BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031078
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64764|TRXO1_ARATH Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana GN=At2g35010
PE=2 SV=1
Length = 194
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 74/94 (78%)
Query: 64 SLQFHRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVI 123
SL R+L S G + +++++S EEF +++ K +D SLP++FYFTAAWCGPC+FI PVI
Sbjct: 69 SLPHRRSLCSEAGGENGVVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVI 128
Query: 124 GELSAKHPHVTTYKIDIDQKGLESTLSKLNISAV 157
ELS ++P VTTYK+DID+ G+ +T+SKLNI+AV
Sbjct: 129 VELSKQYPDVTTYKVDIDEGGISNTISKLNITAV 162
>sp|Q93VQ9|TRXO2_ARATH Thioredoxin O2, mitochondrial OS=Arabidopsis thaliana GN=At1g31020
PE=2 SV=1
Length = 159
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Query: 47 RNYIPASSS---QSQSQMLPSLQFHRTLFSSPDGP-SNILVIESGEEFNSSLGKVKDDSL 102
RN A+S+ ++ L + +R F +G S+ +V++S EFNS+L K +D SL
Sbjct: 13 RNSFLAASTVYVSNEFNFLNTSLLNRRSFCFAEGDRSSFVVLKSEAEFNSALSKARDGSL 72
Query: 103 PAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAV 157
P++FYFTAAWCGPC+ I PVI ELS K+P VTTYK+DID+ GL + + KLN+SAV
Sbjct: 73 PSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDIDEGGLSNAIGKLNVSAV 127
>sp|Q655X0|TRXO_ORYSJ Thioredoxin O, mitochondrial OS=Oryza sativa subsp. japonica
GN=Os06g0665900 PE=2 SV=2
Length = 174
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 71 LFS---SPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELS 127
LFS S G S+++V+ S E F S + KV+ + LPA+FY+TA WCGPC+ + PVI +LS
Sbjct: 51 LFSTTPSSSGDSSMVVVGSAESFTSIMSKVEAEKLPAVFYYTAVWCGPCRAMAPVISKLS 110
Query: 128 AKHPHVTTYKIDIDQKGLESTLSKLNISAV 157
+++P + YK+DID G+ S LS L I +V
Sbjct: 111 SRYPKIPIYKVDIDMDGVGSKLSDLKIFSV 140
>sp|Q6ES52|TDX_ORYSJ TPR repeat-containing thioredoxin TDX OS=Oryza sativa subsp.
japonica GN=Os09g0401200 PE=2 SV=1
Length = 317
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
+++ I S E ++ L S + YFTAAWCGPC+FI PV L+ KH +V K+D
Sbjct: 209 DVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKVD 268
Query: 140 IDQKGLESTLSKLNISAVVSSLSPSF 165
ID+ L S + N+S+V PSF
Sbjct: 269 IDE--LNSVAYRWNVSSV-----PSF 287
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
++ + +EF++ + K K+ I FTA+WCGPC+FI PV E + K P K+D+
Sbjct: 8 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67
Query: 141 DQKGLESTLSKLNISAV 157
D+ L+ K N+ A+
Sbjct: 68 DE--LKEVAEKYNVEAM 82
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
++ + +EF++ + K K+ I FTA+WCGPC+FI PV E + K P K+D+
Sbjct: 8 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67
Query: 141 DQKGLESTLSKLNISAV 157
D+ L+ K N+ A+
Sbjct: 68 DE--LKEVAEKYNVEAM 82
>sp|Q96419|TRXH_FAGES Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1
Length = 116
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
+ ++ + +E+N K KD + FTA+WCGPC+ I P + EL+ K PHV +K+
Sbjct: 5 AQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKV 64
Query: 139 DIDQKGLESTLSKLNISAVVSSLSPSF 165
D+D L+ + + A+ PSF
Sbjct: 65 DVDD--LKDVAEEYKVEAM-----PSF 84
>sp|Q43636|TRXH_RICCO Thioredoxin H-type OS=Ricinus communis PE=3 SV=1
Length = 118
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 88 EEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
E +N L K D + FTA+WCGPC+FI P + EL+ K P+VT K+D+D+
Sbjct: 15 EAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDE 69
>sp|P29449|TRXH1_TOBAC Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1
Length = 126
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 88 EEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
