Query 031082
Match_columns 166
No_of_seqs 137 out of 1453
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 08:58:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031082.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031082hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10146 aminoalkylphosphonic 99.9 2.4E-20 5.1E-25 127.3 12.5 123 42-166 2-130 (144)
2 PRK03624 putative acetyltransf 99.8 8.8E-18 1.9E-22 113.4 13.1 118 43-166 2-122 (140)
3 KOG3139 N-acetyltransferase [G 99.8 1.1E-17 2.4E-22 113.1 12.4 121 45-166 15-138 (165)
4 KOG3235 Subunit of the major N 99.8 4.2E-18 9.1E-23 114.6 9.2 122 44-165 2-125 (193)
5 TIGR02406 ectoine_EctA L-2,4-d 99.8 2.1E-17 4.6E-22 114.8 11.5 119 46-166 1-120 (157)
6 KOG3216 Diamine acetyltransfer 99.8 3.5E-17 7.5E-22 109.6 11.9 122 44-166 4-138 (163)
7 KOG3234 Acetyltransferase, (GN 99.7 3.5E-18 7.6E-23 114.8 6.9 122 44-166 2-123 (173)
8 PRK09491 rimI ribosomal-protei 99.7 4.8E-17 1E-21 111.4 12.5 117 43-166 1-117 (146)
9 PTZ00330 acetyltransferase; Pr 99.7 9.9E-17 2.1E-21 109.7 13.3 119 43-166 6-133 (147)
10 COG0456 RimI Acetyltransferase 99.7 4.7E-17 1E-21 114.5 12.0 124 42-166 10-146 (177)
11 TIGR02382 wecD_rffC TDP-D-fuco 99.7 6.7E-17 1.4E-21 115.7 12.7 119 44-166 44-177 (191)
12 TIGR03103 trio_acet_GNAT GNAT- 99.7 7.9E-17 1.7E-21 131.4 14.4 125 41-166 80-209 (547)
13 PRK10140 putative acetyltransf 99.7 1.7E-16 3.7E-21 110.1 14.0 122 44-166 4-133 (162)
14 TIGR01575 rimI ribosomal-prote 99.7 1.7E-16 3.7E-21 106.0 13.2 108 53-166 1-108 (131)
15 TIGR03827 GNAT_ablB putative b 99.7 2.7E-16 5.8E-21 118.0 13.1 121 41-166 113-237 (266)
16 PRK10975 TDP-fucosamine acetyl 99.7 3.4E-16 7.4E-21 112.2 12.9 119 44-166 47-180 (194)
17 PHA01807 hypothetical protein 99.7 2.5E-16 5.5E-21 108.5 11.4 116 49-166 9-135 (153)
18 PF00583 Acetyltransf_1: Acety 99.7 5.4E-16 1.2E-20 96.0 9.1 77 88-166 1-79 (83)
19 PLN02706 glucosamine 6-phospha 99.7 3.7E-15 8.1E-20 102.4 13.9 121 42-166 5-136 (150)
20 PRK07757 acetyltransferase; Pr 99.7 1.6E-15 3.5E-20 104.5 11.5 114 43-166 1-114 (152)
21 PF13527 Acetyltransf_9: Acety 99.7 3.6E-15 7.8E-20 99.6 12.6 113 45-166 1-121 (127)
22 PRK07922 N-acetylglutamate syn 99.7 3E-15 6.6E-20 105.1 12.3 114 43-166 5-119 (169)
23 PHA00673 acetyltransferase dom 99.7 5.8E-15 1.2E-19 101.0 12.9 116 48-166 11-138 (154)
24 PF13420 Acetyltransf_4: Acety 99.6 8.8E-15 1.9E-19 100.9 11.9 118 46-166 1-131 (155)
25 TIGR01686 FkbH FkbH-like domai 99.6 1.5E-14 3.2E-19 111.3 14.1 118 42-166 185-313 (320)
26 PF13673 Acetyltransf_10: Acet 99.6 1.7E-14 3.6E-19 94.8 12.3 101 53-166 1-114 (117)
27 PRK10809 ribosomal-protein-S5- 99.6 4.4E-14 9.5E-19 101.2 14.7 123 43-166 17-158 (194)
28 PF13523 Acetyltransf_8: Acety 99.6 2.9E-14 6.3E-19 98.2 12.6 120 46-166 1-133 (152)
29 PLN02825 amino-acid N-acetyltr 99.6 9.3E-15 2E-19 117.6 10.7 114 45-166 369-482 (515)
30 PRK10514 putative acetyltransf 99.6 2.1E-14 4.5E-19 98.0 11.0 110 43-166 1-118 (145)
31 TIGR03448 mycothiol_MshD mycot 99.6 9.6E-14 2.1E-18 105.3 14.1 123 42-166 148-280 (292)
32 COG1247 Sortase and related ac 99.6 1.7E-13 3.7E-18 95.1 13.7 122 44-166 2-135 (169)
33 TIGR01890 N-Ac-Glu-synth amino 99.6 3.4E-14 7.5E-19 113.2 11.4 115 44-166 283-397 (429)
34 COG1246 ArgA N-acetylglutamate 99.6 2.7E-14 5.9E-19 96.6 8.6 105 45-154 2-107 (153)
35 PRK15130 spermidine N1-acetylt 99.6 1.2E-13 2.7E-18 98.1 12.3 121 43-166 6-137 (186)
36 PRK12308 bifunctional arginino 99.5 4.9E-14 1.1E-18 116.7 11.3 113 44-166 464-576 (614)
37 PRK05279 N-acetylglutamate syn 99.5 3.9E-14 8.5E-19 113.3 10.4 115 44-166 295-409 (441)
38 KOG3396 Glucosamine-phosphate 99.5 4.1E-13 8.8E-18 88.4 10.6 119 44-166 7-136 (150)
39 TIGR03585 PseH pseudaminic aci 99.5 3E-13 6.4E-18 93.3 10.6 118 45-166 2-130 (156)
40 PRK10314 putative acyltransfer 99.5 1.4E-13 3E-18 95.2 8.6 114 46-166 9-126 (153)
41 PRK10151 ribosomal-protein-L7/ 99.5 9.4E-13 2E-17 93.1 12.7 121 43-166 10-147 (179)
42 PRK01346 hypothetical protein; 99.5 6.7E-13 1.5E-17 105.3 13.1 117 43-166 6-128 (411)
43 PF13302 Acetyltransf_3: Acety 99.5 1.9E-12 4.2E-17 87.6 12.8 121 44-166 2-138 (142)
44 TIGR03448 mycothiol_MshD mycot 99.5 4E-13 8.7E-18 101.9 10.2 109 48-166 5-120 (292)
45 PRK10562 putative acetyltransf 99.5 1.3E-12 2.9E-17 89.3 10.7 106 46-166 2-117 (145)
46 PRK09831 putative acyltransfer 99.4 3.2E-13 6.9E-18 92.6 7.2 102 45-166 2-118 (147)
47 PF13508 Acetyltransf_7: Acety 99.4 8.5E-13 1.8E-17 81.1 7.7 72 83-166 3-74 (79)
48 COG3153 Predicted acetyltransf 99.4 8.6E-12 1.9E-16 86.8 13.5 110 42-154 2-117 (171)
49 KOG2488 Acetyltransferase (GNA 99.4 7.5E-12 1.6E-16 87.1 10.5 114 52-166 54-174 (202)
50 KOG3138 Predicted N-acetyltran 99.4 1.7E-12 3.6E-17 91.4 6.9 121 43-166 16-144 (187)
51 PRK13688 hypothetical protein; 99.2 6.6E-11 1.4E-15 81.9 8.5 99 46-166 20-125 (156)
52 PF08445 FR47: FR47-like prote 99.2 1.7E-10 3.7E-15 72.1 8.5 53 112-166 22-74 (86)
53 cd02169 Citrate_lyase_ligase C 99.2 1.1E-10 2.3E-15 88.7 8.2 70 84-166 7-76 (297)
54 COG3981 Predicted acetyltransf 99.1 1.7E-09 3.8E-14 74.4 9.8 119 44-164 4-149 (174)
55 cd04301 NAT_SF N-Acyltransfera 99.0 3.1E-09 6.8E-14 61.1 8.4 63 86-151 2-64 (65)
56 COG3393 Predicted acetyltransf 99.0 3E-09 6.4E-14 78.1 8.3 78 83-166 177-254 (268)
57 TIGR00124 cit_ly_ligase [citra 99.0 3.4E-09 7.4E-14 81.7 8.5 72 82-166 30-101 (332)
58 COG1670 RimL Acetyltransferase 98.9 2.6E-08 5.6E-13 69.9 10.8 73 93-166 77-150 (187)
59 KOG3397 Acetyltransferases [Ge 98.8 3.7E-08 8E-13 67.9 9.0 116 44-165 13-132 (225)
60 COG2153 ElaA Predicted acyltra 98.7 6.3E-08 1.4E-12 64.9 6.5 114 46-165 10-127 (155)
61 TIGR01211 ELP3 histone acetylt 98.6 1.8E-07 3.9E-12 76.1 8.9 79 84-166 412-508 (522)
62 PF14542 Acetyltransf_CG: GCN5 98.6 6.6E-07 1.4E-11 54.7 9.0 54 88-147 4-57 (78)
63 PF08444 Gly_acyl_tr_C: Aralky 98.5 1.8E-07 3.9E-12 58.0 4.6 66 90-164 5-70 (89)
64 PF13718 GNAT_acetyltr_2: GNAT 98.5 1.8E-06 3.8E-11 61.7 9.5 71 70-141 14-120 (196)
65 KOG4144 Arylalkylamine N-acety 98.5 1.7E-07 3.7E-12 63.5 3.8 122 42-166 10-153 (190)
66 PF12568 DUF3749: Acetyltransf 98.4 1.3E-05 2.7E-10 53.0 11.3 65 80-152 35-99 (128)
67 COG2388 Predicted acetyltransf 98.4 2.7E-06 5.8E-11 54.1 7.1 64 81-149 13-76 (99)
68 COG5628 Predicted acetyltransf 98.3 7.7E-06 1.7E-10 53.2 8.2 70 92-166 45-115 (143)
69 PF12746 GNAT_acetyltran: GNAT 98.2 1.5E-05 3.3E-10 59.6 9.4 109 44-165 129-238 (265)
70 PF04958 AstA: Arginine N-succ 98.1 4.6E-05 1E-09 58.8 10.9 96 43-138 1-148 (342)
71 PF13480 Acetyltransf_6: Acety 98.1 0.00016 3.5E-09 48.4 12.7 104 44-153 20-135 (142)
72 PRK10456 arginine succinyltran 98.0 0.00012 2.7E-09 56.4 10.8 94 43-136 1-144 (344)
73 KOG4135 Predicted phosphogluco 97.9 5.2E-05 1.1E-09 51.3 6.5 123 44-166 14-162 (185)
74 COG3818 Predicted acetyltransf 97.9 6E-05 1.3E-09 49.9 5.9 116 43-163 7-137 (167)
75 COG0454 WecD Histone acetyltra 97.9 1.7E-05 3.6E-10 50.2 3.4 30 117-147 87-116 (156)
76 COG3053 CitC Citrate lyase syn 97.8 0.00045 9.7E-09 51.9 10.4 99 44-158 4-102 (352)
77 PF01233 NMT: Myristoyl-CoA:pr 97.8 0.0046 1E-07 42.6 14.2 112 36-151 19-149 (162)
78 COG1444 Predicted P-loop ATPas 97.8 0.00035 7.5E-09 59.1 10.4 72 71-142 458-562 (758)
79 COG3375 Uncharacterized conser 97.7 0.00092 2E-08 48.4 10.0 113 45-158 4-120 (266)
80 COG4552 Eis Predicted acetyltr 97.6 0.00035 7.5E-09 53.8 8.0 77 83-166 39-119 (389)
81 TIGR03244 arg_catab_AstA argin 97.5 0.0014 3E-08 50.6 10.1 91 46-136 2-142 (336)
82 TIGR03245 arg_AOST_alph argini 97.5 0.0015 3.2E-08 50.4 10.0 91 46-136 2-143 (336)
83 TIGR03243 arg_catab_AOST argin 97.5 0.0019 4E-08 49.8 10.0 91 46-136 2-142 (335)
84 PF06852 DUF1248: Protein of u 97.4 0.0042 9.1E-08 44.0 10.7 114 47-166 8-128 (181)
85 PF05301 Mec-17: Touch recepto 97.4 0.0015 3.2E-08 42.8 7.6 79 82-164 3-95 (120)
86 PF13880 Acetyltransf_13: ESCO 97.3 0.00036 7.7E-09 41.4 3.7 30 111-140 5-34 (70)
87 TIGR03694 exosort_acyl putativ 96.9 0.019 4E-07 42.7 10.2 111 44-155 8-182 (241)
88 cd04264 DUF619-NAGS DUF619 dom 96.9 0.0076 1.7E-07 38.4 6.9 60 92-158 16-75 (99)
89 PF09390 DUF1999: Protein of u 96.9 0.042 9E-07 37.1 10.5 110 44-156 1-126 (161)
90 PF04768 DUF619: Protein of un 96.8 0.074 1.6E-06 37.4 12.2 105 49-164 28-134 (170)
91 PF00765 Autoind_synth: Autoin 96.7 0.021 4.6E-07 40.6 8.9 105 49-155 5-139 (182)
92 PRK13834 putative autoinducer 96.7 0.029 6.4E-07 40.7 9.5 106 49-155 13-149 (207)
93 TIGR03019 pepcterm_femAB FemAB 96.5 0.065 1.4E-06 41.5 11.1 108 44-158 152-265 (330)
94 COG5630 ARG2 Acetylglutamate s 96.5 0.014 3E-07 45.6 7.0 103 52-164 345-448 (495)
95 cd04265 DUF619-NAGS-U DUF619 d 96.5 0.019 4.2E-07 36.6 6.6 58 93-158 18-75 (99)
96 COG3138 AstA Arginine/ornithin 96.4 0.024 5.3E-07 42.6 7.7 92 43-134 1-142 (336)
97 PF01853 MOZ_SAS: MOZ/SAS fami 96.2 0.024 5.3E-07 40.2 6.5 48 94-145 66-113 (188)
98 KOG3698 Hyaluronoglucosaminida 96.1 0.027 5.8E-07 46.4 7.2 144 22-166 656-870 (891)
99 COG3882 FkbH Predicted enzyme 96.0 0.045 9.7E-07 44.3 7.8 119 43-166 413-542 (574)
100 PF04377 ATE_C: Arginine-tRNA- 95.9 0.28 6E-06 32.8 10.1 81 71-156 25-106 (128)
101 PF09924 DUF2156: Uncharacteri 95.9 0.22 4.7E-06 38.1 10.9 106 44-153 133-246 (299)
102 PLN03238 probable histone acet 95.7 0.04 8.7E-07 41.6 6.1 50 92-145 139-188 (290)
103 COG3916 LasI N-acyl-L-homoseri 95.5 0.26 5.6E-06 35.6 9.3 108 47-155 10-147 (209)
104 KOG4601 Uncharacterized conser 95.5 0.14 3.1E-06 37.4 8.0 65 75-139 59-136 (264)
105 PTZ00064 histone acetyltransfe 95.3 0.044 9.5E-07 44.4 5.4 49 93-145 369-417 (552)
106 PLN03239 histone acetyltransfe 95.1 0.07 1.5E-06 41.4 5.7 49 93-145 198-246 (351)
107 PLN00104 MYST -like histone ac 94.7 0.049 1.1E-06 43.8 4.1 49 93-145 291-339 (450)
108 PF02799 NMT_C: Myristoyl-CoA: 94.7 1.1 2.4E-05 32.0 12.3 117 36-158 21-152 (190)
109 PRK01305 arginyl-tRNA-protein 94.0 1.9 4.1E-05 32.1 12.6 82 71-157 130-212 (240)
110 KOG2779 N-myristoyl transferas 93.5 1.3 2.8E-05 34.7 9.5 102 44-146 81-201 (421)
111 KOG2747 Histone acetyltransfer 93.4 0.14 3.1E-06 40.4 4.4 30 113-142 262-291 (396)
112 COG2401 ABC-type ATPase fused 93.0 0.08 1.7E-06 42.5 2.5 37 112-149 242-278 (593)
113 KOG2696 Histone acetyltransfer 93.0 0.24 5.2E-06 38.7 5.0 42 111-154 217-258 (403)
114 COG1243 ELP3 Histone acetyltra 92.3 0.16 3.4E-06 41.0 3.3 43 120-166 459-501 (515)
115 KOG2036 Predicted P-loop ATPas 92.2 0.16 3.4E-06 43.2 3.3 31 112-142 615-645 (1011)
116 PF13444 Acetyltransf_5: Acety 91.9 0.49 1.1E-05 30.0 4.8 23 111-133 78-100 (101)
117 PF04339 DUF482: Protein of un 90.3 4.8 0.0001 32.0 9.7 106 49-161 210-322 (370)
118 KOG2535 RNA polymerase II elon 90.2 0.34 7.4E-06 37.8 3.2 33 121-153 497-529 (554)
119 PRK14852 hypothetical protein; 88.5 2.4 5.3E-05 37.8 7.5 117 44-165 29-171 (989)
120 PHA00432 internal virion prote 87.9 6.4 0.00014 26.6 7.6 102 45-165 2-112 (137)
121 COG5027 SAS2 Histone acetyltra 87.8 0.27 5.9E-06 38.2 1.2 44 95-141 249-292 (395)
122 PRK04531 acetylglutamate kinas 87.6 4.6 0.0001 32.4 8.1 97 50-164 260-356 (398)
123 PHA01733 hypothetical protein 86.0 1.5 3.2E-05 30.2 3.9 115 45-165 4-123 (153)
124 cd04266 DUF619-NAGS-FABP DUF61 84.9 5.9 0.00013 25.7 6.1 43 110-158 38-82 (108)
125 PRK02983 lysS lysyl-tRNA synth 84.9 14 0.0003 33.9 10.3 65 85-155 422-487 (1094)
126 COG2935 Putative arginyl-tRNA: 84.9 7.5 0.00016 29.0 7.3 61 92-157 159-219 (253)
127 COG5653 Protein involved in ce 83.7 21 0.00046 28.7 11.1 86 64-155 249-338 (406)
128 KOG3014 Protein involved in es 83.6 8.2 0.00018 28.8 7.1 32 110-141 182-213 (257)
129 KOG2779 N-myristoyl transferas 83.0 6.9 0.00015 30.8 6.7 116 37-158 254-384 (421)
130 COG5092 NMT1 N-myristoyl trans 80.8 25 0.00054 27.4 9.1 97 45-142 83-196 (451)
131 cd03173 DUF619-like DUF619 dom 79.4 13 0.00029 23.6 6.7 47 111-164 33-79 (98)
132 PF02474 NodA: Nodulation prot 78.6 3.3 7.2E-05 29.2 3.4 104 49-155 15-127 (196)
133 PF10530 Toxin_35: Toxin with 68.9 2.3 4.9E-05 19.3 0.5 10 1-10 2-11 (23)
134 PRK00756 acyltransferase NodA; 68.0 9.1 0.0002 26.9 3.5 46 108-155 82-127 (196)
135 COG2898 Uncharacterized conser 67.8 40 0.00087 28.3 7.7 63 89-155 398-460 (538)
136 PF07395 Mig-14: Mig-14; Inte 67.7 7.9 0.00017 29.2 3.4 55 91-146 180-238 (264)
137 PRK15312 antimicrobial resista 61.9 6.7 0.00014 30.1 2.1 96 46-142 160-265 (298)
138 PF11039 DUF2824: Protein of u 58.2 55 0.0012 22.1 9.0 65 83-153 37-101 (151)
139 PF11124 Pho86: Inorganic phos 56.6 92 0.002 24.2 7.5 57 85-142 171-230 (304)
140 PF06559 DCD: 2'-deoxycytidine 56.3 7.5 0.00016 30.4 1.6 39 85-128 318-356 (364)
141 cd04263 DUF619-NAGK-FABP DUF61 53.2 57 0.0012 20.7 6.9 47 111-164 33-79 (98)
142 PF03376 Adeno_E3B: Adenovirus 48.9 8.6 0.00019 22.3 0.7 13 120-132 53-65 (67)
143 PF02388 FemAB: FemAB family; 48.9 1.3E+02 0.0028 24.2 7.7 66 83-151 35-102 (406)
144 PF04339 DUF482: Protein of un 46.8 1.2E+02 0.0026 24.3 7.0 37 116-153 105-141 (370)
145 PF12652 CotJB: CotJB protein; 45.4 3.8 8.2E-05 24.9 -1.2 34 131-165 3-36 (78)
146 PF04555 XhoI: Restriction end 45.0 80 0.0017 22.7 5.1 42 116-158 144-185 (196)
147 COG3543 Uncharacterized conser 41.6 33 0.00072 23.0 2.7 42 115-156 8-49 (135)
148 PF00571 CBS: CBS domain CBS d 41.3 57 0.0012 17.4 3.4 18 82-100 30-47 (57)
149 COG5092 NMT1 N-myristoyl trans 39.6 93 0.002 24.4 5.2 114 44-158 259-401 (451)
150 PF02388 FemAB: FemAB family; 39.3 2E+02 0.0044 23.1 8.0 56 92-152 301-356 (406)
151 PF01751 Toprim: Toprim domain 39.2 31 0.00068 21.5 2.3 36 115-152 63-98 (100)
152 PF09227 DUF1962: Domain of un 38.1 17 0.00036 20.5 0.8 15 6-20 37-51 (64)
153 COG4353 Uncharacterized conser 36.6 1.4E+02 0.0031 20.9 5.2 69 92-165 37-105 (192)
154 cd01027 TOPRIM_RNase_M5_like T 32.2 38 0.00082 20.5 1.8 24 115-138 48-71 (81)
155 COG0375 HybF Zn finger protein 30.3 1.4E+02 0.003 19.6 4.2 26 127-153 5-33 (115)
156 COG1658 Small primase-like pro 29.2 44 0.00096 22.3 1.8 22 117-138 60-81 (127)
157 PF12953 DUF3842: Domain of un 28.6 60 0.0013 21.8 2.3 21 122-142 6-26 (131)
158 PRK03681 hypA hydrogenase nick 28.0 85 0.0018 20.4 3.0 27 126-153 4-33 (114)
159 COG2994 HlyC ACP:hemolysin acy 27.2 1E+02 0.0022 21.1 3.2 71 84-162 53-141 (148)
160 KOG0538 Glycolate oxidase [Ene 26.9 2.2E+02 0.0047 22.4 5.3 36 112-155 122-157 (363)
161 COG4866 Uncharacterized conser 25.2 3.1E+02 0.0067 20.9 5.7 78 44-125 152-241 (294)
162 PF12261 T_hemolysin: Thermost 24.4 1.7E+02 0.0038 20.8 4.2 37 112-153 88-124 (179)
163 TIGR03527 selenium_YedF seleni 23.5 2.3E+02 0.005 20.4 4.8 35 116-151 87-126 (194)
164 TIGR00100 hypA hydrogenase nic 23.4 1.1E+02 0.0024 19.8 2.9 27 126-153 4-33 (115)
165 PHA02448 hypothetical protein 22.6 48 0.001 22.3 1.1 11 8-18 68-78 (192)
166 PF02268 TFIIA_gamma_N: Transc 22.0 1.5E+02 0.0033 16.2 2.8 21 122-142 5-25 (49)
167 PRK00762 hypA hydrogenase nick 22.0 1.3E+02 0.0028 19.8 3.1 24 126-150 4-27 (124)
168 PF01830 Peptidase_C7: Peptida 21.9 1.9E+02 0.0041 21.0 3.9 31 112-142 211-241 (243)
169 PRK12380 hydrogenase nickel in 21.7 1.3E+02 0.0028 19.5 3.0 27 126-153 4-33 (113)
170 PF06557 DUF1122: Protein of u 21.5 3E+02 0.0065 19.4 6.2 68 92-164 26-97 (170)
171 PF02334 RTP: Replication term 21.3 28 0.0006 22.7 -0.2 23 123-146 28-50 (122)
172 KOG1669 Predicted mRNA cap-bin 21.2 41 0.00088 23.9 0.5 9 5-13 102-110 (208)
173 PF08348 PAS_6: YheO-like PAS 20.9 1.9E+02 0.0041 18.9 3.6 20 85-104 86-105 (118)
174 TIGR03827 GNAT_ablB putative b 20.7 1.2E+02 0.0027 22.6 3.1 30 127-157 21-50 (266)
175 PF12162 STAT1_TAZ2bind: STAT1 20.3 64 0.0014 14.6 0.9 15 46-60 7-21 (23)
No 1
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.85 E-value=2.4e-20 Score=127.28 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=97.2
Q ss_pred ceeEEEEcccccHHHHHHHHhhhcCCCcchHH----HHHHhccCCCeEEEEEcCCCeEEEEEEEEEecC--CCceeEEEe
Q 031082 42 KMTTIRRFCCNDLLRFTSVNLDHLTETFNMSF----YMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQ--GESWHGHVT 115 (166)
Q Consensus 42 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~--~~~~~~~i~ 115 (166)
+++.||+++++|++.+.++........+.... +.+.+..+...++++. .++++||++.+..... ...+.++|.
T Consensus 2 ~~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~-~~~~ivG~~~~~~~~~~~~~~~~~~i~ 80 (144)
T PRK10146 2 PACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLAL-LDGEVVGMIGLHLQFHLHHVNWIGEIQ 80 (144)
T ss_pred CccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEE-ECCEEEEEEEEEecccccccchhheeh
Confidence 35789999999999999998766554444222 3334444445567777 4899999997754321 222346789
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++|+|+|||+|+|+.|++.+++.+++ .|+..+.|++...|.+|++||+|
T Consensus 81 ~l~v~p~~rg~GiG~~Ll~~~~~~a~~-~~~~~i~l~~~~~n~~a~~fY~~ 130 (144)
T PRK10146 81 ELVVMPQARGLNVGSKLLAWAEEEARQ-AGAEMTELSTNVKRHDAHRFYLR 130 (144)
T ss_pred eeEECHHHcCCCHHHHHHHHHHHHHHH-cCCcEEEEecCCCchHHHHHHHH
Confidence 999999999999999999999999999 99999999999999999999985
No 2
>PRK03624 putative acetyltransferase; Provisional
Probab=99.78 E-value=8.8e-18 Score=113.45 Aligned_cols=118 Identities=23% Similarity=0.295 Sum_probs=93.4
Q ss_pred eeEEEEcccccHHHHHHHHhhhcC-CCcch--HHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEe
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLT-ETFNM--SFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTV 119 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~-~~~~~--~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V 119 (166)
++.||+++.+|++++.++...... .+|.. ..+...+......++++. .++++||++.+..... ..++..++|
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~vG~~~~~~~~~----~~~i~~i~v 76 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAE-VGGEVVGTVMGGYDGH----RGWAYYLAV 76 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEE-cCCcEEEEEEeeccCC----CceEEEEEE
Confidence 478999999999999999876521 23321 223334444445677777 4899999997654332 256788999
Q ss_pred CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 120 SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|+|||+|+|++|++.+++.+++ .+++.+.+.+.+.|.++++||+|
T Consensus 77 ~p~~rg~Gig~~ll~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~y~k 122 (140)
T PRK03624 77 HPDFRGRGIGRALVARLEKKLIA-RGCPKINLQVREDNDAVLGFYEA 122 (140)
T ss_pred CHHHhCCCHHHHHHHHHHHHHHH-CCCCEEEEEEecCcHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999975
No 3
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.77 E-value=1.1e-17 Score=113.08 Aligned_cols=121 Identities=21% Similarity=0.307 Sum_probs=98.8
Q ss_pred EEEEc---ccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCc
Q 031082 45 TIRRF---CCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSP 121 (166)
Q Consensus 45 ~ir~~---~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p 121 (166)
.|+.. .+..++.+.++....++++++...+.....+.+..++++.|.++..||.+............++|..++|++
T Consensus 15 ~i~~~~~~~~~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~ 94 (165)
T KOG3139|consen 15 VIRPSLYPAEEYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDS 94 (165)
T ss_pred eeeeecchHHHHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEech
Confidence 45554 344556677888888888887666666666777888888853333799997766655444569999999999
Q ss_pred chhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 122 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|||+|||++|++.+++.+++ .|+..+.|++...|.+|.+||++
T Consensus 95 e~Rg~GIg~aLvr~aId~m~~-~g~~eVvLeTe~~n~~A~~LY~s 138 (165)
T KOG3139|consen 95 EYRGQGIGKALVRKAIDAMRS-RGYSEVVLETEVTNLSALRLYES 138 (165)
T ss_pred hhccccHHHHHHHHHHHHHHH-CCCcEEEEeccccchHHHHHHHh
Confidence 999999999999999999999 99999999999999999999985
No 4
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.76 E-value=4.2e-18 Score=114.60 Aligned_cols=122 Identities=37% Similarity=0.582 Sum_probs=110.9
Q ss_pred eEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEec--CCCceeEEEeEEEeCc
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEG--QGESWHGHVTAVTVSP 121 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~--~~~~~~~~i~~l~V~p 121 (166)
+.||.++.+|+-.+......+.+++|..+++......+++..||++|.+|+||||+....+. ++....++|..++|..
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~r 81 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKR 81 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehh
Confidence 57999999999999999999999999999999999999999999998899999999876554 3444578999999999
Q ss_pred chhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 122 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
.||+.|||++||........+-.+...+.|.|+.+|.+|+.||+
T Consensus 82 s~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~ 125 (193)
T KOG3235|consen 82 SYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYK 125 (193)
T ss_pred hHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhh
Confidence 99999999999999988888767889999999999999999996
No 5
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.75 E-value=2.1e-17 Score=114.77 Aligned_cols=119 Identities=19% Similarity=0.212 Sum_probs=89.8
Q ss_pred EEEcccccHHHHHHHHhhhcCCCcch-HHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchh
Q 031082 46 IRRFCCNDLLRFTSVNLDHLTETFNM-SFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYR 124 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r 124 (166)
||+++.+|++++.+|........... ..+..........++++.+.++++||++.+..... .....++..++|+|+||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~-~~~~~~i~~l~V~p~~r 79 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPD-RPDVLFVWQVAVDPRAR 79 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCC-CCCeEEEEEEEEChHhc
Confidence 57899999999999997764322111 11112222233456677644789999986543332 22236788999999999
Q ss_pred cccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 125 RQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 125 g~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|+|+|++|++.+++++++ .++..+.+.|.+.|.+|++||+|
T Consensus 80 g~GiG~~L~~~l~~~a~~-~~~~~i~~~v~~~N~~a~~ly~k 120 (157)
T TIGR02406 80 GKGLARRLLEALLERVAC-ERVRHLETTITPDNQASRALFKA 120 (157)
T ss_pred cCcHHHHHHHHHHHHHHh-CCCCEEEEEEcCCCHHHHHHHHH
Confidence 999999999999999999 89999999999999999999986
No 6
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=3.5e-17 Score=109.64 Aligned_cols=122 Identities=16% Similarity=0.075 Sum_probs=92.2
Q ss_pred eEEEEcccccHHHHHHHHhhhcC-------CCcchHHHHH--HhccCCCeEEEEE--cCCCeEEEEEEEEEec--CCCce
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLT-------ETFNMSFYMT--YLARWPDYFHVAE--GPGNRIMGYIMGKVEG--QGESW 110 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~-------~~~~~~~~~~--~~~~~~~~~~v~~--~~~~~ivG~~~~~~~~--~~~~~ 110 (166)
+.||.++++|.+.+..|+.+... ..-+...+.. .++.+-..++++. ..++.++|++++...- .....
