BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031066
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFE0|RRAA2_ARATH Regulator of ribonuclease-like protein 2 OS=Arabidopsis thaliana
GN=At5g16450 PE=2 SV=1
Length = 166
Score = 295 bits (755), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 142/166 (85%), Positives = 156/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN +LI SG+LRALQPIFQIYGRRQ+FSGP+VT+KVFEDN LIR+F+EE
Sbjct: 1 MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA+KKG+GE+ VP+ I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166
>sp|Q9M8R9|RRAA1_ARATH Regulator of ribonuclease-like protein 1 OS=Arabidopsis thaliana
GN=At3g02770 PE=2 SV=1
Length = 166
Score = 293 bits (750), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 140/166 (84%), Positives = 155/166 (93%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA VTTAEVCDAN ++I SG+LRALQP+FQIYGRRQ+FSGP+VT+KVFEDN LIR FLEE
Sbjct: 1 MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRALAS
Sbjct: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+KA+KKG+GE+ V + I GTRI DGEWLYADTDGIL+S+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166
>sp|Q9FH13|RRAA3_ARATH Regulator of ribonuclease-like protein 3 OS=Arabidopsis thaliana
GN=At5g56260 PE=2 SV=1
Length = 166
Score = 249 bits (635), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 141/166 (84%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MA TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGPIVTLKVFEDNVL+R LE
Sbjct: 1 MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG G VLV+DGGGS+RCA++GGN AQNNGW+GIVVNGC+RDVDEIN CD+GVRAL S
Sbjct: 61 KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+P+K+ KKG GEK+VP+ IGGT I DGEWLYAD+DGILIS+ ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166
>sp|A9AHQ6|RRAAH_BURM1 Putative regulator of ribonuclease activity OS=Burkholderia
multivorans (strain ATCC 17616 / 249) GN=Bmul_1223 PE=3
SV=1
Length = 164
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 118/160 (73%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + +G LR LQP + YG F+GP TLKVFEDN L+R LE+ G GR
Sbjct: 5 TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGG SLRCA++GGN A+ NGWAGIVV+GC+RD E+ C +GV ALA+HP K+
Sbjct: 65 VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+K+G GE+ VP+T+ GTRI+ GEW+YAD DG+L+S L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164
>sp|Q46ZV6|RRAA_CUPPJ Putative regulator of ribonuclease activity OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=Reut_A1963
PE=3 SV=1
Length = 165
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 117/159 (73%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDAN + G LR + P+F+ +G++Q F+GP TLK+FEDN L+RE LE G GR
Sbjct: 5 TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA++GGN + A+ NGW GI+VNGC+RD E++ CDIG+RALA+HP K+
Sbjct: 65 VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ V + + G + G W+Y D DG+L+S +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163
>sp|Q2SX33|RRAAH_BURTA Putative regulator of ribonuclease activity OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=BTH_I1992 PE=3 SV=1
Length = 165
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 119/162 (73%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDAN + + +G LR ++P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDANEERLAAGTLRVIEPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGW GIVVNGC+RD E+ C GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWVGIVVNGCVRDSAELAECRAGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K++K+G G VP+ + GTRI+ G+W+YAD DGIL+S A L
Sbjct: 122 RKSDKRGAGVSDVPVDVRGTRIAPGDWIYADADGILVSDAAL 163
