Query 031084
Match_columns 166
No_of_seqs 122 out of 1341
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 09:00:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031084.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031084hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02395 glutathione S-transfe 100.0 8.7E-33 1.9E-37 190.8 17.9 165 1-166 47-211 (215)
2 PLN02473 glutathione S-transfe 100.0 4E-32 8.6E-37 187.4 17.6 164 1-165 48-211 (214)
3 PRK09481 sspA stringent starva 100.0 1.1E-30 2.4E-35 179.8 15.1 149 1-164 53-201 (211)
4 PRK10542 glutathionine S-trans 100.0 1.2E-29 2.7E-34 173.4 14.3 150 1-165 46-197 (201)
5 PRK13972 GSH-dependent disulfi 100.0 2.7E-29 5.9E-34 173.4 14.5 153 1-165 46-205 (215)
6 TIGR01262 maiA maleylacetoacet 100.0 1.3E-28 2.8E-33 169.4 16.4 156 1-164 46-203 (210)
7 PRK11752 putative S-transferas 100.0 5.5E-28 1.2E-32 171.2 16.9 156 1-165 95-258 (264)
8 PRK15113 glutathione S-transfe 100.0 2.3E-28 5.1E-33 168.6 13.5 155 1-165 53-208 (214)
9 PRK10357 putative glutathione 100.0 8.8E-28 1.9E-32 164.4 14.6 154 1-162 43-197 (202)
10 COG0625 Gst Glutathione S-tran 100.0 2.3E-27 5E-32 163.3 15.4 150 1-160 45-199 (211)
11 KOG0867 Glutathione S-transfer 99.9 8.9E-27 1.9E-31 161.3 14.1 159 1-164 48-208 (226)
12 PTZ00057 glutathione s-transfe 99.9 2.9E-26 6.2E-31 157.2 15.3 144 1-165 53-199 (205)
13 KOG0406 Glutathione S-transfer 99.9 3.1E-26 6.7E-31 155.3 13.3 150 2-163 53-209 (231)
14 KOG0868 Glutathione S-transfer 99.9 2.9E-24 6.3E-29 138.1 13.7 152 1-163 52-205 (217)
15 KOG1695 Glutathione S-transfer 99.9 2.2E-24 4.7E-29 145.3 12.9 151 2-165 47-200 (206)
16 PLN02378 glutathione S-transfe 99.9 7.1E-25 1.5E-29 151.0 10.2 140 1-164 54-198 (213)
17 TIGR00862 O-ClC intracellular 99.9 8.4E-24 1.8E-28 146.5 13.5 144 1-163 53-218 (236)
18 PRK10387 glutaredoxin 2; Provi 99.9 5.2E-24 1.1E-28 146.5 10.0 147 1-159 42-207 (210)
19 PLN02817 glutathione dehydroge 99.9 1.4E-23 3.1E-28 148.2 12.1 140 1-164 107-250 (265)
20 PLN02907 glutamate-tRNA ligase 99.9 4.9E-22 1.1E-26 155.9 13.1 126 2-158 33-159 (722)
21 TIGR02182 GRXB Glutaredoxin, G 99.9 3.8E-22 8.3E-27 137.1 9.2 147 1-159 41-206 (209)
22 KOG4420 Uncharacterized conser 99.8 5.2E-20 1.1E-24 125.1 11.0 162 1-165 72-287 (325)
23 cd03187 GST_C_Phi GST_C family 99.8 1.2E-18 2.5E-23 109.4 11.4 117 46-163 2-118 (118)
24 cd03196 GST_C_5 GST_C family, 99.8 1.3E-18 2.9E-23 108.7 8.5 113 42-162 2-114 (115)
25 cd03178 GST_C_Ure2p_like GST_C 99.8 8E-18 1.7E-22 104.9 9.4 113 46-164 1-113 (113)
26 cd03188 GST_C_Beta GST_C famil 99.8 3.8E-18 8.3E-23 106.4 7.7 113 46-163 2-114 (114)
27 cd03181 GST_C_EFB1gamma GST_C 99.7 5.2E-17 1.1E-21 102.7 9.3 115 47-165 2-116 (123)
28 cd03180 GST_C_2 GST_C family, 99.7 1E-16 2.2E-21 99.3 10.1 109 46-159 2-110 (110)
29 cd03186 GST_C_SspA GST_N famil 99.7 6.5E-17 1.4E-21 99.8 9.1 105 45-162 2-106 (107)
30 cd03183 GST_C_Theta GST_C fami 99.7 1.3E-16 2.9E-21 101.3 10.7 116 47-164 2-121 (126)
31 cd03190 GST_C_ECM4_like GST_C 99.7 7.2E-17 1.6E-21 104.5 9.6 110 45-164 3-117 (142)
32 cd03189 GST_C_GTT1_like GST_C 99.7 1.1E-16 2.5E-21 100.6 9.8 114 41-157 2-119 (119)
33 cd03191 GST_C_Zeta GST_C famil 99.7 1.5E-16 3.3E-21 100.3 10.3 115 45-164 2-118 (121)
34 cd03182 GST_C_GTT2_like GST_C 99.7 9E-17 2E-21 100.7 9.2 115 43-159 1-117 (117)
35 cd03185 GST_C_Tau GST_C family 99.7 5.5E-17 1.2E-21 103.0 8.3 109 45-164 2-114 (126)
36 cd03177 GST_C_Delta_Epsilon GS 99.7 2.6E-16 5.7E-21 98.8 8.8 109 46-163 2-110 (118)
37 cd03209 GST_C_Mu GST_C family, 99.6 2.1E-15 4.6E-20 95.1 9.6 108 46-165 2-109 (121)
38 cd03184 GST_C_Omega GST_C fami 99.6 1.3E-15 2.9E-20 96.4 7.8 106 46-164 2-112 (124)
39 cd03207 GST_C_8 GST_C family, 99.6 1.4E-15 3E-20 93.3 6.5 100 52-165 3-102 (103)
40 cd03208 GST_C_Alpha GST_C fami 99.6 4.4E-15 9.6E-20 95.5 8.8 76 88-165 38-115 (137)
41 cd03200 GST_C_JTV1 GST_C famil 99.6 4.4E-15 9.6E-20 89.7 8.2 95 24-155 1-95 (96)
42 KOG4244 Failed axon connection 99.6 3.1E-14 6.6E-19 97.7 12.2 149 2-156 89-273 (281)
43 cd03179 GST_C_1 GST_C family, 99.6 2.5E-15 5.4E-20 92.3 6.2 104 46-154 2-105 (105)
44 cd03210 GST_C_Pi GST_C family, 99.6 2.2E-14 4.9E-19 91.0 9.8 78 86-165 32-112 (126)
45 cd03195 GST_C_4 GST_C family, 99.6 5.9E-15 1.3E-19 92.0 6.9 110 45-164 2-112 (114)
46 PF00043 GST_C: Glutathione S- 99.6 8.5E-15 1.8E-19 88.4 6.8 74 83-157 22-95 (95)
47 cd03206 GST_C_7 GST_C family, 99.6 1.1E-14 2.3E-19 88.8 6.7 99 51-159 2-100 (100)
48 cd03198 GST_C_CLIC GST_C famil 99.6 2.3E-14 5E-19 90.9 7.4 82 82-163 22-122 (134)
49 PF13410 GST_C_2: Glutathione 99.5 3E-14 6.4E-19 80.9 6.9 68 85-152 2-69 (69)
50 KOG1422 Intracellular Cl- chan 99.5 1.4E-13 3.1E-18 91.4 10.9 142 1-162 55-202 (221)
51 COG0435 ECM4 Predicted glutath 99.5 2.6E-14 5.7E-19 98.5 7.1 145 5-162 128-283 (324)
52 cd03194 GST_C_3 GST_C family, 99.5 1.4E-13 3E-18 85.8 9.0 106 52-164 5-113 (114)
53 cd03203 GST_C_Lambda GST_C fam 99.5 2E-13 4.3E-18 85.9 9.8 104 43-164 1-110 (120)
54 cd03204 GST_C_GDAP1 GST_C fami 99.5 5.5E-14 1.2E-18 86.5 6.6 79 81-159 21-111 (111)
55 KOG3027 Mitochondrial outer me 99.5 1.1E-12 2.4E-17 86.9 11.0 151 1-156 62-248 (257)
56 cd03201 GST_C_DHAR GST_C famil 99.5 1.6E-13 3.4E-18 86.4 5.6 77 88-164 29-109 (121)
57 cd00299 GST_C_family Glutathio 99.5 2.1E-13 4.6E-18 82.7 6.0 99 51-153 2-100 (100)
58 KOG2903 Predicted glutathione 99.4 3.4E-13 7.3E-18 92.3 5.6 145 5-162 122-285 (319)
59 PF14497 GST_C_3: Glutathione 99.4 3.2E-12 6.9E-17 77.7 6.8 67 85-155 31-99 (99)
60 cd03192 GST_C_Sigma_like GST_C 99.4 3.6E-12 7.8E-17 78.1 6.9 101 46-153 2-104 (104)
61 cd03202 GST_C_etherase_LigE GS 99.3 3.6E-12 7.9E-17 80.6 6.4 68 87-155 56-123 (124)
62 cd03193 GST_C_Metaxin GST_C fa 99.3 6.3E-12 1.4E-16 74.7 6.5 66 89-154 19-88 (88)
63 cd03211 GST_C_Metaxin2 GST_C f 99.2 5.5E-11 1.2E-15 75.3 6.4 68 86-154 54-126 (126)
64 COG2999 GrxB Glutaredoxin 2 [P 99.2 7.4E-10 1.6E-14 72.0 10.6 142 5-161 46-209 (215)
65 cd03205 GST_C_6 GST_C family, 99.2 1.1E-10 2.4E-15 70.7 6.5 71 80-153 28-98 (98)
66 KOG3029 Glutathione S-transfer 99.1 2.8E-10 6.1E-15 79.1 8.2 66 90-156 289-355 (370)
67 PF14834 GST_C_4: Glutathione 99.1 1.3E-09 2.7E-14 66.2 9.8 112 43-164 1-113 (117)
68 cd03212 GST_C_Metaxin1_3 GST_C 99.1 2E-10 4.3E-15 73.7 6.8 72 84-155 59-134 (137)
69 KOG3028 Translocase of outer m 99.0 1.4E-08 3.1E-13 71.7 13.0 152 2-156 45-234 (313)
70 cd03061 GST_N_CLIC GST_N famil 99.0 5E-10 1.1E-14 66.3 4.2 33 1-33 56-88 (91)
71 cd03197 GST_C_mPGES2 GST_C fam 99.0 1.3E-09 2.7E-14 70.1 5.9 64 91-155 81-145 (149)
72 PF13417 GST_N_3: Glutathione 99.0 5.5E-10 1.2E-14 64.3 3.8 33 1-33 41-73 (75)
73 cd03050 GST_N_Theta GST_N fami 99.0 8.8E-10 1.9E-14 63.6 3.9 31 1-31 46-76 (76)
74 cd03046 GST_N_GTT1_like GST_N 98.9 1.2E-09 2.6E-14 63.0 4.2 31 1-31 45-75 (76)
75 cd03052 GST_N_GDAP1 GST_N fami 98.9 6.8E-10 1.5E-14 63.6 3.1 28 1-28 46-73 (73)
76 cd03057 GST_N_Beta GST_N famil 98.9 1.1E-09 2.3E-14 63.4 3.8 32 1-32 45-77 (77)
77 cd03048 GST_N_Ure2p_like GST_N 98.9 1.8E-09 4E-14 63.0 4.1 32 1-32 46-80 (81)
78 cd03075 GST_N_Mu GST_N family, 98.9 1.8E-09 3.9E-14 63.2 3.9 29 3-31 54-82 (82)
79 cd03076 GST_N_Pi GST_N family, 98.9 1.6E-09 3.5E-14 62.0 3.6 29 1-29 44-72 (73)
80 cd03080 GST_N_Metaxin_like GST 98.9 2.3E-09 4.9E-14 61.7 4.1 31 1-31 44-74 (75)
81 cd03038 GST_N_etherase_LigE GS 98.9 2.2E-09 4.8E-14 63.1 3.6 32 1-32 52-84 (84)
82 cd03059 GST_N_SspA GST_N famil 98.9 3.1E-09 6.8E-14 60.7 4.1 31 1-31 43-73 (73)
83 cd03077 GST_N_Alpha GST_N fami 98.9 5.1E-09 1.1E-13 60.8 4.5 30 2-31 47-76 (79)
84 PF02798 GST_N: Glutathione S- 98.8 4E-09 8.6E-14 60.9 3.6 29 1-29 46-76 (76)
85 cd03053 GST_N_Phi GST_N family 98.8 4.2E-09 9E-14 60.7 3.7 30 1-30 47-76 (76)
86 cd03039 GST_N_Sigma_like GST_N 98.8 4.2E-09 9.2E-14 60.1 3.6 29 1-29 44-72 (72)
87 PF13409 GST_N_2: Glutathione 98.8 4E-09 8.7E-14 59.8 3.4 29 1-29 40-69 (70)
88 cd03058 GST_N_Tau GST_N family 98.8 6.1E-09 1.3E-13 59.7 3.8 31 1-31 43-74 (74)
89 cd03045 GST_N_Delta_Epsilon GS 98.8 5.1E-09 1.1E-13 60.0 3.5 29 1-29 46-74 (74)
90 cd03047 GST_N_2 GST_N family, 98.8 5.3E-09 1.2E-13 59.8 3.2 28 1-28 46-73 (73)
91 cd03041 GST_N_2GST_N GST_N fam 98.8 1E-08 2.3E-13 59.2 3.8 31 1-31 45-77 (77)
92 cd03043 GST_N_1 GST_N family, 98.7 1E-08 2.2E-13 58.7 3.2 28 1-28 46-73 (73)
93 cd03079 GST_N_Metaxin2 GST_N f 98.7 1.3E-08 2.9E-13 57.9 3.6 30 1-30 45-74 (74)
94 cd03044 GST_N_EF1Bgamma GST_N 98.7 1.5E-08 3.3E-13 58.2 3.4 29 1-29 45-74 (75)
95 cd03042 GST_N_Zeta GST_N famil 98.7 1.6E-08 3.4E-13 57.7 3.1 28 1-28 46-73 (73)
96 cd03056 GST_N_4 GST_N family, 98.7 2.3E-08 5E-13 57.0 3.2 28 1-28 46-73 (73)
97 cd03054 GST_N_Metaxin GST_N fa 98.6 5.5E-08 1.2E-12 55.4 3.6 30 1-30 43-72 (72)
98 cd03060 GST_N_Omega_like GST_N 98.6 5.3E-08 1.2E-12 55.3 3.1 27 1-27 43-70 (71)
99 cd03049 GST_N_3 GST_N family, 98.5 5.4E-08 1.2E-12 55.6 2.6 28 1-28 45-73 (73)
100 cd03037 GST_N_GRX2 GST_N famil 98.5 8E-08 1.7E-12 54.5 2.9 29 1-29 42-71 (71)
101 cd03051 GST_N_GTT2_like GST_N 98.5 8.2E-08 1.8E-12 54.8 2.8 28 1-28 46-74 (74)
102 cd03040 GST_N_mPGES2 GST_N fam 98.4 2.8E-07 6.1E-12 53.1 3.7 31 1-31 42-76 (77)
103 cd00570 GST_N_family Glutathio 98.3 1.1E-06 2.3E-11 49.2 3.3 28 1-28 44-71 (71)
104 PF04399 Glutaredoxin2_C: Glut 98.2 1.9E-05 4.1E-10 50.1 8.2 69 87-160 57-125 (132)
105 KOG1147 Glutamyl-tRNA syntheta 98.2 2.4E-06 5.1E-11 65.0 4.4 120 12-163 43-162 (712)
106 cd03078 GST_N_Metaxin1_like GS 98.1 4.9E-06 1.1E-10 47.4 3.7 29 2-30 44-72 (73)
107 cd03199 GST_C_GRX2 GST_C famil 98.0 4.8E-05 1E-09 47.9 7.6 66 89-159 60-125 (128)
108 PF10568 Tom37: Outer mitochon 97.3 0.00038 8.3E-09 39.5 3.4 27 1-27 44-71 (72)
109 TIGR02190 GlrX-dom Glutaredoxi 94.1 0.049 1.1E-06 31.3 2.3 27 2-28 53-79 (79)