EE+N K + + FTA+WCGPC+FI P++ +++ K PHV K+D+D+
Sbjct: 21 EEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDE 75
>sp|Q07090|TRXH2_TOBAC Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1
Length = 118
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 78 PSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYK 137
++ + + + +N L K DD + FTA+WCGPCKFI EL+ K P VT K
Sbjct: 4 EGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLK 63
Query: 138 IDIDQKGLESTLSKLNISAV 157
+D+D+ L+S + + A+
Sbjct: 64 VDVDE--LKSVATDWAVEAM 81
>sp|P68176|TRXH_BRAOL Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1
Length = 123
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
++ + E++N+ L K+ + + FTA WC PC+FI P+ EL+ KH V +K+D
Sbjct: 12 EVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVD 71
Query: 140 IDQKGLESTLSKLNISAV 157
+D+ L + + ++ A+
Sbjct: 72 VDE--LATVAQEFDVQAM 87
>sp|P68177|TRXH1_BRANA Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1
Length = 123
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 80 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKID 139
++ + E++N+ L K+ + + FTA WC PC+FI P+ EL+ KH V +K+D
Sbjct: 12 EVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVD 71
Query: 140 IDQKGLESTLSKLNISAV 157
+D+ L + + ++ A+
Sbjct: 72 VDE--LATVAQEFDVQAM 87
>sp|O64432|TRXH_BRARA Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1
Length = 123
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
++ + E++N+ L K+ + + FTA WC PC+FI P+ EL+ KH V +K+
Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKV 70
Query: 139 DIDQKGLESTLSKLNISAV 157
D+D+ L + + ++ A+
Sbjct: 71 DVDE--LATVAKEFDVQAM 87
>sp|Q9CAS1|TRXH8_ARATH Thioredoxin H8 OS=Arabidopsis thaliana GN=TRX8 PE=2 SV=1
Length = 148
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
I+ I++ ++ S L +KD + + FTA WCGPCK + P + EL+AK+ V KID+
Sbjct: 39 IVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKIDV 98
Query: 141 DQKGLESTLSKLNISAV 157
D L S + N+S +
Sbjct: 99 D--VLMSVWMEFNLSTL 113
>sp|P29448|TRXH1_ARATH Thioredoxin H1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1
Length = 114
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 73 SSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPH 132
+S +G ++ + E +N L K + + FTA+WCGPC+FI P +L+ K P+
Sbjct: 2 ASEEG--QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN 59
Query: 133 VTTYKIDIDQKGLESTLSKLNISAV 157
V K+D D+ L+S S I A+
Sbjct: 60 VLFLKVDTDE--LKSVASDWAIQAM 82
>sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1
Length = 106
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 96 KVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNIS 155
KV D + P + F A WCGPCK I P + +LS H + YK+D+D+ LS++ S
Sbjct: 15 KVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDE------LSEVAAS 68
Query: 156 AVVSSLSPSF 165
VS++ P+F
Sbjct: 69 NGVSAM-PTF 77
>sp|Q8VWG7|TDX_ARATH TPR repeat-containing thioredoxin TDX OS=Arabidopsis thaliana
GN=TDX PE=1 SV=1
Length = 380
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 105 IFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAV 157
I YFTA WCGPC+++ P+ L+ +H V K+DID+ + NIS+V
Sbjct: 296 ILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKVDIDKAN--DVAASWNISSV 346
>sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX1 PE=1 SV=3
Length = 103
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 85 ESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKG 144
++ EF+S++ + D L + F A WCGPCK I P+I + S ++P YK+D+D+ G
Sbjct: 6 KTASEFDSAIAQ---DKL-VVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELG 61
