWEGILIYGSVRDVDALEELDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A G+GE +P+ GG G+ +YAD G+++S L +
Sbjct: 119 AESNGVGEVEIPVNFGGVTFLPGDHIYADNTGVILSPEPLDI 160
>gi|237728042|ref|ZP_04558523.1| ribonuclease activity regulator protein RraA [Citrobacter sp. 30_2]
gi|226910299|gb|EEH96217.1| ribonuclease activity regulator protein RraA [Citrobacter sp. 30_2]
Length = 161
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 ILLVDGGGSVRRALVDAELARLAVQNEWEGLVIYGSVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 SGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|423202403|ref|ZP_17188982.1| RraA family protein [Aeromonas veronii AER39]
gi|404614599|gb|EKB11578.1| RraA family protein [Aeromonas veronii AER39]
Length = 159
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD + L L+ P+FQ +G + +F G VTL +EDN L+R+ + G+G+V+
Sbjct: 7 DLCDQHGDL-----LQVADPVFQDFGGKALFYGRAVTLSCYEDNSLVRDLVTRPGHGKVM 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
V+DGGGSLR A+LG V+A GW GI+++G RDV + +GV+ALA+ P+K K
Sbjct: 62 VIDGGGSLRRALLGDQLAVKAVEQGWEGILIHGAARDVGTLATLALGVKALAACPVKTEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+G+GE ++ G I +G+++YAD +G+++S L
Sbjct: 122 RGLGELGAVVSFAGVTIHEGDYVYADRNGVVVSATPL 158
>gi|379759617|ref|YP_005346014.1| ribonuclease activity regulator protein RraA [Mycobacterium
intracellulare MOTT-64]
gi|378807559|gb|AFC51693.1| ribonuclease activity regulator protein RraA [Mycobacterium
intracellulare MOTT-64]
Length = 161
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 99/154 (64%), Gaps = 5/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D+ + ++R+ F+ G R F+GPI T++ F+DN L++ L E G+G
Sbjct: 8 TADLVDS-----IGPDVRSCDTQFRQLGGRAEFAGPISTVRCFQDNALLKSVLSEPGDGG 62
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+LV+DG GSL A++G A++NGWAG+++NG +RD + G DIG++AL ++P K+
Sbjct: 63 ILVIDGAGSLHTALVGDVIAELARSNGWAGLIINGAVRDSAALRGMDIGIKALGTNPRKS 122
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K G GE+ V IT+GG GE Y+D DGI++
Sbjct: 123 TKTGAGERDVEITLGGVTFVPGEIAYSDDDGIVV 156
>gi|152978197|ref|YP_001343826.1| ribonuclease activity regulator protein RraA [Actinobacillus
succinogenes 130Z]
gi|171704187|sp|A6VLP4.1|RRAA_ACTSZ RecName: Full=Regulator of ribonuclease activity A
gi|150839920|gb|ABR73891.1| Ribonuclease E inhibitor RraA [Actinobacillus succinogenes 130Z]
Length = 166
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ + PIF +G Q F G + T+K FE N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVDPIFSSFGGVQAFYGKVTTVKCFETNGLIEEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLV+DGGGS+R A++ A +N W GI+V G IR + E+ +IG+ ALA P+
Sbjct: 58 GRVLVIDGGGSIRRALIDAELARLAADNHWEGIIVYGAIRQLSELENIEIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 SADESNYGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|398797327|ref|ZP_10556650.1| regulator of ribonuclease activity A [Pantoea sp. GM01]
gi|398103447|gb|EJL93617.1| regulator of ribonuclease activity A [Pantoea sp. GM01]
Length = 161
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEAVNVVEPLFSNFGGRSSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIV+ G +R VD++ +IG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAQLASLAAQNEWEGIVIYGSVRQVDDLEELEIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|54022068|ref|YP_116310.1| ribonuclease activity regulator protein RraA [Nocardia farcinica
IFM 10152]
gi|61215828|sp|Q5Z3P5.1|RRAAH_NOCFA RecName: Full=Putative regulator of ribonuclease activity
gi|54013576|dbj|BAD54946.1| putative S-adenosylmethionine:2- demethylmenaquinone
methyltransferase [Nocardia farcinica IFM 10152]
Length = 165
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+V TA++ D + E+R+ F +G R FSG I T++ F+DN+L+++ L E G
Sbjct: 11 VVATADLADE-----IGPEIRSCDTQFIQFGGRAAFSGRITTIRCFQDNLLVKQTLGEPG 65
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G+VLVVDGG S+ A++G + +NGWAG++VNG +RD + DIG++AL ++P
Sbjct: 66 EGKVLVVDGGASVHTALVGDIIAGRGVDNGWAGVIVNGAVRDSAILRTLDIGIKALGTNP 125
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
K+ + G GE+ VP+ GG GE LY+D DGI++ RAE
Sbjct: 126 RKSTQTGSGERDVPVEFGGVTFVPGEMLYSDHDGIVV-RAE 165
>gi|452950467|gb|EME55925.1| RraA family protein [Amycolatopsis decaplanina DSM 44594]
Length = 161
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 5/155 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++ D + LR F+ +G + FSGPI T+ EDN L+++ L G+G
Sbjct: 6 TTADLVDEHGD-----RLRVCDTQFRQFGGHRKFSGPIRTVSCHEDNGLVKKLLATPGDG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLVVDGGGSL A+ G A +NGWAG+VVNG +RD E+ G +GV+AL ++P K
Sbjct: 61 AVLVVDGGGSLHSALTGDMIAKSAVDNGWAGVVVNGAVRDSAELAGLPLGVKALGTNPRK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
++K G+G VP+ GG + G+ LY+D DG+++
Sbjct: 121 SSKAGVGAVDVPVGFGGVTFTPGDTLYSDDDGVVV 155
>gi|228992053|ref|ZP_04151989.1| Regulator of ribonuclease activity A [Bacillus pseudomycoides DSM
12442]
gi|228767782|gb|EEM16409.1| Regulator of ribonuclease activity A [Bacillus pseudomycoides DSM
12442]
Length = 169
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 97/156 (62%), Gaps = 5/156 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA G+++ +PIFQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 12 TTDLCDA-----FEGDVQVCKPIFQSYGKKERFHGKIATVKVKDDNVLVKEALQTLPEGT 66
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+V GC+RD E+ +IG+ AL + P ++
Sbjct: 67 VLVVDGGSSTNCALLGDNLANIAKERNIAGIIVYGCVRDSKELRNINIGILALGTMPKRS 126
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K+G GE +P+ G +++YAD DGI++ +
Sbjct: 127 RKEGKGETEIPLQFGEIEWIPNQYVYADEDGIIVCK 162
>gi|253991725|ref|YP_003043081.1| regulator of ribonuclease activity a [Photorhabdus asymbiotica]
gi|211638500|emb|CAR67121.1| regulator of ribonuclease activity a [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253783175|emb|CAQ86340.1| regulator of ribonuclease activity a [Photorhabdus asymbiotica]
Length = 169
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LEE G+GR
Sbjct: 5 TSELCD-----IYQEEVNVVEPMFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEENGHGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W GIVV G +R VD++ D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRQALIDAELAQLAMQNEWEGIVVYGAVRQVDQLAELDLGIQAIAAIPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G G + + GG G++LYAD GI++S L +
Sbjct: 120 RDEGTGASDIRVNFGGVTFFSGDYLYADNTGIILSEEPLGL 160
>gi|212712513|ref|ZP_03320641.1| hypothetical protein PROVALCAL_03608 [Providencia alcalifaciens DSM
30120]
gi|422020352|ref|ZP_16366891.1| ribonuclease activity regulator protein RraA [Providencia
alcalifaciens Dmel2]
gi|212684729|gb|EEB44257.1| hypothetical protein PROVALCAL_03608 [Providencia alcalifaciens DSM
30120]
gi|414101488|gb|EKT63087.1| ribonuclease activity regulator protein RraA [Providencia
alcalifaciens Dmel2]
Length = 172
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I+T+K FEDN ++ + LEE G+GR
Sbjct: 5 TSELCD-----IYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGILYDLLEEDGHGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +NGW GIVV G +R VD + D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALIDAELARLAVDNGWEGIVVYGAVRQVDALMELDLGIQAVAAIPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G+GE + + GG G++LYAD G+++S L+
Sbjct: 120 PDEGVGESDIRVNFGGVTFFSGDYLYADNTGMILSEEPLT 159
>gi|283834703|ref|ZP_06354444.1| hypothetical protein CIT292_08921 [Citrobacter youngae ATCC 29220]
gi|365101123|ref|ZP_09331830.1| RraA family protein [Citrobacter freundii 4_7_47CFAA]
gi|291069629|gb|EFE07738.1| regulator of ribonuclease activity A [Citrobacter youngae ATCC
29220]
gi|363647570|gb|EHL86784.1| RraA family protein [Citrobacter freundii 4_7_47CFAA]
Length = 161
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 ILLVDGGGSVRRALVDAELARLAVQNEWEGLVIYGSVRQVDDLGELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 SGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|440289713|ref|YP_007342478.1| regulator of ribonuclease activity A [Enterobacteriaceae bacterium
strain FGI 57]
gi|440049235|gb|AGB80293.1| regulator of ribonuclease activity A [Enterobacteriaceae bacterium
strain FGI 57]
Length = 161
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRLSFGGQITTVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 ILLVDGGGSVRRALIDAELARIATQNEWEGIVVYGAVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|91791827|ref|YP_561478.1| ribonuclease activity regulator protein RraA [Shewanella
denitrificans OS217]
gi|123061300|sp|Q12S21.1|RRAA_SHEDO RecName: Full=Regulator of ribonuclease activity A
gi|91713829|gb|ABE53755.1| Protein of unknown function 1935 [Shewanella denitrificans OS217]
Length = 161
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI + L+E G G
Sbjct: 4 NTSELCDMYIDVV-----DVVEPMFSNYGGCSSFGGAISTVKCFEDNGLIADALQEDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A++ + A NN W GI+V G +RDVD + D+G++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALIDASIAQIAVNNNWEGIIVYGSVRDVDALEELDLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A G+GE +P+ GG G+ +YAD G+++S L +
Sbjct: 119 AEGNGVGEIELPVNFGGVTFLPGDHIYADNTGVILSPEPLDI 160
>gi|359419883|ref|ZP_09211829.1| regulator of ribonuclease activity A [Gordonia araii NBRC 100433]
gi|358244253|dbj|GAB09898.1| regulator of ribonuclease activity A [Gordonia araii NBRC 100433]
Length = 164
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 98/157 (62%), Gaps = 5/157 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
V TA++ D + ++R+ F+ +G+R+ F G + T++ F+DN L++E L E
Sbjct: 8 FVPTADLVDQ-----IGSDVRSCDTQFRRFGQRETFVGKVTTVRCFQDNALLKEVLGEDN 62
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G VLV+DG S+ A++G +A+ +GW G+VVNG IRD I+G DIGV+AL ++P
Sbjct: 63 PGGVLVIDGDASVHTALVGDLIAERARTHGWVGLVVNGAIRDAATIDGMDIGVKALGTNP 122
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ K G GE+ VP+ GG G+ LY+D DGI++
Sbjct: 123 RKSTKSGAGERDVPVEFGGVTFRPGDTLYSDADGIVL 159
>gi|422006999|ref|ZP_16353987.1| ribonuclease activity regulator protein RraA [Providencia rettgeri
Dmel1]
gi|414098190|gb|EKT59840.1| ribonuclease activity regulator protein RraA [Providencia rettgeri
Dmel1]
Length = 174
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEEDGTGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD + D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALIDAEIARLAVDNHWEGIVVYGAVRQVDALMELDLGIQAIAAMPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+GIGE + + GG G++LYAD GI++S L
Sbjct: 120 PDEGIGESDIRVNFGGVTFFSGDYLYADNTGIILSEEPL 158
>gi|309811886|ref|ZP_07705659.1| regulator of ribonuclease activity A [Dermacoccus sp. Ellin185]
gi|308434175|gb|EFP58034.1| regulator of ribonuclease activity A [Dermacoccus sp. Ellin185]
Length = 165
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA + TA++ D + L + F YG R F+G IVT+K F DN +++E L
Sbjct: 1 MADIATADLYDE-----LGDALDSCSTQFTQYGGRARFNGTIVTIKCFRDNQIVKETLNS 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDG G++ A++G A NGW G+++NG IRD + D+G +AL +
Sbjct: 56 PGAGKVLVVDGDGNVESALMGDMIAEAAVANGWEGVIINGAIRDSAAVAKLDLGTKALGT 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+P K+ K G GEK VP+T GG + G+ L++D DGI+++ AE
Sbjct: 116 NPRKSAKDGKGEKDVPVTFGGATFTPGDHLWSDEDGIVVTSAE 158
>gi|331685669|ref|ZP_08386252.1| regulator of ribonuclease activity A [Escherichia coli H299]
gi|450196016|ref|ZP_21892742.1| ribonuclease activity regulator protein RraA [Escherichia coli
SEPT362]
gi|331077140|gb|EGI48355.1| regulator of ribonuclease activity A [Escherichia coli H299]
gi|449315823|gb|EMD05953.1| ribonuclease activity regulator protein RraA [Escherichia coli
SEPT362]
Length = 161
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LY D GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYTDNTGIILSEDPLDI 160
>gi|375110776|ref|ZP_09756995.1| ribonuclease activity regulator protein RraA [Alishewanella
jeotgali KCTC 22429]
gi|374569165|gb|EHR40329.1| ribonuclease activity regulator protein RraA [Alishewanella
jeotgali KCTC 22429]
Length = 161
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD + + ++ ++PIF YG R+ F G I T+K FEDN LIR+ L + G G
Sbjct: 4 NTSELCD-----LYADQVDVVEPIFANYGGRRSFGGQIHTVKCFEDNGLIRQVLADNGIG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL++DGGGS R A++ A NGW GIV G +RD+D + DIG++A+ + P+
Sbjct: 59 KVLLIDGGGSARRALIDAELASLAATNGWEGIVCYGSVRDLDALEDFDIGIQAVNAIPIG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ G GE VP+ G G+ LYAD+ GI++S L +
Sbjct: 119 ADDNGFGETEVPVNFAGVTFLPGDHLYADSTGIILSPDALDL 160
>gi|54307472|ref|YP_128492.1| ribonuclease activity regulator protein RraA [Photobacterium
profundum SS9]
gi|61216078|sp|Q6LVI5.1|RRAA_PHOPR RecName: Full=Regulator of ribonuclease activity A
gi|46911892|emb|CAG18690.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Photobacterium profundum SS9]
Length = 161
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 103/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F YG R F G I T+K FEDN L+R L++ G GR
Sbjct: 5 TSELCD-----IYLDQVDVIEPMFNSYGGRSSFGGQITTVKCFEDNALLRTVLQQPGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ + + A N W G++V G +R+VD+++ +IG++A+AS P+ A
Sbjct: 60 VLLVDGGGSLRRALIDADIALLATENEWEGLIVYGSVRNVDDLDELEIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+++G+G+ + + GG + +YAD G+++S L +
Sbjct: 120 DQQGVGDVDIAVNFGGVTFLPEDHIYADNTGVILSPEPLDI 160
>gi|393764129|ref|ZP_10352741.1| ribonuclease activity regulator protein RraA [Alishewanella agri
BL06]
gi|392604759|gb|EIW87658.1| ribonuclease activity regulator protein RraA [Alishewanella agri
BL06]
Length = 161
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD + + ++ ++PIF YG R+ F G I T+K FEDN L+R+ L + G G
Sbjct: 4 NTSELCD-----LYADQVDVVEPIFANYGGRRSFGGQIHTVKCFEDNGLVRQVLADSGIG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL++DGGGS R A++ A NGW GIV G +RD+D + DIG++A+ + P+
Sbjct: 59 KVLLIDGGGSSRRALIDAELASLAATNGWEGIVCYGSVRDLDALEDFDIGIQAVNAIPIG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ G GE VP+ G G+ LYAD+ GI++S L +
Sbjct: 119 ADDNGFGETEVPVNFAGVTFLPGDHLYADSTGIILSPEALDI 160
>gi|442596378|ref|ZP_21014190.1| Ribonuclease E inhibitor RraA [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|441655231|emb|CCQ00103.1| Ribonuclease E inhibitor RraA [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
Length = 161
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ D G++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDTGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|330830540|ref|YP_004393492.1| ribonuclease activity regulator protein RraA [Aeromonas veronii
B565]
gi|423208785|ref|ZP_17195339.1| RraA family protein [Aeromonas veronii AER397]
gi|328805676|gb|AEB50875.1| Ribonuclease activity regulator protein RraA [Aeromonas veronii
B565]
gi|404618630|gb|EKB15550.1| RraA family protein [Aeromonas veronii AER397]
Length = 159
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 100/157 (63%), Gaps = 5/157 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD + L L+ P+FQ +G + +F G VTL +EDN L+R + G+G+V+
Sbjct: 7 DLCDQHGDL-----LQVADPVFQDFGGKALFYGRAVTLSCYEDNSLVRGLVTRPGHGKVM 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
V+DGGGSLR A+LG V+A + GW GI+++G RDV + +GV+ALA+ P+K K
Sbjct: 62 VIDGGGSLRRALLGDQLAVKAVDQGWEGILIHGAARDVGTLATLALGVKALAACPVKTEK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+G+GE ++ G I +G+++YAD +G+++S L
Sbjct: 122 RGLGELGAVVSFAGVTIHEGDYVYADRNGVVVSATPL 158
>gi|392310509|ref|ZP_10273043.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
citrea NCIMB 1889]
Length = 167
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 5/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G + FSG I T+K FE+N LIR L + G+
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGKTAFSGRIQTVKCFENNELIRSMLGQDGSD 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+L++DGGGS R A++ + A N W GI+V G +R VDE+ C IG++A+ S P+
Sbjct: 59 SILLIDGGGSTRRALIDIDLAELAVENNWQGIIVYGAVRHVDELEECSIGIQAITSIPVS 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
A+ G GE+ +P+ G D ++LYAD+ GI+IS EL
Sbjct: 119 ADSSGAGEQGIPVNFAGVSFFDDDYLYADSTGIIISAEEL 158
>gi|423720135|ref|ZP_17694317.1| ribonuclease activity regulator protein rraA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366897|gb|EID44182.1| ribonuclease activity regulator protein rraA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 159
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD EL+ Q Q YG + FSGPI T+ V EDNVL+RE LE
Sbjct: 1 MKTADLCDE-----FLSELQVCQLPMQSYGGKAEFSGPIATVDVLEDNVLVREALETVPA 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG GS CA+LG A + G AG++V+GCIRD EI IGV A+ + P+
Sbjct: 56 GTVLVVDGKGSRNCALLGDRLAQIACDRGLAGVIVHGCIRDSAEIANMPIGVMAIGTCPV 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K+G G++ V + GG G ++YAD DGI++++ +L
Sbjct: 116 KSKKEGKGKRDVALEFGGVLWEPGAYVYADRDGIVLAKTDL 156
>gi|395230241|ref|ZP_10408547.1| ribonuclease activity regulator protein RraA [Citrobacter sp. A1]
gi|420367973|ref|ZP_14868747.1| regulator of ribonuclease activity A [Shigella flexneri 1235-66]
gi|421846821|ref|ZP_16279966.1| ribonuclease activity regulator protein RraA [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|424730941|ref|ZP_18159533.1| ribonuclease activity regulator protein [Citrobacter sp. L17]
gi|391322654|gb|EIQ79328.1| regulator of ribonuclease activity A [Shigella flexneri 1235-66]
gi|394716171|gb|EJF21940.1| ribonuclease activity regulator protein RraA [Citrobacter sp. A1]
gi|411771913|gb|EKS55568.1| ribonuclease activity regulator protein RraA [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|422894654|gb|EKU34463.1| ribonuclease activity regulator protein [Citrobacter sp. L17]
gi|455641092|gb|EMF20289.1| ribonuclease activity regulator protein RraA [Citrobacter freundii
GTC 09479]
Length = 161
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 ILLVDGGGSVRRALVDAELARLAVQNEWEGLVIYGSVRQVDDLEELDIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|238760317|ref|ZP_04621459.1| Regulator of ribonuclease activity A protein 2 [Yersinia aldovae
ATCC 35236]
gi|238701445|gb|EEP94020.1| Regulator of ribonuclease activity A protein 2 [Yersinia aldovae
ATCC 35236]
Length = 161
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+++CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSDLCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEEDGLGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A ++ W GIVV G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALIDAELAQLALDHNWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LY D GI++S L +
Sbjct: 120 ADEGVGESDIRVNFGGVTFFSGDHLYVDNTGIILSEEPLDI 160
>gi|297530027|ref|YP_003671302.1| regulator of ribonuclease activity A [Geobacillus sp. C56-T3]
gi|297253279|gb|ADI26725.1| regulator of ribonuclease activity A [Geobacillus sp. C56-T3]
Length = 161
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 101/158 (63%), Gaps = 5/158 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD Q + EL+ + FQ YG +++F GPI T+ VFEDNVL+RE LE
Sbjct: 1 MKTADLCD---QFL--DELQVCELPFQSYGGKRMFFGPIATVDVFEDNVLVREALETVPP 55
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDG GS R A+LG A + G AG++++GCIRD EI +GV A+ + P+
Sbjct: 56 GTVLVVDGKGSRRVALLGDRLAQIACDRGLAGVIIHGCIRDSAEIGRMPLGVMAIGTCPV 115
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K+ K+G G + V + GG R G ++YAD DG++++R
Sbjct: 116 KSKKEGKGARDVVLEFGGVRWEPGAYVYADADGVVVAR 153
>gi|317507689|ref|ZP_07965396.1| RraA family protein [Segniliparus rugosus ATCC BAA-974]
gi|316254016|gb|EFV13379.1| RraA family protein [Segniliparus rugosus ATCC BAA-974]
Length = 160
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ TA++ D + ++R+ F+ YG R F GP+ T++ F+DN LI+ L G
Sbjct: 6 FIPTADLVDQ-----IGDQVRSCDTQFRQYGGRLQFVGPVRTIRAFQDNALIKATLSTPG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G VLVVDG S+ A++G AQ+NGWAG+V+NG +RDV + G D+G++AL S+P
Sbjct: 61 EGAVLVVDGSASVHTALVGDVIAKLAQDNGWAGLVLNGAVRDVAALAGLDLGIKALGSNP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K+ K G GE VP+ GG + G+ L++D DGI+++
Sbjct: 121 RKSGKTGAGELDVPVEFGGVVFNPGDLLHSDEDGIVLTE 159
>gi|444432412|ref|ZP_21227567.1| ribonuclease regulator [Gordonia soli NBRC 108243]
gi|443886760|dbj|GAC69288.1| ribonuclease regulator [Gordonia soli NBRC 108243]
Length = 162
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 92/143 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R++ F YG R+ F G + T+K F+DN L++ L E G VLVVDG S+ A++
Sbjct: 19 DVRSVDTQFTQYGGRREFVGRVTTVKCFQDNALLKSVLGESNPGGVLVVDGDASVHTALV 78
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G ++NGWAGIVVNG IRD I G +IGV+AL ++P K+ K G GE+ +P+TIG
Sbjct: 79 GDIIAELGRSNGWAGIVVNGAIRDAATIGGMEIGVKALGTNPRKSTKTGAGERDIPLTIG 138
Query: 141 GTRISDGEWLYADTDGILISRAE 163
G + G+ LY+D DGI++ E
Sbjct: 139 GETFTPGDLLYSDDDGIVLVAQE 161
>gi|167855725|ref|ZP_02478481.1| ribonuclease activity regulator protein RraA [Haemophilus parasuis
29755]
gi|219871842|ref|YP_002476217.1| ribonuclease activity regulator protein RraA [Haemophilus parasuis
SH0165]
gi|254809478|sp|B8F7G7.1|RRAA_HAEPS RecName: Full=Regulator of ribonuclease activity A
gi|167853181|gb|EDS24439.1| ribonuclease activity regulator protein RraA [Haemophilus parasuis
29755]
gi|219692046|gb|ACL33269.1| ribonuclease activity regulator protein RraA [Haemophilus parasuis
SH0165]
Length = 166
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T+E+CD I S ++ ++PIF +G F G I T+K FE N LI E LEE+G
Sbjct: 3 VDTSELCD-----IYSDQVDVVEPIFSSFGGLSSFYGKITTVKCFESNGLIAEVLEEEGQ 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG +R A++ A +NGW GI+VNG +R +D + DIG++ALA P+
Sbjct: 58 GRVLLVDGGGVVRRALIDAELAQLAVDNGWEGIIVNGAVRQLDVLETLDIGIQALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ +GE P+ GG +++YAD GI++S
Sbjct: 118 GADDSMVGEVDTPVNFGGVTFLPEDYVYADLTGIVLS 154
>gi|386823267|ref|ZP_10110420.1| ribonuclease activity regulator protein RraA [Serratia plymuthica
PRI-2C]
gi|386379828|gb|EIJ20612.1| ribonuclease activity regulator protein RraA [Serratia plymuthica
PRI-2C]
Length = 161
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + L+E G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLDENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P A
Sbjct: 60 VLLIDGGGSVRRALINAELARLATLNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI++S L +
Sbjct: 120 ISEGVGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|82778895|ref|YP_405244.1| ribonuclease activity regulator protein RraA [Shigella dysenteriae
Sd197]
gi|123561280|sp|Q32AA2.1|RRAA_SHIDS RecName: Full=Regulator of ribonuclease activity A
gi|81243043|gb|ABB63753.1| menaquinone biosynthesis protein [Shigella dysenteriae Sd197]
Length = 161
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G + VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVHQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|296166983|ref|ZP_06849397.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897663|gb|EFG77255.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 159
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 92/141 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G R F+GPI T++ FEDN L++ L + G VLVVDGG SL A++
Sbjct: 18 DVRSCDVQFRQFGGRPEFAGPISTVRCFEDNALLKSVLSQPSAGGVLVVDGGASLHSALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++NGWAG+VVNG +RD + G DIG++AL ++P K+ K G GE+ + +T+G
Sbjct: 78 GDVIAELARSNGWAGLVVNGAVRDAAALRGLDIGIKALGTNPRKSTKTGAGERDIEVTLG 137
Query: 141 GTRISDGEWLYADTDGILISR 161
G GE Y+D DGI++ +
Sbjct: 138 GVTFVPGEIAYSDDDGIVVVK 158
>gi|374620438|ref|ZP_09692972.1| RraA family protein [gamma proteobacterium HIMB55]
gi|374303665|gb|EHQ57849.1| RraA family protein [gamma proteobacterium HIMB55]
Length = 159
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 6/163 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+++T ++ D NP+ +AL F+ +GR F G + T++ FEDN +++E + E G
Sbjct: 1 MLSTPDLSDLNPRA------QALPFQFRTFGRVAAFGGQVATIRCFEDNSMVKEAVNEPG 54
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
+GRVL++DGG SL A+ G A +NGW G+V+ G RDV+ IN D GV+AL + P
Sbjct: 55 HGRVLLIDGGVSLAKALTGDMVAKSAMDNGWVGMVIIGAARDVEVINTFDFGVKALGTSP 114
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+K K G GE+ V + +GG + DG +L AD +G+L+ S
Sbjct: 115 IKTEKLGAGERGVTLNLGGVEVQDGHFLAADENGVLVLDGPFS 157
>gi|145299953|ref|YP_001142794.1| ribonuclease activity regulator protein RraA [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852725|gb|ABO91046.1| ribonuclease activity regulator protein RraA [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 160
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M L ++CD + L+ P+F +G + +F G VTL +EDN L+RE +
Sbjct: 1 MMLDLLPDLCDQH-----GDALQVADPLFHDFGGKPLFYGQAVTLSCYEDNSLVRELVNR 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRV+V+DGGGSLR A+LG ++A GW GIV+ G +RDV + +GV+ALA+
Sbjct: 56 PGQGRVMVIDGGGSLRRALLGDQLAIKAAEQGWEGIVIFGAVRDVGTLATLALGVKALAA 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P+K K G GE ++ G I G+++YAD +G+L+S L
Sbjct: 116 CPVKTEKLGQGELDAVVSFAGVTIHPGDYVYADLNGVLVSATRL 159
>gi|157963602|ref|YP_001503636.1| ribonuclease activity regulator protein RraA [Shewanella pealeana
ATCC 700345]
gi|157848602|gb|ABV89101.1| Ribonuclease E inhibitor RraA [Shewanella pealeana ATCC 700345]
Length = 161
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI + ++E G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNYGGSNSFGGSISTIKCFEDNGLIIDAVQEDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL++DGGGSLR A+L A N W GI+V G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLIDGGGSLRRALLDARIAEVAVANNWEGIIVYGTVRDVDALEDLDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 119 ADSNAVGELEIPVNFGGVTFLPGDHVYADNTGIILSPEPLDI 160
>gi|110807790|ref|YP_691310.1| ribonuclease activity regulator protein RraA [Shigella flexneri 5
str. 8401]
gi|424840163|ref|ZP_18264800.1| ribonuclease activity regulator protein RraA [Shigella flexneri 5a
str. M90T]
gi|123342248|sp|Q0SY60.1|RRAA_SHIF8 RecName: Full=Regulator of ribonuclease activity A
gi|110617338|gb|ABF06005.1| menaquinone biosynthesis, unknown [Shigella flexneri 5 str. 8401]
gi|383469215|gb|EID64236.1| ribonuclease activity regulator protein RraA [Shigella flexneri 5a
str. M90T]
Length = 161
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGESIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|383933715|ref|ZP_09987159.1| regulator of ribonuclease activity A protein 2 [Rheinheimera
nanhaiensis E407-8]
gi|383705321|dbj|GAB57250.1| regulator of ribonuclease activity A protein 2 [Rheinheimera
nanhaiensis E407-8]
Length = 161
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD L+ ++P+F YG R+ F G I T+K FEDN L+R+ L + G G
Sbjct: 4 NTSELCDLYADLV-----DVVEPLFANYGGRRSFGGQIHTVKCFEDNGLVRQMLNDPGVG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL++D GGS R AI+ A NGW GIV G +RD+D + DIG++A+ + P+
Sbjct: 59 KVLLIDAGGSARRAIIDAELASLAATNGWEGIVCYGSVRDLDLLEDFDIGIQAVNAIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ KG GE VP+ G G+ LYAD+ GI++S L +
Sbjct: 119 ADDKGFGETEVPVNFAGVTFLPGDHLYADSTGIIMSPDPLDI 160
>gi|379706332|ref|YP_005261537.1| Regulator of ribonuclease activity A [Nocardia cyriacigeorgica
GUH-2]
gi|374843831|emb|CCF60893.1| Regulator of ribonuclease activity A [Nocardia cyriacigeorgica
GUH-2]
Length = 162
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+V TA++ D + E+R+ F +G R FSG I T++ F+DN+L+++ L E G
Sbjct: 7 VVATADLADE-----IGPEIRSCDTQFIQFGGRAAFSGRITTIRCFQDNLLVKQTLSEPG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G+VLVVDGG S+ A++G + +NGWAG++VNG +RD + DIG++AL ++P
Sbjct: 62 EGKVLVVDGGASVHTALVGDIIAGRGVDNGWAGVIVNGAVRDSAILRTLDIGIKALGTNP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
K+ + G G+K VP+ GG G+ LY+D DG+++ RAE
Sbjct: 122 RKSTQTGSGDKDVPVEFGGVTFVPGDMLYSDHDGVVV-RAE 161
>gi|419845356|ref|ZP_14368629.1| regulator of ribonuclease activity A [Haemophilus parainfluenzae
HK2019]
gi|386415832|gb|EIJ30352.1| regulator of ribonuclease activity A [Haemophilus parainfluenzae
HK2019]
Length = 166
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I + ++ ++PIF +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYADQVDVVEPIFSSFGGVSNFYGKVTTVKCFENNGLIAELLEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGG++R A++ A +N WAGI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLVVDGGGAVRRALIDAELAQLAADNDWAGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADENNHGESDLPVNFGGVTFFPEDYIYADLTGIILSQEALDL 160
>gi|322515340|ref|ZP_08068336.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Actinobacillus ureae ATCC 25976]
gi|322118627|gb|EFX90849.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Actinobacillus ureae ATCC 25976]
Length = 165
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE+N LI E LEE+GN
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGASSFYGKITTVKCFENNGLIAEVLEEEGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ IGE P+ GG +++YAD GI++S
Sbjct: 118 GADDTDIGEVDTPVNFGGVTFFPEDYVYADLTGIILS 154
>gi|392553602|ref|ZP_10300739.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
spongiae UST010723-006]
Length = 166
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+++CD + + L+P+F + F+G I T+K FE+N LIRE L + G+
Sbjct: 3 INTSDLCDQ-----FADSIDVLEPLFVNFAGATAFAGQITTIKCFENNQLIRETLSQDGS 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G+VL++DGGGS R A++ A +N W G+VV G +R V ++ DIG++A+AS P+
Sbjct: 58 GKVLLIDGGGSTRRALIDIELAELALDNNWEGLVVYGSVRHVSDLEELDIGIQAVASIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +G GE P+ G +G+++YAD+ GI++S ELS+
Sbjct: 118 AADSEGYGELGAPVNFAGVSFFEGDYIYADSTGIILSAEELSI 160
>gi|365156338|ref|ZP_09352658.1| RraA family protein [Bacillus smithii 7_3_47FAA]
gi|363627433|gb|EHL78331.1| RraA family protein [Bacillus smithii 7_3_47FAA]
Length = 174
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL+A + F YG+++ FSGPI T+KVFEDNVL++E L+ G VLVVDG GS CA+L
Sbjct: 30 ELQACKLAFHSYGKKKRFSGPIATVKVFEDNVLVKEALQSVPKGSVLVVDGDGSRNCALL 89
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G AQN AG+++NGC RD ++ +IGV A+ S P+K+ K+G GE+ + + G
Sbjct: 90 GDRLGEIAQNRELAGVIINGCARDTADLAELEIGVLAIGSIPVKSKKEGKGERDIVLHFG 149
Query: 141 GTRISDGEWLYADTDGILIS 160
G ++YAD DG+++S
Sbjct: 150 EVEWVPGHYVYADEDGVVLS 169
>gi|325579224|ref|ZP_08149180.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Haemophilus parainfluenzae ATCC 33392]
gi|325159459|gb|EGC71593.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Haemophilus parainfluenzae ATCC 33392]
Length = 166
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I + ++ ++PIF +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYADQVDVVEPIFSSFGGVSNFYGKVTTVKCFENNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGG++R A++ A +N WAGI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLVVDGGGAVRRALIDAELAQLAADNDWAGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADENNQGESDLPVNFGGVTFFPEDYIYADLTGIILSQEALDL 160
>gi|54307754|ref|YP_128774.1| ribonuclease activity regulator protein RraA [Photobacterium
profundum SS9]
gi|90413160|ref|ZP_01221156.1| ribonuclease activity regulator protein RraA [Photobacterium
profundum 3TCK]
gi|61216077|sp|Q6LUQ3.1|RRAAH_PHOPR RecName: Full=Putative regulator of ribonuclease activity
gi|46912177|emb|CAG18972.1| putative s-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Photobacterium profundum SS9]
gi|90325851|gb|EAS42303.1| ribonuclease activity regulator protein RraA [Photobacterium
profundum 3TCK]
Length = 163
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CD Q ++R L + YG +++F G +VTL+ FEDN L+R+ + + G G+VL
Sbjct: 7 DLCDHYEQ-----DVRWLPLVLNDYGGKKIFYGEVVTLRCFEDNSLVRDIVSQDGTGKVL 61
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
+DG S A+LG + A NGW GIV+NG RDV + D+GV+AL + P K K
Sbjct: 62 FIDGHASYNGALLGDQLALLAVKNGWQGIVINGTARDVGTLATLDLGVKALGTCPYKTVK 121
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ G+ +V +T+ T I G++LYAD +GIL+S+ L +
Sbjct: 122 RQTGDMNVTMTVAHTMIYPGDYLYADLNGILLSKQSLDL 160
>gi|229005601|ref|ZP_04163306.1| Regulator of ribonuclease activity A [Bacillus mycoides Rock1-4]
gi|228755633|gb|EEM04973.1| Regulator of ribonuclease activity A [Bacillus mycoides Rock1-4]
Length = 169
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 96/154 (62%), Gaps = 5/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA G+++ +PIFQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 12 TTDLCDA-----FEGDVQVCKPIFQSYGKKERFHGKIATVKVKDDNVLVKEALQTLPEGT 66
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+V GC+RD E+ +IG+ AL + P ++
Sbjct: 67 VLVVDGGSSTNCALLGDNLANIAKERNIAGIIVYGCVRDSRELRNINIGILALGTMPKRS 126
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+G GE +P+ G +++YAD DGI++
Sbjct: 127 RKEGKGETEIPLQFGEIEWIPNQYVYADEDGIIV 160
>gi|453078458|ref|ZP_21981189.1| ribonuclease activity regulator protein RraA [Rhodococcus triatomae
BKS 15-14]
gi|452757214|gb|EME15621.1| ribonuclease activity regulator protein RraA [Rhodococcus triatomae
BKS 15-14]
Length = 159
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 1/158 (0%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T +V A+ + ++R+ F +G VFSG I T+K F+DN+L+++ L E GNG
Sbjct: 2 TEQVATADLADEIGPDIRSCDTQFIQFGGHAVFSGRITTIKCFQDNLLVKQTLSEPGNGG 61
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS+ A++G + +NGWAG++VNG +RD + IGV+AL ++P K+
Sbjct: 62 VLVVDGDGSVHTALVGDIIGGRGVDNGWAGVIVNGAVRDSAILRTLAIGVKALGTNPRKS 121
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+ G GEK+VP+T GG + GE +Y+D DG+++ RAE
Sbjct: 122 TQTGSGEKNVPVTFGGVTFNPGEMVYSDHDGVVV-RAE 158
>gi|152972724|ref|YP_001337870.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206578452|ref|YP_002241202.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
342]
gi|238892332|ref|YP_002917066.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|262041699|ref|ZP_06014891.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288937838|ref|YP_003441897.1| regulator of ribonuclease activity A [Klebsiella variicola At-22]
gi|290513064|ref|ZP_06552427.1| ribonuclease activity A regulator [Klebsiella sp. 1_1_55]
gi|330004460|ref|ZP_08304954.1| regulator of ribonuclease activity A [Klebsiella sp. MS 92-3]
gi|365144448|ref|ZP_09348711.1| RraA family protein [Klebsiella sp. 4_1_44FAA]
gi|386037356|ref|YP_005957269.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
KCTC 2242]
gi|419975249|ref|ZP_14490661.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419981118|ref|ZP_14496397.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419986338|ref|ZP_14501471.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419992043|ref|ZP_14507003.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419998338|ref|ZP_14513126.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420004227|ref|ZP_14518866.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420009972|ref|ZP_14524450.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420016131|ref|ZP_14530426.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420021493|ref|ZP_14535672.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420027017|ref|ZP_14541014.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420032936|ref|ZP_14546746.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420038515|ref|ZP_14552161.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420044522|ref|ZP_14558001.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420050475|ref|ZP_14563774.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420055863|ref|ZP_14569026.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420060693|ref|ZP_14573690.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420067404|ref|ZP_14580197.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420074280|ref|ZP_14586892.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420078587|ref|ZP_14591043.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420083473|ref|ZP_14595754.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421918003|ref|ZP_16347543.1| Ribonuclease E inhibitor RraA [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424833183|ref|ZP_18257911.1| regulator of ribonuclease activity A [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424930975|ref|ZP_18349347.1| Regulator of ribonuclease activity A [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425079063|ref|ZP_18482165.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425083980|ref|ZP_18487077.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425084710|ref|ZP_18487803.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425095057|ref|ZP_18498137.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428152597|ref|ZP_19000256.1| Ribonuclease E inhibitor RraA [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428932265|ref|ZP_19005846.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
JHCK1]
gi|428938708|ref|ZP_19011831.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
VA360]
gi|449047086|ref|ZP_21730678.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
hvKP1]
gi|166230387|sp|A6TGB9.1|RRAA_KLEP7 RecName: Full=Regulator of ribonuclease activity A
gi|226703227|sp|B5XZ39.1|RRAA_KLEP3 RecName: Full=Regulator of ribonuclease activity A
gi|150957573|gb|ABR79603.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206567510|gb|ACI09286.1| regulator of ribonuclease activity A [Klebsiella pneumoniae 342]
gi|238544648|dbj|BAH60999.1| ribonuclease activity regulator protein [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259040961|gb|EEW42040.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288892547|gb|ADC60865.1| regulator of ribonuclease activity A [Klebsiella variicola At-22]
gi|289774446|gb|EFD82451.1| ribonuclease activity A regulator [Klebsiella sp. 1_1_55]
gi|328536618|gb|EGF62945.1| regulator of ribonuclease activity A [Klebsiella sp. MS 92-3]
gi|339764484|gb|AEK00705.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
KCTC 2242]
gi|363648239|gb|EHL87422.1| RraA family protein [Klebsiella sp. 4_1_44FAA]
gi|397343492|gb|EJJ36637.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397344078|gb|EJJ37216.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397348322|gb|EJJ41423.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397360513|gb|EJJ53189.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397362016|gb|EJJ54671.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397366406|gb|EJJ59023.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397375454|gb|EJJ67745.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397379892|gb|EJJ72082.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397386678|gb|EJJ78747.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397394134|gb|EJJ85870.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397396210|gb|EJJ87904.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397404219|gb|EJJ95739.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397411149|gb|EJK02413.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397411636|gb|EJK02886.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397421283|gb|EJK12308.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397428217|gb|EJK18963.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397432938|gb|EJK23593.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397436117|gb|EJK26717.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397444713|gb|EJK34980.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397451187|gb|EJK41276.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|405589062|gb|EKB62650.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405597900|gb|EKB71148.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405608713|gb|EKB81652.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405609261|gb|EKB82141.1| RraA family protein [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407805162|gb|EKF76413.1| Regulator of ribonuclease activity A [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410119705|emb|CCM90168.1| Ribonuclease E inhibitor RraA [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414710633|emb|CCN32337.1| regulator of ribonuclease activity A [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305202|gb|EKV67329.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
VA360]
gi|426307251|gb|EKV69336.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
JHCK1]
gi|427537462|emb|CCM96394.1| Ribonuclease E inhibitor RraA [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|448877544|gb|EMB12507.1| ribonuclease activity regulator protein RraA [Klebsiella pneumoniae
hvKP1]
Length = 161
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G G
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGS+R A++ + A N W G+VV G +R VD++ DIG++ALA+ P+ A
Sbjct: 60 ILLIDGGGSVRRALIDADLARLAVQNEWEGLVVYGAVRQVDDLEELDIGIQALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD G+++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGMILSEDPLDI 160
>gi|381211327|ref|ZP_09918398.1| ribonuclease activity regulator protein RraA [Lentibacillus sp.
Grbi]
gi|381211409|ref|ZP_09918480.1| ribonuclease activity regulator protein RraA [Lentibacillus sp.