110 PF11801 Tom37_C: Tom37 C-term 93.7 0.21 4.6E-06 33.2 5.0 38 94-131 113-154 (168)
111 cd03029 GRX_hybridPRX5 Glutare 91.4 0.26 5.6E-06 27.5 2.7 26 3-28 47-72 (72)
112 KOG1668 Elongation factor 1 be 90.6 0.41 8.9E-06 33.3 3.5 59 95-160 10-68 (231)
113 PRK10638 glutaredoxin 3; Provi 85.2 1.5 3.2E-05 25.2 3.2 28 2-29 48-75 (83)
114 PF09635 MetRS-N: MetRS-N bind 83.7 0.55 1.2E-05 29.3 0.9 30 2-31 31-62 (122)
115 TIGR02196 GlrX_YruB Glutaredox 83.0 2 4.2E-05 23.5 3.0 26 2-27 46-73 (74)
116 cd02066 GRX_family Glutaredoxi 82.5 1.8 3.8E-05 23.5 2.7 25 2-26 46-70 (72)
117 TIGR02183 GRXA Glutaredoxin, G 82.1 2.8 6.1E-05 24.3 3.5 27 5-31 56-82 (86)
118 PRK11200 grxA glutaredoxin 1; 81.7 3.7 8.1E-05 23.6 3.9 27 5-31 57-83 (85)
119 cd02976 NrdH NrdH-redoxin (Nrd 81.2 1.5 3.3E-05 23.9 2.1 19 2-20 46-64 (73)
120 TIGR02681 phage_pRha phage reg 72.6 4.9 0.00011 24.7 2.7 26 7-32 2-28 (108)
121 TIGR02200 GlrX_actino Glutared 65.3 6.4 0.00014 21.7 2.1 18 3-20 48-66 (77)
122 PF11732 Thoc2: Transcription- 62.0 13 0.00028 21.4 2.8 42 109-154 35-76 (77)
123 PRK15371 effector protein YopJ 59.9 41 0.00088 24.7 5.7 66 89-155 23-88 (287)
124 cd03027 GRX_DEP Glutaredoxin ( 54.2 17 0.00037 20.0 2.5 23 2-24 47-69 (73)
125 cd03418 GRX_GRXb_1_3_like Glut 53.9 22 0.00048 19.5 3.0 23 6-28 51-73 (75)
126 cd03419 GRX_GRXh_1_2_like Glut 53.3 22 0.00048 19.8 3.0 26 4-29 51-76 (82)
127 PF03421 YopJ: YopJ Serine/Thr 51.8 43 0.00093 22.6 4.5 63 92-155 2-64 (177)
128 PF10022 DUF2264: Uncharacteri 49.9 1.1E+02 0.0025 23.3 9.1 102 10-124 101-207 (361)
129 TIGR01764 excise DNA binding d 48.5 33 0.00072 16.7 3.2 24 5-28 25-48 (49)
130 PRK10329 glutaredoxin-like pro 47.9 22 0.00049 20.3 2.4 18 2-19 46-63 (81)
131 TIGR02180 GRX_euk Glutaredoxin 45.9 36 0.00078 19.0 3.1 24 5-28 53-76 (84)
132 TIGR02181 GRX_bact Glutaredoxi 44.1 37 0.00081 18.9 3.0 26 4-29 47-72 (79)
133 PF04564 U-box: U-box domain; 42.6 61 0.0013 18.1 4.2 24 6-30 15-38 (73)
134 PF11417 Inhibitor_G39P: Loade 41.9 65 0.0014 18.1 5.8 37 19-58 5-41 (71)
135 COG0695 GrxC Glutaredoxin and 38.0 57 0.0012 18.6 3.1 26 2-27 49-74 (80)
136 PF10757 YbaJ: Biofilm formati 36.8 35 0.00077 21.2 2.1 8 22-29 50-57 (122)
137 PF12622 NpwBP: mRNA biogenesi 36.5 19 0.00042 18.5 0.8 10 1-10 11-20 (48)
138 TIGR03412 iscX_yfhJ FeS assemb 36.0 71 0.0015 17.5 3.0 16 18-33 3-18 (63)
139 PRK10667 Hha toxicity attenuat 32.6 48 0.001 20.6 2.2 15 41-55 67-81 (122)
140 PRK10721 hypothetical protein; 31.8 84 0.0018 17.4 2.8 16 18-33 6-21 (66)
141 PF12728 HTH_17: Helix-turn-he 31.0 78 0.0017 15.9 3.5 25 5-29 25-49 (51)
142 PF00392 GntR: Bacterial regul 29.4 81 0.0018 16.8 2.7 27 96-122 4-31 (64)
143 PF09098 Dehyd-heme_bind: Quin 28.5 42 0.0009 22.4 1.5 15 18-32 54-68 (167)
144 PF06528 Phage_P2_GpE: Phage P 28.3 34 0.00073 16.8 0.9 16 142-157 19-34 (39)
145 PF03711 OKR_DC_1_C: Orn/Lys/A 28.0 39 0.00085 21.7 1.3 26 6-31 88-113 (136)
146 cd03028 GRX_PICOT_like Glutare 25.8 1.2E+02 0.0027 17.5 3.2 24 4-27 61-84 (90)
147 PHA02776 E7 protein; Provision 25.4 32 0.00069 20.9 0.6 13 111-123 1-13 (101)
148 PF07862 Nif11: Nitrogen fixat 24.4 1.1E+02 0.0024 15.4 2.5 19 145-163 5-23 (49)
149 COG2975 Uncharacterized protei 22.9 1.2E+02 0.0027 16.3 2.4 16 18-33 4-19 (64)
150 cd01976 Nitrogenase_MoFe_alpha 21.6 3.2E+02 0.007 21.2 5.5 83 22-123 233-316 (421)
151 TIGR02189 GlrX-like_plant Glut 20.6 1.9E+02 0.0041 17.2 3.3 23 3-25 58-80 (99)
No 1
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=8.7e-33 Score=190.81 Aligned_cols=165 Identities=72% Similarity=1.246 Sum_probs=131.8
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||.|+||+|+++|.+|+||.+|++||+++|+..+. +++|.++.+++++++|+.++...+.+.+........+....+.
T Consensus 47 ~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~-~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (215)
T PLN02395 47 LQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGP-DLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGF 125 (215)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCc-CcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccC
Confidence 699999999999999999999999999999975433 5889999999999999999888887765544433322222222
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHH
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWK 160 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 160 (166)
...+...+...+.+.+.++.+|++|++++|++|+++|+||+++++++.++............+|+|.+|++++.++|+++
T Consensus 126 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k 205 (215)
T PLN02395 126 PADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWK 205 (215)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHH
Confidence 33444566778889999999999999889999999999999999988776432111123577999999999999999999
Q ss_pred HHHhhC
Q 031084 161 KVLELY 166 (166)
Q Consensus 161 ~~~~~~ 166 (166)
+++.+|
T Consensus 206 ~~~~~~ 211 (215)
T PLN02395 206 EVLAKY 211 (215)
T ss_pred HHHHHh
Confidence 998875
No 2
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=4e-32 Score=187.40 Aligned_cols=164 Identities=46% Similarity=0.887 Sum_probs=129.2
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||+|+||+|++||.+|+||.+|++||++++++.+. +++|.++.+++++++|+.+..+.+...+..........+..+.
T Consensus 48 ~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~-~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (214)
T PLN02473 48 RQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGT-DLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGE 126 (214)
T ss_pred hCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccC
Confidence 599999999999999999999999999999975433 5889999999999999998877666544333323333222233
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHH
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWK 160 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 160 (166)
..+....+...+++.+.++.+|++|++++|++|+++|+||+++++.+.++..........+++|+|.+|++++.++|+++
T Consensus 127 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~ 206 (214)
T PLN02473 127 PCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWK 206 (214)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhH
Confidence 44455566777889999999999999889999999999999999988765432111113578999999999999999999
Q ss_pred HHHhh
Q 031084 161 KVLEL 165 (166)
Q Consensus 161 ~~~~~ 165 (166)
+++++
T Consensus 207 ~~~~~ 211 (214)
T PLN02473 207 KLMEL 211 (214)
T ss_pred HHHHH
Confidence 98764
No 3
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.97 E-value=1.1e-30 Score=179.79 Aligned_cols=149 Identities=20% Similarity=0.276 Sum_probs=119.0
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||.|+||+|+++|.+|+||.||++||+++|+.. .++|.++.++++++.|+.++...+...... . .
T Consensus 53 ~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~---~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~-----~-~----- 118 (211)
T PRK09481 53 LNPYQSVPTLVDRELTLYESRIIMEYLDERFPHP---PLMPVYPVARGESRLMMHRIEKDWYSLMNK-----I-V----- 118 (211)
T ss_pred hCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----H-h-----
Confidence 6999999999999999999999999999999753 688999999999999998766543221110 0 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHH
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWK 160 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 160 (166)
...+...+...+.+...++.+|++|++++|++|+++|+||+++++.+.++..... ......+|+|.+|++++.++|+++
T Consensus 119 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~-~~~~~~~p~l~~w~~~~~~rp~~~ 197 (211)
T PRK09481 119 NGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGI-ELSGPGAKELKGYMTRVFERDSFL 197 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCC-CCCCCCChhHHHHHHHHhccHHHH
Confidence 1123345667788999999999999989999999999999999999877653322 112257999999999999999999
Q ss_pred HHHh
Q 031084 161 KVLE 164 (166)
Q Consensus 161 ~~~~ 164 (166)
++++
T Consensus 198 ~~~~ 201 (211)
T PRK09481 198 ASLT 201 (211)
T ss_pred HHcC
Confidence 8764
No 4
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.97 E-value=1.2e-29 Score=173.42 Aligned_cols=150 Identities=20% Similarity=0.318 Sum_probs=120.0
Q ss_pred CCCCCCcceEe-eCCeEEeehHHHHHHHHHhhccCCCcCCC-CCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhcc
Q 031084 1 MVPFGSLPVIQ-DGDFTLYESRAIIRYYAEKYKSQGTTDLL-GRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKR 78 (166)
Q Consensus 1 inP~~~vP~L~-~~~~~l~es~~I~~yL~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (166)
+||.|+||+|+ +||.+|+||.+|++||++.+++. .++ |.++.+++++++|+.+....+.+.+...+
T Consensus 46 ~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~---~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~--------- 113 (201)
T PRK10542 46 INPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDR---QLLAPVGSLSRYHTIEWLNYIATELHKGFTPLF--------- 113 (201)
T ss_pred hCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCccc---ccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhcc---------
Confidence 69999999998 68899999999999999999754 444 56788999999999988766654332211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhh
Q 031084 79 GLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLS 158 (166)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 158 (166)
.....+...+...+.+.+.++.+|+.|++++|++|+++|+||+++++++.+..... +....+|+|.+|++++.++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~---~~~~~~p~l~~w~~~~~~~p~ 190 (201)
T PRK10542 114 RPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVK---LNLEGLEHIAAYMQRVAERPA 190 (201)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccC---CCcccchHHHHHHHHHHcCHH
Confidence 11222334456678899999999999998999999999999999999988765432 235689999999999999999
Q ss_pred HHHHHhh
Q 031084 159 WKKVLEL 165 (166)
Q Consensus 159 ~~~~~~~ 165 (166)
+++++..
