BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031077
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3B8G0|CA123_XENLA UPF0587 protein C1orf123 homolog OS=Xenopus laevis PE=2 SV=1
Length = 160
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 8/163 (4%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQG 59
MV L A LENLT L+P G +F +F KLKCG CGE+S K ++L +++P +G
Sbjct: 1 MVKFALQFKASLENLTQLRPHG----EDFRWFLKLKCGNCGEVSDKWQYITLMDSVPLKG 56
Query: 60 GKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGV 119
G+G+ +++Q+CK C RE ++ ++ P E +++ F ++ F+CRG EP+DF
Sbjct: 57 GRGSASMVQRCKLCSRENSIDILAASLHPYNAEDSET--FKTIVEFECRGLEPIDFQPQA 114
Query: 120 GWKVE-SLAGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
G+ E + GT + +I+L D+ +YDEK + V I + +F
Sbjct: 115 GFAAEGAETGTPFHEINLQEKDWTDYDEKAKESVGIYEVEHRF 157
>sp|Q9NWV4|CA123_HUMAN UPF0587 protein C1orf123 OS=Homo sapiens GN=C1orf123 PE=1 SV=1
Length = 160
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 8/163 (4%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQG 59
M L + A LEN+TNL+P G +F ++ K+KCG CGE+S K + L +++ +G
Sbjct: 1 MGKIALQLKATLENITNLRPVG----EDFRWYLKMKCGNCGEISDKWQYIRLMDSVALKG 56
Query: 60 GKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGV 119
G+G+ +++QKCK C RE ++ ++ KP E ++ F ++ F+CRG EPVDF
Sbjct: 57 GRGSASMVQKCKLCARENSIEILSSTIKPYNAEDNEN--FKTIVEFECRGLEPVDFQPQA 114
Query: 120 GWKVESL-AGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
G+ E + +GT + DI+L D+ +YDEK + V I + +F
Sbjct: 115 GFAAEGVESGTAFSDINLQEKDWTDYDEKAQESVGIYEVTHQF 157
>sp|Q32P66|CA123_BOVIN UPF0587 protein C1orf123 homolog OS=Bos taurus PE=2 SV=1
Length = 160
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 95/158 (60%), Gaps = 8/158 (5%)
Query: 6 LMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTT 64
L + A LEN+TNL+P G +F ++ K+KCG CGE+S+K + L +++ +GG+G+
Sbjct: 6 LQLKATLENVTNLRPVG----EDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSA 61
Query: 65 NLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVE 124
+++QKCK C RE ++ ++ K E + F ++ F+CRG EPVDF G+ E
Sbjct: 62 SMVQKCKLCSRENSIEILSSTIKSYNAEDNEK--FKTIVEFECRGLEPVDFQPQAGFAAE 119
Query: 125 SL-AGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
+ +GT + DI+L D+ +YDEK + V I + +F
Sbjct: 120 GVESGTVFSDINLQEKDWTDYDEKAQESVGIYEVTHQF 157
>sp|A1Z9A2|U587_DROME UPF0587 protein CG4646 OS=Drosophila melanogaster GN=CG4646 PE=2
SV=1
Length = 163
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQG 59
MV L ISA LEN+ L+ P++S+F KLKC CGE S K ++ +E +
Sbjct: 1 MVRVGLQISATLENVDKLETSH----PDYSFFLKLKCSNCGEQSDKWHDITESERVQQDS 56
Query: 60 GKGT-TNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFG 118
N KCK C RE ++ ++ P T A SG F +++F+CRG EPV+F
Sbjct: 57 RNAAGFNFFMKCKMCSRENSIDIVDKSNAPYT--ADDSGAFKTIVVFECRGAEPVEFSPR 114
Query: 119 VGWKVESLA-GTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
VGW+V S G Q+E++DLS D+ EYD+K V I KF
Sbjct: 115 VGWRVSSAENGQQFEEVDLSEDDWVEYDQKNNNSVGIYEFASKF 158
>sp|Q498R7|CA123_RAT UPF0587 protein C1orf123 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 160
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 8/163 (4%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQG 59
M L + A LEN+TNL+P G +F ++ K+KCG CGE+S+K + L +++ +G
Sbjct: 1 MGKIALQLKATLENVTNLRPVG----EDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKG 56