Grbi]
Length = 159
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD S EL F YG ++ F+GPI T+KV EDNVL+RE LE G
Sbjct: 5 TTDLCDD-----YSKELAICNQPFISYGMKKAFAGPISTVKVREDNVLVRESLETIPEGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGG S CA+LG ++ AG+++ GCIRD +I D+G+ AL ++P+K+
Sbjct: 60 ILIVDGGASRNCALLGDRLASIIKDRNLAGVIIYGCIRDSADIAQMDVGLLALGTNPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
NK G GEK + +T G G + YAD DGI+IS +L
Sbjct: 120 NKNGEGEKDITLTFGEVEWEPGNFAYADEDGIVISERKL 158
>gi|443629701|ref|ZP_21114017.1| hypothetical protein STVIR_7922 [Streptomyces viridochromogenes
Tue57]
gi|443336812|gb|ELS51138.1| hypothetical protein STVIR_7922 [Streptomyces viridochromogenes
Tue57]
Length = 163
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 89/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
ELR F+ YG R+ F+GP+ T+ EDN L+R+ L G+G VLVVDG SLR A++
Sbjct: 20 ELRVCDVQFRQYGGRRAFAGPVRTVFCHEDNGLLRDLLRTPGDGHVLVVDGAASLRTALV 79
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G AQ+NGWAG+V++G +RD + G D+G++AL + P K++K G VP+TIG
Sbjct: 80 GDLIATSAQDNGWAGLVLHGAVRDSAALAGLDLGIKALGTIPRKSSKDAAGAVDVPVTIG 139
Query: 141 GTRISDGEWLYADTDGILI 159
G G+ L++D DGI +
Sbjct: 140 GITFHPGDLLHSDDDGIAL 158
>gi|432605384|ref|ZP_19841591.1| RraA family protein [Escherichia coli KTE67]
gi|431143664|gb|ELE45381.1| RraA family protein [Escherichia coli KTE67]
Length = 161
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G R
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRDR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|398796106|ref|ZP_10555734.1| regulator of ribonuclease activity A [Pantoea sp. YR343]
gi|398203958|gb|EJM90770.1| regulator of ribonuclease activity A [Pantoea sp. YR343]
Length = 161
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEAVNVVEPLFSNFGGHSSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD++ +IG++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAQLASLAAQNEWEGIVVYGSVRQVDDLEELEIGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|152966448|ref|YP_001362232.1| ribonuclease activity A regulator [Kineococcus radiotolerans
SRS30216]
gi|151360965|gb|ABS03968.1| regulator of ribonuclease activity A [Kineococcus radiotolerans
SRS30216]
Length = 170
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 5/158 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
A TTA++ D + + + S + P+ Q +G + FSG I T++ FEDN L++ L E
Sbjct: 15 APFTTADLYDEHGKRLGSCD----TPLRQ-FGAHRAFSGAIRTVRCFEDNALLKSVLSEA 69
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G+G+VLVVDG GSL A++G A NGWAG+V++G +RDV + G ++G++AL S+
Sbjct: 70 GHGQVLVVDGAGSLHTALMGDMIADIATRNGWAGVVIHGAVRDVAVLAGIELGIKALGSN 129
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
P K+ K G GEK VP+ GG + G L++D DG+++
Sbjct: 130 PRKSAKTGAGEKDVPVEFGGCTFTPGHHLWSDDDGVVV 167
>gi|317050065|ref|YP_004117713.1| ribonuclease activity A regulator [Pantoea sp. At-9b]
gi|316951682|gb|ADU71157.1| regulator of ribonuclease activity A [Pantoea sp. At-9b]
Length = 161
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSALCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VDE+ ++G++A+A+ P+ A
Sbjct: 60 VLLVDGGGSVRRALVDAEVARLAVQNEWEGIVVYGSVRQVDELEELELGIQAIAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD G+++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGMILSEDALDI 160
>gi|425733585|ref|ZP_18851905.1| ribonuclease activity regulator protein RraA [Brevibacterium casei
S18]
gi|425482025|gb|EKU49182.1| ribonuclease activity regulator protein RraA [Brevibacterium casei
S18]
Length = 155
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 5/158 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V+TA++ D EL ++ F +G + FSGP T++ FEDN L+R L G+
Sbjct: 3 VSTADLWDERGP-----ELHSIALNFTDFGDKVAFSGPARTVRCFEDNALVRSVLSGPGD 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDGGGS+ A++G A +NGW G+V+NG +RD + + D+GV+ALAS+P
Sbjct: 58 GSVLVVDGGGSIATALMGDMIAELALSNGWVGVVINGAVRDREVLATLDLGVKALASNPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K+ K G GE+ V + GG I G ++AD DG+++ R
Sbjct: 118 KSGKTGAGEQDVVVEFGGATIRPGAMVFADADGVVVER 155
>gi|183985372|ref|YP_001853663.1| ribonuclease activity regulator protein RraA [Mycobacterium marinum
M]
gi|183178698|gb|ACC43808.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase, MenG
[Mycobacterium marinum M]
Length = 165
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 93/142 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G R F+GPI T++ F+DN L++ L + G G VLV+DG GSL A++
Sbjct: 19 DVRSCDLQFRQFGGRAEFAGPISTVRCFQDNALLKSVLSQPGEGGVLVIDGAGSLHTALV 78
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++NGWAG+VV+G +RD + G DIG++AL ++P K+ K G GE+ IT+G
Sbjct: 79 GDVIAELARSNGWAGLVVHGAVRDSAALRGIDIGIKALGTNPRKSTKTGSGERDAEITLG 138
Query: 141 GTRISDGEWLYADTDGILISRA 162
G + GE Y+D DGI++ A
Sbjct: 139 GVTFAPGEIAYSDDDGIVVVAA 160
>gi|407693179|ref|YP_006817968.1| ribonuclease activity regulator protein RraA [Actinobacillus suis
H91-0380]
gi|407389236|gb|AFU19729.1| ribonuclease activity regulator protein RraA [Actinobacillus suis
H91-0380]
Length = 165
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE+N LI E LEE+GN
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGASSFYGKITTVKCFENNGLIAEVLEEEGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ IGE P+ GG +++YAD GI++S
Sbjct: 118 GADDADIGEVDTPVNFGGVTFFPEDYVYADLTGIILS 154
>gi|254821454|ref|ZP_05226455.1| ribonuclease activity regulator protein RraA [Mycobacterium
intracellulare ATCC 13950]
gi|379744905|ref|YP_005335726.1| ribonuclease activity regulator protein RraA [Mycobacterium
intracellulare ATCC 13950]
gi|379752194|ref|YP_005340866.1| ribonuclease activity regulator protein RraA [Mycobacterium
intracellulare MOTT-02]
gi|378797269|gb|AFC41405.1| ribonuclease activity regulator protein RraA [Mycobacterium
intracellulare ATCC 13950]
gi|378802410|gb|AFC46545.1| ribonuclease activity regulator protein RraA [Mycobacterium
intracellulare MOTT-02]
Length = 161
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 99/154 (64%), Gaps = 5/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D+ + ++R+ F+ G R F+GPI T++ F+DN L++ L E G+G
Sbjct: 8 TADLVDS-----IGPDVRSCDTQFRQLGGRAEFAGPISTVRCFQDNALLKSVLSEPGDGG 62
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+LV+DG GSL A++G A++NGWAG+++NG +RD + G +IG++AL ++P K+
Sbjct: 63 ILVIDGAGSLHTALVGDVIAELARSNGWAGLIINGAVRDSAALRGMNIGIKALGTNPRKS 122
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K G GE+ V IT+GG GE Y+D DGI++
Sbjct: 123 TKTGAGERDVEITLGGVTFVPGEIAYSDDDGIVV 156
>gi|261346866|ref|ZP_05974510.1| regulator of ribonuclease activity A [Providencia rustigianii DSM
4541]
gi|282565046|gb|EFB70581.1| regulator of ribonuclease activity A [Providencia rustigianii DSM
4541]
Length = 172
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I+T+K FEDN ++ + LEE G GR
Sbjct: 5 TSELCD-----IYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGILYDLLEEDGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +NGW GIVV G +R VD + D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALIDAELAQVAVSNGWEGIVVYGAVRQVDALMELDLGIQAVAATPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+GIGE + + G G++LYAD G+++S L+
Sbjct: 120 PDEGIGESDIRVNFGSVTFFSGDYLYADNTGMILSEEPLT 159
>gi|145637451|ref|ZP_01793110.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittHH]
gi|145269397|gb|EDK09341.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittHH]
Length = 162
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 98/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ +GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSVGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|262166681|ref|ZP_06034418.1| ribonuclease E inhibitor RraA [Vibrio mimicus VM223]
gi|262026397|gb|EEY45065.1| ribonuclease E inhibitor RraA [Vibrio mimicus VM223]
Length = 150
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 90/138 (65%)
Query: 28 IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQ 87
+F +G F+G I T+K +EDN LIRE LE+ G GR+L++DGGGSLR A++
Sbjct: 1 MFSNFGGCASFAGQITTIKCYEDNGLIRETLEQDGLGRILLIDGGGSLRRALIDAELAAL 60
Query: 88 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDG 147
A+ N W GIVV G +R+VDE+ IG++A+AS P+ A +G+GE +P+ GG
Sbjct: 61 AEENEWEGIVVYGSVREVDELEEMSIGIQAIASIPVGATSQGVGEVDIPVNFGGVTFLPE 120
Query: 148 EWLYADTDGILISRAELS 165
++LYAD GI+IS+ LS
Sbjct: 121 DYLYADNTGIIISQEPLS 138
>gi|90413627|ref|ZP_01221617.1| ribonuclease activity regulator protein RraA [Photobacterium
profundum 3TCK]
gi|90325400|gb|EAS41889.1| ribonuclease activity regulator protein RraA [Photobacterium
profundum 3TCK]
Length = 161
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F YG R F G I T+K FEDN L+R L++ G GR
Sbjct: 5 TSELCD-----IYLDQVDVIEPMFNSYGGRSSFGGQITTVKCFEDNALLRTVLQQPGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ + A N W G++V G +R+VD+++ +IG++A+AS P+ A
Sbjct: 60 VLLVDGGGSLRRALIDADIAQLATENEWEGLIVYGSVRNVDDLDELEIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+++G+G+ + + GG + +YAD G+++S L +
Sbjct: 120 DQQGVGDIDIAVNFGGVTFLPEDHIYADNTGVILSPEPLDI 160
>gi|148981658|ref|ZP_01816481.1| ribonuclease activity regulator protein RraA [Vibrionales bacterium
SWAT-3]
gi|145960781|gb|EDK26117.1| ribonuclease activity regulator protein RraA [Vibrionales bacterium
SWAT-3]
Length = 161
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE LE GNG+
Sbjct: 5 TPDLCDE-----FESKVTLLNLPLQNFGQRGAFWGKIVTVRCYHDNSKVREVLETDGNGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G++VNG +RDV ++ D+GV+AL + P K
Sbjct: 60 VLVVDGNGSCQKALLGDQLAILAIENGWEGVIVNGAVRDVGMMSQMDLGVQALGASPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G+G+ +V +T+ I G+++YAD +G+LIS L
Sbjct: 120 EKRGVGQVNVTLTVHNQLIQPGDYIYADWNGVLISSELL 158
>gi|170769672|ref|ZP_02904125.1| regulator of ribonuclease activity A [Escherichia albertii TW07627]
gi|170121480|gb|EDS90411.1| regulator of ribonuclease activity A [Escherichia albertii TW07627]
Length = 161
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G G
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGMVIYGAVRQVDDLEELDIGIQAMAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGVGESDVRVNFGGVTFFSGDHLYADNTGIILSEDLLDI 160
>gi|400534935|ref|ZP_10798472.1| ribonuclease activity regulator protein RraA [Mycobacterium
colombiense CECT 3035]
gi|400331293|gb|EJO88789.1| ribonuclease activity regulator protein RraA [Mycobacterium
colombiense CECT 3035]
Length = 161
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 5/157 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D+ + ++R+ F+ G R F+GPI T++ F+DN L++ L E G+G
Sbjct: 8 TADLVDS-----IGPDVRSCDVQFRQLGGRAEFAGPISTVRCFQDNALLKSVLSEPGDGG 62
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DG GSL A++G A++NGWAG++VNG +RD + G DIG++AL ++P K+
Sbjct: 63 VLVIDGDGSLHTALVGDVIAELARSNGWAGLIVNGAVRDSATLRGMDIGIKALGTNPRKS 122
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRA 162
K G GE+ V I +GG GE Y+D DGI++ A
Sbjct: 123 TKTGAGERDVEIALGGITFVPGEIAYSDDDGIVVVAA 159
>gi|418358011|ref|ZP_12960698.1| ribonuclease activity regulator protein RraA [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|356688787|gb|EHI53338.1| ribonuclease activity regulator protein RraA [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 159
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 89/143 (62%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
L+ P+F +G + +F G VTL +EDN L+RE + G GRV+V+DGGGSLR A+LG
Sbjct: 16 LQVADPLFHDFGGKPLFYGQAVTLSCYEDNSLVRELVNRPGQGRVMVIDGGGSLRRALLG 75
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
++A GW GIV+ G +RDV + +GV+ALA+ P+K K G GE ++ G
Sbjct: 76 DQLAIKAAEQGWEGIVIFGAVRDVGTLATLALGVKALAACPVKTEKLGQGELDAVVSFAG 135
Query: 142 TRISDGEWLYADTDGILISRAEL 164
I G+++YAD +G+L+S L
Sbjct: 136 VTIHPGDYVYADLNGVLVSATRL 158
>gi|15603033|ref|NP_246105.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. multocida str. Pm70]
gi|378775788|ref|YP_005178031.1| ribonuclease activity A regulator [Pasteurella multocida 36950]
gi|383311877|ref|YP_005364687.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. multocida str. HN06]
gi|386835830|ref|YP_006241150.1| ribonuclease activity A regulator [Pasteurella multocida subsp.
multocida str. 3480]
gi|417851167|ref|ZP_12496941.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. gallicida str. Anand1_poultry]
gi|417853928|ref|ZP_12499262.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. multocida str. Anand1_goat]
gi|425063862|ref|ZP_18466987.1| Ribonucleaseinhibitor RraA [Pasteurella multocida subsp. gallicida
X73]
gi|425066029|ref|ZP_18469149.1| Ribonucleaseinhibitor RraA [Pasteurella multocida subsp. gallicida
P1059]
gi|17368770|sp|Q9CLP9.1|RRAA_PASMU RecName: Full=Regulator of ribonuclease activity A
gi|12721518|gb|AAK03252.1| MenG [Pasteurella multocida subsp. multocida str. Pm70]
gi|338218786|gb|EGP04531.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. multocida str. Anand1_goat]
gi|338219942|gb|EGP05531.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. gallicida str. Anand1_poultry]
gi|356598336|gb|AET17062.1| regulator of ribonuclease activity A [Pasteurella multocida 36950]
gi|380873149|gb|AFF25516.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. multocida str. HN06]
gi|385202536|gb|AFI47391.1| regulator of ribonuclease activity A [Pasteurella multocida subsp.
multocida str. 3480]
gi|404382416|gb|EJZ78877.1| Ribonucleaseinhibitor RraA [Pasteurella multocida subsp. gallicida
X73]
gi|404382569|gb|EJZ79029.1| Ribonucleaseinhibitor RraA [Pasteurella multocida subsp. gallicida
P1059]
Length = 166
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE+N LI + LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGVNRFYGKVTTVKCFENNGLITDILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ A +NGW GI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALVDAELAQLAVDNGWEGIIVYGAVRQIQQLEEMDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+K+ IGE VP+ GG +++YAD GI++S+ L +
Sbjct: 118 GADKQNIGEIDVPVNFGGVTFFPEDYVYADLTGIILSQEPLEL 160
>gi|157962231|ref|YP_001502265.1| ribonuclease activity A regulator [Shewanella pealeana ATCC 700345]
gi|157847231|gb|ABV87730.1| regulator of ribonuclease activity A [Shewanella pealeana ATCC
700345]
Length = 165
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 95/146 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L L P+F YG+++ F G +VT+K + DN ++E L + G G+VLVVDG G + CA+L
Sbjct: 15 KLILLPPMFISYGKQECFWGEVVTVKCYRDNSKVKELLAQDGRGKVLVVDGQGGMDCALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW G+V+ GC+RDV + ++G++A+ ++P+K KKGIGE ++ + I
Sbjct: 75 GDMIAQNAADNGWQGVVILGCVRDVGTLKTINLGIQAIGANPIKTVKKGIGEVNIAVEIY 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G IS ++YAD +G+ IS L +
Sbjct: 135 GVIISPQSFIYADGNGVAISNEALDI 160
>gi|119478516|ref|ZP_01618478.1| ribonuclease activity regulator protein RraA [marine gamma
proteobacterium HTCC2143]
gi|119448497|gb|EAW29745.1| ribonuclease activity regulator protein RraA [marine gamma
proteobacterium HTCC2143]
Length = 162
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 101/161 (62%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
++T ++CD E++ +P+F+ +G + F G IVT+K FEDN + E ++ GN
Sbjct: 3 ISTPDLCDE-----YGDEVQVAEPVFKHFGGIRQFGGEIVTVKCFEDNSKVGEMVKTPGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGG S R ++LG V QA N W+GIV+ G IRDV+EI IGV AL + P
Sbjct: 58 GRVLVVDGGASPRRSLLGDMLVSQALVNNWSGIVIYGYIRDVEEIATMTIGVIALGTIPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K K+G+G+ ++ + + G I+ G+W+Y D G++++ L
Sbjct: 118 KTEKRGLGDVNIRLQMAGLDIAPGQWIYVDETGVIVADKPL 158
>gi|157377226|ref|YP_001475826.1| ribonuclease activity regulator protein RraA [Shewanella sediminis
HAW-EB3]
gi|189044042|sp|A8G0S5.1|RRAA_SHESH RecName: Full=Regulator of ribonuclease activity A
gi|157319600|gb|ABV38698.1| protein of unknown function 1935 [Shewanella sediminis HAW-EB3]
Length = 161
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L++ G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNYGGCNSFGGSISTIKCFEDNGLIAEALQQDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A+L + A +N W GI++ G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALLDASIAQLAVDNKWEGIIIYGSVRDVDALEDLDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ +GE +P+ GG + +YAD GI++S L +
Sbjct: 119 ADENSVGELEIPVNFGGVTFLPLDHVYADNTGIILSPEPLDM 160
>gi|88858824|ref|ZP_01133465.1| regulator of RNase E/rne protein [Pseudoalteromonas tunicata D2]
gi|88819050|gb|EAR28864.1| regulator of RNase E/rne protein [Pseudoalteromonas tunicata D2]
Length = 177
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD LI L+P+F +G R F G I T+K FE N LIR LE+ G G
Sbjct: 4 NTSELCDQFADLI-----DVLEPMFVNFGGRTSFGGQIKTIKCFESNQLIRTTLEKDGTG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VL++DGGGS R A++ A N W GIVV G +R VDE++ D+G++A+AS P+
Sbjct: 59 LVLLIDGGGSTRRALIDIELAELALENNWEGIVVYGAVRHVDELDELDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
A+ GE VP+ G D ++LYAD+ GI+I+ +L
Sbjct: 119 ADDNNNGEAGVPVNFAGVSFYDDDFLYADSTGIIIAPEDLE 159
>gi|209695975|ref|YP_002263905.1| ribonuclease activity regulator protein RraA [Aliivibrio
salmonicida LFI1238]
gi|208009928|emb|CAQ80241.1| demethylmenaquinone methyltransferase [Aliivibrio salmonicida
LFI1238]
Length = 158
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 89/136 (65%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
F+ +G R F G IVT++ ++DN L+RE L++ G G+VL +DG GS + A+LG + A
Sbjct: 22 FKDFGGRACFYGEIVTVRCYQDNSLVREVLQQNGKGKVLFIDGNGSCQKALLGDQVALLA 81
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
NN W G++V G IRDV EI +GV+AL + P K K+G GE+ V IT+ I G+
Sbjct: 82 VNNQWEGVIVYGAIRDVGEIRTMPLGVKALGTSPFKTEKRGAGEQQVSITVNTQVIPPGD 141
Query: 149 WLYADTDGILISRAEL 164
++YAD +G+LIS+ L
Sbjct: 142 YIYADLNGVLISKELL 157
>gi|319948319|ref|ZP_08022465.1| ribonuclease activity regulator protein RraA [Dietzia cinnamea P4]
gi|319438001|gb|EFV92975.1| ribonuclease activity regulator protein RraA [Dietzia cinnamea P4]
Length = 160
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ TA++ D + ++R+ F+ G R FSGPI T++ F+DN L++ L E G
Sbjct: 8 FIPTADLVDE-----IGEDVRSCDTQFRDLGGRTEFSGPISTVRCFQDNALLKSVLGEPG 62
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGG S+ A++G ++NGW+G+VVNG IRD I G + G +AL ++P
Sbjct: 63 EGRVLVIDGGASVHTALVGDIIAELGRSNGWSGVVVNGAIRDSAVIAGMEFGCKALGTNP 122
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ K G GE+ V ++ GG GE LYAD+DGI++
Sbjct: 123 RKSTKTGEGERDVTVSFGGVDFVPGEMLYADSDGIVV 159
>gi|384246819|gb|EIE20308.1| regulator of ribonuclease activity [Coccomyxa subellipsoidea C-169]
Length = 140
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 91/138 (65%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
F+ YG + FSG +T++ E N ++RE L+E G GRVLVVDG S RCA+LG +
Sbjct: 3 FRDYGGKTRFSGKAITIQCLETNQVLRETLDEAGEGRVLVVDGQASKRCALLGDILGAKL 62
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
NG++GI++NGC+RD +++ +GV+AL + P+K K +G K P+T G I+ G+
Sbjct: 63 HRNGFSGIIINGCVRDTEDLGKLPVGVKALNTCPVKPGKAPVGTKGEPVTFAGITINTGD 122
Query: 149 WLYADTDGILISRAELSV 166
W+YA DG+++S+ EL +
Sbjct: 123 WIYACADGVVVSKEELVI 140
>gi|326795356|ref|YP_004313176.1| Regulator of ribonuclease activity A [Marinomonas mediterranea
MMB-1]
gi|326546120|gb|ADZ91340.1| Regulator of ribonuclease activity A [Marinomonas mediterranea
MMB-1]
Length = 162
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD I + IFQ +G F G +VT+ FEDN +RE +G+G+
Sbjct: 5 TPDLCDHYADSITIAD-----SIFQDFGGNHCFYGEVVTVSCFEDNSKVRELAFSQGHGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+VVDG S R A+LG A NGW GIV+NG +RDV I+ + GV+AL + P+
Sbjct: 60 VIVVDGKASCRRALLGDMLAENAMKNGWKGIVINGAVRDVCTISKLNFGVKALCAFPLPT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
KKG+GE P+ G ++ G+++Y D +GI++S+ EL +
Sbjct: 120 EKKGLGEIGAPLEFAGIQLMSGDYIYCDRNGIVVSKTELKL 160
>gi|229844332|ref|ZP_04464472.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 6P18H1]
gi|229812581|gb|EEP48270.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 6P18H1]
Length = 162
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSHFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVVDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|288961969|ref|YP_003452279.1| regulator of ribonuclease activity A [Azospirillum sp. B510]
gi|288914249|dbj|BAI75735.1| regulator of ribonuclease activity A [Azospirillum sp. B510]
Length = 364
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
A V+T ++ D + R + P F+ +G F+GP+VT+K EDN ++E L
Sbjct: 204 AFVSTCDLFDR-----FKDDARYVLPGFRDFGAVTRFTGPVVTVKCLEDNSRVKELLGTP 258
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G GRVLVVDG GSLRCA++G A NGW G+V+ GC+RDV E+ +G++ALAS
Sbjct: 259 GAGRVLVVDGAGSLRCALMGDMIAASAVRNGWVGVVIWGCVRDVAELATLPLGIKALASI 318
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
P + ++ G VP+ + G I G+ L+AD DGI++ AE
Sbjct: 319 PRASTRRDQGLVDVPVELPGAVIRSGDILFADEDGIVLLTAE 360
>gi|373467200|ref|ZP_09558501.1| regulator of ribonuclease activity A [Haemophilus sp. oral taxon
851 str. F0397]
gi|371759159|gb|EHO47905.1| regulator of ribonuclease activity A [Haemophilus sp. oral taxon
851 str. F0397]
Length = 165
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GIVV G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIVVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|422016658|ref|ZP_16363238.1| ribonuclease activity regulator protein RraA [Providencia
burhodogranariea DSM 19968]
gi|414092424|gb|EKT54101.1| ribonuclease activity regulator protein RraA [Providencia
burhodogranariea DSM 19968]
Length = 172
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I + ++P+F +G R F G I+T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYQESVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYDLLEEDGQGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A +N W GIVV G +R VD + D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALIDAELARLAFDNHWEGIVVYGAVRQVDVLIELDLGIQAIAAMPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+++YAD GI++S L+
Sbjct: 120 PDEGVGESDIRVNFGGVTFFSGDYIYADNTGIILSEEPLTT 160
>gi|71279667|ref|YP_271023.1| ribonuclease activity regulator protein RraA [Colwellia
psychrerythraea 34H]
gi|123631000|sp|Q47VZ9.1|RRAA_COLP3 RecName: Full=Regulator of ribonuclease activity A
gi|71145407|gb|AAZ25880.1| protein of unknown function [Colwellia psychrerythraea 34H]
Length = 165
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD LI + PIF YG R F+G +VTLK FE LI E + G G+
Sbjct: 5 TSELCDFYADLI-----DVVDPIFCNYGGRSSFAGKVVTLKCFEHLGLINELVATYGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS R A++ A NNGW GIV G +RDVD ++G DIG++AL + P+ A
Sbjct: 60 VLVIDGGGSTRRALIDLGIAQCAANNGWEGIVCYGSVRDVDALDGVDIGIQALGAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+++ IGE + I G + +++YAD GI++S L +
Sbjct: 120 SEQNIGETDMAINFAGVTLLPDDYIYADNTGIILSPEALEI 160
>gi|167623797|ref|YP_001674091.1| ribonuclease activity A regulator [Shewanella halifaxensis HAW-EB4]
gi|167353819|gb|ABZ76432.1| regulator of ribonuclease activity A [Shewanella halifaxensis
HAW-EB4]
Length = 165
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 94/146 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L L P+F YG+R F G +VT+K DN ++E L + GNG+VLVVDG G+ A+L
Sbjct: 15 KLTLLPPMFISYGKRACFWGEVVTVKCLRDNSKVKEVLAKDGNGKVLVVDGQGATDSALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++NGW G+V+ GC+RDV + ++G++AL ++P+K KKGIGE ++ + I
Sbjct: 75 GDMIAQSAEDNGWQGVVIFGCVRDVGTLKTINLGIQALGANPVKTVKKGIGEVNIAVEIY 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G IS ++YAD +GI +S L +
Sbjct: 135 GVIISPHSFIYADGNGIAVSNERLDL 160
>gi|359778740|ref|ZP_09282002.1| ribonuclease regulator [Arthrobacter globiformis NBRC 12137]
gi|359304010|dbj|GAB15831.1| ribonuclease regulator [Arthrobacter globiformis NBRC 12137]
Length = 175
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 85/141 (60%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL ++ FQ G R FSGP+ T++ EDN L++ L GNG VLVVDG GSLR A++
Sbjct: 35 ELDSISLQFQSLGGRTHFSGPVRTVRCLEDNALVKSILATPGNGAVLVVDGAGSLRTALM 94
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG IRD I +GV+AL S+P K+ K G GE V + I
Sbjct: 95 GDMIAASAVANGWAGVVINGAIRDRGAIAELPLGVKALGSNPRKSAKAGAGETDVDLLID 154
Query: 141 GTRISDGEWLYADTDGILISR 161
G I G ++ D DGIL+ R
Sbjct: 155 GVTIRAGATIWCDPDGILVER 175
>gi|409202494|ref|ZP_11230697.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
flavipulchra JG1]
Length = 167
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G + FSG I T+K FE+N I++ L++ G G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGQTSFSGRITTVKCFENNEQIQDVLQQDGTG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGS R A++ + A N W GI+V G +R VDE+ DIG++A+AS P+
Sbjct: 59 RVLLVDGGGSTRRALVDIDLAELAVENNWQGIIVYGAVRHVDELEESDIGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
A+ G GE +P+ G + +++YAD+ GI+IS EL
Sbjct: 119 ADSSGSGEVGIPVNFAGVSFYEDDFVYADSTGIIISAEEL 158
>gi|319897976|ref|YP_004136173.1| ribonuclease e (rnase e) inhibitor protein [Haemophilus influenzae
F3031]
gi|317433482|emb|CBY81865.1| ribonuclease E (RNase E) inhibitor protein [Haemophilus influenzae
F3031]
Length = 162
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSHFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWGGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|320107984|ref|YP_004183574.1| ribonuclease activity A regulator [Terriglobus saanensis SP1PR4]
gi|319926505|gb|ADV83580.1| regulator of ribonuclease activity A [Terriglobus saanensis SP1PR4]
Length = 167
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 5/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + TA++ D L S +++ LQ +GRR F G I T+K ++DNVL+R LE
Sbjct: 3 MRSIPTADLIDDYSDLCASCDVQFLQ-----FGRRSSFHGRIRTVKCYDDNVLVRRALEA 57
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
+ +G VLVVDG G L A++G A +NGWAGIV+ G +RD + +I ++AL +
Sbjct: 58 QSDGEVLVVDGAGFLGSALVGDQIASLAISNGWAGIVIFGALRDSVALREMEISIKALGN 117
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+P K+ K GIGE V + G G+W+Y+D DGIL+S+ L
Sbjct: 118 NPRKSGKNGIGESDVAVRFGNVVFRPGDWIYSDEDGILVSQENL 161
>gi|392540455|ref|ZP_10287592.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
piscicida JCM 20779]
Length = 167
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G + FSG I T+K FE+N I++ L++ G G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGQTSFSGRITTVKCFENNEQIQDVLQQDGTG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGS R A++ + A N W GI+V G +R VDE+ DIG++A+AS P+
Sbjct: 59 RVLLVDGGGSTRRALVDIDLAELAVENNWQGIIVYGAVRHVDELEESDIGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
A+ G GE +P+ G + +++YAD+ GI+IS EL
Sbjct: 119 ADSSGSGEVGIPVNFAGVSFYEDDFVYADSTGIIISAEEL 158
>gi|417841137|ref|ZP_12487242.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M19501]
gi|341949731|gb|EGT76332.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M19501]
Length = 165
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSHFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|269140780|ref|YP_003297481.1| ribonuclease activity regulator protein RraA [Edwardsiella tarda
EIB202]
gi|387869227|ref|YP_005700696.1| Ribonuclease E inhibitor RraA [Edwardsiella tarda FL6-60]
gi|267986441|gb|ACY86270.1| ribonuclease activity regulator protein RraA [Edwardsiella tarda
EIB202]
gi|304560540|gb|ADM43204.1| Ribonuclease E inhibitor RraA [Edwardsiella tarda FL6-60]
Length = 143
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 89/142 (62%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNP 84
++P+F +G R F G I T+K FEDN L+ + LEE G GRVLV+DGGGS+R A++
Sbjct: 1 MEPLFSNFGGRSSFGGQITTVKCFEDNGLLYDLLEENGRGRVLVIDGGGSVRRALVNAEL 60
Query: 85 VVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRI 144
A N W GIVV G +R VD++ DIG++A+A+ P A+ +GIGE + + GG
Sbjct: 61 GRLAVQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPAGADSEGIGESDIRVNFGGVTF 120
Query: 145 SDGEWLYADTDGILISRAELSV 166
G+ LYAD GI+++ L +
Sbjct: 121 FSGDHLYADNTGIILAEEPLDI 142
>gi|68249107|ref|YP_248219.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 86-028NP]
gi|145628889|ref|ZP_01784689.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 22.1-21]
gi|145630312|ref|ZP_01786093.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae R3021]
gi|145634494|ref|ZP_01790203.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittAA]
gi|145638575|ref|ZP_01794184.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittII]
gi|260582229|ref|ZP_05850022.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae NT127]
gi|319775569|ref|YP_004138057.1| ribonuclease E (RNase E) inhibitor protein [Haemophilus influenzae
F3047]
gi|329122388|ref|ZP_08250975.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Haemophilus aegyptius ATCC 11116]
gi|378696706|ref|YP_005178664.1| ribonuclease E (RNase E) inhibitor protein [Haemophilus influenzae
10810]
gi|386265103|ref|YP_005828595.1| Regulator of ribonuclease activity A [Haemophilus influenzae R2846]
gi|81336487|sp|Q4QN38.1|RRAA_HAEI8 RecName: Full=Regulator of ribonuclease activity A
gi|68057306|gb|AAX87559.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Haemophilus influenzae 86-028NP]
gi|144979359|gb|EDJ89045.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 22.1-21]
gi|144984047|gb|EDJ91484.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae R3021]
gi|145268039|gb|EDK08034.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittAA]
gi|145272170|gb|EDK12078.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittII]
gi|260094597|gb|EEW78492.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae NT127]
gi|301169225|emb|CBW28822.1| ribonuclease E (RNase E) inhibitor protein [Haemophilus influenzae
10810]
gi|309750079|gb|ADO80063.1| Regulator of ribonuclease activity A [Haemophilus influenzae R2866]
gi|309972339|gb|ADO95540.1| Regulator of ribonuclease activity A [Haemophilus influenzae R2846]
gi|317450160|emb|CBY86374.1| ribonuclease E (RNase E) inhibitor protein [Haemophilus influenzae
F3047]
gi|327473670|gb|EGF19089.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Haemophilus aegyptius ATCC 11116]
Length = 162
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSHFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|407641239|ref|YP_006804998.1| ribonuclease activity regulator protein RraA [Nocardia brasiliensis
ATCC 700358]
gi|407304123|gb|AFT98023.1| ribonuclease activity regulator protein RraA [Nocardia brasiliensis
ATCC 700358]
Length = 162
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 101/161 (62%), Gaps = 6/161 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
V TA++ D + E+R+ F +G R F+G I T++ F+DN+L+++ L E G
Sbjct: 7 FVATADLADE-----IGPEIRSCDTQFIQFGGRAAFAGRITTIRCFQDNLLVKQTLGEPG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G+VLVVDGG S+ A++G + +NGWAG++VNG +RD + DIGV+AL ++P
Sbjct: 62 QGKVLVVDGGASVHTALVGDIIAGRGVDNGWAGVIVNGAVRDSAILRTLDIGVKALGTNP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
K+ + G G++ VP+ GG G+ LY+D DG+++ RAE
Sbjct: 122 RKSTQTGTGDRDVPVEFGGVTFVPGDMLYSDHDGVVV-RAE 161
>gi|16272452|ref|NP_438666.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae Rd KW20]
gi|145640483|ref|ZP_01796067.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae R3021]
gi|148825214|ref|YP_001289967.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittEE]
gi|148827701|ref|YP_001292454.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittGG]
gi|229846593|ref|ZP_04466701.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 7P49H1]
gi|260580429|ref|ZP_05848257.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae RdAW]
gi|1170921|sp|P44738.1|RRAA_HAEIN RecName: Full=Regulator of ribonuclease activity A
gi|166230384|sp|A5U9Y3.1|RRAA_HAEIE RecName: Full=Regulator of ribonuclease activity A
gi|166230385|sp|A5UH15.1|RRAA_HAEIG RecName: Full=Regulator of ribonuclease activity A
gi|1573489|gb|AAC22166.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase (menG)
[Haemophilus influenzae Rd KW20]
gi|145275069|gb|EDK14931.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 22.4-21]
gi|148715374|gb|ABQ97584.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittEE]
gi|148718943|gb|ABR00071.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae PittGG]
gi|229810686|gb|EEP46404.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 7P49H1]
gi|260092771|gb|EEW76706.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae RdAW]
Length = 162
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|119775023|ref|YP_927763.1| ribonuclease activity regulator protein RraA [Shewanella
amazonensis SB2B]
gi|119767523|gb|ABM00094.1| regulator of ribonuclease activity A [Shewanella amazonensis SB2B]
Length = 164
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 92/138 (66%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
++ +G +++F G +VT+ FEDN ++E L G GRVLVVDGGGS R A++G A
Sbjct: 23 WRQFGAKRIFYGQVVTVSCFEDNSRVKELLATPGMGRVLVVDGGGSQRKALVGDLIAQSA 82
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
+NGWAGIVV G IRDV + +IGV+AL S P+K ++G+G+ V + + G ++ G+
Sbjct: 83 LDNGWAGIVVYGAIRDVGTLATLNIGVQALGSVPIKTERRGLGDTGVTLNLVGVTVNPGD 142
Query: 149 WLYADTDGILISRAELSV 166
W+YAD +GI +SR L +
Sbjct: 143 WIYADDNGIAVSREALPI 160
>gi|145633538|ref|ZP_01789267.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 3655]
gi|144985907|gb|EDJ92515.1| ribonuclease activity regulator protein RraA [Haemophilus
influenzae 3655]
Length = 162
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQFAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|419838521|ref|ZP_14361946.1| regulator of ribonuclease activity A [Haemophilus haemolyticus
HK386]
gi|386910286|gb|EIJ74943.1| regulator of ribonuclease activity A [Haemophilus haemolyticus
HK386]
Length = 165
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE VP+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESTAGESDVPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|217973503|ref|YP_002358254.1| ribonuclease activity regulator protein RraA [Shewanella baltica
OS223]
gi|217498638|gb|ACK46831.1| regulator of ribonuclease activity A [Shewanella baltica OS223]
Length = 164
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 94/145 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L+ L F+ YG +++F G IVT+K FEDN ++E L + G G+VLVVDGGGSL A+L
Sbjct: 15 KLQLLPLEFKPYGGKRLFWGEIVTVKCFEDNSKVKEILAQDGQGKVLVVDGGGSLCRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW GIV+NGC+RDV +N +GV AL + P+K K G+ +V + +G
Sbjct: 75 GDLIAQSALDNGWQGIVINGCVRDVARLNTFSLGVYALGAMPIKTEKLDQGQINVAVDMG 134
Query: 141 GTRISDGEWLYADTDGILISRAELS 165
G ++ G LYAD +GI +S L+
Sbjct: 135 GVMVTPGMMLYADENGIAVSDEMLN 159
>gi|418048494|ref|ZP_12686581.1| Regulator of ribonuclease activity A [Mycobacterium rhodesiae JS60]
gi|353189399|gb|EHB54909.1| Regulator of ribonuclease activity A [Mycobacterium rhodesiae JS60]
Length = 159
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 92/145 (63%)
Query: 18 VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRC 77
+ E+R+ F+ +G R F+GPI T++ F+DN L++ L E G GRVLVVDG S+
Sbjct: 15 IGSEVRSCDVQFRQFGGRTEFAGPISTVRCFQDNALLKSVLSEPGRGRVLVVDGDASVHT 74
Query: 78 AILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPI 137
A++G ++NGWAG++V+G +RD + DIG++AL ++P K+ K G GE+ V +
Sbjct: 75 ALVGDLIAELGRSNGWAGLIVHGAVRDATTLRTLDIGIKALGTNPRKSTKTGAGERDVTV 134
Query: 138 TIGGTRISDGEWLYADTDGILISRA 162
+ GG GE Y+D DGI+++ +
Sbjct: 135 SFGGVSFVPGEVAYSDDDGIVVTSS 159
>gi|163748739|ref|ZP_02155992.1| ribonuclease activity regulator protein RraA [Shewanella benthica
KT99]
gi|161331849|gb|EDQ02653.1| ribonuclease activity regulator protein RraA [Shewanella benthica
KT99]
Length = 161
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L++ G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNYGGCNSFGGSISTIKCFEDNGLIAEALQQDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGSLR A+L + A N W GI++ G +RDVD + D+G++ALAS P+
Sbjct: 59 RVLLVDGGGSLRRALLDSSIAQIAVENKWEGIIIYGSVRDVDALEDLDLGIQALASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG + +YAD GI++S L +
Sbjct: 119 ADGHSVGELEIPVNFGGVTFLPLDHVYADNTGIILSPEPLDI 160
>gi|345874824|ref|ZP_08826623.1| regulator of ribonuclease activity A [Neisseria weaveri LMG 5135]
gi|417957198|ref|ZP_12600124.1| regulator of ribonuclease activity A [Neisseria weaveri ATCC 51223]
gi|343968778|gb|EGV37001.1| regulator of ribonuclease activity A [Neisseria weaveri ATCC 51223]
gi|343969929|gb|EGV38132.1| regulator of ribonuclease activity A [Neisseria weaveri LMG 5135]
Length = 163
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D P + + + F+ +G+R FSG I T+K DN L+++ + +G
Sbjct: 8 TADLIDIAP------DTPSCETQFRSFGKRSCFSGKIRTVKCERDNGLVKQLMNTPSDGE 61
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+V+DG GSL A++G NGWAG V+ G IRD + +NG D GV+AL ++P K+
Sbjct: 62 VVVIDGSGSLYSALMGDMIAAAGAQNGWAGAVIYGAIRDNEAMNGMDFGVKALGTNPRKS 121
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K G G +P++ GG + G +LY+D+DGIL+S L
Sbjct: 122 AKDGAGSVDIPVSFGGVTFTPGHYLYSDSDGILVSEQPL 160
>gi|294142575|ref|YP_003558553.1| regulator of ribonuclease activity A protein [Shewanella violacea
DSS12]
gi|293329044|dbj|BAJ03775.1| regulator of ribonuclease activity A protein [Shewanella violacea
DSS12]
Length = 161
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L++ G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNYGGCNSFGGSISTIKCFEDNGLIAEALQQDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGSLR A+L + A N W GI++ G +RDVD + D+G++ALAS P+
Sbjct: 59 RVLLVDGGGSLRRALLDSSIAKIAVENKWEGIIIYGSVRDVDALEDLDLGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ IGE +P+ GG + +YAD GI++S L +
Sbjct: 119 ADGHSIGELEIPVNFGGVTFLPLDHVYADNTGIILSPEPLDI 160
>gi|417709522|ref|ZP_12358543.1| regulator of ribonuclease activity A [Shigella flexneri VA-6]
gi|332997994|gb|EGK17600.1| regulator of ribonuclease activity A [Shigella flexneri VA-6]
Length = 143
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNP 84
++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++
Sbjct: 1 MEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAKL 60
Query: 85 VVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRI 144
A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG
Sbjct: 61 ARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTF 120
Query: 145 SDGEWLYADTDGILISRAELSV 166
G+ LYAD GI++S L +
Sbjct: 121 FSGDHLYADNTGIILSEDPLDI 142
>gi|336123401|ref|YP_004565449.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio anguillarum 775]
gi|335341124|gb|AEH32407.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio anguillarum 775]
Length = 184
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G R F G IVT++ + DN +R+ L + G G+
Sbjct: 28 TPDICDK-----FESQINILDLPLQTFGLRSAFWGQIVTVRCYHDNSKVRDVLSQNGKGK 82
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G+++ G IRDV ++ D+GV+ALAS P+K
Sbjct: 83 VLVVDGNGSCQRALLGDQLAIMAIENGWEGVIIYGAIRDVAALSQMDLGVKALASCPLKT 142
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+G GE +V +TI I G+++YAD +G+L S L
Sbjct: 143 DKRGAGEINVTLTILNQMIQPGDYVYADWNGVLTSTQAL 181
>gi|365538697|ref|ZP_09363872.1| ribonuclease activity regulator protein RraA [Vibrio ordalii ATCC
33509]
Length = 161
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G R F G IVT++ + DN +R+ L + G G+
Sbjct: 5 TPDICDK-----FESQINILDLPLQTFGLRSAFWGQIVTVRCYHDNSKVRDVLSQNGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G+++ G IRDV ++ D+GV+ALAS P+K
Sbjct: 60 VLVVDGNGSCQRALLGDQLAIMAIENGWEGVIIYGAIRDVAALSQMDLGVKALASCPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+K+G GE +V +TI I G+++YAD +G+L S L
Sbjct: 120 DKRGAGEINVTLTILNQMIQPGDYVYADWNGVLTSTQAL 158
>gi|312969319|ref|ZP_07783521.1| regulator of ribonuclease activity A [Escherichia coli 2362-75]
gi|386621606|ref|YP_006141186.1| Ribonuclease E inhibitor RraA [Escherichia coli NA114]
gi|416900543|ref|ZP_11929788.1| regulator of ribonuclease activity A [Escherichia coli STEC_7v]
gi|417087947|ref|ZP_11954766.1| ribonuclease activity regulator protein RraA [Escherichia coli
cloneA_i1]
gi|417116584|ref|ZP_11967445.1| regulator of ribonuclease activity A [Escherichia coli 1.2741]
gi|417220786|ref|ZP_12024226.1| regulator of ribonuclease activity A [Escherichia coli 96.154]
gi|417228972|ref|ZP_12030730.1| regulator of ribonuclease activity A [Escherichia coli 5.0959]
gi|417269660|ref|ZP_12057020.1| regulator of ribonuclease activity A [Escherichia coli 3.3884]
gi|417287481|ref|ZP_12074767.1| regulator of ribonuclease activity A [Escherichia coli TW07793]
gi|417583596|ref|ZP_12234393.1| regulator of ribonuclease activity A [Escherichia coli STEC_B2F1]
gi|417594406|ref|ZP_12245092.1| regulator of ribonuclease activity A [Escherichia coli 2534-86]
gi|417631419|ref|ZP_12281649.1| regulator of ribonuclease activity A [Escherichia coli STEC_MHI813]
gi|417704289|ref|ZP_12353388.1| regulator of ribonuclease activity A [Shigella flexneri K-218]
gi|417725197|ref|ZP_12373986.1| regulator of ribonuclease activity A [Shigella flexneri K-304]
gi|417730468|ref|ZP_12379155.1| regulator of ribonuclease activity A [Shigella flexneri K-671]
gi|417745404|ref|ZP_12393923.1| regulator of ribonuclease activity A [Shigella flexneri 2930-71]
gi|418960184|ref|ZP_13512077.1| ribonuclease activity regulator protein RraA [Escherichia coli J53]
gi|419021067|ref|ZP_13568362.1| regulator of ribonuclease activity A [Escherichia coli DEC1E]
gi|419047935|ref|ZP_13594863.1| regulator of ribonuclease activity A [Escherichia coli DEC3A]
gi|419053818|ref|ZP_13600682.1| regulator of ribonuclease activity A [Escherichia coli DEC3B]
gi|419059855|ref|ZP_13606652.1| regulator of ribonuclease activity A [Escherichia coli DEC3C]
gi|419072284|ref|ZP_13617880.1| regulator of ribonuclease activity A [Escherichia coli DEC3E]
gi|419089242|ref|ZP_13634589.1| regulator of ribonuclease activity A [Escherichia coli DEC4B]
gi|419106576|ref|ZP_13651696.1| regulator of ribonuclease activity A [Escherichia coli DEC4E]
gi|419166898|ref|ZP_13711344.1| regulator of ribonuclease activity A [Escherichia coli DEC6E]
gi|419172891|ref|ZP_13716761.1| regulator of ribonuclease activity A [Escherichia coli DEC7A]
gi|419177543|ref|ZP_13721348.1| regulator of ribonuclease activity A [Escherichia coli DEC7B]
gi|419183454|ref|ZP_13727058.1| regulator of ribonuclease activity A [Escherichia coli DEC7C]
gi|419189068|ref|ZP_13732569.1| regulator of ribonuclease activity A [Escherichia coli DEC7D]
gi|419206045|ref|ZP_13749197.1| regulator of ribonuclease activity A [Escherichia coli DEC8B]