T Consensus 191 ~k~~~~~ 197 (201)
T PRK10542 191 VAAALKA 197 (201)
T ss_pred HHHHHHH
Confidence 9998763
No 5
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.97 E-value=2.7e-29 Score=173.36 Aligned_cols=153 Identities=25% Similarity=0.375 Sum_probs=118.1
Q ss_pred CCCCCCcceEee-----CC--eEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHH
Q 031084 1 MVPFGSLPVIQD-----GD--FTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQIL 73 (166)
Q Consensus 1 inP~~~vP~L~~-----~~--~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (166)
+||.|+||+|++ || .+|+||.||++||++.++ .+.|.++.+++++++|+.|....+.+.+.... .
T Consensus 46 iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~-----~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~---~ 117 (215)
T PRK13972 46 ISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG-----LFLSHETRERAATLQWLFWQVGGLGPMLGQNH---H 117 (215)
T ss_pred hCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHhhccCcceeeee---e
Confidence 699999999996 45 479999999999999983 45677889999999999998877765432110 0
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHH
Q 031084 74 FFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 153 (166)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 153 (166)
+.. ......+...+...+.+.+.+..+|++|++++|++|+++|+|||++++.+...... .+....+|+|.+|++++
T Consensus 118 ~~~-~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~---~~~~~~~P~l~~w~~r~ 193 (215)
T PRK13972 118 FNH-AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQ---RIDLAMYPAVKNWHERI 193 (215)
T ss_pred eec-cCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhc---CCcchhCHHHHHHHHHH
Confidence 000 01122334556677889999999999999899999999999999998877543322 12457899999999999
Q ss_pred hhhhhHHHHHhh
Q 031084 154 SNRLSWKKVLEL 165 (166)
Q Consensus 154 ~~~p~~~~~~~~ 165 (166)
.++|++++++.+
T Consensus 194 ~~rp~~~~~~~~ 205 (215)
T PRK13972 194 RSRPATGQALLK 205 (215)
T ss_pred HhCHHHHHHHHH
Confidence 999999988764
No 6
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.96 E-value=1.3e-28 Score=169.40 Aligned_cols=156 Identities=21% Similarity=0.190 Sum_probs=120.8
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||.|+||+|+++|.+|+||.+|++||++.+++. ++.|.++.+++++++|+.++...+............ ....+
T Consensus 46 ~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~---~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 120 (210)
T TIGR01262 46 LNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDP---PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYL-REKLG- 120 (210)
T ss_pred cCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCC---CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHH-HhhcC-
Confidence 6999999999999999999999999999999753 688989999999999999887666543221111111 11111
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcC--CccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhh
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSK--SKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLS 158 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~--~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 158 (166)
.......+...+.+.+.|+.+|++|++ ++|++|+++|+||+++++++.++... ....+.+|+|.+|+++|.++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~---~~~~~~~p~l~~~~~~~~~rp~ 197 (210)
T TIGR01262 121 VEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERF---GVDLTPYPTLRRIAAALAALPA 197 (210)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHc---CCCcccchHHHHHHHHHhcCHH
Confidence 122233445566799999999999986 46999999999999999999876532 1235789999999999999999
Q ss_pred HHHHHh
Q 031084 159 WKKVLE 164 (166)
Q Consensus 159 ~~~~~~ 164 (166)
+++++.
T Consensus 198 ~~~~~~ 203 (210)
T TIGR01262 198 FQRAHP 203 (210)
T ss_pred HHHhCc
Confidence 998865
No 7
>PRK11752 putative S-transferase; Provisional
Probab=99.96 E-value=5.5e-28 Score=171.19 Aligned_cols=156 Identities=24% Similarity=0.358 Sum_probs=117.8
Q ss_pred CCCCCCcceEeeC----CeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhh
Q 031084 1 MVPFGSLPVIQDG----DFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFA 76 (166)
Q Consensus 1 inP~~~vP~L~~~----~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (166)
+||.|+||+|+++ +.+|+||.+|++||++.++ +++|.++.+++++++|+.+....+ ..+...+... ...
T Consensus 95 iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~-----~L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~-~~~ 167 (264)
T PRK11752 95 INPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFG-----AFLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHF-YAY 167 (264)
T ss_pred hCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcC-----CcCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHH-HHh
Confidence 6999999999964 3689999999999999985 578989999999999999876543 2111111111 110
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcCh---h-hhhcccCCchHHHHHHH
Q 031084 77 KRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPM---E-KEYMIRDRKHVSAWWDD 152 (166)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~---~-~~~~~~~~p~l~~~~~~ 152 (166)
.....+...+....++.+.|+.+|++|++++|++|+++|+|||++++++.++.... . .......+|+|.+|+++
T Consensus 168 --~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~r 245 (264)
T PRK11752 168 --APEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKE 245 (264)
T ss_pred --CCccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHH
Confidence 11222344566677889999999999998899999999999999998887654311 1 11235789999999999
Q ss_pred HhhhhhHHHHHhh
Q 031084 153 ISNRLSWKKVLEL 165 (166)
Q Consensus 153 ~~~~p~~~~~~~~ 165 (166)
|.++|++++++..
T Consensus 246 v~~rPs~k~~~~~ 258 (264)
T PRK11752 246 IAERPAVKRGRIV 258 (264)
T ss_pred HHhCHHHHHHHhc
Confidence 9999999998753
No 8
>PRK15113 glutathione S-transferase; Provisional
Probab=99.96 E-value=2.3e-28 Score=168.56 Aligned_cols=155 Identities=20% Similarity=0.231 Sum_probs=116.6
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||.|+||+|++||.+|+||.+|++||++.+++.....++|.++.+++++++|+.++...+............. ..
T Consensus 53 ~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 128 (214)
T PRK15113 53 YSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVF----AG 128 (214)
T ss_pred cCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhc----cC
Confidence 69999999999999999999999999999997531002889999999999999999876654322110000011 11
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcC-CccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhH
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSK-SKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSW 159 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~-~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 159 (166)
...+...+...+.+.+.++.+|++|++ ++|++|+ +|+||+++++.+.++..... .+ .|+|.+|++++.++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~---~~--~p~l~~~~~r~~~rp~~ 202 (214)
T PRK15113 129 AKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGD---EV--PERLADYATFQWQRASV 202 (214)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCC---CC--CHHHHHHHHHHhcCHHH
Confidence 122233455667789999999999975 4799996 99999999999987653221 22 29999999999999999
Q ss_pred HHHHhh
Q 031084 160 KKVLEL 165 (166)
Q Consensus 160 ~~~~~~ 165 (166)
++++++
T Consensus 203 ~~~~~~ 208 (214)
T PRK15113 203 QRWLAL 208 (214)
T ss_pred HHHHHH
Confidence 998764
No 9
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.96 E-value=8.8e-28 Score=164.40 Aligned_cols=154 Identities=18% Similarity=0.182 Sum_probs=118.1
Q ss_pred CCCCCCcceEe-eCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccC
Q 031084 1 MVPFGSLPVIQ-DGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRG 79 (166)
Q Consensus 1 inP~~~vP~L~-~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (166)
+||.|+||+|+ ++|.+++||.+|++||++.+++. +++|.++.+++++++|..++...+..... ....... .+
T Consensus 43 ~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~---~l~p~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~---~~ 115 (202)
T PRK10357 43 YNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAP---AMLPRDPLAALRVRQLEALADGIMDAALV-SVREQAR---PA 115 (202)
T ss_pred cCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhC---cc
Confidence 59999999998 78899999999999999998643 68899999999999998887665543322 2221111 12
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhH
Q 031084 80 LPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSW 159 (166)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 159 (166)
........+...+.+...|+.+|++|++++ ++|+++|+||+++++++.++............+|+|.+|++++.++|++
T Consensus 116 ~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~ 194 (202)
T PRK10357 116 AQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESF 194 (202)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhh
Confidence 223344556677889999999999998777 9999999999999999887643211111235799999999999999999
Q ss_pred HHH
Q 031084 160 KKV 162 (166)
Q Consensus 160 ~~~ 162 (166)
+++
T Consensus 195 ~~~ 197 (202)
T PRK10357 195 ART 197 (202)
T ss_pred hhc
Confidence 875
No 10
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.3e-27 Score=163.32 Aligned_cols=150 Identities=29% Similarity=0.470 Sum_probs=122.3
Q ss_pred CCCCCCcceEeeCCe-EEeehHHHHHHHHHhhccCCCcCCCCCCHH---HHHHHHHHHHHHhcccChhhHHHHHHHHhhh
Q 031084 1 MVPFGSLPVIQDGDF-TLYESRAIIRYYAEKYKSQGTTDLLGRTVE---ERGLVEQWLEVEAHNFHPPIYQMTTQILFFA 76 (166)
Q Consensus 1 inP~~~vP~L~~~~~-~l~es~~I~~yL~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (166)
+||.|+||+|++++. +|+||.+|++||+++|+.. .++|.++. +++++..|+.+....+.+.+....... ...
T Consensus 45 ~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~---~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 120 (211)
T COG0625 45 LNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP---PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRAL-LGS 120 (211)
T ss_pred cCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC---CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhh-ccc
Confidence 699999999997665 8999999999999999642 38887774 888888999999888888776554433 211
Q ss_pred ccCCCC-CHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhh
Q 031084 77 KRGLPA-DENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 77 ~~~~~~-~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 155 (166)
... .....+.....+...++.+|..|++++|++|+++|+||+++++.+.++.... .....+|++.+|++++.+
T Consensus 121 ---~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~---~~~~~~p~l~~w~~r~~~ 194 (211)
T COG0625 121 ---EPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLG---EELADYPALKAWYERVLA 194 (211)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcC---cccccChHHHHHHHHHHc
Confidence 112 5677788899999999999999999999999999999999999998754322 123689999999999999
Q ss_pred hhhHH
Q 031084 156 RLSWK 160 (166)
Q Consensus 156 ~p~~~ 160 (166)
+|+++
T Consensus 195 rp~~~ 199 (211)
T COG0625 195 RPAFR 199 (211)
T ss_pred CCchh
Confidence 99943
No 11
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=8.9e-27 Score=161.31 Aligned_cols=159 Identities=36% Similarity=0.608 Sum_probs=132.3
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcC-CCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhh-cc
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTD-LLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFA-KR 78 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 78 (166)
+||.|+||+|+|+|..++||.||+.||.++|. ... + ++|.++..++.+++|+.+..+.+.+... ......+ ..
T Consensus 48 ~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~-~~~-~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~ 122 (226)
T KOG0867|consen 48 LNPLGKVPALEDGGLTLWESHAILRYLAEKYG-PLG-GILLPKDLKERAIVDQWLEFENGVLDPVTF---ERPILAPLLV 122 (226)
T ss_pred cCcCCCCCeEecCCeEEeeHHHHHHHHHHHcC-CCC-cccCCcCHHHHHHHHHHHHhhhcccccccc---cceeeeccee
Confidence 69999999999999999999999999999997 444 4 8999999999999999998888877642 1222333 34
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhh
Q 031084 79 GLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLS 158 (166)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 158 (166)
+........+....++...++.+|..|.++.|+.|+++|+||+.+.+.+..+...........++|++.+|++++.++|+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~ 202 (226)
T KOG0867|consen 123 GLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPA 202 (226)
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCcc
Confidence 45557778888999999999999999999999999999999999999988874211113367899999999999999999
Q ss_pred HHHHHh
Q 031084 159 WKKVLE 164 (166)
Q Consensus 159 ~~~~~~ 164 (166)
+++...
T Consensus 203 ~~e~~~ 208 (226)
T KOG0867|consen 203 YEEANE 208 (226)
T ss_pred HHHHHH
Confidence 887543
No 12
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.95 E-value=2.9e-26 Score=157.17 Aligned_cols=144 Identities=22% Similarity=0.302 Sum_probs=104.4
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHh-cccChhhHHHHHHHHhhhccC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEA-HNFHPPIYQMTTQILFFAKRG 79 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (166)
+||+|+||+|++||.+|+||.||++||++++ ++.+.+..++..+ |+.+.. ..+...+ ......