Query: 60 GKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGV 119
G+G+ +++QKCK C RE ++ ++ K E + F ++ F+CRG EPVDF
Sbjct: 57 GRGSASMVQKCKLCARENSIEILSSTIKSYNAEDNEK--FKTIVEFECRGLEPVDFQPQA 114
Query: 120 GWKVESL-AGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
G+ E + +GT + DI+L D+ +YDEK + V I + +F
Sbjct: 115 GFAAEGVESGTVFSDINLQEKDWTDYDEKTQESVGIFEVTHQF 157
>sp|Q8BHG2|CA123_MOUSE UPF0587 protein C1orf123 homolog OS=Mus musculus PE=2 SV=1
Length = 160
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 96/163 (58%), Gaps = 8/163 (4%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQG 59
M L + A LEN+TNL+P G +F ++ K+KCG CGE+S+K + L +++ +G
Sbjct: 1 MGKIALQLKATLENVTNLRPVG----EDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKG 56
Query: 60 GKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGV 119
G+G+ +++QKCK C RE ++ ++ K E + F ++ F+CRG EPVDF
Sbjct: 57 GRGSASMVQKCKLCARENSIDILSSTIKAYNAEDNEK--FKTIVEFECRGLEPVDFQPQA 114
Query: 120 GWKVESL-AGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
G+ + + +GT + DI+L D+ +YDEK + V I + +F
Sbjct: 115 GFAADGVESGTVFSDINLQEKDWTDYDEKAQESVGIFEVTHQF 157
>sp|A7SJ66|U587_NEMVE UPF0587 protein v1g245604 OS=Nematostella vectensis GN=v1g245604
PE=3 SV=1
Length = 159
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQG 59
MV L + A+LEN+TNL+ +G +F ++ LKC CGE++++ + L E+ P +G
Sbjct: 1 MVRIGLQLKANLENVTNLKAEG----EDFRWYLMLKCMNCGEVTKQWVYMCLMESQPVKG 56
Query: 60 GKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGV 119
G+G + + KCK C RE +V ++ P A+ +G F ++ FDCRG EP DF
Sbjct: 57 GRGYAHFVSKCKLCHRENSVDIMKDSIHPYL--ASHNGKFHTIVSFDCRGVEPTDFSPRT 114
Query: 120 GWKVESLAGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
GW E + ++DL+ D+++YDEK + V + + +F
Sbjct: 115 GWTAEGENTSTPFEVDLTEKDWSDYDEKAQNAVGVYGVTSQF 156
>sp|Q290L7|U587_DROPS UPF0587 protein GA18326 OS=Drosophila pseudoobscura pseudoobscura
GN=GA18326 PE=3 SV=1
Length = 163
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQG 59
MV L ISA LEN+ L+ P++ +F KL C CGE S K ++ +E + Q
Sbjct: 1 MVRVGLQISATLENIDKLETSH----PDYPFFVKLTCSNCGEQSDKWHDITESERV-QQD 55
Query: 60 GKGTT--NLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVF 117
+ T N KCK C RE ++ ++ P T A SG +++FDCRG EPVDF
Sbjct: 56 TRNTAGFNFFMKCKMCSRENSIDIVEKSNVPYT--ADDSGKLKTIVIFDCRGLEPVDFSP 113
Query: 118 GVGWKV-ESLAGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
GWKV S G +ED+DLS D+ EYD+K V + KF
Sbjct: 114 RSGWKVFSSENGQSFEDVDLSEDDWVEYDQKNNNSVGVYEFVSKF 158
>sp|Q9BI88|U587_CAEEL UPF0587 protein F46B6.12 OS=Caenorhabditis elegans GN=F46B6.12 PE=3
SV=2
Length = 167
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 6 LMISADLENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQGGKGTT 64
L + L+ +T+L+P D +F + KLKC CGE V L E L G +G
Sbjct: 6 LELKCQLKGITDLRPD---DTDSFHWHMKLKCTNCGEAPDHWQYVVLNEMLDVPGSRGEA 62
Query: 65 NLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVE 124
NL++KCK CGR T+T++ K E Q+ + + +FDCRG EP DF W +
Sbjct: 63 NLVEKCKLCGRVNTLTIVEDMFKSYNIE--QNEKWQQIAVFDCRGLEPFDFDPRDEWIAK 120
Query: 125 SL-AGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKFEVVK 165
S+ G + +IDLS ++ ++D+K V IS + +F ++
Sbjct: 121 SVETGNAFHEIDLSEKEWVDFDDKAMEAVEISEMSSQFTTIR 162
>sp|O74797|YGN3_SCHPO UPF0587 protein C2D10.03c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPBC2D10.03c PE=3 SV=1
Length = 157