T Consensus 4 ~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k~ 83 (163)
T KOG3216|consen 4 IRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGKQ 83 (163)
T ss_pred eEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccccccccc
Confidence 68999999999999999865432 1111222332 2333334454443 1378899999764332 22223
Q ss_pred eEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 111 HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 111 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
..++.+++|.|+|||+|+|++|++.+.+.|.+ .|+.++.+-|...|.+|+.||+|
T Consensus 84 ~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~-~G~~rv~w~vldwN~rAi~lY~k 138 (163)
T KOG3216|consen 84 GIYLEDLYVREQYRGKGIGSKLLKFVAEEADK-LGTPRVEWVVLDWNHRAILLYEK 138 (163)
T ss_pred eEEEEeeEecchhcccChHHHHHHHHHHHHHH-cCCCcEEEEEeccchhHHHHHHH
Confidence 47999999999999999999999999999999 99999999999999999999985
No 7
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.75 E-value=3.5e-18 Score=114.80 Aligned_cols=122 Identities=63% Similarity=1.034 Sum_probs=114.8
Q ss_pred eEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcch
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEY 123 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 123 (166)
.++|+++.+|+-...++......+.++..|+..++...++.+.+++..+++|.|+++...++.+..|++++..+.|.|+|
T Consensus 2 tt~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~ 81 (173)
T KOG3234|consen 2 TTIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDY 81 (173)
T ss_pred CccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhH
Confidence 46899999999988888888888999999999999999999999998889999999999999999999999999999999
Q ss_pred hcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 124 RRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 124 rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|+.|+|+.||..+++.... .+.-.+.|.|...|+-|+.+|+|
T Consensus 82 Rrl~la~~lm~~led~~d~-~~a~fvDLfVr~sN~iAI~mYkk 123 (173)
T KOG3234|consen 82 RRLGLAAKLMDTLEDVSDV-DNAYFVDLFVRVSNQIAIDMYKK 123 (173)
T ss_pred HHHHHHHHHHHHHHHHHHh-hhhheeeeeeeccchhHHHHHHh
Confidence 9999999999999999999 78889999999999999999986
No 8
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.75 E-value=4.8e-17 Score=111.42 Aligned_cols=117 Identities=21% Similarity=0.203 Sum_probs=92.1
Q ss_pred eeEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcc
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPE 122 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 122 (166)
|+.||+++.+|++.+..+.......+|....+.... ......+.+. .++++||++.+..... ...+..++|+|+
T Consensus 1 ~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~vG~~~~~~~~~----~~~~~~i~v~~~ 74 (146)
T PRK09491 1 MNTISSLTPADLPAAYHIEQRAHAFPWSEKTFASNQ-GERYLNLKLT-VNGQMAAFAITQVVLD----EATLFNIAVDPD 74 (146)
T ss_pred CcchhcCChhhhHHHHHHHHhcCCCCCCHHHHHHHH-hcCceEEEEE-ECCeEEEEEEEEeecC----ceEEEEEEECHH
Confidence 467999999999999999876665566554433321 1222233445 4899999997755433 256788999999
Q ss_pred hhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 123 YRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 123 ~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|||+|+|+.+++.+++.+++ .++..+.+.+...|.+|++||+|
T Consensus 75 ~rg~G~g~~ll~~~~~~~~~-~~~~~~~~~~~~~N~~a~~~y~k 117 (146)
T PRK09491 75 YQRQGLGRALLEHLIDELEK-RGVATLWLEVRASNAAAIALYES 117 (146)
T ss_pred HccCCHHHHHHHHHHHHHHH-CCCcEEEEEEccCCHHHHHHHHH
Confidence 99999999999999999988 99999999999999999999986
No 9
>PTZ00330 acetyltransferase; Provisional
Probab=99.74 E-value=9.9e-17 Score=109.69 Aligned_cols=119 Identities=24% Similarity=0.237 Sum_probs=86.7
Q ss_pred eeEEEEcccccHHHHHHHHhhhcCCC-cchHHHHHHhcc----CC-CeEEEEEcCCCeEEEEEEEEEecC---CCceeEE
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLTET-FNMSFYMTYLAR----WP-DYFHVAEGPGNRIMGYIMGKVEGQ---GESWHGH 113 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~~~-~~~~~~~~~~~~----~~-~~~~v~~~~~~~ivG~~~~~~~~~---~~~~~~~ 113 (166)
.+.||+++++|++++.++.......+ .....+...... .. ..++++. .+|++||++.+..... ......+
T Consensus 6 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~ 84 (147)
T PTZ00330 6 SLELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHS-PTQRIVGTASLFVEPKFTRGGKCVGH 84 (147)
T ss_pred eEEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEe-CCCEEEEEEEEEeccccccCCCceEE
Confidence 47899999999999999986654422 233222222211 11 2345555 5899999997654322 1112367
Q ss_pred EeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 114 VTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 114 i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|..++|+|+|||+|||++|++++++++++ .++..+.+.+ |.+|++||+|
T Consensus 85 i~~~~V~~~~rg~Gig~~l~~~~~~~a~~-~~~~~l~l~~---n~~a~~~y~k 133 (147)
T PTZ00330 85 IEDVVVDPSYRGQGLGRALISDLCEIARS-SGCYKVILDC---TEDMVAFYKK 133 (147)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEec---ChHHHHHHHH
Confidence 89999999999999999999999999999 9998887764 7899999985
No 10
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.74 E-value=4.7e-17 Score=114.50 Aligned_cols=124 Identities=23% Similarity=0.363 Sum_probs=103.5
Q ss_pred ceeEEEEcccccHH--HHHHHHhhhcC--CCcchHHHHHHhccCCCeEEEEEcC--CC----eEEEEEEEEEecCCC--c
Q 031082 42 KMTTIRRFCCNDLL--RFTSVNLDHLT--ETFNMSFYMTYLARWPDYFHVAEGP--GN----RIMGYIMGKVEGQGE--S 109 (166)
Q Consensus 42 ~~~~ir~~~~~D~~--~i~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~--~~----~ivG~~~~~~~~~~~--~ 109 (166)
.++.++.+...|+. .+.++....+. .+|+...+...+...+..++++... ++ +++|++......... .
T Consensus 10 ~~~~ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 89 (177)
T COG0456 10 DKVTIREAINKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRPSAD 89 (177)
T ss_pred cceehhhhhhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCcccc
Confidence 34679999999999 88888888888 6889899999998888888888731 23 599999775332211 1
Q ss_pred eeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCc-EEEEEEeecCChhhhhcccC
Q 031082 110 WHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKA-YFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 110 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~-~~i~l~v~~~N~~a~~~Y~k 166 (166)
..++|..++|+|+|||+|||++|++.+++.+++ .+. ..+.|+|..+|.+|++||+|
T Consensus 90 ~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~-~~~~~~~~L~V~~~N~~Ai~lY~~ 146 (177)
T COG0456 90 HEGHIYNLAVDPEYRGRGIGRALLDEALERLRE-RGLADKIVLEVRESNEAAIGLYRK 146 (177)
T ss_pred CccEEEEEEEChHhhcCCHHHHHHHHHHHHHHh-cCCCceEEEEEecCChHHHHHHHH
Confidence 137899999999999999999999999999999 886 89999999999999999986
No 11
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.74 E-value=6.7e-17 Score=115.66 Aligned_cols=119 Identities=11% Similarity=0.107 Sum_probs=90.4
Q ss_pred eEEEEcccccHHHHHHHHhhhcC-----CCcc-h----HHHHH----HhccC-CCeEEEEEcCCCeEEEEEEEEEecCCC
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLT-----ETFN-M----SFYMT----YLARW-PDYFHVAEGPGNRIMGYIMGKVEGQGE 108 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~-----~~~~-~----~~~~~----~~~~~-~~~~~v~~~~~~~ivG~~~~~~~~~~~ 108 (166)
+.||+++++|++.+.++....+. .+|. . .++.. ..... ....+++...+|++||++.+......
T Consensus 44 ~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~~~- 122 (191)
T TIGR02382 44 PGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELNDT- 122 (191)
T ss_pred CcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecCCC-
Confidence 57999999999999999877643 1221 1 11222 11122 22334333258899999987654433
Q ss_pred ceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 109 SWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 109 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++|..++|+|++||+|+|++|++++++++++ .|+.++.+.|...|.+|++||+|
T Consensus 123 --~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~-~g~~~I~l~v~~~N~~A~~~Y~k 177 (191)
T TIGR02382 123 --DARIGLLAVFPGAQSRGIGAELMQTALNWCYA-RGLTRLRVATQMGNTAALRLYIR 177 (191)
T ss_pred --ceEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHHH
Confidence 26789999999999999999999999999998 99999999999999999999986
No 12
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.74 E-value=7.9e-17 Score=131.35 Aligned_cols=125 Identities=18% Similarity=0.210 Sum_probs=99.9
Q ss_pred CceeEEEEc-ccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEc-CCCeEEEEEEEEEec---CCCceeEEEe
Q 031082 41 RKMTTIRRF-CCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEG-PGNRIMGYIMGKVEG---QGESWHGHVT 115 (166)
Q Consensus 41 ~~~~~ir~~-~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~ivG~~~~~~~~---~~~~~~~~i~ 115 (166)
...+.||++ +.+|++++.+|.......++....+...+......++++++ .+|++||++.+.... .+.....++.
T Consensus 80 ~~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~ 159 (547)
T TIGR03103 80 PRGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLW 159 (547)
T ss_pred CCCcEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEE
Confidence 344889997 68999999999988766566666655555444556777774 368999999653211 1222236789
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.|+|+|+|||+|||++|++.+++++++ .|+..++|.|..+|.+|++||+|
T Consensus 160 ~l~V~P~~Rg~GIG~~Ll~~l~e~a~~-~G~~~i~L~V~~~N~~Ai~fY~k 209 (547)
T TIGR03103 160 CLAVDPQAAHPGVGEALVRALAEHFQS-RGCAYMDLSVMHDNEQAIALYEK 209 (547)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEcCCCHHHHHHHHH
Confidence 999999999999999999999999999 99999999999999999999986
No 13
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.73 E-value=1.7e-16 Score=110.08 Aligned_cols=122 Identities=18% Similarity=0.147 Sum_probs=89.9
Q ss_pred eEEEEcccccHHHHHHHHhhhc--C-----CCcchHHHHHHhcc-CCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEe
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHL--T-----ETFNMSFYMTYLAR-WPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVT 115 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~--~-----~~~~~~~~~~~~~~-~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~ 115 (166)
+.||+++.+|++.+.++..... . .......+...+.. ....++++. .+|++||++.+..............
T Consensus 4 i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~vG~~~~~~~~~~~~~~~~~~ 82 (162)
T PRK10140 4 IVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVAC-IDGDVVGHLTIDVQQRPRRSHVADF 82 (162)
T ss_pred cEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEE-ECCEEEEEEEEecccccccceEEEE
Confidence 7899999999999999986421 1 11222334444433 333567776 4899999997764322111111223
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++|+|+|||+|||+.|++.+++++++..++..+.+.+.+.|.+|++||+|
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k 133 (162)
T PRK10140 83 GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKK 133 (162)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHH
Confidence 589999999999999999999999988559999999999999999999986
No 14
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.73 E-value=1.7e-16 Score=106.04 Aligned_cols=108 Identities=21% Similarity=0.295 Sum_probs=91.5
Q ss_pred cHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHH
Q 031082 53 DLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKL 132 (166)
Q Consensus 53 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~L 132 (166)
|++++.++....++.++....+...+......++++. .++++||++.+..... ...+..++|+|+|||+|+|++|
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vg~~~~~~~~~----~~~i~~~~v~~~~rg~G~g~~l 75 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLAR-IGGKVVGYAGVQIVLD----EAHILNIAVKPEYQGQGIGRAL 75 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEe-cCCeEEEEEEEEecCC----CeEEEEEEECHHHcCCCHHHHH
Confidence 6788899999999988887777777765445566666 4899999998665443 2678999999999999999999
Q ss_pred HHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 133 MNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 133 l~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
++++++++++ .++..+.+.+.+.|.++++||+|
T Consensus 76 l~~~~~~~~~-~~~~~i~~~~~~~n~~~~~~y~~ 108 (131)
T TIGR01575 76 LRELIDEAKG-RGVNEIFLEVRVSNIAAQALYKK 108 (131)
T ss_pred HHHHHHHHHH-cCCCeEEEEEecccHHHHHHHHH
Confidence 9999999999 89999999999999999999975
No 15
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.71 E-value=2.7e-16 Score=118.02 Aligned_cols=121 Identities=16% Similarity=0.155 Sum_probs=96.2
Q ss_pred CceeEEEEcccccHHHHHHHHhhhcCC---Cc-chHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeE
Q 031082 41 RKMTTIRRFCCNDLLRFTSVNLDHLTE---TF-NMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTA 116 (166)
Q Consensus 41 ~~~~~ir~~~~~D~~~i~~l~~~~~~~---~~-~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~ 116 (166)
++.+.||+++++|++++.++....+.. ++ ...++...+. ....++++. .+|++||++.+...... ..++|..
T Consensus 113 ~~~~~IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~-~~~~~~v~~-~~g~iVG~~~~~~~~~~--~~~eI~~ 188 (266)
T TIGR03827 113 PEGFTLRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMK-SNVVYFGVE-DGGKIIALASAEMDPEN--GNAEMTD 188 (266)
T ss_pred CCceEEEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhc-CCcEEEEEE-ECCEEEEEEEEecCCCC--CcEEEEE
Confidence 345889999999999999999887642 11 1234444443 345567777 48999999976433322 2477999
Q ss_pred EEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 117 VTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 117 l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
++|+|+|||+|+|++|++.+++++++ .|+..+++.+...|.+|.++|+|
T Consensus 189 i~V~P~yRG~GiG~~Ll~~l~~~a~~-~g~~~l~~~~~~~n~~a~~ly~k 237 (266)
T TIGR03827 189 FATLPEYRGKGLAKILLAAMEKEMKE-KGIRTAYTIARASSYGMNITFAR 237 (266)
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHH-CCCcEEEeehhhcchhHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999976
No 16
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.71 E-value=3.4e-16 Score=112.22 Aligned_cols=119 Identities=11% Similarity=0.166 Sum_probs=91.2
Q ss_pred eEEEEcccccHHHHHHHHhhhcCC-----Cc-ch----HHHHHHhc----cC-CCeEEEEEcCCCeEEEEEEEEEecCCC
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTE-----TF-NM----SFYMTYLA----RW-PDYFHVAEGPGNRIMGYIMGKVEGQGE 108 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~-----~~-~~----~~~~~~~~----~~-~~~~~v~~~~~~~ivG~~~~~~~~~~~ 108 (166)
..||+++++|++.+.++....+.. +| .. .++...+. .. ...++++.+.+|++||++.+......
T Consensus 47 ~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~~~- 125 (194)
T PRK10975 47 TGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELNDT- 125 (194)
T ss_pred CCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecCCC-
Confidence 568999999999999998765431 22 11 22222221 11 22455555457899999977654333
Q ss_pred ceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 109 SWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 109 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
..+|..++|+|+|||+|+|++|++.+++++++ .|+..+.+.|...|.+|++||+|
T Consensus 126 --~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~~yek 180 (194)
T PRK10975 126 --DARIGLLAVFPGAQGRGIGARLMQAALNWCQA-RGLTRLRVATQMGNLAALRLYIR 180 (194)
T ss_pred --ceEEEEEEEChhhcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeCCCcHHHHHHHHH
Confidence 26788899999999999999999999999999 99999999999999999999986
No 17
>PHA01807 hypothetical protein
Probab=99.70 E-value=2.5e-16 Score=108.48 Aligned_cols=116 Identities=11% Similarity=0.010 Sum_probs=84.0
Q ss_pred cccccHHHHHHHHhhhc---CCC--cc--hH---HHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCC-CceeEEEeEE
Q 031082 49 FCCNDLLRFTSVNLDHL---TET--FN--MS---FYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQG-ESWHGHVTAV 117 (166)
Q Consensus 49 ~~~~D~~~i~~l~~~~~---~~~--~~--~~---~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~-~~~~~~i~~l 117 (166)
++.+|++.+.+|....+ ++. |. .. .+.+.+.......++++ .+|++||++.+...... ......+..|
T Consensus 9 ~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~-~dg~lvG~~~l~~~~~~~~~~i~~l~~l 87 (153)
T PHA01807 9 AKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVF-RDGKLAGIAVLVFEDDPHVGPCLGVQWQ 87 (153)
T ss_pred hhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEE-ECCEEEEEEEEEcCCCcceeeeccceeE
Confidence 66788888888875544 332 32 22 12222333344557777 48999999976544321 1111224457
Q ss_pred EeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 118 TVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 118 ~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|+|+|||+|||++||+.+++++++ .|+..+.++|...|.+|++||++
T Consensus 88 YV~pe~RG~GiG~~Ll~~~~~~Ar~-~G~~~l~l~v~~~n~~a~~~y~~ 135 (153)
T PHA01807 88 YVLPEYRNAGVAREFLRELIRLAGE-GNLPLIAFSHREGEGRYTIHYRR 135 (153)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEecCCcHHHHHHHHh
Confidence 9999999999999999999999999 99999999999999999999984
No 18
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.67 E-value=5.4e-16 Score=96.00 Aligned_cols=77 Identities=25% Similarity=0.309 Sum_probs=68.8
Q ss_pred EEcCCCeEEEEEEEEEecCCC--ceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 88 AEGPGNRIMGYIMGKVEGQGE--SWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 88 ~~~~~~~ivG~~~~~~~~~~~--~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
++ .+|+|||++.+....... ....+|..++|+|+|||+|+|+.|++.+++.+++ .|+..+.+.+.++|.++.+||+
T Consensus 1 ~~-~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~-~g~~~i~~~~~~~n~~~~~~~~ 78 (83)
T PF00583_consen 1 AE-EDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARK-RGIKRIYLDVSPDNPAARRFYE 78 (83)
T ss_dssp EE-ETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHH-TTESEEEEEEETTGHHHHHHHH
T ss_pred Cc-CCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHh-cCccEEEEEEeCCCHHHHHHHH
Confidence 35 489999999887766531 3468999999999999999999999999999999 9999999999999999999997
Q ss_pred C
Q 031082 166 M 166 (166)
Q Consensus 166 k 166 (166)
|
T Consensus 79 k 79 (83)
T PF00583_consen 79 K 79 (83)
T ss_dssp H
T ss_pred H
Confidence 5
No 19
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.67 E-value=3.7e-15 Score=102.40 Aligned_cols=121 Identities=19% Similarity=0.166 Sum_probs=87.1
Q ss_pred ceeEEEEcccccHH-HHHHHHhhhcC-CCcchHHHHHHhc---c-C-CCeEEEEEc-CCCeEEEEEEEEEec---CCCce
Q 031082 42 KMTTIRRFCCNDLL-RFTSVNLDHLT-ETFNMSFYMTYLA---R-W-PDYFHVAEG-PGNRIMGYIMGKVEG---QGESW 110 (166)
Q Consensus 42 ~~~~ir~~~~~D~~-~i~~l~~~~~~-~~~~~~~~~~~~~---~-~-~~~~~v~~~-~~~~ivG~~~~~~~~---~~~~~ 110 (166)
+.+.||+++++|.+ .+..+...... .+++...+...+. . . ....+++.+ .++++||++.+.... .....
T Consensus 5 ~~~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 84 (150)
T PLN02706 5 EKFKVRRLEISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCGK 84 (150)
T ss_pred CceEEeEhhhcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCCc
Confidence 34789999999998 47887765433 3454444444432 1 2 233455552 158999999764321 12223
Q ss_pred eEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 111 HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 111 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++|..++|+|+|||+|||++|++.++++|++ .|+.++.+.+.+.|. +||+|
T Consensus 85 ~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~-~g~~~i~l~~~~~N~---~~y~k 136 (150)
T PLN02706 85 VGHIEDVVVDSAARGKGLGKKIIEALTEHARS-AGCYKVILDCSEENK---AFYEK 136 (150)
T ss_pred EEEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeccccH---HHHHH
Confidence 46788899999999999999999999999999 999999999999985 58875
No 20
>PRK07757 acetyltransferase; Provisional
Probab=99.66 E-value=1.6e-15 Score=104.46 Aligned_cols=114 Identities=16% Similarity=0.101 Sum_probs=83.6
Q ss_pred eeEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcc
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPE 122 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 122 (166)
|+.||+++++|++.+.++........+........+......++++. .+|++||++.+...... ..+|..++|+|+
T Consensus 1 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~lvG~~~l~~~~~~---~~~i~~v~V~p~ 76 (152)
T PRK07757 1 MMEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAE-EEGEIVGCCALHILWED---LAEIRSLAVSED 76 (152)
T ss_pred CceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEE-ECCEEEEEEEEEeccCC---ceEEEEEEECHH
Confidence 46899999999999999986654332211111112222223466777 48999999987655443 267889999999
Q ss_pred hhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 123 YRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 123 ~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|||+|+|++|++.+++.+++ .|+..+.+.+. +.+||+|
T Consensus 77 ~rg~Glg~~Ll~~l~~~a~~-~g~~~i~~~~~-----~~~~Y~k 114 (152)
T PRK07757 77 YRGQGIGRMLVEACLEEARE-LGVKRVFALTY-----QPEFFEK 114 (152)
T ss_pred HcCCCHHHHHHHHHHHHHHh-CCCCeEEEEeC-----cHHHHHH
Confidence 99999999999999999998 89988876553 4578876
No 21
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.66 E-value=3.6e-15 Score=99.59 Aligned_cols=113 Identities=19% Similarity=0.214 Sum_probs=82.9
Q ss_pred EEEEcccccHHHHHHHHhhhcCCCcchHH----HHHHhccCCCeEEEEEcCCCeEEEEEEEEEec----CCCceeEEEeE
Q 031082 45 TIRRFCCNDLLRFTSVNLDHLTETFNMSF----YMTYLARWPDYFHVAEGPGNRIMGYIMGKVEG----QGESWHGHVTA 116 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~----~~~~~~~~i~~ 116 (166)
.||+++++|++++.++...+|+....... ....+ .+..++++++ +|+|||.+.+.... ......+++..
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~ivg~~~~~~~~~~~~g~~~~~~~i~~ 77 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLY--GPGRCVVAED-DGKIVGHVGLIPRRLSVGGKKFKAAYIGD 77 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHH--HTTEEEEEEE-TTEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhccc--CcCcEEEEEE-CCEEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 48999999999999999999987665531 22222 2467888885 99999999664331 22234588999
Q ss_pred EEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 117 VTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 117 l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
++|+|+|||+|+|++|++++++.+++ .|+..+.+.. ....||+|
T Consensus 78 v~v~p~~R~~Gl~~~L~~~~~~~~~~-~g~~~~~l~~-----~~~~~Y~~ 121 (127)
T PF13527_consen 78 VAVDPEYRGRGLGRQLMRALLERARE-RGVPFIFLFP-----SSPPFYRR 121 (127)
T ss_dssp EEE-GGGTTSSHHHHHHHHHHHHHHH-TT-SEEEEE------SSHHHHHH
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHh-CCCCEEEEec-----CChhhhhc
Confidence 99999999999999999999999999 8998777765 23567753
No 22
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.66 E-value=3e-15 Score=105.14 Aligned_cols=114 Identities=16% Similarity=0.109 Sum_probs=84.3
Q ss_pred eeEEEEcccccHHHHHHHHhhhcCCCc-chHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCc
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLTETF-NMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSP 121 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p 121 (166)
++.||+++++|.+++.++......... ........+.. ...++++.+.++++||++.+.....+ ...|..++|+|
T Consensus 5 ~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~va~~~~~~iiG~~~~~~~~~~---~~~i~~l~V~p 80 (169)
T PRK07922 5 AITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEA-VQEFWVAEHLDGEVVGCGALHVMWED---LAEIRTVAVDP 80 (169)
T ss_pred CceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhh-cCcEEEEEecCCcEEEEEEEeecCCC---ceEEEEEEECH
Confidence 478999999999999999866443211 11112222222 34566776248899999976554332 26788999999
Q ss_pred chhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 122 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|||+|+|++|++++++++++ .|+..+.+.+. +++||+|
T Consensus 81 ~~rgkGiG~~Ll~~~~~~a~~-~g~~~l~~~~~-----~~~fY~k 119 (169)
T PRK07922 81 AARGRGVGHAIVERLLDVARE-LGLSRVFVLTF-----EVEFFAR 119 (169)
T ss_pred HHhCCCHHHHHHHHHHHHHHH-cCCCEEEEEec-----cHHHHHH
Confidence 999999999999999999999 99999987664 3678876
No 23
>PHA00673 acetyltransferase domain containing protein
Probab=99.65 E-value=5.8e-15 Score=101.05 Aligned_cols=116 Identities=13% Similarity=0.025 Sum_probs=88.2
Q ss_pred EcccccHHHHHHHHhhhcC-----CCcc----hHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecC---CCceeEEEe
Q 031082 48 RFCCNDLLRFTSVNLDHLT-----ETFN----MSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQ---GESWHGHVT 115 (166)
Q Consensus 48 ~~~~~D~~~i~~l~~~~~~-----~~~~----~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~---~~~~~~~i~ 115 (166)
.++.+|+++|.+|..+.-. .... ...+.....++...++++++ +|++||++.+...+. ...+.++|.
T Consensus 11 ~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~-~g~vVG~~~l~~~p~l~~~~~~~~~Ie 89 (154)
T PHA00673 11 FAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFR-GEELVGFACLLVTPVPHFKGQLIGTTE 89 (154)
T ss_pred hccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEE-CCEEEEEEEEEEecCCccCCccEEEEE
Confidence 4789999999999865211 0000 11144455566677888884 899999997766653 233557899
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.+.|+|++||+|||++|++++++++++ .|+..+++...++. ..+.||.+
T Consensus 90 ~l~V~~~~RGqGIG~~Ll~~A~~~Ar~-~Gc~~lyis~~p~~-~tv~fy~~ 138 (154)
T PHA00673 90 SIFVAAAHRPGGAGMALLRATEALARD-LGATGLYVSGPTEG-RLVQLLPA 138 (154)
T ss_pred EEEEChhccCCCHHHHHHHHHHHHHHH-CCCCEEEEecCCCc-cchHHHHh
Confidence 999999999999999999999999999 99999999866543 57888854
No 24
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.63 E-value=8.8e-15 Score=100.90 Aligned_cols=118 Identities=19% Similarity=0.175 Sum_probs=82.5
Q ss_pred EEEcccccHHHHHHHHhhhc----CCC----cchHH----HHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEE
Q 031082 46 IRRFCCNDLLRFTSVNLDHL----TET----FNMSF----YMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGH 113 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~----~~~----~~~~~----~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 113 (166)
||+++++|++++..+..... ... ..... +...........+++...+|++||++.+..... .. ...
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~-~~-~~~ 78 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDP-YN-HTA 78 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSS-GT-TEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeec-cC-CEE
Confidence 79999999999999986421 111 11222 333322334555555425999999997764433 22 244
Q ss_pred EeEEEeCcchhcccHHHHHHHHHHHHH-HhhcCcEEEEEEeecCChhhhhcccC
Q 031082 114 VTAVTVSPEYRRQQLAKKLMNLLEDIS-DKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 114 i~~l~V~p~~rg~Gig~~Ll~~~~~~a-~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
...+.|.|++|++|+|+.|++.++++| ++ .|+.++.+.|...|.+|++||+|
T Consensus 79 ~~~~~v~~~~~~~gig~~l~~~l~~~af~~-~~~~~i~~~v~~~N~~~i~~~~~ 131 (155)
T PF13420_consen 79 ELSIYVSPDYRGKGIGRKLLDELIEYAFKE-LGIHKIYLEVFSSNEKAINFYKK 131 (155)
T ss_dssp EEEEEEEGGGTTSSHHHHHHHHHHHHH-HH-TT-CEEEEEEETT-HHHHHHHHH
T ss_pred EEeeEEChhHCCCcHHHHHHHHHHHHhhhc-cCeEEEEEEEecCCHHHHHHHHh
Confidence 444888899999999999999999999 66 99999999999999999999974
No 25
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.62 E-value=1.5e-14 Score=111.31 Aligned_cols=118 Identities=9% Similarity=0.050 Sum_probs=95.1
Q ss_pred ceeEEEEcccccHHHHHHHHhhh--cC---CCcchHHHHHHhccCCCeEEEEE--c--CCCeEEEEEEEEEecCCCceeE
Q 031082 42 KMTTIRRFCCNDLLRFTSVNLDH--LT---ETFNMSFYMTYLARWPDYFHVAE--G--PGNRIMGYIMGKVEGQGESWHG 112 (166)
Q Consensus 42 ~~~~ir~~~~~D~~~i~~l~~~~--~~---~~~~~~~~~~~~~~~~~~~~v~~--~--~~~~ivG~~~~~~~~~~~~~~~ 112 (166)
..++||+++++|++.+.+|.... |. ..|+...+.+.+... ..+++. + .++.+||++.+..... ..
T Consensus 185 m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~--~~~~~~~~d~~gd~givG~~~~~~~~~----~~ 258 (320)
T TIGR01686 185 LSLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKE--EIVTVSMSDRFGDSGIIGIFVFEKKEG----NL 258 (320)
T ss_pred CEEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCC--CEEEEEEEecCCCCceEEEEEEEecCC----cE
Confidence 34789999999999999998766 43 456667677777554 333333 2 2678999998765433 26
Q ss_pred EEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec--CChhhhhcccC
Q 031082 113 HVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA--SNTPAIKISDM 166 (166)
Q Consensus 113 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~--~N~~a~~~Y~k 166 (166)
+|..++|+|++||+|+|++||+++++.+++ .|+..+.|++.+ .|.+|++||+|
T Consensus 259 ~I~~l~vs~r~~grGig~~Ll~~l~~~a~~-~G~~~i~l~v~~~~~N~~A~~fY~~ 313 (320)
T TIGR01686 259 FIDDLCMSCRALGRGVETRMLRWLFEQALD-LGNHNARLYYRRTERNMPFLSFYEQ 313 (320)
T ss_pred EEEEEEEcHhHhcCcHHHHHHHHHHHHHHH-cCCCeEEEEEeeCCCchHHHHHHHH
Confidence 799999999999999999999999999999 999999998864 79999999985
No 26
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.62 E-value=1.7e-14 Score=94.83 Aligned_cols=101 Identities=20% Similarity=0.301 Sum_probs=76.0
Q ss_pred cHHHHHHHHhhhcCCC-------------cchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEe
Q 031082 53 DLLRFTSVNLDHLTET-------------FNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTV 119 (166)
Q Consensus 53 D~~~i~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V 119 (166)
|++++.++....+... +....+...+......+++++ .++++||++.+. .. ..|..++|
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~ivG~~~~~--~~-----~~i~~l~v 72 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAE-EGGEIVGFAWLE--PD-----GEISHLYV 72 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEE-ETTEEEEEEEEE--TC-----EEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEE-ECCEEEEEEEEc--CC-----CeEEEEEE
Confidence 6677777765544311 234456666666556788888 599999999875 22 45899999
Q ss_pred CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 120 SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|+|||+|+|++|++.+++.+++ ++..+.+. .|..|.+||++
T Consensus 73 ~p~~r~~Gig~~Ll~~~~~~~~~--~~~~l~~~---~~~~a~~~y~~ 114 (117)
T PF13673_consen 73 LPEYRGRGIGRALLDAAEKEAKD--GIRRLTVE---ANERARRFYRK 114 (117)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHTT--TCEEEEEE---C-HHHHHHHHH
T ss_pred ChhhcCCcHHHHHHHHHHHHHHc--CCcEEEEE---eCHHHHHHHHh
Confidence 99999999999999999999954 88877766 88899999975
No 27
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.61 E-value=4.4e-14 Score=101.16 Aligned_cols=123 Identities=10% Similarity=0.090 Sum_probs=87.2
Q ss_pred eeEEEEcccccHHHHHHHHhh--hcCCCcc---------h-------HHHHHHhccCCCeEEEEEc-CCCeEEEEEEEEE
Q 031082 43 MTTIRRFCCNDLLRFTSVNLD--HLTETFN---------M-------SFYMTYLARWPDYFHVAEG-PGNRIMGYIMGKV 103 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~--~~~~~~~---------~-------~~~~~~~~~~~~~~~v~~~-~~~~ivG~~~~~~ 103 (166)
.+.||+++++|.+.+.++..+ .+..+|. . ..+...........+++.+ .++++||.+.+..