T Consensus 53 ~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~----- 116 (205)
T PTZ00057 53 DTPFEQVPILEMDNIIFAQSQAIVRYLSKKY------KICGESELNEFYA--DMIFCGVQDIHYKF---NNTNLF----- 116 (205)
T ss_pred CCCCCCCCEEEECCEEEecHHHHHHHHHHHc------CCCCCCHHHHHHH--HHHHHHHHHHHHHH---hhhHHH-----
Confidence 5999999999999999999999999999999 4445554444433 333322 1111111 000000
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhcCC--ccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhh
Q 031084 80 LPADENLIKESEEKLGKVLDVYEERLSKS--KYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRL 157 (166)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 157 (166)
.+...+...+.+.+.+..+|+.|+++ +|++|+++|+||+++++++.++... . ...+.++|+|.+|++++.++|
T Consensus 117 ---~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~-~-~~~l~~~P~l~~~~~r~~~~P 191 (205)
T PTZ00057 117 ---KQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK-Y-PNSLKNFPLLKAHNEFISNLP 191 (205)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh-C-hhhhccChhHHHHHHHHHhCh
Confidence 11223455678899999999999754 7999999999999999988776421 1 225689999999999999999
Q ss_pred hHHHHHhh
Q 031084 158 SWKKVLEL 165 (166)
Q Consensus 158 ~~~~~~~~ 165 (166)
++++++++
T Consensus 192 ~~k~y~~~ 199 (205)
T PTZ00057 192 NIKNYISN 199 (205)
T ss_pred HHHHHHHh
Confidence 99999875
No 13
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=3.1e-26 Score=155.28 Aligned_cols=150 Identities=20% Similarity=0.288 Sum_probs=121.0
Q ss_pred C-CCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 2 V-PFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 2 n-P~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
| |.++||||+++|..|+||..|++||++.+++ +. +++|+||-+|++++.|.++++..+........ .
T Consensus 53 np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~-~~-~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~----------~ 120 (231)
T KOG0406|consen 53 NPVHKKVPVLEHNGKPICESLIIVEYIDETWPS-GP-PILPSDPYERAQARFWAEYIDKKVFFVGRFVV----------A 120 (231)
T ss_pred ccccccCCEEEECCceehhhHHHHHHHHhhccC-CC-CCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHH----------h
Confidence 6 8899999999999999999999999999985 22 79999999999999999999876654333222 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhc-CCccccCCCccHhhhhhhhhhHHhhcChhh-----hhcccCCchHHHHHHHHh
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLS-KSKYLAGDFFSLADLSHLPFTQYLVGPMEK-----EYMIRDRKHVSAWWDDIS 154 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~-~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~-----~~~~~~~p~l~~~~~~~~ 154 (166)
.......+.+.+++.+.|..+|+.|. ++.|+.|+++++.|+++++.+......... .....++|+|.+|.+++.
T Consensus 121 ~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~ 200 (231)
T KOG0406|consen 121 AKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMK 200 (231)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHh
Confidence 12223455667788999999999998 789999999999999999776655433221 223578999999999999
Q ss_pred hhhhHHHHH
Q 031084 155 NRLSWKKVL 163 (166)
Q Consensus 155 ~~p~~~~~~ 163 (166)
++++|++++
T Consensus 201 ~~~~V~~~~ 209 (231)
T KOG0406|consen 201 EDEAVKAVL 209 (231)
T ss_pred cChhHHhhc
Confidence 999999765
No 14
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.9e-24 Score=138.07 Aligned_cols=152 Identities=19% Similarity=0.201 Sum_probs=123.2
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||.++||+|++||.+++||.||++||++.+|++ +|+|+++..|+.+++....+.+.+.+.-...+.... +.
T Consensus 52 iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~p---pLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l-----~e 123 (217)
T KOG0868|consen 52 INPMEKVPTLVIDGLTLTESLAIIEYLEETYPDP---PLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKML-----NE 123 (217)
T ss_pred cCchhhCCeEEECCEEeehHHHHHHHHHhcCCCC---CCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHh-----cc
Confidence 6999999999999999999999999999999876 799999999999999999888888765433332222 12
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcC--CccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhh
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSK--SKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLS 158 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~--~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 158 (166)
+....-.......+.+.+..+|+.|.. +.|.+||++|+||+.+.+.+..... ...++..||.+.+..+.+...|.
T Consensus 124 k~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~r---f~vdl~PYPti~ri~e~l~elpa 200 (217)
T KOG0868|consen 124 KEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANR---FHVDLTPYPTITRINEELAELPA 200 (217)
T ss_pred cccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhh---ccccCCcCchHHHHHHHHHhCHH
Confidence 222122455666778899999999964 5899999999999999998876632 23477899999999999999999
Q ss_pred HHHHH
Q 031084 159 WKKVL 163 (166)
Q Consensus 159 ~~~~~ 163 (166)
|+..+
T Consensus 201 Fq~ah 205 (217)
T KOG0868|consen 201 FQAAH 205 (217)
T ss_pred HHhcC
Confidence 98764
No 15
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=2.2e-24 Score=145.32 Aligned_cols=151 Identities=27% Similarity=0.319 Sum_probs=116.7
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCC
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLP 81 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (166)
.|+|++|+|..||..|.+|.||++||+++| ++.|+++.++++++...+...+.....+. ........ .
T Consensus 47 ~pfgqlP~l~vDg~~i~QS~AI~RyLArk~------gl~Gkt~~E~a~vD~i~d~~~D~~~~~~~----~~~~~~~~--g 114 (206)
T KOG1695|consen 47 MPFGQLPVLEVDGKKLVQSRAILRYLARKF------GLAGKTEEEEAWVDMIVDQFKDFRWEIFR----QPYTAPEA--G 114 (206)
T ss_pred CCCCCCCEEeECCEeeccHHHHHHHHHHHh------CcCCCCHHHHHHHHHHHHhhhhHHHHHHH----Hhhhhhhh--c
Confidence 599999999999999999999999999999 89999999999999988866553332111 11111111 1
Q ss_pred CCHHHHH-HHHHHHHHHHHHHHHhhc--CCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhh
Q 031084 82 ADENLIK-ESEEKLGKVLDVYEERLS--KSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLS 158 (166)
Q Consensus 82 ~~~~~~~-~~~~~l~~~l~~le~~L~--~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 158 (166)
..+...+ .........+..+++.|. +++|++||++|+||+.++..+..+....... ....+|+|+++.++|.++|.
T Consensus 115 ~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~-~~~~~P~L~a~~~kv~~~p~ 193 (206)
T KOG1695|consen 115 KSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPS-ALDHFPKLKAFKERVSSIPN 193 (206)
T ss_pred cchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCch-hhccChHHHHHHHHHhcCch
Confidence 1111122 566778889999999997 4589999999999999999999877531122 35678999999999999999
Q ss_pred HHHHHhh
Q 031084 159 WKKVLEL 165 (166)
Q Consensus 159 ~~~~~~~ 165 (166)
++++++.
T Consensus 194 ik~~i~~ 200 (206)
T KOG1695|consen 194 IKKYLES 200 (206)
T ss_pred HHHHHhc
Confidence 9999875
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.92 E-value=7.1e-25 Score=151.05 Aligned_cols=140 Identities=24% Similarity=0.253 Sum_probs=100.3
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||.|+||+|++||.+|+||.+|++||+++|++. .+ .++.+++.++..+.. .+... ... .
T Consensus 54 inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~---~l--~~~~~~a~i~~~~~~-------~~~~~-----~~~---~ 113 (213)
T PLN02378 54 ISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDP---PL--KTPAEFASVGSNIFG-------TFGTF-----LKS---K 113 (213)
T ss_pred hCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCC---CC--CCHHHHHHHHHHHHH-------HHHHH-----Hhc---C
Confidence 6999999999999999999999999999999643 23 345566665543321 11111 010 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhc--CCccccCCCccHhhhhhhhhhHHhhcChh--hhh-cccCCchHHHHHHHHhh
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLS--KSKYLAGDFFSLADLSHLPFTQYLVGPME--KEY-MIRDRKHVSAWWDDISN 155 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~--~~~fl~G~~~t~aDi~~~~~l~~~~~~~~--~~~-~~~~~p~l~~~~~~~~~ 155 (166)
.. .+...+.+.+.|+.+|++|+ +++|++|+++|+||+++++++.++..... ... ....+|+|.+|++++.+
T Consensus 114 ~~----~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 189 (213)
T PLN02378 114 DS----NDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFS 189 (213)
T ss_pred Ch----hhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhc
Confidence 10 12234577788999999997 46999999999999999999876542211 111 23679999999999999
Q ss_pred hhhHHHHHh
Q 031084 156 RLSWKKVLE 164 (166)
Q Consensus 156 ~p~~~~~~~ 164 (166)
+|++++++.
T Consensus 190 rpa~~~~~~ 198 (213)
T PLN02378 190 LDSFEKTKT 198 (213)
T ss_pred CCCeecccC
Confidence 999987653
No 17
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.92 E-value=8.4e-24 Score=146.46 Aligned_cols=144 Identities=15% Similarity=0.138 Sum_probs=103.2
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCC-CcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQG-TTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRG 79 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (166)
+||.|+||+|+++|.+|+||.+|++||++.|+... + .+.|.++..++....+. ..+..++ .
T Consensus 53 inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p-~l~p~~~~~~~~~~~l~--------~~~~~~~-----~---- 114 (236)
T TIGR00862 53 LAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYP-KLSPKHPESNTAGLDIF--------AKFSAYI-----K---- 114 (236)
T ss_pred HCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHHHHH--------HHHHHHH-----H----
Confidence 69999999999999999999999999999996421 2 35555554433221111 1111110 0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhc------------------CCccccCCCccHhhhhhhhhhHHhhcCh--hhhhc
Q 031084 80 LPADENLIKESEEKLGKVLDVYEERLS------------------KSKYLAGDFFSLADLSHLPFTQYLVGPM--EKEYM 139 (166)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~le~~L~------------------~~~fl~G~~~t~aDi~~~~~l~~~~~~~--~~~~~ 139 (166)
. ..+...+...+.+.+.++.+|+.|. +++|+.|+++|+|||++++.+.++.... ...+.
T Consensus 115 ~-~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~ 193 (236)
T TIGR00862 115 N-SNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFD 193 (236)
T ss_pred c-CCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcC
Confidence 1 1122334455668899999999986 5799999999999999999998877431 11233
Q ss_pred -ccCCchHHHHHHHHhhhhhHHHHH
Q 031084 140 -IRDRKHVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 140 -~~~~p~l~~~~~~~~~~p~~~~~~ 163 (166)
.+++|+|.+|++++.++|+|++.+
T Consensus 194 i~~~~p~l~~w~~~~~~~~sf~~t~ 218 (236)
T TIGR00862 194 IPAEFTGVWRYLSNAYAREEFTNTC 218 (236)
T ss_pred ccccCchHHHHHHHHhccchHHhhC
Confidence 589999999999999999999764
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.91 E-value=5.2e-24 Score=146.54 Aligned_cols=147 Identities=18% Similarity=0.186 Sum_probs=103.0
Q ss_pred CCCCCCcceEe-eCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHh-----
Q 031084 1 MVPFGSLPVIQ-DGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILF----- 74 (166)
Q Consensus 1 inP~~~vP~L~-~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 74 (166)
+||.|+||+|+ +||..++||.+|++||+++|+++ .+ + . .+++.++.|+.+....+...+...+.....
T Consensus 42 ~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~---~l-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (210)
T PRK10387 42 MIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKP---LL-T-G-KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFAT 115 (210)
T ss_pred hcCCcccceEEecCCeEecCHHHHHHHHHHhCCCc---cC-C-C-cccHHHHHHHHHHHHHhhcchhcccccCCCcccCC
Confidence 48999999995 88999999999999999999742 33 3 1 256778888887655444322111100000
Q ss_pred ----------hh-ccCCCCC--HHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhccc
Q 031084 75 ----------FA-KRGLPAD--ENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIR 141 (166)
Q Consensus 75 ----------~~-~~~~~~~--~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~ 141 (166)
.. ..+ ... ....+...+.+.+.|+.+|++|++ +|++|+++|+||+++++.+.++..... ..
T Consensus 116 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~----~~ 189 (210)
T PRK10387 116 PSARQYFIDKKEASIG-DFDALLAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG----IE 189 (210)
T ss_pred HHHHHHHHHhHHhccC-CHHHHHhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC----CC
Confidence 00 000 000 001135577899999999999976 999999999999999999988764321 23
Q ss_pred CCchHHHHHHHHhhhhhH
Q 031084 142 DRKHVSAWWDDISNRLSW 159 (166)
Q Consensus 142 ~~p~l~~~~~~~~~~p~~ 159 (166)
.+|+|.+|++||.++|++
T Consensus 190 ~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 190 WPPRVADYRDNMSKKTQV 207 (210)
T ss_pred CCHHHHHHHHHHHHHhCC
Confidence 469999999999999976
No 19
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.91 E-value=1.4e-23 Score=148.16 Aligned_cols=140 Identities=21% Similarity=0.251 Sum_probs=102.4
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+||.|+||+|+++|..|+||.+|++||++.|++. .+ .++.+++.+++|+... +... ... .