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 6 LMISADLENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQGGKGTT 64
L ++A+L + NL P+ D+ +F Y FK++C GC E+ +S +ET G KG
Sbjct: 6 LNLNAELTGVKNLAPK---DEESFYYAFKVQCSGCREIHDNAIEISRSETHSIPGSKGEA 62
Query: 65 NLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVE 124
NLI CK C R+ +I G P S +++ +CRG E V+F+ W
Sbjct: 63 NLIWTCKNC-RKTCSFVIEGPFSPYN----DSQETKKVLVLECRGCELVEFIPQGEWIAN 117
Query: 125 -SLAGTQYEDIDLSGGDYAEYDEKGECPVMISNLRFKF 161
+ + T +++I L D+ +YDE V I+NL +
Sbjct: 118 GAESNTLFDEIVLE-DDWYDYDENASSEVSITNLEWSI 154
>sp|Q55C72|U587_DICDI UPF0587 protein OS=Dictyostelium discoideum GN=DDB_G0270194 PE=3
SV=1
Length = 156
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 1 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFF-KLKCG-CGELSQKETCVSLAETLPTQ 58
MV + + A+LE + N+ P + FF K+KC CGE+ K + L ++
Sbjct: 1 MVRQSISLKAELEEIQNIFP------ATYKIFFLKIKCSNCGEIPDK--WIGLDKSNIEV 52
Query: 59 GGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFG 118
GK NL KCK C RE ++ + + +S + FDCRG E +F
Sbjct: 53 IGKSNVNLATKCKGCNRENSIVI---EDTDYSSRTIESEKDFEIARFDCRGVEIEEFDPR 109
Query: 119 VGWKVESLAGTQYEDIDL 136
W V S +G +Y+D+DL
Sbjct: 110 DNWIVVSSSGKEYKDVDL 127
>sp|P25654|YCY0_YEAST UPF0587 protein YCR090C OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YCR090C PE=1 SV=1
Length = 182
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 22/161 (13%)
Query: 6 LMISADL-ENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQGGKGT 63
L++ A L EN+T + + ++ + F L+C C EL + ++ E KGT
Sbjct: 5 LVLKATLSENVTKVSIENT-NESRAEFAFDLQCTSCRELHDSKVIINTFEEYAMPASKGT 63
Query: 64 TNLIQKCKFCGREGTVTMIPGRGKPLTQEA------------------AQSGGFSPLMLF 105
+ + KCKFC +E +V + + LT ++ + F PL L
Sbjct: 64 ASFLMKCKFCSKELSVNLCAFEDEYLTDQSDDKWAKIKDVRKKHGLSKVKEDSFIPLSL- 122
Query: 106 DCRGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYDE 146
DCRG E + F SL+ + L ++ +YD+
Sbjct: 123 DCRGCELIKFYPDTITFEVSLSSGKVMSCQLEDNEWYDYDD 163
>sp|Q8PMY1|TRMD_XANAC tRNA (guanine-N(1)-)-methyltransferase OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=trmD PE=3 SV=1
Length = 252
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 56 PTQGGKGTTNLIQKCKFC--------GREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDC 107
P GG G LI+ + C R V + +G+PLTQ A+ P M+ C
Sbjct: 53 PFGGGPGMVMLIEPLRACLDAVQAADARPAPVIYLSPQGRPLTQVLARELAQLPRMVLVC 112
Query: 108 RGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDY 141
YE VD F LA Q D+++S GDY
Sbjct: 113 GRYEGVDERF--------LA--QAVDMEISIGDY 136
>sp|Q8PBC1|TRMD_XANCP tRNA (guanine-N(1)-)-methyltransferase OS=Xanthomonas campestris
pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=trmD PE=3 SV=1
Length = 252
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 18/94 (19%)
Query: 56 PTQGGKGTTNLIQKCKFC--------GREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDC 107
P GG G LI+ + C R V + +G+PLTQ A+ P M+ C
Sbjct: 53 PFGGGPGMVMLIEPLRACLEVAQAADARPAPVIYLSPQGRPLTQPLARELAQLPRMVLLC 112
Query: 108 RGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDY 141
YE VD F Q D+++S GDY
Sbjct: 113 GRYEGVDERF----------LDQAVDMEISIGDY 136
>sp|Q4US84|TRMD_XANC8 tRNA (guanine-N(1)-)-methyltransferase OS=Xanthomonas campestris
pv. campestris (strain 8004) GN=trmD PE=3 SV=1
Length = 252
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 18/94 (19%)