T Consensus 17 rl~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~ 96 (194)
T PRK10809 17 RLVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSN 96 (194)
T ss_pred cEEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEe
Confidence 478999999999999998754 2211221 1 1111112222233444432 3679999998764
Q ss_pred ecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 104 EGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 104 ~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.... ........+.|+|+|||+|+|+.+++.+++++++..|++++.+.|.+.|.+|+++|+|
T Consensus 97 ~~~~-~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek 158 (194)
T PRK10809 97 VVRG-SFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLAR 158 (194)
T ss_pred ecCC-CeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHH
Confidence 4321 1122345578999999999999999999999998569999999999999999999986
No 28
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.60 E-value=2.9e-14 Score=98.19 Aligned_cols=120 Identities=20% Similarity=0.129 Sum_probs=85.8
Q ss_pred EEEcc-cccHHHHHHHHhhhcC-----CCcc---hHHHHHHhc-cCCCeEEEEEcCCCeEEEEEEEEEecCC---CceeE
Q 031082 46 IRRFC-CNDLLRFTSVNLDHLT-----ETFN---MSFYMTYLA-RWPDYFHVAEGPGNRIMGYIMGKVEGQG---ESWHG 112 (166)
Q Consensus 46 ir~~~-~~D~~~i~~l~~~~~~-----~~~~---~~~~~~~~~-~~~~~~~v~~~~~~~ivG~~~~~~~~~~---~~~~~ 112 (166)
||+++ .+|++.|.++...... ..++ ...+.+.+. ......+|+. .+|+++|++.+..-..+ .....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~-~dg~~~g~~~~~~~~~~~~~~~~~~ 79 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAE-DDGEPIGYFEIYWPDEDYDADDGDR 79 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEE-ETTEEEEEEEEEEGGGSS---TTEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEE-ECCEEEEEEEEecccccccCCCCEE
Confidence 68999 9999999999854421 2222 233444554 3344578888 49999999976432211 11235
Q ss_pred EEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 113 HVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 113 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++.++++|++||+|+|+.+++.+++.+++..++..+.+++.++|.+|+++|+|
T Consensus 80 ~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k 133 (152)
T PF13523_consen 80 GIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEK 133 (152)
T ss_dssp EEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHH
T ss_pred EEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHH
Confidence 688889999999999999999999999999348999999999999999999975
No 29
>PLN02825 amino-acid N-acetyltransferase
Probab=99.59 E-value=9.3e-15 Score=117.60 Aligned_cols=114 Identities=21% Similarity=0.069 Sum_probs=86.0
Q ss_pred EEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchh
Q 031082 45 TIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYR 124 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r 124 (166)
.||+++.+|++.+.+|........+......+.+......+++++ .||++|||+.+...... ..++|..++|+|+||
T Consensus 369 ~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~ei~~f~V~e-~Dg~IVG~aal~~~~~~--~~aEI~~laV~P~yR 445 (515)
T PLN02825 369 GTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRALDSFVVVE-REGSIIACAALFPFFEE--KCGEVAAIAVSPECR 445 (515)
T ss_pred hheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhcCCcEEEEE-ECCEEEEEEEEEeecCC--CcEEEEEEEECHHHc
Confidence 499999999999999987654322211111222233334678888 59999999976544322 247899999999999
Q ss_pred cccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 125 RQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 125 g~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|+|+|++|++++++.|++ .|+..+.+.+ +.+.+||+|
T Consensus 446 GkGiG~~LL~~le~~Ar~-~G~~~L~Llt----t~a~~fY~k 482 (515)
T PLN02825 446 GQGQGDKLLDYIEKKAAS-LGLEKLFLLT----TRTADWFVR 482 (515)
T ss_pred CCCHHHHHHHHHHHHHHH-CCCCEEEEEe----CcHHHHHHH
Confidence 999999999999999999 9999999876 257899975
No 30
>PRK10514 putative acetyltransferase; Provisional
Probab=99.59 E-value=2.1e-14 Score=98.03 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=77.8
Q ss_pred eeEEEEcccccHHHHHHHHhhhcC------CCcchHHHHHHhcc--CCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEE
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLT------ETFNMSFYMTYLAR--WPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHV 114 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~------~~~~~~~~~~~~~~--~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i 114 (166)
|+.||+++++|.+++.++....+. .+.....+...+.. ....++++...++++||++.+.. ..+
T Consensus 1 m~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~--------~~~ 72 (145)
T PRK10514 1 MISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG--------GHM 72 (145)
T ss_pred CceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec--------CcE
Confidence 467999999999999998865321 11222222222211 12234444324789999987531 335
Q ss_pred eEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 115 TAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 115 ~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
..++|+|+|||+|+|++|++.+++.+. ++.+.+...|.+|++||+|
T Consensus 73 ~~~~v~p~~rgkGig~~Ll~~~~~~~~------~i~~~v~~~N~~a~~~yek 118 (145)
T PRK10514 73 EALFVDPDVRGCGVGRMLVEHALSLHP------ELTTDVNEQNEQAVGFYKK 118 (145)
T ss_pred eEEEECHHhccCCHHHHHHHHHHHhcc------ccEEEeecCCHHHHHHHHH
Confidence 689999999999999999999998653 4678899999999999986
No 31
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.57 E-value=9.6e-14 Score=105.30 Aligned_cols=123 Identities=20% Similarity=0.156 Sum_probs=90.5
Q ss_pred ceeEEEEccc-ccHHHHHHHHhhhcCC-----CcchHHHHHHhcc---CCCeEEEEEcC-CCeEEEEEEEEEecCCCcee
Q 031082 42 KMTTIRRFCC-NDLLRFTSVNLDHLTE-----TFNMSFYMTYLAR---WPDYFHVAEGP-GNRIMGYIMGKVEGQGESWH 111 (166)
Q Consensus 42 ~~~~ir~~~~-~D~~~i~~l~~~~~~~-----~~~~~~~~~~~~~---~~~~~~v~~~~-~~~ivG~~~~~~~~~~~~~~ 111 (166)
..+++|+++. .|.+.+.++....+.+ .|....+...... .+..++++.+. +|++||++........ ...
T Consensus 148 ~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~-~~~ 226 (292)
T TIGR03448 148 DGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDE-PAL 226 (292)
T ss_pred CCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCC-Cce
Confidence 3478999864 5888888887666642 3444333332211 23446667642 6899999865543321 123
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.+|..++|+|+|||+|||++|++.+++++++ .|+..+.+.+...|.+|++||+|
T Consensus 227 ~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~-~g~~~v~l~v~~~N~~a~~~y~k 280 (292)
T TIGR03448 227 GEVYVVGVDPAAQGRGLGDALTLIGLHHLAA-RGLPAVMLYVEADNEAAVRTYEK 280 (292)
T ss_pred eEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEeCCCHHHHHHHHH
Confidence 5677789999999999999999999999999 89999999999999999999986
No 32
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.57 E-value=1.7e-13 Score=95.13 Aligned_cols=122 Identities=16% Similarity=0.146 Sum_probs=94.7
Q ss_pred eEEEEcccccHHHHHHHHhhhcCC--------CcchHHHHHHhccCC---CeEEEEEcCCCeEEEEEEEEEecC-CCcee
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTE--------TFNMSFYMTYLARWP---DYFHVAEGPGNRIMGYIMGKVEGQ-GESWH 111 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~--------~~~~~~~~~~~~~~~---~~~~v~~~~~~~ivG~~~~~~~~~-~~~~~ 111 (166)
+.||+++..|++.+.++.+..... +-+...+.+.+.... -.++|++..+|+++|++.+..... .....
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~ 81 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRH 81 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccce
Confidence 579999999999999998776642 222334444443322 256777755699999997765544 22233
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
..-..++|+|+.||+|+|++|++.+++.+.+ +|+..+...+..+|.++++|+++
T Consensus 82 tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~-~g~~~lva~I~~~n~aSi~lh~~ 135 (169)
T COG1247 82 TVELSIYLDPAARGKGLGKKLLQALITEARA-LGVRELVAGIESDNLASIALHEK 135 (169)
T ss_pred EEEEEEEECcccccccHHHHHHHHHHHHHHh-CCeEEEEEEEcCCCcHhHHHHHH
Confidence 5567799999999999999999999999999 99999999999999999999864
No 33
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.57 E-value=3.4e-14 Score=113.20 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=85.9
Q ss_pred eEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcch
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEY 123 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 123 (166)
+.||+++.+|++++.++........+......+.+......+++++ .+++++|++.+...... ..++|..++|+|+|
T Consensus 283 ~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~-~dg~iVG~~~~~~~~~~--~~~~I~~l~V~p~~ 359 (429)
T TIGR01890 283 ESIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIE-HDGNIIGCAALYPYAEE--DCGEMACLAVSPEY 359 (429)
T ss_pred hheEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEE-ECCEEEEEEEEEecCCC--CeEEEEEEEECHHH
Confidence 4699999999999999976544333332222333434344567777 48999999977654322 24789999999999
Q ss_pred hcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 124 RRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 124 rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
||+|+|++||+++++++++ .|+..+++. ..| +.+||+|
T Consensus 360 Rg~GiG~~Ll~~l~~~A~~-~G~~~l~v~--~~~--a~~fY~k 397 (429)
T TIGR01890 360 QDGGRGERLLAHIEDRARQ-MGISRLFVL--TTR--TGHWFRE 397 (429)
T ss_pred cCCCHHHHHHHHHHHHHHH-cCCCEEEEe--ecc--hHHHHHH
Confidence 9999999999999999999 999987654 334 6789975
No 34
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.56 E-value=2.7e-14 Score=96.65 Aligned_cols=105 Identities=14% Similarity=0.133 Sum_probs=82.6
Q ss_pred EEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEE-ecCCCceeEEEeEEEeCcch
Q 031082 45 TIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKV-EGQGESWHGHVTAVTVSPEY 123 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~-~~~~~~~~~~i~~l~V~p~~ 123 (166)
.||.++.+|++.|.++........-...--...+...-..|++++ .+|.+|||+.+.. ...+ .+.+..++|+|+|
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E-~~g~viGC~aL~~~~~~~---~gE~~~laV~pd~ 77 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIE-RDGKVIGCAALHPVLEED---LGELRSLAVHPDY 77 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeee-eCCcEEEEEeecccCccC---eeeEEEEEECHHh
Confidence 589999999999999987765432211112233334456688888 4999999998773 4444 3889999999999
Q ss_pred hcccHHHHHHHHHHHHHHhhcCcEEEEEEee
Q 031082 124 RRQQLAKKLMNLLEDISDKIDKAYFVDLFVR 154 (166)
Q Consensus 124 rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~ 154 (166)
|++|+|..|++.++..|++ .|++.+++.+.
T Consensus 78 r~~G~G~~Ll~~~~~~Ar~-~gi~~lf~LTt 107 (153)
T COG1246 78 RGSGRGERLLERLLADARE-LGIKELFVLTT 107 (153)
T ss_pred cCCCcHHHHHHHHHHHHHH-cCCceeeeeec
Confidence 9999999999999999999 99999888763
No 35
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.55 E-value=1.2e-13 Score=98.13 Aligned_cols=121 Identities=19% Similarity=0.202 Sum_probs=88.4
Q ss_pred eeEEEEcccccHHHHHHHHhhhcC------CCcch-----HHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCcee
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLT------ETFNM-----SFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWH 111 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~------~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~ 111 (166)
.+.+|+++++|++.+.++...... .++.. ..+...........|++. .+|++||++.+....... ..
T Consensus 6 ~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~g~~iG~~~~~~~~~~~-~~ 83 (186)
T PRK15130 6 SVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVE-CDGEKAGLVELVEINHVH-RR 83 (186)
T ss_pred eeEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEE-ECCEEEEEEEEEeecCCC-Ce
Confidence 368999999999999998643311 11110 112222233344567777 489999999765443211 12
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+.+ .++|+|+|||+|+|+++++.+++++.+..++.++.+.+...|.+|++||+|
T Consensus 84 ~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek 137 (186)
T PRK15130 84 AEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRK 137 (186)
T ss_pred EEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHH
Confidence 334 599999999999999999999999987579999999999999999999986
No 36
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.55 E-value=4.9e-14 Score=116.69 Aligned_cols=113 Identities=14% Similarity=0.047 Sum_probs=84.0
Q ss_pred eEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcch
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEY 123 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 123 (166)
+.||+++++|++.+.++.................+......+++++ .+|++|||+.+...+.. ..+|..++|+|+|
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~Va~-~~g~IVG~~~l~~~~~~---~~~I~~i~V~P~~ 539 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAVAE-HHGEVTGCASLYIYDSG---LAEIRSLGVEAGW 539 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcccCcEEEEE-ECCEEEEEEEEEEcCCC---eEEEEEEEECHHH
Confidence 7899999999999999976543211111001112222334567777 48999999977654332 3679999999999
Q ss_pred hcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 124 RRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 124 rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
||+|||++|++.+++++++ .|+..+.+.+ .+.+||+|
T Consensus 540 rGkGIGk~Ll~~l~~~ak~-~g~~~i~l~~-----~a~~FYek 576 (614)
T PRK12308 540 QVQGQGSALVQYLVEKARQ-MAIKKVFVLT-----RVPEFFMK 576 (614)
T ss_pred cCCCHHHHHHHHHHHHHHH-CCCCEEEEee-----CcHHHHHH
Confidence 9999999999999999999 9999988865 25689986
No 37
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.55 E-value=3.9e-14 Score=113.29 Aligned_cols=115 Identities=17% Similarity=0.104 Sum_probs=84.3
Q ss_pred eEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcch
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEY 123 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 123 (166)
+.||+++.+|++++.++........+........+......+++++ .+++++|++.+..... ...++|..++|+|+|
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~va~-~dg~iVG~~~~~~~~~--~~~~~I~~l~V~p~~ 371 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRSREQLEREIDKFTVIE-RDGLIIGCAALYPFPE--EKMGEMACLAVHPDY 371 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhcccCcEEEEE-ECCEEEEEEEEEEcCC--CCeEEEEEEEECHHH
Confidence 4699999999999999875432222211111223333334577777 4899999997654432 123789999999999
Q ss_pred hcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 124 RRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 124 rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
||+|+|++|++++++++++ .|+..+.+.+ .+|++||+|
T Consensus 372 Rg~GiG~~Ll~~l~~~a~~-~g~~~l~l~~----~~a~~fY~k 409 (441)
T PRK05279 372 RGSGRGERLLKRIEQRARQ-LGLKRLFVLT----TRTAHWFLE 409 (441)
T ss_pred cCCCHHHHHHHHHHHHHHH-cCCCEEEEec----chHHHHHHH
Confidence 9999999999999999999 9999887653 468999985
No 38
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.51 E-value=4.1e-13 Score=88.40 Aligned_cols=119 Identities=22% Similarity=0.279 Sum_probs=87.1
Q ss_pred eEEEEcccccHHH-HHHHHhhhcC-CCcchHHHHHHh----ccCC-CeEEEEEcC-CCeEEEEEEEEEecC---CCceeE
Q 031082 44 TTIRRFCCNDLLR-FTSVNLDHLT-ETFNMSFYMTYL----ARWP-DYFHVAEGP-GNRIMGYIMGKVEGQ---GESWHG 112 (166)
Q Consensus 44 ~~ir~~~~~D~~~-i~~l~~~~~~-~~~~~~~~~~~~----~~~~-~~~~v~~~~-~~~ivG~~~~~~~~~---~~~~~~ 112 (166)
+.+|++..+|+.. ..++..+.-. -.-+++.|..++ ...+ ....|++|. .+++||.+.+..+.. .....+
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~vt~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~rG 86 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVVTREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCGSRG 86 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhccccCHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhcccccC
Confidence 7899999999986 5555533222 122222223222 3333 345566653 588999997766654 223348
Q ss_pred EEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 113 HVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 113 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|.++.|+++|||+++|+.|++.+...++. .|+.++.|++.+.| +.||+|
T Consensus 87 hiEDVVV~~~~rgk~LGkllv~~Lv~l~k~-lgcYKi~LdC~~~n---v~FYeK 136 (150)
T KOG3396|consen 87 HIEDVVVDSEYRGKQLGKLLVETLVDLAKS-LGCYKIILDCDPKN---VKFYEK 136 (150)
T ss_pred ceeEEEeChhhhhhHHhHHHHHHHHHHHHh-cCcEEEEEecchhh---hhHHHH
Confidence 899999999999999999999999999999 99999999999987 578875
No 39
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.50 E-value=3e-13 Score=93.28 Aligned_cols=118 Identities=10% Similarity=-0.005 Sum_probs=85.4
Q ss_pred EEEEcccccHHHHHHHHhhhc------CCC-cc----hHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEE
Q 031082 45 TIRRFCCNDLLRFTSVNLDHL------TET-FN----MSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGH 113 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~l~~~~~------~~~-~~----~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 113 (166)
.+|+++++|++.+.++..+.. ..+ .+ ..++..........++++. .+|++||++.+...... .....
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~vG~~~~~~~~~~-~~~~~ 79 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVC-QESRPIGVISFTDINLV-HKSAF 79 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEE-ECCEEEEEEEEEecChh-hCeEE
Confidence 479999999999998863321 111 22 1223333333334567777 58999999987654321 11234
Q ss_pred EeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 114 VTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 114 i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+. +++.|++| +|+|+++++.+++++++..++..+.+.+...|.+|++||+|
T Consensus 80 ~g-~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k 130 (156)
T TIGR03585 80 WG-IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEK 130 (156)
T ss_pred EE-EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHH
Confidence 43 55999999 99999999999999997479999999999999999999986
No 40
>PRK10314 putative acyltransferase; Provisional
Probab=99.50 E-value=1.4e-13 Score=95.23 Aligned_cols=114 Identities=10% Similarity=0.017 Sum_probs=83.2
Q ss_pred EEEcccccHHHHHHHHhhhcCCCcchHHHHHHhcc----CCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCc
Q 031082 46 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLAR----WPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSP 121 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p 121 (166)
+..++.+++.++..++...|..+....+ .+ ++. .....+++. .++++||++.+....+. ....+|..++|+|
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~-~e-~D~~d~~~~~~h~~~~-~~~~~vg~~r~~~~~~~-~~~~~i~rv~V~~ 84 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPY-QD-IDGDDLTGDNRHILGW-KNDELVAYARILKSDDD-LEPVVIGRVIVSE 84 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCc-cc-cCCCCCCCCcEEEEEE-ECCEEEEEEEEecCCCC-CCCEEEEEEEECH
Confidence 4567788899999999999875433222 11 222 123455666 48999999987654321 1137899999999
Q ss_pred chhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 122 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|||+|+|++||+.+++++++..+...+.|.+ +..+..||+|
T Consensus 85 ~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~fY~k 126 (153)
T PRK10314 85 ALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNFYQS 126 (153)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHHHHH
Confidence 99999999999999999998833677788775 4568899986
No 41
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.49 E-value=9.4e-13 Score=93.06 Aligned_cols=121 Identities=5% Similarity=-0.074 Sum_probs=86.4
Q ss_pred eeEEEEcccccHHHHHHHHh--hhc-------CCC-cchHHHHHHhc-------cCCCeEEEEEcCCCeEEEEEEEEEec
Q 031082 43 MTTIRRFCCNDLLRFTSVNL--DHL-------TET-FNMSFYMTYLA-------RWPDYFHVAEGPGNRIMGYIMGKVEG 105 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~--~~~-------~~~-~~~~~~~~~~~-------~~~~~~~v~~~~~~~ivG~~~~~~~~ 105 (166)
.+.+|+++++|++.+.++.. ... +.. .+.....+.+. ......+++. .+|++||++.+....
T Consensus 10 rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~-~~~~~iG~~~l~~~~ 88 (179)
T PRK10151 10 SLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIF-KEDELIGVLSFNRIE 88 (179)
T ss_pred cEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEE-ECCEEEEEEEEEeec
Confidence 37899999999999998872 211 111 12222222221 1122356666 389999999765443
Q ss_pred CCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 106 QGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 106 ~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
... ..+.| .+.++|+|||+|+|+++++.+++++++..+++++.+.+.+.|.+|+++|+|
T Consensus 89 ~~~-~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek 147 (179)
T PRK10151 89 PLN-KTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALR 147 (179)
T ss_pred cCC-CceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHH
Confidence 211 12444 468999999999999999999999997578999999999999999999986
No 42
>PRK01346 hypothetical protein; Provisional
Probab=99.49 E-value=6.7e-13 Score=105.32 Aligned_cols=117 Identities=21% Similarity=0.051 Sum_probs=87.4
Q ss_pred eeEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhc-cCCCeEEEEEcCCCeEEEEEEEEEec-----CCCceeEEEeE
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLA-RWPDYFHVAEGPGNRIMGYIMGKVEG-----QGESWHGHVTA 116 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~ivG~~~~~~~~-----~~~~~~~~i~~ 116 (166)
.+.||+++++|++++.++....|....+......... ..+...+++. .+|++||++...... .......+|..
T Consensus 6 ~~~iR~~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~-~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~ 84 (411)
T PRK01346 6 AITIRTATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAF-DGDEVVGTAGAFDLRLTVPGGAVLPAAGVTA 84 (411)
T ss_pred CceeecCCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEE-ECCEEEEEEEEeccccccCCCCccceeEEEE
Confidence 4789999999999999999888876544333222221 1234567777 489999999754322 11123578999
Q ss_pred EEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 117 VTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 117 l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
++|+|+|||+|+|++||+++++.+++ .|+..+.|.+.. .+||+|
T Consensus 85 v~V~P~~RgrGig~~Ll~~~l~~a~~-~g~~~~~L~~~~-----~~~Y~r 128 (411)
T PRK01346 85 VTVAPTHRRRGLLTALMREQLRRIRE-RGEPVAALTASE-----GGIYGR 128 (411)
T ss_pred EEEChhhcCCCHHHHHHHHHHHHHHH-CCCcEEEEECCc-----hhhHhh
Confidence 99999999999999999999999999 999888877543 367875
No 43
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.48 E-value=1.9e-12 Score=87.64 Aligned_cols=121 Identities=16% Similarity=0.162 Sum_probs=82.9
Q ss_pred eEEEEcccccHHHHHHHHhhhc-------CCC-cchHHHHHHhc----cC---CCeEEEEEcC-CCeEEEEEEEEEecCC
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHL-------TET-FNMSFYMTYLA----RW---PDYFHVAEGP-GNRIMGYIMGKVEGQG 107 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~-------~~~-~~~~~~~~~~~----~~---~~~~~v~~~~-~~~ivG~~~~~~~~~~ 107 (166)
+.||+++++|++.+.++..... ... .+.....+.+. .. ...++++.+. ++++||++.+.....
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~- 80 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDK- 80 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEET-
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeeccc-
Confidence 6799999999999999984211 111 12222222221 11 1234555433 458999998743321
Q ss_pred CceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 108 ESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 108 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
....+.+. +.|.|+|||+|+|+.++..+++++.+..++.++...+.++|.+|+++++|
T Consensus 81 ~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k 138 (142)
T PF13302_consen 81 NNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEK 138 (142)
T ss_dssp TTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHH
T ss_pred CCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHH
Confidence 11135555 88999999999999999999999965499999999999999999999875
No 44
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.47 E-value=4e-13 Score=101.90 Aligned_cols=109 Identities=12% Similarity=0.078 Sum_probs=81.1
Q ss_pred EcccccHHHHHHHHhhhcC----CCcchHHHHHHhcc---CCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeC
Q 031082 48 RFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYLAR---WPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVS 120 (166)
Q Consensus 48 ~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~~---~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~ 120 (166)
+++++|++++.+|...+.. .++...+.. .+.. .....+++. .++++||++.+....... .++..++|+
T Consensus 5 ~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~---~~~~~l~V~ 79 (292)
T TIGR03448 5 ALDADLRRDVRELLAAATAVDGVAPVSEQVLR-GLREPGAGHTRHLVAV-DSDPIVGYANLVPARGTD---PAMAELVVH 79 (292)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHh-hccccCCCCceEEEEE-ECCEEEEEEEEEcCCCCc---ceEEEEEEC
Confidence 4788899999988865433 345555433 3322 223466777 488999999776543332 568899999
Q ss_pred cchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 121 PEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 121 p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|+|||+|||++|++.+++.+.. .+.+.+...|.+|++||++
T Consensus 80 p~~rg~GiG~~Ll~~~~~~~~~-----~~~~~~~~~n~~a~~fy~~ 120 (292)
T TIGR03448 80 PAHRRRGIGRALIRALLAKGGG-----RLRVWAHGDLPAARALASR 120 (292)
T ss_pred HhhcCCCHHHHHHHHHHHhccC-----ceEEEEcCCCHHHHHHHHH
Confidence 9999999999999999987643 5778888899999999975
No 45
>PRK10562 putative acetyltransferase; Provisional
Probab=99.45 E-value=1.3e-12 Score=89.27 Aligned_cols=106 Identities=20% Similarity=0.237 Sum_probs=76.1
Q ss_pred EEEcccccHHHHHHHHhhhc--CCCcchH-HH-------HHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEe
Q 031082 46 IRRFCCNDLLRFTSVNLDHL--TETFNMS-FY-------MTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVT 115 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~--~~~~~~~-~~-------~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~ 115 (166)
||+++.+|++.+.++..... ..++... .. ...+. .....+++. .++++||++.+... ..+.
T Consensus 2 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~-~~~~~iG~~~~~~~-------~~i~ 72 (145)
T PRK10562 2 IREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYL-PAAQTWVWE-EDGKLLGFVSVLEG-------RFVG 72 (145)
T ss_pred cccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhc-CcccEEEEE-ECCEEEEEEEEeec-------cEEE
Confidence 78999999999999976542 2222211 11 11111 223456666 47899999976432 3477
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++|+|+|||+|+|+.|++.+++.+ ..+.+.+...|.+|++||+|
T Consensus 73 ~~~v~~~~rg~G~g~~ll~~~~~~~------~~~~~~v~~~N~~s~~~y~k 117 (145)
T PRK10562 73 ALFVAPKAVRRGIGKALMQHVQQRY------PHLSLEVYQKNQRAVNFYHA 117 (145)
T ss_pred EEEECHHHcCCCHHHHHHHHHHhhC------CeEEEEEEcCChHHHHHHHH
Confidence 8999999999999999999887743 35788899999999999986
No 46
>PRK09831 putative acyltransferase; Provisional
Probab=99.45 E-value=3.2e-13 Score=92.64 Aligned_cols=102 Identities=21% Similarity=0.271 Sum_probs=73.8
Q ss_pred EEEEcccccHHHHHHHHhhhcCC----CcchHH-----------HHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCc
Q 031082 45 TIRRFCCNDLLRFTSVNLDHLTE----TFNMSF-----------YMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGES 109 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~l~~~~~~~----~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~ 109 (166)
.||+++++|++.+.++....+.+ .++... +...+. ...++++. .+|++||++.+..
T Consensus 2 ~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~-~~~~iiG~~~~~~------ 72 (147)
T PRK09831 2 QIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLA--KSQVRVAV-INAQPVGFITCIE------ 72 (147)
T ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHh--cCceEEEE-ECCEEEEEEEehh------
Confidence 58999999999999997655432 122211 122222 24567777 5899999986531
Q ss_pred eeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 110 WHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 110 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++..++|+|+|||+|+|++|++++++.+++ +.+. .|..|++||+|
T Consensus 73 --~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~--------l~v~-~~~~a~~~Y~k 118 (147)
T PRK09831 73 --HYIDMLFVDPEYTRRGVASALLKPLIKSESE--------LTVD-ASITAKPFFER 118 (147)
T ss_pred --ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh--------eEee-cchhhHHHHHH
Confidence 4578899999999999999999999998765 2333 35689999986
No 47
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.43 E-value=8.5e-13 Score=81.14 Aligned_cols=72 Identities=31% Similarity=0.440 Sum_probs=57.8
Q ss_pred CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhh
Q 031082 83 DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIK 162 (166)
Q Consensus 83 ~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~ 162 (166)
..++++. .++++||++.+....+ ..+|..++|+|+|||+|||++|++.+.+.+.. ..+++.+ ++.+..
T Consensus 3 ~~~~~~~-~~~~ivG~~~~~~~~~----~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~----~~i~l~~---~~~~~~ 70 (79)
T PF13508_consen 3 ERFFVAE-DDGEIVGFIRLWPNED----FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS----KKIFLFT---NPAAIK 70 (79)
T ss_dssp EEEEEEE-ETTEEEEEEEEEETTT----EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC----SEEEEEE---EHHHHH
T ss_pred cEEEEEE-ECCEEEEEEEEEEcCC----EEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC----CcEEEEE---cHHHHH
Confidence 4577787 4999999998855544 37899999999999999999999999888855 3456665 567999
Q ss_pred cccC
Q 031082 163 ISDM 166 (166)
Q Consensus 163 ~Y~k 166 (166)
||+|
T Consensus 71 fY~~ 74 (79)
T PF13508_consen 71 FYEK 74 (79)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9974
No 48
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.43 E-value=8.6e-12 Score=86.83 Aligned_cols=110 Identities=18% Similarity=0.092 Sum_probs=85.6
Q ss_pred ceeEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhcc----CCCeEEEEEcCCCeEEEEEEEEEecCC--CceeEEEe
Q 031082 42 KMTTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLAR----WPDYFHVAEGPGNRIMGYIMGKVEGQG--ESWHGHVT 115 (166)
Q Consensus 42 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~ivG~~~~~~~~~~--~~~~~~i~ 115 (166)
.++.||..++.|++++.++....|. +.......+.+.. .....+|+.+ +|++||.+.++.-.-. .....-+.