>sp|Q63SX7|RRAAH_BURPS Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain K96243) GN=BPSL2194 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|A3NAY8|RRAAH_BURP6 Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain 668) GN=BURPS668_2477 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|Q3JQZ3|RRAAH_BURP1 Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain 1710b) GN=BURPS1710b_2618 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|A3NWR9|RRAAH_BURP0 Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain 1106a) GN=BURPS1106A_2531 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|A1V5A8|RRAAH_BURMS Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain SAVP1) GN=BMASAVP1_A2095 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|Q62J86|RRAAH_BURMA Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain ATCC 23344) GN=BMA1593 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|A2SB35|RRAAH_BURM9 Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain NCTC 10229) GN=BMA10229_A3218 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|A3MKY3|RRAAH_BURM7 Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain NCTC 10247) GN=BMA10247_1368 PE=3 SV=1
Length = 165
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 117/158 (74%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
+ T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K++K+G G P+ + GTRI G+W+YAD DG+L+S
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
>sp|B3R2J3|RRAAH_CUPTR Putative regulator of ribonuclease activity OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=RALTA_A1769 PE=3
SV=1
Length = 165
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 114/160 (71%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + G LR + P+F+ +G++ F+GP TLKVFEDN L+R LE G GR
Sbjct: 5 TTDLCDAHEDRLAEGTLRVMAPVFRAFGKQPAFAGPAATLKVFEDNSLVRATLESPGRGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGSLRCA++GGN + A+ NGW GIVVNGCIRD E++ CDIG+RALA+HP K+
Sbjct: 65 VLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAAHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ +GE V + + G + G W+Y D DGIL++ +L
Sbjct: 125 QKRNVGESEVTVQMPGAVVRPGNWIYVDVDGILVADDKLE 164
>sp|B2JIG2|RRAAH_BURP8 Putative regulator of ribonuclease activity OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=Bphy_1374 PE=3
SV=1
Length = 164
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 116/159 (72%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDA+ + +G LR L P+F +GR F G VTLKVFEDN L+R LEEKG R
Sbjct: 5 TADLCDAHEDQLTAGTLRVLDPVFSRFGRASRFGGEAVTLKVFEDNTLVRATLEEKGVAR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA++GGN + NGWAGIVV GC+RD E+N C++G+ ALA+HP ++
Sbjct: 65 VLVVDGGGSLRCALVGGNLGKLGEKNGWAGIVVFGCVRDTLELNECNLGIIALATHPQRS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+G GE+ V + + G+ + GEW+YAD+DG+L+S A L
Sbjct: 125 QKRGGGERDVSLRLPGSVVRPGEWIYADSDGVLVSSAPL 163
>sp|Q0K9J4|RRAA_CUPNH Putative regulator of ribonuclease activity OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=H16_A2230 PE=3 SV=1
Length = 165
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 112/159 (70%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA+ + G LR + P+F+ +G++ F+GP TLKVFEDN L+R LE G GR
Sbjct: 5 TTDLCDAHEDRLADGTLRVMAPVFRAFGKQGAFAGPAATLKVFEDNSLVRTALEAPGQGR 64
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGSLRCA++GGN + A+ NGW GIVVNGCIRD E++ CDIG+RALA HP K+
Sbjct: 65 VLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAVHPQKS 124
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ +GE V + + G + G W+Y D DG+L+S L
Sbjct: 125 QKRNVGESDVAVQMPGAVVRPGNWIYVDADGVLVSDERL 163
>sp|B2SXN2|RRAAH_BURPP Putative regulator of ribonuclease activity OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=Bphyt_2492
PE=3 SV=1
Length = 164
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 115/161 (71%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++CDA+ + G LR L+P+F ++ R + FSG VTLKVFEDN L+R LEEKG G