>sp|Q9AS75|TRH41_ORYSJ Thioredoxin H4-1 OS=Oryza sativa subsp. japonica GN=Os01g0168200
PE=2 SV=1
Length = 131
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
N+ VI + E ++ + + D I F+AAWCGPC+ I PV E+S +P I
Sbjct: 21 GNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYAEMSQTYPQFMFLTI 80
Query: 139 DIDQ 142
D+D+
Sbjct: 81 DVDE 84
>sp|O65049|TRXH_PICMA Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1
Length = 125
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
N+ S E + S L + D FTA WCGPC+ I PV ELS K P + K+
Sbjct: 4 GNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKV 63
Query: 139 DIDQKGLESTLSKLNISAV 157
D+D+ L + ++ A+
Sbjct: 64 DVDE--LRDVAQEWDVEAM 80
>sp|Q39241|TRXH5_ARATH Thioredoxin H5 OS=Arabidopsis thaliana GN=TRX5 PE=1 SV=1
Length = 118
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
G ++ + E +N + + + FTA+WC PC+FI PV E++ K +V +
Sbjct: 3 GEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFF 62
Query: 137 KIDIDQKGLESTLSKLNISAV 157
KID+D+ L++ + + A+
Sbjct: 63 KIDVDE--LQAVAQEFKVEAM 81
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 108 FTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDID 141
F A WCGPCK + PV+ L+A+ PHVT K+DID
Sbjct: 23 FFAEWCGPCKMLTPVLEALAAELPHVTILKVDID 56
>sp|Q0DKF1|TRH42_ORYSJ Thioredoxin H4-2 OS=Oryza sativa subsp. japonica GN=Os05g0169000
PE=2 SV=1
Length = 132
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
N+ VI S E+++ + + D + F+A+WCGPC+ I P+ E+S +P + I
Sbjct: 22 GNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGPCRVIAPIYAEMSKTYPQLMFLTI 81
Query: 139 DIDQ 142
D+D
Sbjct: 82 DVDD 85
>sp|Q42403|TRXH3_ARATH Thioredoxin H3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1
Length = 118
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
++ + E++ L + + FTA WC PC+FI PV +L+ KH V +
Sbjct: 3 AEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFF 62
Query: 137 KIDIDQ 142
K+D+D+
Sbjct: 63 KVDVDE 68
>sp|Q86VQ3|TXND2_HUMAN Thioredoxin domain-containing protein 2 OS=Homo sapiens GN=TXNDC2
PE=1 SV=4
Length = 553
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 16 RQVLNPNSTNIAKSLISH-STNNTTVPKIPSFRNYIPAS--SSQSQSQMLPS-----LQF 67
+Q + P +I KSL +PK P P S +S + PS L+
Sbjct: 379 KQAIQPKEGDIPKSLEEAIPPKEIDIPKSPE-ETIQPKEDDSPKSLEEATPSKEGDILKP 437
Query: 68 HRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELS 127
P+G + VI S E+F +SL K + L A+ F+A WCGPC+ I P LS
Sbjct: 438 EEETMEFPEG-DKVKVILSKEDFEASL-KEAGERLVAV-DFSATWCGPCRTIRPFFHALS 494
Query: 128 AKHPHVTTYKIDID 141
KH V ++D D
Sbjct: 495 VKHEDVVFLEVDAD 508
>sp|Q9C9Y6|TRXH9_ARATH Thioredoxin H9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1
Length = 140
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 68 HRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELS 127
H FS N+ +I + E ++ L + D + F+A WCGPCK + P ELS
Sbjct: 16 HNVEFSG----GNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELS 71
Query: 128 AKHPHVTTYKIDIDQ 142
KH + +D+D+
Sbjct: 72 EKHSSLMFLLVDVDE 86
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 108 FTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDID 141
F A WCGPCK + PV+ L+A+ P+VT K+DID
Sbjct: 23 FFAEWCGPCKMLTPVLEALAAELPYVTILKLDID 56
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 108 FTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
F A WCGPC+ + P++ L+A+ PHVT KI+ID+
Sbjct: 23 FFAEWCGPCRMLTPILENLAAELPHVTIGKINIDE 57
>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX2 PE=1 SV=3
Length = 104
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
++S E++S+L D L + +F A WCGPCK I P+I + + ++ YK+D+D+
