BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031074
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q556I2|AEDO_DICDI Probable 2-aminoethanethiol dioxygenase OS=Dictyostelium discoideum
GN=ado-1 PE=3 SV=2
Length = 218
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 26 ALERVRAMLDKIKPSDVGLEQEAQLVRNWPGPVLERNGRHPSLAPIKYLHLHECDSFSIG 85
L+ + ++ +IK D+ +++ L + P+ NG+ + Y L E + F++
Sbjct: 24 TLDSLVSVFKEIKCKDLKIDKPLTLTK----PI--GNGKK-----VFYYPLVENEKFTLA 72
Query: 86 IFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLD 123
IF PP++ IP H+HP MTVLSK++YGS+ S+DW+D
Sbjct: 73 IFAFPPNTCIPTHDHPQMTVLSKVLYGSISCDSFDWID 110
>sp|Q6PDY2|AEDO_MOUSE 2-aminoethanethiol dioxygenase OS=Mus musculus GN=Ado PE=1 SV=2
Length = 256
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 1 MPYYIQRLYNTCRAAF-----SPEGPVTD--EALERVRAMLDKIKPSDVGLEQEAQLVRN 53
M IQR+ F EGP E L ++++L +++ D+ + L +
Sbjct: 6 MASLIQRIARQACLTFRGSSTGSEGPAPGFPENLSLLKSLLTQVRAEDLNIAPRKALPQP 65
Query: 54 WPGPVLERNGRHPSLAPIKYLHLHECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGS 113
P RN L P+ Y+H++E + FS+G+F + + IPLH+HPGM + K++YG+
Sbjct: 66 LP-----RN-----LPPVTYMHIYETEGFSLGVFLLKSGTCIPLHDHPGMHGMLKVLYGT 115
Query: 114 LHVKSYDWLD 123
+ + D LD
Sbjct: 116 VRISCMDKLD 125
>sp|Q96SZ5|AEDO_HUMAN 2-aminoethanethiol dioxygenase OS=Homo sapiens GN=ADO PE=1 SV=2
Length = 270
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 13/113 (11%)
Query: 14 AAFSPEGPVTD---EALERVRAMLDKIKPSDVGLEQEAQLVRNWPGPVLERNGRHPSLAP 70
AA PE P+ E L +++++L +++ D+ + ++ P+L P
Sbjct: 35 AASGPEAPMQPGFPENLSKLKSLLTQLRAEDLNIAPRKATLQPL----------PPNLPP 84
Query: 71 IKYLHLHECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLD 123
+ Y+H++E D FS+G+F + + IPLH+HPGM + K++YG++ + D LD
Sbjct: 85 VTYMHIYETDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLD 137
>sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2
Length = 1805
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 28 ERVRAMLDKIKPSDVGLEQEAQLVRNWPGPVLERNG 63
E+++ + +K + ++ +E+EAQLV W G ERN
Sbjct: 1111 EQIKKVSNKTEKTEDDVEREAQLVEQWVGLTEERNA 1146
>sp|Q63886|UD11_MOUSE UDP-glucuronosyltransferase 1-1 OS=Mus musculus GN=Ugt1a1 PE=2 SV=2
Length = 535
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 4 YIQRLYNT---------CRAAFSPEGPVTDEALERVRAMLDKIKPSDVGLEQEAQLVRNW 54
++QR+ N CR +SP G + E L++ + D + P+ + L + V+++
Sbjct: 208 FLQRVKNVLLAVSENFMCRVVYSPYGSLATEILQKEVTVQDLLSPASIWL-MRSDFVKDY 266
Query: 55 PGPVL 59
P P++
Sbjct: 267 PRPIM 271
>sp|Q64550|UD11_RAT UDP-glucuronosyltransferase 1-1 OS=Rattus norvegicus GN=Ugt1a1 PE=1
SV=1
Length = 535
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 4 YIQRLYNT---------CRAAFSPEGPVTDEALERVRAMLDKIKPSDVGLEQEAQLVRNW 54
++QR+ N CR +SP G + E L++ + D + P+ + L + V+++
Sbjct: 208 FLQRVKNMIIALTENFLCRVVYSPYGSLATEILQKEVTVKDLLSPASIWLMRN-DFVKDY 266
Query: 55 PGPVL 59
P P++
Sbjct: 267 PRPIM 271
>sp|A1JHZ2|FIEF_YERE8 Cation-efflux pump FieF OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=fieF PE=3 SV=1
Length = 300
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 28 ERVRAMLDKIKPSDVGLEQEAQLVRNWPGPVLERNGRHPSLAPIKYLHLH 77
E V+A+LD+ P D ++ +V +WPG + + R P +++ LH
Sbjct: 200 EAVQALLDRALPDD-ERQEIINIVTSWPGVIGAHDLRTRQSGPTRFIQLH 248
>sp|P55865|CAS1A_XENLA Caspase-1-A OS=Xenopus laevis GN=casp1-a PE=2 SV=1
Length = 386
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 32/92 (34%)
Query: 28 ERVRAMLDKIK-----PSDVGLEQEAQLVRNWPGPVLERNGRHPSLAPIKYLHLHECDSF 82
+R RAM+D +K PS++ LE LV+N H +LA K L LHE
Sbjct: 51 DRCRAMIDSVKKKGDDPSNILLES---LVKN-----------HKTLA--KSLGLHE---- 90
Query: 83 SIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSL 114
PP + +P+ H T+ +K + G +
Sbjct: 91 -------PPMAPVPIQEHNADTIKNKDIKGVI 115
>sp|Q8G5W9|SYA_BIFLO Alanine--tRNA ligase OS=Bifidobacterium longum (strain NCC 2705)
GN=alaS PE=3 SV=1
Length = 893
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 24 DEALERVRAMLDKIKPSDVGLEQ--EAQLVRNWPGPVLERNGRHPSLAPIK 72
DE ERV A+L K+K SD L E+QL + P V + S AP+K
Sbjct: 738 DELAERVNALLAKLKESDRRLASMYESQLAASVPALVADTKN---SAAPVK 785
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,153,911
Number of Sequences: 539616
Number of extensions: 2886198
Number of successful extensions: 6485
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6480
Number of HSP's gapped (non-prelim): 12
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)