Query: 56 PTQGGKGTTNLIQKCKFC--------GREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDC 107
P GG G LI+ + C R V + +G+PLTQ A+ P M+ C
Sbjct: 53 PFGGGPGMVMLIEPLRACLEVAQAADARPAPVIYLSPQGRPLTQPLARELAQLPRMVLLC 112
Query: 108 RGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDY 141
YE VD F Q D+++S GDY
Sbjct: 113 GRYEGVDERF----------LDQAVDMEISIGDY 136
>sp|Q3BVY8|TRMD_XANC5 tRNA (guanine-N(1)-)-methyltransferase OS=Xanthomonas campestris
pv. vesicatoria (strain 85-10) GN=trmD PE=3 SV=1
Length = 252
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 56 PTQGGKGTTNLIQKCKFC--------GREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDC 107
P GG G LI+ + C R V + +G+PLTQ A+ P M+ C
Sbjct: 53 PFGGGPGMVMLIEPLRACLETVQAADTRPAPVIYLSPQGRPLTQALARELAQLPRMVLLC 112
Query: 108 RGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDY 141
YE VD F LA Q ++++S GDY
Sbjct: 113 GRYEGVDERF--------LA--QAVEMEISIGDY 136
>sp|Q2G8H2|TRMD_NOVAD tRNA (guanine-N(1)-)-methyltransferase OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=trmD PE=3 SV=1
Length = 246
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 56 PTQGGKG---TTNLIQKCKFCGREG-----TVTMIPGRGKPLTQEAAQSGGFSPLMLFDC 107
P GG G +++ K RE + M P RGKPLTQE + P ++ C
Sbjct: 55 PAGGGAGMVLRVDVLAKAIDHAREAHPGCPVIAMTP-RGKPLTQERVRQLADGPGVIVLC 113
Query: 108 RGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDYA 142
+E D G +VE ++ DI LSGG+ A
Sbjct: 114 GRFEGFDERIFAGREVEEVS---VGDIVLSGGECA 145
>sp|B6QB86|PURA_PENMQ Adenylosuccinate synthetase OS=Penicillium marneffei (strain ATCC
18224 / CBS 334.59 / QM 7333) GN=PMAA_074670 PE=3 SV=1
Length = 422
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 113 VDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYDEKG 148
V++V GWK ++ T+YED+ + Y EY EKG
Sbjct: 366 VEYVTLPGWKSNTMGLTKYEDLPENARKYVEYIEKG 401
>sp|C5PAD0|PURA_COCP7 Adenylosuccinate synthetase OS=Coccidioides posadasii (strain C735)
GN=CPC735_008660 PE=3 SV=1
Length = 419
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 106 DCRGYEPVDFVFGV--GWKVESLAGTQYEDIDLSGGDYAEYDEK 147
D E V+ V+ GWKV ++ T++ED+ + Y EY EK
Sbjct: 354 DAEELEKVEVVYETLPGWKVNTMGATKWEDLPPNAQKYIEYIEK 397
>sp|B0RXD7|TRMD_XANCB tRNA (guanine-N(1)-)-methyltransferase OS=Xanthomonas campestris
pv. campestris (strain B100) GN=trmD PE=3 SV=1
Length = 252
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 18/94 (19%)
Query: 56 PTQGGKGTTNLIQKCKFC--------GREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDC 107
P GG G LI+ + C R V + +G+PLTQ A+ P M+ C
Sbjct: 53 PFGGGPGMVMLIEPLRACLEAAKAADARPAPVIYLSPQGRPLTQPLARELAQLPRMVLLC 112
Query: 108 RGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDY 141
YE VD F Q D+++S GDY
Sbjct: 113 GRYEGVDERF----------LDQAVDMEISIGDY 136
>sp|B8M3A8|PURA_TALSN Adenylosuccinate synthetase OS=Talaromyces stipitatus (strain ATCC
10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_095260
PE=3 SV=1
Length = 422
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 113 VDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYDEKG 148
V+++ GWK ++ T+YED+ + Y EY E+G
Sbjct: 366 VEYITLPGWKTNTMGLTKYEDLPENAQKYVEYIERG 401
>sp|A4J665|TRMD_DESRM tRNA (guanine-N(1)-)-methyltransferase OS=Desulfotomaculum reducens
(strain MI-1) GN=trmD PE=3 SV=1
Length = 254
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 69 KCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESLAG 128