gi|419229178|ref|ZP_13772015.1| regulator of ribonuclease activity A [Escherichia coli DEC9A]
gi|419234754|ref|ZP_13777519.1| regulator of ribonuclease activity A [Escherichia coli DEC9B]
gi|419240170|ref|ZP_13782873.1| regulator of ribonuclease activity A [Escherichia coli DEC9C]
gi|419251461|ref|ZP_13794026.1| regulator of ribonuclease activity A [Escherichia coli DEC9E]
gi|419269466|ref|ZP_13811808.1| regulator of ribonuclease activity A [Escherichia coli DEC10C]
gi|419286482|ref|ZP_13828643.1| regulator of ribonuclease activity A [Escherichia coli DEC10F]
gi|419337132|ref|ZP_13878640.1| regulator of ribonuclease activity A [Escherichia coli DEC12D]
gi|419388756|ref|ZP_13929615.1| regulator of ribonuclease activity A [Escherichia coli DEC14D]
gi|419807450|ref|ZP_14332504.1| ribonuclease activity regulator protein RraA [Escherichia coli
AI27]
gi|420322532|ref|ZP_14824352.1| regulator of ribonuclease activity A [Shigella flexneri 2850-71]
gi|420333451|ref|ZP_14835090.1| regulator of ribonuclease activity A [Shigella flexneri K-1770]
gi|420388295|ref|ZP_14887623.1| regulator of ribonuclease activity A [Escherichia coli EPECa12]
gi|423728184|ref|ZP_17701947.1| regulator of ribonuclease activity A [Escherichia coli PA31]
gi|424086666|ref|ZP_17823134.1| regulator of ribonuclease activity A [Escherichia coli FDA517]
gi|424093082|ref|ZP_17828988.1| regulator of ribonuclease activity A [Escherichia coli FRIK1996]
gi|424553441|ref|ZP_17995250.1| regulator of ribonuclease activity A [Escherichia coli EC4439]
gi|425176910|ref|ZP_18575013.1| regulator of ribonuclease activity A [Escherichia coli FDA504]
gi|425196001|ref|ZP_18592755.1| regulator of ribonuclease activity A [Escherichia coli NE1487]
gi|425307752|ref|ZP_18697413.1| regulator of ribonuclease activity A [Escherichia coli N1]
gi|425382284|ref|ZP_18766261.1| regulator of ribonuclease activity A [Escherichia coli EC1865]
gi|425407412|ref|ZP_18789616.1| regulator of ribonuclease activity A [Escherichia coli EC1870]
gi|429035428|ref|ZP_19100934.1| regulator of ribonuclease activity A [Escherichia coli 96.0939]
gi|429835662|ref|ZP_19365886.1| regulator of ribonuclease activity A [Escherichia coli 97.0010]
gi|312285866|gb|EFR13784.1| regulator of ribonuclease activity A [Escherichia coli 2362-75]
gi|327250567|gb|EGE62275.1| regulator of ribonuclease activity A [Escherichia coli STEC_7v]
gi|332751854|gb|EGJ82251.1| regulator of ribonuclease activity A [Shigella flexneri K-671]
gi|332764531|gb|EGJ94763.1| regulator of ribonuclease activity A [Shigella flexneri 2930-71]
gi|332998592|gb|EGK18189.1| regulator of ribonuclease activity A [Shigella flexneri K-218]
gi|333013851|gb|EGK33213.1| regulator of ribonuclease activity A [Shigella flexneri K-304]
gi|333972107|gb|AEG38912.1| Ribonuclease E inhibitor RraA [Escherichia coli NA114]
gi|345331513|gb|EGW63973.1| regulator of ribonuclease activity A [Escherichia coli 2534-86]
gi|345333622|gb|EGW66072.1| regulator of ribonuclease activity A [Escherichia coli STEC_B2F1]
gi|345369068|gb|EGX01057.1| regulator of ribonuclease activity A [Escherichia coli STEC_MHI813]
gi|355349435|gb|EHF98641.1| ribonuclease activity regulator protein RraA [Escherichia coli
cloneA_i1]
gi|377855751|gb|EHU20616.1| regulator of ribonuclease activity A [Escherichia coli DEC1E]
gi|377888839|gb|EHU53309.1| regulator of ribonuclease activity A [Escherichia coli DEC3A]
gi|377889025|gb|EHU53493.1| regulator of ribonuclease activity A [Escherichia coli DEC3B]
gi|377901815|gb|EHU66129.1| regulator of ribonuclease activity A [Escherichia coli DEC3C]
gi|377906264|gb|EHU70513.1| regulator of ribonuclease activity A [Escherichia coli DEC3E]
gi|377926504|gb|EHU90438.1| regulator of ribonuclease activity A [Escherichia coli DEC4B]
gi|377943606|gb|EHV07316.1| regulator of ribonuclease activity A [Escherichia coli DEC4E]
gi|378006029|gb|EHV69020.1| regulator of ribonuclease activity A [Escherichia coli DEC6E]
gi|378010008|gb|EHV72956.1| regulator of ribonuclease activity A [Escherichia coli DEC7A]
gi|378020850|gb|EHV83582.1| regulator of ribonuclease activity A [Escherichia coli DEC7C]
gi|378023842|gb|EHV86511.1| regulator of ribonuclease activity A [Escherichia coli DEC7D]
gi|378028239|gb|EHV90858.1| regulator of ribonuclease activity A [Escherichia coli DEC7B]
gi|378043102|gb|EHW05540.1| regulator of ribonuclease activity A [Escherichia coli DEC8B]
gi|378068613|gb|EHW30710.1| regulator of ribonuclease activity A [Escherichia coli DEC9A]
gi|378073940|gb|EHW35984.1| regulator of ribonuclease activity A [Escherichia coli DEC9B]
gi|378079646|gb|EHW41618.1| regulator of ribonuclease activity A [Escherichia coli DEC9C]
gi|378089563|gb|EHW51405.1| regulator of ribonuclease activity A [Escherichia coli DEC9E]
gi|378107237|gb|EHW68859.1| regulator of ribonuclease activity A [Escherichia coli DEC10C]
gi|378125481|gb|EHW86880.1| regulator of ribonuclease activity A [Escherichia coli DEC10F]
gi|378178867|gb|EHX39617.1| regulator of ribonuclease activity A [Escherichia coli DEC12D]
gi|378226935|gb|EHX87116.1| regulator of ribonuclease activity A [Escherichia coli DEC14D]
gi|384376999|gb|EIE34897.1| ribonuclease activity regulator protein RraA [Escherichia coli J53]
gi|384469544|gb|EIE53701.1| ribonuclease activity regulator protein RraA [Escherichia coli
AI27]
gi|386139128|gb|EIG80283.1| regulator of ribonuclease activity A [Escherichia coli 1.2741]
gi|386200588|gb|EIH99578.1| regulator of ribonuclease activity A [Escherichia coli 96.154]
gi|386208307|gb|EII12812.1| regulator of ribonuclease activity A [Escherichia coli 5.0959]
gi|386228465|gb|EII55821.1| regulator of ribonuclease activity A [Escherichia coli 3.3884]
gi|386248266|gb|EII94438.1| regulator of ribonuclease activity A [Escherichia coli TW07793]
gi|390636983|gb|EIN16542.1| regulator of ribonuclease activity A [Escherichia coli FRIK1996]
gi|390638195|gb|EIN17712.1| regulator of ribonuclease activity A [Escherichia coli FDA517]
gi|390736777|gb|EIO08100.1| regulator of ribonuclease activity A [Escherichia coli PA31]
gi|390874710|gb|EIP35802.1| regulator of ribonuclease activity A [Escherichia coli EC4439]
gi|391245269|gb|EIQ04542.1| regulator of ribonuclease activity A [Shigella flexneri 2850-71]
gi|391246027|gb|EIQ05292.1| regulator of ribonuclease activity A [Shigella flexneri K-1770]
gi|391301258|gb|EIQ59156.1| regulator of ribonuclease activity A [Escherichia coli EPECa12]
gi|408088314|gb|EKH21693.1| regulator of ribonuclease activity A [Escherichia coli FDA504]
gi|408105646|gb|EKH37797.1| regulator of ribonuclease activity A [Escherichia coli NE1487]
gi|408224619|gb|EKI48325.1| regulator of ribonuclease activity A [Escherichia coli N1]
gi|408292978|gb|EKJ11451.1| regulator of ribonuclease activity A [Escherichia coli EC1865]
gi|408321237|gb|EKJ37279.1| regulator of ribonuclease activity A [Escherichia coli EC1870]
gi|427280299|gb|EKW44664.1| regulator of ribonuclease activity A [Escherichia coli 96.0939]
gi|429251129|gb|EKY35757.1| regulator of ribonuclease activity A [Escherichia coli 97.0010]
Length = 143
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNP 84
++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++
Sbjct: 1 MEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAEL 60
Query: 85 VVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRI 144
A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG
Sbjct: 61 ARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTF 120
Query: 145 SDGEWLYADTDGILISRAELSV 166
G+ LYAD GI++S L +
Sbjct: 121 FSGDHLYADNTGIILSEDPLDI 142
>gi|167625782|ref|YP_001676076.1| ribonuclease activity regulator protein RraA [Shewanella
halifaxensis HAW-EB4]
gi|167355804|gb|ABZ78417.1| Ribonuclease E inhibitor RraA [Shewanella halifaxensis HAW-EB4]
Length = 161
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F +G F G I T+K FEDN LI + ++E G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNFGGCNSFGGSISTIKCFEDNGLIIDAVQEDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL++DGGGSLR A+L A N W GI+V G +RDVD + DIG++ALAS P+
Sbjct: 59 KVLLIDGGGSLRRALLDARIAEAAVANNWEGIIVYGTVRDVDALEDLDIGIQALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG G+ +YAD GI++S L +
Sbjct: 119 ADSNAVGELEIPVNFGGVTFLPGDHVYADNTGIILSPEPLDI 160
>gi|251791969|ref|YP_003006689.1| ribonuclease activity regulator protein RraA [Aggregatibacter
aphrophilus NJ8700]
gi|422336877|ref|ZP_16417849.1| regulator-ribonuclease activity A [Aggregatibacter aphrophilus
F0387]
gi|247533356|gb|ACS96602.1| hypothetical protein NT05HA_0164 [Aggregatibacter aphrophilus
NJ8700]
gi|353345887|gb|EHB90176.1| regulator-ribonuclease activity A [Aggregatibacter aphrophilus
F0387]
Length = 166
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G I T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGLSSFHGKITTVKCFENNGLIAELLEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +N W GI+V G +R + ++ DIG++ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNNWEGIIVYGAVRQIQQLENIDIGIQALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE VP+ GG +++YAD GI++S+ L +
Sbjct: 118 GADEGNHGETDVPVNFGGVTFFPEDYVYADLTGIILSQEPLDL 160
>gi|15826911|ref|NP_301174.1| ribonuclease activity regulator protein RraA [Mycobacterium leprae
TN]
gi|221229389|ref|YP_002502805.1| ribonuclease activity regulator protein RraA [Mycobacterium leprae
Br4923]
gi|17368730|sp|Q9CDD2.1|RRAAH_MYCLE RecName: Full=Putative regulator of ribonuclease activity
gi|254809481|sp|B8ZTT3.1|RRAAH_MYCLB RecName: Full=Putative regulator of ribonuclease activity
gi|13092458|emb|CAC29574.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Mycobacterium leprae]
gi|219932496|emb|CAR70159.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Mycobacterium leprae Br4923]
Length = 157
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 90/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G F+GPI T++ F+DN L++ L + G VLVVDG GSL A++
Sbjct: 18 DVRSCDLQFRQFGGCSEFAGPISTVRCFQDNALLKSVLSQTSAGGVLVVDGAGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGWAG++VNG +RD + G DIG++AL ++P K+ K G GE+HV + +G
Sbjct: 78 GDVIAELAHSNGWAGLIVNGAVRDAAALRGIDIGIKALGTNPRKSTKIGTGERHVEVNLG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G GE +Y+D DGI++
Sbjct: 138 GVTFVPGEVVYSDDDGIVV 156
>gi|359455099|ref|ZP_09244346.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20495]
gi|414071017|ref|ZP_11406993.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
Bsw20308]
gi|358047814|dbj|GAA80595.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20495]
gi|410806523|gb|EKS12513.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
Bsw20308]
Length = 165
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIRE L + G G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIRELLSQDGTG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VL++DGGGS R A++ A N W GIVV G +R VDE+ D+G++A+AS P+
Sbjct: 59 LVLLIDGGGSTRRALIDIEIAELALENNWNGIVVYGAVRHVDELEELDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +G GE + + G D +++YAD+ GI++S EL +
Sbjct: 119 ADSEGAGEDAIGVNFAGVSFFDDDFIYADSTGIVLSAEELEL 160
>gi|294502199|ref|YP_003566261.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis Z176003]
gi|384120682|ref|YP_005503302.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis D106004]
gi|384124561|ref|YP_005507175.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis D182038]
gi|420555259|ref|ZP_15052319.1| regulator of ribonuclease activity A [Yersinia pestis PY-03]
gi|420630182|ref|ZP_15119575.1| regulator of ribonuclease activity A [Yersinia pestis PY-19]
gi|420635312|ref|ZP_15124163.1| regulator of ribonuclease activity A [Yersinia pestis PY-25]
gi|420657134|ref|ZP_15143892.1| regulator of ribonuclease activity A [Yersinia pestis PY-36]
gi|420662497|ref|ZP_15148677.1| regulator of ribonuclease activity A [Yersinia pestis PY-42]
gi|420667518|ref|ZP_15153214.1| regulator of ribonuclease activity A [Yersinia pestis PY-45]
gi|420678301|ref|ZP_15163024.1| regulator of ribonuclease activity A [Yersinia pestis PY-47]
gi|420688695|ref|ZP_15172318.1| regulator of ribonuclease activity A [Yersinia pestis PY-52]
gi|420743670|ref|ZP_15220477.1| regulator of ribonuclease activity A [Yersinia pestis PY-64]
gi|420760739|ref|ZP_15234810.1| regulator of ribonuclease activity A [Yersinia pestis PY-71]
gi|420803152|ref|ZP_15272739.1| regulator of ribonuclease activity A [Yersinia pestis PY-93]
gi|420834981|ref|ZP_15301412.1| regulator of ribonuclease activity A [Yersinia pestis PY-100]
gi|420851038|ref|ZP_15315899.1| regulator of ribonuclease activity A [Yersinia pestis PY-103]
gi|262360278|gb|ACY56999.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis D106004]
gi|262364225|gb|ACY60782.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis D182038]
gi|294352658|gb|ADE62999.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Yersinia pestis Z176003]
gi|391437320|gb|EIQ98189.1| regulator of ribonuclease activity A [Yersinia pestis PY-03]
gi|391514833|gb|EIR67906.1| regulator of ribonuclease activity A [Yersinia pestis PY-19]
gi|391516335|gb|EIR69240.1| regulator of ribonuclease activity A [Yersinia pestis PY-25]
gi|391545980|gb|EIR96011.1| regulator of ribonuclease activity A [Yersinia pestis PY-36]
gi|391547747|gb|EIR97613.1| regulator of ribonuclease activity A [Yersinia pestis PY-42]
gi|391548313|gb|EIR98128.1| regulator of ribonuclease activity A [Yersinia pestis PY-45]
gi|391563110|gb|EIS11455.1| regulator of ribonuclease activity A [Yersinia pestis PY-47]
gi|391577429|gb|EIS23861.1| regulator of ribonuclease activity A [Yersinia pestis PY-52]
gi|391630210|gb|EIS70005.1| regulator of ribonuclease activity A [Yersinia pestis PY-64]
gi|391643759|gb|EIS81895.1| regulator of ribonuclease activity A [Yersinia pestis PY-71]
gi|391687416|gb|EIT20729.1| regulator of ribonuclease activity A [Yersinia pestis PY-93]
gi|391720945|gb|EIT50930.1| regulator of ribonuclease activity A [Yersinia pestis PY-100]
gi|391734705|gb|EIT62945.1| regulator of ribonuclease activity A [Yersinia pestis PY-103]
Length = 144
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 89/142 (62%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNP 84
++P+F +G R F G I T+K FEDN L+ + LEE G GRVLVVDGGGS+R A++
Sbjct: 2 VEPLFSNFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGRVLVVDGGGSVRRALINAEL 61
Query: 85 VVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRI 144
A N W GIVV G +R VD++ DIG++A+A+ P+ A +G+GE + + GG
Sbjct: 62 AELALKNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGAADEGVGESDIRVNFGGVTF 121
Query: 145 SDGEWLYADTDGILISRAELSV 166
G+ LYAD GI++S L +
Sbjct: 122 FSGDHLYADNTGIILSEDPLDI 143
>gi|170724896|ref|YP_001758922.1| ribonuclease activity regulator protein RraA [Shewanella woodyi
ATCC 51908]
gi|169810243|gb|ACA84827.1| regulator of ribonuclease activity A [Shewanella woodyi ATCC 51908]
Length = 161
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD ++ ++P+F YG F G I T+K FEDN LI E L+ G G
Sbjct: 4 NTSELCDTYIDVV-----DVVEPMFSNYGGCNSFGGSISTIKCFEDNGLIIEALQNDGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDGGGSLR A++ + A +N W GI+V G +RDVD + DIG++A+AS P+
Sbjct: 59 RVLLVDGGGSLRRALIDASIAQVAVDNNWEGIIVYGSVRDVDALEDLDIGIQAMASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GE +P+ GG + +YAD GI++S L +
Sbjct: 119 ADSNSVGELEIPVNFGGVTFLPLDHVYADNTGIILSPEPLDI 160
>gi|383824290|ref|ZP_09979474.1| ribonuclease activity regulator protein RraA [Mycobacterium xenopi
RIVM700367]
gi|383337563|gb|EID15939.1| ribonuclease activity regulator protein RraA [Mycobacterium xenopi
RIVM700367]
Length = 162
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 93/140 (66%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F +G R+ F+GP+ T++ F+DN L++ L E G+G VLV+DG GSL A++
Sbjct: 18 DVRSCDVQFHQFGGRRQFAGPVSTVRCFQDNALVKAVLSEPGDGGVLVIDGAGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++NGWAG+VV+G +RD + DIG++AL ++P K+ K G GE+ V I +G
Sbjct: 78 GDVIAELARSNGWAGLVVHGAVRDTARLRVIDIGIKALGTNPRKSAKTGAGERDVAIDLG 137
Query: 141 GTRISDGEWLYADTDGILIS 160
G G+ LY+D DGI+++
Sbjct: 138 GVTFVPGDVLYSDDDGIVVT 157
>gi|91226804|ref|ZP_01261457.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
12G01]
gi|269965799|ref|ZP_06179895.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
40B]
gi|91188935|gb|EAS75219.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
12G01]
gi|269829597|gb|EEZ83835.1| ribonuclease activity regulator protein RraA [Vibrio alginolyticus
40B]
Length = 160
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDQVSLLTLPLQNFGQRSAFYGEIVTVRCYHDNSKVREVLGEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G IRDV +I+ DIGV+AL ++P K
Sbjct: 60 VLIVDGHGSCQRALLGDQLAILGIENGWEGIIVYGAIRDVAQISQMDIGVQALGTNPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+GIGE +V +T+ + ++YAD +G+LIS+ +L
Sbjct: 120 EKRGIGEVNVTLTMQNQIVQPKHYVYADWNGVLISKQKLD 159
>gi|417839673|ref|ZP_12485846.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M19107]
gi|341952039|gb|EGT78582.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M19107]
Length = 163
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESTAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|227548549|ref|ZP_03978598.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium lipophiloflavum DSM 44291]
gi|227079378|gb|EEI17341.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium lipophiloflavum DSM 44291]
Length = 160
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L + F YG F G IVT+K F+DN L+++ L GNGRVLVVDG G L A++
Sbjct: 15 QLASCDTQFTNYGGHTEFCGEIVTIKCFQDNGLVKKTLNSPGNGRVLVVDGHGGLHTALM 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G +NGWAG+V+NG IRD E+ G +AL ++P K+NK G GE +V +T G
Sbjct: 75 GDMIAQAGVDNGWAGVVINGAIRDSAEVAKMPFGCKALGTNPRKSNKDGAGEVNVQVTFG 134
Query: 141 GTRISDGEWLYADTDGILIS 160
G G +LYAD DG++++
Sbjct: 135 GVVFHPGHFLYADADGVVVT 154
>gi|357019129|ref|ZP_09081386.1| ribonuclease activity regulator protein RraA [Mycobacterium
thermoresistibile ATCC 19527]
gi|356481080|gb|EHI14191.1| ribonuclease activity regulator protein RraA [Mycobacterium
thermoresistibile ATCC 19527]
Length = 166
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 88/139 (63%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ Q YG R F+GPI T++ F+DN L++ L E GNG VLV+DG GSL A++
Sbjct: 18 DVRSCDLQLQQYGGRAQFAGPISTVRCFQDNALLKSVLSEPGNGGVLVIDGDGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A+ NGWAG+++NG +RD + DIG++AL ++P K+ K G G++ V + G
Sbjct: 78 GDVIAELARGNGWAGLIINGAVRDSATLRTLDIGIKALGTNPRKSTKTGAGQRDVAVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G GE YAD DGI++
Sbjct: 138 GVTFVPGEIAYADEDGIVV 156
>gi|312881695|ref|ZP_07741472.1| ribonuclease activity regulator protein RraA [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370585|gb|EFP98060.1| ribonuclease activity regulator protein RraA [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 161
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L +G++ FSG IVT++ + DN ++RE L +KG G+
Sbjct: 5 TPDLCDK-----YEDDVTLLDLALHSFGKKDAFSGQIVTVRCYHDNSMVREALSDKGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DG GS + ++LG A N W G++VNG +RDV ++G IG++AL + P K
Sbjct: 60 VLVIDGHGSCQKSLLGDQLAELAIKNHWEGVIVNGAVRDVGALSGMKIGIQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +TI I G+++YAD +G+L+S EL +
Sbjct: 120 EKRGAGDINVTLTIHDQMIQPGDYIYADWNGVLMSNKELKI 160
>gi|417951353|ref|ZP_12594458.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
ATCC 33789]
gi|342804959|gb|EGU40245.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
ATCC 33789]
Length = 161
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE LE G+G+
Sbjct: 5 TPDLCDE-----FESKVTLLNLPLQNFGQRGAFWGKIVTVRCYHDNSKVREVLETDGSGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G++VNG +RDV ++ D+GV+AL + P K
Sbjct: 60 VLVVDGNGSCQKALLGDQLAILAIENGWEGVIVNGAVRDVGMMSQMDLGVQALGASPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K+G+G+ +V +T+ I G+++YAD +G+LIS
Sbjct: 120 EKRGVGQVNVTLTVHNQLIQPGDYIYADWNGVLIS 154
>gi|385650864|ref|ZP_10045417.1| ribonuclease activity regulator protein RraA [Leucobacter
chromiiresistens JG 31]
Length = 156
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA ++TA++ D ELR++ Q G F+GP+ TL+ F+DN LIR+ L
Sbjct: 1 MAQISTADLYDER-----GSELRSVSLQLQNIGGMTGFTGPVRTLRCFQDNALIRQTLSS 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G+G VLV+DGGGSL A++G A +NGWAG++V+G IRD I GV+AL S
Sbjct: 56 DGHGAVLVIDGGGSLETALVGDQIAELACDNGWAGLIVHGAIRDRVAIGTLPFGVKALGS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE VP+ IGG G ++ D DGIL+
Sbjct: 116 NPAKSTKTGAGEVDVPVEIGGVEFRPGVTVWCDEDGILV 154
>gi|157375121|ref|YP_001473721.1| ribonuclease activity regulator protein RraA [Shewanella sediminis
HAW-EB3]
gi|157317495|gb|ABV36593.1| regulator of ribonuclease activity A [Shewanella sediminis HAW-EB3]
Length = 164
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 97/158 (61%), Gaps = 2/158 (1%)
Query: 11 DANPQLI--VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLV 68
D P L +GEL L F+ YG+R++F G +VT+K FEDN +++ L +G G+VLV
Sbjct: 3 DLLPDLFDHFAGELSLLSAKFKQYGKREIFWGEVVTIKCFEDNSKVKQILATEGKGKVLV 62
Query: 69 VDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKK 128
VDG S+ A+LG + A +NGW G+V+NGC+RDV + D+G++AL ++P+K K
Sbjct: 63 VDGDASMDRALLGDLITLSAVDNGWEGVVINGCVRDVGALKKMDLGIKALGANPIKTVKL 122
Query: 129 GIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
GE ++ + + I G LY+D +GI I+ L +
Sbjct: 123 DQGEVNISLEMDSVIIEPGMMLYSDENGIAIAPKALDL 160
>gi|403528999|ref|YP_006663886.1| ribonuclease activity A regulator [Arthrobacter sp. Rue61a]
gi|403231426|gb|AFR30848.1| regulator of ribonuclease activity A [Arthrobacter sp. Rue61a]
Length = 157
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++ D + EL ++ FQ G FSGP+ T++ FEDN L++ L G+
Sbjct: 5 VNTADLYDDRGE-----ELESIAIQFQNLGGHTHFSGPVRTIRCFEDNALVKTVLSTPGD 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLV+DG GSLR A++G A NGWAG+V+NG IRD + I +GV+AL S+P
Sbjct: 60 GAVLVIDGQGSLRTALMGDMIAESAVANGWAGVVINGAIRDREAIARLPLGVKALGSNPK 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K+ K G+GE V + I RI G ++ D DGILI R
Sbjct: 120 KSAKTGVGEVDVQLVIDRVRIQPGVMIFCDADGILIER 157
>gi|342903603|ref|ZP_08725412.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M21621]
gi|341954954|gb|EGT81420.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M21621]
Length = 165
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDVELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|443670863|ref|ZP_21135989.1| putative ribonuclease regulator [Rhodococcus sp. AW25M09]
gi|443416605|emb|CCQ14326.1| putative ribonuclease regulator [Rhodococcus sp. AW25M09]
Length = 159
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 91/138 (65%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F +G+ F GPI T++ F+DN+L+++ L E GNG VLVVDG S+ A++
Sbjct: 20 DIRSCDTQFIQFGKHTEFVGPITTIRCFQDNLLVKQTLSEPGNGGVLVVDGDASVHTALV 79
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + NGWAG++VNG +RD + +IGV+AL ++P K+ + G GEK+VP+T G
Sbjct: 80 GDIIAGRGVTNGWAGVIVNGAVRDSAILRTLEIGVKALGTNPRKSTQTGSGEKNVPVTFG 139
Query: 141 GTRISDGEWLYADTDGIL 158
G + GE +Y+D DG++
Sbjct: 140 GVTFNPGEIVYSDHDGVV 157
>gi|262395228|ref|YP_003287082.1| ribonuclease E inhibitor RraA [Vibrio sp. Ex25]
gi|451975540|ref|ZP_21926727.1| ribonuclease E inhibitor RraA [Vibrio alginolyticus E0666]
gi|262338822|gb|ACY52617.1| ribonuclease E inhibitor RraA [Vibrio sp. Ex25]
gi|451930523|gb|EMD78230.1| ribonuclease E inhibitor RraA [Vibrio alginolyticus E0666]
Length = 160
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 97/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDQVTLLTLPLQNFGQRTAFYGEIVTVRCYHDNSKVREVLGEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G IRDV +I+ DIGV+AL ++P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAIRDVAQISQMDIGVQALGTNPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G+GE +V +T+ + ++YAD +G+LIS+ +L
Sbjct: 120 EKRGMGEVNVTLTMQNQIVQPKHYVYADWNGVLISKQKLD 159
>gi|322513842|ref|ZP_08066924.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Actinobacillus ureae ATCC 25976]
gi|322120329|gb|EFX92268.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Actinobacillus ureae ATCC 25976]
Length = 160
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 96/164 (58%), Gaps = 6/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M TA++CD P +L + F+++G R+ F G I T++ DNVLI++ +
Sbjct: 2 MKNFQTADLCDKFP------DLASCVTDFKLFGLRKRFYGKIRTVRCHLDNVLIQQLVNM 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
NG VLV+DG GS A++G A NNGWAGI++ G IRD IN D G++AL +
Sbjct: 56 PSNGEVLVIDGHGSRLTALMGDRLAQTAMNNGWAGIIIYGAIRDSVAINEMDFGIKALGT 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+P K+ K GIGE + ++ G + +LY+D DGI++S + L
Sbjct: 116 NPKKSAKVGIGEVDISVSFGNVVFTPNHYLYSDEDGIIVSESAL 159
>gi|119964128|ref|YP_949520.1| ribonuclease activity regulator protein RraA [Arthrobacter
aurescens TC1]
gi|119950987|gb|ABM09898.1| putative regulator of ribonuclease activity A [Arthrobacter
aurescens TC1]
Length = 157
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++ D + EL ++ F G R FSGP+ T++ FEDN L++ L G+
Sbjct: 5 VNTADLYDDRGE-----ELESIAIQFHNLGGRTHFSGPVRTIRCFEDNALVKTILNTPGD 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLV+DG GSLR A++G A NGWAG+V+NG IRD + I +GV+AL S+P
Sbjct: 60 GAVLVIDGQGSLRTALMGDMIAESAVANGWAGVVINGAIRDREAIARLPLGVKALGSNPK 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K+ K G+GE V + I RI G ++ D DGILI R
Sbjct: 120 KSAKTGVGEVDVQLVIDRVRIQPGVMIFCDPDGILIER 157
>gi|407794655|ref|ZP_11141679.1| ribonuclease activity regulator protein RraA [Idiomarina
xiamenensis 10-D-4]
gi|407211028|gb|EKE80898.1| ribonuclease activity regulator protein RraA [Idiomarina
xiamenensis 10-D-4]
Length = 161
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD P ++ ++P+F YG R F G +VT+K FED LI E +++ G G+
Sbjct: 5 TSELCDLYPDMV-----DVVEPMFVHYGGRSSFGGQLVTIKCFEDKGLIEELVQQAGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A++ QA +N W GI+ G +RDVD ++ D+G+ ALA+ P+ A
Sbjct: 60 VLLIDGGGSSRRALIDIGIAEQALDNDWEGIICYGAVRDVDALDELDLGIMALAAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ G+GE + + G + +YAD+ GI++S L +
Sbjct: 120 DNAGVGEADIAVNFAGVTFLPEDHVYADSTGIVLSAEPLDI 160
>gi|407278632|ref|ZP_11107102.1| ribonuclease activity regulator protein RraA [Rhodococcus sp. P14]
Length = 164
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F +G +VF+G I T++ F+DN+L+++ L E GNG VLVVDG S+ A++
Sbjct: 22 DIRSCDTQFIQFGGHEVFAGRITTIRCFQDNLLVKQTLSEPGNGGVLVVDGDASVHTALV 81
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + +NGWAG+VVNG +RD + IG++AL ++P K+ + G GEK+VP+ G
Sbjct: 82 GDIIAGRGVDNGWAGVVVNGAVRDSAILRTLGIGIKALGTNPRKSTQTGSGEKNVPVEFG 141
Query: 141 GTRISDGEWLYADTDGILISRAE 163
G + GE LY+D DGI++ RAE
Sbjct: 142 GVTFNPGEMLYSDHDGIVV-RAE 163
>gi|451337153|ref|ZP_21907701.1| Ribonuclease E inhibitor RraA [Amycolatopsis azurea DSM 43854]
gi|449420112|gb|EMD25614.1| Ribonuclease E inhibitor RraA [Amycolatopsis azurea DSM 43854]
Length = 161
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++ D + LR F+ +G + FSGPI T+ EDN L+++ L G G
Sbjct: 6 TTADLVDEHGD-----RLRVCDTQFRQFGGHRKFSGPIRTVSCHEDNGLVKKLLNTPGEG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLVVDGGGSL A+ G A +N WAG+VV+G +RD E+ G +GV+AL ++P K
Sbjct: 61 SVLVVDGGGSLHSALTGDMIAKSAVDNCWAGVVVHGAVRDSAELAGLPLGVKALGTNPRK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
++K G+G VP+ GG + G+ LY+D DG++I
Sbjct: 121 SSKAGVGAVDVPVGFGGVTFTPGDTLYSDDDGVVI 155
>gi|416893133|ref|ZP_11924419.1| ribonuclease activity regulator protein RraA [Aggregatibacter
aphrophilus ATCC 33389]
gi|347814161|gb|EGY30811.1| ribonuclease activity regulator protein RraA [Aggregatibacter
aphrophilus ATCC 33389]
Length = 166
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G I T+K FE+N LI + LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGLSSFHGKITTVKCFENNGLIADLLEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +N W GI+V G +R + ++ DIG++ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNNWEGIIVYGAVRQIQQLENIDIGIQALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE VP+ GG +++YAD GI++S+ L +
Sbjct: 118 GADEGNHGETDVPVNFGGVTFFPEDYVYADLTGIILSQEPLDL 160
>gi|452959032|gb|EME64373.1| ribonuclease activity regulator protein RraA [Rhodococcus ruber BKS
20-38]
Length = 164
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F +G +VF+G I T++ F+DN+L+++ L E GNG VLVVDG S+ A++
Sbjct: 22 DIRSCDTQFIQFGGHEVFAGRITTIRCFQDNLLVKQTLSEPGNGGVLVVDGDASVHTALV 81
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + +NGWAG+VVNG +RD + IG++AL ++P K+ + G GEK+VP+ G
Sbjct: 82 GDIIAGRGVDNGWAGVVVNGAVRDSAILRTLGIGIKALGTNPRKSTQTGSGEKNVPVEFG 141
Query: 141 GTRISDGEWLYADTDGILISRAE 163
G + GE LY+D DGI++ RAE
Sbjct: 142 GVTFNPGEMLYSDHDGIVV-RAE 163
>gi|359441049|ref|ZP_09230954.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20429]
gi|358037062|dbj|GAA67203.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20429]
Length = 163
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIRE L + G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIRELLSQDGTD 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VL++DGGGS R A++ A N W GIVV G +R VDE+ D+G++A+AS P+
Sbjct: 59 LVLLIDGGGSTRRALIDIELAELALENNWNGIVVYGAVRHVDELEELDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +G GE + + G D +++YAD+ GI++S EL V
Sbjct: 119 ADSEGAGEDAIGVNFAGVSFFDDDFIYADSTGIVLSAEELEV 160
>gi|350553749|ref|ZP_08922911.1| Regulator of ribonuclease activity A [Thiorhodospira sibirica ATCC
700588]
gi|349789975|gb|EGZ43903.1| Regulator of ribonuclease activity A [Thiorhodospira sibirica ATCC
700588]
Length = 161
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPI-FQIYGRRQVFSGPIVTLKVFEDNVLIREFLE 59
M+ T ++CDA+P+ + +A+ + ++ +G R F G I T+K FEDN I+E L
Sbjct: 1 MSDFVTCDLCDAHPE-----DAQAITGVAWRSFGGRVRFHGQIETVKCFEDNSRIKELLA 55
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
G G+VLVVDGGGSLR A+LG A GW G+++ G RDV+ + DIG+ AL
Sbjct: 56 TPGKGKVLVVDGGGSLRRALLGDLIAAAAVRQGWEGVILFGACRDVEVLATLDIGIFALG 115
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ P+K +++G G++H+PI I G I G+++YAD +G++ + L
Sbjct: 116 AVPLKTDRRGEGQQHLPIHIAGQPIRPGDFVYADPNGVITAPKAL 160
>gi|33151417|ref|NP_872770.1| ribonuclease activity regulator protein RraA [Haemophilus ducreyi
35000HP]
gi|37088068|sp|P59885.1|RRAA_HAEDU RecName: Full=Regulator of ribonuclease activity A
gi|33147637|gb|AAP95159.1| S-adenosylmethionine: 2-demethylmenaquinone methyltransferase
[Haemophilus ducreyi 35000HP]
Length = 165
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE+N LI E LEE+G
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGASSFYGKITTVKCFENNGLIAEVLEEEGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALIDAELAKLAVDNGWQGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A IGE P+ GG +++YAD GI++S
Sbjct: 118 GAEDADIGEVDTPVNFGGVTFFPEDYVYADLTGIILS 154
>gi|417845340|ref|ZP_12491370.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M21639]
gi|341955377|gb|EGT81834.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M21639]
Length = 165
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGSVSHFYGKVTTVKCFESNGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
RVLV+DGGG +R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EDRVLVIDGGGVVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE VP+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESSAGESDVPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|387769222|ref|ZP_10125488.1| regulator of ribonuclease activity A [Pasteurella bettyae CCUG
2042]
gi|386907178|gb|EIJ71893.1| regulator of ribonuclease activity A [Pasteurella bettyae CCUG
2042]
Length = 166
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 100/163 (61%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE N LI E LEE+G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGVSEFYGKVTTVKCFEQNGLIAEILEEQGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ + A +NGW GI+V G +R + ++ +IG++ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDADLAQLAADNGWEGIIVYGAVRQLSQLENINIGIQALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADENNQGESDIPVNFGGVTFFPEDYVYADLTGIILSQEVLEL 160
>gi|254361219|ref|ZP_04977363.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mannheimia haemolytica PHL213]
gi|452745189|ref|ZP_21945026.1| ribonuclease activity regulator protein RraA [Mannheimia
haemolytica serotype 6 str. H23]
gi|153092710|gb|EDN73759.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mannheimia haemolytica PHL213]
gi|452086799|gb|EME03185.1| ribonuclease activity regulator protein RraA [Mannheimia
haemolytica serotype 6 str. H23]
Length = 165
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD + S ++ ++PIF +G F G I T+K FE N LI E LEE+G
Sbjct: 3 IDTSALCD-----LYSDQVDVVEPIFSSFGGASSFFGKITTVKCFESNGLIAEVLEEEGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDILERLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ IGE P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADNTDIGEVDTPVNFGGVTFFPEDYVYADLTGIILSQELLDL 160
>gi|114326727|ref|YP_743884.1| ribonuclease activity regulator protein RraA [Granulibacter
bethesdensis CGDNIH1]
gi|114314901|gb|ABI60961.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Granulibacter bethesdensis CGDNIH1]
Length = 171
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + TA++ DA + S ++ F YG + FSGP+ T++ +EDN LI+ L
Sbjct: 10 MVVFATADLVDAYQDRLGSCFIQ-----FASYGGQARFSGPVRTIRTYEDNALIKATLSS 64
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G VLV+DGGGSLR A++G A NGW GIV G +RD + IG++AL +
Sbjct: 65 PGQGAVLVIDGGGSLRSALVGDVIAGLAVTNGWVGIVAWGVVRDSVALKTLPIGIKALGT 124
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+P K+ K G G P++ GG + G+W+YAD DG+L+S
Sbjct: 125 NPWKSGKAGSGVLDEPVSFGGVTFATGDWVYADEDGLLVS 164
>gi|197287027|ref|YP_002152899.1| ribonuclease activity regulator protein RraA [Proteus mirabilis
HI4320]
gi|227354728|ref|ZP_03839146.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Proteus mirabilis ATCC 29906]
gi|425070389|ref|ZP_18473502.1| RraA family protein [Proteus mirabilis WGLW6]
gi|425070699|ref|ZP_18473805.1| RraA family protein [Proteus mirabilis WGLW4]
gi|226703229|sp|B4F169.1|RRAA_PROMH RecName: Full=Regulator of ribonuclease activity A
gi|194684514|emb|CAR46296.1| regulator of ribonuclease activity [Proteus mirabilis HI4320]
gi|227165171|gb|EEI49999.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Proteus mirabilis ATCC 29906]
gi|404594686|gb|EKA95242.1| RraA family protein [Proteus mirabilis WGLW6]
gi|404599524|gb|EKA99976.1| RraA family protein [Proteus mirabilis WGLW4]
Length = 172
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I T+K FEDN L+ + LEE G R
Sbjct: 5 TSELCD-----IYQEDINVVEPLFSNFGGRSSFGGQITTVKCFEDNGLLYDLLEENGKDR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L+VDGGGS+R A++ A N W GIVV G +R VD ++ D+G++A+A+ P
Sbjct: 60 ILLVDGGGSVRKALVDAELAQLAVLNEWEGIVVYGAVRQVDALSELDLGIQAMAAIPAGC 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+GIG+ + + GG G++LYAD GI++S L
Sbjct: 120 PSEGIGDSDIRVNFGGVTFFSGDYLYADNTGIILSEEPL 158
>gi|343492154|ref|ZP_08730527.1| ribonuclease activity regulator protein RraA [Vibrio
nigripulchritudo ATCC 27043]
gi|342827494|gb|EGU61882.1| ribonuclease activity regulator protein RraA [Vibrio
nigripulchritudo ATCC 27043]
Length = 161
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 92/146 (63%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L L Q +G+R F G IVT++ + DN ++E L E G G+VLVVDG GS A++
Sbjct: 15 QLTLLDLPLQNFGQRGAFWGEIVTVRCYHDNSKVKEALNENGKGKVLVVDGNGSSERALM 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + A NN W G+V+ G +RDV ++ D+GV+AL + P K K+ IGE V +TI
Sbjct: 75 GDQVALTAINNQWEGVVIWGAVRDVGAMSEMDLGVKALTTCPFKTEKRDIGEIDVGLTIQ 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G I G++LY+D +GI+IS+ EL V
Sbjct: 135 GQMIQPGDYLYSDWNGIVISKKELKV 160
>gi|417842455|ref|ZP_12488540.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M21127]
gi|341951667|gb|EGT78229.1| Regulator of ribonuclease activity A [Haemophilus haemolyticus
M21127]
Length = 165
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T+E+CD + + ++ ++PIF +G F G + T+K FE + LI E LEE G
Sbjct: 2 FIDTSELCD-----LYAEQVDVVEPIFSSFGGVSNFYGKVTTVKCFESSGLIAEVLEENG 56
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P
Sbjct: 57 EGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ A++ GE VP+ GG +++YAD GI++S+ L +
Sbjct: 117 VSADESTAGESDVPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|261253872|ref|ZP_05946445.1| ribonuclease E inhibitor RraA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417954607|ref|ZP_12597640.1| ribonuclease activity regulator protein RraA [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937263|gb|EEX93252.1| ribonuclease E inhibitor RraA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342815153|gb|EGU50080.1| ribonuclease activity regulator protein RraA [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 161
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 100/155 (64%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + + L AL P+ +GR+ F G IVT++ + DN +RE L + G G+
Sbjct: 5 TPDICDKHEDKVT---LLAL-PLHS-FGRKLAFYGEIVTVRCYHDNSKVREMLSQDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A +N W G++VNG +RDV ++ ++G++AL ++P K
Sbjct: 60 VLVVDGHGSCQRALLGDQLAILAIDNNWEGVIVNGAVRDVAAMSEMELGIKALGTNPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K+G+GE +V +TI I G+++YAD +G+L+S
Sbjct: 120 EKRGVGEINVTLTIHNQMIQPGDYIYADWNGVLMS 154
>gi|375131923|ref|YP_004994023.1| Regulator of ribonuclease activity A protein 1 [Vibrio furnissii
NCTC 11218]
gi|315181097|gb|ADT88011.1| Regulator of ribonuclease activity A protein 1 [Vibrio furnissii
NCTC 11218]
Length = 161
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L+ Q +G R F G IVT++ + DN ++E L + G G+
Sbjct: 5 TPDICDQ-----YESQVTLLELPLQNFGMRSAFWGQIVTVRCYHDNSKVKEMLSQNGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A++G + A N W G+++NG +RDV ++ D+G++AL + P K
Sbjct: 60 VLVVDGHGSCQKALMGDQIAISAIENEWEGVIINGAVRDVVAMSQMDLGIKALGACPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +TI I G++LYAD +G+L+S EL++
Sbjct: 120 EKRGAGDVNVTLTIHNQMIQPGDYLYADWNGVLLSPVELTL 160
>gi|307128946|ref|YP_003880962.1| ribonuclease E (RNase E) inhibitor protein [Dickeya dadantii 3937]
gi|306526475|gb|ADM96405.1| ribonuclease E (RNase E) inhibitor protein [Dickeya dadantii 3937]
Length = 161
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LEE G+GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRSSFGGKIITVKCFEDNGLLFDVLEENGSGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD+++ DIG++A+A+ P A
Sbjct: 60 VLLVDGGGSVRRALVNAELARLATQNEWEGIVVYGAVRQVDDLSELDIGIQAMAATPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ASEGIGETDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDL 160
>gi|449471363|ref|XP_004153287.1| PREDICTED: regulator of ribonuclease activity A-like [Cucumis
sativus]
Length = 172
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 98/172 (56%), Gaps = 16/172 (9%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLI----------- 54
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEENGRGL 59
Query: 55 REFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIG 114
+ LEE G GRVLVVDGGGS+R A++ A N W GIVV G +R VD++ DIG
Sbjct: 60 SDLLEENGRGRVLVVDGGGSVRRALIDAELAGIAVQNEWEGIVVYGSVRQVDDLEDMDIG 119
Query: 115 VRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++A+A+ P+ A GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 IQAIAAIPVGAAGDGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 171
>gi|443493427|ref|YP_007371574.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase, MenG
[Mycobacterium liflandii 128FXT]
gi|442585924|gb|AGC65067.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase, MenG
[Mycobacterium liflandii 128FXT]
Length = 165
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 91/142 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G R +GPI T++ F+DN L++ L + G G VLV+DG GSL A++
Sbjct: 19 DVRSCDLQFRQFGGRAELAGPISTVRCFQDNALLKSVLSQPGEGGVLVIDGAGSLHTALV 78
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++NGWAG+VV+G +RD + G DIG++AL ++P K+ K G GE+ IT+G
Sbjct: 79 GDVIAELARSNGWAGLVVHGAVRDSAALRGIDIGIKALGTNPRKSTKTGSGERDAEITLG 138
Query: 141 GTRISDGEWLYADTDGILISRA 162
G GE Y+D DGI++ A
Sbjct: 139 GVTFVPGEIAYSDDDGIVVVAA 160
>gi|424512858|emb|CCO66442.1| ribonuclease activity regulator protein RraA [Bathycoccus prasinos]
Length = 248
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 5/144 (3%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL-EEKGNGRVLVVDGGGSLRCAILGGN 83
L+P + R F G I T+K FE+N L+RE L +E G RVLV+DGGGS RCA+LGG
Sbjct: 101 LKPYGGAFDRTSFFRGEITTIKCFENNPLVRETLTKESGVNRVLVIDGGGSRRCALLGGE 160
Query: 84 PVVQAQNNGWAGIVVNGCIRDVDEINGC--DIGVRALASHPMKANKK--GIGEKHVPITI 139
A+ N W GIVVNGCIRD +E+ C I + A+ + P+ ++K+ G+ + +T
Sbjct: 161 IAKIAEGNQWEGIVVNGCIRDTNEMRWCGLKIPILAVGTSPVPSSKRDPGVKDPKFGVTF 220
Query: 140 GGTRISDGEWLYADTDGILISRAE 163
GG G W+YAD DG+L++R +
Sbjct: 221 GGVNFKSGSWVYADCDGVLVTREK 244
>gi|271502452|ref|YP_003335478.1| regulator of ribonuclease activity A [Dickeya dadantii Ech586]
gi|270346007|gb|ACZ78772.1| regulator of ribonuclease activity A [Dickeya dadantii Ech586]
Length = 161
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G IVT+K FEDN L+ + LEE G+GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRSSFGGKIVTVKCFEDNGLLFDVLEENGSGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VD+++ DIG++A+A+ P A
Sbjct: 60 VLLIDGGGSVRRALVDAELARLATQNEWEGIVVYGAVRQVDDLSELDIGIQAMAATPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ASEGIGETDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDL 160
>gi|251787762|ref|YP_003002483.1| ribonuclease activity regulator protein RraA [Dickeya zeae Ech1591]
gi|247536383|gb|ACT05004.1| regulator of ribonuclease activity A [Dickeya zeae Ech1591]
Length = 161
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I+T+K FEDN L+ + LEE G+GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRSSFGGKIITVKCFEDNGLLFDVLEENGSGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIVV G +R VD+++ DIG++A+A+ P A
Sbjct: 60 VLLVDGGGSVRRALVDAELARLATQNEWEGIVVYGAVRQVDDLSELDIGIQAMAATPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ASEGIGETDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDL 160
>gi|108802019|ref|YP_642216.1| ribonuclease activity regulator protein RraA [Mycobacterium sp.
MCS]
gi|119871171|ref|YP_941123.1| ribonuclease activity regulator protein RraA [Mycobacterium sp.