T Consensus 107 iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~---~L--~~~~era~i~~~l~~~-------~~~~-----~~~---~ 166 (265)
T PLN02817 107 ISPEGKVPVVKLDEKWVADSDVITQALEEKYPDP---PL--ATPPEKASVGSKIFST-------FIGF-----LKS---K 166 (265)
T ss_pred hCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCC---CC--CCHHHHHHHHHHHHHH-------HHHH-----hcc---C
Confidence 6999999999988899999999999999999753 34 2567788877764311 1111 110 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcC-CccccCCCccHhhhhhhhhhHHhhcChh--hhh-cccCCchHHHHHHHHhhh
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSK-SKYLAGDFFSLADLSHLPFTQYLVGPME--KEY-MIRDRKHVSAWWDDISNR 156 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~-~~fl~G~~~t~aDi~~~~~l~~~~~~~~--~~~-~~~~~p~l~~~~~~~~~~ 156 (166)
... +...+.+.+.++.+|++|++ ++|++|+++|+||+++++.+.++..... ... ....+|+|.+|++++.++
T Consensus 167 ~~~----~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~r 242 (265)
T PLN02817 167 DPG----DGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSM 242 (265)
T ss_pred Ccc----hHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcc
Confidence 111 12235677889999999974 6999999999999999999877643211 111 236799999999999999
Q ss_pred hhHHHHHh
Q 031084 157 LSWKKVLE 164 (166)
Q Consensus 157 p~~~~~~~ 164 (166)
|+|++.+.
T Consensus 243 ps~~~~~~ 250 (265)
T PLN02817 243 ESFVKTRA 250 (265)
T ss_pred hhHhhcCC
Confidence 99998654
No 20
>PLN02907 glutamate-tRNA ligase
Probab=99.88 E-value=4.9e-22 Score=155.87 Aligned_cols=126 Identities=17% Similarity=0.275 Sum_probs=101.9
Q ss_pred CCCCCcceEe-eCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 2 VPFGSLPVIQ-DGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 2 nP~~~vP~L~-~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+|.|+||+|+ ++|..++||.||++||++.++.. .++|.++.+++++++|+.++.....
T Consensus 33 ~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~---~L~p~d~~erAqV~qWL~~~~~~~~------------------ 91 (722)
T PLN02907 33 LKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLP---GFYGQDAFESSQVDEWLDYAPTFSS------------------ 91 (722)
T ss_pred CCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCc---CCCCCCHHHHHHHHHHHHHHhhccc------------------
Confidence 6999999999 68899999999999999999643 6889999999999999998643110
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhh
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLS 158 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 158 (166)
...+...|+.+|.+|++++|++|+++|+||+++++.+...............+|+|.+|+++|.++|+
T Consensus 92 ----------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 92 ----------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred ----------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 01345678999999999999999999999999999886541111111124689999999999999999
No 21
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.87 E-value=3.8e-22 Score=137.09 Aligned_cols=147 Identities=17% Similarity=0.202 Sum_probs=98.5
Q ss_pred CCCCCCcceEe-eCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHH---------
Q 031084 1 MVPFGSLPVIQ-DGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTT--------- 70 (166)
Q Consensus 1 inP~~~vP~L~-~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 70 (166)
+||.|+||+|+ +||..++||.+|++||+++|+.+ .+.+. .+..++.|+.++...+...+...+.
T Consensus 41 ~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (209)
T TIGR02182 41 MIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEP---LLTGK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFAT 114 (209)
T ss_pred hcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCc---cCCCC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCC
Confidence 58999999998 88999999999999999999642 33332 4556777777654444322211100
Q ss_pred ----HHHhhh-ccCCCCCH---HHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccC
Q 031084 71 ----QILFFA-KRGLPADE---NLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRD 142 (166)
Q Consensus 71 ----~~~~~~-~~~~~~~~---~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~ 142 (166)
...... ..+..... ...+...+.+++.|+.+|++|++++|+.| ++|+||+++++.+.++.... .. .
T Consensus 115 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~----~~-~ 188 (209)
T TIGR02182 115 QSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA----GI-N 188 (209)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec----CC-C
Confidence 000000 00000000 00134567889999999999999999965 59999999999998766422 11 3
Q ss_pred Cc-hHHHHHHHHhhhhhH
Q 031084 143 RK-HVSAWWDDISNRLSW 159 (166)
Q Consensus 143 ~p-~l~~~~~~~~~~p~~ 159 (166)
+| +|.+|++||++++++
T Consensus 189 ~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 189 WPSRVADYLDNMSKKSKV 206 (209)
T ss_pred CChHHHHHHHHHHHHhCC
Confidence 56 999999999999875
No 22
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.84 E-value=5.2e-20 Score=125.11 Aligned_cols=162 Identities=23% Similarity=0.262 Sum_probs=106.8
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCC-CHHHHHHHH------------HHHHH--Hh-----cc
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGR-TVEERGLVE------------QWLEV--EA-----HN 60 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~-~~~~~~~~~------------~~~~~--~~-----~~ 60 (166)
+||.|.||||.+|+.+|+++.-|++|++++|-+.. .|.|. ++.+..++. .|-.- +. ..
T Consensus 72 lNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger--~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s 149 (325)
T KOG4420|consen 72 LNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGER--VLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDS 149 (325)
T ss_pred cCCCCCCceEecCCeecccHHHHHHHHHHhhcccc--cccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccc
Confidence 69999999999999999999999999999985322 56663 222222221 11110 00 00
Q ss_pred cChhhHHHHHHHHhhhc----------------------------cCCCCCHHHHHHHHHHHHHHHHHHHHhhcC----C
Q 031084 61 FHPPIYQMTTQILFFAK----------------------------RGLPADENLIKESEEKLGKVLDVYEERLSK----S 108 (166)
Q Consensus 61 ~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~l~~~l~~le~~L~~----~ 108 (166)
+.+....+ .....+.. ...-.+....+.....+...|+.+|..|.+ .
T Consensus 150 ~iP~~~~i-R~~~~k~~~~v~~l~~~e~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~ 228 (325)
T KOG4420|consen 150 MIPKYAEI-RRHLAKATTDVMKLDHEEEPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCE 228 (325)
T ss_pred cCcccHHH-HHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 01111100 00000000 000112234556677888888999999876 5
Q ss_pred ccccCCCccHhhhhhhhhhHHhhcChhhhh--cccCCchHHHHHHHHhhhhhHHHHHhh
Q 031084 109 KYLAGDFFSLADLSHLPFTQYLVGPMEKEY--MIRDRKHVSAWWDDISNRLSWKKVLEL 165 (166)
Q Consensus 109 ~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~p~~~~~~~~ 165 (166)
+|++|+.+|+||+++...|.++...+...- ...+.|+|..|++|+++|+++++++..
T Consensus 229 ~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~ 287 (325)
T KOG4420|consen 229 LWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRKVLGD 287 (325)
T ss_pred eeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHHhhhh
Confidence 999999999999999999999887654332 335889999999999999999998754
No 23
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.80 E-value=1.2e-18 Score=109.45 Aligned_cols=117 Identities=60% Similarity=1.025 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 125 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~ 125 (166)
+++++++|+.+....+.+.+........+.+..+...++...+...+.+.+.++.+|++|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 57889999999988888876655444444443334556666777889999999999999998999999999999999999
Q ss_pred hhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHH
Q 031084 126 FTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 163 (166)
.+.++....... ....+|+|.+|++++.++|++++++
T Consensus 82 ~~~~~~~~~~~~-~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMATPFAK-LFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHccchh-hhhcCchHHHHHHHHHhCHHHHhhC
Confidence 987765322222 3468999999999999999998753
No 24
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.78 E-value=1.3e-18 Score=108.65 Aligned_cols=113 Identities=18% Similarity=0.231 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhh
Q 031084 42 RTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADL 121 (166)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi 121 (166)
+++..++.+++|+.+....+.+.+....+.... +. ...+...+.+.+.+..+|++|++++|++|+++|+||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi 73 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRY------PE--ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADW 73 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhc------Cc--ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHH
Confidence 367899999999999999888776655433221 11 1366778899999999999999999999999999999
Q ss_pred hhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHH
Q 031084 122 SHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKV 162 (166)
Q Consensus 122 ~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 162 (166)
++++.+.++...........++|+|.+|++++.++|+++++
T Consensus 74 ~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 74 AIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 99988766543211122357999999999999999999986
No 25
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.76 E-value=8e-18 Score=104.87 Aligned_cols=113 Identities=26% Similarity=0.324 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 125 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~ 125 (166)
+++++++|+.|.+..+.+.+...+...... ....+...+.....+.+.|+.+|+.|++++|++|+++|+|||++++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 76 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYA----PEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFP 76 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhC----CCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHH
Confidence 368899999999999998766543332221 2344556677889999999999999998999999999999999999
Q ss_pred hhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 126 FTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
++.+....... ....+|++.+|++++.++|+++++++
T Consensus 77 ~~~~~~~~~~~--~~~~~p~l~~w~~~~~~~p~~~~~~~ 113 (113)
T cd03178 77 WVRRLEWIGID--DLDDFPNVKRWLDRIAARPAVQRGLA 113 (113)
T ss_pred HHHHHHhcccc--chhhchHHHHHHHHHhhCHHHHHhcC
Confidence 99887543221 25689999999999999999998753
No 26
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.76 E-value=3.8e-18 Score=106.40 Aligned_cols=113 Identities=21% Similarity=0.320 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 125 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~ 125 (166)
+++++++|+.|....+.+.+.......... .+....+...+...+.+.+.++.+|+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWA--TDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccc--cChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHH
Confidence 478999999999998888764333211110 011223455677888999999999999998899999999999999999
Q ss_pred hhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHH
Q 031084 126 FTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 163 (166)
.+.++.... ....++|++.+|++++.++|++++++
T Consensus 80 ~~~~~~~~~---~~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 80 VLRWAPGVG---LDLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHhhcC---CChhhChHHHHHHHHHHhCHHhHhhC
Confidence 988765322 23468999999999999999999863
No 27
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.72 E-value=5.2e-17 Score=102.65 Aligned_cols=115 Identities=23% Similarity=0.322 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhh
Q 031084 47 RGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPF 126 (166)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~ 126 (166)
++++++|+.+....+.+.+...+.... . ..+.+....+...+.+.+.|+.+|+.|++++|++|+++|+||+++++.
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~ 77 (123)
T cd03181 2 EAQVLQWVSFANTELLPAVAAWFLPLL-G---IAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGA 77 (123)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHc-C---ccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHH
Confidence 678999999999998887765443221 1 123445567788999999999999999989999999999999999999
Q ss_pred hHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHhh
Q 031084 127 TQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLEL 165 (166)
Q Consensus 127 l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 165 (166)
+.++............+|++.+|++++.++|++++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 116 (123)
T cd03181 78 LLLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGE 116 (123)
T ss_pred HHHHHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCC
Confidence 887643211111246799999999999999999998765
No 28
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.72 E-value=1e-16 Score=99.32 Aligned_cols=109 Identities=18% Similarity=0.293 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 125 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~ 125 (166)
+++++++|+.+..+.+.+.+...+...... ......+...+...+.+.+.|+.+|++|++++|++|+++|+||+++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRT--PPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcC--CcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHH
Confidence 478899999999999998876543322211 122344566677889999999999999998999999999999999998
Q ss_pred hhHHhhcChhhhhcccCCchHHHHHHHHhhhhhH
Q 031084 126 FTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSW 159 (166)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 159 (166)
++...... .....++|+|.+|+++++++|+|
T Consensus 80 ~~~~~~~~---~~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 80 SAYRWFEL---PIERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHc---ccccccCchHHHHHHHHHhCCCC
Confidence 87543322 12457899999999999999975
No 29
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.72 E-value=6.5e-17 Score=99.84 Aligned_cols=105 Identities=15% Similarity=0.194 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhh
Q 031084 45 EERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 124 (166)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~ 124 (166)
.++++++.|+.++...+.+.+..... . .+...+...+.+.+.|..+|..|++++|++|+++|+|||+++
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~ 70 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEK---------G--RKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALA 70 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh---------C--cHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHH
Confidence 47899999999998887766543321 1 134456778899999999999999999999999999999999
Q ss_pred hhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHH
Q 031084 125 PFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKV 162 (166)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 162 (166)
+.+.++...+. . ....+|++.+|++++.++|+++++
T Consensus 71 ~~~~~~~~~~~-~-~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 71 PLLWRLPALGI-E-LPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHcCC-C-CcccchHHHHHHHHHHCCHHHHHh
Confidence 99865542221 1 124799999999999999999875
No 30
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.72 E-value=1.3e-16 Score=101.26 Aligned_cols=116 Identities=23% Similarity=0.335 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhcccChhhHHHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHh-hcCCccccCCCccHhhhhhh
Q 031084 47 RGLVEQWLEVEAHNFHPPIYQMTTQILFFAK-RGLPADENLIKESEEKLGKVLDVYEER-LSKSKYLAGDFFSLADLSHL 124 (166)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~le~~-L~~~~fl~G~~~t~aDi~~~ 124 (166)
++++++|+.+....+.+.+...+......+. .+....+...+...+.+.+.++.+|++ +++++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 4678899999888887665443333322222 223345677778889999999999997 55578999999999999999
Q ss_pred hhhHHhhcChhhhhcccCCchHHHHHHHHhh--hhhHHHHHh
Q 031084 125 PFTQYLVGPMEKEYMIRDRKHVSAWWDDISN--RLSWKKVLE 164 (166)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~~~~~~~ 164 (166)
+.+.+...... + ....+|+|.+|++++.+ +|+++++++
T Consensus 82 ~~~~~~~~~~~-~-~~~~~p~l~~w~~~~~~~~~p~~~~~~~ 121 (126)
T cd03183 82 CEIMQPEAAGY-D-VFEGRPKLAAWRKRVKEAGNPLFDEAHK 121 (126)
T ss_pred HHHHHHHhcCC-c-ccccCchHHHHHHHHHHhcchhHHHHHH
Confidence 88876653321 1 24789999999999999 999998765
No 31
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.72 E-value=7.2e-17 Score=104.47 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhh
Q 031084 45 EERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 124 (166)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~ 124 (166)
+.++++++|++|....+.+.+.... ...++...+...+.+.+.|+.+|++|++++|++|+++|+||++++
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~ 72 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAG----------FATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLF 72 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHh----------hccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHH
Confidence 4678899999999887766543211 123455667788899999999999999899999999999999999
Q ss_pred hhhHHhhcChh-----hhhcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 125 PFTQYLVGPME-----KEYMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 125 ~~l~~~~~~~~-----~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
+.+.++..... .......+|+|.+|++++.++|++++++.