K K G+ G V M+ +G+P TQE A+ ++ C YE G+ +V +
Sbjct: 75 KAKNAGQVGRVIMMCPQGEPFTQEYAKELAREENLVIVCGHYE------GIDERVREVLV 128
Query: 129 TQYEDIDLSGGDYAEYDEKGECPVMI 154
T ++S GDY GE P M+
Sbjct: 129 TD----EISIGDYVLTG--GELPAMV 148
>sp|Q87H52|BETB_VIBPA Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=betB PE=3 SV=1
Length = 486
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 67 IQKCKFCGREGTVTMIPG-RGKPLTQEAAQSGGFSPLMLFD 106
I K F G GT ++ G K L Q + GG SPL++FD
Sbjct: 218 IAKVSFTGESGTGKVVMGDSAKTLKQVTMELGGKSPLIVFD 258
>sp|Q9A238|HSLU_CAUCR ATP-dependent protease ATPase subunit HslU OS=Caulobacter
crescentus (strain ATCC 19089 / CB15) GN=hslU PE=3 SV=1
Length = 430
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 16/77 (20%)
Query: 33 FKLKCGCGELSQKETCVSLAET------LPTQGGKGTTNLIQKCKFCGREGTVTMIPGRG 86
F+ K GEL KE + LA+T +P Q G NL K G GR
Sbjct: 147 FRKKLRAGELDDKEVELQLADTGGPSFDIPGQPGAAVFNLSDMMKSLG--------GGRT 198
Query: 87 KPLTQEAAQSGGFSPLM 103
K T + SG ++PL+
Sbjct: 199 K--THKTTVSGAWAPLI 213
>sp|B8GW06|HSLU_CAUCN ATP-dependent protease ATPase subunit HslU OS=Caulobacter
crescentus (strain NA1000 / CB15N) GN=hslU PE=3 SV=1
Length = 430
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 16/77 (20%)
Query: 33 FKLKCGCGELSQKETCVSLAET------LPTQGGKGTTNLIQKCKFCGREGTVTMIPGRG 86
F+ K GEL KE + LA+T +P Q G NL K G GR
Sbjct: 147 FRKKLRAGELDDKEVELQLADTGGPSFDIPGQPGAAVFNLSDMMKSLG--------GGRT 198
Query: 87 KPLTQEAAQSGGFSPLM 103
K T + SG ++PL+
Sbjct: 199 K--THKTTVSGAWAPLI 213
>sp|A2QB52|PURA_ASPNC Adenylosuccinate synthetase OS=Aspergillus niger (strain CBS 513.88
/ FGSC A1513) GN=An01g13920 PE=3 SV=1
Length = 424
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 113 VDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYDEKG 148
V++V GWK ++ +YED+ + Y EY E+G
Sbjct: 367 VEYVTLPGWKSNTMGVKKYEDLPANARAYIEYIERG 402
>sp|B6CZ17|GRK7A_XENLA G protein-coupled receptor kinase 7A OS=Xenopus laevis GN=grk7-a
PE=1 SV=1
Length = 551
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 86 GKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKV-ESLAG 128
GKP+TQ A +G +P +L D PVD+ F +G + E +AG
Sbjct: 342 GKPITQRAGTNGYMAPEILTDVDYSYPVDW-FAMGCSIYEMIAG 384
>sp|Q8NNX7|TRMD_CORGL tRNA (guanine-N(1)-)-methyltransferase OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=trmD PE=3 SV=2
Length = 289
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 86 GKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYD 145
GKP TQ AQ+ ++F C YE G+ +V A +Y ++S GDY
Sbjct: 135 GKPFTQADAQAWSNEEHIVFACGRYE------GIDQRVIDDAANRYRVREVSIGDYVLI- 187
Query: 146 EKGECPVMI 154
GE V++
Sbjct: 188 -GGEVAVLV 195
>sp|Q0CM45|PURA_ASPTN Adenylosuccinate synthetase OS=Aspergillus terreus (strain NIH 2624
/ FGSC A1156) GN=ATEG_05239 PE=3 SV=1
Length = 424
Score = 29.6 bits (65), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 113 VDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYDEKG 148
V+++ GWK ++ +YED+ + Y EY E+G
Sbjct: 367 VEYITLPGWKSNTMGVKKYEDLPANARAYIEYIERG 402
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,177,547
Number of Sequences: 539616
Number of extensions: 2719630
Number of successful extensions: 4692
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4644
Number of HSP's gapped (non-prelim): 41
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)