Sbjct: 4 ATADLCDAHEDQLALGTLRVLEPVFHLFSRAECFSGEAVTLKVFEDNALVRATLEEKGAG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLV+DGGGSLRCA++GGN A+ NGWAGIV+NGC+RD E+N ++G+ AL + P +
Sbjct: 64 RVLVIDGGGSLRCALVGGNLAQLAEQNGWAGIVLNGCVRDALELNEVNVGIAALTTSPRR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K G GE+ V + + G + GEW+YAD DG+L++ A L+
Sbjct: 124 GQKLGTGERDVAVHLPGALVRPGEWVYADIDGVLVASAALN 164
>sp|Q13X79|RRAAH_BURXL Putative regulator of ribonuclease activity OS=Burkholderia
xenovorans (strain LB400) GN=Bxeno_A2772 PE=3 SV=1
Length = 164
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 114/160 (71%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TA++CDA+ + G LR L+P+F ++ R FSG VTLKVFEDN L+R LEEKG G
Sbjct: 4 ATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAG 63
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLVVDGGGS RCA++GGN AQ NGWAGIV+NGC+RD E+N ++G+ ALA+ P +
Sbjct: 64 RVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRR 123
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K G GE+ V + + G + GEW+YAD+DG+L++ A L
Sbjct: 124 GQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAAL 163
>sp|Q47BF5|RRAAH_DECAR Putative regulator of ribonuclease activity OS=Dechloromonas
aromatica (strain RCB) GN=Daro_3096 PE=3 SV=1
Length = 163
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CD + +R + P+FQ YG R FSG IVTLK+FEDN L+RE E G G+
Sbjct: 5 TPDLCDEFESEL-GKTVRVVTPMFQRYGGRTSFSGQIVTLKIFEDNSLVREVFGEDGKGK 63
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLV+DGGGSLRCA++G + A NGW G+VV GCIRD +ING DIGVRAL +HP K
Sbjct: 64 VLVIDGGGSLRCALVGDQLAILANKNGWEGVVVYGCIRDSGDINGIDIGVRALNTHPQKT 123
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
KKG+G+K+V +T GG + GE+LYAD DG+L+S L+
Sbjct: 124 LKKGVGDKNVAVTFGGVTFNPGEYLYADEDGVLVSGKALT 163
>sp|Q0A9G6|RRAAH_ALHEH Putative regulator of ribonuclease activity OS=Alkalilimnicola
ehrlichei (strain MLHE-1) GN=Mlg_1172 PE=3 SV=1
Length = 161
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 110/161 (68%), Gaps = 5/161 (3%)
Query: 4 VTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN 63
V T ++CD + ELR + P+F+ +G R F GP+ T+K+FEDN +RE L E G
Sbjct: 3 VPTTDLCDD-----FADELRVMNPMFRDFGGRVRFHGPVTTVKLFEDNSAVREALSEPGE 57
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
GRVLVVDGGGS+RCA+LG N Q NGWAG+VV GC+RD E+ D+GV+AL HP+
Sbjct: 58 GRVLVVDGGGSMRCALLGDNLAALGQKNGWAGVVVYGCVRDSAELATIDLGVKALNVHPL 117
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
K+ KKGIGE+ V +T G I G+WLYAD DGI+++R L
Sbjct: 118 KSVKKGIGERDVTVTFAGITIQAGDWLYADEDGIVVARNSL 158
>sp|Q8XZP1|RRAAH_RALSO Putative regulator of ribonuclease activity OS=Ralstonia
solanacearum (strain GMI1000) GN=RSc1354 PE=3 SV=2
Length = 165
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 115/163 (70%)
Query: 3 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKG 62
++ ++CDA+ + SG +R L P+F+ +G R F+GP TLKVFEDN L+R LE+ G
Sbjct: 2 MIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAMLEQPG 61
Query: 63 NGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP 122
GRVLVVDGGGSLRCA++GGN A++NGW G++VNGC+RD E+ C++GV ALA+HP
Sbjct: 62 EGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHP 121
Query: 123 MKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
K+ KK GE+ + + + G I GEW+Y D DG+L+SR L
Sbjct: 122 RKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLVSRERLH 164
>sp|Q3KFE1|RRAAH_PSEPF Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens (strain Pf0-1) GN=Pfl01_1772 PE=3 SV=1
Length = 163
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + L+P+F +G R F G IVT+K FEDN L++E E
Sbjct: 1 MNHYLTPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KGNG+VLVVDGGGSLRCA+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGNGKVLVVDGGGSLRCALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP K K+G+G+ +VP+T G G+++YAD +G++IS + L +
Sbjct: 116 HPKKTEKRGLGDLNVPVTFAGVTFHPGQYIYADNNGVIISPSPLKM 161