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~ 117 (142)
T cd03190 73 TTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTN 117 (142)
T ss_pred HHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcC
Confidence 99876532110 11124689999999999999999998653
No 32
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.71 E-value=1.1e-16 Score=100.55 Aligned_cols=114 Identities=21% Similarity=0.235 Sum_probs=85.6
Q ss_pred CCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhcc----CCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCc
Q 031084 41 GRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKR----GLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFF 116 (166)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~ 116 (166)
|.++.+++++++|+.+..+.+.+.+..........+.. +....+...+.....+.+.|+.+|++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 45788999999999999988887765333222111100 00123445566778899999999999999999999999
Q ss_pred cHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhh
Q 031084 117 SLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRL 157 (166)
Q Consensus 117 t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 157 (166)
|+|||++++.+.++..... ....+|+|.+|+++++++|
T Consensus 82 t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 9999999988877653221 4578999999999999986
No 33
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.71 E-value=1.5e-16 Score=100.30 Aligned_cols=115 Identities=16% Similarity=0.093 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhc--CCccccCCCccHhhhh
Q 031084 45 EERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLS--KSKYLAGDFFSLADLS 122 (166)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~--~~~fl~G~~~t~aDi~ 122 (166)
.+++++++|+.++.+.+.+.+........... .+. ..+...+...+.+.+.|+.+|++|+ +++|++|+++|+|||+
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~ 79 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEE-LGL-DEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADIC 79 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHH
Confidence 47899999999999998876443332221111 011 1233344556778999999999997 3479999999999999
Q ss_pred hhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 123 HLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
+++.+.++... .+....+|+|.+|++++.++|++++++.
T Consensus 80 ~~~~~~~~~~~---~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 80 LVPQVYNARRF---GVDLSPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHHh---CCCcccCcHHHHHHHHHHhChhHHHhCc
Confidence 99998765432 2235789999999999999999998764
No 34
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.71 E-value=9e-17 Score=100.70 Aligned_cols=115 Identities=23% Similarity=0.246 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHHhcccChhhHHHHHHHHhh-h-ccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhh
Q 031084 43 TVEERGLVEQWLEVEAHNFHPPIYQMTTQILFF-A-KRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLAD 120 (166)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aD 120 (166)
++.+++++++|+.++...+.+.+...+...... + ..+...++...+...+.+.+.|..+|+.|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 466899999999999888877665444321110 1 00134556778888999999999999999988999999999999
Q ss_pred hhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhH
Q 031084 121 LSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSW 159 (166)
Q Consensus 121 i~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 159 (166)
|++++.+.++..... . ...++|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~~~-~-~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVKL-R-VPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhcCC-C-CccccHHHHHHHHHHHhccCC
Confidence 999999987654321 1 235899999999999999974
No 35
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.71 E-value=5.5e-17 Score=102.97 Aligned_cols=109 Identities=18% Similarity=0.257 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhh
Q 031084 45 EERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHL 124 (166)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~ 124 (166)
.++++++.|+.++...+.+.+...+. . .+...+...+.+.+.++.+|+.|++++|++|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~ 70 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLA-----A------KGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALG 70 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHc-----c------chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHH
Confidence 46889999999998877766543321 1 134456678899999999999999899999999999999999
Q ss_pred hhhHHhhcCh---hhh-hcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 125 PFTQYLVGPM---EKE-YMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 125 ~~l~~~~~~~---~~~-~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
+.+.++.... ... .....+|++.+|++++.++|++++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 114 (126)
T cd03185 71 SFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLP 114 (126)
T ss_pred HHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCC
Confidence 9888764321 111 124679999999999999999998754
No 36
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.69 E-value=2.6e-16 Score=98.80 Aligned_cols=109 Identities=25% Similarity=0.320 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 125 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~ 125 (166)
+++++++|+.|....+.+.+...+...... .. ...+...+.+.+.++.+|+.|++++|++|+++|+||+++++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~ 74 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFG----GA---EPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVA 74 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHc----CC---CCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHH
Confidence 578899999999888887665544332211 11 23445677899999999999988899999999999999999
Q ss_pred hhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHH
Q 031084 126 FTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 163 (166)
++.++... ..+....+|+|.+|++++.++|++++..
T Consensus 75 ~~~~~~~~--~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 75 TVSTLEAL--LPLDLSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHHHHHh--cCCChhhCchHHHHHHHHHcccchHHHH
Confidence 99887531 1123467999999999999999999764
No 37
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.65 E-value=2.1e-15 Score=95.08 Aligned_cols=108 Identities=13% Similarity=0.079 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 125 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~ 125 (166)
+++++++.++.+.+.. ..+..++. ....+...+...+.+.+.+..+|++|++++|++|+++|+||+++++
T Consensus 2 e~~~id~~~~~~~d~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~ 71 (121)
T cd03209 2 ERIRVDMLEQQAMDLR-MGLARICY---------SPDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYE 71 (121)
T ss_pred chHHHHHHHHHHHHHH-HHHHHhhc---------CcchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHH
Confidence 4667777777654422 22222211 1122445666788899999999999998899999999999999999
Q ss_pred hhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHhh
Q 031084 126 FTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLEL 165 (166)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 165 (166)
.+.++..... . ....+|+|.+|++++.++|+++++++.
T Consensus 72 ~~~~~~~~~~-~-~~~~~P~l~~~~~rv~~~p~vk~~~~~ 109 (121)
T cd03209 72 ALDQHRIFEP-D-CLDAFPNLKDFLERFEALPKISAYMKS 109 (121)
T ss_pred HHHHHHHhCc-c-ccccChHHHHHHHHHHHCHHHHHHHhc
Confidence 9888754221 1 357899999999999999999999864
No 38
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.64 E-value=1.3e-15 Score=96.37 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcC--CccccCCCccHhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSK--SKYLAGDFFSLADLSH 123 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~fl~G~~~t~aDi~~ 123 (166)
++++.+.|+++++ .+...+...+. . +...+...+.+.+.|+.+|+.|++ ++|++|+++|+||+++
T Consensus 2 ~ra~~r~~~~~~~-~~~~~~~~~~~---------~---~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~ 68 (124)
T cd03184 2 EKAQQKLLLERFS-KVVSAFYKLLG---------A---PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMI 68 (124)
T ss_pred hHHHHHHHHHHHh-hhhHHHHHHHh---------c---cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHh
Confidence 4788999999886 33333222221 1 223446778899999999999975 7999999999999999
Q ss_pred hhhhHHhhcChhh---hhcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 124 LPFTQYLVGPMEK---EYMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 124 ~~~l~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
++++.++...... ....+.+|+|.+|++++.++|++++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~ 112 (124)
T cd03184 69 WPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYT 112 (124)
T ss_pred hHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChHHHHHhC
Confidence 9998776533211 1245789999999999999999998764
No 39
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.62 E-value=1.4e-15 Score=93.26 Aligned_cols=100 Identities=20% Similarity=0.291 Sum_probs=76.3
Q ss_pred HHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhh
Q 031084 52 QWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLV 131 (166)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~ 131 (166)
+|+.+....+.+.+...+. +. .+...+...+.+.+.++.+|.+|++++|++|+++|+|||++++.+.+..
T Consensus 3 ~w~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~ 72 (103)
T cd03207 3 RWLFFYAGVVEPALIAKAM-----GI-----EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGL 72 (103)
T ss_pred eeeeeccccccHHHHHHHc-----CC-----CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHH
Confidence 4666666666665443221 11 1223556678899999999999998999999999999999999988875
Q ss_pred cChhhhhcccCCchHHHHHHHHhhhhhHHHHHhh
Q 031084 132 GPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLEL 165 (166)
Q Consensus 132 ~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 165 (166)
.. . ....+|+|.+|++++.++|++++++++
T Consensus 73 ~~---~-~~~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 73 QF---G-LLPERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred Hc---C-CCCCChHHHHHHHHHHcCHHHHHHhcc
Confidence 43 2 246899999999999999999998764
No 40
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.62 E-value=4.4e-15 Score=95.47 Aligned_cols=76 Identities=24% Similarity=0.249 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHhh
Q 031084 88 KESEEKLGKVLDVYEERLS--KSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLEL 165 (166)
Q Consensus 88 ~~~~~~l~~~l~~le~~L~--~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 165 (166)
+...+.+.+.|+.+|+.|+ +++|++|+++|+||+++++.+.++..... . .+..+|+|.+|++++.++|++++++++
T Consensus 38 ~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~-~-~l~~~P~l~~~~~rv~~~P~vk~~~~~ 115 (137)
T cd03208 38 LIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDP-S-LLSDFPLLQAFKTRISNLPTIKKFLQP 115 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhch-h-hhccChHHHHHHHHHHcCHHHHHHHhc
Confidence 4444567899999999998 67899999999999999999988753221 1 357899999999999999999999874
No 41
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.61 E-value=4.4e-15 Score=89.67 Aligned_cols=95 Identities=16% Similarity=0.260 Sum_probs=74.6
Q ss_pred HHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 031084 24 IRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEE 103 (166)
Q Consensus 24 ~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~ 103 (166)
+|||++.- +++|.++.+.++++.|++.....+.. ...+.+.+.++.+|+
T Consensus 1 ~r~~~~~~------~~~~~~~~~~~~vd~~~d~~~~~l~~-------------------------~~~~~~~~~l~~le~ 49 (96)
T cd03200 1 ARFLYRLL------GPAPNAPNAATNIDSWVDTAIFQLAE-------------------------GSSKEKAAVLRALNS 49 (96)
T ss_pred CchHHHHh------cccCCCchHHHHHHHHHHHHHHHHhc-------------------------CCHHHHHHHHHHHHH
Confidence 47888873 78899999999999999975433220 023455678889999
Q ss_pred hhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhh
Q 031084 104 RLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 104 ~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 155 (166)
+|++++|++|+++|+|||++++.+.+. ......+|+|.+|++++.+
T Consensus 50 ~L~~~~fl~Gd~~tiADi~l~~~l~~~------~~~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 50 ALGRSPWLVGSEFTVADIVSWCALLQT------GLASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHcCCCccCCCCCCHHHHHHHHHHHHc------ccccccChHHHHHHHHHHh
Confidence 999999999999999999999887643 1133679999999999976
No 42
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.60 E-value=3.1e-14 Score=97.67 Aligned_cols=149 Identities=17% Similarity=0.191 Sum_probs=101.1
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccCh------------------
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHP------------------ 63 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------ 63 (166)
++.|++|.++-||+-++||..|+.+|.+.|.-+ .. -++++++..+.....+++.+.-
T Consensus 89 Sr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~---~~--L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~ 163 (281)
T KOG4244|consen 89 SRNGTLPFIELNGEHIADSDLIEDRLRKHFKIP---DD--LSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRK 163 (281)
T ss_pred ccCCCcceEEeCCeeccccHHHHHHHHHHcCCC---CC--CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHh
Confidence 578999999999999999999999999998421 11 3455666555554444332211
Q ss_pred ----------hhHHHHHHHHhhh-----ccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhH
Q 031084 64 ----------PIYQMTTQILFFA-----KRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQ 128 (166)
Q Consensus 64 ----------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~ 128 (166)
.+..++....+.. ..|. -.....++..+-+++.|..+++.|++++|+.|+++|-+|+.+|+.|.
T Consensus 164 ~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~-IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa 242 (281)
T KOG4244|consen 164 LIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA-IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLA 242 (281)
T ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHhhcc-ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhh
Confidence 1111111111100 0011 12122344566778899999999999999999999999999999999
Q ss_pred HhhcCh---hhhhcccCCchHHHHHHHHhhh
Q 031084 129 YLVGPM---EKEYMIRDRKHVSAWWDDISNR 156 (166)
Q Consensus 129 ~~~~~~---~~~~~~~~~p~l~~~~~~~~~~ 156 (166)
.+.... ..++....+|+|..|++||++.