Sbjct: 5 LKSASEYDSALAS--GDKLVVVDFF-ATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDE 60
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 97 VKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHP-HVTTYKIDIDQ 142
V + LP + F A+WCGPCK I PVIG+LS ++ + YK++ D+
Sbjct: 80 VVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDE 126
>sp|O64394|TRXH_WHEAT Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3
Length = 127
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
G ++ + S E++ + + + FTA+WCGPC+ + P+ +L+ K P
Sbjct: 16 GAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFL 75
Query: 137 KIDIDQ 142
K+D+D+
Sbjct: 76 KVDVDE 81
>sp|Q851R5|TRH22_ORYSJ Thioredoxin H2-2 OS=Oryza sativa subsp. japonica GN=Os03g0800700
PE=2 SV=1
Length = 134
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 67 FHRTLFSSP-----DGPSNILVIESGEEFNSSLGKVKDDSLPAIFY-FTAAWCGPCKFIW 120
F T+F+ P G S ++ + S ++ G K + I F+A WCGPC+FI
Sbjct: 4 FFSTMFTPPPAADDGGDSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCGPCRFIE 63
Query: 121 PVIGELSAKHPHVTTYKIDIDQ 142
P +++ + +KID+D+
Sbjct: 64 PAFKDMAGRFADAVFFKIDVDE 85
>sp|Q38879|TRXH2_ARATH Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2
Length = 133
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 78 PSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYK 137
PS +L S + ++K+ + + F+A+WCGPC+ I P I ++ K V K
Sbjct: 24 PSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVK 83
Query: 138 IDIDQKGLESTLSKLNISAV 157
+D+D+ L + N++A+
Sbjct: 84 LDVDE--LPDVAKEFNVTAM 101
>sp|O96952|THIO_GEOCY Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1
Length = 106
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQK 143
+++ +F+ +L D + + FTA+WCGPC+ I P E++ + P V YK+D+D+
Sbjct: 5 LKTKADFDQALKDAGDKLV--VIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDEN 62
Query: 144 GLESTLSKLN 153
+ K+
Sbjct: 63 DETAEAEKIQ 72
>sp|P80028|TRXH_CHLRE Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3
Length = 113
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELS 127
+++VI+S +++ L K K++ P + FTA WCGPCK I P+ LS
Sbjct: 3 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLS 51
>sp|Q9XIF4|TRXH7_ARATH Thioredoxin H7 OS=Arabidopsis thaliana GN=TRX7 PE=2 SV=1
Length = 129
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
++ IES ++ S +K + + FTA WCGPCK + P + E+++K+ ++D+
Sbjct: 23 VVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAVFARVDV 82
Query: 141 DQ 142
D+
Sbjct: 83 DR 84
>sp|Q6P902|TXND2_MOUSE Thioredoxin domain-containing protein 2 OS=Mus musculus GN=Txndc2
PE=1 SV=1
Length = 515
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
+ VI+ EEF L K + L A+ F+AAWCGPC+ + P+ LS KH V ++D
Sbjct: 412 VRVIKDKEEFEEVL-KDAGEKLVAV-DFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDT 469
Query: 141 D 141
+
Sbjct: 470 E 470
>sp|Q6Z4I3|TRH21_ORYSJ Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800
PE=2 SV=1
Length = 138
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 77 GPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTY 136
G S ++ + S +++ K+ + + F+A+WCGPCK + PV E++ + V
Sbjct: 19 GESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFL 78
Query: 137 KIDIDQ 142
K+D+D+
Sbjct: 79 KVDVDE 84
>sp|P85801|TRXH_POPJC Thioredoxin H-type OS=Populus jackii PE=1 SV=1
Length = 139
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 79 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKI 138
N+ +I + E ++ L + D + F+A WCGPCK I P ELS +P + I
Sbjct: 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVI 83
Query: 139 DIDQ 142
D+D+
Sbjct: 84 DVDE 87