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~-~~~e~~~v~~lR~~~~~~~~LslVA~d-~g~vvG~Il~s~v~~~g~~~~~~~La 79 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFG-PGREAKLVDKLREGGRPDLTLSLVAED-DGEVVGHILFSPVTVGGEELGWLGLA 79 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhh-cchHHHHHHHHHhcCCcccceeEEEee-CCEEEEEEEEeEEEecCcccceEEEE
Confidence 3578999999999999999999887 3334444444433 3356789995 7999999977544322 22335688
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEee
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVR 154 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~ 154 (166)
.++|+|+|||||||++|++..++.++. .|+..+.+.-+
T Consensus 80 PLaV~p~~qg~GIG~~Lvr~~le~a~~-~G~~~v~vlGd 117 (171)
T COG3153 80 PLAVDPEYQGQGIGSALVREGLEALRL-AGASAVVVLGD 117 (171)
T ss_pred eEEEchhhcCCcHHHHHHHHHHHHHHH-CCCCEEEEecC
Confidence 899999999999999999999999999 99998887543
No 49
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.38 E-value=7.5e-12 Score=87.07 Aligned_cols=114 Identities=18% Similarity=0.141 Sum_probs=89.0
Q ss_pred ccHHHHHHHHhhhcC-----CC--cchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchh
Q 031082 52 NDLLRFTSVNLDHLT-----ET--FNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYR 124 (166)
Q Consensus 52 ~D~~~i~~l~~~~~~-----~~--~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r 124 (166)
.+++.+++|...... .+ |....=...+......++++.+..+.+|||.++...-+......+...+-|.++||
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 566667777654332 12 44433334445555667777753448999999988877666788999999999999
Q ss_pred cccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 125 RQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 125 g~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|+|||+.|++.++..+.. ...+.|.|+|-..|.+|++||.+
T Consensus 134 ~kGiGk~LL~~l~~~a~~-~~~~kVmLTVf~~N~~al~Fy~~ 174 (202)
T KOG2488|consen 134 GKGIGKFLLDTLEKLADS-RHMRKVMLTVFSENIRALGFYHR 174 (202)
T ss_pred ccChHHHHHHHHHHHHHH-HHhhhheeeeecccchhHHHHHH
Confidence 999999999999999999 88889999999999999999964
No 50
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.37 E-value=1.7e-12 Score=91.36 Aligned_cols=121 Identities=20% Similarity=0.250 Sum_probs=96.2
Q ss_pred eeEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCC-------ceeEEEe
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGE-------SWHGHVT 115 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~-------~~~~~i~ 115 (166)
++.++..+++++.++..|....|+..+..+++.+.+...+ ..-+|. .++..+|-.......... ....+|.
T Consensus 16 ~~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~~~-~~~~A~-~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~ 93 (187)
T KOG3138|consen 16 LIELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSNGD-LTQLAY-YNEIAVGAVACKLIKFVQNAKRLFGNRVIYIL 93 (187)
T ss_pred ceeeccCCcchHHHHHHHhccccCcchHHHHHHHHHhcCC-HHHhhh-hccccccceeeeehhhhhhhhhhhccceeEEE
Confidence 4789999999999999999999999999888887776533 333333 245555555443332211 0037899
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcC-cEEEEEEeecCChhhhhcccC
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDK-AYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g-~~~i~l~v~~~N~~a~~~Y~k 166 (166)
.++|+|.||.+|||+.|++.+.+.+.+ .. +..++|++...|..|+.||++
T Consensus 94 ~Lgvl~~yR~~gIGs~Ll~~~~~~~~~-~~~~~~v~lHv~~~n~~ai~~Y~~ 144 (187)
T KOG3138|consen 94 SLGVLPRYRNKGIGSKLLEFVKKYCSE-AHQCRRVYLHVQAVNESAIEFYEK 144 (187)
T ss_pred eecccHHHHhcchHHHHHHHHHHHHhc-ccccceEEEEEEeCCCcHHHHHHh
Confidence 999999999999999999999999999 66 899999999999999999985
No 51
>PRK13688 hypothetical protein; Provisional
Probab=99.23 E-value=6.6e-11 Score=81.95 Aligned_cols=99 Identities=12% Similarity=0.085 Sum_probs=66.0
Q ss_pred EEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecC-------CCceeEEEeEEE
Q 031082 46 IRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQ-------GESWHGHVTAVT 118 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~-------~~~~~~~i~~l~ 118 (166)
+|+++.+|+.++.++....+.. .....++++. .++++||++.+..... ......+|..++
T Consensus 20 ~~~~~~~dl~~l~~l~~~~f~~------------~~~~~~~~~~-~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~ 86 (156)
T PRK13688 20 FREFGNQELSMLEELQANIIEN------------DSESPFYGIY-YGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLE 86 (156)
T ss_pred HHHhcHHHHHHHHhhhhhEeec------------CCCCCEEEEE-ECCEEEEEEEEEecCCcccccccCCCCeEEEEEEE
Confidence 4666777777777776666521 1234556676 4899999986543221 112236799999
Q ss_pred eCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 119 VSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 119 V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
|+|+|||+|+|++|++.+ .+ .++. +.+...| .|.+||+|
T Consensus 87 V~p~~rgkGiG~~Ll~~a----~~-~~~~---~~~~~~~-~a~~FY~k 125 (156)
T PRK13688 87 VLPKYQNRGYGEMLVDFA----KS-FQLP---IKTIARN-KSKDFWLK 125 (156)
T ss_pred ECHHHcCCCHHHHHHHHH----HH-hCCe---EEEEecc-chHHHHHh
Confidence 999999999999999854 34 4443 2344455 58899986
No 52
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.20 E-value=1.7e-10 Score=72.10 Aligned_cols=53 Identities=26% Similarity=0.324 Sum_probs=46.7
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+.|..+.|+|+|||+|+|+.++..+.+.+.+ .|.. ..+.+..+|.+|++||+|
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~-~g~~-~~l~v~~~N~~s~~ly~k 74 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLE-RGKT-PFLYVDADNEASIRLYEK 74 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHH-TTSE-EEEEEETT-HHHHHHHHH
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHh-CCCc-EEEEEECCCHHHHHHHHH
Confidence 6799999999999999999999999999999 7765 578899999999999985
No 53
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.18 E-value=1.1e-10 Score=88.68 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=58.7
Q ss_pred eEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhc
Q 031082 84 YFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKI 163 (166)
Q Consensus 84 ~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~ 163 (166)
.+++.+ .++++||++.+.. ..|..++|+|+|||+|+|++||+.+++.+++ .|+..++|.+... +..|
T Consensus 7 ~~~v~~-~~~~iVG~~~l~~--------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~-~g~~~i~L~t~~~---~~~f 73 (297)
T cd02169 7 TVGIFD-DAGELIATGSIAG--------NVLKCVAVCPKYQGEGLALKIVSELINKAYE-EGIFHLFLFTKPK---NAKF 73 (297)
T ss_pred EEEEEE-ECCEEEEEEEecc--------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEccc---HHHH
Confidence 455555 4799999986632 2488999999999999999999999999999 9999999998654 4689
Q ss_pred ccC
Q 031082 164 SDM 166 (166)
Q Consensus 164 Y~k 166 (166)
|+|
T Consensus 74 Yek 76 (297)
T cd02169 74 FRG 76 (297)
T ss_pred HHH
Confidence 975
No 54
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=99.08 E-value=1.7e-09 Score=74.38 Aligned_cols=119 Identities=20% Similarity=0.206 Sum_probs=81.8
Q ss_pred eEEEEcccccHHHHHHHHhhhcCC-------Ccc-------hHHHHHHhccC-------C----CeEEEEEcCCCeEEEE
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTE-------TFN-------MSFYMTYLARW-------P----DYFHVAEGPGNRIMGY 98 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~-------~~~-------~~~~~~~~~~~-------~----~~~~v~~~~~~~ivG~ 98 (166)
+.++..+..|.+++.+........ .|. ...+.+.+... + ...+.+.+.|+++||+
T Consensus 4 ~~l~~p~L~~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~~d~~ivG~ 83 (174)
T COG3981 4 MKLRRPTLKDKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVDEDGQIVGF 83 (174)
T ss_pred ccccCCchhhHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEecCCcEEEE
Confidence 567778888888888776443321 111 11122222221 1 2245555458999999
Q ss_pred EEEEEecCCCc--eeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 99 IMGKVEGQGES--WHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 99 ~~~~~~~~~~~--~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
+.+...-.+.. ..++|. ..|.|..||+|+|+++++.+++.|++ +|++.+-+++..+|.+|.+.-
T Consensus 84 i~lRh~Ln~~ll~~gGHIG-Y~VrPseR~KGYA~emLkl~L~~ar~-lgi~~Vlvtcd~dN~ASrkvI 149 (174)
T COG3981 84 INLRHQLNDFLLEEGGHIG-YSVRPSERRKGYAKEMLKLALEKARE-LGIKKVLVTCDKDNIASRKVI 149 (174)
T ss_pred EEeeeecchHHHhcCCccc-ceeChhhhccCHHHHHHHHHHHHHHH-cCCCeEEEEeCCCCchhhHHH
Confidence 97654433111 024454 68999999999999999999999999 999999999999999998753
No 55
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=99.03 E-value=3.1e-09 Score=61.10 Aligned_cols=63 Identities=24% Similarity=0.331 Sum_probs=52.2
Q ss_pred EEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEE
Q 031082 86 HVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDL 151 (166)
Q Consensus 86 ~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l 151 (166)
+++. .+++++|++.+..... .....++..++|+|+|||+|+|++++..+++++++ .+++.+.+
T Consensus 2 ~~~~-~~~~~ig~~~~~~~~~-~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~ 64 (65)
T cd04301 2 LVAE-DDGEIVGFASLSPDGS-GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARE-RGAKRLRL 64 (65)
T ss_pred EEEe-cCCEEEEEEEEEecCC-CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHH-cCCcEEEe
Confidence 3455 4789999998776653 12247889999999999999999999999999999 89988876
No 56
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.98 E-value=3e-09 Score=78.06 Aligned_cols=78 Identities=22% Similarity=0.219 Sum_probs=63.0
Q ss_pred CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhh
Q 031082 83 DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIK 162 (166)
Q Consensus 83 ~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~ 162 (166)
...+..+ .+|+||+.+.....+... +.|..++++|+|||+|+|+.|+.++....-+ .|. .-.|.+..+|+.|.+
T Consensus 177 ~~~~f~~-~d~~iVa~A~t~a~~~~~---~~I~gV~T~peyR~kGyAt~lva~L~~~lL~-eGk-~~~L~~~~~N~~A~~ 250 (268)
T COG3393 177 SRTYFLE-GDGKIVAKAETAAENPAY---AQINGVYTHPEYRGKGYATALVATLAAKLLA-EGK-IPCLFVNSDNPVARR 250 (268)
T ss_pred eeEEEEc-cCCcEEEeeeccccCCcc---eEEEEEEcCHHHccccHHHHHHHHHHHHHHh-CCC-eeEEEEecCCHHHHH
Confidence 3344444 367999999766665554 8999999999999999999999999888777 564 556778899999999
Q ss_pred cccC
Q 031082 163 ISDM 166 (166)
Q Consensus 163 ~Y~k 166 (166)
+|+|
T Consensus 251 iY~r 254 (268)
T COG3393 251 IYQR 254 (268)
T ss_pred HHHH
Confidence 9986
No 57
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.96 E-value=3.4e-09 Score=81.71 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=60.1
Q ss_pred CCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhh
Q 031082 82 PDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAI 161 (166)
Q Consensus 82 ~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~ 161 (166)
.+.++++. .+|++||++.+.. ..|..++|+|+|||+|+|++|+.++++.+++ .|+..+.+.+.+.| .
T Consensus 30 ~d~~vv~~-~~~~lVg~g~l~g--------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~-~G~~~l~l~Tk~~~---~ 96 (332)
T TIGR00124 30 LEIFIAVY-EDEEIIGCGGIAG--------NVIKCVAIDESLRGEGLALQLMTELENLAYE-LGRFHLFIFTKPEY---A 96 (332)
T ss_pred CCEEEEEE-ECCEEEEEEEEec--------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEECchH---H
Confidence 35677777 4899999997632 2378999999999999999999999999999 99999999987655 4
Q ss_pred hcccC
Q 031082 162 KISDM 166 (166)
Q Consensus 162 ~~Y~k 166 (166)
+||+|
T Consensus 97 ~fy~k 101 (332)
T TIGR00124 97 ALFEY 101 (332)
T ss_pred HHHHH
Confidence 67864
No 58
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.91 E-value=2.6e-08 Score=69.90 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=60.4
Q ss_pred CeEEEEEEEEEecC-CCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 93 NRIMGYIMGKVEGQ-GESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 93 ~~ivG~~~~~~~~~-~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+++||.+.+..... ... ......+.+.|+|+|+|+|+..+..+++++.+..++.++.+.+.+.|.+|+++++|
T Consensus 77 ~~~iG~~~~~~~~~~~~~-~~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek 150 (187)
T COG1670 77 GELIGVIGLSDIDRAANG-DLAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEK 150 (187)
T ss_pred CeEEEEEEEEEecccccc-ceEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHH
Confidence 58999997765442 011 13344567799999999999999999999999889999999999999999999876
No 59
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.84 E-value=3.7e-08 Score=67.90 Aligned_cols=116 Identities=10% Similarity=-0.052 Sum_probs=75.8
Q ss_pred eEEEEcc--cccHHHHHHHHhhhcCCCcc--hHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEe
Q 031082 44 TTIRRFC--CNDLLRFTSVNLDHLTETFN--MSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTV 119 (166)
Q Consensus 44 ~~ir~~~--~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V 119 (166)
+.+.++. ++-+++..+|.+..|+.... ...+.+.-+..+-..++......++||-..+..... .....++..+.|
T Consensus 13 l~~vPiH~rPELlk~~~~LIN~eWPRS~TsR~hSL~~ScDs~P~sL~Ll~E~~~~VigH~rLS~i~n-~~~al~VEsVVV 91 (225)
T KOG3397|consen 13 LFFVPLHDRPELLKESMTLINSEWPRSDTSREHSLKKSCDSPPMSLLLLNEENDEVLGHSRLSHLPN-RDHALWVESVVV 91 (225)
T ss_pred ceeEeccccHHHHHHHHHHHhccCCccchhhhhhhhcccCCCCeeeeeecccccceeeeeccccCCC-CCceeEEEEEEE
Confidence 4555543 34455555666666553322 122332222222233333324677899886544332 122478999999
Q ss_pred CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 120 SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
+.+.||+|.|+.||+.++.++++ .|++.++|.+.. -.+||+
T Consensus 92 ~k~~RG~GFGk~lMk~~E~~~R~-~gf~~~yLsT~D----Q~~FYe 132 (225)
T KOG3397|consen 92 KKDQRGLGFGKFLMKSTEKWMRE-KGFNEAYLSTDD----QCRFYE 132 (225)
T ss_pred ehhhccccHHHHHHHHHHHHHHH-hhhhheeeeccc----chhhhh
Confidence 99999999999999999999999 999999998764 357776
No 60
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.70 E-value=6.3e-08 Score=64.91 Aligned_cols=114 Identities=16% Similarity=0.053 Sum_probs=74.7
Q ss_pred EEEcccccHHHHHHHHhhhcC----CCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCc
Q 031082 46 IRRFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSP 121 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p 121 (166)
+...+..++-++.+|+.+.|. -+|++-.=. .+.....++++-. .+|++++|+.+......... ..|..+.|.|
T Consensus 10 ~~~Lt~~ely~LlkLRv~VFVVEQ~CPY~E~Dg~-Dl~~~~~Hl~~~~-~~g~LvAyaRLl~~~~~~~~-~~iGRV~v~~ 86 (155)
T COG2153 10 FNDLTVRELYELLKLRVDVFVVEQNCPYPELDGK-DLLGDTRHLLGWT-PDGELVAYARLLPPGAEYEE-VSIGRVIVSP 86 (155)
T ss_pred hhhcCHHHHHHHHHhheeEEEEecCCCCcCcCCc-ccccccceEEEEc-CCCeEEEEEecCCCCCCcCc-eeeeeEEECH
Confidence 344566667777778877775 234321101 1112234455444 59999999976555442222 5699999999
Q ss_pred chhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 122 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
++||+|+|.+||..+++.+.++..-+.++|.... -.+.||.
T Consensus 87 ~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQa---hLq~fYa 127 (155)
T COG2153 87 AARGQGLGQQLMEKALETAGREWPDKPVYLGAQA---HLQDFYA 127 (155)
T ss_pred hhhccchhHHHHHHHHHHHHhhCCCCCeEEehHH---HHHHHHH
Confidence 9999999999999999999994445566665443 3555553
No 61
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.64 E-value=1.8e-07 Score=76.14 Aligned_cols=79 Identities=9% Similarity=0.156 Sum_probs=58.3
Q ss_pred eEEEEE-c-CCCeEEEEEEEEEecCCC-----ceeEEEeEEE-----------eCcchhcccHHHHHHHHHHHHHHhhcC
Q 031082 84 YFHVAE-G-PGNRIMGYIMGKVEGQGE-----SWHGHVTAVT-----------VSPEYRRQQLAKKLMNLLEDISDKIDK 145 (166)
Q Consensus 84 ~~~v~~-~-~~~~ivG~~~~~~~~~~~-----~~~~~i~~l~-----------V~p~~rg~Gig~~Ll~~~~~~a~~~~g 145 (166)
..|+.. + .++.++|++.+....... ...++|..+. ++|+|||+|+|++||++++++|++ .|
T Consensus 412 e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~-~G 490 (522)
T TIGR01211 412 EFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAE-EG 490 (522)
T ss_pred eEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHH-CC
Confidence 445444 2 247899999877554311 1124455554 359999999999999999999999 99
Q ss_pred cEEEEEEeecCChhhhhcccC
Q 031082 146 AYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 146 ~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+..+.+.. |..|++||+|
T Consensus 491 ~~~i~v~s---~~~A~~FY~k 508 (522)
T TIGR01211 491 SEKILVIS---GIGVREYYRK 508 (522)
T ss_pred CCEEEEee---CchHHHHHHH
Confidence 99998743 7799999985
No 62
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.62 E-value=6.6e-07 Score=54.73 Aligned_cols=54 Identities=22% Similarity=0.239 Sum_probs=43.7
Q ss_pred EEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcE
Q 031082 88 AEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAY 147 (166)
Q Consensus 88 ~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~ 147 (166)
+. .+|+.+|++.+...+. ...|....|.|++||||+|++|++.+++++++ .|.+
T Consensus 4 ~~-~~g~~~a~l~Y~~~~~----~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~-~~~k 57 (78)
T PF14542_consen 4 LK-DDGEEIAELTYREDGG----VIVITHTEVPPELRGQGIAKKLVEAALDYARE-NGLK 57 (78)
T ss_dssp EE-SSTTEEEEEEEEESSS----EEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHH-TT-E
T ss_pred EE-ECCEEEEEEEEEeCCC----EEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCE
Confidence 44 3688999998766333 37789999999999999999999999999999 7764
No 63
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.52 E-value=1.8e-07 Score=57.99 Aligned_cols=66 Identities=23% Similarity=0.246 Sum_probs=56.9
Q ss_pred cCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 90 GPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 90 ~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
+.+|++|.++..... +.+..-++.|+|||||+.+.++....+.+.+ +|+ -++..|.++|+.++++-
T Consensus 5 gpeG~PVSW~lmdqt-------ge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~-~g~-P~Y~hv~~~N~~~~r~~ 70 (89)
T PF08444_consen 5 GPEGNPVSWSLMDQT-------GEMRMGYTLPEYRGQGLMSQVMYHLAQYLHK-LGF-PFYGHVDEDNEASQRLS 70 (89)
T ss_pred CCCCCEeEEEEeccc-------ccccccccCHhHhcCCHHHHHHHHHHHHHHH-CCC-CeEeehHhccHHHHHHH
Confidence 468999988864443 5578889999999999999999999999999 888 57999999999998764
No 64
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.49 E-value=1.8e-06 Score=61.68 Aligned_cols=71 Identities=17% Similarity=0.203 Sum_probs=50.3
Q ss_pred chHHHHHHhccCCCeEEEEEcCCC--eEEEEEEEEEecCCCc----------------------------------eeEE
Q 031082 70 NMSFYMTYLARWPDYFHVAEGPGN--RIMGYIMGKVEGQGES----------------------------------WHGH 113 (166)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v~~~~~~--~ivG~~~~~~~~~~~~----------------------------------~~~~ 113 (166)
++.++....+.+....|++. .++ +++|.+.+..++.-.. ....
T Consensus 14 sPnDL~~LlDaP~h~l~~l~-~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~R 92 (196)
T PF13718_consen 14 SPNDLQLLLDAPNHRLFVLL-QPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGAR 92 (196)
T ss_dssp -HHHHHHHHH-TTEEEEEEE--SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEE
T ss_pred CHHHHHHHhcCCcceeehhc-cCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhccee
Confidence 35666666677677788888 477 9999998877754110 0267
Q ss_pred EeEEEeCcchhcccHHHHHHHHHHHHHH
Q 031082 114 VTAVTVSPEYRRQQLAKKLMNLLEDISD 141 (166)
Q Consensus 114 i~~l~V~p~~rg~Gig~~Ll~~~~~~a~ 141 (166)
|..|+|+|++|++|||+++++.+++++.
T Consensus 93 IvRIAvhP~~q~~G~Gs~lL~~l~~~~~ 120 (196)
T PF13718_consen 93 IVRIAVHPDLQRMGYGSRLLQQLEQYAE 120 (196)
T ss_dssp EEEEEE-CCC-SSSHHHHHHHHHHHT--
T ss_pred EEEEEEChhhhcCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999993
No 65
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.48 E-value=1.7e-07 Score=63.47 Aligned_cols=122 Identities=13% Similarity=0.135 Sum_probs=84.8
Q ss_pred ceeEEEEcccccHHHHHHHHhhhcCCCcc--hHHHHHHhccCCCeEEEEEc--------CCCeEEEEEEEEEecC-----
Q 031082 42 KMTTIRRFCCNDLLRFTSVNLDHLTETFN--MSFYMTYLARWPDYFHVAEG--------PGNRIMGYIMGKVEGQ----- 106 (166)
Q Consensus 42 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~--------~~~~ivG~~~~~~~~~----- 106 (166)
.++.||+.-.+|.+++..|....|++... .+.+.+.+.+.+..+....+ ..+.+||.++....+.
T Consensus 10 ~~~~irp~i~e~~q~~~~Lea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~lt~ 89 (190)
T KOG4144|consen 10 EAPRIRPGIPESCQRRHTLEASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERLTQ 89 (190)
T ss_pred ccccCCCCChHHHHHHhccccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcchhhhH
Confidence 34679999999999999999999986543 33355555554443221111 3688999997654432
Q ss_pred -------CCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 107 -------GESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 107 -------~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
...-...|+.++|+|+||.+|+|+.|+...++...++.-.+++.|.+. ++-+.||++
T Consensus 90 ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h---~pLvPFYEr 153 (190)
T KOG4144|consen 90 ESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICH---DPLVPFYER 153 (190)
T ss_pred HHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeec---CCccchhHh
Confidence 111237899999999999999999999998777776344456666654 368888874
No 66
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.41 E-value=1.3e-05 Score=53.04 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=49.6
Q ss_pred cCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEE
Q 031082 80 RWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLF 152 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~ 152 (166)
.....+|.+.+ |+.++|-+.+..... ...+..++|++--||+|+|+.|++.+.+.+. ++...++.
T Consensus 35 ~~~~~l~aArF-NdRlLgAv~v~~~~~----~~~L~~l~VRevTRrRGVG~yLlee~~rq~p---~i~~w~l~ 99 (128)
T PF12568_consen 35 DEGHRLFAARF-NDRLLGAVKVTISGQ----QAELSDLCVREVTRRRGVGLYLLEEVLRQLP---DIKHWWLA 99 (128)
T ss_dssp -SSEEEEEEEE-TTEEEEEEEEEEETT----EEEEEEEEE-TT-SSSSHHHHHHHHHHHHS----S--EEEE-
T ss_pred ccCCeEEEEEe-chheeeeEEEEEcCc----ceEEeeEEEeeccccccHHHHHHHHHHHHCC---CCcEEEEe
Confidence 34567888885 999999998888765 3889999999999999999999999999884 46666664
No 67
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=98.37 E-value=2.7e-06 Score=54.12 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=52.3
Q ss_pred CCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEE
Q 031082 81 WPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFV 149 (166)
Q Consensus 81 ~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i 149 (166)
.....+++. .+|+.+|.+.....+.+. ..|..-.|.+++||||+|++|++++++.+++ .|.+-+
T Consensus 13 ~~~~~y~~~-~~G~~~~e~~y~~~~~~~---i~i~HT~V~d~lrGqGia~~L~~~al~~ar~-~g~kii 76 (99)
T COG2388 13 GENGRYVLT-DEGEVIGEATYYDRGENL---IIIDHTYVPDELRGQGIAQKLVEKALEEARE-AGLKII 76 (99)
T ss_pred cCceEEEEe-cCCcEEEEEEEecCCCCE---EEEecCcCCHHHcCCcHHHHHHHHHHHHHHH-cCCeEc
Confidence 345677777 489899999776666543 7889999999999999999999999999999 776443
No 68
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=98.30 E-value=7.7e-06 Score=53.16 Aligned_cols=70 Identities=13% Similarity=0.088 Sum_probs=51.7
Q ss_pred CCeEEEEEEEEEecCCCc-eeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 92 GNRIMGYIMGKVEGQGES-WHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 92 ~~~ivG~~~~~~~~~~~~-~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|.+||++.+........ -.-.+..+++...|||+|+|++..+++....+- ...+-+..+|.+|++|++|
T Consensus 45 ~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~g-----~w~Va~i~EN~PA~~fwK~ 115 (143)
T COG5628 45 GGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAWG-----VWQVATVRENTPARAFWKR 115 (143)
T ss_pred CCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhhc-----eEEEEEeccCChhHHHHHh
Confidence 799999996543332110 012377889999999999999999999877644 3445677899999999875
No 69
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.22 E-value=1.5e-05 Score=59.65 Aligned_cols=109 Identities=15% Similarity=0.105 Sum_probs=62.8
Q ss_pred eEEEEcccccHHHHHHH-HhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcc
Q 031082 44 TTIRRFCCNDLLRFTSV-NLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPE 122 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 122 (166)
+.|++++++.++....- +...+...|. .....+.. ..-|++. .+|+||+.|......+. ..=..|.++|+
T Consensus 129 y~l~~Ide~l~~~~~~e~~s~d~~~~~~--s~e~Fl~~--G~Gf~i~-~~~~iVs~~~s~~~~~~----~~EI~I~T~~~ 199 (265)
T PF12746_consen 129 YELKRIDEELYENSLEEEWSEDLVSQFS--SYEDFLKN--GFGFCIL-HDGEIVSGCSSYFVYEN----GIEIDIETHPE 199 (265)
T ss_dssp CEEEE--HHHHHHHHHSCCCGGGTTTSS--SHHHHHHH----EEEEE-ETTEEEEEEEEEEEETT----EEEEEEEE-CC
T ss_pred eEEEECCHHHHHhhhhhHhHHHHHHhcC--CHHHHHhc--CcEEEEE-ECCEEEEEEEEEEEECC----EEEEEEEECHH
Confidence 66777777666655421 1111222221 12222222 3345555 37888877644333332 22345899999
Q ss_pred hhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 123 YRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 123 ~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
|||||+|+.+...++..+.+ +|....| ++ .|.+++++=+
T Consensus 200 yR~kGLA~~~aa~~I~~Cl~-~~l~P~W-Dc--~N~~S~~lA~ 238 (265)
T PF12746_consen 200 YRGKGLATAVAAAFILECLE-NGLYPSW-DC--HNLASIALAE 238 (265)
T ss_dssp CTTSSHHHHHHHHHHHHHHH-TT-EEE--EE--SSHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHH-CCCCcCe-eC--CCHHHHHHHH
Confidence 99999999999999999999 8876644 33 6888887643
No 70
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=98.14 E-value=4.6e-05 Score=58.79 Aligned_cols=96 Identities=14% Similarity=0.064 Sum_probs=57.0
Q ss_pred eeEEEEcccccHHHHHHHHhhhcC--C--CcchHHHHHHh-----------cc---CCCeEEEEEc-CCCeEEEEEEEEE
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLT--E--TFNMSFYMTYL-----------AR---WPDYFHVAEG-PGNRIMGYIMGKV 103 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~--~--~~~~~~~~~~~-----------~~---~~~~~~v~~~-~~~~ivG~~~~~~ 103 (166)
|+.||+++.+|++++..|....-+ . +-+.+.+.+.+ .. +..++||.+| ..|+++|++.+..
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a 80 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEA 80 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEES
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEe
Confidence 578999999999999999876543 1 22222222222 11 2236788886 3699999986532
Q ss_pred ecCCC---------------------------------ceeEEEeEEEeCcchhcccHHHHHHHHHHH
Q 031082 104 EGQGE---------------------------------SWHGHVTAVTVSPEYRRQQLAKKLMNLLED 138 (166)
Q Consensus 104 ~~~~~---------------------------------~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~ 138 (166)
.-... .-...|..++++|+||+.|.|+.|-+.-+=
T Consensus 81 ~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfL 148 (342)
T PF04958_consen 81 AVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFL 148 (342)
T ss_dssp STTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHH
T ss_pred ccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHH
Confidence 21100 001679999999999999999999876533
No 71
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=98.14 E-value=0.00016 Score=48.38 Aligned_cols=104 Identities=15% Similarity=0.108 Sum_probs=75.2
Q ss_pred eEEEE-cccccHHHHHHHHhhhcC-------CCcchHHHHHHhccC----CCeEEEEEcCCCeEEEEEEEEEecCCCcee
Q 031082 44 TTIRR-FCCNDLLRFTSVNLDHLT-------ETFNMSFYMTYLARW----PDYFHVAEGPGNRIMGYIMGKVEGQGESWH 111 (166)
Q Consensus 44 ~~ir~-~~~~D~~~i~~l~~~~~~-------~~~~~~~~~~~~~~~----~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~ 111 (166)
+.++. .+++|++.+.++....+. .+....++.+.+... .-.++++. .+|++||+.......+ .
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~g~~va~~~~~~~~~----~ 94 (142)
T PF13480_consen 20 VRFEVATDPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLY-DGGEPVAFALGFRHGG----T 94 (142)
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEE-ECCEEEEEEEEEEECC----E
Confidence 44444 357788888887744322 233455555554432 23456666 4899999997766655 2
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEe
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFV 153 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v 153 (166)
.+....+++|+++..+.|..|+..+++++.+ .|++.+.+..
T Consensus 95 ~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~-~g~~~~d~g~ 135 (142)
T PF13480_consen 95 LYYWYGGYDPEYRKYSPGRLLLWEAIRWAIE-RGLRYFDFGG 135 (142)
T ss_pred EEEEEEEECHhhHhCCHHHHHHHHHHHHHHH-CCCCEEEECC
Confidence 6778888999999999999999999999999 9998888765
No 72
>PRK10456 arginine succinyltransferase; Provisional
Probab=98.00 E-value=0.00012 Score=56.36 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=62.9
Q ss_pred eeEEEEcccccHHHHHHHHhhhcC----CCcchHHHHHHhc------------cCCCeEEEEEc-CCCeEEEEEEEEEec
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYLA------------RWPDYFHVAEG-PGNRIMGYIMGKVEG 105 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~------------~~~~~~~v~~~-~~~~ivG~~~~~~~~ 105 (166)
|+.||++..+|++++.+|....-+ -+-+.+.+.++++ ....++||.+| ..|+++|++.+...-
T Consensus 1 M~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 80 (344)
T PRK10456 1 MMVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAV 80 (344)
T ss_pred CeEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEecc
Confidence 578999999999999999876543 1222333333221 12346788886 358999998653221
Q ss_pred C-CCc--------------------------------eeEEEeEEEeCcchhcccHHHHHHHHH
Q 031082 106 Q-GES--------------------------------WHGHVTAVTVSPEYRRQQLAKKLMNLL 136 (166)
Q Consensus 106 ~-~~~--------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~ 136 (166)
. +.. -...|..++++|+||+-|.|+.|-+.-
T Consensus 81 G~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~R 144 (344)
T PRK10456 81 GLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSR 144 (344)
T ss_pred cCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHH
Confidence 1 000 015689999999999999999887654
No 73
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=97.91 E-value=5.2e-05 Score=51.26 Aligned_cols=123 Identities=8% Similarity=0.121 Sum_probs=79.5
Q ss_pred eEEEEcccccHHHHHHHHhh------hcCCCcchHH--HH--HHhccCCCeEEEEEcC----C-----CeEEEEEEEEEe
Q 031082 44 TTIRRFCCNDLLRFTSVNLD------HLTETFNMSF--YM--TYLARWPDYFHVAEGP----G-----NRIMGYIMGKVE 104 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~------~~~~~~~~~~--~~--~~~~~~~~~~~v~~~~----~-----~~ivG~~~~~~~ 104 (166)
+.+-|..+-..+...++... ...++...+. -. ..-++.+...|++.+. . +-.||-+.....