T Consensus 243 ~v~YP~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 243 QVYYPFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred heeccCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 887631 2333557899999999999874
No 43
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.60 E-value=2.5e-15 Score=92.32 Aligned_cols=104 Identities=24% Similarity=0.362 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLP 125 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~ 125 (166)
+++++++|+.+..+.+.+.+..........+ ....++...+...+.+.+.++.+|+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLG--LGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeecc--CCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHH
Confidence 5789999999988888876544322211111 23445567778899999999999999988899999999999999999
Q ss_pred hhHHhhcChhhhhcccCCchHHHHHHHHh
Q 031084 126 FTQYLVGPMEKEYMIRDRKHVSAWWDDIS 154 (166)
Q Consensus 126 ~l~~~~~~~~~~~~~~~~p~l~~~~~~~~ 154 (166)
.+.++... .+...++|+|.+|+++++
T Consensus 80 ~~~~~~~~---~~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 80 YTHVADEG---GFDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHhcccc---CCChHhCccHHHHHHhhC
Confidence 99887532 223567999999999874
No 44
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.59 E-value=2.2e-14 Score=91.01 Aligned_cols=78 Identities=22% Similarity=0.230 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC---CccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHH
Q 031084 86 LIKESEEKLGKVLDVYEERLSK---SKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKV 162 (166)
Q Consensus 86 ~~~~~~~~l~~~l~~le~~L~~---~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 162 (166)
..+...+.+.+.|..+|+.|++ ++|++|+++|+||+++++.+.++.... .. ....+|+|.+|+++|.++|+|+++
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~-~~-~~~~~P~l~~~~~rv~~~p~v~~~ 109 (126)
T cd03210 32 GKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLA-PG-CLDAFPLLKAFVERLSARPKLKAY 109 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhC-hH-hhhcChHHHHHHHHHHhCcHHHHH
Confidence 3456677789999999999974 589999999999999999987765322 12 357899999999999999999998
Q ss_pred Hhh
Q 031084 163 LEL 165 (166)
Q Consensus 163 ~~~ 165 (166)
++.
T Consensus 110 ~~~ 112 (126)
T cd03210 110 LES 112 (126)
T ss_pred HhC
Confidence 764
No 45
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.58 E-value=5.9e-15 Score=92.05 Aligned_cols=110 Identities=19% Similarity=0.160 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhc-CCccccCCCccHhhhhh
Q 031084 45 EERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLS-KSKYLAGDFFSLADLSH 123 (166)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~-~~~fl~G~~~t~aDi~~ 123 (166)
.++++++.|+.++.+.+.+..........+. + .......+...+.+.+.++.+|.+|+ +++|++| ++|+||+++
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l 76 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFA---G-AKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDL 76 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceec---C-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHH
Confidence 5789999999999998876521111011011 1 11113445667788889999999995 5589999 599999999
Q ss_pred hhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 124 LPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 124 ~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
++.+.++...+ +++. |++.+|.+|+.+||+|+++++
T Consensus 77 ~~~~~~~~~~g---~~l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 77 ALMLNRLVLNG---DPVP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHHHHcC---CCCC--HHHHHHHHHHHCCHHHHHHHh
Confidence 99998876542 2333 999999999999999999875
No 46
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.57 E-value=8.5e-15 Score=88.35 Aligned_cols=74 Identities=26% Similarity=0.523 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhh
Q 031084 83 DENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRL 157 (166)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 157 (166)
.+...+.....+.+.|+.+|+.|++++|++|+++|+||+++++.+.++....... ..+++|+|.+|++++.++|
T Consensus 22 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~-~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 22 DEEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDF-LFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTT-THTTSHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCc-ccccCHHHHHHHHHHHcCC
Confidence 4556778889999999999999999999999999999999999999876543332 1379999999999999998
No 47
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.57 E-value=1.1e-14 Score=88.80 Aligned_cols=99 Identities=20% Similarity=0.288 Sum_probs=72.6
Q ss_pred HHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHh
Q 031084 51 EQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYL 130 (166)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~ 130 (166)
++|+.+..+.+.+............ .....+.....+.+.++.+|++|++++|++|+++|+||+++++++.+.
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~ 74 (100)
T cd03206 2 QRWLSVAAGEIANGPAAARLITLFG-------APLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALA 74 (100)
T ss_pred ceehhhhhhhcccchhHHHHHHHhC-------CHhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHH
Confidence 4678888777765433322221111 111345678899999999999999999999999999999999888654
Q ss_pred hcChhhhhcccCCchHHHHHHHHhhhhhH
Q 031084 131 VGPMEKEYMIRDRKHVSAWWDDISNRLSW 159 (166)
Q Consensus 131 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 159 (166)
... .....++|+|.+|++++.++|++
T Consensus 75 ~~~---~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 75 PEG---GVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred hcc---CCChhhCcHHHHHHHHHHhCcCC
Confidence 321 22356899999999999999974
No 48
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.55 E-value=2.3e-14 Score=90.90 Aligned_cols=82 Identities=21% Similarity=0.261 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhcC----------------CccccCCCccHhhhhhhhhhHHhhcCh--hhhhc-ccC
Q 031084 82 ADENLIKESEEKLGKVLDVYEERLSK----------------SKYLAGDFFSLADLSHLPFTQYLVGPM--EKEYM-IRD 142 (166)
Q Consensus 82 ~~~~~~~~~~~~l~~~l~~le~~L~~----------------~~fl~G~~~t~aDi~~~~~l~~~~~~~--~~~~~-~~~ 142 (166)
.++...+...+.+...|+.+|.+|++ ++|++|+++|+|||++++.+.++.... ...+. ...
T Consensus 22 ~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~ 101 (134)
T cd03198 22 SNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPAD 101 (134)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 34455677788999999999999986 679999999999999999988664221 11223 378
Q ss_pred CchHHHHHHHHhhhhhHHHHH
Q 031084 143 RKHVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 143 ~p~l~~~~~~~~~~p~~~~~~ 163 (166)
+|+|.+|++++.+||+|++.+
T Consensus 102 ~P~L~aw~~ri~aRPsfk~t~ 122 (134)
T cd03198 102 LTGLWRYLKNAYQREEFTNTC 122 (134)
T ss_pred CHHHHHHHHHHHCCHHHHHHc
Confidence 999999999999999999865
No 49
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.54 E-value=3e-14 Score=80.94 Aligned_cols=68 Identities=25% Similarity=0.385 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHH
Q 031084 85 NLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDD 152 (166)
Q Consensus 85 ~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~ 152 (166)
...+...+.+.+.|+.+|++|++++|++|+++|+||+++++++.++............+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 45677889999999999999999999999999999999999999988765432245899999999986
No 50
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.54 E-value=1.4e-13 Score=91.36 Aligned_cols=142 Identities=20% Similarity=0.229 Sum_probs=96.5
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCC
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGL 80 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
+.|.|++|+|..|+..++||..|.++|+++++.+.. .-+ .+.+.+.+-. .++..+..++ .
T Consensus 55 ~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~-~~~--~~~E~asag~-------diF~kF~~fi----------~ 114 (221)
T KOG1422|consen 55 ISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKL-PTL--APPESASAGS-------DIFAKFSAFI----------K 114 (221)
T ss_pred hCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCC-ccc--CCHHHHhhHH-------HHHHHHHHHH----------h
Confidence 579999999999999999999999999999976432 111 1222222110 1111011111 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcC---CccccCCCccHhhhhhhhhhHHhhcCh--hhhhcc-cCCchHHHHHHHHh
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSK---SKYLAGDFFSLADLSHLPFTQYLVGPM--EKEYMI-RDRKHVSAWWDDIS 154 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~---~~fl~G~~~t~aDi~~~~~l~~~~~~~--~~~~~~-~~~p~l~~~~~~~~ 154 (166)
...+..-+...+.+-..|..|+++|+. ++|+.||++|.||+.+.+=|..+.... ...+.+ +.++.+.+|++++-
T Consensus 115 ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~y 194 (221)
T KOG1422|consen 115 KSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAY 194 (221)
T ss_pred CchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 111222233445677788999999974 699999999999999999998876432 222233 67899999999999
Q ss_pred hhhhHHHH
Q 031084 155 NRLSWKKV 162 (166)
Q Consensus 155 ~~p~~~~~ 162 (166)
++.+|...
T Consensus 195 a~d~F~~t 202 (221)
T KOG1422|consen 195 ARDEFTNT 202 (221)
T ss_pred hHHHhhcC
Confidence 99888753
No 51
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=2.6e-14 Score=98.48 Aligned_cols=145 Identities=21% Similarity=0.307 Sum_probs=111.2
Q ss_pred CCcceEeeCC--e-EEeehHHHHHHHHHhhcc---CCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhcc
Q 031084 5 GSLPVIQDGD--F-TLYESRAIIRYYAEKYKS---QGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKR 78 (166)
Q Consensus 5 ~~vP~L~~~~--~-~l~es~~I~~yL~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (166)
-+||||.|.. + +-.||..|++-+...|.+ ... .++|.. .+.+++.+.+++...+...+-+ .
T Consensus 128 vTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~-dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk----------~ 194 (324)
T COG0435 128 VTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAV-DLYPEA--LRTEIDELNKWIYDTVNNGVYK----------A 194 (324)
T ss_pred eeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhcc-ccCCHH--HHHHHHHHHhhhcccccCceee----------e
Confidence 3799999653 2 338999999999887753 122 567664 6778888888877766654321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhh-----cccCCchHHHHHHHH
Q 031084 79 GLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEY-----MIRDRKHVSAWWDDI 153 (166)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~-----~~~~~p~l~~~~~~~ 153 (166)
|....+++-+++.+.+-+.|+.+|..|+++.|++|+++|.||+-+|+.|.++--+....| -+..||+|..|..++
T Consensus 195 GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~L 274 (324)
T COG0435 195 GFATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDL 274 (324)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHH
Confidence 345667778888899999999999999999999999999999999999877644332222 346699999999999
Q ss_pred hhhhhHHHH
Q 031084 154 SNRLSWKKV 162 (166)
Q Consensus 154 ~~~p~~~~~ 162 (166)
-+.|+|.+.
T Consensus 275 Yq~pg~~~T 283 (324)
T COG0435 275 YQLPGFAET 283 (324)
T ss_pred hcCcccccc
Confidence 999998764
No 52
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.52 E-value=1.4e-13 Score=85.83 Aligned_cols=106 Identities=15% Similarity=0.224 Sum_probs=67.3
Q ss_pred HHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhh---cCCccccCCCccHhhhhhhhhhH
Q 031084 52 QWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERL---SKSKYLAGDFFSLADLSHLPFTQ 128 (166)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L---~~~~fl~G~~~t~aDi~~~~~l~ 128 (166)
.|..+.++.+...+..++......+..+ ...+...+...+.+.+.+..+|..+ ++++|++|+ +|+||+++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~ 82 (114)
T cd03194 5 AWARSAAAEMHSGFAALRSECPMNLRAR-VPGFELSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVT 82 (114)
T ss_pred HHHHHHHHHHHCcHHHHHHhCCCCcccC-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHH
Confidence 3444555555555554443333222211 1112223344555555666666655 467899999 9999999999988
Q ss_pred HhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 129 YLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 129 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
+....+ .+ ..|+|.+|++++.++|+++++++
T Consensus 83 ~~~~~~---~~--~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 83 RFRTYG---LP--LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHcC---CC--CCHHHHHHHHHHHCCHHHHHHHh
Confidence 775321 12 23999999999999999999875
No 53
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.52 E-value=2e-13 Score=85.89 Aligned_cols=104 Identities=19% Similarity=0.320 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhc---CCccccCCCccHh
Q 031084 43 TVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLS---KSKYLAGDFFSLA 119 (166)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~---~~~fl~G~~~t~a 119 (166)
++..|+.+++|+.+. ..+... .+.+.++... .+.+.+.++.+|+.|+ +++|++| ++|+|
T Consensus 1 d~~~ra~~~~~~~~~-----~~~~~~----~~~~~~~~~~--------~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlA 62 (120)
T cd03203 1 DPAKREFADELLAYT-----DAFTKA----LYSSLIKGDP--------SAEAAAALDYIENALSKFDDGPFFLG-QFSLV 62 (120)
T ss_pred CHHHHHHHHHHHHHH-----HHHHHH----HHHHHhcCCc--------hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHH
Confidence 456889999999882 111111 1122111111 1234567777777776 4799999 99999
Q ss_pred hhhhhhhhHHhhcC--hhhhhcc-cCCchHHHHHHHHhhhhhHHHHHh
Q 031084 120 DLSHLPFTQYLVGP--MEKEYMI-RDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 120 Di~~~~~l~~~~~~--~~~~~~~-~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
||++++++.++... ....+.+ .++|+|.+|++++.++|++++...