KMS]
gi|122382266|sp|Q1B1S4.1|RRAAH_MYCSS RecName: Full=Putative regulator of ribonuclease activity
gi|166230392|sp|A1UNC5.1|RRAAH_MYCSK RecName: Full=Putative regulator of ribonuclease activity
gi|108772438|gb|ABG11160.1| Protein of unknown function 1935 [Mycobacterium sp. MCS]
gi|119697260|gb|ABL94333.1| regulator of ribonuclease activity A [Mycobacterium sp. KMS]
Length = 159
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 90/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ + +GRR F+G + T++ F+DN L++ L E G+G VLV+DG GSL A++
Sbjct: 18 DVRSCDLQLRQFGRRPEFAGRVTTVRCFQDNALLKSVLSEPGDGGVLVIDGDGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G ++NGW+G+++NG +RD + DIG++AL ++P K+ K G GE+ VP+ G
Sbjct: 78 GDVIAALGRDNGWSGLIINGAVRDASTLRTLDIGIKALGTNPRKSTKTGAGERDVPVDFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ Y+D DGI++
Sbjct: 138 GVTFTPGDVAYSDDDGIVV 156
>gi|387773667|ref|ZP_10128957.1| regulator of ribonuclease activity A [Haemophilus parahaemolyticus
HK385]
gi|386904408|gb|EIJ69202.1| regulator of ribonuclease activity A [Haemophilus parahaemolyticus
HK385]
Length = 165
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE N LI + LEE+GN
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGASSFCGQITTVKCFESNGLIEKVLEEEGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + +IG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDVLETLNIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ IGE P+ GG +++YAD GI++S L +
Sbjct: 118 GADNTEIGEIDTPVNFGGVTFFPEDYVYADLTGIILSPEALDL 160
>gi|421725634|ref|ZP_16164820.1| ribonuclease activity regulator protein RraA [Klebsiella oxytoca
M5al]
gi|410373561|gb|EKP28256.1| ribonuclease activity regulator protein RraA [Klebsiella oxytoca
M5al]
Length = 162
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 6/162 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G G
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDMLEQNGRGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA-SHPMK 124
VL+VDGGGS+R A++ + A N W G+VV G +R VD++ DIG++AL + P+
Sbjct: 60 VLLVDGGGSVRRALIDADLARLAVQNEWEGLVVYGAVRQVDDLEELDIGIQALGLAIPVG 119
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A +GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 161
>gi|429199906|ref|ZP_19191640.1| RraA family protein [Streptomyces ipomoeae 91-03]
gi|428664367|gb|EKX63656.1| RraA family protein [Streptomyces ipomoeae 91-03]
Length = 166
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+LR F YG + F+GP+ T+ EDN L+ L E G+G V+VVDGG SLR A+L
Sbjct: 18 QLRVCDMRFTSYGAVRSFAGPVRTVSCHEDNALLHTLLREPGDGAVVVVDGGASLRTALL 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G +A++NGWAG+V+ G +RD + +GVRAL ++P ++ K G GE P+T G
Sbjct: 78 GDLMAARARDNGWAGLVIRGAVRDAALLADVRVGVRALGANPRRSGKAGKGEVDAPVTFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ L+AD DG+++
Sbjct: 138 GVTFATGDILHADEDGVVL 156
>gi|359770555|ref|ZP_09274028.1| regulator of ribonuclease activity A [Gordonia effusa NBRC 100432]
gi|359312239|dbj|GAB16806.1| regulator of ribonuclease activity A [Gordonia effusa NBRC 100432]
Length = 160
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+A V TA++ D + ++R+ FQ YG + F G + T+K F+DN L++ L E
Sbjct: 4 LAFVPTADLVDD-----IGADVRSCDTQFQQYGGTREFVGRVTTVKCFQDNALLKSILSE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GIV NG IRD I IGV+AL +
Sbjct: 59 PNPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIVANGAIRDAAAIGQMAIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ VP+TIGG G+ LY+D DGI++
Sbjct: 119 NPRKSTKTGAGERDVPLTIGGETFQPGDLLYSDDDGIVL 157
>gi|410458025|ref|ZP_11311790.1| ribonuclease activity regulator protein RraA [Bacillus azotoformans
LMG 9581]
gi|409931960|gb|EKN68932.1| ribonuclease activity regulator protein RraA [Bacillus azotoformans
LMG 9581]
Length = 165
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD S + Q F+ YG ++ FSGPI T++VFEDNVL+R+ LE G
Sbjct: 9 TADLCDH-----YSDSISICQVEFKSYGAKKQFSGPIQTVEVFEDNVLVRQMLETIPEGS 63
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVV+GG S CA++G A + AGI+VNG IRD EI G +IGV A+ + P+K+
Sbjct: 64 VLVVNGGASRNCALVGDMLAQIAVDRKIAGIIVNGVIRDSGEIAGMNIGVFAIGTMPLKS 123
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V G + E++YAD DG+++S L++
Sbjct: 124 KKEGKGKTNVVTKFGSITWTPDEYVYADEDGVIVSPKLLTL 164
>gi|429734650|ref|ZP_19268657.1| regulator of ribonuclease activity A [Aggregatibacter
actinomycetemcomitans Y4]
gi|429151496|gb|EKX94362.1| regulator of ribonuclease activity A [Aggregatibacter
actinomycetemcomitans Y4]
Length = 166
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGLSSFHGKVTTVKCFENNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +N W GI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNQWEGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADNSSHGETDIPVNFGGVTFFPEDFVYADLTGIILSQVALDL 160
>gi|309783872|ref|ZP_07678517.1| regulator of ribonuclease activity A [Shigella dysenteriae 1617]
gi|308928243|gb|EFP73705.1| regulator of ribonuclease activity A [Shigella dysenteriae 1617]
Length = 143
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 89/142 (62%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNP 84
++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++
Sbjct: 1 MEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAEL 60
Query: 85 VVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRI 144
A N W G+V+ G + VD++ DIG++A+A+ P+ A +GIGE V + GG
Sbjct: 61 ARLAVQNEWEGLVIYGAVHQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTF 120
Query: 145 SDGEWLYADTDGILISRAELSV 166
G+ LYAD GI++S L +
Sbjct: 121 FSGDHLYADNTGIILSEDPLDI 142
>gi|84393241|ref|ZP_00992003.1| Demethylmenaquinone methyltransferase [Vibrio splendidus 12B01]
gi|84376147|gb|EAP93033.1| Demethylmenaquinone methyltransferase [Vibrio splendidus 12B01]
Length = 161
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE LE G+G+
Sbjct: 5 TPDLCDE-----FESKVTQLNMPLQNFGQRGAFWGKIVTVRCYHDNSKVREVLETDGSGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G++VNG +RDV + D+G++AL + P K
Sbjct: 60 VLVVDGNGSCQKALLGDQLAILAIENGWEGVIVNGAVRDVAMMAQMDLGIQALGASPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K G+G+ +V +T+ I G+++YAD +G+LIS
Sbjct: 120 EKHGVGQVNVTLTVHNQLIQPGDYIYADWNGVLIS 154
>gi|260912763|ref|ZP_05919249.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260633141|gb|EEX51306.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 166
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGASHFYGKVTTIKCFESNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGG++R A++ A +NGW GI++ G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLVVDGGGAVRRALIDAELAQLAVDNGWEGIIIYGAVRQIQQLENLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GE V + GG +++YAD GI++S+ L +
Sbjct: 118 AADDNNQGETDVAVNFGGVTFFPEDYVYADLTGIILSQEPLEL 160
>gi|260767350|ref|ZP_05876289.1| ribonuclease E inhibitor RraA [Vibrio furnissii CIP 102972]
gi|260617673|gb|EEX42853.1| ribonuclease E inhibitor RraA [Vibrio furnissii CIP 102972]
Length = 161
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L+ Q +G R F G IVT++ + DN ++E L + G G+
Sbjct: 5 TPDICDQ-----YESQVTLLELPLQNFGMRSAFWGQIVTVRCYHDNSKVKEILSQNGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A++G + A N W G+++NG +RDV ++ D+G++AL + P K
Sbjct: 60 VLVVDGHGSCQKALMGDQIAISAIENEWEGVIINGAVRDVVAMSQMDLGIKALGACPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +TI I G++LYAD +G+L+S EL++
Sbjct: 120 EKRGAGDVNVTLTIHNQMIQPGDYLYADWNGVLLSPVELTL 160
>gi|223041594|ref|ZP_03611793.1| ribonuclease activity regulator protein RraA [Actinobacillus minor
202]
gi|240950104|ref|ZP_04754399.1| ribonuclease activity regulator protein RraA [Actinobacillus minor
NM305]
gi|223017569|gb|EEF15981.1| ribonuclease activity regulator protein RraA [Actinobacillus minor
202]
gi|240295405|gb|EER46174.1| ribonuclease activity regulator protein RraA [Actinobacillus minor
NM305]
Length = 165
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE N LI + LEE+G
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGASSFCGKITTVKCFESNGLIADVLEEEGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A IGE P+ GG +++YAD GI++S L +
Sbjct: 118 GAEDTDIGEIDTPVNFGGVTFFPEDYIYADLTGIILSPERLDL 160
>gi|261868705|ref|YP_003256627.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|387121425|ref|YP_006287308.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415757857|ref|ZP_11481490.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|415769966|ref|ZP_11484581.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416031642|ref|ZP_11572582.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416050000|ref|ZP_11576816.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416106812|ref|ZP_11590061.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444345977|ref|ZP_21153975.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261414037|gb|ACX83408.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|347990995|gb|EGY32509.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|348001236|gb|EGY41988.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|348006014|gb|EGY46480.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348655353|gb|EGY70812.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348656999|gb|EGY74596.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|385875917|gb|AFI87476.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|443542216|gb|ELT52575.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 166
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGLSSFHGKVTTVKCFENNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +N W GI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNQWEGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADNSSHGETDIPVNFGGVTFFPEDFVYADLTGIILSQEALDL 160
>gi|409356544|ref|ZP_11234931.1| ribonuclease activity regulator protein RraA [Dietzia alimentaria
72]
Length = 160
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
V TA++ D + +R+ F+ G R F GPI T++ F+DN L++ L E G
Sbjct: 8 FVPTADLVDE-----IGEAVRSCDTQFRDLGGRTEFFGPISTIRCFQDNALLKSVLGEPG 62
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLV+DG GSL A++G ++NGWAG+VVNG IRD + D G +AL ++P
Sbjct: 63 EGRVLVIDGEGSLHTALVGDIIAELGRSNGWAGVVVNGAIRDSALVQQMDFGCKALGTNP 122
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ K G GE+ V + +GG G+ LYAD+DGI++
Sbjct: 123 RKSTKTGAGERDVTVNLGGVDFVPGDMLYADSDGIVV 159
>gi|336451061|ref|ZP_08621507.1| regulator of ribonuclease activity A [Idiomarina sp. A28L]
gi|336282317|gb|EGN75555.1| regulator of ribonuclease activity A [Idiomarina sp. A28L]
Length = 161
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + ++ ++P+F YG R F G +VT+K ED LI LE+ G G+
Sbjct: 5 TSELCD-----LYADQIDVVEPMFANYGGRSSFGGQVVTVKCHEDKGLIETALEQPGAGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ A N W GIV GC+RDVD I DIG++A+AS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDIAIAELALENEWEGIVCYGCVRDVDLIEDLDIGIQAIASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ GIGE + + GG + +YAD+ GI++S L +
Sbjct: 120 DIAGIGETDIAVNFGGVTFLPEDHIYADSTGIILSPEALDI 160
>gi|453379557|dbj|GAC85656.1| ribonuclease regulator [Gordonia paraffinivorans NBRC 108238]
Length = 162
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T+K F+DN L++ L E
Sbjct: 4 LTFTPTADLVDE-----IGADVRSCDTQFTQYGGNREFVGRVTTVKCFQDNALLKSVLSE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG S+ A++G ++NGW GI++NG IRD I G IGV+AL +
Sbjct: 59 SNPGGVLVVDGDASVHTALVGDVIAELGRSNGWVGIIINGAIRDAKTIGGMAIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+P K+ K G GE+ VP+TIGG + G+ +Y+D DGI+I E
Sbjct: 119 NPRKSTKTGAGERDVPLTIGGETFNPGDIVYSDDDGIVIVSPE 161
>gi|365966459|ref|YP_004948021.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|416067597|ref|ZP_11582341.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|416076375|ref|ZP_11585456.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|416091186|ref|ZP_11588209.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348001974|gb|EGY42697.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348004979|gb|EGY45469.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348009051|gb|EGY49247.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|365745372|gb|AEW76277.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 166
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGLSSFHGKVTTVKCFENNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +N W GI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNQWEGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADNSNHGETDIPVNFGGVTFFPEDFVYADLTGIILSQEALDL 160
>gi|420338286|ref|ZP_14839842.1| regulator of ribonuclease activity A [Shigella flexneri K-315]
gi|391258400|gb|EIQ17499.1| regulator of ribonuclease activity A [Shigella flexneri K-315]
Length = 143
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 89/142 (62%)
Query: 25 LQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNP 84
++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++
Sbjct: 1 MEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAEL 60
Query: 85 VVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRI 144
A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GI E V + GG
Sbjct: 61 ARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGISESDVRVNFGGVTF 120
Query: 145 SDGEWLYADTDGILISRAELSV 166
G+ LYAD GI++S L +
Sbjct: 121 FSGDHLYADNTGIILSEDPLDI 142
>gi|410696518|gb|AFV75586.1| RraA family protein [Thermus oshimai JL-2]
Length = 162
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA++ D P E L + + +G R F G + TL+V EDN+L+R LEE G
Sbjct: 4 TTADLSDRFP------EAPYLPGLLKDFGGRARFFGRVRTLRVLEDNLLVRRVLEE--GG 55
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLV+DGGGSLR A+LGGN A G+ G+VV+G +RD E+ +GV+AL + P K
Sbjct: 56 EVLVIDGGGSLRTALLGGNLARLALERGFRGVVVHGAVRDAAELRTLPLGVKALGTTPKK 115
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+ K G+GE VP+ G R+ G++L AD DG+L+ A S
Sbjct: 116 SAKAGVGEVDVPVEFLGLRVLPGQFLVADEDGLLLLPAPPS 156
>gi|421786192|ref|ZP_16222602.1| regulator of ribonuclease activity A [Serratia plymuthica A30]
gi|407751655|gb|EKF61828.1| regulator of ribonuclease activity A [Serratia plymuthica A30]
Length = 146
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 89/145 (61%)
Query: 22 LRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILG 81
+ ++P+F +G R F G I T+K FEDN L+ + LEE G GRVL++DGGGS+R A++
Sbjct: 1 MNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLFDLLEENGRGRVLLIDGGGSVRRALIN 60
Query: 82 GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGG 141
A N W GIVV G +R V+++ DIG++A+A+ P A +G+GE + + GG
Sbjct: 61 AELARLATQNEWEGIVVYGAVRQVEDLEELDIGIQAMAAIPAGAISEGVGESDIRVNFGG 120
Query: 142 TRISDGEWLYADTDGILISRAELSV 166
G+ LYAD GI++S L +
Sbjct: 121 VTFFSGDHLYADNTGIILSEDPLDI 145
>gi|261493035|ref|ZP_05989576.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496689|ref|ZP_05993068.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|261307658|gb|EEY08982.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311312|gb|EEY12474.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 165
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD + S ++ ++PIF +G F G I T+K FE N LI + LEE+G
Sbjct: 3 IDTSALCD-----LYSDQVDVVEPIFSSFGGASSFFGKITTVKCFESNGLIADVLEEEGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDILERLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ IGE P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADNTDIGEVDTPVNFGGVTFFPEDYIYADLTGIILSQELLDL 160
>gi|383815794|ref|ZP_09971202.1| ribonuclease activity regulator protein RraA [Serratia sp. M24T3]
gi|383295372|gb|EIC83698.1| ribonuclease activity regulator protein RraA [Serratia sp. M24T3]
Length = 161
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A+L A N W GIV+ G +R VD++ DIG++A+A+ P A
Sbjct: 60 VLLVDGGGSVRRALLDAGLANLALQNEWEGIVIYGAVRQVDDLEELDIGIQAMAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE + + GG G+ LYAD GI++S L +
Sbjct: 120 ASEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|423418772|ref|ZP_17395861.1| RraA family protein [Bacillus cereus BAG3X2-1]
gi|401105378|gb|EJQ13345.1| RraA family protein [Bacillus cereus BAG3X2-1]
Length = 161
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLREGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGIVALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DG+++S L
Sbjct: 119 VKEGKGERNIPVQFGEVEWKPNEYVYVDEDGVIVSDKSL 157
>gi|315634787|ref|ZP_07890069.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Aggregatibacter segnis ATCC 33393]
gi|315476339|gb|EFU67089.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Aggregatibacter segnis ATCC 33393]
Length = 166
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++P+F +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPVFSSFGGLSSFYGKVTTVKCFENNGLIAEILEENGQ 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGG++R A++ A +N W GI++ G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLVVDGGGAVRRALIDAELAQLAADNHWEGIILYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A++ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADENNHGETDIPVNFGGVTFFPEDFVYADLTGIILSQEALDL 160
>gi|423611590|ref|ZP_17587451.1| RraA family protein [Bacillus cereus VD107]
gi|401247592|gb|EJR53926.1| RraA family protein [Bacillus cereus VD107]
Length = 160
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGEGSTNCALLGDNLAAIAEERNLAGIIVNGYVRDSRELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ +P+ G E++Y D DG+++S L
Sbjct: 119 IKEGKGEREIPLNFGEVEWKPNEYVYVDEDGVIVSEKSL 157
>gi|218708516|ref|YP_002416137.1| ribonuclease activity regulator protein RraA [Vibrio splendidus
LGP32]
gi|218321535|emb|CAV17487.1| Regulator of ribonuclease activity A protein 1 [Vibrio splendidus
LGP32]
Length = 161
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 95/155 (61%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE LE G+G+
Sbjct: 5 TPDLCDE-----FESKVTLLNMPLQNFGQRGAFWGKIVTVRCYHDNSKVREVLETDGSGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G++VNG +RDV + D+GV+AL + P K
Sbjct: 60 VLVVDGNGSCQKALLGDQLAILAIENGWEGVIVNGAVRDVAMMAQMDLGVQALGASPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K G+G+ +V ++I I G+++YAD +G+LIS
Sbjct: 120 EKHGVGQVNVTLSIHNQLIQPGDYIYADWNGVLIS 154
>gi|127513045|ref|YP_001094242.1| ribonuclease activity regulator protein RraA [Shewanella loihica
PV-4]
gi|126638340|gb|ABO23983.1| regulator of ribonuclease activity A [Shewanella loihica PV-4]
Length = 164
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 97/146 (66%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L L P ++ +G++++F G +VT+K FEDN +++ L + G GRVLVVDGGGS R A+L
Sbjct: 15 QLSLLAPHYRQFGQKRIFWGEVVTVKCFEDNSKVKQLLGQLGEGRVLVVDGGGSNRRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW+GIV+NG +RDV + IG++AL ++P+K +K+ +G+ +V + I
Sbjct: 75 GDMIAQSAVDNGWSGIVINGYVRDVGALAQMPIGIQALGANPIKTDKRDLGDVNVTLEID 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
I G LYAD +G+ +S +L +
Sbjct: 135 RVIIKPGMMLYADDNGVAVSSEQLDL 160
>gi|423453328|ref|ZP_17430181.1| RraA family protein [Bacillus cereus BAG5X1-1]
gi|401138380|gb|EJQ45950.1| RraA family protein [Bacillus cereus BAG5X1-1]
Length = 161
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD Q EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDEFEQ-----ELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGEASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNIPLQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|119713576|gb|ABL97627.1| possible ribonuclease activity regulator [uncultured marine
bacterium EB0_39H12]
Length = 160
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 97/162 (59%), Gaps = 6/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++ D NP E RAL PI + G ++VF G I TL+ +DN ++E +G G
Sbjct: 4 NTPDLSDENP------EARALSPILKNLGGKKVFWGKIETLQCPDDNSFVKELFNSEGEG 57
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVD G A+LG N W+GIV+NG +RD+D ++ DIGV+AL + P++
Sbjct: 58 KVLVVDAKGISSVALLGDMIAEAGVKNNWSGIVINGYVRDIDILSKLDIGVQALGTMPVR 117
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ KK G+ + I+ GG G++LYAD +G+L+S+ L++
Sbjct: 118 SEKKNQGQVGIDISFGGLTFCAGDYLYADNNGLLLSKQRLNL 159
>gi|333917721|ref|YP_004491302.1| ribonuclease activity A regulator [Amycolicicoccus subflavus
DQS3-9A1]
gi|333479942|gb|AEF38502.1| Regulator of ribonuclease activity A [Amycolicicoccus subflavus
DQS3-9A1]
Length = 160
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 5/160 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
TA++ D + E+++ F +G R+ F+G I T+K F+DN L++ L E G
Sbjct: 6 FTATADLADE-----IGPEIKSCDTQFTQFGGRREFAGRITTVKCFQDNALLKSILGEPG 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
NG VLV+DG GS+ A++G ++NGW+G+++NG +RD + D GV+AL ++P
Sbjct: 61 NGGVLVIDGEGSVHTALVGDVIAELGRSNGWSGLIINGAVRDAAVLGTLDFGVKALGTNP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRA 162
K+ K G GE+ VPI IGG + G+ L++D DG+++ A
Sbjct: 121 RKSTKTGAGERDVPIEIGGITFAPGDILHSDDDGVVVVPA 160
>gi|403725459|ref|ZP_10946569.1| ribonuclease regulator RraA [Gordonia rhizosphera NBRC 16068]
gi|403205022|dbj|GAB90900.1| ribonuclease regulator RraA [Gordonia rhizosphera NBRC 16068]
Length = 188
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + TA++ D L+ R+ F YG + F+G + T+K F+DN L++ L E
Sbjct: 4 LTFIPTADLVDEIGDLV-----RSCDTQFTQYGGHREFAGRVTTVKCFQDNALLKSILGE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG S+ A++G + NGW GI+VNG IRD I G +IGV+AL +
Sbjct: 59 SNPGGVLVVDGAESVHTALVGDLIAELGRANGWVGIIVNGAIRDSAVIGGMEIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P K+ K G+GE+ +P+TIGG G+ +Y+D DGI+I + +V
Sbjct: 119 NPRKSTKTGVGERDIPLTIGGETFHPGDIVYSDDDGIVIVTPDSAV 164
>gi|308051248|ref|YP_003914814.1| ribonuclease activity A regulator [Ferrimonas balearica DSM 9799]
gi|307633438|gb|ADN77740.1| regulator of ribonuclease activity A [Ferrimonas balearica DSM
9799]
Length = 161
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD + ++ ++P+F +G R F G + T+K FED I E LE+ G G
Sbjct: 4 NTSELCD-----LFGDQVDVVEPMFSNFGGRPSFGGELRTVKCFEDCSAILEALEQDGTG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL+VDGGGSLR A++ + A NN W G+VV G +RDVD + D+G+ ALAS P+
Sbjct: 59 KVLLVDGGGSLRRALIDADIASLAVNNRWEGLVVYGSVRDVDALEELDLGIMALASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A + G G +P+ GG + LYAD+ GI++S+ L +
Sbjct: 119 AGENGEGSLDLPVNFGGVTFLPEDHLYADSTGIILSQDPLDI 160
>gi|416052886|ref|ZP_11578521.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347991678|gb|EGY33141.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 166
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGLSSFHGKVTTVKCFENNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +N W GI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNQWEGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADGSNHGETDIPVNFGGVTFFPEDFVYADLTGIILSQEALDL 160
>gi|118620039|ref|YP_908371.1| ribonuclease activity regulator protein RraA [Mycobacterium
ulcerans Agy99]
gi|118572149|gb|ABL06900.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase, MenG
[Mycobacterium ulcerans Agy99]
Length = 165
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 90/142 (63%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G F+GPI T++ F+DN L++ L + G G VLV+DG GSL A++
Sbjct: 19 DVRSCDLQFRQFGGHAEFAGPISTVRCFQDNALLKSVLSQPGEGGVLVIDGAGSLHTALV 78
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++NGW G+VV+G +RD + G DIG++AL ++P K+ K G GE+ IT+G
Sbjct: 79 GDVIAELARSNGWTGLVVHGAVRDSAALRGIDIGIKALGTNPRKSTKTGSGERDAEITLG 138
Query: 141 GTRISDGEWLYADTDGILISRA 162
G GE Y+D DGI++ A
Sbjct: 139 GVTFVPGEIAYSDDDGIVVVAA 160
>gi|374293774|ref|YP_005040797.1| ribonuclease E inhibitor [Azospirillum lipoferum 4B]
gi|357427177|emb|CBS90118.1| ribonuclease E inhibitor [Azospirillum lipoferum 4B]
Length = 168
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 86/137 (62%)
Query: 23 RALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGG 82
R + P F+ +G FSG +VT+K EDN ++E L G GRVLVVDG GSLRCA++G
Sbjct: 22 RYVLPGFRDFGAVTRFSGEVVTVKCLEDNSRVKELLATPGTGRVLVVDGAGSLRCALMGD 81
Query: 83 NPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGT 142
A NGWAG+V+ GC+RDV E+ +G++ALAS P + ++ G V + + G
Sbjct: 82 MIAASAVKNGWAGVVIWGCVRDVAELATLPLGIKALASIPRASTRRDQGLVDVAVELPGA 141
Query: 143 RISDGEWLYADTDGILI 159
I G+ L+AD DGI++
Sbjct: 142 LIQPGDILFADEDGIVV 158
>gi|374608767|ref|ZP_09681565.1| regulator of ribonuclease activity A [Mycobacterium tusciae JS617]
gi|373553353|gb|EHP79948.1| regulator of ribonuclease activity A [Mycobacterium tusciae JS617]
Length = 158
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 90/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
E+R+ F+ +G R F+GPI T+K FEDN L++ L E G+G VLV+DGGGS+ A++
Sbjct: 18 EVRSCDLQFRQFGGRSEFAGPITTVKCFEDNALLKAVLSEPGSGGVLVIDGGGSIHSALI 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G +NG AG+++NG +RD + DIGV+AL ++P K++K G G++ V + G
Sbjct: 78 GDIIAGLGVDNGGAGLIINGAVRDAATLRTLDIGVKALGTNPRKSSKSGDGQRDVTVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + GE Y+D DGI++
Sbjct: 138 GVEFAPGEIAYSDDDGIVV 156
>gi|407070016|ref|ZP_11100854.1| ribonuclease activity regulator protein RraA [Vibrio cyclitrophicus
ZF14]
Length = 161
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE LE G G+
Sbjct: 5 TPDLCDE-----FESKVTLLNLPLQNFGQRGAFFGKIVTVRCYHDNSKVREVLETDGIGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G++VNG +RDV ++ D+GV+AL + P K
Sbjct: 60 VLVVDGNGSCQKALLGDQLAILAIENGWEGVIVNGAVRDVGMMSQMDLGVQALGASPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G+G+ +V +++ I G+++YAD +G+LIS L
Sbjct: 120 EKRGVGQVNVTLSVHNQLIQPGDYIYADWNGVLISSELL 158
>gi|424032032|ref|ZP_17771453.1| rraA family protein [Vibrio cholerae HENC-01]
gi|424039765|ref|ZP_17778063.1| rraA family protein [Vibrio cholerae HENC-02]
gi|408876444|gb|EKM15561.1| rraA family protein [Vibrio cholerae HENC-01]
gi|408892620|gb|EKM30066.1| rraA family protein [Vibrio cholerae HENC-02]
Length = 160
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQFEDQVI-----LLSLPLQNFGQRTAFHGEIVTVRCYHDNSKVREVLNEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G IRDV +++ DIGV+AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAIRDVAQMSQMDIGVQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G+GE +V +T+ + ++YAD +G+LIS+ L
Sbjct: 120 EKRGVGEVNVTLTMQNQIVQPKHYVYADWNGVLISKEALD 159
>gi|71066040|ref|YP_264767.1| ribonuclease activity regulator protein RraA [Psychrobacter
arcticus 273-4]
gi|71039025|gb|AAZ19333.1| probable dimethylmenaquinone methyltransferase [Psychrobacter
arcticus 273-4]
Length = 177
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 102/165 (61%), Gaps = 8/165 (4%)
Query: 6 TAEVCDANPQLIVSGELRALQ-PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL-----E 59
T ++ DANP+ V L ++ F +G + F G +VT+K FEDN ++ L +
Sbjct: 14 TCDLLDANPESQVC--LPNIEGKSFYSFGGKDKFCGEVVTVKCFEDNSRVKSLLNSDGKD 71
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
+ GNG+VLVVDGGGS+RCA+LG A +N WAG+++ GC+RDVD++ ++GV AL
Sbjct: 72 KDGNGKVLVVDGGGSMRCALLGDMIAQSAIDNHWAGVIIYGCVRDVDDMAQMELGVMALG 131
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P K+N++ G+ + I+ G ++ G ++YAD +GI+ S L
Sbjct: 132 CIPRKSNRRDEGQTDLEISFGDLTLNSGMFVYADNNGIIASDKPL 176
>gi|229012518|ref|ZP_04169692.1| Regulator of ribonuclease activity A [Bacillus mycoides DSM 2048]
gi|423661838|ref|ZP_17637007.1| RraA family protein [Bacillus cereus VDM022]
gi|228748678|gb|EEL98529.1| Regulator of ribonuclease activity A [Bacillus mycoides DSM 2048]
gi|401300211|gb|EJS05806.1| RraA family protein [Bacillus cereus VDM022]
Length = 161
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVD G S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDSGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNIPVQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|86147386|ref|ZP_01065699.1| ribonuclease activity regulator protein RraA [Vibrio sp. MED222]
gi|85834814|gb|EAQ52959.1| ribonuclease activity regulator protein RraA [Vibrio sp. MED222]
Length = 161
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE LE G G+
Sbjct: 5 TPDLCDE-----FESKVTLLNMPLQYFGQRGAFWGKIVTVRCYHDNSKVREVLETDGCGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A NGW G++VNG +RDV + D+G++AL + P K
Sbjct: 60 VLVVDGNGSCQKALLGDQLAILAIENGWEGVIVNGAVRDVAMMAQMDLGIQALGASPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K G+G+ +V ++I I G+++YAD +G+LIS
Sbjct: 120 EKHGVGQVNVTLSIHNQLIQPGDYIYADWNGVLIS 154
>gi|32034231|ref|ZP_00134442.1| COG0684: Demethylmenaquinone methyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209361|ref|YP_001054586.1| ribonuclease activity regulator protein RraA [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165977345|ref|YP_001652938.1| ribonuclease activity regulator protein RraA [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303249671|ref|ZP_07335876.1| ribonuclease activity regulator protein RraA [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307246836|ref|ZP_07528902.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307251173|ref|ZP_07533095.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307253592|ref|ZP_07535460.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307255820|ref|ZP_07537622.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260272|ref|ZP_07541980.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307262401|ref|ZP_07544047.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166230376|sp|A3N3J5.1|RRAA_ACTP2 RecName: Full=Regulator of ribonuclease activity A
gi|226703211|sp|B0BTI0.1|RRAA_ACTPJ RecName: Full=Regulator of ribonuclease activity A
gi|126098153|gb|ABN74981.1| Regulator of ribonuclease activity A [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165877446|gb|ABY70494.1| regulator of ribonuclease activity A [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302651483|gb|EFL81634.1| ribonuclease activity regulator protein RraA [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306852307|gb|EFM84546.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856839|gb|EFM88973.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858972|gb|EFM91017.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306861283|gb|EFM93275.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865719|gb|EFM97599.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306867949|gb|EFM99779.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 165
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE N LI LEE+G
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGASSFYGKITTVKCFESNGLIASVLEEEGQ 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALIDAELAQLALDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ IGE P+ GG +++YAD GI++S
Sbjct: 118 GADDNEIGEVDTPVNFGGVTFFPEDYVYADLTGIILS 154
>gi|229018539|ref|ZP_04175398.1| Regulator of ribonuclease activity A [Bacillus cereus AH1273]
gi|229024795|ref|ZP_04181231.1| Regulator of ribonuclease activity A [Bacillus cereus AH1272]
gi|423390454|ref|ZP_17367680.1| RraA family protein [Bacillus cereus BAG1X1-3]
gi|228736506|gb|EEL87065.1| Regulator of ribonuclease activity A [Bacillus cereus AH1272]
gi|228742751|gb|EEL92892.1| Regulator of ribonuclease activity A [Bacillus cereus AH1273]
gi|401639020|gb|EJS56761.1| RraA family protein [Bacillus cereus BAG1X1-3]
Length = 161
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + FQ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFQSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGIVALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNIPVQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|359434101|ref|ZP_09224393.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20652]
gi|357919251|dbj|GAA60642.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20652]
Length = 165
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIRE L + G G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIRELLSQDGTG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VL++DGGGS R A++ A N W GIVV G +R VDE+ D+G++A+AS P+
Sbjct: 59 LVLLIDGGGSTRRALIDIELAELALENNWNGIVVYGAVRHVDELEELDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ +G GE + + G D +++YAD+ GI++S
Sbjct: 119 ADSEGAGEDAIGVNFAGVSFFDDDFIYADSTGIVLS 154
>gi|423599374|ref|ZP_17575374.1| RraA family protein [Bacillus cereus VD078]
gi|401235278|gb|EJR41749.1| RraA family protein [Bacillus cereus VD078]
Length = 162
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVD G S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDSGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNIPVQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|308178870|ref|YP_003918276.1| ribonuclease activity regulator protein RraA [Arthrobacter
arilaitensis Re117]
gi|307746333|emb|CBT77305.1| putative ribonuclease activity regulator protein RraA [Arthrobacter
arilaitensis Re117]
Length = 158
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
++TA++ D + L+++ FQ +G R F GP T+K EDN L++E L GN
Sbjct: 6 ISTADLYDQHGD-----ALQSISAQFQDFGGRLSFYGPARTVKCHEDNGLVKEILSFPGN 60
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDGG SLR A++G A+ NGWAG+V+NG +RD + ++G++AL S+P
Sbjct: 61 GAVLVVDGGASLRYALMGDMIAASAEANGWAGVVINGAVRDRAALADMELGIKALGSNPR 120
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K K+ G I+IG +I G +YAD DGIL+
Sbjct: 121 KTVKRSHGSVDEVISIGDVKIRPGAMVYADIDGILV 156
>gi|404260153|ref|ZP_10963451.1| regulator of ribonuclease activity A [Gordonia namibiensis NBRC
108229]
gi|403401339|dbj|GAC01861.1| regulator of ribonuclease activity A [Gordonia namibiensis NBRC
108229]
Length = 185
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T+K F+DN L++ L E
Sbjct: 27 LTFTPTADLVDE-----IGADVRSCDTQFNQYGGNREFVGRVTTVKCFQDNALLKSILSE 81
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+VNG IRD I G IGV+AL +
Sbjct: 82 SNPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIVNGAIRDAKAIGGMTIGVKALGT 141
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+P K+ K G G++ VP+TIGG + G+ +Y+D DGI++ E
Sbjct: 142 NPRKSTKTGAGDRDVPLTIGGETFNPGDIVYSDDDGIVLVSPE 184
>gi|416056506|ref|ZP_11579851.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348001996|gb|EGY42718.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 166
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ ++PIF +G F G + T+K FE+N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVEPIFSSFGGLSSFHGKVTTVKCFENNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG +R A++ A +N W GI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGVVRRALIDAELAQLAADNQWEGIIVYGAVRQIQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADNSNHGETDIPVNFGGVTFFPEDFVYADLTGIILSQEALDL 160
>gi|59712726|ref|YP_205502.1| ribonuclease activity regulator protein RraA [Vibrio fischeri
ES114]
gi|197335696|ref|YP_002156919.1| ribonuclease activity regulator protein RraA [Vibrio fischeri MJ11]
gi|423686862|ref|ZP_17661670.1| ribonuclease activity regulator protein RraA [Vibrio fischeri SR5]
gi|59480827|gb|AAW86614.1| ribonuclease E (RNase E) inhibitor protein [Vibrio fischeri ES114]
gi|112005081|gb|ABH85383.1| ribonuclease activity regulator protein [Aliivibrio fischeri]
gi|197317186|gb|ACH66633.1| regulator of ribonuclease activity A [Vibrio fischeri MJ11]
gi|371494930|gb|EHN70528.1| ribonuclease activity regulator protein RraA [Vibrio fischeri SR5]
Length = 158
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
F+ +G + F G IVT++ ++DN L+RE L++ G G+VL +DG GS + A+LG A
Sbjct: 22 FKNFGGKACFYGEIVTVRCYKDNSLVREVLQQNGKGKVLFIDGNGSRQKALLGDQVATLA 81
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
N W G++V G +RDV I +G++AL + P K K+G GE+ V +TI G IS G+
Sbjct: 82 VENQWEGVIVYGVVRDVGAIQTMPLGLKALGTSPFKTEKRGAGEQQVSLTINGKMISPGD 141
Query: 149 WLYADTDGILISRAEL 164
++YAD +G+L+S+ L
Sbjct: 142 YIYADLNGLLMSKELL 157
>gi|303253811|ref|ZP_07339945.1| ribonuclease activity regulator protein RraA [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248976|ref|ZP_07530985.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307258008|ref|ZP_07539761.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|302647334|gb|EFL77556.1| ribonuclease activity regulator protein RraA [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306854522|gb|EFM86716.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306863555|gb|EFM95485.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 165
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE N LI LEE+G
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGVSSFYGKITTVKCFESNGLIASVLEEEGQ 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALIDAELAQLALDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ IGE P+ GG +++YAD GI++S
Sbjct: 118 GADDNEIGEVDTPVNFGGVTFFPEDYVYADLTGIILS 154
>gi|377570275|ref|ZP_09799420.1| regulator of ribonuclease activity A [Gordonia terrae NBRC 100016]
gi|377532549|dbj|GAB44585.1| regulator of ribonuclease activity A [Gordonia terrae NBRC 100016]
Length = 185
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F +G + F G + T++ F+DN L++ L E
Sbjct: 26 LTFTPTADLVDE-----IGADVRSCDTQFTQFGGTREFVGRVSTVRCFQDNALLKSVLGE 80
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG S+ A++G ++NGW GI+VNG IRD I G +IGV+AL +
Sbjct: 81 SNPGGVLVVDGDASVHTALVGDLIAELGRSNGWVGIIVNGAIRDAKTIGGMEIGVKALGT 140
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+P K+ K G GE+ VP+TIGG + G+ +Y+D DGI++ AE
Sbjct: 141 NPRKSTKTGAGERDVPLTIGGETFTPGDVVYSDDDGIVLVAAE 183
>gi|117920816|ref|YP_870008.1| ribonuclease activity regulator protein RraA [Shewanella sp. ANA-3]
gi|117613148|gb|ABK48602.1| regulator of ribonuclease activity A [Shewanella sp. ANA-3]
Length = 164
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
Query: 24 ALQPI-FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGG 82
+L P+ F+ +G +++F G +VT+K FEDN ++E L + G+G+VLVVDGGGS R A+LG
Sbjct: 17 SLLPLDFRSFGGKRLFWGEVVTVKCFEDNSKVKEVLAQPGHGKVLVVDGGGSPRRALLGD 76
Query: 83 NPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGT 142
A +NGW G+V+NG +RDV ++ ++GV AL + P+K K G VPI G
Sbjct: 77 LIAQSALDNGWQGVVINGYVRDVARLSTFNLGVYALGAMPIKTEKLNQGHIDVPIEFGAV 136
Query: 143 RISDGEWLYADTDGILISRAELS 165
+ G LYAD +GI +S A L+
Sbjct: 137 TVKPGMMLYADENGIAVSEASLN 159
>gi|359298634|ref|ZP_09184473.1| ribonuclease activity regulator protein RraA [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402304472|ref|ZP_10823541.1| regulator of ribonuclease activity A [Haemophilus sputorum HK 2154]
gi|400377741|gb|EJP30611.1| regulator of ribonuclease activity A [Haemophilus sputorum HK 2154]
Length = 165
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T+ +CD I ++ ++PIF +G F G I T+K FE N LI + LEE+G
Sbjct: 3 VDTSALCD-----IYLDQVDVVEPIFSSFGGASSFFGKITTVKCFESNGLIAQVLEEEGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLALDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A + IGE P+ GG +++YAD GI++S
Sbjct: 118 GAEETEIGEVDTPVNFGGVTFFPEDYIYADLTGIILS 154
>gi|302557719|ref|ZP_07310061.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302475337|gb|EFL38430.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 163
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 88/139 (63%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
ELR F+ +G + F+GPI T+ EDN L+R+ L G+G VLVVDGGGSLR A++
Sbjct: 18 ELRVCDLQFRQFGGHRGFAGPIRTVSCHEDNGLLRDLLRTPGDGAVLVVDGGGSLRTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G AQ+NGWAG+V++G +RD + G +GV+AL + P K+ K+ G VP+T G
Sbjct: 78 GDLIAGAAQDNGWAGLVLHGAVRDSAALAGLRLGVKALGTIPRKSAKEAAGAVGVPVTFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G G+ L+AD DGI +
Sbjct: 138 GVTFRPGDILHADDDGIAL 156
>gi|149190334|ref|ZP_01868607.1| ribonuclease activity regulator protein RraA [Vibrio shilonii AK1]
gi|148835823|gb|EDL52787.1| ribonuclease activity regulator protein RraA [Vibrio shilonii AK1]
Length = 160
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + ++ L Q +G+R F G IVT++ + DN ++RE L + G G+
Sbjct: 5 TPDICDQHEDKVM-----LLNLPLQNFGQRAAFWGEIVTVRCYHDNSMVREVLGQNGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL VDG GS A+LG + A NGW G++VNG +RDV + D+GV+ALA+ P K
Sbjct: 60 VLFVDGNGSCAKALLGDQLAIMAIENGWEGVIVNGAVRDVAAMAEMDLGVKALAACPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G G+ +V +T+ + G ++Y+D +G+LI++ L
Sbjct: 120 EKRGAGQINVTLTMNNQIVQPGHYVYSDWNGVLIAKEALE 159
>gi|119946902|ref|YP_944582.1| ribonuclease activity regulator protein RraA [Psychromonas
ingrahamii 37]
gi|166230399|sp|A1SZR8.1|RRAA_PSYIN RecName: Full=Regulator of ribonuclease activity A
gi|119865506|gb|ABM04983.1| S-adenosylmethionine 2-demethylmenaquinone methyltransferase
[Psychromonas ingrahamii 37]
Length = 170
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I + + ++P+ +G R F+G +VT+K FE LI + LEE G G+
Sbjct: 5 TSLLCD-----IYADTVDVVEPLLTNFGGRNSFAGEVVTIKCFESVGLIYKALEENGLGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A++ + A NGW GIVVNGC+R+VD + DIG++A+ + P+ A
Sbjct: 60 VLLVDGGGSLRRALVNAHIAELAVENGWEGIVVNGCVREVDLLEDLDIGIQAITAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
IGE + P+ G + LYAD+ GI+IS L+
Sbjct: 120 EDTQIGEVNSPVNFAGVTFLPEDILYADSTGIIISPEPLN 159
>gi|229173992|ref|ZP_04301529.1| Regulator of ribonuclease activity A [Bacillus cereus MM3]
gi|228609501|gb|EEK66786.1| Regulator of ribonuclease activity A [Bacillus cereus MM3]
Length = 159
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ DIG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNIDIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ + + G E++YAD DG++IS L
Sbjct: 119 VKEGKGERDISLQFGQVEWKPNEYVYADEDGVIISEKSL 157
>gi|42782380|ref|NP_979627.1| ribonuclease activity regulator protein RraA [Bacillus cereus ATCC
10987]
gi|402556536|ref|YP_006597807.1| ribonuclease activity regulator protein RraA [Bacillus cereus
FRI-35]
gi|61215978|sp|Q734S7.1|RRAAH_BACC1 RecName: Full=Putative regulator of ribonuclease activity
gi|42738305|gb|AAS42235.1| protein of unknown function [Bacillus cereus ATCC 10987]
gi|401797746|gb|AFQ11605.1| ribonuclease activity regulator protein RraA [Bacillus cereus
FRI-35]
Length = 159
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNVNIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + GG +++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLQFGGVEWKPNDYVYADEDGVIISEKSL 157
>gi|300780207|ref|ZP_07090063.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium genitalium ATCC 33030]
gi|300534317|gb|EFK55376.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium genitalium ATCC 33030]
Length = 167
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + TA++ D I + ++R+ F+ +G R F G I T+ F+DN L+++ L
Sbjct: 6 IQFIATADIAD-----IHNKDVRSCDIQFRNFGGRIEFCGEIHTISCFQDNGLVKKTLNS 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDG S+ A++G NNGWAG+++NG IRD E+ + G +AL +
Sbjct: 61 PGEGKVLVVDGHASMHTALMGDMIAEAGVNNGWAGVIINGPIRDSAEVAKMEFGCKALGT 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
+P K+NK GIGE+++ + +GG G+++YAD+DG+++S
Sbjct: 121 NPRKSNKDGIGEENIVLRLGGIDFIPGQYVYADSDGVVVSE 161
>gi|375264474|ref|YP_005021917.1| ribonuclease activity regulator protein RraA [Vibrio sp. EJY3]
gi|369839798|gb|AEX20942.1| ribonuclease activity regulator protein RraA [Vibrio sp. EJY3]
Length = 160
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD L+ L Q +G+R F G IVT++ + DN +RE L + G G+
Sbjct: 5 TPDICDQFEDLVT-----LLNLPLQNFGQRTAFFGEIVTVRCYHDNSKVREVLGQDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G +RDV +++ DIG++AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAVRDVAQMSQMDIGIQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G+GE +V +T+ + ++YAD +G+LIS+ +L
Sbjct: 120 EKRGLGEVNVTVTMQNQLVQPKHYVYADWNGVLISKEKLD 159
>gi|190151257|ref|YP_001969782.1| Regulator of ribonuclease activity A [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264608|ref|ZP_07546190.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226703210|sp|B3H2X0.1|RRAA_ACTP7 RecName: Full=Regulator of ribonuclease activity A
gi|189916388|gb|ACE62640.1| Regulator of ribonuclease activity A [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870071|gb|EFN01833.1| Regulator of ribonuclease activity A protein 2 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 165
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G F G I T+K FE N LI LEE+G
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGVSSFYGKITTVKCFESNGLIASVLEEEGQ 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL++DGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLIDGGGAVRRALIDTELAQLALDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ IGE P+ GG +++YAD GI++S
Sbjct: 118 GADDNEIGEVDTPVNFGGVTFFPEDYVYADLTGIILS 154
>gi|163803365|ref|ZP_02197241.1| ribonuclease activity regulator protein RraA [Vibrio sp. AND4]
gi|159172827|gb|EDP57669.1| ribonuclease activity regulator protein RraA [Vibrio sp. AND4]
Length = 314
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 159 TPDICDQ-----YEDQVTQLCLPLQNFGQRTAFHGEIVTVRCYHDNSKVREVLREDGTGK 213
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G +RDV +++ DIG++AL + P K
Sbjct: 214 VLIVDGHGSCQRALLGDQLAILGIENGWEGIIVYGAVRDVVQMSQMDIGIQALGACPFKT 273
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G+GE +V +T+ + ++YAD +G+LIS+ L V
Sbjct: 274 EKRGMGEVNVTLTMQNQIVQPKHYVYADWNGVLISKEALRV 314
>gi|85711520|ref|ZP_01042578.1| ribonuclease activity regulator protein RraA [Idiomarina baltica
OS145]
gi|85694672|gb|EAQ32612.1| ribonuclease activity regulator protein RraA [Idiomarina baltica
OS145]
Length = 161
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T+E+CD P ++ ++P+F+ YG R F G +V +K ED LI E L + G G
Sbjct: 4 NTSELCDLYPDMV-----DVVEPMFESYGGRSSFGGQLVIVKCHEDKGLIEETLNQDGGG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL++DGGGS+R A++ QA +N W GI+ G +RDVD + D+G+ +AS P+
Sbjct: 59 KVLLIDGGGSVRRALIDLAIAEQALDNDWEGIICYGSVRDVDSLEELDMGILGVASIPVG 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ +GIGE +P+ GG + +Y D+ G+++S L +
Sbjct: 119 ASSEGIGEIDIPVNFGGVTFLPEDHIYVDSTGVILSPEPLDI 160
>gi|363585976|gb|AEW28984.1| ribonuclease activity regulator protein RraA [Photobacterium
damselae subsp. piscicida]
Length = 165
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
Query: 8 EVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVL 67
++CDA I+ L +Q YG + VFSG IVTL+ FEDN L+R+ L G G+VL
Sbjct: 8 DLCDAYEDKIL-----WLPVTWQDYGGKSVFSGQIVTLRCFEDNSLVRDILSRPGKGKVL 62
Query: 68 VVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANK 127
V+DG GS+ A+LG + A N W GIVV G +RDV ++G ++GV+AL P+K K
Sbjct: 63 VIDGHGSVNRALLGDQLALLAVQNEWQGIVVYGAVRDVVTLSGLNLGVKALGVCPLKTLK 122
Query: 128 KGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ GE++V ++ RI G+ LYAD +GI+++ L
Sbjct: 123 RQSGEENVMLSFADCRIFPGDHLYADQNGIIVTPHPL 159
>gi|296119932|ref|ZP_06838486.1| putative regulator of ribonuclease activity A [Corynebacterium
ammoniagenes DSM 20306]
gi|295967086|gb|EFG80357.1| putative regulator of ribonuclease activity A [Corynebacterium
ammoniagenes DSM 20306]
Length = 158
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 91/141 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L +L F+ G + FSGP T++V EDN L++E +++ GNGRVLVVDGG + CA++
Sbjct: 15 KLDSLPLSFENLGGVEYFSGPAETVRVDEDNQLLKELMKQPGNGRVLVVDGGEKITCALM 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
GGN ++GWAG+V G IRD EI ++GV A+ S+P ++ K+ GE V +
Sbjct: 75 GGNMAAFFADSGWAGVVTVGAIRDRAEITEVELGVLAMGSNPKRSKKERTGEVGVKLEFA 134
Query: 141 GTRISDGEWLYADTDGILISR 161
G ++ G ++AD+DG+LI +
Sbjct: 135 GVKVVPGAMVFADSDGVLIEK 155
>gi|323491170|ref|ZP_08096356.1| ribonuclease activity regulator protein RraA [Vibrio brasiliensis
LMG 20546]
gi|323314538|gb|EGA67616.1| ribonuclease activity regulator protein RraA [Vibrio brasiliensis
LMG 20546]
Length = 161
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + + EL P+ +GR+ F G IVT++ + DN +RE L + G G+
Sbjct: 5 TPDICDKHEDKVTLLEL----PLHS-FGRKCAFFGEIVTVRCYHDNSKVREMLSQDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A +N W G++VNG +RDV + D+G++AL + P K
Sbjct: 60 VLVVDGHGSCQKALLGDQLAILAIDNNWEGVIVNGAVRDVAMMAEMDLGIKALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K+ +GE +V +T+ I G+++YAD +G+L+S
Sbjct: 120 EKRDVGEVNVTLTVHNQMIQPGDYIYADWNGVLMS 154
>gi|28897266|ref|NP_796871.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus RIMD 2210633]
gi|153840431|ref|ZP_01993098.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ3810]
gi|260363609|ref|ZP_05776422.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
K5030]
gi|260876232|ref|ZP_05888587.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AN-5034]
gi|260896284|ref|ZP_05904780.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
Peru-466]
gi|260902187|ref|ZP_05910582.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ4037]
gi|417321351|ref|ZP_12107891.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus 10329]
gi|33301268|sp|Q87SD2.1|RRAAH_VIBPA RecName: Full=Putative regulator of ribonuclease activity
gi|28805475|dbj|BAC58755.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio parahaemolyticus RIMD 2210633]
gi|149745904|gb|EDM57034.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ3810]
gi|308085333|gb|EFO35028.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
Peru-466]
gi|308092899|gb|EFO42594.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AN-5034]
gi|308108487|gb|EFO46027.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
AQ4037]
gi|308112536|gb|EFO50076.1| regulator of ribonuclease activity A [Vibrio parahaemolyticus
K5030]
gi|328472031|gb|EGF42908.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus 10329]
Length = 160
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE LE+ G G+
Sbjct: 5 TPDICDQ-----FEDQVTLLNLPLQNFGQRTAFHGEIVTVRCYHDNSKVREVLEQDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G +RDV +++ DIGV+AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAVRDVAQMSQMDIGVQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G+GE +V +T+ + +YAD +G+LIS+ L
Sbjct: 120 EKRGVGEVNVTLTMLNQIVQPKHHVYADWNGVLISKEALD 159
>gi|407986199|ref|ZP_11166751.1| putative regulator of ribonuclease activity [Mycobacterium
hassiacum DSM 44199]
gi|407372211|gb|EKF21275.1| putative regulator of ribonuclease activity [Mycobacterium
hassiacum DSM 44199]
Length = 159
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 89/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ + +G R+ F+GPI T+K F+DN L++ L E GNG VLV+DGGGSL A++
Sbjct: 18 DVRSCDLQLRQFGARREFAGPITTVKCFQDNALLKSVLSEPGNGGVLVIDGGGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G NGW+G+++NG +RD + DIG++AL ++P K+ K G++ VP+ G
Sbjct: 78 GDVIAGLGVRNGWSGLIINGAVRDSATLRTLDIGIKALGTNPRKSTKTVAGQRDVPVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ Y+D DGI++
Sbjct: 138 GVVFAPGDIAYSDDDGIVV 156
>gi|34810988|pdb|1NXJ|A Chain A, Structure Of Rv3853 From Mycobacterium Tuberculosis
gi|34810989|pdb|1NXJ|B Chain B, Structure Of Rv3853 From Mycobacterium Tuberculosis
gi|34810990|pdb|1NXJ|C Chain C, Structure Of Rv3853 From Mycobacterium Tuberculosis
Length = 183
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 89/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G R F+GPI T++ F+DN L++ L + G VLV+DG GSL A++
Sbjct: 44 DVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHTALV 103
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++ GW G++V+G +RD + G DIG++AL ++P K+ K G GE+ V IT+G
Sbjct: 104 GDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEITLG 163
Query: 141 GTRISDGEWLYADTDGILI 159
G G+ Y+D DGI++
Sbjct: 164 GVTFVPGDIAYSDDDGIIV 182
>gi|52425894|ref|YP_089031.1| ribonuclease activity regulator protein RraA [Mannheimia
succiniciproducens MBEL55E]
gi|52307946|gb|AAU38446.1| MenG protein [Mannheimia succiniciproducens MBEL55E]
Length = 186
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 96/158 (60%), Gaps = 5/158 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD + ++ ++PIF +G F G + T+K FE+N LI E LEE+G
Sbjct: 23 IDTSELCD-----VYLDQVDVVEPIFSSFGGVNEFFGKVTTIKCFENNGLIAEILEEQGE 77
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R + + +IG+ ALA P+
Sbjct: 78 GRVLLVDGGGAVRRALIDAELAQLAADNGWEGIIVYGAVRQLSRLENINIGIHALAPIPV 137
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
A++ GE +P+ GG +++YAD GI++S+
Sbjct: 138 GADEDTQGESDIPVNFGGVTFFPEDYVYADLTGIILSQ 175
>gi|423469578|ref|ZP_17446322.1| RraA family protein [Bacillus cereus BAG6O-2]
gi|402438410|gb|EJV70422.1| RraA family protein [Bacillus cereus BAG6O-2]
Length = 162
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD Q EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDEFEQ-----ELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSMELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNISLQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|170726961|ref|YP_001760987.1| ribonuclease activity regulator protein RraA [Shewanella woodyi
ATCC 51908]
gi|169812308|gb|ACA86892.1| regulator of ribonuclease activity A [Shewanella woodyi ATCC 51908]
Length = 164
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 90/146 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL L F+ YG R++F G I T+K FEDN +++ L G G+VL VDGG SL A+L
Sbjct: 15 ELSLLSINFKQYGERKIFWGEIATVKCFEDNSKVKQILSTDGKGKVLFVDGGASLNRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G + A NGW GI++NGC+RDV ++ DIG++AL ++P+K K +GE + + +
Sbjct: 75 GDMIAMNAVENGWEGIIINGCVRDVGVLSQLDIGIKALGANPIKTEKLDVGEINPELNVS 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
I G +Y+D +G+ IS +L +
Sbjct: 135 NIIIVPGMMVYSDDNGVAISDEKLDL 160
>gi|339323997|ref|YP_004682890.1| regulator of ribonuclease activity A [Cupriavidus necator N-1]
gi|338171990|gb|AEI83042.1| regulator of ribonuclease activity A [Cupriavidus necator N-1]
Length = 170
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 97/161 (60%), Gaps = 6/161 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + +T+++ D +P +L+ F+ +G R+ F+GP TL+V ED+ + L
Sbjct: 2 LIMFSTSDLSDEHPDTTSVCQLQ-----FRSFGLREHFAGPCATLRVQEDHRPVLRRLST 56
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVD GGSLR + G A NGWAG+V++G IRD +NG DIGV+AL +
Sbjct: 57 PGAGRVLVVDVGGSLRIGVFGDRLAGLAAANGWAGLVIHGVIRDSKTVNGIDIGVKALGT 116
Query: 121 HPMK-ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
++ A+++ E +VP+T GG GEW+Y D D +LIS
Sbjct: 117 TALRNASEQPGAEDNVPLTFGGVIFRPGEWVYCDADAVLIS 157
>gi|126437998|ref|YP_001073689.1| ribonuclease activity regulator protein RraA [Mycobacterium sp.