T Consensus 14 vILVPYe~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNlFlt 93 (185)
T KOG4135|consen 14 VILVPYEPCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNLFLT 93 (185)
T ss_pred EEEeeccccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhcccCchhHhhhccceeeEEe
Confidence 45677777777766665422 2223332211 11 1112334555655431 1 225776643322
Q ss_pred c-CC------CceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 105 G-QG------ESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 105 ~-~~------~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
. .+ ....+.+.-+.-.|.-||+|+|+..+.+++.++...+++.+..+-+..+|.++++||+|
T Consensus 94 ~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk 162 (185)
T KOG4135|consen 94 TSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKK 162 (185)
T ss_pred cCCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHH
Confidence 2 22 23346777777889999999999999999999999778999999999999999999976
No 74
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=97.85 E-value=6e-05 Score=49.91 Aligned_cols=116 Identities=16% Similarity=0.088 Sum_probs=76.6
Q ss_pred eeEEEEcccccHHHHHHHHhhhcCC-CcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEe------------cCCCc
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLTE-TFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVE------------GQGES 109 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~------------~~~~~ 109 (166)
++.++.....|.+++..|.++.-.+ .|.+-.....+.. ..|+++ .+|.+.|+....-. .+...
T Consensus 7 p~~~~D~~apd~aavLaLNNeha~elswLe~erL~~l~~---eAF~Ar-R~G~l~afl~tFd~~a~ydSpNFlWFrErYe 82 (167)
T COG3818 7 PILIRDVRAPDLAAVLALNNEHALELSWLELERLYRLYK---EAFVAR-RDGNLAAFLVTFDSSARYDSPNFLWFRERYE 82 (167)
T ss_pred ceehhhhcCCchhhHHhccchhhhhccccCHHHHHHHHH---HHHHHh-hccchhhheeeccccccCCCCceeehhhhCC
Confidence 3567777888999999988665432 3332211112211 114566 46777666632111 11122
Q ss_pred eeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec--CChhhhhc
Q 031082 110 WHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA--SNTPAIKI 163 (166)
Q Consensus 110 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~--~N~~a~~~ 163 (166)
.-.+|..+.|....||+|+|+.|.+.+.++++. .|+..+..+|.. -|+++-.|
T Consensus 83 ~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~-agy~~~tCEVn~DppnpasdaF 137 (167)
T COG3818 83 NFFYVDRVVVASRARGRGVARALYADLFSYAEL-AGYPYLTCEVNLDPPNPASDAF 137 (167)
T ss_pred ceEEEEEEEEEecccccchHHHHHHHHHHHHHh-cCCceEEEEecCCCCChHHHHH
Confidence 237899999999999999999999999999999 999999888754 45555554
No 75
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.85 E-value=1.7e-05 Score=50.18 Aligned_cols=30 Identities=23% Similarity=0.342 Sum_probs=28.5
Q ss_pred EEeCcchhcccHHHHHHHHHHHHHHhhcCcE
Q 031082 117 VTVSPEYRRQQLAKKLMNLLEDISDKIDKAY 147 (166)
Q Consensus 117 l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~ 147 (166)
++|+|++||+|+|++|++.++++++. .|+.
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~-~g~~ 116 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARK-RGIS 116 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHH-cCce
Confidence 99999999999999999999999999 7775
No 76
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.80 E-value=0.00045 Score=51.94 Aligned_cols=99 Identities=13% Similarity=0.109 Sum_probs=70.4
Q ss_pred eEEEEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcch
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEY 123 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 123 (166)
+.+..+..+|...+..+.+....+.. .++.+-+.+.++..+++++|+++.+.- --|..++|+|.+
T Consensus 4 ~~~~~v~~~e~~k~~~i~~fL~~~~l-------~~d~~ve~~v~~~~~~~~iiacGsiaG--------nvikcvAvs~s~ 68 (352)
T COG3053 4 YTFSRVKRSEKKKMAEIAEFLHQNDL-------RVDTTVEYFVAIYRDNEEIIACGSIAG--------NVIKCVAVSESL 68 (352)
T ss_pred eEEEEEccchhhHHHHHHHHHhhcCc-------eecccceEEEEEEcCCCcEEEeccccc--------ceeEEEEechhc
Confidence 56777777777666655433221111 112223445555545699999985432 226789999999
Q ss_pred hcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 124 RRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 124 rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
||.|++-+|+.++++.+.+ +|...+.+.+-+.+.
T Consensus 69 qGeGl~lkl~TeLin~ay~-~g~~hLFiyTKp~~~ 102 (352)
T COG3053 69 QGEGLALKLVTELINLAYE-RGRTHLFIYTKPEYA 102 (352)
T ss_pred ccccHHHHHHHHHHHHHHH-cCCceEEEEechhHH
Confidence 9999999999999999999 999999999877664
No 77
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.77 E-value=0.0046 Score=42.60 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=68.7
Q ss_pred eecCCCceeEEEEcc---cccHHHHHHHHhhhcCC--------CcchHHHHHHhccCC---C-eEEEEEcCCCeEEEEEE
Q 031082 36 FVPNSRKMTTIRRFC---CNDLLRFTSVNLDHLTE--------TFNMSFYMTYLARWP---D-YFHVAEGPGNRIMGYIM 100 (166)
Q Consensus 36 ~~~~~~~~~~ir~~~---~~D~~~i~~l~~~~~~~--------~~~~~~~~~~~~~~~---~-~~~v~~~~~~~ivG~~~ 100 (166)
.+|++ +....++ +++++++.++..+.+.+ .|+.+|+.-.+..+. . ++-|-....+++|||+.
T Consensus 19 ~LP~g---F~W~~~dl~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIs 95 (162)
T PF01233_consen 19 PLPDG---FEWSTLDLNDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFIS 95 (162)
T ss_dssp --STT---EEEEE--TTSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEE
T ss_pred CCCCC---CEEEecCCCCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEc
Confidence 34554 5555554 45567777777666542 355666665555422 1 23333335799999996
Q ss_pred EEEec----CCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEE
Q 031082 101 GKVEG----QGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDL 151 (166)
Q Consensus 101 ~~~~~----~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l 151 (166)
+.... +......+|..++||+++|.++++--|++++-+++.. .|+-+..-
T Consensus 96 aip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~-~gI~qAvy 149 (162)
T PF01233_consen 96 AIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNL-QGIWQAVY 149 (162)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHT-TT--EEEE
T ss_pred cceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhh-cCceeeee
Confidence 53332 2233457899999999999999999999999999998 77655443
No 78
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.76 E-value=0.00035 Score=59.09 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=51.4
Q ss_pred hHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCC--------------ce-------------------eEEEeEE
Q 031082 71 MSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGE--------------SW-------------------HGHVTAV 117 (166)
Q Consensus 71 ~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~--------------~~-------------------~~~i~~l 117 (166)
+..+....+.+.+.++++.-.++.+|+.+.+..++... ++ ...|..|
T Consensus 458 P~DL~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvRI 537 (758)
T COG1444 458 PNDLRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVRI 537 (758)
T ss_pred HHHHHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEEE
Confidence 44455555555567787774344788777665554320 00 1469999
Q ss_pred EeCcchhcccHHHHHHHHHHHHHHh
Q 031082 118 TVSPEYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 118 ~V~p~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
+|+|++|++|||+++++.+.+++++
T Consensus 538 AvhPe~q~~GiGsrlL~~l~~~a~~ 562 (758)
T COG1444 538 AVHPELQRMGIGSRLLALLIEEARK 562 (758)
T ss_pred EeCHHHHhcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999964
No 79
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.67 E-value=0.00092 Score=48.38 Aligned_cols=113 Identities=15% Similarity=0.016 Sum_probs=80.6
Q ss_pred EEEE-cccccHHHHHHHHhhhcCCCcchHHHHH---HhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeC
Q 031082 45 TIRR-FCCNDLLRFTSVNLDHLTETFNMSFYMT---YLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVS 120 (166)
Q Consensus 45 ~ir~-~~~~D~~~i~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~ 120 (166)
.+|. ..+.++++..++....+........... .+......++-+...++++||......-.......-+=+.++|.
T Consensus 4 vvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~ 83 (266)
T COG3375 4 VVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIRALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVR 83 (266)
T ss_pred eEEecCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHhcCCeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhcc
Confidence 3444 4578888888888888764433333333 33444566677775567999999665522111112445778999
Q ss_pred cchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 121 PEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 121 p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
|+++++|+|-+|-.+--+++.. .|+..|..+.++-|.
T Consensus 84 e~~k~sglg~aLK~~Qre~a~~-~G~tli~WTfDPl~a 120 (266)
T COG3375 84 EEVKGSGLGVALKMKQRERALS-MGYTLIAWTFDPLNA 120 (266)
T ss_pred ccccccchhhhhHHHHHHHHHh-cCeeeEEEecccchh
Confidence 9999999999999999999999 999999999888764
No 80
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.64 E-value=0.00035 Score=53.79 Aligned_cols=77 Identities=13% Similarity=-0.003 Sum_probs=58.0
Q ss_pred CeEEEEEcCCCeEEEEEEEE----EecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 83 DYFHVAEGPGNRIMGYIMGK----VEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 83 ~~~~v~~~~~~~ivG~~~~~----~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
...++.. .+.++++-.... ..+....+.+.|..+++.|+|||+|..++|+.+.++..++ .|+....|.-
T Consensus 39 ~n~~vi~-~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~-kG~p~s~L~P----- 111 (389)
T COG4552 39 PNSYVIY-MNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIAR-KGYPVSALHP----- 111 (389)
T ss_pred CcceEEe-ehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHH-cCCeeEEecc-----
Confidence 4455566 377888777432 2233444557899999999999999999999999999999 9998877753
Q ss_pred hhhhcccC
Q 031082 159 PAIKISDM 166 (166)
Q Consensus 159 ~a~~~Y~k 166 (166)
.+.+||+|
T Consensus 112 ~s~~iYrK 119 (389)
T COG4552 112 FSGGIYRK 119 (389)
T ss_pred CchhhHhh
Confidence 35677765
No 81
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=97.54 E-value=0.0014 Score=50.59 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=60.3
Q ss_pred EEEcccccHHHHHHHHhhhcC----CCcchHHHHHHhc------------cCCCeEEEEEc-CCCeEEEEEEEEEecC-C
Q 031082 46 IRRFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYLA------------RWPDYFHVAEG-PGNRIMGYIMGKVEGQ-G 107 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~------------~~~~~~~v~~~-~~~~ivG~~~~~~~~~-~ 107 (166)
||++..+|++++.+|....-. -+.+.+.+.++++ .+..++||.+| ..|+++|++.+...-. +
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 799999999999999876542 1222333333221 12346788886 3589999986532211 0
Q ss_pred Cc--------------------------------eeEEEeEEEeCcchhcccHHHHHHHHH
Q 031082 108 ES--------------------------------WHGHVTAVTVSPEYRRQQLAKKLMNLL 136 (166)
Q Consensus 108 ~~--------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~ 136 (166)
.. -...|..++++|+||+.|.|+.|-+.-
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~R 142 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSR 142 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHH
Confidence 00 015789999999999999999887654
No 82
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=97.52 E-value=0.0015 Score=50.39 Aligned_cols=91 Identities=15% Similarity=0.134 Sum_probs=59.8
Q ss_pred EEEcccccHHHHHHHHhhhcC----CCcchHHHHHHh-----------c--cCCCeEEEEEc-CCCeEEEEEEEEEecC-
Q 031082 46 IRRFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYL-----------A--RWPDYFHVAEG-PGNRIMGYIMGKVEGQ- 106 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~-----------~--~~~~~~~v~~~-~~~~ivG~~~~~~~~~- 106 (166)
||+++.+|++++.++....-. -+-+.+.+.+++ . .+..++||.+| ..|+++|++.+...-.
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 799999999999999866542 122222222222 1 12346788886 3689999986532211
Q ss_pred CCc--------------------------------eeEEEeEEEeCcchhcccHHHHHHHHH
Q 031082 107 GES--------------------------------WHGHVTAVTVSPEYRRQQLAKKLMNLL 136 (166)
Q Consensus 107 ~~~--------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~ 136 (166)
+.. -...|..++++|+||+-|.|+.|-+.-
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~R 143 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRAR 143 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHH
Confidence 000 015789999999999999999887654
No 83
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=97.47 E-value=0.0019 Score=49.83 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=59.5
Q ss_pred EEEcccccHHHHHHHHhhhcC----CCcchHHHHHHh----------c--cCCCeEEEEEc-CCCeEEEEEEEEEecC-C
Q 031082 46 IRRFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYL----------A--RWPDYFHVAEG-PGNRIMGYIMGKVEGQ-G 107 (166)
Q Consensus 46 ir~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~----------~--~~~~~~~v~~~-~~~~ivG~~~~~~~~~-~ 107 (166)
||++..+|++++.+|....-+ -+-+.+.+.+++ . .+..++||.+| ..|+++|++.+...-. +
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 799999999999999866542 111222222111 1 13346788886 3589999986532211 0
Q ss_pred Cc--------------------------------eeEEEeEEEeCcchhcccHHHHHHHHH
Q 031082 108 ES--------------------------------WHGHVTAVTVSPEYRRQQLAKKLMNLL 136 (166)
Q Consensus 108 ~~--------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~ 136 (166)
.. -...|..++++|+||+.|.|+.|-+.-
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~R 142 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSR 142 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHH
Confidence 00 015789999999999999999887654
No 84
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.43 E-value=0.0042 Score=43.97 Aligned_cols=114 Identities=10% Similarity=-0.029 Sum_probs=63.6
Q ss_pred EEcccccHHHHHHHHhhhcCCCcchHHHHHHhccCC---CeEEEEEcCCCeEEEEEEEEEec----CCCceeEEEeEEEe
Q 031082 47 RRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWP---DYFHVAEGPGNRIMGYIMGKVEG----QGESWHGHVTAVTV 119 (166)
Q Consensus 47 r~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~ivG~~~~~~~~----~~~~~~~~i~~l~V 119 (166)
.....+.++++.++.-.. .-.+....+...-+..+ ...+++....+++|+.+...... ........++..++
T Consensus 8 ~NP~~e~~d~fmk~~g~~-r~~Fk~~Di~~wk~sf~~~Y~l~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~ 86 (181)
T PF06852_consen 8 INPPQEYFDQFMKLHGNE-RWNFKRNDIKLWKESFDDDYWLVLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWI 86 (181)
T ss_pred eCCCHHHHHHHHHHhcCC-cccccHHHHHHHHHhhccCeEEEEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeee
Confidence 334556677777776442 12222333443333333 33444443467788888553322 11244577899999
Q ss_pred CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 120 SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
+|+|||+|+++.+-+.+.+..+. .+-+ ..+. .+..+.++|.|
T Consensus 87 ~p~yRg~~~~kl~~~~~~~~~~~-~~~N-~~~~---~~~~~~~~w~k 128 (181)
T PF06852_consen 87 DPEYRGKGIMKLQDDICMDELDS-VDDN-SVAQ---GNVKMSNFWHK 128 (181)
T ss_pred CCcccCcchHHHHHHHHHHHhcc-CCCc-eeee---cCHHHHHHHHH
Confidence 99999999997555555555544 3333 3332 34467777653
No 85
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=97.42 E-value=0.0015 Score=42.76 Aligned_cols=79 Identities=10% Similarity=0.136 Sum_probs=47.0
Q ss_pred CCeEEEEEcC----CCeEEEEEEE------EEecCCCc----eeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcE
Q 031082 82 PDYFHVAEGP----GNRIMGYIMG------KVEGQGES----WHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAY 147 (166)
Q Consensus 82 ~~~~~v~~~~----~~~ivG~~~~------~~~~~~~~----~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~ 147 (166)
.+..++..+. .+.++|+.-+ ..+..... ....|.+++|++..|++|+|++|++.+++.- +..
T Consensus 3 ~~~~Yll~d~~~~~~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e----~~~ 78 (120)
T PF05301_consen 3 DQVLYLLKDSEAGGKGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEE----NVS 78 (120)
T ss_pred ceEEEEEEecCCCCCceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHc----CCC
Confidence 3455666542 3568898822 22222111 1136788999999999999999999998763 333
Q ss_pred EEEEEeecCChhhhhcc
Q 031082 148 FVDLFVRASNTPAIKIS 164 (166)
Q Consensus 148 ~i~l~v~~~N~~a~~~Y 164 (166)
.-.+-++.-.+...+|.
T Consensus 79 p~~~a~DrPS~Kll~Fl 95 (120)
T PF05301_consen 79 PHQLAIDRPSPKLLSFL 95 (120)
T ss_pred cccceecCCcHHHHHHH
Confidence 33344443333344443
No 86
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=97.33 E-value=0.00036 Score=41.44 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=26.8
Q ss_pred eEEEeEEEeCcchhcccHHHHHHHHHHHHH
Q 031082 111 HGHVTAVTVSPEYRRQQLAKKLMNLLEDIS 140 (166)
Q Consensus 111 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a 140 (166)
.+-|..|.|+|.+|++|||++|++.+.+..
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 366899999999999999999999987764
No 87
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.91 E-value=0.019 Score=42.71 Aligned_cols=111 Identities=13% Similarity=0.034 Sum_probs=71.6
Q ss_pred eEEEEcc-cccHHHHHHHHhhhcCC--Ccc------hHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEec---------
Q 031082 44 TTIRRFC-CNDLLRFTSVNLDHLTE--TFN------MSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEG--------- 105 (166)
Q Consensus 44 ~~ir~~~-~~D~~~i~~l~~~~~~~--~~~------~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~--------- 105 (166)
+.++.+. ..+++++..++...|.+ .|. .....+.++....++++....+|++||++.+....
T Consensus 8 ~~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p 87 (241)
T TIGR03694 8 FEIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFP 87 (241)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEecccccccccccc
Confidence 4455554 45588999999888863 232 11122223332333444432358999999664321
Q ss_pred ---C---------------CCceeEEEeEEEeCcchhcc--------c--------------------HHHHHHHHHHHH
Q 031082 106 ---Q---------------GESWHGHVTAVTVSPEYRRQ--------Q--------------------LAKKLMNLLEDI 139 (166)
Q Consensus 106 ---~---------------~~~~~~~i~~l~V~p~~rg~--------G--------------------ig~~Ll~~~~~~ 139 (166)
. ......++..++|+|++|++ | +...|+..+.++
T Consensus 88 ~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 167 (241)
T TIGR03694 88 FEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIAL 167 (241)
T ss_pred HHHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHH
Confidence 0 01224678999999999974 2 567899999999
Q ss_pred HHhhcCcEEEEEEeec
Q 031082 140 SDKIDKAYFVDLFVRA 155 (166)
Q Consensus 140 a~~~~g~~~i~l~v~~ 155 (166)
+.+ .|++.++..+.+
T Consensus 168 a~~-~Gi~~~~~v~~~ 182 (241)
T TIGR03694 168 SSA-NGITHWYAIMEP 182 (241)
T ss_pred HHH-CCCcEEEEEeCH
Confidence 999 999998877665
No 88
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=96.89 E-value=0.0076 Score=38.44 Aligned_cols=60 Identities=13% Similarity=-0.023 Sum_probs=45.0
Q ss_pred CCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 92 GNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 92 ~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
++...|++++..... .....++..++|.|..||+|+|..|++.+.+.. +.+...+.++|+
T Consensus 16 ~e~y~~~aIvt~~~~-~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~------~~L~Wrsr~~n~ 75 (99)
T cd04264 16 SEGYNAAAIVTYEGV-NNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDF------PKLFWRSRKTNP 75 (99)
T ss_pred eCCceEEEEEeccCC-CCCceEEEEEEEchhhhhcChHHHHHHHHHhhC------CceEEEeCCCCc
Confidence 556777776655431 122489999999999999999999999887663 357778887775
No 89
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=96.88 E-value=0.042 Score=37.12 Aligned_cols=110 Identities=18% Similarity=0.301 Sum_probs=61.1
Q ss_pred eEEEEcccccHHHHHHHHhhh----------cCCC-----cchHH-HHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCC
Q 031082 44 TTIRRFCCNDLLRFTSVNLDH----------LTET-----FNMSF-YMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQG 107 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~----------~~~~-----~~~~~-~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~ 107 (166)
|.+|++++.|++.+..+.... +++. .+... -...+. ...+.|++.+.+|++.||+....-...
T Consensus 1 M~yR~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~-RsgHSFvA~~e~~~~~GfvLAQaVWQG 79 (161)
T PF09390_consen 1 MRYRPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYE-RSGHSFVAEDEGGELQGFVLAQAVWQG 79 (161)
T ss_dssp -EEE---GGGHHHHHHC--------------------STTS---HHHHHHHH-CCS--EEEE-ETTEEEEEEEEEEEE-S
T ss_pred CcccccCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhh-ccCCcEEEEccCCceeeeeehhHHhcC
Confidence 468999999999998873222 1111 00000 112222 357788888668999999977655444
Q ss_pred CceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecC
Q 031082 108 ESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRAS 156 (166)
Q Consensus 108 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~ 156 (166)
......+..|.+.|. +......-|+.++.+-|-. -++..+.+.+.+.
T Consensus 80 drptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYD-a~VYEv~l~l~p~ 126 (161)
T PF09390_consen 80 DRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYD-AGVYEVHLHLDPE 126 (161)
T ss_dssp SSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHH-TT-SEEEE---TH
T ss_pred CCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhc-cceEEEEeeCCHH
Confidence 444566676666554 4568888899999999999 8999999887763
No 90
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=96.85 E-value=0.074 Score=37.37 Aligned_cols=105 Identities=16% Similarity=0.097 Sum_probs=69.4
Q ss_pred cccc-cHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEec-CCCceeEEEeEEEeCcchhcc
Q 031082 49 FCCN-DLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEG-QGESWHGHVTAVTVSPEYRRQ 126 (166)
Q Consensus 49 ~~~~-D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~-~~~~~~~~i~~l~V~p~~rg~ 126 (166)
.+.- |.+.+.++.+..+...-....+.+.++.....+++.. ..-|.+++..+. ......+++..++|.+..||.
T Consensus 28 ~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~d~----~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~ 103 (170)
T PF04768_consen 28 LSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYVDE----DYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGS 103 (170)
T ss_dssp CCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEEET----TSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHT
T ss_pred ccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEEeC----CceEEEEEEecCCCCCCCCeEEEEEEecchhhhc
Confidence 4444 8999999999999655566667777776566666543 333444443322 223346899999999999999
Q ss_pred cHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 127 QLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 127 Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
|++..+.+.+.+...+ +...+.++|+ -.++|
T Consensus 104 gv~D~vf~~i~~d~p~------L~Wrsr~~n~-~~~Wy 134 (170)
T PF04768_consen 104 GVADNVFNAIRKDFPK------LFWRSREDNP-NNKWY 134 (170)
T ss_dssp THHHHHHHHHHHH-SS------EEEEEETT-T-THHHH
T ss_pred CHHHHHHHHHHHhccc------eEEEecCCCC-cccEE
Confidence 9999999999655433 7788888774 55555
No 91
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=96.73 E-value=0.021 Score=40.55 Aligned_cols=105 Identities=10% Similarity=0.071 Sum_probs=69.4
Q ss_pred cccccHHHHHHHHhhhcCC--CcchH----HHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecC----------------
Q 031082 49 FCCNDLLRFTSVNLDHLTE--TFNMS----FYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQ---------------- 106 (166)
Q Consensus 49 ~~~~D~~~i~~l~~~~~~~--~~~~~----~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~---------------- 106 (166)
+..++++++..++...|.+ .|... ...+.+++....++++.+ +|+++|++.+.....
T Consensus 5 ~~~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~-~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~ 83 (182)
T PF00765_consen 5 LSRRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALD-DGRVVGCARLLPTTGPYMLSDVFPHLLPDGP 83 (182)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEE-TTEEEEEEEEEETTS--HHHHCTGGGHTTS-
T ss_pred cCHHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEE-CCEEEEEeeeccCCCcchhhhHHHHHhCCCC
Confidence 3456788999999998874 35422 233344444445556664 799999997654432
Q ss_pred --CCceeEEEeEEEeCcchhc------ccHHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 107 --GESWHGHVTAVTVSPEYRR------QQLAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 107 --~~~~~~~i~~l~V~p~~rg------~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
.....-++..++|+++.++ .-+...|+..+.+++.+ .|++.+...+..
T Consensus 84 ~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~-~gi~~~v~V~~~ 139 (182)
T PF00765_consen 84 APRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALS-NGIRHIVGVVDP 139 (182)
T ss_dssp --SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHC-TT-SEEEEEEEH
T ss_pred CCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHH-CCCCEEEEEECh
Confidence 0012246899999998532 24788999999999999 999998887754
No 92
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=96.68 E-value=0.029 Score=40.68 Aligned_cols=106 Identities=6% Similarity=-0.094 Sum_probs=70.0
Q ss_pred cccccHHHHHHHHhhhcCC--Ccch----HHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecC----------------
Q 031082 49 FCCNDLLRFTSVNLDHLTE--TFNM----SFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQ---------------- 106 (166)
Q Consensus 49 ~~~~D~~~i~~l~~~~~~~--~~~~----~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~---------------- 106 (166)
...++++++..++...|.+ .|.. ....+.++.....+++..+.+|+++|++.+.....
T Consensus 13 ~~~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~ 92 (207)
T PRK13834 13 REASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGR 92 (207)
T ss_pred cCHHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCC
Confidence 3456788899999888874 2321 12223334434455555545789999995532211
Q ss_pred --CCceeEEEeEEEeCcchhcc---c----HHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 107 --GESWHGHVTAVTVSPEYRRQ---Q----LAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 107 --~~~~~~~i~~l~V~p~~rg~---G----ig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
......++..++|+|++++. + +...|+..+.+++.+ .|++.+...+.+
T Consensus 93 ~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~-~Gi~~~~~v~~~ 149 (207)
T PRK13834 93 LNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMA-NGYTEIVTATDL 149 (207)
T ss_pred CCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHH-CCCCEEEEEECH
Confidence 01224679999999986422 2 667899999999999 999998877655
No 93
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=96.51 E-value=0.065 Score=41.52 Aligned_cols=108 Identities=11% Similarity=-0.030 Sum_probs=71.8
Q ss_pred eEEEEcccccHHHHHHHHhhhcC----CCcchHHHHHHhccCC--CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEE
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYLARWP--DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAV 117 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~~~~--~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l 117 (166)
++++. .+|++...++...... ..++.+++.......+ ..++++...+|++||.+.+....+. .+....
T Consensus 152 v~v~~--~~~l~~F~~l~~~t~~r~g~p~~~~~~f~~l~~~~~~~~~l~~a~~~~g~~va~~l~~~~~~~----~~~~~~ 225 (330)
T TIGR03019 152 LTVTV--DGDLDRFYDVYAENMRDLGTPVFSRRYFRLLKDVFGEDCEVLTVRLGDGVVASAVLSFYFRDE----VLPYYA 225 (330)
T ss_pred eEEEE--CCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhcccCEEEEEEEeCCCCEEEEEEEEEeCCE----EEEEec
Confidence 44543 4567877777654332 2345666665554322 2345555248888888765554432 333355
Q ss_pred EeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 118 TVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 118 ~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
+.+++++..+-+..|+-.++++|.+ .|+....+.....+.
T Consensus 226 g~~~~~~~~~~~~lL~w~~i~~a~~-~G~~~fDfG~s~~~~ 265 (330)
T TIGR03019 226 GGLREARDVAANDLMYWELMRRACE-RGLRVFDFGRSKRGT 265 (330)
T ss_pred cChHHHHhhChHHHHHHHHHHHHHH-CCCcEEEcCCCCCCC
Confidence 6789999999999999999999999 999999987654443
No 94
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=96.48 E-value=0.014 Score=45.60 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=72.2
Q ss_pred ccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhc-ccHHH
Q 031082 52 NDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRR-QQLAK 130 (166)
Q Consensus 52 ~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg-~Gig~ 130 (166)
=|++.+..+.++.|.....+..|..++...-...+|+.| --|.+++.+++.......|+..++|.++.|| .||+.
T Consensus 345 Ldl~r~q~LI~~SFkRTLd~h~y~~r~~~~La~~iVsgd----Y~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd 420 (495)
T COG5630 345 LDLPRLQHLIQSSFKRTLDPHYYETRINTPLARAIVSGD----YRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISD 420 (495)
T ss_pred cCcHHHHHHHHHHHhhccCHHHHHHhccCcceeEEeecc----ceeeEEEEeeccCCCCCcceeeeeccccccccchHHH
Confidence 357778888899998888888888888775556666554 3455555566444445689999999999999 89999
Q ss_pred HHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 131 KLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 131 ~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
.++.-+.+..-+ .+....+..| ++-++|
T Consensus 421 ~vfniM~e~fP~-----eL~WRSR~~N-~vNkwY 448 (495)
T COG5630 421 AVFNIMREEFPN-----ELFWRSRHNN-QVNKWY 448 (495)
T ss_pred HHHHHHHHhCcH-----hhhhhhcccC-cchhee
Confidence 988877665543 3444444444 344444
No 95
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=96.48 E-value=0.019 Score=36.57 Aligned_cols=58 Identities=12% Similarity=-0.074 Sum_probs=41.1
Q ss_pred CeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 93 NRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 93 ~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
+..=|++++..... ....++..++|.+..||+|+|..|++.+.+.. +.+...+.++|+
T Consensus 18 e~y~~~aivt~~~~--~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~------~~L~Wrsr~~n~ 75 (99)
T cd04265 18 EGYNAAAIVTNEEV--DGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF------PKLFWRSRSTNP 75 (99)
T ss_pred CCCcEEEEEeccCC--CCceEEEEEEEchhhhhcChHHHHHHHHHhhC------CceEEEeCCCCc
Confidence 34444554443331 12489999999999999999999999887664 347778887775
No 96
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=96.41 E-value=0.024 Score=42.63 Aligned_cols=92 Identities=12% Similarity=0.178 Sum_probs=57.4
Q ss_pred eeEEEEcccccHHHHHHHHhhhcC----CCcchHHHHHHhc------------cCCCeEEEEEc-CCCeEEEEEEEEEec
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLT----ETFNMSFYMTYLA------------RWPDYFHVAEG-PGNRIMGYIMGKVEG 105 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~------------~~~~~~~v~~~-~~~~ivG~~~~~~~~ 105 (166)
|+.+||+...|++++.++....-. -+-+...+..++. ....+++|.+| +.|+++|++.+..--
T Consensus 1 mlvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~v 80 (336)
T COG3138 1 MLVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAV 80 (336)
T ss_pred CcccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEee
Confidence 467999999999999999865432 1122222222221 12346788886 479999998542110
Q ss_pred C-CCce--------------------------------eEEEeEEEeCcchhcccHHHHHHH
Q 031082 106 Q-GESW--------------------------------HGHVTAVTVSPEYRRQQLAKKLMN 134 (166)
Q Consensus 106 ~-~~~~--------------------------------~~~i~~l~V~p~~rg~Gig~~Ll~ 134 (166)
. ...| ...+..++++|++|.-|.|+.|-+
T Consensus 81 Gl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 81 GLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred ccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 0 0000 134677999999999999887654
No 97
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=96.21 E-value=0.024 Score=40.23 Aligned_cols=48 Identities=19% Similarity=0.453 Sum_probs=34.9
Q ss_pred eEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcC
Q 031082 94 RIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDK 145 (166)
Q Consensus 94 ~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g 145 (166)
.++||-.=.....+. -.+..|.|.|.||++|+|+.|++.--..++. .+
T Consensus 66 h~vGyFSKEk~s~~~---~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~-e~ 113 (188)
T PF01853_consen 66 HIVGYFSKEKESWDN---NNLSCILTLPPYQRKGYGRFLIDFSYELSRR-EG 113 (188)
T ss_dssp EEEEEEEEESS-TT----EEESEEEE-GGGTTSSHHHHHHHHHHHHHHH-TT
T ss_pred eeEEEEEEEecccCC---eeEeehhhcchhhhcchhhhhhhhHHHHhhc-cC
Confidence 377877432222222 4588999999999999999999999888887 44
No 98
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.15 E-value=0.027 Score=46.37 Aligned_cols=144 Identities=15% Similarity=0.037 Sum_probs=94.3
Q ss_pred cccccccccccceeeecC-CCce-eEEEEcccccHHHHHHHHhhhcCC-------CcchHH-----HHHHhccCCCeEEE
Q 031082 22 LAVPFNVSFRARSFFVPN-SRKM-TTIRRFCCNDLLRFTSVNLDHLTE-------TFNMSF-----YMTYLARWPDYFHV 87 (166)
Q Consensus 22 ~~~p~~~~~~~~~~~~~~-~~~~-~~ir~~~~~D~~~i~~l~~~~~~~-------~~~~~~-----~~~~~~~~~~~~~v 87 (166)
+.+|........-...|- +..| +.|||....|-+.+..+....+.+ +....+ +--.+...++.+++
T Consensus 656 Rllpvd~~ndlf~~~~p~~Pt~~~y~iRPy~~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~lC~v 735 (891)
T KOG3698|consen 656 RLLPVDDDNDLFLSNKPFLPTCMFYDIRPYTIADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHLCEV 735 (891)
T ss_pred hccccCCCcceeecCCCCCccceeEeeccCccccHHHHHhhhhheeccCceeccCCCCCccccccchhheeccChhheee
Confidence 345665555555444332 2223 679999999999999998666531 111222 22233334567899
Q ss_pred EEcCCCeEEEEEEEEEecCCCc--------------------e-----------------------e-------------
Q 031082 88 AEGPGNRIMGYIMGKVEGQGES--------------------W-----------------------H------------- 111 (166)
Q Consensus 88 ~~~~~~~ivG~~~~~~~~~~~~--------------------~-----------------------~------------- 111 (166)
+.+.+++|+||+....+-.--. + .