>sp|A4XU32|RRAAH_PSEMY Putative regulator of ribonuclease activity OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_2087 PE=3 SV=1
Length = 162
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F YG R F G +VT+K EDN L++E ++ G GR
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFANYGGRDSFGGQMVTIKCHEDNSLVKEQVDLPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGWAGIVV GCIRDVD I D+GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWAGIVVYGCIRDVDVIAQADLGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T GG GE+LYAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFGGVTFKPGEYLYADNNGIIVSPQALSM 160
>sp|Q4ZUN7|RRAAH_PSEU2 Putative regulator of ribonuclease activity OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=Psyr_2092 PE=3 SV=1
Length = 162
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P LI + ++P+F +G R F G IVTLK FEDN +RE +E G G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSRVREQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A NGW G+++ GCIRDVD I D+GV+ALASHP K
Sbjct: 60 VLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+GIGE +VP+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGIGELNVPVTFGGVTFRPGEYLYADNNGVIISPSTLTM 160
>sp|C1DHC2|RRAAH_AZOVD Putative regulator of ribonuclease activity OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_23290
PE=3 SV=1
Length = 162
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDTDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW G+VV GCIRDVD I D+GV+ALA+HPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAARNGWEGLVVYGCIRDVDVIAQTDLGVQALATHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T GG GE+LYAD +GI++S L +
Sbjct: 120 DKRGIGDLNVPVTFGGVTFRPGEYLYADNNGIIVSPQPLKM 160
>sp|Q4KFJ3|RRAAH_PSEF5 Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_1871
PE=3 SV=1
Length = 163
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MNHYLTPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
KG G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 KGQGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>sp|Q9I2W7|RRAAH_PSEAE Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=PA1772 PE=1 SV=1
Length = 162
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHP+K
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
>sp|Q02KR3|RRAAH_PSEAB Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=PA14_41640 PE=3 SV=1
Length = 162
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHP+K
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
>sp|B7VBA7|RRAAH_PSEA8 Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain LESB58) GN=PLES_35571 PE=3 SV=1
Length = 162
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I D+GV+ALASHP+K
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L +
Sbjct: 120 DKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIVSPQALKM 160
>sp|A6V753|RRAAH_PSEA7 Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain PA7) GN=PSPA7_3534 PE=3 SV=1
Length = 162
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E +++ G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDAFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLR A+LG +A NGW GIVV GCIRDVD I ++GV+ALASHPMK
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +V +T GG GE++YAD +GI++S L++
Sbjct: 120 DKRGIGDLNVVVTFGGVTFRPGEFVYADNNGIIVSPQALNM 160
>sp|C3K0T6|RRAAH_PSEFS Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens (strain SBW25) GN=PFLU_4617 PE=3 SV=1
Length = 163
Score = 162 bits (411), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVTLK FEDN L++E ++
Sbjct: 1 MNHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGEIVTLKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GCIRDVD I D+GV+ALAS
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYIYADNNGVIVSPSPLKM 161
>sp|Q883Q6|RRAAH_PSESM Putative regulator of ribonuclease activity OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=PSPTO_2294 PE=3 SV=1
Length = 162
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 113/161 (70%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P+L+ + ++P+ +G R F G IVTLK FEDN L++E +E G G+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMLSNFGGRDSFGGQIVTLKCFEDNSLVKEQVELDGKGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGSLRCA+LG +A +GW G+V+ GC+RDVD + D+GV+ALAS+P ++
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAAKHGWEGLVIYGCVRDVDMLAQTDLGVQALASYPKRS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K+G+G+ +P+T GG GE+LYAD +G++IS + L++
Sbjct: 120 EKRGVGQLDLPVTFGGVTFRPGEYLYADNNGVIISPSPLTM 160
>sp|A5W6M0|RRAAH_PSEP1 Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=Pput_3656 PE=3 SV=1
Length = 163
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+L+S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPSPLKM 161
>sp|B1J596|RRAAH_PSEPW Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain W619) GN=PputW619_1602 PE=3 SV=1
Length = 163
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN ++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSRVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLRCA+LG +A NGW G+V+ GC+RDVD + +GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRCALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTSVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLEM 161
>sp|Q88L51|RRAAH_PSEPK Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain KT2440) GN=PP_2084 PE=3 SV=1
Length = 163
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+L+S L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFAGVTFRPGEYVYADNNGVLVSPKPLKM 161
>sp|Q7NXI6|RRAAH_CHRVO Putative regulator of ribonuclease activity OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=CV_1640 PE=3
SV=1
Length = 159
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M+L TT ++CDA E++ L P+FQ +G F GPI TLK+FEDN L+R+ L E
Sbjct: 1 MSLATT-DLCDA-----FDAEIQVLDPVFQSFGGHARFHGPIATLKLFEDNSLVRQMLGE 54
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
GNGRVLVVDGGGS RCA+LG A NGWAG+V++GC+RD + +GV+ALA+
Sbjct: 55 PGNGRVLVVDGGGSRRCALLGDQLGELAVKNGWAGLVIDGCVRDSAALGKLPLGVKALAA 114
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
HP K+ K+ G++ +P+ + G I G+WLYAD DG+++S
Sbjct: 115 HPRKSVKRDSGQRDLPLRVAGCDILPGQWLYADEDGVIVS 154
>sp|Q48JZ3|RRAAH_PSE14 Putative regulator of ribonuclease activity OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_2063
PE=3 SV=1
Length = 164
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 113/163 (69%), Gaps = 7/163 (4%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREF--LEEKGN 63
T ++CDA P LI + ++P+F +G R F G IVT+K FEDN L++E L+ KG
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTVKCFEDNSLVKEQVELDGKGK 59
Query: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPM 123
G+VLVVDGGGSLRCA+LG +A +GW G+++ GCIRDVD I D+GV+ALASHP
Sbjct: 60 GKVLVVDGGGSLRCALLGDMLAEKAARSGWEGMLIYGCIRDVDVIAQTDLGVQALASHPK 119
Query: 124 KANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
K K+GIG+ +V +T GG GE+LYAD +G++IS + L++
Sbjct: 120 KTEKRGIGDLNVLVTFGGVTFRPGEYLYADNNGVIISPSPLTM 162
>sp|Q1ICM4|RRAAH_PSEE4 Putative regulator of ribonuclease activity OS=Pseudomonas
entomophila (strain L48) GN=PSEEN1744 PE=3 SV=1
Length = 163
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVDL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLVQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T G GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVAVTFAGVTFRPGEYVYADNNGVIVSPSPLKM 161
>sp|B0KG79|RRAAH_PSEPG Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain GB-1) GN=PputGB1_1595 PE=3 SV=1
Length = 163
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P L+ + L+P+F +G R F G IVT+K FEDN L++E +E