JLS]
gi|166230391|sp|A3Q7S1.1|RRAAH_MYCSJ RecName: Full=Putative regulator of ribonuclease activity
gi|126237798|gb|ABO01199.1| regulator of ribonuclease activity A [Mycobacterium sp. JLS]
Length = 159
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 89/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ + +G R F+G + T++ F+DN L++ L E G+G VLV+DG GSL A++
Sbjct: 18 DVRSCDLQLRQFGGRPEFAGRVTTVRCFQDNALLKSVLSEPGDGGVLVIDGDGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G ++NGW+G+++NG +RD + DIG++AL ++P K+ K G GE+ VP+ G
Sbjct: 78 GDVIAALGRDNGWSGLIINGAVRDASTLRTLDIGIKALGTNPRKSTKTGAGERDVPVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ Y+D DGI+I
Sbjct: 138 GVTFTPGDVAYSDDDGIVI 156
>gi|269960271|ref|ZP_06174646.1| ribonuclease activity regulator protein RraA [Vibrio harveyi 1DA3]
gi|269835078|gb|EEZ89162.1| ribonuclease activity regulator protein RraA [Vibrio harveyi 1DA3]
Length = 160
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDQVTLLNLPLQNFGQRTAFHGEIVTVRCYHDNSKVREVLSEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G IRDV +++ DIGV+AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAIRDVAQMSQMDIGVQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ +GE +V +T+ + ++YAD +G+LIS+ L
Sbjct: 120 EKRDVGEVNVTLTMQNQIVQPKHYVYADWNGVLISKEALD 159
>gi|15610989|ref|NP_218370.1| Regulator of RNase E activity a RraA [Mycobacterium tuberculosis
H37Rv]
gi|15843484|ref|NP_338521.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis CDC1551]
gi|31795027|ref|NP_857520.1| ribonuclease activity regulator protein RraA [Mycobacterium bovis
AF2122/97]
gi|121639771|ref|YP_979995.1| ribonuclease activity regulator protein RraA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148663721|ref|YP_001285244.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis H37Ra]
gi|148825062|ref|YP_001289816.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis F11]
gi|167969977|ref|ZP_02552254.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis H37Ra]
gi|224992266|ref|YP_002646956.1| ribonuclease activity regulator protein RraA [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800904|ref|YP_003033906.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis KZN 1435]
gi|254233342|ref|ZP_04926668.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis C]
gi|254366398|ref|ZP_04982442.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis str. Haarlem]
gi|254548859|ref|ZP_05139306.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289441294|ref|ZP_06431038.1| 2-deethylenaquinone ethyltransferase enG [Mycobacterium
tuberculosis T46]
gi|289445455|ref|ZP_06435199.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis CPHL_A]
gi|289572111|ref|ZP_06452338.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis T17]
gi|289572508|ref|ZP_06452735.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis K85]
gi|289747696|ref|ZP_06507074.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis 02_1987]
gi|289748386|ref|ZP_06507764.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis T92]
gi|289755987|ref|ZP_06515365.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis EAS054]
gi|289760022|ref|ZP_06519400.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis T85]
gi|289764042|ref|ZP_06523420.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis GM 1503]
gi|294993003|ref|ZP_06798694.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis 210]
gi|297636539|ref|ZP_06954319.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis KZN 4207]
gi|297733534|ref|ZP_06962652.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis KZN R506]
gi|298527328|ref|ZP_07014737.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis 94_M4241A]
gi|306778219|ref|ZP_07416556.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu001]
gi|306778747|ref|ZP_07417084.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu002]
gi|306786775|ref|ZP_07425097.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu003]
gi|306786904|ref|ZP_07425226.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu004]
gi|306791457|ref|ZP_07429759.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu005]
gi|306795525|ref|ZP_07433827.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu006]
gi|306801499|ref|ZP_07438167.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu008]
gi|306805706|ref|ZP_07442374.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu007]
gi|306970102|ref|ZP_07482763.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu009]
gi|306974336|ref|ZP_07486997.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu010]
gi|307082042|ref|ZP_07491212.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu011]
gi|307086653|ref|ZP_07495766.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu012]
gi|313660865|ref|ZP_07817745.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis KZN V2475]
gi|339633847|ref|YP_004725489.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase MENG
[Mycobacterium africanum GM041182]
gi|340628825|ref|YP_004747277.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase MENG [Mycobacterium canettii CIPT
140010059]
gi|375298126|ref|YP_005102394.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis KZN 4207]
gi|378773634|ref|YP_005173367.1| Regulator of ribonuclease activity A [Mycobacterium bovis BCG str.
Mexico]
gi|383309568|ref|YP_005362379.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis RGTB327]
gi|385993063|ref|YP_005911362.1| menG, ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis CCDC5180]
gi|385996704|ref|YP_005915003.1| menG, ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis CCDC5079]
gi|386000645|ref|YP_005918945.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis CTRI-2]
gi|386006650|ref|YP_005924929.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis RGTB423]
gi|392388447|ref|YP_005310076.1| menG [Mycobacterium tuberculosis UT205]
gi|392434340|ref|YP_006475385.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis KZN 605]
gi|397675816|ref|YP_006517352.1| RraA family protein [Mycobacterium tuberculosis H37Rv]
gi|422815110|ref|ZP_16863328.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis CDC1551A]
gi|424806415|ref|ZP_18231846.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis W-148]
gi|424945729|ref|ZP_18361425.1| ribonuclease activity regulator protein [Mycobacterium tuberculosis
NCGM2209]
gi|433629000|ref|YP_007262629.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140060008]
gi|433632945|ref|YP_007266573.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140070010]
gi|433636954|ref|YP_007270581.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140070017]
gi|433644046|ref|YP_007289805.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140070008]
gi|449065977|ref|YP_007433060.1| ribonuclease activity regulator protein RraA [Mycobacterium bovis
BCG str. Korea 1168P]
gi|61236916|sp|P0A666.1|RRAAH_MYCTU RecName: Full=Putative regulator of ribonuclease activity
gi|61236919|sp|P0A667.1|RRAAH_MYCBO RecName: Full=Putative regulator of ribonuclease activity
gi|166230389|sp|A1KQI8.1|RRAAH_MYCBP RecName: Full=Putative regulator of ribonuclease activity
gi|166230393|sp|A5U9I2.1|RRAAH_MYCTA RecName: Full=Putative regulator of ribonuclease activity
gi|254809480|sp|C1AIV9.1|RRAAH_MYCBT RecName: Full=Putative regulator of ribonuclease activity
gi|13883856|gb|AAK48335.1| protein of unknown function [Mycobacterium tuberculosis CDC1551]
gi|31620625|emb|CAD96069.1| PUTATIVE S-ADENOSYLMETHIONINE:2-DEMETHYLMENAQUINONE
METHYLTRANSFERASE MENG [Mycobacterium bovis AF2122/97]
gi|121495419|emb|CAL73906.1| Putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase menG [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124603135|gb|EAY61410.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis C]
gi|134151910|gb|EBA43955.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis str. Haarlem]
gi|148507873|gb|ABQ75682.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis H37Ra]
gi|148723589|gb|ABR08214.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis F11]
gi|224775382|dbj|BAH28188.1| ribonuclease activity regulatory protein [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253322408|gb|ACT27011.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis KZN 1435]
gi|289414213|gb|EFD11453.1| 2-deethylenaquinone ethyltransferase enG [Mycobacterium
tuberculosis T46]
gi|289418413|gb|EFD15614.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis CPHL_A]
gi|289536939|gb|EFD41517.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis K85]
gi|289545866|gb|EFD49513.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis T17]
gi|289688224|gb|EFD55712.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis 02_1987]
gi|289688973|gb|EFD56402.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis T92]
gi|289696574|gb|EFD64003.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis EAS054]
gi|289711548|gb|EFD75564.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis GM 1503]
gi|289715586|gb|EFD79598.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis T85]
gi|298497122|gb|EFI32416.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis 94_M4241A]
gi|308213375|gb|EFO72774.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu001]
gi|308328229|gb|EFP17080.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu002]
gi|308328627|gb|EFP17478.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu003]
gi|308336371|gb|EFP25222.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu004]
gi|308339969|gb|EFP28820.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu005]
gi|308343968|gb|EFP32819.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu006]
gi|308347752|gb|EFP36603.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu007]
gi|308351689|gb|EFP40540.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu008]
gi|308352377|gb|EFP41228.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu009]
gi|308356326|gb|EFP45177.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu010]
gi|308360282|gb|EFP49133.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu011]
gi|308363917|gb|EFP52768.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis SUMu012]
gi|323717437|gb|EGB26641.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis CDC1551A]
gi|326905691|gb|EGE52624.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis W-148]
gi|328460632|gb|AEB06055.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis KZN 4207]
gi|339296659|gb|AEJ48770.1| menG, ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis CCDC5079]
gi|339300257|gb|AEJ52367.1| menG, ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis CCDC5180]
gi|339333203|emb|CCC28937.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase MENG [Mycobacterium africanum
GM041182]
gi|340007015|emb|CCC46206.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase MENG [Mycobacterium canettii CIPT
140010059]
gi|341603792|emb|CCC66473.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase menG [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344221693|gb|AEN02324.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis CTRI-2]
gi|356595955|gb|AET21184.1| Regulator of ribonuclease activity A [Mycobacterium bovis BCG str.
Mexico]
gi|358230244|dbj|GAA43736.1| ribonuclease activity regulator protein [Mycobacterium tuberculosis
NCGM2209]
gi|378546998|emb|CCE39277.1| menG [Mycobacterium tuberculosis UT205]
gi|379030257|dbj|BAL67990.1| ribonuclease activity regulator protein [Mycobacterium tuberculosis
str. Erdman = ATCC 35801]
gi|380723521|gb|AFE18630.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis RGTB327]
gi|380727138|gb|AFE14933.1| ribonuclease activity regulator protein RraA [Mycobacterium
tuberculosis RGTB423]
gi|392055750|gb|AFM51308.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase menG
[Mycobacterium tuberculosis KZN 605]
gi|395140722|gb|AFN51881.1| RraA family protein [Mycobacterium tuberculosis H37Rv]
gi|432156606|emb|CCK53870.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140060008]
gi|432160594|emb|CCK57923.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140070008]
gi|432164538|emb|CCK62001.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140070010]
gi|432168547|emb|CCK66091.1| Regulator of RNase E activity A RraA [Mycobacterium canettii CIPT
140070017]
gi|440583367|emb|CCG13770.1| putativeS-ADENOSYLMETHIONINE:2-DEMETHYLMENAQUINONE
METHYLTRANSFERASE MENG [Mycobacterium tuberculosis
7199-99]
gi|444897416|emb|CCP46682.1| Regulator of RNase E activity a RraA [Mycobacterium tuberculosis
H37Rv]
gi|449034485|gb|AGE69912.1| ribonuclease activity regulator protein RraA [Mycobacterium bovis
BCG str. Korea 1168P]
Length = 157
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 89/139 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G R F+GPI T++ F+DN L++ L + G VLV+DG GSL A++
Sbjct: 18 DVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A++ GW G++V+G +RD + G DIG++AL ++P K+ K G GE+ V IT+G
Sbjct: 78 GDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEITLG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G G+ Y+D DGI++
Sbjct: 138 GVTFVPGDIAYSDDDGIIV 156
>gi|260906930|ref|ZP_05915252.1| ribonuclease activity regulator protein RraA [Brevibacterium linens
BL2]
Length = 155
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 98/158 (62%), Gaps = 5/158 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V+TA++ D EL +L F +G + FSGP T++ ++DN L + L + G+
Sbjct: 3 VSTADLWDERGP-----ELHSLALNFGDFGAKDSFSGPARTVRCYQDNALAKSTLSQPGD 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VL++DGGGS+ A++G A +NGWAG+V+NG +RD ++ +G++ALAS+P
Sbjct: 58 GAVLIIDGGGSIATALMGDMIAELAVSNGWAGVVINGAVRDRVALSSMGLGIKALASNPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
K++K G GE V + IGG I G ++AD DG+++ +
Sbjct: 118 KSSKTGDGELDVTLEIGGATIRPGAMVFADPDGVVVEK 155
>gi|296137864|ref|YP_003645107.1| ribonuclease activity A regulator [Tsukamurella paurometabola DSM
20162]
gi|296025998|gb|ADG76768.1| regulator of ribonuclease activity A [Tsukamurella paurometabola
DSM 20162]
Length = 163
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 90/144 (62%), Gaps = 5/144 (3%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGG-----SL 75
E+R+ F+ +G R+ F+G +VT+K F+DN L++ L E G GRVLV+DG SL
Sbjct: 19 EVRSCDTQFRQFGGRRAFAGEVVTVKCFQDNALLKSVLGEPGAGRVLVIDGSDENGVPSL 78
Query: 76 RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHV 135
A++G + NGWAGIV G IRD I DIGV+AL ++P K+ K G GE+ V
Sbjct: 79 HTALVGDIIAELGRGNGWAGIVAYGAIRDAAVIGTLDIGVKALGTNPRKSTKTGAGERDV 138
Query: 136 PITIGGTRISDGEWLYADTDGILI 159
P++ GG + G+ L++D DGI++
Sbjct: 139 PLSFGGVTFAPGDTLFSDDDGIVL 162
>gi|323499439|ref|ZP_08104411.1| ribonuclease activity regulator protein RraA [Vibrio sinaloensis
DSM 21326]
gi|323315495|gb|EGA68534.1| ribonuclease activity regulator protein RraA [Vibrio sinaloensis
DSM 21326]
Length = 161
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + + EL P+ +G + F G +VT++ + DN +RE L + G G+
Sbjct: 5 TPDICDKHESKVTLVEL----PLHN-FGAKSAFYGEMVTVRCYHDNSKVREMLSQDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A +N W G++VNG IRD I DIGV+AL + P K
Sbjct: 60 VLVVDGHGSCQRALLGDQLAILAIDNNWEGVIVNGAIRDAGAIAEMDIGVKALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G+ +V +TI + G+++YAD +G+L+S +L
Sbjct: 120 EKRGAGDVNVTLTIHNQMLQPGDYVYADWNGVLMSSEKL 158
>gi|229030992|ref|ZP_04187008.1| Regulator of ribonuclease activity A [Bacillus cereus AH1271]
gi|228730339|gb|EEL81303.1| Regulator of ribonuclease activity A [Bacillus cereus AH1271]
Length = 159
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GEK++ + G E++YAD DG++IS L
Sbjct: 119 VKEGKGEKNISLQFGQVEWKPDEYVYADEDGVIISEKSL 157
>gi|61215868|sp|Q65RG4.2|RRAA_MANSM RecName: Full=Regulator of ribonuclease activity A
Length = 166
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 96/158 (60%), Gaps = 5/158 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD + ++ ++PIF +G F G + T+K FE+N LI E LEE+G
Sbjct: 3 IDTSELCD-----VYLDQVDVVEPIFSSFGGVNEFFGKVTTIKCFENNGLIAEILEEQGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R + + +IG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNGWEGIIVYGAVRQLSRLENINIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
A++ GE +P+ GG +++YAD GI++S+
Sbjct: 118 GADEDTQGESDIPVNFGGVTFFPEDYVYADLTGIILSQ 155
>gi|340355219|ref|ZP_08677911.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Sporosarcina newyorkensis 2681]
gi|339622659|gb|EGQ27174.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Sporosarcina newyorkensis 2681]
Length = 159
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V TA++CD EL+ F YG+ + FSGPI T+KVFEDNVL++E L+
Sbjct: 3 VKTADLCDD-----FIDELQVCSAEFNSYGKHKRFSGPISTVKVFEDNVLVKEALQTIPE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G VLVVDGGGS RCA++G AQ AG+++ GC RD + +IGV A+ S P+
Sbjct: 58 GNVLVVDGGGSKRCALMGDMLGEIAQKRKLAGVIIYGCARDTAALGTLEIGVMAIGSMPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ K+G G+ + G G ++YAD DG++++ +L+
Sbjct: 118 KSIKRGEGQSGEVLHFGNVEWIPGHYVYADEDGVVVAPRKLA 159
>gi|336311675|ref|ZP_08566636.1| ribonuclease E inhibitor RraA [Shewanella sp. HN-41]
gi|335864789|gb|EGM69858.1| ribonuclease E inhibitor RraA [Shewanella sp. HN-41]
Length = 164
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 91/145 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L L F +G +++F G IVT+K FEDN ++E L + G G+VLVVDGGGS R A+L
Sbjct: 15 KLTLLPLAFTAFGGKRLFWGEIVTVKCFEDNSKVKEVLAQDGQGKVLVVDGGGSARRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A ++GW G+V+NG IRD + ++GV AL + P+K +K G+ +VPI IG
Sbjct: 75 GDLIAQSALDHGWQGVVINGYIRDAARLATFNLGVYALGAMPIKTDKLNQGQVNVPIEIG 134
Query: 141 GTRISDGEWLYADTDGILISRAELS 165
G + G +YAD +GI IS L+
Sbjct: 135 GVIVKPGMMIYADENGIAISEESLN 159
>gi|229162198|ref|ZP_04290167.1| Regulator of ribonuclease activity A [Bacillus cereus R309803]
gi|228621248|gb|EEK78105.1| Regulator of ribonuclease activity A [Bacillus cereus R309803]
Length = 171
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 16 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 70
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 71 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 130
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++YAD DG++IS L
Sbjct: 131 VKEGKGERNISVQFGQVEWKPNEYVYADEDGVIISEKSL 169
>gi|89072516|ref|ZP_01159088.1| ribonuclease activity regulator protein RraA [Photobacterium sp.
SKA34]
gi|89051620|gb|EAR57073.1| ribonuclease activity regulator protein RraA [Photobacterium sp.
SKA34]
Length = 165
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 87/135 (64%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG R +F G VTL+ FEDN L+R+ L + G G+VL +DG GS R A+LG + A N
Sbjct: 26 YGGRNIFYGQCVTLRCFEDNSLVRDILSQDGTGKVLFIDGHGSCRRALLGDQLALLAIKN 85
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
W GI+VNG +RD+ ++ D+GV+AL P+K K+ +GE +V + I + G+++Y
Sbjct: 86 NWQGIIVNGAVRDIATLSTLDLGVKALGGCPIKTVKRQMGELNVTLNISEKLVYPGDYIY 145
Query: 152 ADTDGILISRAELSV 166
AD +GI++S+ L +
Sbjct: 146 ADLNGIILSKQALDL 160
>gi|229060910|ref|ZP_04198265.1| Regulator of ribonuclease activity A [Bacillus cereus AH603]
gi|228718557|gb|EEL70189.1| Regulator of ribonuclease activity A [Bacillus cereus AH603]
Length = 161
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKKQFYGKIATVKVKDDNVLVKEGLQTLTEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGIVALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DGI++S L
Sbjct: 119 IKEGKGERNIPVQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|118469646|ref|YP_890652.1| ribonuclease activity regulator protein RraA [Mycobacterium
smegmatis str. MC2 155]
gi|399990641|ref|YP_006570992.1| Regulator of ribonuclease activity A [Mycobacterium smegmatis str.
MC2 155]
gi|166230390|sp|A0R664.1|RRAAH_MYCS2 RecName: Full=Putative regulator of ribonuclease activity
gi|118170933|gb|ABK71829.1| regulator of ribonuclease activity A [Mycobacterium smegmatis str.
MC2 155]
gi|399235204|gb|AFP42697.1| Regulator of ribonuclease activity A [Mycobacterium smegmatis str.
MC2 155]
Length = 159
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 87/139 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ Q YG + +F+GP+ T++ F+DN L++ L G G VLVVDG GSL A++
Sbjct: 18 DVRSCDLQLQNYGGKIMFAGPVTTVRCFQDNALLKSILSTPGEGAVLVVDGAGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW+G++VNG +RD + D+G++AL ++P K K G GE+ V ++ G
Sbjct: 78 GDVIAGLAADNGWSGVIVNGAVRDAAALRTIDVGIKALGTNPRKGTKTGEGERDVEVSFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ Y D DGI++
Sbjct: 138 GVTFTPGDIAYCDEDGIVV 156
>gi|153835442|ref|ZP_01988109.1| regulator of ribonuclease activity A [Vibrio harveyi HY01]
gi|444424578|ref|ZP_21220033.1| ribonuclease activity regulator protein RraA [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|148868005|gb|EDL67196.1| regulator of ribonuclease activity A [Vibrio harveyi HY01]
gi|444242070|gb|ELU53586.1| ribonuclease activity regulator protein RraA [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 160
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDQVTLLSLPLQNFGQRSAFHGEIVTVRCYHDNSKVREVLSEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G +RDV +++ DIG++AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAVRDVAQMSQMDIGIQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G+GE +V +T+ + ++YAD +G+L S+ L
Sbjct: 120 EKRGMGEVNVTLTMQNQIVQPKHYVYADWNGVLTSKEAL 158
>gi|441514896|ref|ZP_20996709.1| regulator of ribonuclease activity A [Gordonia amicalis NBRC
100051]
gi|441450379|dbj|GAC54670.1| regulator of ribonuclease activity A [Gordonia amicalis NBRC
100051]
Length = 162
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T+K F+DN L++ L E
Sbjct: 4 LTFTPTADLVDE-----IGADVRSCDTQFTQYGGNREFVGRVTTVKCFQDNALLKSILSE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+ NG IRD I G IGV+AL +
Sbjct: 59 SNPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIANGAIRDAKTIGGMAIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ VP+TIGG + G+ +Y+D DGI++
Sbjct: 119 NPRKSTKTGAGERDVPLTIGGETFNPGDIVYSDDDGIVL 157
>gi|423364996|ref|ZP_17342429.1| RraA family protein [Bacillus cereus VD142]
gi|401092435|gb|EJQ00564.1| RraA family protein [Bacillus cereus VD142]
Length = 161
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKKQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGIVALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G GE+++P+ G E++Y D DGI++S L+
Sbjct: 119 VKEGKGERNIPVQFGEVEWKPNEYVYVDEDGIIVSDKNLN 158
>gi|56461555|ref|YP_156836.1| ribonuclease activity regulator protein RraA [Idiomarina loihiensis
L2TR]
gi|61215798|sp|Q5QV38.1|RRAA_IDILO RecName: Full=Regulator of ribonuclease activity A
gi|56180565|gb|AAV83287.1| Demethylmenaquinone methyltransferase [Idiomarina loihiensis L2TR]
Length = 161
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD P ++ ++P+F+ YG R F G +V +K ED LI E + G G+
Sbjct: 5 TSELCDLYPDMV-----DVVEPMFESYGGRSSFGGSLVIIKCHEDKGLIEETIAADGGGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGS R A++ QA +N W GIV G +R+VD + DIG+ +AS P+ A
Sbjct: 60 ILLIDGGGSSRRALVDAAIAEQAMDNDWEGIVCYGAVREVDALEELDIGILGVASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE +VP+ GG + LY DT G+++S L +
Sbjct: 120 ISEGVGELNVPVNFGGVTFLPEDHLYIDTTGVILSPEPLDI 160
>gi|229168065|ref|ZP_04295793.1| Regulator of ribonuclease activity A [Bacillus cereus AH621]
gi|423592758|ref|ZP_17568789.1| RraA family protein [Bacillus cereus VD048]
gi|228615309|gb|EEK72406.1| Regulator of ribonuclease activity A [Bacillus cereus AH621]
gi|401229423|gb|EJR35938.1| RraA family protein [Bacillus cereus VD048]
Length = 161
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKKQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGIVALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNIPVQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|343518067|ref|ZP_08755063.1| regulator of ribonuclease activity A [Haemophilus pittmaniae HK 85]
gi|343394918|gb|EGV07465.1| regulator of ribonuclease activity A [Haemophilus pittmaniae HK 85]
Length = 166
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD + ++ ++PIF +G F G I T+K FE+ LI E LEE G
Sbjct: 3 IDTSELCD-----FYADQVDVVEPIFSSFGGVSSFFGKITTVKCFENVGLIAEILEEDGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGG++R A++ A +N W GI+V G +R + ++ DIG+ ALA P+
Sbjct: 58 GRVLVVDGGGAVRRALIDAELAQLAADNRWEGIIVYGAVRQLQQLENIDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ +GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GGDENNLGESDLPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
>gi|423511251|ref|ZP_17487782.1| RraA family protein [Bacillus cereus HuA2-1]
gi|402452513|gb|EJV84327.1| RraA family protein [Bacillus cereus HuA2-1]
Length = 162
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKKQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGIVALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++P+ G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNIPVQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|423517972|ref|ZP_17494453.1| RraA family protein [Bacillus cereus HuA2-4]
gi|401161945|gb|EJQ69305.1| RraA family protein [Bacillus cereus HuA2-4]
Length = 159
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDEFKK-----ELQICRQSFRSFGKKKQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ DIG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNIDIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ + + G E++YAD DG++IS L
Sbjct: 119 IKEGKGERGISLQFGQVEWKPNEYVYADEDGVIISEKSL 157
>gi|423401932|ref|ZP_17379105.1| RraA family protein [Bacillus cereus BAG2X1-2]
gi|423477373|ref|ZP_17454088.1| RraA family protein [Bacillus cereus BAG6X1-1]
gi|401652534|gb|EJS70090.1| RraA family protein [Bacillus cereus BAG2X1-2]
gi|402430376|gb|EJV62453.1| RraA family protein [Bacillus cereus BAG6X1-1]
Length = 159
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYADEDGVIISEKSL 157
>gi|90408304|ref|ZP_01216469.1| ribonuclease activity regulator protein RraA [Psychromonas sp.
CNPT3]
gi|90310605|gb|EAS38725.1| ribonuclease activity regulator protein RraA [Psychromonas sp.
CNPT3]
Length = 171
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I + + ++P+ +G R F+G +VT+K FE LI + LEE G G+
Sbjct: 5 TSLLCD-----IYADTIDVVEPLLTNFGGRNSFAGEVVTVKCFESVGLIYKALEENGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ + A NGW GIVVNGC+R+V ++ DIG++A+ + P+ A
Sbjct: 60 VLLVDGGGSIRRALVNVHIAELAIENGWEGIVVNGCVREVAQLEEMDIGIQAITAIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +G+ +VPI G + LYAD+ GI+IS L V
Sbjct: 120 DDTEVGDINVPINFAGVTFLPEDILYADSTGIVISPEPLDV 160
>gi|163940971|ref|YP_001645855.1| ribonuclease activity regulator protein RraA [Bacillus
weihenstephanensis KBAB4]
gi|423668911|ref|ZP_17643940.1| RraA family protein [Bacillus cereus VDM034]
gi|423674962|ref|ZP_17649901.1| RraA family protein [Bacillus cereus VDM062]
gi|163863168|gb|ABY44227.1| regulator of ribonuclease activity A [Bacillus weihenstephanensis
KBAB4]
gi|401300359|gb|EJS05952.1| RraA family protein [Bacillus cereus VDM034]
gi|401308897|gb|EJS14271.1| RraA family protein [Bacillus cereus VDM062]
Length = 159
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDEFEK-----ELQICRQSFRSFGKKKQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ DIG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNIDIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ + + G E++YAD DG++IS L
Sbjct: 119 IKEGKGERGISLQFGQVEWKPNEYVYADEDGVIISEKSL 157
>gi|156973255|ref|YP_001444162.1| ribonuclease activity regulator protein RraA [Vibrio harveyi ATCC
BAA-1116]
gi|156524849|gb|ABU69935.1| hypothetical protein VIBHAR_00936 [Vibrio harveyi ATCC BAA-1116]
Length = 160
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDQVTLLSLPLQNFGQRSAFHGEIVTVRCYHDNSKVREVLSEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G +RDV +++ DIG++AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAVRDVAQMSQMDIGIQALGACPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G+GE +V +T+ + ++YAD +G+L S+ L
Sbjct: 120 EKRGMGEVNVTLTMQNQIVQPKHYVYADWNGVLTSKEAL 158
>gi|229151503|ref|ZP_04279706.1| Regulator of ribonuclease activity A [Bacillus cereus m1550]
gi|228632046|gb|EEK88672.1| Regulator of ribonuclease activity A [Bacillus cereus m1550]
Length = 159
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVEWNPNEYVYADEDGVIISEKSL 157
>gi|77361649|ref|YP_341224.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
haloplanktis TAC125]
gi|123588926|sp|Q3IJD2.1|RRAA_PSEHT RecName: Full=Regulator of ribonuclease activity A
gi|76876560|emb|CAI87782.1| regulator of RNase E/rne (Belongs to the rraA family)
[Pseudoalteromonas haloplanktis TAC125]
Length = 165
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIRE L + G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIRELLSQDGTD 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VL++DGGGS R A++ A N W GI+V G +R VDEI D+G++A+AS P+
Sbjct: 59 LVLLIDGGGSTRRALIDIELAELALENNWQGIIVYGAVRHVDEIEELDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ +G GE + + G D +++YAD+ GI++S
Sbjct: 119 ADSQGAGEDGIGVNFAGVSFFDDDFIYADSTGIVLS 154
>gi|326384374|ref|ZP_08206055.1| ribonuclease activity regulator protein RraA [Gordonia
neofelifaecis NRRL B-59395]
gi|326196972|gb|EGD54165.1| ribonuclease activity regulator protein RraA [Gordonia
neofelifaecis NRRL B-59395]
Length = 162
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 4 LNFTPTADLVDE-----IGADVRSCDTQFTQYGGNREFVGTVTTVRCFQDNALLKSILSE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+ NG IRD I G DIGV+AL +
Sbjct: 59 PNPGGVLVIDGAASVHTALVGDIIAELGRSNGWVGIIANGAIRDAKTIGGMDIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G+G++ VPI +GG + G+ Y+D DGI++
Sbjct: 119 NPRKSTKSGVGDRDVPIELGGITFNPGDIAYSDDDGIVV 157
>gi|404422139|ref|ZP_11003837.1| ribonuclease activity regulator protein RraA [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403658062|gb|EJZ12814.1| ribonuclease activity regulator protein RraA [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 161
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 87/139 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ Q YG R +F+GPI T++ F+DN L++ L G+G VLVVDG GSL A++
Sbjct: 18 DVRSCDLQLQNYGGRTMFAGPITTVRCFQDNALLKSILSTPGDGGVLVVDGNGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +GW+G++V+G +RD + D+G++AL ++P K K G GE+ V ++ G
Sbjct: 78 GDIIAGLAAEHGWSGVIVHGAVRDAAALRTIDVGIKALGTNPRKGTKTGEGERDVEVSFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G GE YAD DGI++
Sbjct: 138 GVTFVPGEIAYADEDGIVV 156
>gi|229156915|ref|ZP_04284996.1| Regulator of ribonuclease activity A [Bacillus cereus ATCC 4342]
gi|228626405|gb|EEK83151.1| Regulator of ribonuclease activity A [Bacillus cereus ATCC 4342]
Length = 159
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+R+ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKREQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYVDEDGVIISEKSL 157
>gi|424047898|ref|ZP_17785454.1| rraA family protein [Vibrio cholerae HENC-03]
gi|408883208|gb|EKM21995.1| rraA family protein [Vibrio cholerae HENC-03]
Length = 160
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDQVTLLNLPLQNFGQRTAFHGEIVTVRCYHDNSKVREVLSENGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G IRDV +++ DIGV+AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAIRDVAQMSQMDIGVQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
++ +GE +V +T+ + ++YAD +G+LIS+ L
Sbjct: 120 ERRDVGEVNVTLTMQNQIVQPKHYVYADWNGVLISKEALD 159
>gi|218898394|ref|YP_002446805.1| ribonuclease activity regulator protein RraA [Bacillus cereus
G9842]
gi|228940368|ref|ZP_04102939.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973285|ref|ZP_04133874.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228979848|ref|ZP_04140169.1| Regulator of ribonuclease activity A [Bacillus thuringiensis Bt407]
gi|384187296|ref|YP_005573192.1| hypothetical protein CT43_CH3232 [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410675615|ref|YP_006927986.1| putative regulator of ribonuclease activity [Bacillus thuringiensis
Bt407]
gi|452199668|ref|YP_007479749.1| Ribonuclease E inhibitor RraA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|218544617|gb|ACK97011.1| protein of unknown function [Bacillus cereus G9842]
gi|228779863|gb|EEM28109.1| Regulator of ribonuclease activity A [Bacillus thuringiensis Bt407]
gi|228786481|gb|EEM34471.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819494|gb|EEM65548.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326941005|gb|AEA16901.1| hypothetical protein CT43_CH3232 [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409174744|gb|AFV19049.1| putative regulator of ribonuclease activity [Bacillus thuringiensis
Bt407]
gi|452105061|gb|AGG02001.1| Ribonuclease E inhibitor RraA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 159
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVEWNPNEYVYADEDGVIISEKSL 157
>gi|333992806|ref|YP_004525420.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase MenG
[Mycobacterium sp. JDM601]
gi|333488774|gb|AEF38166.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase MenG
[Mycobacterium sp. JDM601]
Length = 157
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 90/142 (63%)
Query: 18 VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRC 77
+ ++R+ F+ G R F+G I T++ FEDN L++ L E G+G VLV+DG GSL
Sbjct: 15 IGADVRSCDLQFRQLGGRTEFAGRISTVRCFEDNALVKSVLSEPGDGGVLVIDGAGSLHT 74
Query: 78 AILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPI 137
A++G A++NGWAG++V+G +RD + DIGV+AL ++P K+ K G GE+ V +
Sbjct: 75 ALVGDLIAELARSNGWAGLIVHGAVRDAAMLRTLDIGVKALGTNPRKSTKTGAGERDVVV 134
Query: 138 TIGGTRISDGEWLYADTDGILI 159
+GG GE Y+D DGI++
Sbjct: 135 ELGGIAFVPGEIAYSDDDGIVV 156
>gi|423559079|ref|ZP_17535381.1| RraA family protein [Bacillus cereus MC67]
gi|401190183|gb|EJQ97232.1| RraA family protein [Bacillus cereus MC67]
Length = 161
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD Q EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDEFEQ-----ELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGEASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNISLQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|388600466|ref|ZP_10158862.1| ribonuclease activity regulator protein RraA [Vibrio campbellii
DS40M4]
Length = 160
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDHVTLLSLPLQNFGQRSAFHGEIVTVRCYHDNSKVREVLSEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G +RDV +++ DIG++AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVYGAVRDVAQMSQMDIGIQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G+GE +V +T+ + ++YAD +G+L S+ L
Sbjct: 120 EKRGMGEVNVTLTMQNQIVQPKHYVYADWNGVLTSKEAL 158
>gi|172040754|ref|YP_001800469.1| ribonuclease activity regulator protein RraA [Corynebacterium
urealyticum DSM 7109]
gi|448823729|ref|YP_007416894.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium urealyticum DSM 7111]
gi|171852058|emb|CAQ05034.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium urealyticum DSM 7109]
gi|448277226|gb|AGE36650.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium urealyticum DSM 7111]
Length = 186
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + TA++ D I+ E R+ FQ G + F G I T+ F+DN L++ L E
Sbjct: 25 ITFIPTADLVD-----IIGAESRSCDTQFQDLGGKVEFCGRITTVSCFQDNALLKSILSE 79
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG SL A++G Q NGWAG++VN IRD I D G +AL +
Sbjct: 80 PNPGGVLVIDGQESLHTALVGDIIAGLGQKNGWAGVIVNAAIRDSKAIGDMDFGCKALGT 139
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+P K+ K G GEK V + GG + GE++YAD+DGI+++ + +
Sbjct: 140 NPRKSTKTGAGEKDVVLRFGGVEFNPGEYVYADSDGIIVTESPV 183
>gi|404212751|ref|YP_006666926.1| Demethylmenaquinone methyltransferase [Gordonia sp. KTR9]
gi|403643550|gb|AFR46790.1| Demethylmenaquinone methyltransferase [Gordonia sp. KTR9]
Length = 185
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 26 LTFTPTADLVDE-----IGADVRSCDTQFTQYGGNREFVGRVSTVRCFQDNALLKSVLGE 80
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG S+ A++G ++NGW GI+VNG IRD I G +IGV+AL +
Sbjct: 81 SNPGGVLVVDGDASVHTALVGDLIAELGRSNGWVGIIVNGAIRDAKTIGGMEIGVKALGT 140
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+P K+ K G GE+ +P++IGG + G+ +Y+D DGI++ E
Sbjct: 141 NPRKSTKTGAGERDIPLSIGGETFAPGDIVYSDDDGIVLVAPE 183
>gi|332533774|ref|ZP_08409632.1| ribonuclease E inhibitor RraA [Pseudoalteromonas haloplanktis
ANT/505]
gi|392534041|ref|ZP_10281178.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
arctica A 37-1-2]
gi|332036829|gb|EGI73291.1| ribonuclease E inhibitor RraA [Pseudoalteromonas haloplanktis
ANT/505]
Length = 165
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIRE L + G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIRELLSQDGTD 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VL++DGGGS R A++ A N W GIVV G +R VDE+ D+G++A+AS P+
Sbjct: 59 LVLLIDGGGSTRRALIDIELAELALENNWNGIVVYGAVRHVDELEELDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ +G GE + + G D +++YAD+ GI++S
Sbjct: 119 ADSEGAGEDAIGVNFAGVSFFDDDFIYADSTGIVLS 154
>gi|423384811|ref|ZP_17362067.1| RraA family protein [Bacillus cereus BAG1X1-2]
gi|423528835|ref|ZP_17505280.1| RraA family protein [Bacillus cereus HuB1-1]
gi|401639481|gb|EJS57220.1| RraA family protein [Bacillus cereus BAG1X1-2]
gi|402449703|gb|EJV81538.1| RraA family protein [Bacillus cereus HuB1-1]
Length = 159
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGKVDWNPNEYVYADEDGVIISEKSL 157
>gi|225865295|ref|YP_002750673.1| hypothetical protein BCA_3405 [Bacillus cereus 03BB102]
gi|225785807|gb|ACO26024.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 159
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFYGEIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVIDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G GE+++ + G E++YAD DG++IS L +
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYADEDGVIISEKSLHL 159
>gi|227327582|ref|ZP_03831606.1| ribonuclease activity regulator protein RraA [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 145
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 85/136 (62%)
Query: 31 IYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQN 90
I+G R F G I T+K FEDN L+ + LEE G GRVL+VDGGGS+R A++ A
Sbjct: 9 IFGGRTSFGGKITTVKCFEDNGLLFDLLEENGLGRVLLVDGGGSVRRALINAEIARLATQ 68
Query: 91 NGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWL 150
N W GIVV G +R VD++ DIG++A+A+ P+ A +GIGE + + GG G+ L
Sbjct: 69 NEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPVGAGSEGIGESDIRVNFGGVTFFSGDHL 128
Query: 151 YADTDGILISRAELSV 166
YAD GI+++ L +
Sbjct: 129 YADNTGIILAEDPLDI 144
>gi|119470411|ref|ZP_01613139.1| ribonuclease activity regulator protein RraA [Alteromonadales
bacterium TW-7]
gi|359448852|ref|ZP_09238365.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20480]
gi|392539896|ref|ZP_10287033.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
marina mano4]
gi|119446336|gb|EAW27612.1| ribonuclease activity regulator protein RraA [Alteromonadales
bacterium TW-7]
gi|358045338|dbj|GAA74614.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20480]
Length = 165
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIRE L + G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIREILSQDGTE 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VL++DGGGS R A++ A N W GIVV G +R VDE+ D+G++A+AS P+
Sbjct: 59 QVLLIDGGGSTRRALIDIELAELAFENNWNGIVVYGAVRHVDELEELDVGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ +G GE + + G D +++YAD+ GI++S
Sbjct: 119 ADSEGAGENGIGVNFAGVSFFDDDFIYADSTGIVLS 154
>gi|354599582|ref|ZP_09017599.1| Regulator of ribonuclease activity A [Brenneria sp. EniD312]
gi|353677517|gb|EHD23550.1| Regulator of ribonuclease activity A [Brenneria sp. EniD312]
Length = 161
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G+GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGKITTVKCFEDNGLLYDLLEENGSGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P A
Sbjct: 60 VLLIDGGGSVRRALIDAALARLATQNEWEGIVVYGAVRQVDDLAELDIGIQAMAAIPGGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE + + GG G+ LYAD GI+++ L +
Sbjct: 120 VGEGVGESDIRVNFGGVTFFSGDHLYADNTGIILAEDPLDI 160
>gi|218233641|ref|YP_002368026.1| ribonuclease activity regulator protein RraA [Bacillus cereus
B4264]
gi|218161598|gb|ACK61590.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 159
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASRNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVEWNPNEYVYADEDGVIISEKSL 157
>gi|441509338|ref|ZP_20991256.1| regulator of ribonuclease activity A [Gordonia aichiensis NBRC
108223]
gi|441446436|dbj|GAC49217.1| regulator of ribonuclease activity A [Gordonia aichiensis NBRC
108223]
Length = 164
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 8 LTFTPTADLVDE-----IGADVRSCDLQFTQYGGVREFVGTVTTVRCFQDNALLKSILGE 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG SL A++G ++NGW GI+ NG IRD I G +IGV+AL +
Sbjct: 63 SNPGGVLVIDGDASLHTALVGDIIAELGRSNGWVGIIANGAIRDAKTIGGMEIGVKALGT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ VPIT+G S G+ +Y+D DGI++
Sbjct: 123 NPRKSTKTGAGERDVPITLGSVTFSPGDTVYSDDDGIVL 161
>gi|237809497|ref|YP_002893937.1| ribonuclease activity regulator protein RraA [Tolumonas auensis DSM
9187]
gi|259494532|sp|C4LBS7.1|RRAA_TOLAT RecName: Full=Regulator of ribonuclease activity A
gi|237501758|gb|ACQ94351.1| regulator of ribonuclease activity A [Tolumonas auensis DSM 9187]
Length = 161
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+++CD I ++ ++P+F +G R F G + T+K FE N +IR+ ++E G GR
Sbjct: 5 TSQLCD-----IYQDQVDVVEPMFSTFGGRSSFGGLVTTIKCFEANGIIRQIVKESGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGSLR A++ + A +NGW GI+ G +R+VD + +IG++ALAS P+ A
Sbjct: 60 VLLIDGGGSLRRALIDADIAAIAADNGWEGIICYGSVREVDALADLEIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
++ G+ +P+ GG + +YADT G+++S L +
Sbjct: 120 DEDDTGDSELPVNFGGVTFLPEDHIYADTTGVILSPEPLDI 160
>gi|228922039|ref|ZP_04085350.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228953600|ref|ZP_04115641.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229070769|ref|ZP_04203998.1| Regulator of ribonuclease activity A [Bacillus cereus F65185]
gi|229080535|ref|ZP_04213056.1| Regulator of ribonuclease activity A [Bacillus cereus Rock4-2]
gi|423425382|ref|ZP_17402413.1| RraA family protein [Bacillus cereus BAG3X2-2]
gi|423436780|ref|ZP_17413761.1| RraA family protein [Bacillus cereus BAG4X12-1]
gi|423504017|ref|ZP_17480609.1| RraA family protein [Bacillus cereus HD73]
gi|423581523|ref|ZP_17557634.1| RraA family protein [Bacillus cereus VD014]
gi|423635966|ref|ZP_17611619.1| RraA family protein [Bacillus cereus VD156]
gi|449090235|ref|YP_007422676.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|228702837|gb|EEL55302.1| Regulator of ribonuclease activity A [Bacillus cereus Rock4-2]
gi|228712348|gb|EEL64294.1| Regulator of ribonuclease activity A [Bacillus cereus F65185]
gi|228806025|gb|EEM52603.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228837647|gb|EEM82977.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401111873|gb|EJQ19754.1| RraA family protein [Bacillus cereus BAG3X2-2]
gi|401122516|gb|EJQ30303.1| RraA family protein [Bacillus cereus BAG4X12-1]
gi|401216288|gb|EJR23003.1| RraA family protein [Bacillus cereus VD014]
gi|401275954|gb|EJR81911.1| RraA family protein [Bacillus cereus VD156]
gi|402458130|gb|EJV89883.1| RraA family protein [Bacillus cereus HD73]
gi|449023992|gb|AGE79155.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 159
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVDWNPNEYVYADEDGVIISEKSL 157
>gi|343500439|ref|ZP_08738332.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii ATCC
19109]
gi|418481465|ref|ZP_13050507.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342820283|gb|EGU55107.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii ATCC
19109]
gi|384570917|gb|EIF01461.1| ribonuclease activity regulator protein RraA [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 161
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + + EL P+ +G++ F G IVT++ + DN +RE L + G G+
Sbjct: 5 TPDICDKHEDKVTLLEL----PLHS-FGQKFAFYGEIVTVRCYHDNSKVREMLSQDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A +N W G++VNG +RDV + ++G++AL + P K
Sbjct: 60 VLVVDGHGSCQKALLGDQLAILAIDNNWEGVIVNGAVRDVGMMAEMELGIKALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K+G GE +V +TI I G+++YAD +G+L+S
Sbjct: 120 EKRGAGEVNVTLTIHNQMIQPGDYIYADWNGVLMS 154
>gi|262200169|ref|YP_003271377.1| ribonuclease activity A regulator [Gordonia bronchialis DSM 43247]
gi|262083516|gb|ACY19484.1| regulator of ribonuclease activity A [Gordonia bronchialis DSM
43247]
Length = 166
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + S +L+ F YG + F G + T+K F+DN L++ L E
Sbjct: 8 LTFTPTADLVDEIGDTVRSCDLQ-----FTQYGGNREFVGRVTTVKCFQDNALLKSILGE 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG GS+ A++G ++NGW GI++N IRD I +IGV+AL +
Sbjct: 63 SNPGGVLVVDGAGSVHTALVGDLIAELGRSNGWVGIIINAAIRDSKPIGEMEIGVKALGT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+P K+ K G+GE+ +P+TIGG + G+ +Y+D DGI+I E
Sbjct: 123 NPRKSTKTGVGERDIPLTIGGETFNPGDIVYSDDDGIVIVTPE 165
>gi|418464897|ref|ZP_13035836.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756852|gb|EHK91009.1| ribonuclease activity regulator protein RraA [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 166
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 94/163 (57%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+E+CD I ++ + PIF +G F G + T+K FE N LI E LEE G
Sbjct: 3 IDTSELCD-----IYLDQVDVVDPIFSSFGGLSSFHGKVTTVKCFESNGLIAEILEENGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +N W GI+V G +R + ++ +IG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAADNQWEGIIVYGAVRQIQQLENIEIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ GE +P+ GG +++YAD GI++S+ L +
Sbjct: 118 GADGSNHGETDIPVNFGGVTFFPEDFVYADLTGIILSQEALDL 160
>gi|228959507|ref|ZP_04121194.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229046975|ref|ZP_04192602.1| Regulator of ribonuclease activity A [Bacillus cereus AH676]
gi|229110734|ref|ZP_04240297.1| Regulator of ribonuclease activity A [Bacillus cereus Rock1-15]
gi|229145893|ref|ZP_04274272.1| Regulator of ribonuclease activity A [Bacillus cereus BDRD-ST24]
gi|296503825|ref|YP_003665525.1| ribonuclease activity A regulator [Bacillus thuringiensis BMB171]
gi|423628403|ref|ZP_17604152.1| RraA family protein [Bacillus cereus VD154]
gi|423641681|ref|ZP_17617299.1| RraA family protein [Bacillus cereus VD166]
gi|423649175|ref|ZP_17624745.1| RraA family protein [Bacillus cereus VD169]
gi|423656183|ref|ZP_17631482.1| RraA family protein [Bacillus cereus VD200]
gi|228637501|gb|EEK93952.1| Regulator of ribonuclease activity A [Bacillus cereus BDRD-ST24]
gi|228672613|gb|EEL27894.1| Regulator of ribonuclease activity A [Bacillus cereus Rock1-15]
gi|228724359|gb|EEL75689.1| Regulator of ribonuclease activity A [Bacillus cereus AH676]
gi|228800187|gb|EEM47117.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296324877|gb|ADH07805.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
BMB171]
gi|401269689|gb|EJR75717.1| RraA family protein [Bacillus cereus VD154]
gi|401277631|gb|EJR83570.1| RraA family protein [Bacillus cereus VD166]
gi|401284673|gb|EJR90539.1| RraA family protein [Bacillus cereus VD169]
gi|401291302|gb|EJR96978.1| RraA family protein [Bacillus cereus VD200]
Length = 159
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVDWNPNEYVYADEDGVIISEKSL 157
>gi|407788675|ref|ZP_11135779.1| ribonuclease activity regulator protein RraA [Gallaecimonas
xiamenensis 3-C-1]
gi|407207919|gb|EKE77849.1| ribonuclease activity regulator protein RraA [Gallaecimonas
xiamenensis 3-C-1]
Length = 159
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 27 PIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVV 86
P+ + G +F G +VT+K FEDN ++E L G GRVLVVDGG SL A++G
Sbjct: 22 PLLDL-GGTAIFFGQVVTVKCFEDNSRVKELLATPGQGRVLVVDGGASLAKALMGDLIAQ 80
Query: 87 QAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISD 146
A +NGWAG+V+ G IRD I +GV+AL P K ++KG G V + GG I
Sbjct: 81 SAVDNGWAGVVIFGAIRDAGAIAQMPLGVKALGCTPFKTDRKGQGLAEVALKCGGVHIRP 140
Query: 147 GEWLYADTDGILISRAEL 164
G+WLYAD +G+++S A L
Sbjct: 141 GQWLYADKNGVVLSDARL 158
>gi|120599057|ref|YP_963631.1| ribonuclease activity regulator protein RraA [Shewanella sp.