T Consensus 736 ~~de~~~i~gYa~a~~Dvt~F~rn~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~~~n 815 (891)
T KOG3698|consen 736 VDDEGHKIVGYASAHFDVTLFSRNFLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQIFEN 815 (891)
T ss_pred eecCCCceeEEeeeecccchhhhceeeeeHHHHHHHhhccccccCCchhHHHHHHHHHHccCccchhhccccCcHHHHhc
Confidence 9877888999996544321000 0 0
Q ss_pred -EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 112 -GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 112 -~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
..+....++.+.---|+.+++++-++..++. .|.....+.|..++.+-++||.+
T Consensus 816 fPa~v~~~~~~~a~D~~~~k~m~~vll~tL~a-NGsrGaf~~V~~dD~~~~~fys~ 870 (891)
T KOG3698|consen 816 FPAWVETYFGMDASDAHPMKKMIQVLLVTLAA-NGSRGAFLTVAIDDIERQKFYSE 870 (891)
T ss_pred ChHHHhhccccccccchHHHHHHHHHHHHHHh-cCCcceeEEechhHHHHHHHHHH
Confidence 0011123444555679999999999999999 99999999999999999999864
No 99
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.03 E-value=0.045 Score=44.31 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=84.7
Q ss_pred eeEEEEcccccHHHHHHHHhhhcC-----CCcchHHHHHHhccCCCeEEEEE--c--CCCeEEEEEEEEEecCCCceeEE
Q 031082 43 MTTIRRFCCNDLLRFTSVNLDHLT-----ETFNMSFYMTYLARWPDYFHVAE--G--PGNRIMGYIMGKVEGQGESWHGH 113 (166)
Q Consensus 43 ~~~ir~~~~~D~~~i~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~--~--~~~~ivG~~~~~~~~~~~~~~~~ 113 (166)
.++++++++.+++.+.+|.+..-. ..+.+....+....+....|-+. | .|+.+||++.+..... . -.
T Consensus 413 ~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~~--~--w~ 488 (574)
T COG3882 413 RLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKES--E--WF 488 (574)
T ss_pred EEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEecCC--e--EE
Confidence 367899999999999999865432 34555666664444333333222 1 4788999998766543 1 33
Q ss_pred EeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec--CChhhhhcccC
Q 031082 114 VTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA--SNTPAIKISDM 166 (166)
Q Consensus 114 i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~--~N~~a~~~Y~k 166 (166)
|..+.+.=.--||++-.+||..+++.|.. .|+..+.....+ .|.+...||+.
T Consensus 489 IDt~lmSCRVlgRkvE~~l~~~~~e~A~~-~gi~tir~~Y~pt~kN~pv~~FyE~ 542 (574)
T COG3882 489 IDTFLMSCRVLGRKVEQRLMNSLEEQALS-EGINTIRGYYIPTEKNAPVSDFYER 542 (574)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcceeeeEecccccCCcHHHHHHH
Confidence 55666666777999999999999999999 999999997544 57777888863
No 100
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=95.89 E-value=0.28 Score=32.85 Aligned_cols=81 Identities=12% Similarity=0.158 Sum_probs=56.8
Q ss_pred hHHHHHHhccCC-CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEE
Q 031082 71 MSFYMTYLARWP-DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFV 149 (166)
Q Consensus 71 ~~~~~~~~~~~~-~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i 149 (166)
...+...+.... ....+....+|++||++.+...++.. -.|. .+-+|++..+++|+-.+-.-++.|++ .|.+-+
T Consensus 25 ~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~~gl---SaVY-~fyDPd~~~~SlG~~~iL~eI~~a~~-~~l~y~ 99 (128)
T PF04377_consen 25 QEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILPDGL---SAVY-TFYDPDYSKRSLGTYSILREIELARE-LGLPYY 99 (128)
T ss_pred HHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeecccchh---hhee-eeeCCCccccCcHHHHHHHHHHHHHH-cCCCEE
Confidence 445555555433 33333333599999999877666532 1122 23489999999999999999999999 999999
Q ss_pred EEEeecC
Q 031082 150 DLFVRAS 156 (166)
Q Consensus 150 ~l~v~~~ 156 (166)
+|.-.-.
T Consensus 100 YLGY~I~ 106 (128)
T PF04377_consen 100 YLGYWIH 106 (128)
T ss_pred eeCeEeC
Confidence 9964433
No 101
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=95.86 E-value=0.22 Score=38.07 Aligned_cols=106 Identities=12% Similarity=0.060 Sum_probs=61.4
Q ss_pred eEEEEc---ccccHHHHHHHHhhhcCCC--cchHHHHHHhcc---CCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEe
Q 031082 44 TTIRRF---CCNDLLRFTSVNLDHLTET--FNMSFYMTYLAR---WPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVT 115 (166)
Q Consensus 44 ~~ir~~---~~~D~~~i~~l~~~~~~~~--~~~~~~~~~~~~---~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~ 115 (166)
..+.+. ++++.+++.++........ ....+....+.. .....+++.+.+|+++|++.+....... ++..
T Consensus 133 ~~~~~~~~~~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~~~~~---~~~~ 209 (299)
T PF09924_consen 133 FEVVPIPELDPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPLGGRD---GWSI 209 (299)
T ss_dssp -EEEE-----GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEEE-TT---EEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEccCCc---cEEE
Confidence 456665 7888888888876655443 222333333322 2345666773499999999887666323 4444
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEe
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFV 153 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v 153 (166)
++.-...---+|+-..|+..+++.+++ .|+..+.|..
T Consensus 210 ~~~k~~~~a~~G~~e~l~~~~~~~~~~-~g~~~lnLg~ 246 (299)
T PF09924_consen 210 DFEKADPDAPKGIYEFLNVEFAEHLKA-EGVEYLNLGF 246 (299)
T ss_dssp EEEEE-TT-STTHHHHHHHHHHHHS---TT--EEE---
T ss_pred EEEecCCCCCCcHHHHHHHHHHHhhhh-CCceEEEccc
Confidence 444432225789999999999999998 7999988643
No 102
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=95.71 E-value=0.04 Score=41.59 Aligned_cols=50 Identities=20% Similarity=0.442 Sum_probs=37.5
Q ss_pred CCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcC
Q 031082 92 GNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDK 145 (166)
Q Consensus 92 ~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g 145 (166)
+-.+|||-.=-....+. -.+..|.|.|.||++|+|+.|++.--+.++. .|
T Consensus 139 g~h~vGYFSKEK~s~~~---nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~-Eg 188 (290)
T PLN03238 139 GSHIVGYFSKEKVSAED---YNLACILTLPPYQRKGYGKFLISFAYELSKR-EG 188 (290)
T ss_pred CcEEEEEeceeccccCC---CcEEEEEecChhhhccHhHhHHHHHhHHhhc-cC
Confidence 34588887433322222 3478999999999999999999999988887 44
No 103
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.51 E-value=0.26 Score=35.56 Aligned_cols=108 Identities=12% Similarity=0.054 Sum_probs=71.3
Q ss_pred EEcccccHHHHHHHHhhhcCC--Ccc----hHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecC--------------
Q 031082 47 RRFCCNDLLRFTSVNLDHLTE--TFN----MSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQ-------------- 106 (166)
Q Consensus 47 r~~~~~D~~~i~~l~~~~~~~--~~~----~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~-------------- 106 (166)
+...++-++++..++...|.+ .|. ..+..+.+++....++++.+.+|+|+|++.+.....
T Consensus 10 ~~~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~ 89 (209)
T COG3916 10 RELFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEG 89 (209)
T ss_pred chhcHHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcC
Confidence 445566788888888888864 232 233445555555666677557999999996543321
Q ss_pred ---CCc-eeEEEeEEEeCc--chhcc---c-HHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 107 ---GES-WHGHVTAVTVSP--EYRRQ---Q-LAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 107 ---~~~-~~~~i~~l~V~p--~~rg~---G-ig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
... ..-+...++|++ .-+.. . ++..|+.-+++++.+ +|+++|...+..
T Consensus 90 ~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~-~G~~~IvtVt~~ 147 (209)
T COG3916 90 GPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALA-RGITGIVTVTDT 147 (209)
T ss_pred CCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHH-cCCceEEEEEch
Confidence 000 113467788886 33322 2 478899999999999 999999887654
No 104
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.50 E-value=0.14 Score=37.39 Aligned_cols=65 Identities=9% Similarity=-0.032 Sum_probs=41.7
Q ss_pred HHHhccCCCeEEEEEcC----CCeEEEEEE------EEEecC---CCceeEEEeEEEeCcchhcccHHHHHHHHHHHH
Q 031082 75 MTYLARWPDYFHVAEGP----GNRIMGYIM------GKVEGQ---GESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDI 139 (166)
Q Consensus 75 ~~~~~~~~~~~~v~~~~----~~~ivG~~~------~~~~~~---~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~ 139 (166)
...++.+...++...++ .+.|.|++- +..++. .......|.+++|++.-|+.|.|++|++++++.
T Consensus 59 dKl~~sd~~vvy~~kd~~a~~ks~l~GllKVG~KkLfl~D~~~~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~k 136 (264)
T KOG4601|consen 59 DKLVDSDEEVVYYIKDEKANGKSILKGLLKVGYKKLFLTDNEQNQYEEEALCILDFYVHESEQRSGNGFKLFDYMLKK 136 (264)
T ss_pred HHhhcCcceEEEEEeecccCcchheeeeehccceeEEEeccHhhhhccCCceEEEEEeehhhhhcCchHHHHHHHHHh
Confidence 33444455555544432 245788872 222222 112235699999999999999999999999875
No 105
>PTZ00064 histone acetyltransferase; Provisional
Probab=95.30 E-value=0.044 Score=44.41 Aligned_cols=49 Identities=22% Similarity=0.297 Sum_probs=36.7
Q ss_pred CeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcC
Q 031082 93 NRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDK 145 (166)
Q Consensus 93 ~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g 145 (166)
-.+|||-.=-....+. -.+..|.|.|.||++|+|+.|++.--..++. .|
T Consensus 369 ~HiVGYFSKEK~S~~~---nNLACILtLPpyQRKGYGklLIdfSYeLSrr-Eg 417 (552)
T PTZ00064 369 CHIVGYFSKEKVSLLH---YNLACILTLPCYQRKGYGKLLVDLSYKLSLK-EG 417 (552)
T ss_pred cEEEEEecccccCccc---CceEEEEecchhhhcchhhhhhhhhhhhhhh-cC
Confidence 4688887432222222 3488999999999999999999999888877 44
No 106
>PLN03239 histone acetyltransferase; Provisional
Probab=95.08 E-value=0.07 Score=41.43 Aligned_cols=49 Identities=14% Similarity=0.216 Sum_probs=36.3
Q ss_pred CeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcC
Q 031082 93 NRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDK 145 (166)
Q Consensus 93 ~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g 145 (166)
-.+|||-.=-....+. -.+..|.|.|.||++|+|+.|++.--+.++. .|
T Consensus 198 ~h~vGYFSKEK~s~~~---~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~-Eg 246 (351)
T PLN03239 198 FHPVGYYSKEKYSDVG---YNLACILTFPAHQRKGYGRFLIAFSYELSKK-EE 246 (351)
T ss_pred eEEEEEeeecccCCCC---CceEEEEecChhhhcchhhhhHhhhhHhhhh-cC
Confidence 4478877432222222 3488999999999999999999999888887 44
No 107
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=94.67 E-value=0.049 Score=43.78 Aligned_cols=49 Identities=16% Similarity=0.392 Sum_probs=36.7
Q ss_pred CeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcC
Q 031082 93 NRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDK 145 (166)
Q Consensus 93 ~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g 145 (166)
-.+|||-.=-....+. ..+..|.|.|.||++|+|+.|++.--+.++. .|
T Consensus 291 ~h~vGyFSKEk~s~~~---~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~-eg 339 (450)
T PLN00104 291 CHMVGYFSKEKHSEED---YNLACILTLPPYQRKGYGKFLIAFSYELSKR-EG 339 (450)
T ss_pred cEEEEEecccccCcCC---CceEEEEecchhhhcchhheehhheehhhhc-cC
Confidence 4688887432222222 3478999999999999999999998888877 44
No 108
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=94.65 E-value=1.1 Score=32.03 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=70.3
Q ss_pred eecCCCceeEEEEcccccHHHHHHHHhhhcC-----CCcchHHHHHHhccCCC--eEEEEEcCCCeEEEEEEEEEecC--
Q 031082 36 FVPNSRKMTTIRRFCCNDLLRFTSVNLDHLT-----ETFNMSFYMTYLARWPD--YFHVAEGPGNRIMGYIMGKVEGQ-- 106 (166)
Q Consensus 36 ~~~~~~~~~~ir~~~~~D~~~i~~l~~~~~~-----~~~~~~~~~~~~~~~~~--~~~v~~~~~~~ivG~~~~~~~~~-- 106 (166)
.+|+.+..-.+|++++.|++++.++...... ..++.+.+.-.+...+. ..+|.++.+|+|..++.+...+.
T Consensus 21 klp~~~~~~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstv 100 (190)
T PF02799_consen 21 KLPEETKTPGLRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTV 100 (190)
T ss_dssp ---SS-SSTTEEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEE
T ss_pred cCCCCCCCCccccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceee
Confidence 4555544445999999999999999876654 23344555555544333 46788866779999997654432
Q ss_pred ---CC---ceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 107 ---GE---SWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 107 ---~~---~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
.. -..++..- .+... ==-++||+.++-.|++ .|+.........+|.
T Consensus 101 i~~~k~~~l~aAY~fY-~~~~~----~~l~~Lm~DaLi~Ak~-~gfDVFNaLd~mdN~ 152 (190)
T PF02799_consen 101 IGNPKHKTLKAAYSFY-YVATS----TRLKELMNDALILAKN-EGFDVFNALDLMDNS 152 (190)
T ss_dssp SSSSSSSEEEEEEEEE-EEESS----SHHHHHHHHHHHHHHH-TTESEEEEESTTTGG
T ss_pred cCCCCccceeeeeeee-eeecC----CCHHHHHHHHHHHHHH-cCCCEEehhhhccch
Confidence 11 11233322 22221 2246799999999999 999988877666775
No 109
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=93.98 E-value=1.9 Score=32.09 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=57.5
Q ss_pred hHHHHHHhccCC-CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEE
Q 031082 71 MSFYMTYLARWP-DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFV 149 (166)
Q Consensus 71 ~~~~~~~~~~~~-~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i 149 (166)
...+...+.... ...++....+|++||++.....++.. -.| -.+-||++-.+++|+-.+-.-++.|++ .|.+.+
T Consensus 130 ~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~d~l---SAV-Y~FyDPd~~~~SLG~~~iL~qI~~ak~-~gl~y~ 204 (240)
T PRK01305 130 RDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLDDGL---SAV-YTFYDPDEEHRSLGTFAILWQIELAKR-LGLPYV 204 (240)
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccCCce---eeE-EEeeCCCccccCCHHHHHHHHHHHHHH-cCCCeE
Confidence 445555555433 22233222589999999887766531 112 234689999999999999999999999 999999
Q ss_pred EEEeecCC
Q 031082 150 DLFVRASN 157 (166)
Q Consensus 150 ~l~v~~~N 157 (166)
+|...-.+
T Consensus 205 YLGY~I~~ 212 (240)
T PRK01305 205 YLGYWIKG 212 (240)
T ss_pred eeeEEECC
Confidence 99755443
No 110
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=93.45 E-value=1.3 Score=34.66 Aligned_cols=102 Identities=11% Similarity=0.096 Sum_probs=61.9
Q ss_pred eEEEEcccccHHHHHHH---HhhhcCC--------CcchHHHHHHhccCC---C-eEEEEEcCCCeEEEEEEEEEec---
Q 031082 44 TTIRRFCCNDLLRFTSV---NLDHLTE--------TFNMSFYMTYLARWP---D-YFHVAEGPGNRIMGYIMGKVEG--- 105 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l---~~~~~~~--------~~~~~~~~~~~~~~~---~-~~~v~~~~~~~ivG~~~~~~~~--- 105 (166)
+.......+|..++.++ ..+.+.+ .|+.+|+.-.+..+. + ++-|-....+++|||+......
T Consensus 81 f~W~tldv~~~~~l~el~~lL~enyVEd~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~~s~kLVaFIsaiP~~irv 160 (421)
T KOG2779|consen 81 FRWETLDVSDFKDLEELYNLLNENYVEDDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVKSSKKLVAFISAIPATIRV 160 (421)
T ss_pred ceeeccCCccHhHHHHHHhhcccCCCCccccchhhhccHHHHHhhhcCCCCccceEEEEEEecCCceEEEEeccccEEEE
Confidence 34455555555444444 3333322 244555555554322 1 2333333467999999553221
Q ss_pred -CCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCc
Q 031082 106 -QGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKA 146 (166)
Q Consensus 106 -~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~ 146 (166)
+.......|..++||++.|++.++--|++++-+++.- .|+
T Consensus 161 rdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl-~gI 201 (421)
T KOG2779|consen 161 RDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNL-EGI 201 (421)
T ss_pred ccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhh-hhh
Confidence 2233357899999999999999999999999888765 443
No 111
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=93.41 E-value=0.14 Score=40.44 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=26.8
Q ss_pred EEeEEEeCcchhcccHHHHHHHHHHHHHHh
Q 031082 113 HVTAVTVSPEYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 113 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
.+..|.|.|.||++|+|+.|+++--+..+.
T Consensus 262 NlaCILtLPpyQRkGYGklLIdFSYeLSr~ 291 (396)
T KOG2747|consen 262 NLACILTLPPYQRKGYGKLLIDFSYELSRR 291 (396)
T ss_pred ceeeeeecChhhhcccchhhhhhhhhhhcc
Confidence 478899999999999999999988877766
No 112
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=93.00 E-value=0.08 Score=42.46 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=32.9
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEE
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFV 149 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i 149 (166)
+.|..+.|||+||+-|+|..-+..+.+|..+ +..+.+
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~e-RriPEm 278 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIE-RRIPEM 278 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHH-hhChhh
Confidence 6799999999999999999999999999998 655543
No 113
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=92.97 E-value=0.24 Score=38.74 Aligned_cols=42 Identities=12% Similarity=0.238 Sum_probs=32.4
Q ss_pred eEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEee
Q 031082 111 HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVR 154 (166)
Q Consensus 111 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~ 154 (166)
...|..+.+.|.||++|+|..|++.+.....++-. .+.++|.
T Consensus 217 R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~--v~DiTVE 258 (403)
T KOG2696|consen 217 RPRISQMLILPPFQGKGLGSQLYEAIARDYLEEPT--VLDITVE 258 (403)
T ss_pred hhhhheeEEeccccCCchHHHHHHHHHHhhccCCc--eeEEEec
Confidence 36789999999999999999999999966655133 3444443
No 114
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=92.28 E-value=0.16 Score=41.02 Aligned_cols=43 Identities=12% Similarity=0.141 Sum_probs=34.0
Q ss_pred CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcccC
Q 031082 120 SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISDM 166 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~k 166 (166)
...||.+|+|++||+.+++.|++ .+..+|.+...- .+...|.|
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~e-e~~~ki~viSgi---G~ReYy~k 501 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIARE-EGAKKILVISGI---GVREYYRK 501 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHh-hccccEEEEecc---cHHHHHHH
Confidence 46899999999999999999999 778887765432 46666654
No 115
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=92.21 E-value=0.16 Score=43.18 Aligned_cols=31 Identities=23% Similarity=0.504 Sum_probs=28.4
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHh
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
+.|..|+|+|+|++.|||++.++-+.++..-
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG 645 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEG 645 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhc
Confidence 6799999999999999999999999888754
No 116
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=91.86 E-value=0.49 Score=30.04 Aligned_cols=23 Identities=30% Similarity=0.554 Sum_probs=20.0
Q ss_pred eEEEeEEEeCcchhcccHHHHHH
Q 031082 111 HGHVTAVTVSPEYRRQQLAKKLM 133 (166)
Q Consensus 111 ~~~i~~l~V~p~~rg~Gig~~Ll 133 (166)
.+.+..++|+|+||++.....|.
T Consensus 78 ~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 78 VAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred EEEeehheECHhHCCChHHHHHh
Confidence 47899999999999998887765
No 117
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=90.30 E-value=4.8 Score=31.98 Aligned_cols=106 Identities=8% Similarity=-0.013 Sum_probs=63.2
Q ss_pred cccccHHHHHHHHhhhcCCCc-----chHHHHHHhccCC-Ce-EEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCc
Q 031082 49 FCCNDLLRFTSVNLDHLTETF-----NMSFYMTYLARWP-DY-FHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSP 121 (166)
Q Consensus 49 ~~~~D~~~i~~l~~~~~~~~~-----~~~~~~~~~~~~~-~~-~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p 121 (166)
+++++++.+..+....+...| +..|+....+.-+ .. ++++. .+|++||++.....++. .+=.......
T Consensus 210 i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~-~~g~~Va~aL~l~~~~~----LyGRYwG~~~ 284 (370)
T PF04339_consen 210 ITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVAR-RDGQPVAFALCLRGDDT----LYGRYWGCDE 284 (370)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEE-ECCeEEEEEEEEEeCCE----EEEeeecccc
Confidence 456677888888766665433 3455665555533 33 45556 59999999977666542 2212223345
Q ss_pred chhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhh
Q 031082 122 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAI 161 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~ 161 (166)
++.+.-.- ...-..+++|.+ +|++.+.....-+.+.++
T Consensus 285 ~~~~LHFe-~cYYq~Ie~aI~-~Gl~~f~~GaqGEHK~~R 322 (370)
T PF04339_consen 285 EIPFLHFE-LCYYQGIEYAIE-HGLRRFEPGAQGEHKIAR 322 (370)
T ss_pred cccCcchH-HHHHHHHHHHHH-cCCCEEECCcchhHHHHc
Confidence 55443322 223457899999 999998776655544443
No 118
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=90.23 E-value=0.34 Score=37.81 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=29.3
Q ss_pred cchhcccHHHHHHHHHHHHHHhhcCcEEEEEEe
Q 031082 121 PEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFV 153 (166)
Q Consensus 121 p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v 153 (166)
..||.||+|+.||+.++..|++++|-.+|.+..
T Consensus 497 ~KfQHQG~GtLLmeEAERIAr~EHgS~KiavIS 529 (554)
T KOG2535|consen 497 TKFQHQGFGTLLMEEAERIAREEHGSGKIAVIS 529 (554)
T ss_pred hhhhhcchhhHHHHHHHHHHHHhcCCCceEEEe
Confidence 379999999999999999999988888877654
No 119
>PRK14852 hypothetical protein; Provisional
Probab=88.52 E-value=2.4 Score=37.77 Aligned_cols=117 Identities=10% Similarity=0.036 Sum_probs=77.2
Q ss_pred eEEEEcc-cccHHHHHHHHhhhcC-CCcc----hHHHHHHhccCC-CeEEEEEcCCCeEEEEEEEEEecC----------
Q 031082 44 TTIRRFC-CNDLLRFTSVNLDHLT-ETFN----MSFYMTYLARWP-DYFHVAEGPGNRIMGYIMGKVEGQ---------- 106 (166)
Q Consensus 44 ~~ir~~~-~~D~~~i~~l~~~~~~-~~~~----~~~~~~~~~~~~-~~~~v~~~~~~~ivG~~~~~~~~~---------- 106 (166)
..||.+. .+|+.++..|....+. ..|. ...+...+...+ ..+|++.. .++++|...+..+..
T Consensus 29 ~~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~-~~~~l~T~t~~~ds~~~Gl~~D~lf 107 (989)
T PRK14852 29 PAIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKS-YHDVLCTLTHIPDSGLFGLPMDTLY 107 (989)
T ss_pred cceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEecc-CCcEEEEEEEecCCcccCcCHHHHH
Confidence 4577755 6789999999866553 2222 122222223333 44577764 577777775544432
Q ss_pred ---------CCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 107 ---------GESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 107 ---------~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
.....+.+..++++++.|..-+=-.+++.+.+++.. .++..+.+.|++.. ..||+
T Consensus 108 ~~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~-~~~dd~~i~VnPkH---~~FY~ 171 (989)
T PRK14852 108 KPEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMM-SEVDDILVTVNPKH---VKFYT 171 (989)
T ss_pred HHHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHH-cCCCeEEEEECcch---HHHHH
Confidence 112347899999998888777667888888888888 89999999997765 56665
No 120
>PHA00432 internal virion protein A
Probab=87.85 E-value=6.4 Score=26.64 Aligned_cols=102 Identities=15% Similarity=0.075 Sum_probs=53.0
Q ss_pred EEEEcccccHHHHHHHHhhhcCCCcchHHHHH----HhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeC
Q 031082 45 TIRRFCCNDLLRFTSVNLDHLTETFNMSFYMT----YLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVS 120 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~ 120 (166)
.|++++..|++.+ ++......+ +.. .....+..++.+. .+|.+++.+. ... ..+..+..+
T Consensus 2 ~I~paT~~di~~~-~lr~~D~~E------~~a~g~~~~~~~s~~~~~~~-~~G~~~aI~G---n~G-----~~vW~v~T~ 65 (137)
T PHA00432 2 YIRQTTERDFDVF-NPSFEDILE------AKAYGIEPSFPPDSECVTLS-LDGFVLAIGG---NQG-----DQVWFVTSD 65 (137)
T ss_pred ccccccHHHHHHc-CCCHHHHHH------HHhcCCCCCCCCCceEEEEe-cCCeEEEEec---CCC-----CceEEEecH
Confidence 5888888888777 433222110 000 0011233466666 5899988883 111 222333332
Q ss_pred cchh-----cccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 121 PEYR-----RQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 121 p~~r-----g~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
.=.+ .+.. ++++....+.+.+ .++.++=.|...|..+++|-+
T Consensus 66 ~v~~~~~~~~reF-~k~~~~~ld~ml~--~yp~LwNyV~~~N~~hir~Lk 112 (137)
T PHA00432 66 QVWRLTKKEKREF-RKLIMEYRDMMLD--QYPSLWNYVWVGNKSHIRFLK 112 (137)
T ss_pred HhhhCChhhhHHH-HHHHHHHHHHHHH--hhhhhheeeecCCHHHHHHHH
Confidence 2222 2222 2233333333333 477788899999999998854
No 121
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=87.82 E-value=0.27 Score=38.15 Aligned_cols=44 Identities=20% Similarity=0.418 Sum_probs=30.5
Q ss_pred EEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHH
Q 031082 95 IMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISD 141 (166)
Q Consensus 95 ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~ 141 (166)
+|||..=.....+. -.+..|-+.|.||++|+|+.|+++--...+
T Consensus 249 ~vGyFSKEK~S~~~---yNLaCILtLP~yQRrGYG~lLIdFSY~Ls~ 292 (395)
T COG5027 249 LVGYFSKEKESEQD---YNLACILTLPPYQRRGYGKLLIDFSYLLSQ 292 (395)
T ss_pred eeeeechhhccccc---CceEEEEecChhHhcccceEeeeeeeeccc
Confidence 77876432222222 347889999999999999999886544444
No 122
>PRK04531 acetylglutamate kinase; Provisional
Probab=87.61 E-value=4.6 Score=32.43 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=60.7
Q ss_pred ccccHHHHHHHHhhhcCCCcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHH
Q 031082 50 CCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLA 129 (166)
Q Consensus 50 ~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig 129 (166)
.+=|.+.+.++....|.......++. . ...+.+.. ++..=|.+.+..... .+++..++|.+.-||.|++
T Consensus 260 ~~~d~~~l~~ll~~sf~r~~~~~y~~----~-~~~~~~y~--~~~y~~~Aiv~~~~~----~~~Ldkf~v~~~~~~~~v~ 328 (398)
T PRK04531 260 DELDLERLNLLIESSFGRTLKPDYFD----T-TQLLRAYV--SENYRAAAILTETGG----GPYLDKFAVLDDARGEGLG 328 (398)
T ss_pred hhcCHHHHHHHHhhhcccchHHHHhc----c-CCceEEEE--eCCCcEEEEEecCCC----ceEeEEEEEccchhhcChH
Confidence 33477788888877766544433333 2 22222222 344444444433322 4889999999999999999
Q ss_pred HHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 130 KKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 130 ~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
..+.+.+.+.. +.+...+.++|+ -.++|
T Consensus 329 d~vf~~~~~~~------~~L~Wrsr~~n~-~~~Wy 356 (398)
T PRK04531 329 RAVWNVMREET------PQLFWRSRHNNT-INKFY 356 (398)
T ss_pred HHHHHHHHhhC------CceEEEcCCCCC-cccee
Confidence 99998877654 347778887775 33444
No 123
>PHA01733 hypothetical protein
Probab=85.96 E-value=1.5 Score=30.19 Aligned_cols=115 Identities=11% Similarity=-0.046 Sum_probs=62.4
Q ss_pred EEEEcccccHHHHHH-HHhhhcCC----CcchHHHHHHhccCCCeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEe
Q 031082 45 TIRRFCCNDLLRFTS-VNLDHLTE----TFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTV 119 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~-l~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V 119 (166)
.||++|.+|+..+.+ +.+....+ .-...++...+.......+... .+|.++|.+.....-.+. .+.+..+..