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 63 PSLQFHRTLFSSPDGPSNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPV 122
P+ FH T S ++ G +F +V + P + F A WCGPCK + P
Sbjct: 48 PARTFHTTRVCS-----TTFNVQDGPDFQD---RVVNSETPVVVDFHAQWCGPCKILGPR 99
Query: 123 IGELSAK-HPHVTTYKIDID 141
+ ++ AK H V K+DID
Sbjct: 100 LEKMVAKQHGKVVMAKVDID 119
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 101 SLPAIFYFTAAWCGPCKFIWPVIGELSA-KHPHVTTYKIDID 141
S P + F A WCGPCK + PV+ E++A K +T KID+D
Sbjct: 23 SKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVD 64
>sp|O34357|YTPP_BACSU Thioredoxin-like protein YtpP OS=Bacillus subtilis (strain 168)
GN=ytpP PE=2 SV=1
Length = 107
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
IES +E + VKDD ++F F+A WC C+F+ P + EL A P T Y +D D+
Sbjct: 4 IESTQELEKA---VKDDW--SVFMFSADWCPDCRFVEPFLPELEANFPEFTYYYVDRDK 57
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAK-HPHVTTYKIDID 141
I+ G +F +V + P + F A WCGPCK + P + ++ AK H V K+DID
Sbjct: 64 IQDGPDFQD---RVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 97 VKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHP-HVTTYKIDIDQ 142
V + LP + + A WCGPCK I PV+G+LS ++ + YK++ D+
Sbjct: 87 VMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDE 133
>sp|Q8LD49|TRXX_ARATH Thioredoxin X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2
SV=2
Length = 182
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 85 ESGE-EFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKH-PHVTTYKIDID 141
E GE EF+S+ V + + P + F A WCGPCK I+P + LS ++ +T KID D
Sbjct: 73 EIGESEFSST---VLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHD 128
>sp|P10639|THIO_MOUSE Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3
Length = 105
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
+ +IES E F +L D + + F+A WCGPCK I P L K+ +V ++D+
Sbjct: 2 VKLIESKEAFQEALAAAGDKLV--VVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDV 59
Query: 141 D 141
D
Sbjct: 60 D 60
>sp|Q1ZXE0|THIO4_DICDI Putative thioredoxin-4 OS=Dictyostelium discoideum GN=trxD PE=3
SV=2
Length = 104
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 104 AIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQ 142
I F A WCG CK + P+ +LS ++P VT K++ID+
Sbjct: 22 VIINFGAEWCGACKVLEPIFNKLSTQYPLVTFLKVEIDK 60
>sp|P11232|THIO_RAT Thioredoxin OS=Rattus norvegicus GN=Txn PE=1 SV=2
Length = 105
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 81 ILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDI 140
+ +IES E F +L D + + F+A WCGPCK I P L K+ +V ++D+
Sbjct: 2 VKLIESKEAFQEALAAAGDKLV--VVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDV 59
Query: 141 D 141
D
Sbjct: 60 D 60
>sp|Q68Y00|THIO_RICTY Thioredoxin OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=trxA PE=3 SV=1
Length = 105
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 96 KVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAK-HPHVTTYKIDIDQ 142
+V + LP I F A WCGPCK + P+I E+S + V K++ID+
Sbjct: 13 EVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDE 60
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 84 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAK-HPHVTTYKIDID 141
I+ G +F +V + P + F A WCGPCK + P + ++ AK H V K+DID
Sbjct: 64 IQDGPDFQD---RVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDID 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,179,238
Number of Sequences: 539616
Number of extensions: 2231906
Number of successful extensions: 6688
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 6387
Number of HSP's gapped (non-prelim): 356
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)