Sbjct: 1 MQHYVTPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVEL 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALAS
Sbjct: 56 DGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALAS 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V + G GE++YAD +G+L+S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVAFAGVTFRPGEYVYADNNGVLVSPSPLEM 161
>sp|Q2SK70|RRAAH_HAHCH Putative regulator of ribonuclease activity OS=Hahella chejuensis
(strain KCTC 2396) GN=HCH_02125 PE=3 SV=1
Length = 164
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA PQL+ ++P+FQ +G + F G IVT+K FEDN ++++ +++ G+G+
Sbjct: 5 TPDLCDAYPQLV-----SVVEPMFQNFGAKSSFGGEIVTVKCFEDNSVVKQQVDQPGHGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+VVDGGGS R A+LG +A NGW GI++ GCIRDVD I D+GV+AL +HPMK
Sbjct: 60 VMVVDGGGSKRAALLGDMLAEKAAANGWEGIIIYGCIRDVDVIRQTDLGVQALGTHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ + IT GG G ++YAD +G+++S LS+
Sbjct: 120 DKRGIGDLNADITFGGVTFKPGHYVYADNNGVIVSPEPLSM 160
>sp|A4VL60|RRAAH_PSEU5 Putative regulator of ribonuclease activity OS=Pseudomonas stutzeri
(strain A1501) GN=PST_2040 PE=3 SV=1
Length = 162
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T ++CDA P L+ + ++P+F +G R F G IVT+K FEDN L+++ ++ G G+
Sbjct: 5 TPDLCDAYPDLV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDVDGTGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
V+VVDGGGSLR A+LG +A NGW G+++ GC+RDVD + ++GV+ALASHPMK
Sbjct: 60 VMVVDGGGSLRRALLGDMLAEKAARNGWEGLIIYGCVRDVDVLAQTELGVQALASHPMKT 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
+K+GIG+ +VP+T G GE++YAD +GI++S LS+
Sbjct: 120 DKRGIGDLNVPVTFCGVTFRPGEYVYADNNGIIVSPEPLSM 160
>sp|Q9S4U0|RRAAH_PSEFL Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens PE=3 SV=1
Length = 163
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
M T ++CDA P+L+ + ++P+F +G R F G IVT+K FEDN L++E ++
Sbjct: 1 MIHYVTPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQADQ 55
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G G+VLVVDGGGSLR A+LG +A NGW G+V+ GC+RDVD + D+GV+ALA
Sbjct: 56 PGAGKVLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCVRDVDVLAQTDLGVQALAP 115
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HPMK +K+GIG+ +V +T GE++YAD +G+++S + L +
Sbjct: 116 HPMKTDKRGIGDLNVVVTFASVTFRPGEYVYADNNGVIVSPSPLKM 161
>sp|Q5P203|RRAAH_AROAE Putative regulator of ribonuclease activity OS=Aromatoleum
aromaticum (strain EbN1) GN=AZOSEA25360 PE=3 SV=1
Length = 159
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 104/159 (65%), Gaps = 5/159 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CDAN ++ + P+F+ YG R F G I TLKVFEDN L+R LE G G+
Sbjct: 5 TADLCDANES-----RVKIVSPMFRSYGGRGAFCGRITTLKVFEDNSLVRTALEGPGQGK 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS+RCA++G + N WAG++V GCIRD I ++GV AL SHP+K+
Sbjct: 60 VLVVDGGGSMRCALVGDQLALLGVKNQWAGVIVYGCIRDSKAIGTMELGVFALGSHPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
KKG G+ + +T GG + G ++YAD DG+++S + L
Sbjct: 120 IKKGAGDVDIAVTFGGVTFTPGHFIYADEDGVVVSESSL 158
>sp|C1D7M1|RRAAH_LARHH Putative regulator of ribonuclease activity OS=Laribacter
hongkongensis (strain HLHK9) GN=LHK_01472 PE=3 SV=1
Length = 159
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 99/155 (63%), Gaps = 5/155 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
TA++CD S L+ L P + +G F+G I TLKVFEDN +RE L E G GR
Sbjct: 5 TADLCDE-----FSDRLQILAPGYASFGGHARFAGRIATLKVFEDNSRVREMLSEPGEGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VLVVDGGGS RCA++G A NGWAGIVV GCIRD + +GVRALA+HP+K+
Sbjct: 60 VLVVDGGGSRRCALVGDQLGALAVRNGWAGIVVYGCIRDSVALGLLPLGVRALATHPLKS 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 160
K G+GE+ + +T G G+WLYAD DG++ S
Sbjct: 120 VKNGVGERELAVTFDGATFRPGDWLYADEDGVITS 154
>sp|Q7MH54|RRAA_VIBVY Regulator of ribonuclease activity A OS=Vibrio vulnificus (strain
YJ016) GN=rraA PE=3 SV=1
Length = 173