W3-18-1]
gi|146292872|ref|YP_001183296.1| ribonuclease activity regulator protein RraA [Shewanella
putrefaciens CN-32]
gi|386313565|ref|YP_006009730.1| ribonuclease activity A regulator [Shewanella putrefaciens 200]
gi|120559150|gb|ABM25077.1| regulator of ribonuclease activity A [Shewanella sp. W3-18-1]
gi|145564562|gb|ABP75497.1| regulator of ribonuclease activity A [Shewanella putrefaciens
CN-32]
gi|319426190|gb|ADV54264.1| regulator of ribonuclease activity A [Shewanella putrefaciens 200]
Length = 164
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
Query: 9 VCDANPQLI--VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRV 66
+ D P L +L L F+ YG +++F G +VT+K FEDN ++E L + G+G+V
Sbjct: 1 MLDLLPDLFDHYPSKLTLLPLEFKAYGGKRLFWGEVVTVKCFEDNSKVKEILAQDGHGKV 60
Query: 67 LVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKAN 126
LVVDGGGS R A+LG A ++ W G+V+NG +RDV + ++GV AL + P+K
Sbjct: 61 LVVDGGGSSRRALLGDLIAQSALDHSWQGVVINGYVRDVARLATFNLGVSALGAMPIKTE 120
Query: 127 KKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G+ +VPI +GG + G +YAD +GI IS L+
Sbjct: 121 KLNQGQINVPIDMGGVIVKPGMMIYADENGIAISEESLN 159
>gi|410619820|ref|ZP_11330711.1| regulator of ribonuclease activity A protein 2 [Glaciecola polaris
LMG 21857]
gi|410160598|dbj|GAC34849.1| regulator of ribonuclease activity A protein 2 [Glaciecola polaris
LMG 21857]
Length = 161
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD + + + ++P+F +G R F G I T+K FED +I + LE+ G G+
Sbjct: 5 TSALCD-----LFADSVDVVEPMFVSFGGRASFGGEITTIKCFEDKGMILKTLEQPGLGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A +NGW GI+ G +R+VD++ +IGV A+AS P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSTAAQIAFDNGWEGIICYGSVREVDDLEEINIGVHAIASIPVSA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ KG+GE V + GG + +YAD GI++S L V
Sbjct: 120 DDKGVGEVDVAVNFGGVTFLPEDHVYADRTGIILSPEPLDV 160
>gi|350530247|ref|ZP_08909188.1| ribonuclease activity regulator protein RraA [Vibrio rotiferianus
DAT722]
Length = 160
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +RE L E G G+
Sbjct: 5 TPDICDQ-----FEDQVTLLSLPLQNFGQRTAFHGEIVTVRCYHDNSKVREVLGEDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG + NGW GI+V G IRDV +++ DIG++AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLAILGIENGWEGIIVFGAIRDVAQMSQMDIGIQALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G+GE +V +T+ + +YAD +G+LIS+ L
Sbjct: 120 EKRGVGEVNVTLTMQNQIVQPKHHVYADWNGVLISKEALD 159
>gi|423562300|ref|ZP_17538576.1| RraA family protein [Bacillus cereus MSX-A1]
gi|401200465|gb|EJR07350.1| RraA family protein [Bacillus cereus MSX-A1]
Length = 159
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVQEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGKVDWNPNEYVYADEDGVIISEKSL 157
>gi|383822894|ref|ZP_09978111.1| ribonuclease activity regulator protein RraA [Mycobacterium phlei
RIVM601174]
gi|383330981|gb|EID09501.1| ribonuclease activity regulator protein RraA [Mycobacterium phlei
RIVM601174]
Length = 159
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 87/139 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ +G R F+GPI T+K F+DN L++ L + GNG VLV+DG GSL A++
Sbjct: 18 DVRSCDLQFRQFGARTQFAGPITTVKCFQDNALLKSVLSQPGNGGVLVIDGDGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G NGWAGI+VNG +RD + DIG++AL ++P K+ K G G++ V + G
Sbjct: 78 GDVIAGLGVTNGWAGIIVNGAVRDAATLRTLDIGIKALGTNPRKSTKTGEGQRDVAVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G G +++D DGI++
Sbjct: 138 GVMFVPGHIVHSDEDGIVV 156
>gi|228911733|ref|ZP_04075506.1| Regulator of ribonuclease activity A [Bacillus thuringiensis IBL
200]
gi|229179568|ref|ZP_04306921.1| Regulator of ribonuclease activity A [Bacillus cereus 172560W]
gi|229191363|ref|ZP_04318349.1| Regulator of ribonuclease activity A [Bacillus cereus ATCC 10876]
gi|365160003|ref|ZP_09356177.1| RraA family protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|423412951|ref|ZP_17390071.1| RraA family protein [Bacillus cereus BAG3O-2]
gi|423431264|ref|ZP_17408268.1| RraA family protein [Bacillus cereus BAG4O-1]
gi|228592168|gb|EEK50001.1| Regulator of ribonuclease activity A [Bacillus cereus ATCC 10876]
gi|228604069|gb|EEK61537.1| Regulator of ribonuclease activity A [Bacillus cereus 172560W]
gi|228847891|gb|EEM92772.1| Regulator of ribonuclease activity A [Bacillus thuringiensis IBL
200]
gi|363624252|gb|EHL75331.1| RraA family protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|401102511|gb|EJQ10497.1| RraA family protein [Bacillus cereus BAG3O-2]
gi|401118289|gb|EJQ26121.1| RraA family protein [Bacillus cereus BAG4O-1]
Length = 159
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASRNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVDWNPNEYVYADEDGVIISEKSL 157
>gi|343926306|ref|ZP_08765815.1| ribonuclease regulator [Gordonia alkanivorans NBRC 16433]
gi|409392837|ref|ZP_11244370.1| ribonuclease regulator [Gordonia rubripertincta NBRC 101908]
gi|343763935|dbj|GAA12741.1| ribonuclease regulator [Gordonia alkanivorans NBRC 16433]
gi|403197395|dbj|GAB87604.1| ribonuclease regulator [Gordonia rubripertincta NBRC 101908]
Length = 162
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T+K F+DN L++ L E
Sbjct: 4 LTFTPTADLVDE-----IGADVRSCDTQFTQYGGNREFVGRVTTVKCFQDNALLKSILSE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+VNG IRD I G IGV+AL +
Sbjct: 59 SNPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIVNGAIRDAKTIGGMAIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G G++ VP++IGG + G+ +Y+D DGI++
Sbjct: 119 NPRKSTKTGAGDRDVPLSIGGETFNPGDIVYSDDDGIVL 157
>gi|330447434|ref|ZP_08311083.1| ribonuclease E inhibitor protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491625|dbj|GAA05580.1| ribonuclease E inhibitor protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 165
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG + +F G VTL+ FEDN L+R+ L + G G+VL++DG GS R A+LG + A N
Sbjct: 26 YGGKPIFYGQCVTLRCFEDNSLVRDILSQDGTGKVLLIDGHGSCRRALLGDQLALLAIKN 85
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
W GI+VNG +RDV + ++GV+A+ + P+K K+ +GE +V + I + G+++Y
Sbjct: 86 HWQGIIVNGAVRDVGTLATLELGVKAIGACPIKTIKRQMGELNVTLNINEDLVYPGDYIY 145
Query: 152 ADTDGILISRAELSV 166
AD +GI++S+ EL +
Sbjct: 146 ADLNGIILSKTELDL 160
>gi|354618079|ref|ZP_09035284.1| Regulator of ribonuclease activity A [Saccharomonospora
paurometabolica YIM 90007]
gi|353214073|gb|EHB79178.1| Regulator of ribonuclease activity A [Saccharomonospora
paurometabolica YIM 90007]
Length = 176
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 86/139 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
LR F+ +G R+ F G + T+ ++DN L++E L G G VLVVDG GSL A+
Sbjct: 34 RLRVCDTQFRAFGGRRAFGGRVRTVSCYQDNGLVKELLNSPGAGCVLVVDGRGSLHTALT 93
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGWAG+V+NG +RD + G ++GV+AL ++P K++K G+G VP+ G
Sbjct: 94 GDLIAAAAVDNGWAGLVINGAVRDSAVLAGLNLGVKALGTNPRKSSKAGVGAVDVPVGFG 153
Query: 141 GTRISDGEWLYADTDGILI 159
G G+ LYAD DG+++
Sbjct: 154 GVTFHPGDTLYADDDGVVL 172
>gi|423488442|ref|ZP_17465124.1| RraA family protein [Bacillus cereus BtB2-4]
gi|423494167|ref|ZP_17470811.1| RraA family protein [Bacillus cereus CER057]
gi|423499042|ref|ZP_17475659.1| RraA family protein [Bacillus cereus CER074]
gi|401152312|gb|EJQ59749.1| RraA family protein [Bacillus cereus CER057]
gi|401159124|gb|EJQ66513.1| RraA family protein [Bacillus cereus CER074]
gi|402434044|gb|EJV66089.1| RraA family protein [Bacillus cereus BtB2-4]
Length = 161
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVD G S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDSGASKNCALLGDNLAAIAEERNLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNISLQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|423396284|ref|ZP_17373485.1| RraA family protein [Bacillus cereus BAG2X1-1]
gi|423407161|ref|ZP_17384310.1| RraA family protein [Bacillus cereus BAG2X1-3]
gi|401652767|gb|EJS70322.1| RraA family protein [Bacillus cereus BAG2X1-1]
gi|401659736|gb|EJS77220.1| RraA family protein [Bacillus cereus BAG2X1-3]
Length = 159
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSGELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYADEDGVIISENSL 157
>gi|383779654|ref|YP_005464220.1| putative demethylmenaquinone methyltransferase [Actinoplanes
missouriensis 431]
gi|381372886|dbj|BAL89704.1| putative demethylmenaquinone methyltransferase [Actinoplanes
missouriensis 431]
Length = 155
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ +TA++ D + S + + Q YG VF GP VT+ F+DN L++ L E G
Sbjct: 1 MTSTADLYDEYGDTLGSCDTQLRQ-----YGGVAVFRGPAVTVSCFQDNALLKSVLSEPG 55
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
+GRVLVVDGGGSL A++G A +NGWAG+++NG +RDV + +G++AL S+P
Sbjct: 56 DGRVLVVDGGGSLHTALMGDIIGGLAVSNGWAGVIINGAVRDVAALRELPVGIKALGSNP 115
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K+ K G G++ V + GG R + G + +D DGI++
Sbjct: 116 RKSAKTGAGDRDVVLEFGGCRFTPGAEVVSDDDGIVV 152
>gi|24374110|ref|NP_718153.1| Rra-like regulator of RNAse E [Shewanella oneidensis MR-1]
gi|37088843|sp|Q8EE23.1|RRAAH_SHEON RecName: Full=Putative regulator of ribonuclease activity
gi|24348600|gb|AAN55597.1| Rra-like regulator of RNAse E [Shewanella oneidensis MR-1]
Length = 164
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 9 VCDANPQLI--VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRV 66
+ D P L +L L F+ +G +++F G +VT+K FEDN ++E L + G+G+V
Sbjct: 1 MLDLLPDLFDHYPSKLTLLPLAFRAFGGKRLFWGEVVTVKCFEDNSKVKEVLAQPGHGKV 60
Query: 67 LVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKAN 126
L+VDGGGS R A+LG A +NGW G+++NG +RD ++ ++GV AL + PMK
Sbjct: 61 LIVDGGGSSRRALLGDLIAQSAMDNGWQGVIINGYVRDAARLSSFNLGVYALGAMPMKTE 120
Query: 127 KKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G+ +VPI +G + G +Y D +GI IS L+
Sbjct: 121 KLDQGQINVPIELGCVTVKPGMMVYVDENGIAISEESLN 159
>gi|381398673|ref|ZP_09924076.1| Regulator of ribonuclease activity A [Microbacterium laevaniformans
OR221]
gi|380774164|gb|EIC07465.1| Regulator of ribonuclease activity A [Microbacterium laevaniformans
OR221]
Length = 156
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M + TA++ D + S ALQ +G R F GP+ T++ DN L++ L
Sbjct: 1 MTTIATADLYDERGDALDS---LALQ--LHDFGGRAAFDGPVRTIRCHRDNALVKATLAT 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G VLV+DGGGSL A++G A NGWAG++V+G IRD I D+GV+AL S
Sbjct: 56 PGEGAVLVIDGGGSLESALVGDLIAASAVANGWAGLIVHGAIRDRVAIAALDLGVKALGS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
+P K+ K G+G VP+ I G G ++AD DG+L+ R
Sbjct: 116 NPRKSAKAGVGALDVPVEIAGVVFRPGAHVWADADGVLVER 156
>gi|229514001|ref|ZP_04403463.1| ribonuclease E inhibitor RraA [Vibrio cholerae TMA 21]
gi|229349182|gb|EEO14139.1| ribonuclease E inhibitor RraA [Vibrio cholerae TMA 21]
Length = 162
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 6 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 60
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL S P K
Sbjct: 61 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGSSPFKT 120
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 121 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 161
>gi|377561256|ref|ZP_09790716.1| regulator of ribonuclease activity A [Gordonia otitidis NBRC
100426]
gi|377521550|dbj|GAB35881.1| regulator of ribonuclease activity A [Gordonia otitidis NBRC
100426]
Length = 164
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 8 FTFTPTADLVDE-----IGADVRSCDTQFTQYGGVREFVGTVTTVRCFQDNALLKSILGE 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+ NG IRD I G +IGV+AL +
Sbjct: 63 ANPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIANGAIRDAKTIGGMEIGVKALGT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ VP+T+GG + G+ +Y+D DGI++
Sbjct: 123 NPRKSTKTGAGERDVPVTLGGVTFTPGDTVYSDDDGIVL 161
>gi|336248003|ref|YP_004591713.1| ribonuclease activity regulator protein RraA [Enterobacter
aerogenes KCTC 2190]
gi|334734059|gb|AEG96434.1| ribonuclease activity regulator protein RraA [Enterobacter
aerogenes KCTC 2190]
Length = 161
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G G
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEQNGRGH 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGS+R A++ + A N W G+VV G +R VD++ DIG++ALA+ P+ A
Sbjct: 60 ILLIDGGGSVRRALIDADLARLAVQNEWEGLVVYGAVRQVDDLEDLDIGIQALAAIPVAA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDI 160
>gi|116672539|ref|YP_833472.1| ribonuclease activity regulator protein RraA [Arthrobacter sp.
FB24]
gi|116612648|gb|ABK05372.1| regulator of ribonuclease activity A [Arthrobacter sp. FB24]
Length = 176
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 85/141 (60%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL ++ FQ G FSGP+ T++ EDN L++ L G+G VLVVDG GSLR A++
Sbjct: 34 ELDSIALQFQSLGGLSHFSGPVRTIRCLEDNALVKSTLGTPGDGAVLVVDGAGSLRTALM 93
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG IRD + + +GV+AL S+P K+ K G G+ V + I
Sbjct: 94 GDMIAASAVANGWAGVVINGAIRDREVLADLPLGVKALGSNPRKSAKTGAGQTEVDLEID 153
Query: 141 GTRISDGEWLYADTDGILISR 161
G + G ++ D DGIL+ R
Sbjct: 154 GVTVRPGAMIWCDPDGILVER 174
>gi|75763625|ref|ZP_00743318.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Bacillus thuringiensis serovar israelensis ATCC 35646]
gi|228901812|ref|ZP_04065983.1| Regulator of ribonuclease activity A [Bacillus thuringiensis IBL
4222]
gi|228966214|ref|ZP_04127275.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402559391|ref|YP_006602115.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis HD-771]
gi|423359721|ref|ZP_17337224.1| RraA family protein [Bacillus cereus VD022]
gi|434376250|ref|YP_006610894.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis HD-789]
gi|74488887|gb|EAO52410.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Bacillus thuringiensis serovar israelensis ATCC 35646]
gi|228793482|gb|EEM41024.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228857833|gb|EEN02322.1| Regulator of ribonuclease activity A [Bacillus thuringiensis IBL
4222]
gi|401082882|gb|EJP91146.1| RraA family protein [Bacillus cereus VD022]
gi|401788043|gb|AFQ14082.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis HD-771]
gi|401874807|gb|AFQ26974.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis HD-789]
Length = 159
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQPFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASRNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVDWNPNEYVYADEDGVIISEKSL 157
>gi|441217678|ref|ZP_20977352.1| 2-demethylmenaquinone methyltransferase [Mycobacterium smegmatis
MKD8]
gi|440623959|gb|ELQ85830.1| 2-demethylmenaquinone methyltransferase [Mycobacterium smegmatis
MKD8]
Length = 159
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 86/139 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ Q YG + F+GP+ T++ F+DN L++ L G G VLVVDG GSL A++
Sbjct: 18 DVRSCDLQLQNYGGKIKFAGPVTTVRCFQDNALLKSILSTPGEGGVLVVDGAGSLHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A +NGW+G++VNG +RD + D+G++AL ++P K K G GE+ V ++ G
Sbjct: 78 GDVIAGLAADNGWSGVIVNGAVRDAAALRTIDVGIKALGTNPRKGTKTGEGERDVEVSFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ Y D DGI++
Sbjct: 138 GVTFTPGDIAYCDEDGIVV 156
>gi|423458618|ref|ZP_17435415.1| RraA family protein [Bacillus cereus BAG5X2-1]
gi|401146231|gb|EJQ53749.1| RraA family protein [Bacillus cereus BAG5X2-1]
Length = 159
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDEFEK-----ELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPAGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNMNIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKTNEYVYVDEDGVIISEKSL 157
>gi|229092276|ref|ZP_04223451.1| Regulator of ribonuclease activity A [Bacillus cereus Rock3-42]
gi|228691093|gb|EEL44859.1| Regulator of ribonuclease activity A [Bacillus cereus Rock3-42]
Length = 159
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYVDEDGVVISEKSL 157
>gi|217960724|ref|YP_002339288.1| ribonuclease activity regulator protein RraA [Bacillus cereus
AH187]
gi|229139927|ref|ZP_04268492.1| Regulator of ribonuclease activity A [Bacillus cereus BDRD-ST26]
gi|300118302|ref|ZP_07056049.1| ribonuclease activity regulator protein RraA [Bacillus cereus SJ1]
gi|375285228|ref|YP_005105667.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Bacillus cereus NC7401]
gi|423353014|ref|ZP_17330641.1| RraA family protein [Bacillus cereus IS075]
gi|423373160|ref|ZP_17350500.1| RraA family protein [Bacillus cereus AND1407]
gi|423567794|ref|ZP_17544041.1| RraA family protein [Bacillus cereus MSX-A12]
gi|217064970|gb|ACJ79220.1| protein of unknown function [Bacillus cereus AH187]
gi|228643592|gb|EEK99858.1| Regulator of ribonuclease activity A [Bacillus cereus BDRD-ST26]
gi|298724271|gb|EFI64966.1| ribonuclease activity regulator protein RraA [Bacillus cereus SJ1]
gi|358353755|dbj|BAL18927.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase,
putative [Bacillus cereus NC7401]
gi|401090593|gb|EJP98749.1| RraA family protein [Bacillus cereus IS075]
gi|401096983|gb|EJQ05015.1| RraA family protein [Bacillus cereus AND1407]
gi|401212312|gb|EJR19056.1| RraA family protein [Bacillus cereus MSX-A12]
Length = 159
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISEKSL 157
>gi|52142229|ref|YP_084599.1| ribonuclease activity regulator protein RraA [Bacillus cereus E33L]
gi|61215850|sp|Q638R8.1|RRAAH_BACCZ RecName: Full=Putative regulator of ribonuclease activity
gi|51975698|gb|AAU17248.1| S-adenosylmethionine: demethylmenaquinone methyltransferase
[Bacillus cereus E33L]
Length = 159
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G G++++ + GG +++Y D DG++IS L
Sbjct: 119 VKEGKGDRNISLQFGGVEWKPNDYVYVDEDGVIISEKSL 157
>gi|423522867|ref|ZP_17499340.1| RraA family protein [Bacillus cereus HuA4-10]
gi|401173025|gb|EJQ80238.1| RraA family protein [Bacillus cereus HuA4-10]
Length = 161
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD Q EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDEFEQ-----ELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNISLQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|418418334|ref|ZP_12991521.1| hypothetical protein MBOL_00660 [Mycobacterium abscessus subsp.
bolletii BD]
gi|364002459|gb|EHM23649.1| hypothetical protein MBOL_00660 [Mycobacterium abscessus subsp.
bolletii BD]
Length = 162
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 84/131 (64%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG R VF+G I T++ DN L++ L E +G VLV+DGGGSL CA++G A +
Sbjct: 32 YGARPVFAGVITTVRCHHDNALLKSVLSEPSSGGVLVIDGGGSLHCALVGDVIAGLAVAS 91
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
GW+G+V+NG +RD E+ DIG++AL ++P K +K G GE+ V ++ GG + G Y
Sbjct: 92 GWSGLVINGVVRDSAELATMDIGIKALGTNPRKGHKTGAGERDVVVSFGGVDFTPGAICY 151
Query: 152 ADTDGILISRA 162
AD DG+++ A
Sbjct: 152 ADHDGVVVVPA 162
>gi|365868103|ref|ZP_09407656.1| hypothetical protein MMAS_00560 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|397678320|ref|YP_006519855.1| regulator of ribonuclease activity [Mycobacterium massiliense str.
GO 06]
gi|414581309|ref|ZP_11438449.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-1215]
gi|418250393|ref|ZP_12876637.1| hypothetical protein MAB47J26_16585 [Mycobacterium abscessus 47J26]
gi|420879651|ref|ZP_15343018.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0304]
gi|420886835|ref|ZP_15350195.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0421]
gi|420887168|ref|ZP_15350526.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0422]
gi|420895239|ref|ZP_15358578.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0708]
gi|420900631|ref|ZP_15363962.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0817]
gi|420906445|ref|ZP_15369763.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-1212]
gi|420934252|ref|ZP_15397525.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-151-0930]
gi|420935623|ref|ZP_15398893.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-152-0914]
gi|420944512|ref|ZP_15407767.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-153-0915]
gi|420949276|ref|ZP_15412525.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-154-0310]
gi|420954618|ref|ZP_15417860.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0626]
gi|420958791|ref|ZP_15422025.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0107]
gi|420959482|ref|ZP_15422714.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-1231]
gi|420975020|ref|ZP_15438210.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0921]
gi|420994722|ref|ZP_15457868.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0307]
gi|420995687|ref|ZP_15458830.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0912-R]
gi|421005035|ref|ZP_15468157.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0912-S]
gi|421049117|ref|ZP_15512112.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|353449629|gb|EHB98025.1| hypothetical protein MAB47J26_16585 [Mycobacterium abscessus 47J26]
gi|364001474|gb|EHM22669.1| hypothetical protein MMAS_00560 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392082598|gb|EIU08424.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0421]
gi|392084560|gb|EIU10385.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0304]
gi|392093882|gb|EIU19678.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0422]
gi|392094551|gb|EIU20346.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0708]
gi|392097992|gb|EIU23786.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0817]
gi|392104349|gb|EIU30135.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-1212]
gi|392116461|gb|EIU42229.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-1215]
gi|392132664|gb|EIU58409.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-151-0930]
gi|392146118|gb|EIU71842.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-153-0915]
gi|392147130|gb|EIU72851.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-152-0914]
gi|392150317|gb|EIU76030.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
1S-154-0310]
gi|392153531|gb|EIU79238.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0626]
gi|392160138|gb|EIU85831.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
5S-0921]
gi|392180824|gb|EIV06476.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0307]
gi|392191507|gb|EIV17132.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0912-R]
gi|392193738|gb|EIV19362.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0912-S]
gi|392241030|gb|EIV66520.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
CCUG 48898]
gi|392248517|gb|EIV73993.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-0107]
gi|392257501|gb|EIV82953.1| 2-demethylmenaquinone methyltransferase [Mycobacterium massiliense
2B-1231]
gi|395456585|gb|AFN62248.1| Putative regulator of ribonuclease activity [Mycobacterium
massiliense str. GO 06]
Length = 162
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 84/131 (64%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG R VF+G I T++ DN L++ L E +G VLV+DGGGSL CA++G A +
Sbjct: 32 YGARPVFAGVITTVRCHHDNALLKSILSEPSSGGVLVIDGGGSLHCALVGDVIAGLAVAS 91
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
GW+G+V+NG +RD E+ DIG++AL ++P K +K G GE+ V ++ GG + G Y
Sbjct: 92 GWSGLVINGVVRDSAELATMDIGIKALGTNPRKGHKTGAGERDVVVSFGGIDFTPGAICY 151
Query: 152 ADTDGILISRA 162
AD DG+++ A
Sbjct: 152 ADHDGVVVVPA 162
>gi|424807572|ref|ZP_18232980.1| ribonuclease activity regulator protein RraA [Vibrio mimicus SX-4]
gi|342325514|gb|EGU21294.1| ribonuclease activity regulator protein RraA [Vibrio mimicus SX-4]
Length = 162
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 6 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 60
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G++V G +RDV ++ D+G++AL + P K
Sbjct: 61 VLVVDGHGSCHKALMGDQLAILAIENDWEGVIVYGAVRDVVAMSEMDLGIKALGTCPFKT 120
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S +L V
Sbjct: 121 EKRGAGQINVTLTMQNQIVEPGDYLYADWNGILMSETQLEV 161
>gi|377564928|ref|ZP_09794236.1| regulator of ribonuclease activity A [Gordonia sputi NBRC 100414]
gi|377527816|dbj|GAB39401.1| regulator of ribonuclease activity A [Gordonia sputi NBRC 100414]
Length = 164
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 8 LTFTPTADLVDE-----IGADVRSCDLQFTQYGGVREFVGTVTTVRCFQDNALLKSILGE 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+ NG IRD I G +IGV+AL +
Sbjct: 63 SNPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIANGAIRDAKTIGGMEIGVKALGT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ VP+T+GG + G+ +Y+D DGI++
Sbjct: 123 NPRKSTKTGAGERDVPLTLGGVTFTPGDTVYSDDDGIVL 161
>gi|85060148|ref|YP_455850.1| ribonuclease activity regulator protein RraA [Sodalis glossinidius
str. 'morsitans']
gi|123518773|sp|Q2NQY0.1|RRAA_SODGM RecName: Full=Regulator of ribonuclease activity A
gi|84780668|dbj|BAE75445.1| menaquinone biosynthesis protein [Sodalis glossinidius str.
'morsitans']
Length = 161
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 11/164 (6%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I T+K FEDN L+ + L+E G+GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFTNFGGRTSFGGQITTVKCFEDNGLLYDLLQENGHGR 59
Query: 66 VLVVDGGGSLRCAILG---GNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
VL+VDGGGS+R A++ GN VQ N W GIVV G +R VD++ D+G++A+A+ P
Sbjct: 60 VLLVDGGGSVRRALIDAELGNLAVQ---NEWEGIVVYGAVRQVDDLEELDLGIQAMAATP 116
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A +GIGE + GG G+ LYAD G+++S+ L +
Sbjct: 117 AGAASEGIGESDTRVNFGGVTFFSGDHLYADNTGVILSKDALDL 160
>gi|359445490|ref|ZP_09235224.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20439]
gi|392555771|ref|ZP_10302908.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
undina NCIMB 2128]
gi|358040677|dbj|GAA71473.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20439]
Length = 165
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIR+ L + G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIRQLLSQDGTD 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
++L++DGGGS R A++ A N W GI+V G +R VDE+ D+G++A+AS P+
Sbjct: 59 QILLIDGGGSTRRALIDIELAELALENNWQGIIVYGALRHVDELEELDLGIQAIASIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ +G GE + + G D +++YAD+ GI++S
Sbjct: 119 ADSEGAGESGIGVNFAGVSFFDDDFVYADSTGIVLS 154
>gi|228928369|ref|ZP_04091410.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228831416|gb|EEM77012.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 159
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD +L+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKDLQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ + + G E++YAD DG++IS L
Sbjct: 119 VKEGKGERDISLQFGQVEWKPNEYVYADEDGVIISEKSL 157
>gi|424660865|ref|ZP_18098112.1| regulator of ribonuclease activity A [Vibrio cholerae HE-16]
gi|408050027|gb|EKG85204.1| regulator of ribonuclease activity A [Vibrio cholerae HE-16]
Length = 161
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 5 TPDLCDK-----YESQITLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 60 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 120 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 160
>gi|260775183|ref|ZP_05884081.1| ribonuclease E inhibitor RraA [Vibrio coralliilyticus ATCC BAA-450]
gi|260608884|gb|EEX35046.1| ribonuclease E inhibitor RraA [Vibrio coralliilyticus ATCC BAA-450]
Length = 161
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + + S +L P+ +G + F G IVT++ + DN +RE L + G G+
Sbjct: 5 TPDICDKHEDKVTSLDL----PL-HTFGNKSAFWGEIVTVRCYHDNSKVRETLSQDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS + A+LG V+ A +N W G++V G IRD + ++GV+AL + P K
Sbjct: 60 VLIVDGHGSCQKALLGDQLVILAIDNNWEGVIVYGAIRDAAAMAEMELGVKALGTSPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K+G G+ +V +TI I G+++YAD +G+L S
Sbjct: 120 EKRGAGDTNVTLTIHNQMIQPGDYVYADWNGVLTS 154
>gi|254284082|ref|ZP_04959050.1| S-adenosylmethionine:2-demethylmenaquinonemethyl transferase [gamma
proteobacterium NOR51-B]
gi|219680285|gb|EED36634.1| S-adenosylmethionine:2-demethylmenaquinonemethyl transferase [gamma
proteobacterium NOR51-B]
Length = 162
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Query: 12 ANPQLIVSGELRALQPI-FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVD 70
A P L + + P +Q +GRR +F GP T+ FEDN + E + E G GRVL+VD
Sbjct: 7 ATPDLSDDCPVAQVLPFQWQRFGRRVIFGGPASTVACFEDNSRVAEAVAEAGEGRVLLVD 66
Query: 71 GGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGI 130
G GSL ++LG +A +NGWAG++V G +RDV+ I+ DIGV +L P K K+
Sbjct: 67 GQGSLDRSLLGDRLARKAGDNGWAGVIVIGAVRDVEVIDDIDIGVYSLGVCPRKTEKRDR 126
Query: 131 GEKHVPITIGGTRISDGEWLYADTDGILIS 160
G++ + + G +S G W+YAD +G+L+S
Sbjct: 127 GDRDISLEWRGITVSPGHWIYADRNGVLVS 156
>gi|407803279|ref|ZP_11150115.1| ribonuclease activity regulator protein RraA [Alcanivorax sp.
W11-5]
gi|407022648|gb|EKE34399.1| ribonuclease activity regulator protein RraA [Alcanivorax sp.
W11-5]
Length = 160
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 86/136 (63%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
++ +G R F G I T+K FEDN ++E L G G+VL+VDGGGSLR A++G A
Sbjct: 24 WRSFGGRSAFGGQIDTVKCFEDNSRVKEQLATPGKGKVLLVDGGGSLRNALIGDMIAENA 83
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
NGW G+++ G RDVD + DIGV L P+K+ ++G G+ ++P++ GG G+
Sbjct: 84 VENGWEGVIIYGACRDVDALAQLDIGVITLGCVPIKSVRRGEGQLNIPVSFGGVTFQPGQ 143
Query: 149 WLYADTDGILISRAEL 164
W+YAD +GI+++ L
Sbjct: 144 WVYADNNGIIVADKAL 159
>gi|260219611|emb|CBA26456.1| Regulator of ribonuclease activity A [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 177
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 9/171 (5%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
A +T + CD + + SG+ R L P+F+ +G + F GP+ T++ FEDN +++ ++ +
Sbjct: 7 APFSTCDFCDVH-KNDQSGDFRVLPPVFKDFGGLKTFMGPVYTVQCFEDNTFVKQAVDSQ 65
Query: 62 GN--------GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDI 113
G +VLVVDGG SLR A+LGGN A NGWAG++++GC+RD+ E+ +
Sbjct: 66 GWIDTPIGRVAQVLVVDGGASLRRALLGGNLAAAAARNGWAGVLIDGCVRDLAELEQQQV 125
Query: 114 GVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
G+ ALA P+ K+ G +P+ I G + GEWLYAD DG+++S L
Sbjct: 126 GILALAPMPLPTEKRQQGLVQLPVRIQGVWVRPGEWLYADRDGVVVSSKPL 176
>gi|423586295|ref|ZP_17562382.1| RraA family protein [Bacillus cereus VD045]
gi|401231038|gb|EJR37543.1| RraA family protein [Bacillus cereus VD045]
Length = 159
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+ + F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKTEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVDWNPNEYVYADEDGVIISEKSL 157
>gi|169627212|ref|YP_001700861.1| hypothetical protein MAB_0107c [Mycobacterium abscessus ATCC 19977]
gi|419711284|ref|ZP_14238748.1| hypothetical protein OUW_17157 [Mycobacterium abscessus M93]
gi|419714035|ref|ZP_14241455.1| hypothetical protein S7W_06207 [Mycobacterium abscessus M94]
gi|420861941|ref|ZP_15325337.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0303]
gi|420871376|ref|ZP_15334758.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|420875827|ref|ZP_15339203.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|420912741|ref|ZP_15376053.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0125-R]
gi|420916214|ref|ZP_15379518.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0125-S]
gi|420921018|ref|ZP_15384315.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0728-S]
gi|420930025|ref|ZP_15393304.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-1108]
gi|420969720|ref|ZP_15432923.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0810-R]
gi|420975173|ref|ZP_15438361.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0212]
gi|420985748|ref|ZP_15448915.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0728-R]
gi|420988318|ref|ZP_15451474.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0206]
gi|421009491|ref|ZP_15472600.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0119-R]
gi|421010578|ref|ZP_15473682.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0122-R]
gi|421021012|ref|ZP_15484068.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0122-S]
gi|421025466|ref|ZP_15488509.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0731]
gi|421031265|ref|ZP_15494295.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0930-R]
gi|421036552|ref|ZP_15499569.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0930-S]
gi|421037629|ref|ZP_15500641.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0116-R]
gi|421046176|ref|ZP_15509176.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0116-S]
gi|169239179|emb|CAM60207.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|382940174|gb|EIC64500.1| hypothetical protein OUW_17157 [Mycobacterium abscessus M93]
gi|382945974|gb|EIC70264.1| hypothetical protein S7W_06207 [Mycobacterium abscessus M94]
gi|392067302|gb|EIT93150.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0726-RB]
gi|392070846|gb|EIT96693.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0726-RA]
gi|392077102|gb|EIU02933.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0303]
gi|392114735|gb|EIU40504.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0125-R]
gi|392120354|gb|EIU46120.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0125-S]
gi|392127013|gb|EIU52764.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-1108]
gi|392130854|gb|EIU56600.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0728-S]
gi|392170744|gb|EIU96422.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0728-R]
gi|392175299|gb|EIV00961.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
6G-0212]
gi|392182597|gb|EIV08248.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0206]
gi|392195097|gb|EIV20716.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0119-R]
gi|392206735|gb|EIV32318.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0122-S]
gi|392208989|gb|EIV34561.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0731]
gi|392216689|gb|EIV42232.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0122-R]
gi|392219147|gb|EIV44672.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0930-R]
gi|392220404|gb|EIV45928.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0930-S]
gi|392229310|gb|EIV54821.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0116-R]
gi|392235629|gb|EIV61127.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
4S-0116-S]
gi|392245376|gb|EIV70854.1| 2-demethylmenaquinone methyltransferase [Mycobacterium abscessus
3A-0810-R]
Length = 162
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 84/131 (64%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG R VF+G I T++ DN L++ L E +G VLV+DGGGSL CA++G A +
Sbjct: 32 YGARPVFAGVITTVRCHHDNALLKSVLSEPSSGGVLVIDGGGSLHCALVGDVIAGLAVAS 91
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
GW+G+V+NG +RD E+ DIG++AL ++P K +K G GE+ V ++ GG + G Y
Sbjct: 92 GWSGLVINGVVRDSAELATMDIGIKALGTNPRKGHKTGAGERDVVVSFGGIDFTPGAICY 151
Query: 152 ADTDGILISRA 162
AD DG+++ A
Sbjct: 152 ADHDGVVVVPA 162
>gi|167631803|ref|ZP_02390130.1| protein of unknown function [Bacillus anthracis str. A0442]
gi|170684769|ref|ZP_02875994.1| protein of unknown function [Bacillus anthracis str. A0465]
gi|196032191|ref|ZP_03099605.1| protein of unknown function [Bacillus cereus W]
gi|218904457|ref|YP_002452291.1| ribonuclease activity regulator protein RraA [Bacillus cereus
AH820]
gi|228936801|ref|ZP_04099587.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228946946|ref|ZP_04109243.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229122850|ref|ZP_04252059.1| Regulator of ribonuclease activity A [Bacillus cereus 95/8201]
gi|254685892|ref|ZP_05149751.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. CNEVA-9066]
gi|254723295|ref|ZP_05185083.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. A1055]
gi|254742471|ref|ZP_05200156.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. Kruger B]
gi|421636931|ref|ZP_16077529.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. BF1]
gi|167532101|gb|EDR94737.1| protein of unknown function [Bacillus anthracis str. A0442]
gi|170671029|gb|EDT21767.1| protein of unknown function [Bacillus anthracis str. A0465]
gi|195994942|gb|EDX58896.1| protein of unknown function [Bacillus cereus W]
gi|218535354|gb|ACK87752.1| protein of unknown function [Bacillus cereus AH820]
gi|228660714|gb|EEL16345.1| Regulator of ribonuclease activity A [Bacillus cereus 95/8201]
gi|228812678|gb|EEM59002.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228822846|gb|EEM68692.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|403395727|gb|EJY92965.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. BF1]
Length = 159
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQPFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISEKSL 157
>gi|359765851|ref|ZP_09269670.1| regulator of ribonuclease activity A [Gordonia polyisoprenivorans
NBRC 16320]
gi|359316487|dbj|GAB22503.1| regulator of ribonuclease activity A [Gordonia polyisoprenivorans
NBRC 16320]
Length = 165
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 8 LTFTPTADLVDE-----IGADVRSCDVQFTQYGGVREFVGRVSTVRCFQDNALLKSVLGE 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG S+ A++G ++NGWAGI+VNG IRD I G IGV+AL +
Sbjct: 63 SNPGGVLVVDGDASVHTALVGDLIAELGRSNGWAGIIVNGAIRDAKTIGGMGIGVKALGT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRA 162
+P K+ K G GE+ VPI +GG G+ LY+D DGI++ A
Sbjct: 123 NPRKSTKTGAGERDVPIDLGGITFVPGDTLYSDDDGIVLVAA 164
>gi|378715865|ref|YP_005280754.1| ribonuclease activity A regulator [Gordonia polyisoprenivorans VH2]
gi|375750568|gb|AFA71388.1| regulator of ribonuclease activity A [Gordonia polyisoprenivorans
VH2]
Length = 165
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 8 LTFTPTADLVDE-----IGADVRSCDVQFTQYGGVREFVGRVSTVRCFQDNALLKSVLGE 62
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG S+ A++G ++NGWAGI+VNG IRD I G IGV+AL +
Sbjct: 63 SNPGGVLVVDGDASVHTALVGDLIAELGRSNGWAGIIVNGAIRDAKTIGGMGIGVKALGT 122
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRA 162
+P K+ K G GE+ VPI +GG G+ LY+D DGI++ A
Sbjct: 123 NPRKSTKTGAGERDVPIELGGITFVPGDTLYSDDDGIVLVAA 164
>gi|423550979|ref|ZP_17527306.1| RraA family protein [Bacillus cereus ISP3191]
gi|401188312|gb|EJQ95380.1| RraA family protein [Bacillus cereus ISP3191]
Length = 159
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQPFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISEKSL 157
>gi|254849488|ref|ZP_05238838.1| ribonuclease activity regulator protein RraA [Vibrio cholerae MO10]
gi|360036238|ref|YP_004938001.1| regulator of ribonuclease activity A [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742156|ref|YP_005334125.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
IEC224]
gi|417814384|ref|ZP_12461037.1| regulator of ribonuclease activity A [Vibrio cholerae HC-49A2]
gi|417818124|ref|ZP_12464752.1| regulator of ribonuclease activity A [Vibrio cholerae HCUF01]
gi|417821686|ref|ZP_12468300.1| regulator of ribonuclease activity A [Vibrio cholerae HE39]
gi|417825589|ref|ZP_12472177.1| regulator of ribonuclease activity A [Vibrio cholerae HE48]
gi|418335369|ref|ZP_12944278.1| regulator of ribonuclease activity A [Vibrio cholerae HC-06A1]
gi|418339332|ref|ZP_12948222.1| regulator of ribonuclease activity A [Vibrio cholerae HC-23A1]
gi|418346902|ref|ZP_12951657.1| regulator of ribonuclease activity A [Vibrio cholerae HC-28A1]
gi|418350661|ref|ZP_12955392.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43A1]
gi|418356017|ref|ZP_12958736.1| regulator of ribonuclease activity A [Vibrio cholerae HC-61A1]
gi|419827313|ref|ZP_14350812.1| rraA family protein [Vibrio cholerae CP1033(6)]
gi|419830806|ref|ZP_14354291.1| rraA family protein [Vibrio cholerae HC-1A2]
gi|419834490|ref|ZP_14357945.1| rraA family protein [Vibrio cholerae HC-61A2]
gi|419838062|ref|ZP_14361500.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46B1]
gi|421318281|ref|ZP_15768849.1| regulator of ribonuclease activity A [Vibrio cholerae CP1032(5)]
gi|421322117|ref|ZP_15772670.1| regulator of ribonuclease activity A [Vibrio cholerae CP1038(11)]
gi|421325915|ref|ZP_15776439.1| regulator of ribonuclease activity A [Vibrio cholerae CP1041(14)]
gi|421329573|ref|ZP_15780083.1| regulator of ribonuclease activity A [Vibrio cholerae CP1042(15)]
gi|421333529|ref|ZP_15784006.1| regulator of ribonuclease activity A [Vibrio cholerae CP1046(19)]
gi|421337073|ref|ZP_15787534.1| regulator of ribonuclease activity A [Vibrio cholerae CP1048(21)]
gi|421340499|ref|ZP_15790931.1| regulator of ribonuclease activity A [Vibrio cholerae HC-20A2]
gi|421344586|ref|ZP_15794989.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43B1]
gi|421348293|ref|ZP_15798670.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46A1]
gi|421352074|ref|ZP_15802439.1| regulator of ribonuclease activity A [Vibrio cholerae HE-25]
gi|421355055|ref|ZP_15805387.1| regulator of ribonuclease activity A [Vibrio cholerae HE-45]
gi|422308302|ref|ZP_16395453.1| rraA family protein [Vibrio cholerae CP1035(8)]
gi|422897456|ref|ZP_16934898.1| regulator of ribonuclease activity A [Vibrio cholerae HC-40A1]
gi|422903655|ref|ZP_16938622.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48A1]
gi|422907540|ref|ZP_16942335.1| regulator of ribonuclease activity A [Vibrio cholerae HC-70A1]
gi|422914382|ref|ZP_16948886.1| regulator of ribonuclease activity A [Vibrio cholerae HFU-02]
gi|422918199|ref|ZP_16952514.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02A1]
gi|422923660|ref|ZP_16956806.1| regulator of ribonuclease activity A [Vibrio cholerae BJG-01]
gi|422926586|ref|ZP_16959598.1| regulator of ribonuclease activity A [Vibrio cholerae HC-38A1]
gi|423145909|ref|ZP_17133502.1| regulator of ribonuclease activity A [Vibrio cholerae HC-19A1]
gi|423150585|ref|ZP_17137898.1| regulator of ribonuclease activity A [Vibrio cholerae HC-21A1]
gi|423154420|ref|ZP_17141584.1| regulator of ribonuclease activity A [Vibrio cholerae HC-22A1]
gi|423157487|ref|ZP_17144579.1| regulator of ribonuclease activity A [Vibrio cholerae HC-32A1]
gi|423161058|ref|ZP_17147997.1| regulator of ribonuclease activity A [Vibrio cholerae HC-33A2]
gi|423165885|ref|ZP_17152607.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48B2]
gi|423731913|ref|ZP_17705215.1| rraA family protein [Vibrio cholerae HC-17A1]
gi|423736022|ref|ZP_17709214.1| rraA family protein [Vibrio cholerae HC-41B1]
gi|423770143|ref|ZP_17713485.1| rraA family protein [Vibrio cholerae HC-50A2]
gi|423823099|ref|ZP_17717107.1| rraA family protein [Vibrio cholerae HC-55C2]
gi|423857062|ref|ZP_17720912.1| rraA family protein [Vibrio cholerae HC-59A1]
gi|423884335|ref|ZP_17724502.1| rraA family protein [Vibrio cholerae HC-60A1]
gi|423896373|ref|ZP_17727528.1| rraA family protein [Vibrio cholerae HC-62A1]
gi|423931899|ref|ZP_17731921.1| rraA family protein [Vibrio cholerae HC-77A1]
gi|423957660|ref|ZP_17735403.1| rraA family protein [Vibrio cholerae HE-40]
gi|423985644|ref|ZP_17738958.1| rraA family protein [Vibrio cholerae HE-46]
gi|423998623|ref|ZP_17741873.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02C1]
gi|424003335|ref|ZP_17746409.1| regulator of ribonuclease activity A [Vibrio cholerae HC-17A2]
gi|424007128|ref|ZP_17750097.1| regulator of ribonuclease activity A [Vibrio cholerae HC-37A1]
gi|424010357|ref|ZP_17753291.1| regulator of ribonuclease activity A [Vibrio cholerae HC-44C1]
gi|424017522|ref|ZP_17757349.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55B2]
gi|424020443|ref|ZP_17760224.1| regulator of ribonuclease activity A [Vibrio cholerae HC-59B1]
gi|424025108|ref|ZP_17764757.1| regulator of ribonuclease activity A [Vibrio cholerae HC-62B1]
gi|424027994|ref|ZP_17767595.1| regulator of ribonuclease activity A [Vibrio cholerae HC-69A1]
gi|424587273|ref|ZP_18026851.1| regulator of ribonuclease activity A [Vibrio cholerae CP1030(3)]
gi|424592063|ref|ZP_18031487.1| regulator of ribonuclease activity A [Vibrio cholerae CP1037(10)]
gi|424595926|ref|ZP_18035244.1| regulator of ribonuclease activity A [Vibrio cholerae CP1040(13)]
gi|424599837|ref|ZP_18039015.1| regulator of ribonuclease activity A [Vibrio Cholerae CP1044(17)]
gi|424602596|ref|ZP_18041736.1| regulator of ribonuclease activity A [Vibrio cholerae CP1047(20)]
gi|424607533|ref|ZP_18046473.1| regulator of ribonuclease activity A [Vibrio cholerae CP1050(23)]
gi|424611352|ref|ZP_18050190.1| regulator of ribonuclease activity A [Vibrio cholerae HC-39A1]
gi|424614171|ref|ZP_18052955.1| regulator of ribonuclease activity A [Vibrio cholerae HC-41A1]
gi|424618141|ref|ZP_18056811.1| regulator of ribonuclease activity A [Vibrio cholerae HC-42A1]
gi|424622924|ref|ZP_18061428.1| regulator of ribonuclease activity A [Vibrio cholerae HC-47A1]
gi|424625821|ref|ZP_18064280.1| regulator of ribonuclease activity A [Vibrio cholerae HC-50A1]
gi|424630306|ref|ZP_18068588.1| regulator of ribonuclease activity A [Vibrio cholerae HC-51A1]
gi|424634354|ref|ZP_18072452.1| regulator of ribonuclease activity A [Vibrio cholerae HC-52A1]
gi|424637431|ref|ZP_18075437.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55A1]
gi|424641336|ref|ZP_18079216.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A1]
gi|424645886|ref|ZP_18083620.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A2]
gi|424649404|ref|ZP_18087065.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A1]
gi|424653658|ref|ZP_18091037.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A2]
gi|424657477|ref|ZP_18094761.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A2]
gi|443504707|ref|ZP_21071660.1| regulator of ribonuclease activity A [Vibrio cholerae HC-64A1]
gi|443508608|ref|ZP_21075366.1| regulator of ribonuclease activity A [Vibrio cholerae HC-65A1]
gi|443512452|ref|ZP_21079085.1| regulator of ribonuclease activity A [Vibrio cholerae HC-67A1]
gi|443516007|ref|ZP_21082514.1| regulator of ribonuclease activity A [Vibrio cholerae HC-68A1]