T Consensus 4 ~IrpaT~~d~~~l~~n~r~~Dr~E~ealg~~p~~l~~~~~~s~~~v~~~~-~nG~l~aI~Gv~~d~~~~--vG~pWlV~T 80 (153)
T PHA01733 4 NNRPATQADATEVAQNLRQEDREEIEGLGHSPLALHLSLDVSENVVAFVA-PDGSLAGVAGLVEDMGNR--VGEIWMVCT 80 (153)
T ss_pred ccccccHHHHHHHHccCCHHHHHHHHHhCCCcccchhhhhccccceEEEe-cCCcEEEEecccccccCC--CCceeEEec
Confidence 478888888866665 43222110 0011133333444444545454 489999998765421111 244555554
Q ss_pred CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 120 SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
+.=.+ +-+.+++.+..+..++..++.++=.|...|..+++|-+
T Consensus 81 ~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk 123 (153)
T PHA01733 81 PAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLR 123 (153)
T ss_pred HHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHH
Confidence 43222 22334444444443335777888889999999998754
No 124
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=84.87 E-value=5.9 Score=25.66 Aligned_cols=43 Identities=19% Similarity=0.067 Sum_probs=34.3
Q ss_pred eeEEEeEEEeCcchhc-ccHHHHHHHHHHHHHHhhcCcEE-EEEEeecCCh
Q 031082 110 WHGHVTAVTVSPEYRR-QQLAKKLMNLLEDISDKIDKAYF-VDLFVRASNT 158 (166)
Q Consensus 110 ~~~~i~~l~V~p~~rg-~Gig~~Ll~~~~~~a~~~~g~~~-i~l~v~~~N~ 158 (166)
..+++..++|.+.-|| .|++..+.+.+.+. .++ +...+.++|+
T Consensus 38 ~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~------fp~~L~Wrsr~~n~ 82 (108)
T cd04266 38 KIAYLDKFAVLPKAQGSDGIADILFNAMLDG------FPNELIWRSRKDNP 82 (108)
T ss_pred CceEEEEEEEccccccccchHHHHHHHHHHc------CCCceEEEeCCCCc
Confidence 3589999999999997 89999999988763 233 6777787775
No 125
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=84.87 E-value=14 Score=33.85 Aligned_cols=65 Identities=11% Similarity=0.070 Sum_probs=49.0
Q ss_pred EEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEe-CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 85 FHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTV-SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 85 ~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V-~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
++.+.+.+|+++|++.+..... . ++-.+++- +|+ --.|+-..|+-.++.++++ .|+..+.|...+
T Consensus 422 i~~a~d~~G~i~af~s~~p~~~-~---g~slDLMRr~pd-apnGvmE~L~~~l~~~~k~-~G~~~~sLg~AP 487 (1094)
T PRK02983 422 LVEAHDADGQVVALLSFVPWGR-R---GLSLDLMRRSPD-APNGVIELMVAELALEAES-LGITRISLNFAV 487 (1094)
T ss_pred EEEEECCCCeEEEEEEEeeeCC-C---CEEEEecccCCC-CCCCHHHHHHHHHHHHHHH-cCCCEEEechhh
Confidence 4456666899999998877543 2 23344444 455 4799999999999999999 999999997655
No 126
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=84.85 E-value=7.5 Score=29.00 Aligned_cols=61 Identities=11% Similarity=0.058 Sum_probs=48.7
Q ss_pred CCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCC
Q 031082 92 GNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASN 157 (166)
Q Consensus 92 ~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N 157 (166)
.|++|+++......+.- .-.-.+-+|++..+++|+-.+-.=+.+|++ .|.+.++|...-.+
T Consensus 159 ~G~LvAVavtDvL~dGl----SsVY~FydPd~s~~SLGt~~iL~~I~~aq~-~~l~yvYLGYwI~~ 219 (253)
T COG2935 159 EGKLVAVAVTDVLPDGL----SSVYTFYDPDMSKRSLGTLSILDQIAIAQR-LGLPYVYLGYWIKG 219 (253)
T ss_pred CCcEEEEEeeecccCcc----eeEEEEeCCChhhhcchHHHHHHHHHHHHH-hCCCeEEEEEEECC
Confidence 79999999877776531 112235689999999999999999999999 99999999755443
No 127
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=83.72 E-value=21 Score=28.67 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=62.9
Q ss_pred hcCCCcchHHHHHHhccCC----CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHH
Q 031082 64 HLTETFNMSFYMTYLARWP----DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDI 139 (166)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~ 139 (166)
.|...|...++.+.+.... -..+... .+|.+|+.......... .+-.-.+++|++-+--=|..|+..++++
T Consensus 249 lf~~~~t~~fl~dL~~~~~~d~~~rl~gL~-~G~~lvAV~~~lr~~~t----~h~~l~a~dpe~~~~SPG~~lf~d~i~~ 323 (406)
T COG5653 249 LFRAGWTRDFLRDLFTQRAEDGSGRLFGLH-AGGRLVAVHGLLRQGGT----YHAWLGAIDPEFARASPGMLLFLDLIEW 323 (406)
T ss_pred ccccchHHHHHHHHHhccCcCCceEEEEEe-eCCEEEEEEeeeccCCE----EEEEeeccCHHHhhcCchHHHHHHHHHH
Confidence 3446677777777665422 2245555 58899998876655542 3444567999999999999999999999
Q ss_pred HHhhcCcEEEEEEeec
Q 031082 140 SDKIDKAYFVDLFVRA 155 (166)
Q Consensus 140 a~~~~g~~~i~l~v~~ 155 (166)
+.. .|+..+.+.|..
T Consensus 324 ~~~-~g~~~~DfgvG~ 338 (406)
T COG5653 324 ACG-QGLARFDFGVGD 338 (406)
T ss_pred Hhc-CCCeEEeecCCC
Confidence 999 999998887753
No 128
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=83.61 E-value=8.2 Score=28.80 Aligned_cols=32 Identities=19% Similarity=0.077 Sum_probs=27.1
Q ss_pred eeEEEeEEEeCcchhcccHHHHHHHHHHHHHH
Q 031082 110 WHGHVTAVTVSPEYRRQQLAKKLMNLLEDISD 141 (166)
Q Consensus 110 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~ 141 (166)
+.+-|..+.|.+-.|++||++.|++.+.....
T Consensus 182 ~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 182 AICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred cEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 34679999999999999999999998865543
No 129
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=83.04 E-value=6.9 Score=30.82 Aligned_cols=116 Identities=13% Similarity=0.087 Sum_probs=69.7
Q ss_pred ecCCCceeEEEEcccccHHHHHHHHhhhcC-----CCcchHHHHHHhccCCC--eEEEEEcCCCeEEEEEEEEEecC---
Q 031082 37 VPNSRKMTTIRRFCCNDLLRFTSVNLDHLT-----ETFNMSFYMTYLARWPD--YFHVAEGPGNRIMGYIMGKVEGQ--- 106 (166)
Q Consensus 37 ~~~~~~~~~ir~~~~~D~~~i~~l~~~~~~-----~~~~~~~~~~~~~~~~~--~~~v~~~~~~~ivG~~~~~~~~~--- 106 (166)
+|+.+..-.+|++.+.|++++.+|...... ..+..+.+.-.+..... ..||++..+|+|-+|+.+...+.
T Consensus 254 LP~~~~T~G~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~ 333 (421)
T KOG2779|consen 254 LPETTKTPGLREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVM 333 (421)
T ss_pred CCCCCCCCCcccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEecccccc
Confidence 344444445999999999999999755432 33344444444433233 46788867899999997755443
Q ss_pred --CCcee---EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 107 --GESWH---GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 107 --~~~~~---~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
..... ++.. ..|..+ -=-.+|+..++-.|++ .|+.........+|.
T Consensus 334 ~~~~~ktl~aaYly-Y~v~~~----t~~~~lvnDalilak~-~gfDVFNAld~meN~ 384 (421)
T KOG2779|consen 334 GNPKYKTLQAAYLY-YNVATS----TPLLQLVNDALILAKQ-KGFDVFNALDLMENE 384 (421)
T ss_pred CCCCcceeeeeeEE-EeccCC----ccHHHHHHHHHHHHHh-cCCceeehhhhhhhh
Confidence 11111 1211 222222 1246788888888988 888876665444554
No 130
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=80.79 E-value=25 Score=27.45 Aligned_cols=97 Identities=15% Similarity=0.154 Sum_probs=62.7
Q ss_pred EEEEcccccHHHHHHHHhhhcCCC--------cchHHHHHHhccCC---CeEEEEEc-CCCeEEEEEEEE-----EecCC
Q 031082 45 TIRRFCCNDLLRFTSVNLDHLTET--------FNMSFYMTYLARWP---DYFHVAEG-PGNRIMGYIMGK-----VEGQG 107 (166)
Q Consensus 45 ~ir~~~~~D~~~i~~l~~~~~~~~--------~~~~~~~~~~~~~~---~~~~v~~~-~~~~ivG~~~~~-----~~~~~ 107 (166)
.|...+..+++.+..+..+.+.+. |..+|+.-.+..+. .....+.. ...++|||+... ..+.
T Consensus 83 ~idv~N~~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~vRgK- 161 (451)
T COG5092 83 VIDVANKKQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVSVRGK- 161 (451)
T ss_pred eEeccccchhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhcCCCCceeeEEEEEEcccceeEEEEecceeEEEEccc-
Confidence 466677888888888876655432 22333433333322 12333331 245899999542 2222
Q ss_pred CceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHh
Q 031082 108 ESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 108 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
......+..++|+.+.|++-+.--|++.+-+++-.
T Consensus 162 ~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~ 196 (451)
T COG5092 162 RSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANV 196 (451)
T ss_pred ccccceEEEEEEehhhhhCccchHHHHHHHHhhhh
Confidence 22257899999999999999999999999888866
No 131
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=79.37 E-value=13 Score=23.56 Aligned_cols=47 Identities=15% Similarity=0.100 Sum_probs=36.4
Q ss_pred eEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 111 HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 111 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
.+++..++|.+.-++.|++..+.+.+.+.. +.+...+.++|+ ..++|
T Consensus 33 v~~LdkFav~~~~~~~gv~D~vf~~i~~d~------~~L~Wrsr~~n~-~n~Wy 79 (98)
T cd03173 33 IPYLDKFAVSDHLWLNNVTDNIFNLIRKDF------PSLLWRVRENDA-NLKWY 79 (98)
T ss_pred CEEEEEEEEcccccccCHHHHHHHHHHhhC------CeeEEEeCCCCC-ccceE
Confidence 378999999999999999999988776553 357778887775 33443
No 132
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=78.59 E-value=3.3 Score=29.17 Aligned_cols=104 Identities=11% Similarity=0.087 Sum_probs=61.1
Q ss_pred cccccHHHHHHHHhhhcCCC--cchHHHH---HHhccCCCeEEEEEcCCCeEEEEE----EEEEecCCCceeEEEeEEEe
Q 031082 49 FCCNDLLRFTSVNLDHLTET--FNMSFYM---TYLARWPDYFHVAEGPGNRIMGYI----MGKVEGQGESWHGHVTAVTV 119 (166)
Q Consensus 49 ~~~~D~~~i~~l~~~~~~~~--~~~~~~~---~~~~~~~~~~~v~~~~~~~ivG~~----~~~~~~~~~~~~~~i~~l~V 119 (166)
...+|-.++.++....+... ++-+-|. ...-..++.-.++.| ...+++-+ .+..-.+.....+.+.-.+|
T Consensus 15 L~l~dH~eLa~ffrktYgptg~fnakpFeg~RSWAGARPElRaIgyD-~~GvaAH~G~LRRFIkVG~vDlLVaElGLygV 93 (196)
T PF02474_consen 15 LQLADHVELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIGYD-SRGVAAHMGLLRRFIKVGEVDLLVAELGLYGV 93 (196)
T ss_pred cchhhhHHHHHHHHHhcCCCCcccCccCCcccccccCCceeEEEeec-CchHHHHHHHHHHHhccCCcceeEEEEEEEEe
Confidence 34556666677766666532 2111111 011112344455664 33333332 11222223334578899999
Q ss_pred CcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 120 SPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
.|+.+|.||+..+ ..+.-.+++ +|+.....+|..
T Consensus 94 RpDLEGlGi~hs~-r~m~PvLq~-LgVPF~FGtVR~ 127 (196)
T PF02474_consen 94 RPDLEGLGISHSM-RVMYPVLQE-LGVPFGFGTVRH 127 (196)
T ss_pred eccccccccchhh-hhhhhHHHh-cCCCeecccchH
Confidence 9999999999976 688888888 999888877764
No 133
>PF10530 Toxin_35: Toxin with inhibitor cystine knot ICK or Knottin scaffold; InterPro: IPR019553 Spider toxins of the CSTX family are ion channel toxins containing an inhibitor cystine knot (ICK) structural motif or Knottin scaffold. The four disulphide bonds present in the CSTX spider toxin family are arranged in the following pattern: 1-4, 2-5, 3-8 and 6-7. CSTX-1 is the most important component of Cupiennius salei (Wandering spider) venom in terms of relative abundance and toxicity and therefore is likely to contribute significantly to the overall toxicity of the whole venom. CSTX-1 blocked rat neuronal L-type, but no other types of HVA Cav channels []. Interestingly, the omega-toxins from Phoneutria nigriventer (Brazilian armed spider) venom (another South American species also belonging to the Ctenidae family) are included as they carry the same disulphide bond arrangement. suggested that CSTX-1 may interact with Cav channels. Calcium ion voltage channel heteromultimer containing an L-type pore-forming alpha1-subunit is the most probable candidate for the molecular target of CSTX-1 these toxins [].
Probab=68.89 E-value=2.3 Score=19.28 Aligned_cols=10 Identities=30% Similarity=0.866 Sum_probs=7.5
Q ss_pred CCCCCcccCC
Q 031082 1 MGHHRSCKNG 10 (166)
Q Consensus 1 ~~~~~~~~~~ 10 (166)
+|||+||...
T Consensus 2 I~~~~sC~~d 11 (23)
T PF10530_consen 2 IGKRHSCTHD 11 (23)
T ss_pred CccccccccC
Confidence 4899999753
No 134
>PRK00756 acyltransferase NodA; Provisional
Probab=67.97 E-value=9.1 Score=26.86 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=36.5
Q ss_pred CceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 108 ESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 108 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
....+.+.-.+|.||..|.||+..+ ..+.-.+++ +++....-+|..
T Consensus 82 DlLVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~-LgVPF~FGtVR~ 127 (196)
T PRK00756 82 DLLVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQE-LGVPFAFGTVRH 127 (196)
T ss_pred ceeEEEeeeeeeccccccccchhhH-HHHHHHHHh-cCCCeecccchH
Confidence 3445788999999999999998876 688888888 888877665543
No 135
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=67.79 E-value=40 Score=28.33 Aligned_cols=63 Identities=11% Similarity=0.025 Sum_probs=43.9
Q ss_pred EcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 89 EGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 89 ~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
.+.+|+|+|++.+........ .-+.-+=-+|+ --+|+=..|+..++.++|+ .|++.+.+...+
T Consensus 398 ~~~~g~VvaFa~l~~~~~~~~--~SlDlMR~sp~-ap~g~mdfLf~~li~~aKe-~G~~~fsLgmAp 460 (538)
T COG2898 398 VDNEGEVVAFANLMPTGGKEG--YSLDLMRRSPD-APNGTMDFLFSELILWAKE-EGYQRFSLGMAP 460 (538)
T ss_pred EcCCCCeEEEEeecccCCcce--eEEEeeecCCC-CCchHHHHHHHHHHHHHHH-cCCeEEecCCcc
Confidence 346888999997766544321 22333323333 3568999999999999999 999999986543
No 136
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=67.67 E-value=7.9 Score=29.23 Aligned_cols=55 Identities=9% Similarity=-0.139 Sum_probs=36.5
Q ss_pred CCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHH----HHHHHHHHhhcCc
Q 031082 91 PGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLM----NLLEDISDKIDKA 146 (166)
Q Consensus 91 ~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll----~~~~~~a~~~~g~ 146 (166)
.+|+|+|+=.+........-.....+.++||+++.--.|+-|| +.+.+.+++ .|.
T Consensus 180 l~~~P~Aiqlv~k~es~~wv~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~-~~k 238 (264)
T PF07395_consen 180 LNGQPCAIQLVYKVESPKWVYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRA-QGK 238 (264)
T ss_pred ECCcceEEEEEEEecCCCeEEEecccCccCcccccCCCccEEEEeeHHHHHHHHHH-hCC
Confidence 3899999986544333221123345578999999999999886 556666666 443
No 137
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=61.88 E-value=6.7 Score=30.05 Aligned_cols=96 Identities=8% Similarity=0.026 Sum_probs=52.9
Q ss_pred EEEcccccHHHHH-HHHhhhcCCCc---chHHHHHHhccCCCeE--EEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEe
Q 031082 46 IRRFCCNDLLRFT-SVNLDHLTETF---NMSFYMTYLARWPDYF--HVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTV 119 (166)
Q Consensus 46 ir~~~~~D~~~i~-~l~~~~~~~~~---~~~~~~~~~~~~~~~~--~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V 119 (166)
+-.++++|+..+. +|.+.-+...- ..+.+.+.+..-.+.+ .|+. .+|+|+|+=.+..-.....-.....+.++
T Consensus 160 is~fS~~Ela~iY~~Lf~~Rwg~~~~~~~~~~l~e~f~~Lr~l~fG~VLf-l~~~PcA~qlv~k~eSp~wi~~D~iNgG~ 238 (298)
T PRK15312 160 VADCSSDELTHIFIELFRSRFGNTLSCYPADNLANFFSQLRHLLFGHILY-IEGIPCAFDIVLKSESQMNVYFDVPNGAV 238 (298)
T ss_pred hHHCCHHHHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHhHHhheeeEEE-ECCcceEEEEEEEecCCCcEEEecccCcc
Confidence 3445555554444 44444444222 3444444444433332 2344 38999999865443332211233556789
Q ss_pred CcchhcccHHHHHH----HHHHHHHHh
Q 031082 120 SPEYRRQQLAKKLM----NLLEDISDK 142 (166)
Q Consensus 120 ~p~~rg~Gig~~Ll----~~~~~~a~~ 142 (166)
||++..--.|+-|+ +.+-+.+++
T Consensus 239 Dpe~~~~spGSIL~WlNi~~A~~~~~~ 265 (298)
T PRK15312 239 KNECMPLSPGSILMWLNISRARHYCQE 265 (298)
T ss_pred CcccccCCCccEEEEecHHHHHHHHHh
Confidence 99999999999886 455555555
No 138
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=58.16 E-value=55 Score=22.10 Aligned_cols=65 Identities=17% Similarity=0.085 Sum_probs=39.2
Q ss_pred CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEe
Q 031082 83 DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFV 153 (166)
Q Consensus 83 ~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v 153 (166)
+..++-..+.++++|+..+....... ...+. .-+|++|| ++...-....+|.-+...+..+...+
T Consensus 37 ~~~Y~gVyeg~~l~Gi~~v~~i~~~~---vecHa-~y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~v 101 (151)
T PF11039_consen 37 DQLYLGVYEGGQLGGIVYVEEIQPSV---VECHA-MYDPGFRG--YALEIGRLFCKWLLENSPFQNVITFV 101 (151)
T ss_pred ccEEEEEEeceEEEEEEEEEEEeeee---EEEEe-eeccccch--hHHHHHHHHHHHHhcCCceeEEEEec
Confidence 33444333578888988665444321 22333 44799999 88888777788876634554444333
No 139
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=56.58 E-value=92 Score=24.15 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=44.1
Q ss_pred EEEEEcCCCeEEEEEEEEEecC---CCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHh
Q 031082 85 FHVAEGPGNRIMGYIMGKVEGQ---GESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 85 ~~v~~~~~~~ivG~~~~~~~~~---~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
..++. ..+.||+.+.+..+.+ .......|..+.|..=|..-|+=..|+++++-++++
T Consensus 171 T~IIv-YRetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~ 230 (304)
T PF11124_consen 171 THIIV-YRETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQ 230 (304)
T ss_pred ceEEE-EcCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHH
Confidence 33333 3789999997765544 334557899999999999999999999999777765
No 140
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3.5.4.13 from EC).; GO: 0008829 dCTP deaminase activity; PDB: 2R9Q_C.
Probab=56.28 E-value=7.5 Score=30.43 Aligned_cols=39 Identities=15% Similarity=0.248 Sum_probs=15.4
Q ss_pred EEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccH
Q 031082 85 FHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQL 128 (166)
Q Consensus 85 ~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gi 128 (166)
-|+++ +|++||-.....+.... ..+..-.+...||+||+
T Consensus 318 PF~le--hGQ~vgrLvyE~m~~~P---~~lYG~~~gSnYq~QgL 356 (364)
T PF06559_consen 318 PFILE--HGQIVGRLVYERMAERP---ERLYGAGIGSNYQGQGL 356 (364)
T ss_dssp -EEEE--TT-EEEEEEEEEBSS-------TTSS-----------
T ss_pred Ceeee--CCcEEEEEEehhhccCc---cccccccccccchhhhh
Confidence 35555 79999999776665543 33455567789999986
No 141
>cd04263 DUF619-NAGK-FABP DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway. DUF619-NAGK-FABP: DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (FABP). The nuclear-encoded, mitochondrial polyprotein precursor (ARG5,6) consists of an N-terminal NAGK (ArgB) domain, a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved into two distinct enzymes (NAGK-DUF619 and NAGPR) in the mitochondria. Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. Arg5,6 catalyzes the second reaction of arginine biosynthesis; the phosphorylation of the gamma-carboxyl group of NAG to produce N-acetylglutamylphosphate (NAGP) which is subsequently converted to ornithine in two more steps. It also binds and regulates the promoters of nuclear and mitochondrial genes, and may possibly regu
Probab=53.17 E-value=57 Score=20.73 Aligned_cols=47 Identities=11% Similarity=0.111 Sum_probs=35.5
Q ss_pred eEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 111 HGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 111 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
.+++..++|...-++.|++..+.+.+.+.. +++...+.++|+ ..++|
T Consensus 33 vp~LdkF~vs~~~~l~~vaD~Vf~~i~~d~------p~L~W~~r~~n~-~~~W~ 79 (98)
T cd04263 33 VATLATFTITKSGWLNNVADNIFTAIKKDH------PKLVWTVREDDE-NLKWH 79 (98)
T ss_pred CEEEEEEEEccccccccHHHHHHHHHHhhC------CeeEEEeCCCCC-ccceE
Confidence 378999999999999999999888776553 357778887775 34443
No 142
>PF03376 Adeno_E3B: Adenovirus E3B protein; InterPro: IPR005041 Adenoviruses are medium-sized, non-enveloped viruses containing double-stranded DNA. They can cause a variety of diseases including pneumonia, cystitis, conjunctivitis and diarrhoea, all of which can be fatal to patients who are immunocompromised []. These viruses have many mechanisms to evade the host immune response, including several proteins which are expressed as part of the early transcription unit 3 (E3) []. One of the regions of E3, known as the E3B region, encodes three proteins known as 10.4K, 14.5K and 14.7K. Two of these proteins, 10.4K and 14.5K, form the RID complex (receptor internalisation and degradation) which protects the infected cell from host-induced lysis by clearing the the TNF and Fas receptors from the cell surface []. Other receptors, such as the epidermal growth factor receptor, are also known to be cleared by RID []. This entry represents the E3B region 10.4K protein, also known as the RID alpha subunit.; GO: 0016020 membrane
Probab=48.94 E-value=8.6 Score=22.30 Aligned_cols=13 Identities=54% Similarity=0.871 Sum_probs=10.5
Q ss_pred CcchhcccHHHHH
Q 031082 120 SPEYRRQQLAKKL 132 (166)
Q Consensus 120 ~p~~rg~Gig~~L 132 (166)
+|+||++.+++.|
T Consensus 53 hPqYrn~~iA~LL 65 (67)
T PF03376_consen 53 HPQYRNQQIAALL 65 (67)
T ss_pred CchhcCHHHHHHh
Confidence 6889988888765
No 143
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=48.93 E-value=1.3e+02 Score=24.25 Aligned_cols=66 Identities=12% Similarity=0.198 Sum_probs=37.0
Q ss_pred CeEEEEEcCCCeEEEEEEEEEecCCCceeEEEeEEEeCc--chhcccHHHHHHHHHHHHHHhhcCcEEEEE
Q 031082 83 DYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVSP--EYRRQQLAKKLMNLLEDISDKIDKAYFVDL 151 (166)
Q Consensus 83 ~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p--~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l 151 (166)
...+.+.+.+++++|.+++......... .+..+-=-| +|...-+-..+++.+.+++++ .++-.+.+
T Consensus 35 ~~~vgv~~d~~~v~aa~ll~~~~~~~g~--~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk-~~a~~lri 102 (406)
T PF02388_consen 35 VERVGVKDDGGEVAAAALLLRKKPFKGF--KYAYIPRGPVMDYSDEELLEFFLEELKKYAKK-KRALFLRI 102 (406)
T ss_dssp EEEEEEE-TTS-EEEEEEEEEEECTTTC--EEEEETT--EC-TT-HHHHHHHHHHHHHHHCT-TTEEEEEE
T ss_pred EEEEEEEeCCCeEEEEEEEEEeccCCce--eEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-CCEEEEEE
Confidence 3444455334777777755444332111 122222235 888999999999999999999 77755554
No 144
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=46.80 E-value=1.2e+02 Score=24.30 Aligned_cols=37 Identities=16% Similarity=0.324 Sum_probs=31.9
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEe
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFV 153 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v 153 (166)
.+.++|+.....+...|++.+.+.+++ .|+..+.+..
T Consensus 105 R~l~~~~~~~~~~~~~L~~~~~~~a~~-~~~Ss~h~lF 141 (370)
T PF04339_consen 105 RLLIAPGADRAALRAALLQALEQLAEE-NGLSSWHILF 141 (370)
T ss_pred ceeECCCCCHHHHHHHHHHHHHHHHHH-cCCCcceeec
Confidence 467788888899999999999999999 9998887753
No 145
>PF12652 CotJB: CotJB protein; InterPro: IPR024207 The cotJ operon proteins affect spore coat composition, and is controlled by sigma E. The genes, which include CotJB, are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat []. CotJB has been identified as a spore coat protein [].
Probab=45.42 E-value=3.8 Score=24.90 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 131 KLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 131 ~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
+||+.+...-+. .-=-.++|++++.+..|+..|+
T Consensus 3 ~LL~~I~~~~Fa-~~dl~LyLDTHP~d~~Al~~y~ 36 (78)
T PF12652_consen 3 ELLREIQEVSFA-VVDLNLYLDTHPDDQEALEYYN 36 (78)
T ss_pred HHHHHHHHHhhH-HHHHHHHhcCCCCcHHHHHHHH
Confidence 455555444444 2223688999999999998885
No 146
>PF04555 XhoI: Restriction endonuclease XhoI; InterPro: IPR007636 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry represents type II restriction enzymes such as XhoI (3.1.21.4 from EC), which recognises the double-stranded sequence CTCGAG and cleave after C-1 [].; GO: 0003677 DNA binding, 0009036 Type II site-specific deoxyribonuclease activity, 0009307 DNA restriction-modification system
Probab=44.99 E-value=80 Score=22.70 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=34.4
Q ss_pred EEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 116 AVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 116 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
.+-|+|+|+|..|.++.--.+.+...+ .-+...++.+.....
T Consensus 144 hFpv~p~F~g~SY~~Ry~ilc~rLv~e-~lY~aa~l~~s~~~~ 185 (196)
T PF04555_consen 144 HFPVDPEFKGASYLKRYEILCERLVQE-RLYTAACLITSPRSA 185 (196)
T ss_pred CCCccHHhcCCcHHHHHHHHHHHHHHh-cccceeEEEEeccCC
Confidence 367999999999999998888888888 888887777665443
No 147
>COG3543 Uncharacterized conserved protein [Function unknown]
Probab=41.63 E-value=33 Score=22.96 Aligned_cols=42 Identities=7% Similarity=0.169 Sum_probs=30.3
Q ss_pred eEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecC
Q 031082 115 TAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRAS 156 (166)
Q Consensus 115 ~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~ 156 (166)
+++.---.|||+||...+++.+-..+..+.....+-|...++
T Consensus 8 HHLlCmq~y~GkGYS~~FveN~d~I~~rL~~ge~i~lV~g~D 49 (135)
T COG3543 8 HHLLCMQGYQGKGYSPAFVENYDAIAERLKAGEDIKLVDGPD 49 (135)
T ss_pred hhhheeeecccccCCHHHHHHHHHHHHHhhcCCCeEEEeccc
Confidence 445556789999999999999988888755555555544433
No 148
>PF00571 CBS: CBS domain CBS domain web page. Mutations in the CBS domain of Swiss:P35520 lead to homocystinuria.; InterPro: IPR000644 CBS (cystathionine-beta-synthase) domains are small intracellular modules, mostly found in two or four copies within a protein, that occur in a variety of proteins in bacteria, archaea, and eukaryotes [, ]. Tandem pairs of CBS domains can act as binding domains for adenosine derivatives and may regulate the activity of attached enzymatic or other domains []. In some cases, CBS domains may act as sensors of cellular energy status by being activated by AMP and inhibited by ATP []. In chloride ion channels, the CBS domains have been implicated in intracellular targeting and trafficking, as well as in protein-protein interactions, but results vary with different channels: in the CLC-5 channel, the CBS domain was shown to be required for trafficking [], while in the CLC-1 channel, the CBS domain was shown to be critical for channel function, but not necessary for trafficking []. Recent experiments revealing that CBS domains can bind adenosine-containing ligands such ATP, AMP, or S-adenosylmethionine have led to the hypothesis that CBS domains function as sensors of intracellular metabolites [, ]. Crystallographic studies of CBS domains have shown that pairs of CBS sequences form a globular domain where each CBS unit adopts a beta-alpha-beta-beta-alpha pattern []. Crystal structure of the CBS domains of the AMP-activated protein kinase in complexes with AMP and ATP shows that the phosphate groups of AMP/ATP lie in a surface pocket at the interface of two CBS domains, which is lined with basic residues, many of which are associated with disease-causing mutations []. In humans, mutations in conserved residues within CBS domains cause a variety of human hereditary diseases, including (with the gene mutated in parentheses): homocystinuria (cystathionine beta-synthase); Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase); retinitis pigmentosa (IMP dehydrogenase-1); congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members).; GO: 0005515 protein binding; PDB: 3JTF_A 3TE5_C 3TDH_C 3T4N_C 2QLV_C 3OI8_A 3LV9_A 2QH1_B 1PVM_B 3LQN_A ....
Probab=41.32 E-value=57 Score=17.39 Aligned_cols=18 Identities=17% Similarity=0.350 Sum_probs=12.4
Q ss_pred CCeEEEEEcCCCeEEEEEE
Q 031082 82 PDYFHVAEGPGNRIMGYIM 100 (166)
Q Consensus 82 ~~~~~v~~~~~~~ivG~~~ 100 (166)
...+.|.. .+++++|.+.