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYMDQVDVVEPMFSNFGGRASFAGQITTVKCFEDNALIRETLEQDGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A+L G A+ N W GIVV GC+R+VDE+ +IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALLDGELAAIAEENEWEGIVVYGCVREVDELEDMNIGIQALASIPVSA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G+GE VP+ GG ++LYADT GI++S+ LS
Sbjct: 120 AMQGVGEVDVPVNFGGVTFLPEDYLYADTTGIILSQEPLS 159
>sp|Q8DCP6|RRAA_VIBVU Regulator of ribonuclease activity A OS=Vibrio vulnificus (strain
CMCP6) GN=rraA PE=3 SV=2
Length = 173
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 5/160 (3%)
Query: 6 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGR 65
T+ +CD I ++ ++P+F +G R F+G I T+K FEDN LIRE LE+ G GR
Sbjct: 5 TSALCD-----IYMDQVDVVEPMFSNFGGRASFAGQITTVKCFEDNALIRETLEQDGVGR 59
Query: 66 VLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKA 125
VL+VDGGGSLR A+L G A+ N W GIVV GC+R+VDE+ +IG++ALAS P+ A
Sbjct: 60 VLLVDGGGSLRRALLDGELAAIAEENEWEGIVVYGCVREVDELEDMNIGIQALASIPVGA 119
Query: 126 NKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 165
+G+GE VP+ GG ++LYADT GI++S+ LS
Sbjct: 120 AMQGVGEVDVPVNFGGVTFLPEDYLYADTTGIILSQEPLS 159
>sp|Q607E7|RRAAH_METCA Putative regulator of ribonuclease activity OS=Methylococcus
capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
GN=MCA1813 PE=3 SV=1
Length = 161
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNG 64
TTA +CD Q + L+ ++P+F+ +G F G I TLKVFED+VLIRE L ++ +G
Sbjct: 4 TTAGLCD---QFHGTHPLQIVEPLFRPFGAVSRFHGRITTLKVFEDSVLIRETLAQEVDG 60
Query: 65 RVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMK 124
RVLV+DGG S RCA+LGGN A +NGW GI+V GC+RD E+ IG+RAL +HP+
Sbjct: 61 RVLVIDGGASHRCALLGGNLARLAADNGWQGIIVYGCVRDSVELGTVPIGIRALHTHPLD 120
Query: 125 ANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
++K+G G++ IT +LYAD DGI++S +L
Sbjct: 121 SHKRGGGDRDCLITFASVNFRTDHYLYADEDGIVVSEEKL 160
>sp|Q21X23|RRAAH_RHOFD Putative regulator of ribonuclease activity OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=Rfer_1955 PE=3 SV=1
Length = 173
Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 107/168 (63%), Gaps = 9/168 (5%)
Query: 5 TTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGN- 63
T ++CDA+ VSG R L P+F+ +G + F GP+VT+K FEDN ++ +E G
Sbjct: 6 ATCDLCDAHKN-DVSGAFRVLPPVFRDFGGVRQFCGPVVTVKCFEDNSSVKAAVESVGYQ 64
Query: 64 -------GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVR 116
G+VLVVDGGGSLR A+LGGN A NGWAG+V++GC+RDV E+ +G+R
Sbjct: 65 ETPAGRVGKVLVVDGGGSLRRALLGGNLGAAAARNGWAGVVIDGCVRDVSELAAVGLGIR 124
Query: 117 ALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 164
ALAS P+ K+G G+ + + I G + G+WLYAD DG++++ L
Sbjct: 125 ALASMPLPTEKRGEGQSDLALQIQGVWVRPGDWLYADEDGMVLAAGRL 172
>sp|A1WU91|RRAAH_HALHL Putative regulator of ribonuclease activity OS=Halorhodospira
halophila (strain DSM 244 / SL1) GN=Hhal_0465 PE=3 SV=1
Length = 164
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%), Gaps = 2/166 (1%)
Query: 1 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60
MAL+TT ++CDA +LRA+ P+ YG R F GP+ TLK+FEDNV +RE L
Sbjct: 1 MALLTT-DLCDAYAD-EPGAQLRAMNPMLIGYGGRARFGGPVTTLKLFEDNVRVRELLSA 58
Query: 61 KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120
G+G VLVVDGGGS+RCA+LG + NGW+G ++ GC+RD E+ D GV+AL +
Sbjct: 59 PGDGGVLVVDGGGSMRCALLGDRLAELGRENGWSGAIIYGCVRDSAELAQIDFGVQALNT 118
Query: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166
HP+K+ KKG+GE+ V +T G I G+WLYAD DG++++ EL++
Sbjct: 119 HPLKSQKKGLGERDVSVTFAGVTIQSGDWLYADEDGVVVASRELTL 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.141 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,000,659
Number of Sequences: 539616
Number of extensions: 2807995
Number of successful extensions: 6225
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6015
Number of HSP's gapped (non-prelim): 215
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)