gi|443519799|ref|ZP_21086189.1| regulator of ribonuclease activity A [Vibrio cholerae HC-71A1]
gi|443524694|ref|ZP_21090900.1| regulator of ribonuclease activity A [Vibrio cholerae HC-72A2]
gi|443528322|ref|ZP_21094362.1| regulator of ribonuclease activity A [Vibrio cholerae HC-78A1]
gi|443532282|ref|ZP_21098296.1| regulator of ribonuclease activity A [Vibrio cholerae HC-7A1]
gi|443536094|ref|ZP_21101962.1| regulator of ribonuclease activity A [Vibrio cholerae HC-80A1]
gi|443539624|ref|ZP_21105477.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A1]
gi|33302630|sp|Q9KPK1.2|RRAAH_VIBCH RecName: Full=Putative regulator of ribonuclease activity
gi|254845193|gb|EET23607.1| ribonuclease activity regulator protein RraA [Vibrio cholerae MO10]
gi|340035720|gb|EGQ96698.1| regulator of ribonuclease activity A [Vibrio cholerae HCUF01]
gi|340036870|gb|EGQ97846.1| regulator of ribonuclease activity A [Vibrio cholerae HC-49A2]
gi|340039317|gb|EGR00292.1| regulator of ribonuclease activity A [Vibrio cholerae HE39]
gi|340047074|gb|EGR08004.1| regulator of ribonuclease activity A [Vibrio cholerae HE48]
gi|341620049|gb|EGS45829.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48A1]
gi|341620058|gb|EGS45837.1| regulator of ribonuclease activity A [Vibrio cholerae HC-70A1]
gi|341620785|gb|EGS46540.1| regulator of ribonuclease activity A [Vibrio cholerae HC-40A1]
gi|341635636|gb|EGS60344.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02A1]
gi|341636194|gb|EGS60896.1| regulator of ribonuclease activity A [Vibrio cholerae HFU-02]
gi|341643769|gb|EGS68040.1| regulator of ribonuclease activity A [Vibrio cholerae BJG-01]
gi|341645587|gb|EGS69716.1| regulator of ribonuclease activity A [Vibrio cholerae HC-38A1]
gi|356416404|gb|EHH70035.1| regulator of ribonuclease activity A [Vibrio cholerae HC-06A1]
gi|356417262|gb|EHH70880.1| regulator of ribonuclease activity A [Vibrio cholerae HC-21A1]
gi|356422153|gb|EHH75636.1| regulator of ribonuclease activity A [Vibrio cholerae HC-19A1]
gi|356427883|gb|EHH81121.1| regulator of ribonuclease activity A [Vibrio cholerae HC-22A1]
gi|356428292|gb|EHH81519.1| regulator of ribonuclease activity A [Vibrio cholerae HC-23A1]
gi|356429769|gb|EHH82980.1| regulator of ribonuclease activity A [Vibrio cholerae HC-28A1]
gi|356438957|gb|EHH91957.1| regulator of ribonuclease activity A [Vibrio cholerae HC-32A1]
gi|356444008|gb|EHH96824.1| regulator of ribonuclease activity A [Vibrio cholerae HC-33A2]
gi|356445157|gb|EHH97966.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43A1]
gi|356449749|gb|EHI02489.1| regulator of ribonuclease activity A [Vibrio cholerae HC-48B2]
gi|356452515|gb|EHI05194.1| regulator of ribonuclease activity A [Vibrio cholerae HC-61A1]
gi|356647392|gb|AET27447.1| regulator of ribonuclease activity A [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795666|gb|AFC59137.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
IEC224]
gi|395916539|gb|EJH27369.1| regulator of ribonuclease activity A [Vibrio cholerae CP1032(5)]
gi|395917753|gb|EJH28581.1| regulator of ribonuclease activity A [Vibrio cholerae CP1041(14)]
gi|395919111|gb|EJH29935.1| regulator of ribonuclease activity A [Vibrio cholerae CP1038(11)]
gi|395928107|gb|EJH38870.1| regulator of ribonuclease activity A [Vibrio cholerae CP1042(15)]
gi|395928931|gb|EJH39684.1| regulator of ribonuclease activity A [Vibrio cholerae CP1046(19)]
gi|395932172|gb|EJH42916.1| regulator of ribonuclease activity A [Vibrio cholerae CP1048(21)]
gi|395939782|gb|EJH50464.1| regulator of ribonuclease activity A [Vibrio cholerae HC-20A2]
gi|395940666|gb|EJH51347.1| regulator of ribonuclease activity A [Vibrio cholerae HC-43B1]
gi|395942872|gb|EJH53548.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46A1]
gi|395952519|gb|EJH63133.1| regulator of ribonuclease activity A [Vibrio cholerae HE-25]
gi|395954180|gb|EJH64793.1| regulator of ribonuclease activity A [Vibrio cholerae HE-45]
gi|395957837|gb|EJH68351.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A2]
gi|395958403|gb|EJH68891.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A2]
gi|395961133|gb|EJH71476.1| regulator of ribonuclease activity A [Vibrio cholerae HC-42A1]
gi|395970251|gb|EJH80037.1| regulator of ribonuclease activity A [Vibrio cholerae HC-47A1]
gi|395972216|gb|EJH81821.1| regulator of ribonuclease activity A [Vibrio cholerae CP1030(3)]
gi|395974923|gb|EJH84431.1| regulator of ribonuclease activity A [Vibrio cholerae CP1047(20)]
gi|408006305|gb|EKG44467.1| regulator of ribonuclease activity A [Vibrio cholerae HC-39A1]
gi|408011254|gb|EKG49079.1| regulator of ribonuclease activity A [Vibrio cholerae HC-41A1]
gi|408011279|gb|EKG49101.1| regulator of ribonuclease activity A [Vibrio cholerae HC-50A1]
gi|408017337|gb|EKG54846.1| regulator of ribonuclease activity A [Vibrio cholerae HC-52A1]
gi|408022372|gb|EKG59585.1| regulator of ribonuclease activity A [Vibrio cholerae HC-56A1]
gi|408022694|gb|EKG59891.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55A1]
gi|408029907|gb|EKG66595.1| regulator of ribonuclease activity A [Vibrio cholerae CP1037(10)]
gi|408030744|gb|EKG67390.1| regulator of ribonuclease activity A [Vibrio cholerae CP1040(13)]
gi|408031612|gb|EKG68224.1| regulator of ribonuclease activity A [Vibrio cholerae HC-57A1]
gi|408040832|gb|EKG76988.1| regulator of ribonuclease activity A [Vibrio Cholerae CP1044(17)]
gi|408042195|gb|EKG78259.1| regulator of ribonuclease activity A [Vibrio cholerae CP1050(23)]
gi|408052160|gb|EKG87215.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A2]
gi|408053791|gb|EKG88791.1| regulator of ribonuclease activity A [Vibrio cholerae HC-51A1]
gi|408608103|gb|EKK81506.1| rraA family protein [Vibrio cholerae CP1033(6)]
gi|408617771|gb|EKK90876.1| rraA family protein [Vibrio cholerae CP1035(8)]
gi|408620579|gb|EKK93591.1| rraA family protein [Vibrio cholerae HC-1A2]
gi|408622605|gb|EKK95582.1| rraA family protein [Vibrio cholerae HC-17A1]
gi|408629247|gb|EKL01953.1| rraA family protein [Vibrio cholerae HC-41B1]
gi|408632977|gb|EKL05393.1| rraA family protein [Vibrio cholerae HC-50A2]
gi|408634372|gb|EKL06630.1| rraA family protein [Vibrio cholerae HC-55C2]
gi|408639946|gb|EKL11749.1| rraA family protein [Vibrio cholerae HC-59A1]
gi|408640221|gb|EKL12018.1| rraA family protein [Vibrio cholerae HC-60A1]
gi|408649312|gb|EKL20629.1| rraA family protein [Vibrio cholerae HC-61A2]
gi|408653491|gb|EKL24653.1| rraA family protein [Vibrio cholerae HC-77A1]
gi|408654557|gb|EKL25697.1| rraA family protein [Vibrio cholerae HC-62A1]
gi|408656665|gb|EKL27759.1| rraA family protein [Vibrio cholerae HE-40]
gi|408663487|gb|EKL34356.1| rraA family protein [Vibrio cholerae HE-46]
gi|408844227|gb|EKL84359.1| regulator of ribonuclease activity A [Vibrio cholerae HC-37A1]
gi|408844984|gb|EKL85105.1| regulator of ribonuclease activity A [Vibrio cholerae HC-17A2]
gi|408852259|gb|EKL92097.1| regulator of ribonuclease activity A [Vibrio cholerae HC-02C1]
gi|408856610|gb|EKL96305.1| regulator of ribonuclease activity A [Vibrio cholerae HC-46B1]
gi|408859126|gb|EKL98792.1| regulator of ribonuclease activity A [Vibrio cholerae HC-55B2]
gi|408863387|gb|EKM02877.1| regulator of ribonuclease activity A [Vibrio cholerae HC-44C1]
gi|408866641|gb|EKM06018.1| regulator of ribonuclease activity A [Vibrio cholerae HC-59B1]
gi|408869716|gb|EKM09009.1| regulator of ribonuclease activity A [Vibrio cholerae HC-62B1]
gi|408878270|gb|EKM17280.1| regulator of ribonuclease activity A [Vibrio cholerae HC-69A1]
gi|443430917|gb|ELS73474.1| regulator of ribonuclease activity A [Vibrio cholerae HC-64A1]
gi|443434768|gb|ELS80917.1| regulator of ribonuclease activity A [Vibrio cholerae HC-65A1]
gi|443438510|gb|ELS88230.1| regulator of ribonuclease activity A [Vibrio cholerae HC-67A1]
gi|443442688|gb|ELS95994.1| regulator of ribonuclease activity A [Vibrio cholerae HC-68A1]
gi|443446552|gb|ELT03214.1| regulator of ribonuclease activity A [Vibrio cholerae HC-71A1]
gi|443449298|gb|ELT09596.1| regulator of ribonuclease activity A [Vibrio cholerae HC-72A2]
gi|443453329|gb|ELT17156.1| regulator of ribonuclease activity A [Vibrio cholerae HC-78A1]
gi|443457672|gb|ELT25069.1| regulator of ribonuclease activity A [Vibrio cholerae HC-7A1]
gi|443460719|gb|ELT31802.1| regulator of ribonuclease activity A [Vibrio cholerae HC-80A1]
gi|443464754|gb|ELT39415.1| regulator of ribonuclease activity A [Vibrio cholerae HC-81A1]
Length = 161
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 5 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 60 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 120 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 160
>gi|15642363|ref|NP_231996.1| ribonuclease activity regulator protein RraA [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121727511|ref|ZP_01680629.1| protein of unknown function [Vibrio cholerae V52]
gi|147674216|ref|YP_001217869.1| ribonuclease activity regulator protein RraA [Vibrio cholerae O395]
gi|153217269|ref|ZP_01951032.1| protein of unknown function [Vibrio cholerae 1587]
gi|153820395|ref|ZP_01973062.1| regulator of ribonuclease activity A [Vibrio cholerae NCTC 8457]
gi|153824233|ref|ZP_01976900.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825893|ref|ZP_01978560.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153828814|ref|ZP_01981481.1| protein of unknown function [Vibrio cholerae 623-39]
gi|227082490|ref|YP_002811041.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
M66-2]
gi|227118811|ref|YP_002820707.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae O395]
gi|229507568|ref|ZP_04397073.1| ribonuclease E inhibitor RraA [Vibrio cholerae BX 330286]
gi|229512236|ref|ZP_04401715.1| ribonuclease E inhibitor RraA [Vibrio cholerae B33]
gi|229519372|ref|ZP_04408815.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC9]
gi|229521201|ref|ZP_04410621.1| ribonuclease E inhibitor RraA [Vibrio cholerae TM 11079-80]
gi|229528642|ref|ZP_04418032.1| ribonuclease E inhibitor RraA [Vibrio cholerae 12129(1)]
gi|229607074|ref|YP_002877722.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
MJ-1236]
gi|254285974|ref|ZP_04960935.1| protein of unknown function [Vibrio cholerae AM-19226]
gi|255746954|ref|ZP_05420899.1| ribonuclease E inhibitor RraA [Vibrio cholera CIRS 101]
gi|262161502|ref|ZP_06030612.1| ribonuclease E inhibitor RraA [Vibrio cholerae INDRE 91/1]
gi|262168354|ref|ZP_06036051.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC27]
gi|298500272|ref|ZP_07010077.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae MAK 757]
gi|429884902|ref|ZP_19366507.1| Ribonuclease E inhibitor RraA [Vibrio cholerae PS15]
gi|440710594|ref|ZP_20891242.1| ribonuclease E inhibitor RraA [Vibrio cholerae 4260B]
gi|449055191|ref|ZP_21733859.1| Ribonuclease E inhibitor RraA [Vibrio cholerae O1 str. Inaba G4222]
gi|9656936|gb|AAF95509.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121630179|gb|EAX62581.1| protein of unknown function [Vibrio cholerae V52]
gi|124113704|gb|EAY32524.1| protein of unknown function [Vibrio cholerae 1587]
gi|126509063|gb|EAZ71657.1| regulator of ribonuclease activity A [Vibrio cholerae NCTC 8457]
gi|126518243|gb|EAZ75468.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146316099|gb|ABQ20638.1| protein of unknown function [Vibrio cholerae O395]
gi|148875690|gb|EDL73825.1| protein of unknown function [Vibrio cholerae 623-39]
gi|149740391|gb|EDM54522.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150423884|gb|EDN15824.1| protein of unknown function [Vibrio cholerae AM-19226]
gi|227010378|gb|ACP06590.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae M66-2]
gi|227014261|gb|ACP10471.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae O395]
gi|229332416|gb|EEN97902.1| ribonuclease E inhibitor RraA [Vibrio cholerae 12129(1)]
gi|229341733|gb|EEO06735.1| ribonuclease E inhibitor RraA [Vibrio cholerae TM 11079-80]
gi|229344061|gb|EEO09036.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC9]
gi|229352201|gb|EEO17142.1| ribonuclease E inhibitor RraA [Vibrio cholerae B33]
gi|229355073|gb|EEO19994.1| ribonuclease E inhibitor RraA [Vibrio cholerae BX 330286]
gi|229369729|gb|ACQ60152.1| ribonuclease E inhibitor RraA [Vibrio cholerae MJ-1236]
gi|255735356|gb|EET90756.1| ribonuclease E inhibitor RraA [Vibrio cholera CIRS 101]
gi|262023246|gb|EEY41950.1| ribonuclease E inhibitor RraA [Vibrio cholerae RC27]
gi|262028813|gb|EEY47467.1| ribonuclease E inhibitor RraA [Vibrio cholerae INDRE 91/1]
gi|297540965|gb|EFH77019.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio cholerae MAK 757]
gi|429228234|gb|EKY34162.1| Ribonuclease E inhibitor RraA [Vibrio cholerae PS15]
gi|439973923|gb|ELP50127.1| ribonuclease E inhibitor RraA [Vibrio cholerae 4260B]
gi|448265233|gb|EMB02468.1| Ribonuclease E inhibitor RraA [Vibrio cholerae O1 str. Inaba G4222]
Length = 162
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 6 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 60
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 61 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKT 120
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 121 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 161
>gi|257056039|ref|YP_003133871.1| RraA family protein [Saccharomonospora viridis DSM 43017]
gi|256585911|gb|ACU97044.1| RraA family protein [Saccharomonospora viridis DSM 43017]
Length = 155
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 87/143 (60%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
LR F+ +G R+ FSG + T+ +EDN L+RE L G+G VLVVDGGGS+ A+
Sbjct: 13 RLRVCDTQFRQFGGRRRFSGRVRTVSCYEDNGLVRELLRTPGDGCVLVVDGGGSVHTALT 72
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG +RD + +G++AL ++P K++K G G V + G
Sbjct: 73 GDLIAASAVENGWAGLVINGAVRDSAALAELPLGIKALGTNPRKSSKAGRGAVDVAVGFG 132
Query: 141 GTRISDGEWLYADTDGILISRAE 163
G G++LYAD DG+++ AE
Sbjct: 133 GVTFVPGDYLYADDDGVVLLPAE 155
>gi|408375519|ref|ZP_11173184.1| ribonuclease activity regulator protein RraA [Alcanivorax
hongdengensis A-11-3]
gi|407764596|gb|EKF73068.1| ribonuclease activity regulator protein RraA [Alcanivorax
hongdengensis A-11-3]
Length = 160
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 97/166 (58%), Gaps = 9/166 (5%)
Query: 1 MALVTTAEVCDANPQLI--VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFL 58
M+ VT ++CD N ++ V+G + YG R+ F G IVT+K FEDN ++ L
Sbjct: 1 MSFVT-CDLCDDNADIVSVVTGHH------WFSYGGRKAFGGEIVTVKCFEDNSRVKAHL 53
Query: 59 EEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRAL 118
G G+VLVVDGG SLR A++G A NGW G+++ G RDVDE+ DIGV L
Sbjct: 54 GTDGKGKVLVVDGGASLRNALIGDMIAENAVKNGWEGVIIYGACRDVDELAKLDIGVMTL 113
Query: 119 ASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
P+K+ ++ G+ ++ IT GG GE++YAD +GI+ + L
Sbjct: 114 GCVPIKSVRRDEGQLNIDITFGGVTFRPGEYVYADNNGIITAPKAL 159
>gi|206969238|ref|ZP_03230193.1| protein of unknown function [Bacillus cereus AH1134]
gi|206736279|gb|EDZ53437.1| protein of unknown function [Bacillus cereus AH1134]
Length = 159
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVV+GG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVEGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLHFGQVDWNPNEYVYADEDGVIISEKSL 157
>gi|229524358|ref|ZP_04413763.1| ribonuclease E inhibitor RraA [Vibrio cholerae bv. albensis VL426]
gi|229337939|gb|EEO02956.1| ribonuclease E inhibitor RraA [Vibrio cholerae bv. albensis VL426]
Length = 178
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 6 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 60
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 61 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKT 120
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 121 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 161
>gi|387891105|ref|YP_006321403.1| ribonuclease activity A regulator [Escherichia blattae DSM 4481]
gi|414594548|ref|ZP_11444184.1| regulator of ribonuclease activity A [Escherichia blattae NBRC
105725]
gi|386925938|gb|AFJ48892.1| regulator of ribonuclease activity A [Escherichia blattae DSM 4481]
gi|403194543|dbj|GAB81836.1| regulator of ribonuclease activity A [Escherichia blattae NBRC
105725]
Length = 161
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ E LEE G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRTSFGGQIITVKCFEDNGLLYEMLEENGQGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ + A N W GIVV G +R VD + D+G++A+A+ P A
Sbjct: 60 VLLVDGGGSVRRALIDADLARLAVQNEWEGIVVYGSVRQVDALEELDLGIQAIAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G+GE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGVGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
>gi|297580996|ref|ZP_06942921.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
RC385]
gi|297534822|gb|EFH73658.1| ribonuclease activity regulator protein RraA [Vibrio cholerae
RC385]
Length = 170
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 14 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 68
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 69 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKT 128
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 129 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 169
>gi|228915924|ref|ZP_04079499.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843742|gb|EEM88816.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 159
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+ + F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKEEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISEKSL 157
>gi|433457915|ref|ZP_20415880.1| ribonuclease activity regulator protein RraA [Arthrobacter
crystallopoietes BAB-32]
gi|432194149|gb|ELK50804.1| ribonuclease activity regulator protein RraA [Arthrobacter
crystallopoietes BAB-32]
Length = 161
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 83/141 (58%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL+++ F G FSGPI T++ EDN L++ L G G VLVVDGGGSL A++
Sbjct: 21 ELQSVVLQFLDLGGHTAFSGPIRTIRCHEDNGLVKSVLNSPGAGSVLVVDGGGSLNTALM 80
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG +RD + +G++AL S+P K+ K +GE VP+
Sbjct: 81 GDLIASAAVENGWAGVVINGPVRDRAVLATLPLGIKALGSNPRKSAKDSVGEVDVPVEFS 140
Query: 141 GTRISDGEWLYADTDGILISR 161
G G LYAD DGIL+ R
Sbjct: 141 GVVFRPGPMLYADLDGILVER 161
>gi|423483004|ref|ZP_17459694.1| RraA family protein [Bacillus cereus BAG6X1-2]
gi|401142409|gb|EJQ49956.1| RraA family protein [Bacillus cereus BAG6X1-2]
Length = 161
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + FQ YG+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFQSYGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N + AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASKNCALLGDNLAAIGEERNLAGIIVNGYVRDSSELKNINIGIVALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNILLQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|398997591|ref|ZP_10700410.1| RraA family protein [Pseudomonas sp. GM21]
gi|398123633|gb|EJM13175.1| RraA family protein [Pseudomonas sp. GM21]
Length = 160
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T+++CD P I R L PIFQ +G + F G TLK FEDN I+E G+
Sbjct: 3 VKTSDLCDQYPDSI-----RVLAPIFQDFGGKNDFEGRAFTLKCFEDNSRIKEISSLPGH 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS R A+ G NGWAG+++ G IRD + I ++AL + P
Sbjct: 58 GRVLVVDGGGSDRYALFGDVIAEDLVKNGWAGVMIYGYIRDKAALRDMPIAIKALGTSPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K K+ G+ + + G I+DG+ L+ D DG+++
Sbjct: 118 KTVKRNEGQIGITVEFAGHTIADGDQLFGDDDGVVL 153
>gi|27364009|ref|NP_759537.1| ribonuclease activity regulator protein RraA [Vibrio vulnificus
CMCP6]
gi|320157390|ref|YP_004189769.1| ribonuclease E inhibitor RraA [Vibrio vulnificus MO6-24/O]
gi|33301290|sp|Q8DEP0.1|RRAAH_VIBVU RecName: Full=Putative regulator of ribonuclease activity
gi|61216083|sp|Q7MNR7.2|RRAAH_VIBVY RecName: Full=Putative regulator of ribonuclease activity
gi|27360126|gb|AAO09064.1| Ribonuclease E inhibitor RraA [Vibrio vulnificus CMCP6]
gi|319932702|gb|ADV87566.1| ribonuclease E inhibitor RraA [Vibrio vulnificus MO6-24/O]
Length = 160
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + ++ L Q +G++ F G IVT++ + DN +R+ L E G G+
Sbjct: 5 TPDICDQH-----EDKVTLLNLPLQNFGQKAAFFGEIVTVRCYHDNSKVRDVLSENGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A N W G++V G +RDV +++ ++G++AL + P K
Sbjct: 60 VLVVDGHGSCQKALLGDQLAILAIENDWEGVIVFGAVRDVAQMSQMELGIKALGTSPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G GE +V +T+ + +++YAD +GILIS+ L
Sbjct: 120 EKRGAGEVNVTLTMHNQMVQPKDYIYADWNGILISKELLQ 159
>gi|229103846|ref|ZP_04234525.1| Regulator of ribonuclease activity A [Bacillus cereus Rock3-28]
gi|423546574|ref|ZP_17522932.1| RraA family protein [Bacillus cereus HuB5-5]
gi|228679549|gb|EEL33747.1| Regulator of ribonuclease activity A [Bacillus cereus Rock3-28]
gi|401180662|gb|EJQ87819.1| RraA family protein [Bacillus cereus HuB5-5]
Length = 159
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G +++Y D DGI+IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNDYVYVDEDGIIISEKSL 157
>gi|118478608|ref|YP_895759.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis str. Al Hakam]
gi|196042891|ref|ZP_03110130.1| protein of unknown function [Bacillus cereus 03BB108]
gi|229185552|ref|ZP_04312732.1| Regulator of ribonuclease activity A [Bacillus cereus BGSC 6E1]
gi|376267203|ref|YP_005119915.1| Ribonuclease E inhibitor RraA [Bacillus cereus F837/76]
gi|118417833|gb|ABK86252.1| regulator of ribonuclease acivity [Bacillus thuringiensis str. Al
Hakam]
gi|196026375|gb|EDX65043.1| protein of unknown function [Bacillus cereus 03BB108]
gi|228597947|gb|EEK55587.1| Regulator of ribonuclease activity A [Bacillus cereus BGSC 6E1]
gi|364513003|gb|AEW56402.1| Ribonuclease E inhibitor RraA [Bacillus cereus F837/76]
Length = 159
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG+++S L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIMSEKSL 157
>gi|410632505|ref|ZP_11343163.1| regulator of ribonuclease activity A protein 2 [Glaciecola arctica
BSs20135]
gi|410147931|dbj|GAC20030.1| regulator of ribonuclease activity A protein 2 [Glaciecola arctica
BSs20135]
Length = 161
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD + + + ++P+F +G R + G I T+K FED LI + LE+ G G+
Sbjct: 5 TSTLCD-----VFADSVDVVEPMFVSFGGRTSYGGEITTIKCFEDKGLILKTLEQPGLGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ + A +NGW GIV G +R+V E+ +IG+ A+AS P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSSAAQLAFDNGWEGIVCYGSVREVYELEEINIGIHAIASIPVSA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ + +GE V + GG + LYADT GI++S L +
Sbjct: 120 DDQELGEMDVAVNFGGVTFLPDDHLYADTTGIILSPEPLDL 160
>gi|320169306|gb|EFW46205.1| ribonuclease activity regulator protein RraA [Capsaspora owczarzaki
ATCC 30864]
Length = 157
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 15/164 (9%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQI--YGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
++TA+ CD S +++ + P Q +G+++ G T++ EDN +
Sbjct: 6 LSTADACDQ-----FSDKVQLVDPTIQWRWFGQKRAIRGFAATVRCLEDN-------SKP 53
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
GNGRVLVVDGGGS CA++G N WAGI+V GCIRD + +N D+GV AL ++
Sbjct: 54 GNGRVLVVDGGGSFNCALVGDQLGQLCITNNWAGIIVYGCIRDANVLNAMDVGVLALGTN 113
Query: 122 PMKANKKGIGEKHVPITIGGTR-ISDGEWLYADTDGILISRAEL 164
P K+N+ G+ VP+TIGG + D W+ AD DGIL+S + L
Sbjct: 114 PRKSNRANRGDCQVPVTIGGREFLPDATWVTADGDGILLSTSAL 157
>gi|407696264|ref|YP_006821052.1| regulator of ribonuclease activity [Alcanivorax dieselolei B5]
gi|407253602|gb|AFT70709.1| Putative regulator of ribonuclease activity [Alcanivorax dieselolei
B5]
Length = 160
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 85/133 (63%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG RQ F G IVT+K FEDN ++E L G G+VLVVDGGGSLR A++G A +N
Sbjct: 27 YGGRQAFGGEIVTVKCFEDNSRVKEQLATDGKGKVLVVDGGGSLRNALIGDMIAENAVSN 86
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
GW G+++ G RDV E+ D+GV L P+K+ ++G G+ ++ +T GG G+++Y
Sbjct: 87 GWEGVIIYGACRDVRELAKLDLGVVTLGCVPIKSVRRGEGQLNIDVTFGGVTFRPGDFVY 146
Query: 152 ADTDGILISRAEL 164
AD +G++ S L
Sbjct: 147 ADANGVISSTEAL 159
>gi|145221716|ref|YP_001132394.1| ribonuclease activity regulator protein RraA [Mycobacterium gilvum
PYR-GCK]
gi|189044039|sp|A4T3Z0.1|RRAAH_MYCGI RecName: Full=Putative regulator of ribonuclease activity
gi|145214202|gb|ABP43606.1| regulator of ribonuclease activity A [Mycobacterium gilvum PYR-GCK]
Length = 160
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 90/143 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
E+R+ + +G R F+GPI T++ FEDN L++ L E G+G VLVVDG GS+ A++
Sbjct: 18 EVRSCDLQMRQFGGRSEFAGPITTVRCFEDNALLKSVLSEPGDGGVLVVDGDGSVHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G ++NGW+G+++NG +RD + DIG++AL ++P K++K G G + + G
Sbjct: 78 GDVIAELGRSNGWSGLIINGAVRDASTLRTLDIGIKALGTNPRKSSKTGDGVRDAVVEFG 137
Query: 141 GTRISDGEWLYADTDGILISRAE 163
G + G+ Y+D DGI++ A+
Sbjct: 138 GVVFTPGDIAYSDDDGIVVVTAD 160
>gi|422911199|ref|ZP_16945825.1| regulator of ribonuclease activity A [Vibrio cholerae HE-09]
gi|341632109|gb|EGS56981.1| regulator of ribonuclease activity A [Vibrio cholerae HE-09]
Length = 161
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 5 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 60 VLIVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 120 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 160
>gi|184199870|ref|YP_001854077.1| ribonuclease regulator [Kocuria rhizophila DC2201]
gi|183580100|dbj|BAG28571.1| ribonuclease regulator [Kocuria rhizophila DC2201]
Length = 155
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 86/141 (60%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL+++ F G F+GPI T++ FE NV +++ + G G VLVVDG GS+ CA+L
Sbjct: 15 ELQSVTTQFISVGGVHRFTGPIRTVRCFESNVDVKKLVATPGEGAVLVVDGQGSMNCALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G N A NGWAG+V+N +RD E+ +IGV+AL ++P K++ GE V + G
Sbjct: 75 GDNVARTAMQNGWAGLVINAPVRDRVELGTLEIGVKALGTNPRKSSPNDFGETDVILNFG 134
Query: 141 GTRISDGEWLYADTDGILISR 161
G G+ L+AD DGIL+ R
Sbjct: 135 GVTFRPGKTLWADEDGILVER 155
>gi|30263277|ref|NP_845654.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. Ames]
gi|47528652|ref|YP_020001.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. 'Ames Ancestor']
gi|49186127|ref|YP_029379.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. Sterne]
gi|165868581|ref|ZP_02213241.1| protein of unknown function [Bacillus anthracis str. A0488]
gi|167637206|ref|ZP_02395486.1| protein of unknown function [Bacillus anthracis str. A0193]
gi|170705022|ref|ZP_02895487.1| protein of unknown function [Bacillus anthracis str. A0389]
gi|177649838|ref|ZP_02932839.1| protein of unknown function [Bacillus anthracis str. A0174]
gi|190564519|ref|ZP_03017440.1| protein of unknown function [Bacillus anthracis str.
Tsiankovskii-I]
gi|227813852|ref|YP_002813861.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. CDC 684]
gi|229601022|ref|YP_002867537.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. A0248]
gi|254738362|ref|ZP_05196065.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. Western North America USA6153]
gi|254752678|ref|ZP_05204714.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. Vollum]
gi|254761193|ref|ZP_05213217.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. Australia 94]
gi|386737079|ref|YP_006210260.1| Regulator of ribonuclease activity A [Bacillus anthracis str.
H9401]
gi|421510828|ref|ZP_15957714.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. UR-1]
gi|37088214|sp|Q81N49.1|RRAAH_BACAN RecName: Full=Putative regulator of ribonuclease activity
gi|30257911|gb|AAP27140.1| RraA family protein [Bacillus anthracis str. Ames]
gi|47503800|gb|AAT32476.1| protein of unknown function [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180054|gb|AAT55430.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase,
putative [Bacillus anthracis str. Sterne]
gi|164715307|gb|EDR20824.1| protein of unknown function [Bacillus anthracis str. A0488]
gi|167514713|gb|EDR90079.1| protein of unknown function [Bacillus anthracis str. A0193]
gi|170129877|gb|EDS98739.1| protein of unknown function [Bacillus anthracis str. A0389]
gi|172083790|gb|EDT68849.1| protein of unknown function [Bacillus anthracis str. A0174]
gi|190563836|gb|EDV17800.1| protein of unknown function [Bacillus anthracis str.
Tsiankovskii-I]
gi|227007840|gb|ACP17583.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229265430|gb|ACQ47067.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|384386931|gb|AFH84592.1| Regulator of ribonuclease activity A [Bacillus anthracis str.
H9401]
gi|401819170|gb|EJT18354.1| ribonuclease activity regulator protein RraA [Bacillus anthracis
str. UR-1]
Length = 159
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQPFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISDKSL 157
>gi|315446548|ref|YP_004079427.1| RraA family protein [Mycobacterium gilvum Spyr1]
gi|315264851|gb|ADU01593.1| RraA family protein [Mycobacterium gilvum Spyr1]
Length = 160
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 90/143 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
E+R+ + +G R F+GPI T++ FEDN L++ L E G+G VLVVDG GS+ A++
Sbjct: 18 EVRSCDLQMRQFGGRSEFAGPITTVRCFEDNALLKSVLSEPGDGGVLVVDGDGSVHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G ++NGW+G+++NG +RD + DIG++AL ++P K++K G G + + G
Sbjct: 78 GDVIAELGRSNGWSGLIINGAVRDASTLRTLDIGIKALGTNPRKSSKTGDGVRDAVVEFG 137
Query: 141 GTRISDGEWLYADTDGILISRAE 163
G + G+ Y+D DGI++ A+
Sbjct: 138 GVVFTPGDIAYSDDDGIVVVTAD 160
>gi|301054810|ref|YP_003793021.1| ribonuclease A activity regulator [Bacillus cereus biovar anthracis
str. CI]
gi|300376979|gb|ADK05883.1| Regulator of ribonuclease A activity [Bacillus cereus biovar
anthracis str. CI]
Length = 159
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQPFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG+++S L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYVDEDGVIMSEKSL 157
>gi|229134166|ref|ZP_04262984.1| Regulator of ribonuclease activity A [Bacillus cereus BDRD-ST196]
gi|228649274|gb|EEL05291.1| Regulator of ribonuclease activity A [Bacillus cereus BDRD-ST196]
Length = 161
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKKQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DGI++S L
Sbjct: 119 VKEGKGERNISLQFGEVEWKPNEYVYVDEDGIIVSDKSL 157
>gi|119505098|ref|ZP_01627174.1| ribonuclease activity regulator protein RraA [marine gamma
proteobacterium HTCC2080]
gi|119459080|gb|EAW40179.1| ribonuclease activity regulator protein RraA [marine gamma
proteobacterium HTCC2080]
Length = 162
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TT ++ D+ P E L F +G + F+GP T+ EDN + E + G G
Sbjct: 7 TTPDLSDSYP------ETEVLPYQFLHFGTVECFAGPAATISCQEDNSCVAEAVSSPGGG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVL+VDG SLR ++LG N +A +N WAGIV+ G IRDV+ I+ +GV AL P+K
Sbjct: 61 RVLIVDGQQSLRRSLLGDNLAKKAIHNQWAGIVILGAIRDVEIIDTLSLGVLALGVVPVK 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+K+G+G++ V +++ G + G WLYAD +G+L++
Sbjct: 121 TDKRGLGQRDVDLSLDGVSVLPGYWLYADRNGVLVA 156
>gi|423616463|ref|ZP_17592297.1| RraA family protein [Bacillus cereus VD115]
gi|401258279|gb|EJR64465.1| RraA family protein [Bacillus cereus VD115]
Length = 159
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGEASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G + E++YAD DG++IS L
Sbjct: 119 VKEGKGERNISLYFGQVDWNPNEYVYADEDGVIISEKSL 157
>gi|421263915|ref|ZP_15714927.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. multocida str. P52VAC]
gi|401688926|gb|EJS84457.1| ribonuclease activity regulator protein RraA [Pasteurella multocida
subsp. multocida str. P52VAC]
Length = 148
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 87/139 (62%)
Query: 28 IFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQ 87
IF +G F G + T+K FE+N LI + LEE G GRVL++DGGG++R A++
Sbjct: 4 IFSSFGGVNRFYGKVTTVKCFENNGLITDILEENGEGRVLLIDGGGAVRRALVDAELAQL 63
Query: 88 AQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDG 147
A +NGW GI+V G +R + ++ DIG+ ALA P+ A+K+ IGE VP+ GG
Sbjct: 64 AVDNGWEGIIVYGAVRQIQQLEEMDIGIHALAPIPVGADKQNIGEIDVPVNFGGVTFFPE 123
Query: 148 EWLYADTDGILISRAELSV 166
+++YAD GI++S+ L +
Sbjct: 124 DYVYADLTGIILSQEPLEL 142
>gi|444307504|ref|ZP_21143235.1| ribonuclease activity regulator protein RraA [Arthrobacter sp.
SJCon]
gi|443480163|gb|ELT43127.1| ribonuclease activity regulator protein RraA [Arthrobacter sp.
SJCon]
Length = 164
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 87/141 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL ++ FQ G R FSGPI T++ F+DN L++ L GNG VLVVDGGGSL A++
Sbjct: 24 ELASVALQFQSLGGRSHFSGPIRTIRCFQDNALVKSTLATPGNGSVLVVDGGGSLGTALM 83
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V++G IRD + I ++GV+AL S+P K+ K G GE V + +
Sbjct: 84 GDMIAESAVANGWAGVVIHGAIRDREAIARLELGVKALGSNPRKSAKAGAGEVDVDVVVD 143
Query: 141 GTRISDGEWLYADTDGILISR 161
G G ++ D DGIL+ R
Sbjct: 144 GVTFRPGAMVWCDPDGILVER 164
>gi|37678832|ref|NP_933441.1| ribonuclease activity regulator protein RraA [Vibrio vulnificus
YJ016]
gi|37197573|dbj|BAC93412.1| demethylmenaquinone methyltransferase [Vibrio vulnificus YJ016]
gi|218218156|gb|ACK76428.1| RraAV2 [Vibrio vulnificus MO6-24/O]
Length = 170
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + ++ L Q +G++ F G IVT++ + DN +R+ L E G G+
Sbjct: 15 TPDICDQH-----EDKVTLLNLPLQNFGQKAAFFGEIVTVRCYHDNSKVRDVLSENGKGK 69
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS + A+LG + A N W G++V G +RDV +++ ++G++AL + P K
Sbjct: 70 VLVVDGHGSCQKALLGDQLAILAIENDWEGVIVFGAVRDVAQMSQMELGIKALGTSPFKT 129
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G GE +V +T+ + +++YAD +GILIS+ L
Sbjct: 130 EKRGAGEVNVTLTMHNQMVQPKDYIYADWNGILISKELLQ 169
>gi|90580599|ref|ZP_01236404.1| ribonuclease activity regulator protein RraA [Photobacterium
angustum S14]
gi|90438257|gb|EAS63443.1| ribonuclease activity regulator protein RraA [Photobacterium
angustum S14]
Length = 165
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 86/135 (63%)
Query: 32 YGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNN 91
YG R +F G VTL+ FEDN L+R+ L + G G+VL +DG GS R A+LG + A N
Sbjct: 26 YGGRNIFYGQCVTLRCFEDNSLVRDILSQDGAGKVLFIDGHGSCRRALLGDQLALLAIKN 85
Query: 92 GWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLY 151
W GI+VNG +RD+ + ++GV+AL P+K K+ +GE +V + I + G+++Y
Sbjct: 86 NWQGIIVNGAVRDIATLATLNLGVKALGGCPIKTVKRQMGELNVTLNISEKLVYPGDYIY 145
Query: 152 ADTDGILISRAELSV 166
AD +GI++S+ L +
Sbjct: 146 ADLNGIILSKQALDL 160
>gi|262404689|ref|ZP_06081244.1| ribonuclease E inhibitor RraA [Vibrio sp. RC586]
gi|262349721|gb|EEY98859.1| ribonuclease E inhibitor RraA [Vibrio sp. RC586]
Length = 162
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 6 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 60
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 61 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGACPFKT 120
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S +L V
Sbjct: 121 EKRGAGQINVTLTMQNQIVEPGDYLYADWNGILMSDTQLEV 161
>gi|229075296|ref|ZP_04208289.1| Regulator of ribonuclease activity A [Bacillus cereus Rock4-18]
gi|229097771|ref|ZP_04228726.1| Regulator of ribonuclease activity A [Bacillus cereus Rock3-29]
gi|229116782|ref|ZP_04246166.1| Regulator of ribonuclease activity A [Bacillus cereus Rock1-3]
gi|423378924|ref|ZP_17356208.1| RraA family protein [Bacillus cereus BAG1O-2]
gi|423441972|ref|ZP_17418878.1| RraA family protein [Bacillus cereus BAG4X2-1]
gi|423447802|ref|ZP_17424681.1| RraA family protein [Bacillus cereus BAG5O-1]
gi|423465040|ref|ZP_17441808.1| RraA family protein [Bacillus cereus BAG6O-1]
gi|423534386|ref|ZP_17510804.1| RraA family protein [Bacillus cereus HuB2-9]
gi|423540344|ref|ZP_17516735.1| RraA family protein [Bacillus cereus HuB4-10]
gi|423623634|ref|ZP_17599412.1| RraA family protein [Bacillus cereus VD148]
gi|228666614|gb|EEL22072.1| Regulator of ribonuclease activity A [Bacillus cereus Rock1-3]
gi|228685716|gb|EEL39639.1| Regulator of ribonuclease activity A [Bacillus cereus Rock3-29]
gi|228707847|gb|EEL60027.1| Regulator of ribonuclease activity A [Bacillus cereus Rock4-18]
gi|401130213|gb|EJQ37882.1| RraA family protein [Bacillus cereus BAG5O-1]
gi|401173879|gb|EJQ81091.1| RraA family protein [Bacillus cereus HuB4-10]
gi|401258002|gb|EJR64195.1| RraA family protein [Bacillus cereus VD148]
gi|401633873|gb|EJS51643.1| RraA family protein [Bacillus cereus BAG1O-2]
gi|402415928|gb|EJV48247.1| RraA family protein [Bacillus cereus BAG4X2-1]
gi|402419477|gb|EJV51757.1| RraA family protein [Bacillus cereus BAG6O-1]
gi|402463356|gb|EJV95058.1| RraA family protein [Bacillus cereus HuB2-9]
Length = 159
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G +++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNDYVYVDEDGVIISEKSL 157
>gi|254507513|ref|ZP_05119647.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus 16]
gi|219549583|gb|EED26574.1| ribonuclease activity regulator protein RraA [Vibrio
parahaemolyticus 16]
Length = 160
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + + EL P+ +G + F G IVT++ + DN ++R+ L + G G+
Sbjct: 5 TPDICDKHEDKVTLVEL----PLHN-FGAKSAFWGEIVTVRCYHDNSIVRDTLSQDGRGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL VDG GS + A+LG + A +N W G+++NG IRD I IGV+AL + P K
Sbjct: 60 VLFVDGHGSCQKALLGDQLAILAIDNHWEGVIINGAIRDAGAIAEMQIGVKALGTCPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+G+G+ +V +TI I G+++YAD +G+L+S +L
Sbjct: 120 EKRGVGDVNVTLTIHNQMIQPGDFVYADWNGVLMSSEKLE 159
>gi|325965139|ref|YP_004243045.1| RraA family protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323471226|gb|ADX74911.1| RraA family protein [Arthrobacter phenanthrenivorans Sphe3]
Length = 164
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
A V TA++ D + EL ++ FQ G R FSG T++ F+DN L++ L
Sbjct: 10 AAVNTADLYDERGE-----ELASVSLQFQSLGGRSHFSGRARTIRCFQDNALVKSTLATP 64
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
GNG VLVVDGGGSL A++G A NGWAG+V+NG IRD + I D+GV+AL S+
Sbjct: 65 GNGCVLVVDGGGSLGTALMGDMIAESAVANGWAGVVINGAIRDREAIAALDLGVKALGSN 124
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
P K+ + G GE V + I G I G ++ D DGIL+ R
Sbjct: 125 PRKSARDGAGEVDVDVVIDGVTIRTGAMIWCDPDGILVER 164
>gi|406595151|ref|YP_006746281.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
ATCC 27126]
gi|407682073|ref|YP_006797247.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'English Channel 673']
gi|407685957|ref|YP_006801130.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'Balearic Sea AD45']
gi|406372472|gb|AFS35727.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
ATCC 27126]
gi|407243684|gb|AFT72870.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'English Channel 673']
gi|407289337|gb|AFT93649.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'Balearic Sea AD45']
Length = 161
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + + + PIF +G R F G I T+K FED LI L + G G+
Sbjct: 5 TSELCD-----LFADSVDVVDPIFASFGGRYSFGGEITTIKCFEDRGLIDRVLAQPGAGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A+ + A +N W G+V+ G +R+VD + DIGV A+A+ P+ A
Sbjct: 60 VLLIDGGGSSRRALFDASSAQVAIDNDWEGVVIYGSVREVDSLAELDIGVLAVAAIPVNA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE VP+ GG + LYAD+ G+++S L +
Sbjct: 120 ECESIGEVDVPVNFGGVTFLPEDHLYADSTGVILSPEPLDL 160
>gi|196037959|ref|ZP_03105269.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196031229|gb|EDX69826.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 159
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD +L+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENKLQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISEKSL 157
>gi|359423217|ref|ZP_09214359.1| regulator of ribonuclease activity A [Gordonia amarae NBRC 15530]
gi|358241511|dbj|GAB03941.1| regulator of ribonuclease activity A [Gordonia amarae NBRC 15530]
Length = 163
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 5/163 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 4 LTFTATADLVDE-----IGADVRSCDTQFTQYGGVREFVGRVSTVRCFQDNALLKSVLSE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+ +G IRD I G +IGV+AL +
Sbjct: 59 PNPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIAHGAIRDAKTIGGMEIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAE 163
+P K+ K G GE+ VP+TIGG + G+ Y+D DGI++ E
Sbjct: 119 NPRKSTKTGAGERDVPLTIGGITFNPGDIAYSDDDGIVVVTPE 161
>gi|49478174|ref|YP_037432.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49329730|gb|AAT60376.1| regulator of ribonuclease acivity [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 159
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD +L+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKDLQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISEKSL 157
>gi|449143704|ref|ZP_21774527.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio mimicus CAIM 602]
gi|449080702|gb|EMB51613.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Vibrio mimicus CAIM 602]
Length = 161
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 5 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G++V G +RDV ++ D+G++AL + P K
Sbjct: 60 VLVVDGHGSCHKALMGDQLAILAIENDWEGVIVYGAVRDVVAMSEMDLGIKALGACPFKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 120 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETPLEV 160
>gi|325003086|ref|ZP_08124198.1| ribonuclease activity regulator protein RraA [Pseudonocardia sp.
P1]
Length = 161
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 96/154 (62%), Gaps = 5/154 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++ D + S + + F+ YG R F G VTL V +DN+L++E + E G G+
Sbjct: 8 TADLADEYGDSLYSSDTQ-----FRQYGGRAAFGGAAVTLLVHDDNLLVKEAVSEPGAGK 62
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS A+LG N +A NGW GI+V+G +RDV + G DIG++A+ S+P ++
Sbjct: 63 VLVIDGGGSCHSALLGDNMAAKAAANGWEGIIVHGAVRDVTALRGLDIGIKAVGSNPRRS 122
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K G G + V I +GG I+ G + +D DGI++
Sbjct: 123 GKTGSGRRDVTIALGGATITPGAHIVSDDDGIVV 156
>gi|398889935|ref|ZP_10643677.1| RraA family protein [Pseudomonas sp. GM55]
gi|398188854|gb|EJM76145.1| RraA family protein [Pseudomonas sp. GM55]
Length = 160
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T+++CD P + R L P+F+ +G + F G TLK FEDN I+E G
Sbjct: 3 VKTSDLCDQYPDTV-----RVLAPVFRDFGGKNDFEGRAFTLKCFEDNSRIKEISSLPGQ 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS R A+ G NGWAG+++ G IRD + I ++AL + P
Sbjct: 58 GRVLVVDGGGSDRYALFGDVIAEDLVRNGWAGVLIYGYIRDKAALRDMPIAIKALGTSPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K K+ G+ + + G ISDG+ LY D DG+++
Sbjct: 118 KTVKRNEGKIGIAVEFAGHTISDGDQLYGDDDGVVL 153
>gi|258620903|ref|ZP_05715937.1| ribonuclease activity regulator protein RraA [Vibrio mimicus VM573]
gi|258586291|gb|EEW11006.1| ribonuclease activity regulator protein RraA [Vibrio mimicus VM573]
Length = 146
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 87/138 (63%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
Q +G+R F G IVT++ + DN +R+ L + G G+VLVVDG GS A++G + A
Sbjct: 8 LQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGKVLVVDGHGSCHKALMGDQLAILA 67
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
N W G++V G +RDV ++ D+G++AL + P K K+G G+ +V +T+ + G+
Sbjct: 68 IENDWEGVIVYGAVRDVVAMSEMDLGIKALGTCPFKTEKRGAGQINVTLTMQNQIVEPGD 127
Query: 149 WLYADTDGILISRAELSV 166
+LYAD +GIL+S +L V
Sbjct: 128 YLYADWNGILMSETQLEV 145
>gi|407698425|ref|YP_006823212.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'Black Sea 11']
gi|407247572|gb|AFT76757.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'Black Sea 11']
Length = 161
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + + + PIF +G R F G I T+K FED LI L + G G+
Sbjct: 5 TSELCD-----LFADSVDVVDPIFASFGGRYSFGGEITTIKCFEDRGLIDRVLAQPGAGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A+ + A +N W G+V+ G +R+VD + DIGV A+A+ P+ A
Sbjct: 60 VLLIDGGGSSRRALFDASSAQIAIDNDWEGVVIYGSVREVDSLAELDIGVLAVAAIPVNA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE VP+ GG + LYAD+ G+++S L +
Sbjct: 120 ECESIGEVDVPVNFGGVTFLPEDHLYADSTGVILSPEPLDL 160
>gi|453363171|dbj|GAC80975.1| ribonuclease regulator RraA [Gordonia malaquae NBRC 108250]
Length = 162
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 4 LNFTPTADLVDE-----IGADVRSCDTQFTQYGGNREFVGTVTTVRCFQDNALLKSILSE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+ NG IRD I G IGV+AL +
Sbjct: 59 PNEGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIANGAIRDAKTIGGMAIGVKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ VP+ +GG + G+ Y+D DGI++
Sbjct: 119 NPRKSTKTGAGERDVPVELGGVTFTPGDIAYSDDDGIVL 157
>gi|410611536|ref|ZP_11322634.1| regulator of ribonuclease activity A protein 2 [Glaciecola
psychrophila 170]
gi|410168954|dbj|GAC36523.1| regulator of ribonuclease activity A protein 2 [Glaciecola
psychrophila 170]
Length = 161
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD + + + ++P+F +G R + G I T+K FED L+ + LE+ G G+
Sbjct: 5 TSTLCD-----VFADSVDVVEPMFVSFGGRVSYGGEITTIKCFEDKGLVLKTLEQPGLGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGS+R A++ + A +NGW GIV G +R+VDE+ +IG+ A+AS P+ A
Sbjct: 60 ILLIDGGGSMRRALIDSSAARLAFDNGWEGIVCYGSVREVDELEEINIGIHAIASIPVSA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ + GE V + GG + LYAD+ GI++S L +
Sbjct: 120 DDQETGEMDVAVNFGGVTFLPNDHLYADSTGIILSPEPLDL 160
>gi|315125395|ref|YP_004067398.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas sp.
SM9913]
gi|359439312|ref|ZP_09229288.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20311]
gi|315013908|gb|ADT67246.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas sp.
SM9913]
gi|358025982|dbj|GAA65537.1| regulator of ribonuclease activity A [Pseudoalteromonas sp.