T Consensus 30 ~~~~~V~d-~~~~~~G~is 47 (57)
T PF00571_consen 30 ISRLPVVD-EDGKLVGIIS 47 (57)
T ss_dssp SSEEEEES-TTSBEEEEEE
T ss_pred CcEEEEEe-cCCEEEEEEE
Confidence 34455554 6899999884
No 149
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=39.63 E-value=93 Score=24.42 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=60.6
Q ss_pred eEEEEcccccHHHHHHHHhhhcCC-----CcchHHHHHHhcc-----CCC--eEEEEEcCCCeEEEEEEEEEecC-----
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTE-----TFNMSFYMTYLAR-----WPD--YFHVAEGPGNRIMGYIMGKVEGQ----- 106 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~-----~~~~~~~~~~~~~-----~~~--~~~v~~~~~~~ivG~~~~~~~~~----- 106 (166)
--+|++.+.|++++..|....... .+..+.+...+.. +.+ ..+|++..+|.|-+|..+...+.
T Consensus 259 ~GlR~~e~kD~~~v~~L~~~y~~Rfel~~~f~~Eei~h~F~~~~~v~~~~v~~syvVe~p~gkItdFfsFyslp~t~i~n 338 (451)
T COG5092 259 EGLRLAEEKDMEDVARLYLEYSRRFELYEEFRFEEIVHTFRPVKNVVDKQVTYSYVVEEPNGKITDFFSFYSLPFTTIEN 338 (451)
T ss_pred cccchhhhhCHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcccccccccCceEEEEEEeCCCCccccceEEEeccceeecC
Confidence 458999999999999987553221 1111111111110 112 24566667899999886644331
Q ss_pred CCce---eEEEeEEEeCcchhc------ccH---HHHHHHHHHHHHHhhcCcEEEEEEeecCCh
Q 031082 107 GESW---HGHVTAVTVSPEYRR------QQL---AKKLMNLLEDISDKIDKAYFVDLFVRASNT 158 (166)
Q Consensus 107 ~~~~---~~~i~~l~V~p~~rg------~Gi---g~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~ 158 (166)
.... .+++.-.+.+..+.- +.+ -..|+..++-.|+. .|+......+..+|.
T Consensus 339 ~kykdiq~gYLYYya~d~~~kd~~~~a~~a~~~r~~e~v~Da~ilak~-~~~DVFNalt~~dN~ 401 (451)
T COG5092 339 KKYKDIQGGYLYYYAGDDQFKDFDPKATKALKTRVAEMVGDAMILAKV-EGCDVFNALTMMDNS 401 (451)
T ss_pred ccccccceeEEEEEccCccccccChHHHHHHHHHHHHHHHHHHHHHHH-cCCchhhhhhhccch
Confidence 1111 245555555542211 111 23455566667777 787766655555553
No 150
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=39.27 E-value=2e+02 Score=23.13 Aligned_cols=56 Identities=11% Similarity=-0.118 Sum_probs=42.5
Q ss_pred CCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEE
Q 031082 92 GNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLF 152 (166)
Q Consensus 92 ~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~ 152 (166)
++.+++.+++...+.. ++...-+.+++|+.-+-.-.|.-.++++|++ .|+..-.+.
T Consensus 301 ~~~~la~~l~~~~g~~----~~yly~gs~~~~~~~~~~~~l~~~~i~~a~~-~G~~~ydf~ 356 (406)
T PF02388_consen 301 DEIPLAGALFIYYGDE----AYYLYGGSDEEYRKFYAPYLLQWEAIKYAKE-KGIKRYDFG 356 (406)
T ss_dssp SEEEEEEEEEEEETTE----EEEEEEEE-CGCGGCTHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred CcceEEEEEEEEECCE----EEEEECccchhhHhcCcchHHHHHHHHHHHH-CCCCEEEee
Confidence 4457777766666553 4445568899999999999999999999999 999988874
No 151
>PF01751 Toprim: Toprim domain; InterPro: IPR006171 This is a conserved region from DNA primase. This corresponds to the Toprim (topoisomerase-primase) domain common to DnaG primases, topoisomerases, OLD family nucleases and RecR/M DNA repair proteins []. Both DnaG motifs IV and V are present in the alignment, the DxD (V) motif may be involved in Mg2+ binding and mutations to the conserved glutamate (IV) completely abolish DnaG type primase activity. DNA primase 2.7.7.6 from EC is a nucleotidyltransferase it synthesizes the oligoribonucleotide primers required for DNA replication on the lagging strand of the replication fork; it can also prime the leading stand and has been implicated in cell division []. This family also includes the atypical archaeal A subunit from type II DNA topoisomerases []. Type II DNA topoisomerases catalyse the relaxation of DNA supercoiling by causing transient double strand breaks.; PDB: 2ZJT_A 3IG0_A 3M4I_A 3NUH_B 1GKU_B 1GL9_C 3PWT_A 1CY4_A 1ECL_A 1CY7_A ....
Probab=39.19 E-value=31 Score=21.47 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=27.1
Q ss_pred eEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEE
Q 031082 115 TAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLF 152 (166)
Q Consensus 115 ~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~ 152 (166)
.-+++||+.-|.-|+..+++.+.....+ . ..++++.
T Consensus 63 iiiatD~D~EGe~Ia~~i~~~~~~~~~~-~-~~R~~~~ 98 (100)
T PF01751_consen 63 IIIATDPDREGELIAWEIIELLGKNNPK-L-IKRVWFS 98 (100)
T ss_dssp EEEEC-SSHHHHHHHHHHHHHHHHHSHH-H-TTEEEEE
T ss_pred eeecCCCChHHHHHHHHHHHHHhHhCCC-c-CCEEEEe
Confidence 4478999999999999999888877766 4 5666653
No 152
>PF09227 DUF1962: Domain of unknown function (DUF1962); InterPro: IPR015308 Members of this family of fungal proteins are functionally uncharacterised []. ; PDB: 1UOY_A.
Probab=38.14 E-value=17 Score=20.47 Aligned_cols=15 Identities=27% Similarity=0.652 Sum_probs=11.0
Q ss_pred cccCCcceeeeeeee
Q 031082 6 SCKNGLWKPIGVTIS 20 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~ 20 (166)
.|+||.|..+-+-.+
T Consensus 37 ecrggkwteiqdc~~ 51 (64)
T PF09227_consen 37 ECRGGKWTEIQDCGA 51 (64)
T ss_dssp EEETTEEEEEEE-SS
T ss_pred EecCCceEEeeecCc
Confidence 599999988766443
No 153
>COG4353 Uncharacterized conserved protein [Function unknown]
Probab=36.61 E-value=1.4e+02 Score=20.92 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=50.5
Q ss_pred CCeEEEEEEEEEecCCCceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhccc
Q 031082 92 GNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKISD 165 (166)
Q Consensus 92 ~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y~ 165 (166)
+|+.+|-+.+.. ....+..|+.-..|.|-++|.-+-.+|++.+-+.+.- ...++++...+++.-.++++
T Consensus 37 ~ge~l~~l~vF~--GR~yytPW~Eifnv~Pv~~gs~~E~~l~~~l~~~lsp---g~~lfVeYv~DrET~~~lqk 105 (192)
T COG4353 37 NGEQLGKLKVFK--GRDYYTPWLEIFNVNPVFRGSELEVKLYKVLYNFLSP---GGKLFVEYVRDRETRYRLQK 105 (192)
T ss_pred CCceeeEEEEEc--CCccccchhhccccCCccCCCHHHHHHHHHHHHhcCC---CCceEEEEEechhHHHHHHc
Confidence 477777664322 2235567788788999999999999999999888744 45688887778876666653
No 154
>cd01027 TOPRIM_RNase_M5_like TOPRIM_ RNase M5_like: The topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain found in Ribonuclease M5: (RNase M5) and other small primase-like proteins from bacteria and archaea. RNase M5 catalyzes the maturation of 5S rRNA in low G+C Gram-positive bacteria. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in nucleotide polymerization by primases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.
Probab=32.18 E-value=38 Score=20.52 Aligned_cols=24 Identities=21% Similarity=0.436 Sum_probs=20.1
Q ss_pred eEEEeCcchhcccHHHHHHHHHHH
Q 031082 115 TAVTVSPEYRRQQLAKKLMNLLED 138 (166)
Q Consensus 115 ~~l~V~p~~rg~Gig~~Ll~~~~~ 138 (166)
.-+.+|+|..|+-+.+++.+.+..
T Consensus 48 VIiltD~D~aG~~i~~~~~~~l~~ 71 (81)
T cd01027 48 VIILTDPDRKGEKIRKKLSEYLSG 71 (81)
T ss_pred EEEEECCCHHHHHHHHHHHHHhcc
Confidence 347899999999999999888743
No 155
>COG0375 HybF Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) [General function prediction only]
Probab=30.25 E-value=1.4e+02 Score=19.60 Aligned_cols=26 Identities=31% Similarity=0.396 Sum_probs=20.7
Q ss_pred cHHHHHHHHHHHHHHhhcCcE---EEEEEe
Q 031082 127 QLAKKLMNLLEDISDKIDKAY---FVDLFV 153 (166)
Q Consensus 127 Gig~~Ll~~~~~~a~~~~g~~---~i~l~v 153 (166)
.++..+++.++++|++ ++.. .++|.+
T Consensus 5 Sla~aii~~i~~~A~~-~~a~~V~~V~l~I 33 (115)
T COG0375 5 SLAQAIIELIEEQAEK-HGAKRVTAVWLEI 33 (115)
T ss_pred HHHHHHHHHHHHHHHH-cCCceEEEEEEEE
Confidence 5788999999999999 8884 555543
No 156
>COG1658 Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]
Probab=29.17 E-value=44 Score=22.33 Aligned_cols=22 Identities=23% Similarity=0.477 Sum_probs=19.7
Q ss_pred EEeCcchhcccHHHHHHHHHHH
Q 031082 117 VTVSPEYRRQQLAKKLMNLLED 138 (166)
Q Consensus 117 l~V~p~~rg~Gig~~Ll~~~~~ 138 (166)
+.+|||++|.=|.+.|.+++-.
T Consensus 60 ILTD~D~~Ge~Irk~l~~~l~~ 81 (127)
T COG1658 60 ILTDPDRKGERIRKKLKEYLPG 81 (127)
T ss_pred EEeCCCcchHHHHHHHHHHhcc
Confidence 6789999999999999998865
No 157
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=28.57 E-value=60 Score=21.81 Aligned_cols=21 Identities=10% Similarity=0.145 Sum_probs=17.6
Q ss_pred chhcccHHHHHHHHHHHHHHh
Q 031082 122 EYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
|=||-|+|+++++.+.+.+.+
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~ 26 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPE 26 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCC
Confidence 458999999999998887755
No 158
>PRK03681 hypA hydrogenase nickel incorporation protein; Validated
Probab=28.02 E-value=85 Score=20.39 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=20.3
Q ss_pred ccHHHHHHHHHHHHHHhhcCcE---EEEEEe
Q 031082 126 QQLAKKLMNLLEDISDKIDKAY---FVDLFV 153 (166)
Q Consensus 126 ~Gig~~Ll~~~~~~a~~~~g~~---~i~l~v 153 (166)
-+|...+++.+++.|++ .|.+ +++|.+
T Consensus 4 ~si~~~iv~~v~~~a~~-~~~~~V~~V~l~i 33 (114)
T PRK03681 4 ITLCQRALELIEQQAAK-HGAKRVTGVWLKI 33 (114)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCeEEEEEEEE
Confidence 36889999999999998 7655 444544
No 159
>COG2994 HlyC ACP:hemolysin acyltransferase (hemolysin-activating protein) [Posttranslational modification, protein turnover, chaperones]
Probab=27.19 E-value=1e+02 Score=21.09 Aligned_cols=71 Identities=10% Similarity=0.087 Sum_probs=40.5
Q ss_pred eEEEEEcCCCeEEEEEEEEEecCCC------------------ceeEEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcC
Q 031082 84 YFHVAEGPGNRIMGYIMGKVEGQGE------------------SWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDK 145 (166)
Q Consensus 84 ~~~v~~~~~~~ivG~~~~~~~~~~~------------------~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g 145 (166)
.+-+..|++|++|||+.....+++. +...+|.. .+.| -|-++.+.+.+....+. ..
T Consensus 53 Qf~ly~de~g~Piaf~~WA~vde~~e~~lL~~~~~l~p~dW~SG~~iwii~-~iAP----fGh~r~~~~dl~~~lFp-~~ 126 (148)
T COG2994 53 QFALYFDEHGRPIAFCTWAFVDEQAEEELLENDRNLSPEDWASGNNIWIID-WIAP----FGHSRQMVKDLHRNLFP-DR 126 (148)
T ss_pred ceEEEEcCCCCeeEEEEEeecCHHHHHHHHhCCCCCChhhccCCCeeEEEE-EEcc----CCchHHHHHHHHHHhCc-hh
Confidence 3444455799999999765544311 11233333 2233 46777777666666654 22
Q ss_pred cEEEEEEeecCChhhhh
Q 031082 146 AYFVDLFVRASNTPAIK 162 (166)
Q Consensus 146 ~~~i~l~v~~~N~~a~~ 162 (166)
.+..-++..|++.++
T Consensus 127 --~vr~~~~~~~dk~lR 141 (148)
T COG2994 127 --TVRALYHKGNDKGLR 141 (148)
T ss_pred --hhhheeecCCCcceE
Confidence 455666777776654
No 160
>KOG0538 consensus Glycolate oxidase [Energy production and conversion]
Probab=26.89 E-value=2.2e+02 Score=22.41 Aligned_cols=36 Identities=14% Similarity=0.028 Sum_probs=29.4
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEeec
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRA 155 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~ 155 (166)
.....++|.++ +.+.+.+.+.+.+ .|++.+.++|+.
T Consensus 122 ~rwfQLYvykd-------r~It~~Lv~raEk-~GfkAlvlTvDt 157 (363)
T KOG0538|consen 122 IRWFQLYVYKD-------RDITEQLVKRAEK-AGFKALVLTVDT 157 (363)
T ss_pred cEEEEEEecCc-------hHHHHHHHHHHHH-cCceEEEEEecc
Confidence 45677999998 5677777888888 999999998864
No 161
>COG4866 Uncharacterized conserved protein [Function unknown]
Probab=25.21 E-value=3.1e+02 Score=20.92 Aligned_cols=78 Identities=8% Similarity=0.039 Sum_probs=44.7
Q ss_pred eEEEEcccccHHHHHHHHhhhcCCCcc---------hHHHHHHhccC---CCeEEEEEcCCCeEEEEEEEEEecCCCcee
Q 031082 44 TTIRRFCCNDLLRFTSVNLDHLTETFN---------MSFYMTYLARW---PDYFHVAEGPGNRIMGYIMGKVEGQGESWH 111 (166)
Q Consensus 44 ~~ir~~~~~D~~~i~~l~~~~~~~~~~---------~~~~~~~~~~~---~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~ 111 (166)
...++++++.+.++.+.....+.-... -..+....++. +-.-.+.. .+++|+|+..+....+..
T Consensus 152 ~~yE~Is~~nl~EV~~FlKkW~e~~~~~s~~~L~nen~~il~~~e~~~~l~lkgllir-v~neI~aftL~e~ln~~~--- 227 (294)
T COG4866 152 FVYEKISPQNLKEVLEFLKKWFELESQTSDIGLINENKGILSVLENYESLDLKGLLIR-VNNEIVAFTLGEVLNEES--- 227 (294)
T ss_pred ceeeecCcccHHHHHHHHHHHHHHhcccccceeecccHHHHHHHhhccccCccceEEE-EccEEEEEEEEEeeCCce---
Confidence 457888888888888877665421110 01122222222 22234445 489999999887765543
Q ss_pred EEEeEEEeCcchhc
Q 031082 112 GHVTAVTVSPEYRR 125 (166)
Q Consensus 112 ~~i~~l~V~p~~rg 125 (166)
+-|+-=-.+++.+|
T Consensus 228 alIhiEk~l~d~~G 241 (294)
T COG4866 228 ALIHIEKALTDIAG 241 (294)
T ss_pred eeeehhhcchHHHH
Confidence 44554445667664
No 162
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=24.45 E-value=1.7e+02 Score=20.76 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=28.7
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHhhcCcEEEEEEe
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFV 153 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~g~~~i~l~v 153 (166)
.+|.+++-. +.|.++.|+..+...+.. .|++-+..+.
T Consensus 88 vEvGnLAs~----~~g~~~~l~~~l~~~L~~-~g~~w~vfTa 124 (179)
T PF12261_consen 88 VEVGNLASF----SPGAARLLFAALAQLLAQ-QGFEWVVFTA 124 (179)
T ss_pred eEeechhhc----CcccHHHHHHHHHHHHHH-CCCCEEEEeC
Confidence 456665544 589999999999999999 9988766653
No 163
>TIGR03527 selenium_YedF selenium metabolism protein YedF. Members of this protein family are about 200 amino acids in size, and include the uncharacterized YedF protein of Escherichia coli. This family shares an N-terminal domain, modeled by pfam01206, with the sulfurtransferase TusA (also called SirA). The C-terminal domain includes a typical redox-active disulfide motif, CGXC. This protein family found only among those genomes that also carry the selenium donor protein SelD, and its connection to selenium metabolism is indicated by the method of partial phylogenetic profiling vs. SelD. Its gene typically is found next to selD. Members of this family are found even when selenocysteine and selenouridine biosynthesis pathways are, except for SelD, completely absent, as in Enterococcus faecalis. Its role in selenium metabolism is unclear, but may include either detoxification or a role in labile selenoprotein biosynthesis.
Probab=23.51 E-value=2.3e+02 Score=20.36 Aligned_cols=35 Identities=11% Similarity=0.045 Sum_probs=28.6
Q ss_pred EEEeCcchhccc---HHHHHHHHHHHHHHhhcCc--EEEEE
Q 031082 116 AVTVSPEYRRQQ---LAKKLMNLLEDISDKIDKA--YFVDL 151 (166)
Q Consensus 116 ~l~V~p~~rg~G---ig~~Ll~~~~~~a~~~~g~--~~i~l 151 (166)
-+.+..+.=|+| +|+.||+..+..+.+ .+- .+|.+
T Consensus 87 ~v~i~~~~~G~g~~~LG~~Lm~~f~~~L~e-~~~~p~~Ifl 126 (194)
T TIGR03527 87 VVVITSDKLGEGDEELGRILMKGFIYTLSE-LDPLPKRILF 126 (194)
T ss_pred EEEEecCcCCCCcHHHHHHHHHHHHHHHHh-CCCCceEEEE
Confidence 577889999997 999999999999998 654 44444
No 164
>TIGR00100 hypA hydrogenase nickel insertion protein HypA. In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.
Probab=23.39 E-value=1.1e+02 Score=19.83 Aligned_cols=27 Identities=26% Similarity=0.418 Sum_probs=20.4
Q ss_pred ccHHHHHHHHHHHHHHhhcCcEE---EEEEe
Q 031082 126 QQLAKKLMNLLEDISDKIDKAYF---VDLFV 153 (166)
Q Consensus 126 ~Gig~~Ll~~~~~~a~~~~g~~~---i~l~v 153 (166)
.+|+..+++.+.+.+++ .+.++ +.|.+
T Consensus 4 ~sia~~iv~~v~~~a~~-~~~~~V~~V~l~i 33 (115)
T TIGR00100 4 LSLAEAMLEIVEEQAEK-HQAKKVTRVTLEI 33 (115)
T ss_pred HHHHHHHHHHHHHHHHH-hCCCeEEEEEEEE
Confidence 36889999999999988 77665 55544
No 165
>PHA02448 hypothetical protein
Probab=22.60 E-value=48 Score=22.28 Aligned_cols=11 Identities=27% Similarity=0.782 Sum_probs=9.6
Q ss_pred cCCcceeeeee
Q 031082 8 KNGLWKPIGVT 18 (166)
Q Consensus 8 ~~~~~~~~~~~ 18 (166)
+||+|+-+|+.
T Consensus 68 ~gglwirlt~~ 78 (192)
T PHA02448 68 HGGLWIRLTLC 78 (192)
T ss_pred CCCeEEEEEEe
Confidence 69999999975
No 166
>PF02268 TFIIA_gamma_N: Transcription initiation factor IIA, gamma subunit, helical domain; InterPro: IPR015872 Transcription factor IIA (TFIIA) is one of several factors that form part of a transcription pre-initiation complex along with RNA polymerase II, the TATA-box-binding protein (TBP) and TBP-associated factors, on the TATA-box sequence upstream of the initiation start site. After initiation, some components of the pre-initiation complex (including TFIIA) remain attached and re-initiate a subsequent round of transcription. TFIIA binds to TBP to stabilise TBP binding to the TATA element. TFIIA also inhibits the cytokine HMGB1 (high mobility group 1 protein) binding to TBP [], and can dissociate HMGB1 already bound to TBP/TATA-box. Human and Drosophila TFIIA have three subunits: two large subunits, LN/alpha and LC/beta, derived from the same gene, and a small subunit, S/gamma. Yeast TFIIA has two subunits: a large TOA1 subunit that shows sequence similarity to the N-terminal of LN/alpha and the C-terminal of LC/beta, and a small subunit, TOA2 that is highly homologous with S/gamma. The conserved regions of the large and small subunits of TFIIA combine to form two domains: a four-helix bundle (helical domain) composed of two helices from each of the N-terminal regions of TOA1 and TOA2 in yeast; and a beta-barrel (beta-barrel domain) composed of beta-sheets from the C-terminal regions of TOA1 and TOA2 []. This entry represents the alpha-helical domain found at the N-terminal of the gamma subunit of transcription factor TFIIA.; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005672 transcription factor TFIIA complex; PDB: 1NVP_D 1RM1_B 1YTF_D 1NH2_D.
Probab=21.96 E-value=1.5e+02 Score=16.18 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=18.3
Q ss_pred chhcccHHHHHHHHHHHHHHh
Q 031082 122 EYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 122 ~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
=||+.-+|..|.+.+-+...+
T Consensus 5 lYR~stlG~aL~dtLDeli~~ 25 (49)
T PF02268_consen 5 LYRRSTLGIALTDTLDELIQE 25 (49)
T ss_dssp GGGCSHHHHHHHHHHHHHHHT
T ss_pred HHHcchHHHHHHHHHHHHHHc
Confidence 489999999999999888776
No 167
>PRK00762 hypA hydrogenase nickel incorporation protein; Provisional
Probab=21.95 E-value=1.3e+02 Score=19.85 Aligned_cols=24 Identities=21% Similarity=0.272 Sum_probs=18.8
Q ss_pred ccHHHHHHHHHHHHHHhhcCcEEEE
Q 031082 126 QQLAKKLMNLLEDISDKIDKAYFVD 150 (166)
Q Consensus 126 ~Gig~~Ll~~~~~~a~~~~g~~~i~ 150 (166)
.+|...+++.+++.+++ .|..++.
T Consensus 4 ~si~~~il~~v~~~a~~-~~~~rV~ 27 (124)
T PRK00762 4 LSMACEIVEAVIDTAEK-NNATEVT 27 (124)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCeEE
Confidence 36889999999999988 7666544
No 168
>PF01830 Peptidase_C7: Peptidase C7 family; InterPro: IPR002704 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C7 (clan CA). These are found in fungi and viruses (Hypoviridae). They are involved in transmissible hypovirulence and may indicate the possible origins of hypovirulence-associated dsRNAs [].; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis
Probab=21.88 E-value=1.9e+02 Score=20.96 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=27.7
Q ss_pred EEEeEEEeCcchhcccHHHHHHHHHHHHHHh
Q 031082 112 GHVTAVTVSPEYRRQQLAKKLMNLLEDISDK 142 (166)
Q Consensus 112 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~ 142 (166)
.++.++.|++++|...=|..+.+++.+.+.+
T Consensus 211 ~h~YHvvVd~e~~se~dG~~fy~av~~laek 241 (243)
T PF01830_consen 211 DHVYHVVVDAENQSEQDGELFYQAVSDLAEK 241 (243)
T ss_pred cceEEEEechhhccccchHHHHHHHHHHHhc
Confidence 4688899999999999999999999988865
No 169
>PRK12380 hydrogenase nickel incorporation protein HybF; Provisional
Probab=21.72 E-value=1.3e+02 Score=19.47 Aligned_cols=27 Identities=11% Similarity=0.180 Sum_probs=19.9
Q ss_pred ccHHHHHHHHHHHHHHhhcCcE---EEEEEe
Q 031082 126 QQLAKKLMNLLEDISDKIDKAY---FVDLFV 153 (166)
Q Consensus 126 ~Gig~~Ll~~~~~~a~~~~g~~---~i~l~v 153 (166)
.+|...+++.+++.|++ .+.+ ++.|.+
T Consensus 4 lsi~~~iv~~v~~~a~~-~~~~rV~~V~l~i 33 (113)
T PRK12380 4 LSLCQSAVEIIQRQAEQ-HDVKRVTAVWLEI 33 (113)
T ss_pred HHHHHHHHHHHHHHHHH-hCCCeEEEEEEEE
Confidence 36888999999999988 7654 455544
No 170
>PF06557 DUF1122: Protein of unknown function (DUF1122); InterPro: IPR008304 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2ARH_C.
Probab=21.52 E-value=3e+02 Score=19.38 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=41.2
Q ss_pred CCeEEEEEEEEEecCCCceeEEEeEEEeCcchh----cccHHHHHHHHHHHHHHhhcCcEEEEEEeecCChhhhhcc
Q 031082 92 GNRIMGYIMGKVEGQGESWHGHVTAVTVSPEYR----RQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKIS 164 (166)
Q Consensus 92 ~~~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r----g~Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~Y 164 (166)
+++.++.+-+..-.. .+..|+.-+-++|.++ +.++-..|++.+-+++.. -..++++...+.+-...++
T Consensus 26 ~~~~l~~~kvF~GR~--yY~pW~EiFni~p~~~~~~~~s~~E~~l~~~~~~~l~p---g~~lfVeY~~D~eT~~~L~ 97 (170)
T PF06557_consen 26 GGRHLCHVKVFFGRP--YYRPWAEIFNINPWLRVVFFGSPLEDELYKLFSRYLEP---GGRLFVEYVEDRETRRQLQ 97 (170)
T ss_dssp TTEEEEEEEEE--BT--TB--EEEEE---GGGHHHHTTSHHHHHHHHHHHTT-------SEEEEE-TT-HHHHHHHH
T ss_pred CCeeEEEEEEecCCC--CCcchheeecccchhcccccCChHHHHHHHHHHHHhhh---cCeEEEEEecCHHHHHHHH
Confidence 677888885443333 4557788888999999 999999999888888755 3468887777766555544
No 171
>PF02334 RTP: Replication terminator protein; InterPro: IPR003432 The bacterial replication terminator protein (RTP) plays a role in the termination of DNA replication by impeding replication fork movement. Two RTP dimers bind to the two inverted repeat regions at the termination site.; GO: 0003677 DNA binding, 0006274 DNA replication termination; PDB: 2DPU_A 2DPD_A 1F4K_A 1J0R_B 2EFW_F 2DQR_B 1BM9_B.
Probab=21.28 E-value=28 Score=22.68 Aligned_cols=23 Identities=9% Similarity=-0.029 Sum_probs=15.4
Q ss_pred hhcccHHHHHHHHHHHHHHhhcCc
Q 031082 123 YRRQQLAKKLMNLLEDISDKIDKA 146 (166)
Q Consensus 123 ~rg~Gig~~Ll~~~~~~a~~~~g~ 146 (166)
.|++|+|.+|++.+-+..+. .|+
T Consensus 28 e~~r~Yg~q~Ld~lr~EFk~-~Gy 50 (122)
T PF02334_consen 28 EQERGYGLQLLDELRSEFKP-LGY 50 (122)
T ss_dssp HTT-EBCTCHHHHHHHHHTT-TT-
T ss_pred hcccchHHHHHHHHHHHhhh-cCC
Confidence 46778888888877777766 664
No 172
>KOG1669 consensus Predicted mRNA cap-binding protein related to eIF-4E [Translation, ribosomal structure and biogenesis]
Probab=21.19 E-value=41 Score=23.88 Aligned_cols=9 Identities=33% Similarity=1.095 Sum_probs=7.3
Q ss_pred CcccCCcce
Q 031082 5 RSCKNGLWK 13 (166)
Q Consensus 5 ~~~~~~~~~ 13 (166)
..||||-|+
T Consensus 102 aN~nGgkWi 110 (208)
T KOG1669|consen 102 ANCNGGKWI 110 (208)
T ss_pred CCCCCCeEE
Confidence 469999996
No 173
>PF08348 PAS_6: YheO-like PAS domain; InterPro: IPR013559 This domain is found in various hypothetical bacterial proteins that are similar to the Escherichia coli protein YheO (P64624 from SWISSPROT). Their function is unknown, but a few members are annotated as being HTH-containing proteins and putative DNA-binding proteins.
Probab=20.94 E-value=1.9e+02 Score=18.92 Aligned_cols=20 Identities=5% Similarity=0.188 Sum_probs=14.7
Q ss_pred EEEEEcCCCeEEEEEEEEEe
Q 031082 85 FHVAEGPGNRIMGYIMGKVE 104 (166)
Q Consensus 85 ~~v~~~~~~~ivG~~~~~~~ 104 (166)
.+++.+.+|+++|..++..+
T Consensus 86 T~~Ird~~g~~iG~LCIN~D 105 (118)
T PF08348_consen 86 TFFIRDENGKLIGALCINFD 105 (118)
T ss_pred EEEEECCCCCEEEEEEEEec
Confidence 55666667899999987664
No 174
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=20.75 E-value=1.2e+02 Score=22.58 Aligned_cols=30 Identities=17% Similarity=0.109 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHHHHHhhcCcEEEEEEeecCC
Q 031082 127 QLAKKLMNLLEDISDKIDKAYFVDLFVRASN 157 (166)
Q Consensus 127 Gig~~Ll~~~~~~a~~~~g~~~i~l~v~~~N 157 (166)
|-...|+..+.+.|++ .|+.+|...+...+
T Consensus 21 ~~~~~~~~~~~~~a~~-~~~~ki~~~~~~~~ 50 (266)
T TIGR03827 21 NDVEALIPDLDALAKK-EGYTKIIAKVPGSD 50 (266)
T ss_pred ccHHHHHHHHHHHHHH-cCCcEEEEEccHHH
Confidence 3478999999999999 99999999998876
No 175
>PF12162 STAT1_TAZ2bind: STAT1 TAZ2 binding domain; InterPro: IPR022752 This entry represents the C-terminal domain of STAT1, which selectively binds the TAZ2 domain of CRB (CREB-binding protein) []. This group of eukaryotic proteins is approximately 20 amino acids in length, and is found in association with PF02865 from PFAM, PF00017 from PFAM, PF01017 from PFAM, PF02864 from PFAM. By binding to CRB, it becomes a transcriptional activator and can initiate transcription of certain genes. ; GO: 0003700 sequence-specific DNA binding transcription factor activity; PDB: 2KA6_B.
Probab=20.28 E-value=64 Score=14.61 Aligned_cols=15 Identities=7% Similarity=0.115 Sum_probs=8.7
Q ss_pred EEEcccccHHHHHHH
Q 031082 46 IRRFCCNDLLRFTSV 60 (166)
Q Consensus 46 ir~~~~~D~~~i~~l 60 (166)
+-|++++|+.++..+
T Consensus 7 mmPMSPddy~~l~~~ 21 (23)
T PF12162_consen 7 MMPMSPDDYDELERM 21 (23)
T ss_dssp ---S-HHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHh
Confidence 457888898887664
Done!