BSi20311]
Length = 165
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 5/156 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+T+++CD ++ L+P+F +G R F G I T+K FE+N LIR+ L + G
Sbjct: 4 STSDLCDHFADVV-----DVLEPMFINFGGRHSFGGRIKTVKCFENNELIRQLLSQDGTD 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
++L++DGGGS R A++ A N W GI+V G +R VDE+ D+G++A+ S P+
Sbjct: 59 QILLIDGGGSTRRALIDIELAELALENNWQGIIVYGALRHVDELEELDLGIQAIGSIPVA 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
A+ +G GE + + G D +++YAD+ GI++S
Sbjct: 119 ADSEGAGESGIGVNFAGVSFFDDDFVYADSTGIVLS 154
>gi|418461230|ref|ZP_13032308.1| RraA family protein [Saccharomonospora azurea SZMC 14600]
gi|359738717|gb|EHK87599.1| RraA family protein [Saccharomonospora azurea SZMC 14600]
Length = 164
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 84/139 (60%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
LR F+ +G + FSG + T+ EDN L+RE L G+G VLVVDGGGSL A+
Sbjct: 22 RLRVCDTQFRQFGGHRAFSGAVRTVSCHEDNGLLRELLRTPGDGAVLVVDGGGSLHTALT 81
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG +RD + +G++AL ++P K++K G G VP+ G
Sbjct: 82 GDLIAASAVENGWAGLVINGAVRDSAALAELPLGIKALGTNPRKSSKDGRGAVDVPVGFG 141
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ L+AD DG+++
Sbjct: 142 GVTFTPGDVLHADDDGVVL 160
>gi|398958507|ref|ZP_10677572.1| RraA family protein [Pseudomonas sp. GM33]
gi|398146298|gb|EJM35053.1| RraA family protein [Pseudomonas sp. GM33]
Length = 160
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T+++CD P I R L PIFQ +G + F G TLK FEDN I+E G+
Sbjct: 3 VKTSDLCDQYPDSI-----RVLSPIFQDFGGKNDFEGRAFTLKCFEDNSRIKEISSLPGH 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS R A+ G NGW G+++ G IRD + I ++AL + P
Sbjct: 58 GRVLVVDGGGSDRYALFGDVIAEDLVKNGWVGVLIYGYIRDKAALRDMPIAIKALGTSPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K K+ G+ + + G I+DG+ L+ D DG+++
Sbjct: 118 KTVKRNEGQIGISVEFAGHTIADGDQLFGDDDGVVL 153
>gi|441523093|ref|ZP_21004727.1| ribonuclease regulator RraA [Gordonia sihwensis NBRC 108236]
gi|441457312|dbj|GAC62688.1| ribonuclease regulator RraA [Gordonia sihwensis NBRC 108236]
Length = 164
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ TA++ D + ++R+ F YG + F G + T++ F+DN L++ L E
Sbjct: 6 LNFTPTADLVDE-----IGADVRSCDTQFTQYGGNREFVGTVTTVRCFQDNALLKSILSE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGW GI+ NG IRD I G IGV+AL +
Sbjct: 61 PNPGGVLVIDGDASVHTALVGDIIAELGRSNGWVGIIANGAIRDAKTIGGMAIGVKALGT 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ VP+ +GG + G+ +Y+D DGI++
Sbjct: 121 NPRKSTKTGAGERDVPVELGGVTFNPGDIVYSDDDGIVL 159
>gi|358444925|ref|ZP_09155541.1| putative ribonuclease activity regulator protein RraA
[Corynebacterium casei UCMA 3821]
gi|356609156|emb|CCE53761.1| putative ribonuclease activity regulator protein RraA
[Corynebacterium casei UCMA 3821]
Length = 155
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 91/141 (64%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L +L F+ G + F+GP T+KV EDN L++E +++ G GRVLVVDG + CA++
Sbjct: 15 KLDSLPFNFENLGLVEHFAGPAETVKVDEDNQLLKELMKQPGEGRVLVVDGDEKITCALM 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
GGN +++GWAG+V+ G IRD E+ ++GV A+ S+P ++ K+ G+ V +
Sbjct: 75 GGNMAKMFKDSGWAGLVIVGAIRDRAELAEIELGVLAMGSNPQRSKKERTGKVGVTLDFS 134
Query: 141 GTRISDGEWLYADTDGILISR 161
G ++ G +YAD+DG+LI R
Sbjct: 135 GVKVVPGAMVYADSDGVLIER 155
>gi|384246817|gb|EIE20306.1| regulator of ribonuclease activity [Coccomyxa subellipsoidea C-169]
Length = 132
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
F+ YG FSG +T++ E N ++RE L+E G GRVLVVDG S RCA+LG +
Sbjct: 3 FRDYGGMTRFSGKAITIQCLETNQVLRETLDEAGEGRVLVVDGQASKRCALLGDILGAKL 62
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
NG++GI++NGC+RD +++ +GV+AL + P+K K +G K P+T G I+ G+
Sbjct: 63 HRNGFSGIIINGCVRDTEDLGKLPVGVKALNTCPVKPGKAPVGTKGEPVTFAGITINTGD 122
Query: 149 WLYAD 153
W+YAD
Sbjct: 123 WVYAD 127
>gi|110834106|ref|YP_692965.1| ribonuclease activity regulator protein RraA [Alcanivorax
borkumensis SK2]
gi|123149508|sp|Q0VQ55.1|RRAAH_ALCBS RecName: Full=Putative regulator of ribonuclease activity
gi|110647217|emb|CAL16693.1| s-adenosylmethionine:2-demethylmenaquinonemethyl transferase
[Alcanivorax borkumensis SK2]
Length = 160
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 8/161 (4%)
Query: 6 TAEVCDANPQ--LIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
T ++CD N +V+G L L YG R F G IVT+K FEDN ++E L G
Sbjct: 5 TCDLCDDNADSVCVVTG-LNWLS-----YGGRDAFGGEIVTVKCFEDNSRVKEHLGTDGK 58
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G+VLVVDGGGSLR A++G A NGW G+++ G RDVD + DIGV L P+
Sbjct: 59 GKVLVVDGGGSLRNALIGDMIAENAVKNGWEGVIIYGACRDVDALAKLDIGVITLGCVPI 118
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ ++ G+ ++ IT GG GE++YAD +GI+ + L
Sbjct: 119 KSVRRDEGQLNIEITFGGVVFRPGEFVYADNNGIITAPKAL 159
>gi|113970502|ref|YP_734295.1| ribonuclease activity regulator protein RraA [Shewanella sp. MR-4]
gi|114047737|ref|YP_738287.1| ribonuclease activity regulator protein RraA [Shewanella sp. MR-7]
gi|113885186|gb|ABI39238.1| regulator of ribonuclease activity A [Shewanella sp. MR-4]
gi|113889179|gb|ABI43230.1| regulator of ribonuclease activity A [Shewanella sp. MR-7]
Length = 164
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
Query: 9 VCDANPQLI--VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRV 66
+ D P L +L L F+ +G +++F G +VT+K FEDN ++E L + G+G+V
Sbjct: 1 MLDLLPDLFDHYPSKLTLLPLDFRSFGGKRLFWGEVVTVKCFEDNSKVKEVLAQPGHGKV 60
Query: 67 LVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKAN 126
LVVDGG S R A+LG A +NGW G+V+NG +RD ++ ++GV AL + P+K
Sbjct: 61 LVVDGGSSSRRALLGDLIAQSALDNGWQGVVINGYVRDAARLSTFNLGVYALGAMPIKTE 120
Query: 127 KKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G+ VPI G I G LYAD +GI +S L+
Sbjct: 121 KLNQGQIDVPIEFGTVVIKPGMMLYADENGIAVSEESLN 159
>gi|37088871|sp|Q8FQY0.2|RRAAH_COREF RecName: Full=Putative regulator of ribonuclease activity
Length = 170
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
+ TA++ D I+ ++R+ F+ G R F G I T+K F+DN L++ L E
Sbjct: 7 TFIPTADLVD-----IIGDDVRSCDTQFRNLGGRTDFHGTITTVKCFQDNALLKSILGED 61
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G VLV+DG SL A++G +++GW+G+VVNG IRD I + G +AL ++
Sbjct: 62 NPGGVLVIDGDASLHTALVGDIIAGLGRDHGWSGVVVNGAIRDSAVIGEMEFGCKALGTN 121
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
P K++K G GE+ V ++ GG + G +LYAD+DGI+++
Sbjct: 122 PRKSSKTGAGERDVVVSFGGVDFTPGHYLYADSDGIVVTE 161
>gi|410859858|ref|YP_006975092.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
AltDE1]
gi|410817120|gb|AFV83737.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
AltDE1]
Length = 161
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + + + PIF +G R F G I T+K FED LI L + G G+
Sbjct: 5 TSELCD-----LFADSVDVVDPIFASFGGRYSFGGEITTVKCFEDRGLIDRVLAQPGAGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A+ + A +N W G+V+ G +R+VD + DIGV A+A+ P+ A
Sbjct: 60 VLLIDGGGSSRRALFDASSAQVAIDNDWEGVVIYGSVREVDSLAELDIGVLAVAAIPVNA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE +P+ GG + LYAD+ GI++S L +
Sbjct: 120 ECESIGEVDLPVNFGGVTFLPEDHLYADSTGIILSPEPLDL 160
>gi|242241194|ref|YP_002989375.1| ribonuclease activity regulator protein RraA [Dickeya dadantii
Ech703]
gi|242133251|gb|ACS87553.1| regulator of ribonuclease activity A [Dickeya dadantii Ech703]
Length = 161
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ LEE G G+
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRSSFGGKITTVKCFEDNGLLFNVLEENGWGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGS+R A++ A N W GIV+ G +R VD++ DIG++A+A+ P A
Sbjct: 60 VLLVDGGGSVRRALIDAELARLATQNEWEGIVIYGAVRQVDDLAELDIGIQAMAATPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+G G+ V + GG G+ LYAD+ GI++S L +
Sbjct: 120 ASEGTGDTDVRVNFGGVTFFSGDHLYADSTGIILSEDPLDL 160
>gi|375139070|ref|YP_004999719.1| RraA family protein [Mycobacterium rhodesiae NBB3]
gi|359819691|gb|AEV72504.1| RraA family protein [Mycobacterium rhodesiae NBB3]
Length = 160
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 85/139 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ + +G R F+GPI T+K FEDN L++ L E GNG VLV+DGGGSL A++
Sbjct: 18 DVRSCDLQLRQFGGRSQFAGPITTVKCFEDNALLKSVLSEPGNGGVLVIDGGGSLHAALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G +NGW G+++NG +RD + DIGV+AL ++P K+ K G G + + G
Sbjct: 78 GDVIAGLGVDNGWVGLIINGAVRDSSTLRTLDIGVKALGTNPRKSTKSGEGLRDAAVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G G +++D DGI++
Sbjct: 138 GVVFVPGHIVHSDDDGIVV 156
>gi|385674679|ref|ZP_10048607.1| RraA family protein [Amycolatopsis sp. ATCC 39116]
Length = 156
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 93/155 (60%), Gaps = 5/155 (3%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
+TA++ D + +LR F+ +G ++VFSG + T+ ++DN L+++ L G G
Sbjct: 4 STADLVDEHGD-----KLRVCDTQFRQFGGQRVFSGRVRTVSCYQDNGLVKQVLATPGEG 58
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
VLVVDG GSL A+ G A NGWAG+V+NG +RD + G IG++AL ++P K
Sbjct: 59 AVLVVDGRGSLHTALTGDLIAGSAVENGWAGLVINGAVRDSAVLAGLPIGIKALGTNPRK 118
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
++K G G VP+ GG G+ LYAD DGI++
Sbjct: 119 SSKAGNGAVDVPVGFGGVTFHPGDMLYADDDGIVL 153
>gi|423605043|ref|ZP_17580936.1| RraA family protein [Bacillus cereus VD102]
gi|401244191|gb|EJR50555.1| RraA family protein [Bacillus cereus VD102]
Length = 159
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+V G +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVYGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYVDEDGVIISEKSL 157
>gi|71277832|ref|YP_267296.1| ribonuclease activity regulator protein RraA [Colwellia
psychrerythraea 34H]
gi|71143572|gb|AAZ24045.1| protein of unknown function [Colwellia psychrerythraea 34H]
Length = 163
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 85/146 (58%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
+L F YG+ +F G IVT+ FEDN ++E L G+G+VLVVDG GS+ A+L
Sbjct: 15 QLSLANQAFTDYGKNTIFYGEIVTVSCFEDNSKVKEILATDGSGKVLVVDGKGSMNRALL 74
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A N W +V+NGCIRD I +I V+A+ +P+K K G+G+ ++ +
Sbjct: 75 GDMIAENAVKNNWQAVVINGCIRDAGTIRTLEIAVKAIGCNPIKTEKLGVGDTNIVVNFA 134
Query: 141 GTRISDGEWLYADTDGILISRAELSV 166
G ++Y D +G+ +S+++LSV
Sbjct: 135 NVEFIPGWYVYGDENGLAVSKSKLSV 160
>gi|433650792|ref|YP_007295794.1| RraA family protein [Mycobacterium smegmatis JS623]
gi|433300569|gb|AGB26389.1| RraA family protein [Mycobacterium smegmatis JS623]
Length = 160
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 87/139 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ F+ YG R F+G I T++ F+DN L++ L E GNG VLV+DG GSL A++
Sbjct: 18 DVRSCDLQFKQYGGRVQFAGSITTVRCFQDNALLKSVLSEPGNGGVLVIDGDGSLHSALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G +NGW G+++NG +RD + +IG++AL ++P K++K G G++ V + G
Sbjct: 78 GDLIAGLGVDNGWVGLIINGAVRDAATLRTLEIGIKALGTNPRKSSKTGDGQRDVAVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G GE Y+D DGI++
Sbjct: 138 GVVFKPGEIAYSDDDGIVV 156
>gi|25027543|ref|NP_737597.1| ribonuclease activity regulator protein RraA [Corynebacterium
efficiens YS-314]
gi|259507049|ref|ZP_05749949.1| regulator of ribonuclease activity A [Corynebacterium efficiens
YS-314]
gi|23492825|dbj|BAC17797.1| putative S-adenosylmethionine:2-demethylmenaquinone
methyltransferase [Corynebacterium efficiens YS-314]
gi|259165327|gb|EEW49881.1| regulator of ribonuclease activity A [Corynebacterium efficiens
YS-314]
Length = 193
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
+ TA++ D I+ ++R+ F+ G R F G I T+K F+DN L++ L E
Sbjct: 30 TFIPTADLVD-----IIGDDVRSCDTQFRNLGGRTDFHGTITTVKCFQDNALLKSILGED 84
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
G VLV+DG SL A++G +++GW+G+VVNG IRD I + G +AL ++
Sbjct: 85 NPGGVLVIDGDASLHTALVGDIIAGLGRDHGWSGVVVNGAIRDSAVIGEMEFGCKALGTN 144
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISR 161
P K++K G GE+ V ++ GG + G +LYAD+DGI+++
Sbjct: 145 PRKSSKTGAGERDVVVSFGGVDFTPGHYLYADSDGIVVTE 184
>gi|47564444|ref|ZP_00235489.1| protein of unknown function, TIGR01935 [Bacillus cereus G9241]
gi|206974675|ref|ZP_03235591.1| protein of unknown function [Bacillus cereus H3081.97]
gi|222096778|ref|YP_002530835.1| ribonuclease activity regulator protein rraa [Bacillus cereus Q1]
gi|228986395|ref|ZP_04146531.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|47558596|gb|EAL16919.1| protein of unknown function, TIGR01935 [Bacillus cereus G9241]
gi|206747318|gb|EDZ58709.1| protein of unknown function [Bacillus cereus H3081.97]
gi|221240836|gb|ACM13546.1| s-adenosylmethionine:2-demethylmenaquinone methyltransferase,
putative [Bacillus cereus Q1]
gi|228773216|gb|EEM21646.1| Regulator of ribonuclease activity A [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 159
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+V G +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVYGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYVDEDGVIISEKSL 157
>gi|109900368|ref|YP_663623.1| ribonuclease activity regulator protein RraA [Pseudoalteromonas
atlantica T6c]
gi|332304602|ref|YP_004432453.1| ribonuclease activity A regulator [Glaciecola sp. 4H-3-7+YE-5]
gi|410625933|ref|ZP_11336703.1| regulator of ribonuclease activity A protein 2 [Glaciecola
mesophila KMM 241]
gi|410640925|ref|ZP_11351451.1| regulator of ribonuclease activity A protein 2 [Glaciecola
chathamensis S18K6]
gi|410645367|ref|ZP_11355833.1| regulator of ribonuclease activity A protein 2 [Glaciecola
agarilytica NO2]
gi|123360179|sp|Q15NG9.1|RRAA_PSEA6 RecName: Full=Regulator of ribonuclease activity A
gi|109702649|gb|ABG42569.1| regulator of ribonuclease activity A [Pseudoalteromonas atlantica
T6c]
gi|332171931|gb|AEE21185.1| regulator of ribonuclease activity A [Glaciecola sp. 4H-3-7+YE-5]
gi|410135139|dbj|GAC04232.1| regulator of ribonuclease activity A protein 2 [Glaciecola
agarilytica NO2]
gi|410139490|dbj|GAC09638.1| regulator of ribonuclease activity A protein 2 [Glaciecola
chathamensis S18K6]
gi|410154553|dbj|GAC23472.1| regulator of ribonuclease activity A protein 2 [Glaciecola
mesophila KMM 241]
Length = 161
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD + + + ++P+F +G R F G I T+K FED +I + LE+ G G+
Sbjct: 5 TSALCD-----LFADSVDVVEPMFVSFGGRASFGGEITTIKCFEDKGVILKALEKPGLGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS+R A++ A +NGW GI+ G +R+VD++ ++GV A+AS P+ A
Sbjct: 60 VLLIDGGGSMRRALIDSAAAQIALDNGWEGIICYGSVREVDDLEEINVGVHAIASIPVSA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +G+GE V + GG + +YAD GI++S L V
Sbjct: 120 DDQGVGEVDVAVNFGGVTFLPEDHVYADRTGIILSPEPLDV 160
>gi|384181149|ref|YP_005566911.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324327233|gb|ADY22493.1| ribonuclease activity regulator protein RraA [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 159
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFYGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+V G +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVYGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPNEYVYVDEDGVIISEKSL 157
>gi|392418794|ref|YP_006455399.1| RraA family protein [Mycobacterium chubuense NBB4]
gi|390618570|gb|AFM19720.1| RraA family protein [Mycobacterium chubuense NBB4]
Length = 165
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 88/143 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ + YG R F+GPI T++ FEDN L++ L E G+G VLV+DG GS+ A++
Sbjct: 18 DVRSCDLQMRQYGGRAEFAGPITTVRCFEDNALLKSVLSEPGDGGVLVIDGDGSVHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G ++NGW+G++VNG +RD + DIG++AL ++P K+ K G G + + G
Sbjct: 78 GDLIAELGRSNGWSGLIVNGAVRDSATLRTLDIGIKALGTNPRKSTKTGDGVRDAAVEFG 137
Query: 141 GTRISDGEWLYADTDGILISRAE 163
G GE Y+D DGI++ + +
Sbjct: 138 GVVFVPGEIAYSDDDGIVVVKPD 160
>gi|389864884|ref|YP_006367125.1| Regulator of ribonuclease activity A, inhibitor of RNAse E
[Modestobacter marinus]
gi|388487088|emb|CCH88644.1| Regulator of ribonuclease activity A, inhibitor of RNAse E
[Modestobacter marinus]
Length = 158
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 88/159 (55%), Gaps = 6/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M TA++CD P + + P+ +G FSG I T+ V EDN L+R LE
Sbjct: 1 MPPQPTADLCDERP------DAQVCDPVLSAFGGTAAFSGRIATVTVTEDNALVRAVLER 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G GRVLVVDGGG+ RCA GG A +GWAG+VVNG +RDV E+ +GVRALA
Sbjct: 55 PGEGRVLVVDGGGNERCAFFGGGLAAVAAGSGWAGVVVNGAVRDVAEMADQPVGVRALAV 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P + G + G +GEWL AD DG+++
Sbjct: 115 YPRRGAGGDRGREGGTCRFAGVTFREGEWLVADADGVVV 153
>gi|229197423|ref|ZP_04324150.1| Regulator of ribonuclease activity A [Bacillus cereus m1293]
gi|423575100|ref|ZP_17551219.1| RraA family protein [Bacillus cereus MSX-D12]
gi|228586047|gb|EEK44138.1| Regulator of ribonuclease activity A [Bacillus cereus m1293]
gi|401210172|gb|EJR16925.1| RraA family protein [Bacillus cereus MSX-D12]
Length = 159
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FENELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG S CA+LG N A+ AGI+V G +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGGASTNCALLGDNLAAIAEERKLAGIIVYGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G E++Y D DG++IS L
Sbjct: 119 VKEGKGERNISLQFGQVEWKPDEYVYVDEDGVIISEKSL 157
>gi|91793380|ref|YP_563031.1| ribonuclease activity regulator protein RraA [Shewanella
denitrificans OS217]
gi|91715382|gb|ABE55308.1| Protein of unknown function 1935 [Shewanella denitrificans OS217]
Length = 177
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 2 ALVTTAEVCDANPQLIVS--GELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLE 59
+++ EV D P L S +L+ + + YG R +F+G +VT+ FEDN ++ L
Sbjct: 12 SMIFGPEVDDLLPDLFDSYADKLQLVNETWCNYGGRTIFAGEVVTVSCFEDNSKVKAQLA 71
Query: 60 EKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALA 119
G G+VLVV G GS A+LG A +NGW GIV+ GCIRD I IGV+AL
Sbjct: 72 LPGVGKVLVVHGQGSFAKALLGDMIAKSALDNGWEGIVIYGCIRDAGAIAKMPIGVKALG 131
Query: 120 SHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
P+K K+ +GE +V + IG I G LYAD +GI IS + LS
Sbjct: 132 VTPIKTQKRDLGELNVTLEIGQVSIKPGMMLYADLNGIAISESVLS 177
>gi|384425314|ref|YP_005634672.1| Ribonuclease E inhibitor RraA [Vibrio cholerae LMA3984-4]
gi|327484867|gb|AEA79274.1| Ribonuclease E inhibitor RraA [Vibrio cholerae LMA3984-4]
Length = 162
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 6 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 60
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P +
Sbjct: 61 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFIS 120
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 121 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 161
>gi|258623858|ref|ZP_05718812.1| ribonuclease activity regulator protein RraA [Vibrio mimicus VM603]
gi|258583847|gb|EEW08642.1| ribonuclease activity regulator protein RraA [Vibrio mimicus VM603]
Length = 146
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
Q +G+R F G IVT++ + DN +R+ L + G G+VLVVDG GS A++G + A
Sbjct: 8 LQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGKVLVVDGHGSCHKALMGDQLAILA 67
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
N W G++V G +RDV ++ D+G++AL + P K K+G G+ +V +T+ + G+
Sbjct: 68 IENDWEGVIVYGAVRDVVAMSEMDLGIKALGACPFKTEKRGAGQVNVTLTMQNQIVEPGD 127
Query: 149 WLYADTDGILISRAELSV 166
+LYAD +GIL+S L V
Sbjct: 128 YLYADWNGILMSETPLEV 145
>gi|375100643|ref|ZP_09746906.1| RraA family protein [Saccharomonospora cyanea NA-134]
gi|374661375|gb|EHR61253.1| RraA family protein [Saccharomonospora cyanea NA-134]
Length = 162
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 83/139 (59%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
LR F+ +G + F G + T+ EDN L+RE L G G VLVVDGGGS+ A+
Sbjct: 20 RLRVCDTQFRQFGGHRAFCGRVRTVSCHEDNGLVRELLRTPGEGCVLVVDGGGSVHTALT 79
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG +RD + G IG++AL ++P K++K G G VP+ G
Sbjct: 80 GDLIAASAVENGWAGLVINGAVRDSATLAGLPIGIKALGTNPRKSSKAGRGAVDVPVGFG 139
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ L+AD DG+++
Sbjct: 140 GVTFTPGDVLHADDDGVVL 158
>gi|332139616|ref|YP_004425354.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'Deep ecotype']
gi|226703212|sp|B4S2E4.1|RRAA_ALTMD RecName: Full=Regulator of ribonuclease activity A
gi|327549638|gb|AEA96356.1| ribonuclease activity regulator protein RraA [Alteromonas macleodii
str. 'Deep ecotype']
Length = 161
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + + + PIF +G R F G I T+K FED LI L + G G+
Sbjct: 5 TSELCD-----LFADSVDVVDPIFASFGGRYSFGGEITTVKCFEDRGLIDRVLAQPGAGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A+ + A +N W G+V+ G +R+VD + DIGV A+A+ P+ A
Sbjct: 60 VLLIDGGGSSRRALFDASSAQVAIDNDWEGVVIYGSVREVDSLAELDIGVLAVAAIPVNA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +GE +P+ GG + LYAD+ G+++S L +
Sbjct: 120 ECESVGEVDLPVNFGGVTFLPEDHLYADSTGVILSPEPLDL 160
>gi|84497544|ref|ZP_00996366.1| ribonuclease activity regulator protein RraA [Janibacter sp.
HTCC2649]
gi|84382432|gb|EAP98314.1| ribonuclease activity regulator protein RraA [Janibacter sp.
HTCC2649]
Length = 156
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V+TA++ D + + S ++ + YG ++G I T++ DN L++ L E GN
Sbjct: 3 VSTADLWDERGETLQSCSVQ-----LRHYGGHTAYTGVISTVRCHRDNALVKAALGEPGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGSL A++G A GWAG+V++G +RDV + +G AL S+P
Sbjct: 58 GRVLVVDGGGSLESALMGDLIAASAVAQGWAGVVIHGAVRDVVALRDLPLGAVALGSNPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K+ K G+GE+ VP++ GG G+ ++ D DG++ S
Sbjct: 118 KSAKDGVGERDVPVSFGGVDFVPGQQVWVDEDGVVAS 154
>gi|220914510|ref|YP_002489819.1| ribonuclease activity regulator protein RraA [Arthrobacter
chlorophenolicus A6]
gi|219861388|gb|ACL41730.1| regulator of ribonuclease activity A [Arthrobacter chlorophenolicus
A6]
Length = 161
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 85/139 (61%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
EL ++ FQ G R FSG T++ F+DN L++ L GNG VLVVDGGGSL A++
Sbjct: 21 ELASVALQFQSLGGRTHFSGQARTIRCFQDNALVKSTLATPGNGSVLVVDGGGSLGTALM 80
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG IRD + I D+GV+AL S+P K+ K G GE V + I
Sbjct: 81 GDMIAESAVANGWAGVVINGAIRDREAIAKLDLGVKALGSNPRKSAKAGAGEVDVDVVID 140
Query: 141 GTRISDGEWLYADTDGILI 159
G I G ++ D DGIL+
Sbjct: 141 GVTIRTGARIWCDPDGILV 159
>gi|381161844|ref|ZP_09871074.1| RraA family protein [Saccharomonospora azurea NA-128]
gi|379253749|gb|EHY87675.1| RraA family protein [Saccharomonospora azurea NA-128]
Length = 177
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 84/139 (60%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
LR F+ +G + FSG + T+ EDN L+RE L G+G VLVV+GGGSL A+
Sbjct: 35 RLRVCDTQFRQFGGHRAFSGAVRTVSCHEDNGLLRELLRTPGDGAVLVVNGGGSLHTALT 94
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G A NGWAG+V+NG +RD + +G++AL ++P K++K G G VP+ G
Sbjct: 95 GDLIAASAVENGWAGLVINGAVRDSAALAELPLGIKALGTNPRKSSKDGRGAVDVPVGFG 154
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ L+AD DG+++
Sbjct: 155 GVTFTPGDVLHADDDGVVL 173
>gi|212639300|ref|YP_002315820.1| ribonuclease activity regulator protein RraA [Anoxybacillus
flavithermus WK1]
gi|212560780|gb|ACJ33835.1| Demethylmenaquinone methyltransferase [Anoxybacillus flavithermus
WK1]
Length = 160
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ TA++CD + +R FQ YG + F GPI T+ V EDNVL+RE LE
Sbjct: 3 MKTADLCDQYGE-----RVRVCSLSFQNYGGKTSFYGPITTVDVMEDNVLVREALETVPA 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G V+VVDG GS +CA++G A + AGI+V+GCIRD EI+ IGV AL + P
Sbjct: 58 GSVVVVDGKGSKQCALVGDRLAQIACDRQLAGIIVHGCIRDSKEISTMPIGVVALGTCPR 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ K+G G + + G G ++Y D DG+++S L
Sbjct: 118 KSKKEGKGARDTIVHFGDIEWKPGTYVYVDEDGVIVSDGPL 158
>gi|153803111|ref|ZP_01957697.1| protein of unknown function [Vibrio cholerae MZO-3]
gi|124121362|gb|EAY40105.1| protein of unknown function [Vibrio cholerae MZO-3]
Length = 162
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN + + L + G G+
Sbjct: 6 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVCDVLSQNGKGK 60
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A++G + A N W G+++ G +RDV ++ D+G++AL + P K
Sbjct: 61 VLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKT 120
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T+ + G++LYAD +GIL+S L V
Sbjct: 121 EKRGAGQVNVTLTMQNQIVEPGDYLYADWNGILMSETALDV 161
>gi|334564209|ref|ZP_08517200.1| ribonuclease activity regulator protein RraA [Corynebacterium bovis
DSM 20582]
Length = 181
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ TA++ D I+ ++R+ F +G F GP+ T++ +DN L++ L E
Sbjct: 20 FIPTADLVD-----IIGEDVRSCDTQFGDFGGVTDFCGPVTTVRCHQDNGLVKAILREPN 74
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G VLVVDGG S+ A++G NGWAG+++NG IRD + G G +AL ++P
Sbjct: 75 PGGVLVVDGGASVHTALMGDMIAESGVANGWAGVIINGAIRDSAAVAGMAFGCKALGTNP 134
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K++K G GE+ V +TIGG G YAD DGI+++ + ++
Sbjct: 135 RKSSKAGEGERDVTVTIGGVEFVPGHVAYADADGIVVTESPVT 177
>gi|348027774|ref|YP_004870460.1| ribonuclease activity regulator protein RraA [Glaciecola
nitratireducens FR1064]
gi|347945117|gb|AEP28467.1| ribonuclease activity regulator protein RraA [Glaciecola
nitratireducens FR1064]
Length = 161
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + + L PIF +G R + G + T+K FED L+ L +G+G+
Sbjct: 5 TSELCD-----LFADSVDVLDPIFTSFGGRYSYGGEVTTIKCFEDKGLVDRVLATRGDGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+L++DGGGS R A++ A NGW GIV G +R++D + CDIG+ AL++ P+ +
Sbjct: 60 ILLIDGGGSTRRALIDAYNAQMAAENGWEGIVCYGSVREIDILEDCDIGIHALSAIPVNS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ +G+ + + G + LYAD GI++S L +
Sbjct: 120 ESREVGDIDIAVNFAGVTFLPEDHLYADGTGIILSPEALDI 160
>gi|333894920|ref|YP_004468795.1| ribonuclease activity regulator protein RraA [Alteromonas sp. SN2]
gi|332994938|gb|AEF04993.1| ribonuclease activity regulator protein RraA [Alteromonas sp. SN2]
Length = 161
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + + + PIF +G R F G I T+K FED LI L + G G+
Sbjct: 5 TSELCD-----LFADSVDVVDPIFASFGGRYSFGGEITTIKCFEDRGLIDRVLAQPGAGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A+ A +N W GIV G +R+VD + DIGV A+A+ P+ A
Sbjct: 60 VLLIDGGGSTRRALFDAALAQVAIDNDWEGIVCYGSVREVDNLAEMDIGVLAVAAIPVNA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IG+ VP+ GG + LYAD+ G+++S L +
Sbjct: 120 ECESIGDVDVPVNFGGVTFLPEDHLYADSTGVILSPEPLDI 160
>gi|357588578|ref|ZP_09127244.1| ribonuclease activity regulator protein RraA [Corynebacterium
nuruki S6-4]
Length = 166
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + TA++ D I+ ++R+ F+ G R F GPI T++ F+DN L+++ L+E
Sbjct: 4 ITFIPTADLVD-----IIGADVRSCDTQFRDLGGRTDFCGPITTVRCFQDNGLVKKILQE 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLVVDG S+ A++G +GWAG+++NG IRD + G + G +AL +
Sbjct: 59 DNPGGVLVVDGDASVHTALMGDMIAEFGVQHGWAGVIINGAIRDSAAVGGMEFGAKALGT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+P K+ K G GE+ + GG G YAD DG++++ A +
Sbjct: 119 NPRKSAKDGAGERDAVVHFGGVDFVPGHIAYADADGVVVTEAPV 162
>gi|262274943|ref|ZP_06052754.1| ribonuclease E inhibitor RraA [Grimontia hollisae CIP 101886]
gi|262221506|gb|EEY72820.1| ribonuclease E inhibitor RraA [Grimontia hollisae CIP 101886]
Length = 164
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 89/133 (66%)
Query: 29 FQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQA 88
++ +G + VFSG + TL+ FEDN +R+ L + G GRVLVVDG G+L A+LG +A
Sbjct: 23 WRDFGGKTVFSGRVETLRCFEDNSKVRDILGKPGAGRVLVVDGHGNLNKALLGDLLAERA 82
Query: 89 QNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGE 148
NGW GIVV G +RD + ++GV+AL P+K K+G+G++ V + I G IS G+
Sbjct: 83 IENGWEGIVVYGAVRDAWALGKMNLGVKALGVCPIKTEKRGLGDEDVQLRIEGISISPGD 142
Query: 149 WLYADTDGILISR 161
+L+AD +G++IS+
Sbjct: 143 YLFADLNGVMISQ 155
>gi|120406624|ref|YP_956453.1| ribonuclease activity regulator protein RraA [Mycobacterium
vanbaalenii PYR-1]
gi|226703228|sp|A1TGZ7.1|RRAAH_MYCVP RecName: Full=Putative regulator of ribonuclease activity
gi|119959442|gb|ABM16447.1| regulator of ribonuclease activity A [Mycobacterium vanbaalenii
PYR-1]
Length = 160
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 87/139 (62%)
Query: 21 ELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAIL 80
++R+ + YG R F+GPI T++ F+DN L++ L E G+G VLV+DG GS+ A++
Sbjct: 18 DVRSCDLQLRQYGGRTDFAGPITTVRCFQDNALLKSVLSEPGDGGVLVIDGDGSVHTALV 77
Query: 81 GGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIG 140
G ++NGW+G+++NG +RD + DIG++AL ++P K+ K G G + + G
Sbjct: 78 GDVIAELGRSNGWSGLIINGAVRDASTLRTLDIGIKALGTNPRKSTKTGEGIRDEAVEFG 137
Query: 141 GTRISDGEWLYADTDGILI 159
G + G+ Y+D DGI++
Sbjct: 138 GVVFTPGDIAYSDDDGIVV 156
>gi|416267510|ref|ZP_11641891.1| Ribonuclease E inhibitor RraA [Shigella dysenteriae CDC 74-1112]
gi|320175372|gb|EFW50475.1| Ribonuclease E inhibitor RraA [Shigella dysenteriae CDC 74-1112]
Length = 160
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 5/139 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GR
Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A P+ A
Sbjct: 60 VLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAEIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRI 144
+GIGE V + GG +
Sbjct: 120 AGEGIGESDVRVNFGGVTL 138
>gi|410637749|ref|ZP_11348320.1| regulator of ribonuclease activity A protein 2 [Glaciecola
lipolytica E3]
gi|410142717|dbj|GAC15525.1| regulator of ribonuclease activity A protein 2 [Glaciecola
lipolytica E3]
Length = 161
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 92/161 (57%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD + + + + P+F YG R + G I T+K ED LI + L + G G+
Sbjct: 5 TSELCD-----LFADSVDVVDPLFVNYGGRLSYGGEITTIKCHEDKGLIDKILSQSGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL++DGGGS R A++ N A N W GIV G +R+VD++ DIG+ A+AS P+ A
Sbjct: 60 VLLIDGGGSTRRALIDVNTAQIAIENDWEGIVCYGSVREVDQLEELDIGIHAVASIPVNA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ IGE V + GG + LYAD+ GI++S L +
Sbjct: 120 AYEQIGEVDVAVNFGGVTFLPEDHLYADSTGIILSPEPLDI 160
>gi|441517980|ref|ZP_20999709.1| putative ribonuclease regulator [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441455122|dbj|GAC57670.1| putative ribonuclease regulator [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 161
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
TA++ D + ++R+ F YG + F+G + T++ F+DN L++ L E
Sbjct: 6 FTPTADLVDE-----IGPDVRSCDTQFIQYGGNREFAGVVTTVRCFQDNALLKSILSEPN 60
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
G VLV+DG GS+ A++G ++NGW GI+ NG IRD I IGV+AL ++P
Sbjct: 61 PGGVLVIDGDGSVHTALVGDIIAELGRSNGWVGIIANGAIRDAKPIGQMAIGVKALGTNP 120
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
K++K G GE+ VP+ +GG G+ L++D DGI++
Sbjct: 121 RKSSKTGAGERDVPVELGGIVFQPGDHLFSDDDGIVV 157
>gi|386388752|ref|ZP_10073605.1| regulator of ribonuclease activity A [Haemophilus
paraphrohaemolyticus HK411]
gi|385697266|gb|EIG27701.1| regulator of ribonuclease activity A [Haemophilus
paraphrohaemolyticus HK411]
Length = 166
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
+ T+ +CD I S ++ ++PIF +G FSG I T+K FE N LI + LEE+GN
Sbjct: 3 IDTSALCD-----IYSDQVDVVEPIFSSFGGASSFSGQITTVKCFESNGLIEKVLEEEGN 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVL+VDGGG++R A++ A +NGW GI+V G +R +D + DIG+ ALA P+
Sbjct: 58 GRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDVLETLDIGIHALAPIPV 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
A+ IGE P+ GG +++YAD GI++S L +
Sbjct: 118 GADDTEIGEIDTPVNFGGVTFFPEDYVYADLTGIILSPEALDL 160
>gi|254429733|ref|ZP_05043440.1| RraA family [Alcanivorax sp. DG881]
gi|196195902|gb|EDX90861.1| RraA family [Alcanivorax sp. DG881]
Length = 160
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 91/160 (56%), Gaps = 6/160 (3%)
Query: 6 TAEVCDANPQLI-VSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
T ++CD N + V L L YG R F G IVT+K FEDN ++E L G G
Sbjct: 5 TCDLCDDNADSVSVVTGLNWLS-----YGGRSAFGGEIVTVKCFEDNSRVKEHLGTDGKG 59
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
+VLVVDGGGSLR A++G A NGW G+++ G RDVD + DIGV P+K
Sbjct: 60 KVLVVDGGGSLRNALIGDMIAENAVKNGWEGVIIYGACRDVDALATLDIGVITQGCVPIK 119
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
+ ++ G+ ++ I+ GG GE++YAD +GI+ + L
Sbjct: 120 SVRRDEGQLNIDISFGGVTFRPGEFVYADNNGIITAPKAL 159
>gi|304398973|ref|ZP_07380842.1| regulator of ribonuclease activity A [Pantoea sp. aB]
gi|304353433|gb|EFM17811.1| regulator of ribonuclease activity A [Pantoea sp. aB]
Length = 195
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 39 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 93
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS+R A++ A N W G+VV G +R VDE+ +IG++A+A+ P A
Sbjct: 94 VLVIDGGGSVRRALVDAQLARLAATNEWEGLVVYGSVRQVDELEELEIGIQAIAAIPAGA 153
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 154 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDL 194
>gi|407705687|ref|YP_006829272.1| transcriptional regulator [Bacillus thuringiensis MC28]
Length = 159
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD EL+ + F+ +G+++ F G I T+KV +DNVL++E L+ G
Sbjct: 4 TTDLCDE-----FEKELQICRQSFRSFGKKEQFHGKIATVKVKDDNVLVKEGLQTLPEGT 58
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG S CA+LG N A+ AGI+VNG +RD E+ +IG+ AL + P ++
Sbjct: 59 VLVVDGEASTNCALLGDNLAAIAEERKLAGIIVNGYVRDSSELKNINIGILALGTMPNRS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+++ + G +++Y D DGI+I L
Sbjct: 119 VKEGKGERNITLQFGQVEWKPNDYVYVDEDGIIIREKSL 157
>gi|349574056|ref|ZP_08886016.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Neisseria shayeganii 871]
gi|348014339|gb|EGY53223.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Neisseria shayeganii 871]
Length = 162
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 6/159 (3%)
Query: 2 ALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEK 61
A TA++ D P + + + F+ YGRR+ F G I T++ +DN LI+ +
Sbjct: 3 ADFATADLIDLAP------DTPSCETDFKSYGRRRRFCGRIRTIRCHQDNGLIKALMNTP 56
Query: 62 GNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASH 121
GNG+VLVVDGGGS A++G A+ NGWAG V+ G IRD I+ D G++AL ++
Sbjct: 57 GNGQVLVVDGGGSRYSALMGDMIADAARQNGWAGAVIFGVIRDSVAIDQMDFGIKALGTN 116
Query: 122 PMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
P K+ K G+GE V ++ G + G +LY+D DGIL+S
Sbjct: 117 PKKSGKSGVGESDVSVSFGNLTFTPGHYLYSDEDGILVS 155
>gi|440758788|ref|ZP_20937944.1| Ribonuclease E inhibitor RraA [Pantoea agglomerans 299R]
gi|436427432|gb|ELP25113.1| Ribonuclease E inhibitor RraA [Pantoea agglomerans 299R]
Length = 161
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS+R A++ A N W G+VV G +R VDE+ +IG++A+A+ P A
Sbjct: 60 VLVIDGGGSVRRALVDAQLARLAATNEWEGLVVYGSVRQVDELEELEIGIQAIAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDL 160
>gi|260578677|ref|ZP_05846585.1| regulator of ribonuclease activity A [Corynebacterium jeikeium ATCC
43734]
gi|258603174|gb|EEW16443.1| regulator of ribonuclease activity A [Corynebacterium jeikeium ATCC
43734]
Length = 167
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + TA++ D I+ ++R+ F+ G F G I T+K F+DN L++ L+E
Sbjct: 6 LTFIPTADLVD-----IIGSDVRSCDTQFRDLGGVVEFCGKITTVKCFQDNALLKSVLQE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G +++GWAG+V+NG IRD I + G +AL +
Sbjct: 61 DNPGGVLVIDGDASMHTALVGDIIAGLGKDHGWAGVVINGPIRDSKVIGQMEFGCKALGT 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+P K+ K G GE+ V ++ GG GE++Y D+DGI++S
Sbjct: 121 NPRKSTKTGEGERDVTVSFGGVDFVPGEYIYCDSDGIIVS 160
>gi|261855476|ref|YP_003262759.1| regulator of ribonuclease activity A [Halothiobacillus neapolitanus
c2]
gi|261835945|gb|ACX95712.1| regulator of ribonuclease activity A [Halothiobacillus neapolitanus
c2]
Length = 158
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 6/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD + L L+ +P+F YG +VT+K++EDN +R L + G R
Sbjct: 5 TADLCDLHRSL-----LQVAEPVFHSYGGLSRIKASLVTVKLYEDNRALRALLSQPGEWR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
+ VD GG CA+LG A NGW +++NG IRD +I +G+ AL + PMK+
Sbjct: 60 AIAVDVGGEY-CAVLGDIMAGLAVENGWKALLINGYIRDSAQIRTMPLGIWALGTCPMKS 118
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G VP+ + G I+ G++LYAD DG+LI+ L+
Sbjct: 119 AKVADGTTQVPLALCGLSITPGDFLYADEDGVLIAPHHLT 158
>gi|395797939|ref|ZP_10477226.1| ribonuclease activity A regulator [Pseudomonas sp. Ag1]
gi|395337931|gb|EJF69785.1| ribonuclease activity A regulator [Pseudomonas sp. Ag1]
Length = 177
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V+TA++CD I +A + + G+R +GP +T+ +DNVLIRE + GN
Sbjct: 8 VSTADLCDLYWDSIGPNIQQAFPGLVSLGGKRTC-AGPAMTVTCADDNVLIRELVSSPGN 66
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G+VLV+DGG S A+LG +A NNGWAG+V+NG +RD + + V AL + P+
Sbjct: 67 GQVLVIDGGASANRALLGDVQTAKAMNNGWAGLVINGYVRDRELLALLPFAVFALGTVPL 126
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+ K G G ++ I+ G+W+Y D+DG+++S+ L +
Sbjct: 127 RPLKTGAGHLGGTVSFLNVTIAQGDWVYVDSDGLIVSKRALEL 169
>gi|68535977|ref|YP_250682.1| ribonuclease activity regulator protein RraA [Corynebacterium
jeikeium K411]
gi|123651126|sp|Q4JVU3.1|RRAAH_CORJK RecName: Full=Putative regulator of ribonuclease activity
gi|68263576|emb|CAI37064.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
[Corynebacterium jeikeium K411]
Length = 167
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 94/160 (58%), Gaps = 5/160 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + TA++ D I+ ++R+ F+ G F G I T+K F+DN L++ L+E
Sbjct: 6 LTFIPTADLVD-----IIGSDVRSCDTQFRDLGGVVEFCGKITTVKCFQDNALLKSVLQE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G +++GWAG+V+NG IRD I + G +AL +
Sbjct: 61 DNPGGVLVIDGDASMHTALVGDIIAGLGKDHGWAGVVINGPIRDSKVIGQMEFGCKALGT 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
+P K+ K G GE+ V ++ GG GE++Y D+DGI++S
Sbjct: 121 NPRKSTKTGEGERDVTVSFGGVDFIPGEYIYCDSDGIIVS 160
>gi|40889977|pdb|1VI4|A Chain A, Crystal Structure Of Regulator Of Ribonuclease Acivity A
Protein 1
Length = 174
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD ++ L Q +G+R F G IVT++ + DN +R+ L + G G+
Sbjct: 8 TPDLCDK-----YESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGK 62
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDG GS A+ G + A N W G+++ G +RDV + D+G++AL + P K
Sbjct: 63 VLVVDGHGSCHKALXGDQLAILAIKNDWEGVIIYGAVRDVVAXSEXDLGIKALGTSPFKT 122
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G G+ +V +T + G++LYAD +GIL S L V
Sbjct: 123 EKRGAGQVNVTLTXQNQIVEPGDYLYADWNGILXSETALDV 163
>gi|372277142|ref|ZP_09513178.1| ribonuclease activity regulator protein RraA [Pantoea sp. SL1_M5]
gi|381403293|ref|ZP_09927977.1| ribonuclease activity regulator protein RraA [Pantoea sp. Sc1]
gi|390437256|ref|ZP_10225794.1| ribonuclease activity regulator protein RraA [Pantoea agglomerans
IG1]
gi|380736492|gb|EIB97555.1| ribonuclease activity regulator protein RraA [Pantoea sp. Sc1]
Length = 161
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 5 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS+R A++ A N W G+V+ G +R VDE+ +IG++A+A+ P A
Sbjct: 60 VLVIDGGGSVRRALVDAQLARLAATNEWEGLVIYGSVRQVDELEELEIGIQAIAAIPAGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 120 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDL 160
>gi|213965943|ref|ZP_03394133.1| regulator of ribonuclease activity A [Corynebacterium amycolatum
SK46]
gi|213951357|gb|EEB62749.1| regulator of ribonuclease activity A [Corynebacterium amycolatum
SK46]
Length = 157
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
+ + TA++ D + ++R+ + G R F G I T+K F+DN L+++ L E
Sbjct: 3 IEFIPTADLVDE-----IGPDVRSCDTQMRNLGGRLEFCGKISTVKCFQDNALLKKVLSE 57
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G VLV+DG S+ A++G ++NGWAG+VVNG IRD I D G +AL +
Sbjct: 58 SSEGGVLVIDGDASVHTALVGDVIAGLGKDNGWAGVVVNGAIRDSKLIGEMDFGCKALGT 117
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 159
+P K+ K G GE+ V ++ GG GE LYAD+DGI++
Sbjct: 118 NPRKSTKTGEGERDVVVSFGGIDFVPGETLYADSDGIVV 156
>gi|308188609|ref|YP_003932740.1| Regulator of ribonuclease activity A [Pantoea vagans C9-1]
gi|308059119|gb|ADO11291.1| Regulator of ribonuclease activity A [Pantoea vagans C9-1]
Length = 195
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+E+CD I E+ ++P+F +G R F G I T+K FEDN L+ + LEE G GR
Sbjct: 39 TSELCD-----IYHEEVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYDLLEENGRGR 93
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGS+R A++ A N W G+V+ G +R VDE+ +IG++A+A+ P A
Sbjct: 94 VLVIDGGGSVRRALVDAQLARLAATNEWEGLVIYGSVRQVDELEELEIGIQAIAAIPAGA 153
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+GIGE V + GG G+ LYAD GI++S L +
Sbjct: 154 AGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDL 194
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.141 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,727,676,004
Number of Sequences: 23463169
Number of extensions: 117190905
Number of successful extensions: 245588
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 794
Number of HSP's that attempted gapping in prelim test: 242621
Number of HSP's gapped (non-prelim): 2967
length of query: 166
length of database: 8,064,228,071
effective HSP length: 127
effective length of query: 39
effective length of database: 9,379,372,904
effective search space: 365795543256
effective search space used: 365795543256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)