T Consensus 63 Di~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~ 110 (120)
T cd03203 63 DIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQ 110 (120)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcC
Confidence 99999998755321 0111222 589999999999999999998653
No 54
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.51 E-value=5.5e-14 Score=86.55 Aligned_cols=79 Identities=25% Similarity=0.287 Sum_probs=63.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcCC----------ccccCCCccHhhhhhhhhhHHhhcChhhhh--cccCCchHHH
Q 031084 81 PADENLIKESEEKLGKVLDVYEERLSKS----------KYLAGDFFSLADLSHLPFTQYLVGPMEKEY--MIRDRKHVSA 148 (166)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~le~~L~~~----------~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~--~~~~~p~l~~ 148 (166)
..+....+...+.+...|+.+|.+|.++ +|++|+++|+|||++++.+.++........ ....+|+|.+
T Consensus 21 ~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 21 HDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEA 100 (111)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHH
Confidence 3456667888999999999999999765 499999999999999999988764321110 1358999999
Q ss_pred HHHHHhhhhhH
Q 031084 149 WWDDISNRLSW 159 (166)
Q Consensus 149 ~~~~~~~~p~~ 159 (166)
|++++.+||+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999975
No 55
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=1.1e-12 Score=86.86 Aligned_cols=151 Identities=13% Similarity=0.199 Sum_probs=109.2
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhccCCCcCCCC-CCHHHHHHHHHHHHHHhcccChhhH--HH----HHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKSQGTTDLLG-RTVEERGLVEQWLEVEAHNFHPPIY--QM----TTQIL 73 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~ 73 (166)
++|.|+||.|..|.+.++|-.+|..+.+.+-- .+.+ .+..+++.++.+++..++.+...-. .+ .+...
T Consensus 62 mSP~G~vPllr~g~~~~aef~pIV~fVeak~~-----~l~s~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~v 136 (257)
T KOG3027|consen 62 MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGV-----TLTSWLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEV 136 (257)
T ss_pred cCCCCCCceeeecchhhhhhhHHHHHHHHhcc-----chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 58999999999999999999999999998741 2222 2455888899998887765532110 00 00000
Q ss_pred hhhccC-------------------------CCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhH
Q 031084 74 FFAKRG-------------------------LPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQ 128 (166)
Q Consensus 74 ~~~~~~-------------------------~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~ 128 (166)
-.+..| -.-+....++..+.....++.++..|+.++||.|++||-+|..+|+++.
T Consensus 137 T~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHly 216 (257)
T KOG3027|consen 137 TALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLY 216 (257)
T ss_pred hhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhH
Confidence 011111 1123334567788889999999999999999999999999999999999
Q ss_pred HhhcChhhhh----cccCCchHHHHHHHHhhh
Q 031084 129 YLVGPMEKEY----MIRDRKHVSAWWDDISNR 156 (166)
Q Consensus 129 ~~~~~~~~~~----~~~~~p~l~~~~~~~~~~ 156 (166)
.+........ .+++|++|.+++.|+.+.
T Consensus 217 tilTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 217 TILTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8876543322 448999999999999874
No 56
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.45 E-value=1.6e-13 Score=86.36 Aligned_cols=77 Identities=21% Similarity=0.282 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHhhcC-CccccCCCccHhhhhhhhhhHHhhcChhh--hh-cccCCchHHHHHHHHhhhhhHHHHH
Q 031084 88 KESEEKLGKVLDVYEERLSK-SKYLAGDFFSLADLSHLPFTQYLVGPMEK--EY-MIRDRKHVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 88 ~~~~~~l~~~l~~le~~L~~-~~fl~G~~~t~aDi~~~~~l~~~~~~~~~--~~-~~~~~p~l~~~~~~~~~~p~~~~~~ 163 (166)
+...+.+.+.|..+|..|++ ++|++|+++|+||+++++.+.++...... .+ ....+|+|.+|++++.+||+|++.+
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 44567789999999999985 79999999999999999987666432111 11 1368999999999999999999865
Q ss_pred h
Q 031084 164 E 164 (166)
Q Consensus 164 ~ 164 (166)
.
T Consensus 109 ~ 109 (121)
T cd03201 109 A 109 (121)
T ss_pred C
Confidence 4
No 57
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.45 E-value=2.1e-13 Score=82.67 Aligned_cols=99 Identities=27% Similarity=0.426 Sum_probs=73.4
Q ss_pred HHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHh
Q 031084 51 EQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYL 130 (166)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~ 130 (166)
+.|+.++...+.+.+......... .....+...+...+.+.+.++.+|++|++++|++|+++|+||+++++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~ 77 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFV----GPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARL 77 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeecc----CCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHH
Confidence 467777777776665444332211 1123456677888999999999999999999999999999999999999988
Q ss_pred hcChhhhhcccCCchHHHHHHHH
Q 031084 131 VGPMEKEYMIRDRKHVSAWWDDI 153 (166)
Q Consensus 131 ~~~~~~~~~~~~~p~l~~~~~~~ 153 (166)
............+|++.+|++++
T Consensus 78 ~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 78 DLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHhhhhhhhhccCccHHHHHHhC
Confidence 75432211246899999999874
No 58
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=3.4e-13 Score=92.30 Aligned_cols=145 Identities=19% Similarity=0.278 Sum_probs=105.0
Q ss_pred CCcceEeeCC---eEEeehHHHHHHHHHhhcc-------CCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHh
Q 031084 5 GSLPVIQDGD---FTLYESRAIIRYYAEKYKS-------QGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILF 74 (166)
Q Consensus 5 ~~vP~L~~~~---~~l~es~~I~~yL~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (166)
.+||||.|-. .+-.||..|++.+...|.+ +.. .|+|. ..+++++.|.+|+...+...+-+
T Consensus 122 fTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~l-DL~P~--~L~~~Ide~N~wvy~~INNGVYk------- 191 (319)
T KOG2903|consen 122 FTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVL-DLYPS--SLRAQIDETNSWVYDKINNGVYK------- 191 (319)
T ss_pred EEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCcc-ccCCH--HHHHHHhhhhceecccccCceee-------
Confidence 4799999753 3448999999999854431 111 34554 46888999988877666543321
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCc--cccCCCccHhhhhhhhhhHHhhcChhhhh------cccCCchH
Q 031084 75 FAKRGLPADENLIKESEEKLGKVLDVYEERLSKSK--YLAGDFFSLADLSHLPFTQYLVGPMEKEY------MIRDRKHV 146 (166)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~--fl~G~~~t~aDi~~~~~l~~~~~~~~~~~------~~~~~p~l 146 (166)
.|....++.-+..-+.+-+.|+.+|+.|+++. |++|+++|.|||-+++.+.++..+....+ ...+||+|
T Consensus 192 ---~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l 268 (319)
T KOG2903|consen 192 ---CGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNL 268 (319)
T ss_pred ---eccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHH
Confidence 13344555666777888889999999999876 99999999999999999877654432222 33599999
Q ss_pred HHHHHHHhh-hhhHHHH
Q 031084 147 SAWWDDISN-RLSWKKV 162 (166)
Q Consensus 147 ~~~~~~~~~-~p~~~~~ 162 (166)
..|.+++-+ .|+++..
T Consensus 269 ~~~lk~iY~~~~~~~~T 285 (319)
T KOG2903|consen 269 HNWLKNIYWNIPGFSST 285 (319)
T ss_pred HHHHHHHHhhccchhhc
Confidence 999999988 7887653
No 59
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.36 E-value=3.2e-12 Score=77.72 Aligned_cols=67 Identities=27% Similarity=0.442 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCc--cccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhh
Q 031084 85 NLIKESEEKLGKVLDVYEERLSKSK--YLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 85 ~~~~~~~~~l~~~l~~le~~L~~~~--fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 155 (166)
...+...+++.+.|..++++|++++ |++|++||+||++++++|..+... .+. +.+|+|.+|++||++
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~---~~~-~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA---DFP-KDYPNLVRWYERIEE 99 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC---HHT-TTCHHHHHHHHHHHT
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc---ccc-cccHHHHHHHHhhcC
Confidence 3456778899999999999998877 999999999999999999777643 111 689999999999974
No 60
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.35 E-value=3.6e-12 Score=78.10 Aligned_cols=101 Identities=22% Similarity=0.269 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcC--CccccCCCccHhhhhh
Q 031084 46 ERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSK--SKYLAGDFFSLADLSH 123 (166)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~fl~G~~~t~aDi~~ 123 (166)
++++++.+++.+++ +.......++. ..+....+...+...+.+.+.++.+|++|.+ ++|++|+++|+||+++
T Consensus 2 e~~~v~~~~~~~~d-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l 75 (104)
T cd03192 2 EAARVDALVDTIAD-LRAEFAKYFYE-----KDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVV 75 (104)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHhhc-----CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHH
Confidence 46778888887543 33322222211 0111223566777888999999999999987 8999999999999999
Q ss_pred hhhhHHhhcChhhhhcccCCchHHHHHHHH
Q 031084 124 LPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 153 (166)
Q Consensus 124 ~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 153 (166)
++++.++....... ....+|+|.+|++++
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 76 FDVLDYLLYLDPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHhhCchh-hHHhChhHHHHHHhC
Confidence 99998876432211 156899999999874
No 61
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.34 E-value=3.6e-12 Score=80.58 Aligned_cols=68 Identities=13% Similarity=0.164 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhh
Q 031084 87 IKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 87 ~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 155 (166)
.+...+.+.+.|+.+|++|++++|+.|+++|+||+++++++.+........ ....+|+|.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~-~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFP-LLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCccc-ccccCChHHHHHHHHhc
Confidence 456778899999999999999999999999999999999998876432222 24689999999999976
No 62
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.32 E-value=6.3e-12 Score=74.74 Aligned_cols=66 Identities=14% Similarity=0.187 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcCh--hh--hhcccCCchHHHHHHHHh
Q 031084 89 ESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPM--EK--EYMIRDRKHVSAWWDDIS 154 (166)
Q Consensus 89 ~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~--~~--~~~~~~~p~l~~~~~~~~ 154 (166)
...+.+.+.++.+|+.|++++|++|+++|+||+++++.+.++.... .. ......+|+|.+|++++.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 5677889999999999999999999999999999999988775421 11 113568999999999874
No 63
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.20 E-value=5.5e-11 Score=75.33 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcC-----hhhhhcccCCchHHHHHHHHh
Q 031084 86 LIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGP-----MEKEYMIRDRKHVSAWWDDIS 154 (166)
Q Consensus 86 ~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~-----~~~~~~~~~~p~l~~~~~~~~ 154 (166)
..++..+...+.|+.++..|++++|++|++||.+|+++++++..+... .... .+.++|+|.+|++||.
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~-~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAE-KVKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHH-HHHhCcHHHHHHHhcC
Confidence 456677888899999999999999999999999999999998877643 1121 3678999999999974
No 64
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=7.4e-10 Score=72.02 Aligned_cols=142 Identities=18% Similarity=0.194 Sum_probs=89.7
Q ss_pred CCcceEe-eCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCC
Q 031084 5 GSLPVIQ-DGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPAD 83 (166)
Q Consensus 5 ~~vP~L~-~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (166)
.+||+|+ ++|+.+.||..|++|+++..+++ -+-++ .+-.++.|+..+..- ...+.++++.+..+.+-..
T Consensus 46 KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~---~lt~~---~~pai~~wlrkv~~y----~nkll~PR~~k~~l~EF~T 115 (215)
T COG2999 46 KQVPILQKEDGRAMPESLDIVHYVDELDGKP---LLTGK---VRPAIEAWLRKVNGY----LNKLLLPRFAKSALPEFAT 115 (215)
T ss_pred cccceEEccccccchhhhHHHHHHHHhcCch---hhccC---cCHHHHHHHHHhcch----HhhhhhhhHhhcCCccccC
Confidence 5899999 89999999999999999998542 12222 223455565533221 2223333333222211111
Q ss_pred H---------------------HHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccC
Q 031084 84 E---------------------NLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRD 142 (166)
Q Consensus 84 ~---------------------~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~ 142 (166)
+ ........++...|+.+++.+.+..=+-| .+|.-|+.+|+.|+-+.... .+..
T Consensus 116 ~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~s~~n~-~l~~ddi~vFplLRnlt~v~----gi~w 190 (215)
T COG2999 116 PSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVGPSAVNG-ELSEDDILVFPLLRNLTLVA----GIQW 190 (215)
T ss_pred HHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcCcchhcc-ccchhhhhhhHHhccceecc----cCCC
Confidence 1 11234556777778888888766553444 59999999999998765432 3334
Q ss_pred CchHHHHHHHHhhhhhHHH
Q 031084 143 RKHVSAWWDDISNRLSWKK 161 (166)
Q Consensus 143 ~p~l~~~~~~~~~~p~~~~ 161 (166)
-.++..|..++++...+.=
T Consensus 191 ps~v~dy~~~msektqV~L 209 (215)
T COG2999 191 PSRVADYRDNMSEKTQVNL 209 (215)
T ss_pred cHHHHHHHHHHHHhhCcch
Confidence 5679999999998876653
No 65
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.17 E-value=1.1e-10 Score=70.74 Aligned_cols=71 Identities=20% Similarity=0.234 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHH
Q 031084 80 LPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDI 153 (166)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 153 (166)
....+...+...+.+.+.|..+|++|++++| +++|+|||++++.+.+............++|+|.+|++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 28 EKRSQPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 4556677888999999999999999998888 7899999999999988753211211247899999999875
No 66
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.15 E-value=2.8e-10 Score=79.06 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHhh-cCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhh
Q 031084 90 SEEKLGKVLDVYEERL-SKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNR 156 (166)
Q Consensus 90 ~~~~l~~~l~~le~~L-~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 156 (166)
.++.+...++.+-..| .+++|+.|++|++||+++|++|+.+....... +.-...+|..|+-+|++.
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afk-d~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFK-DCLQNTSIGEWYYRMEAL 355 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHH-HHHhcchHHHHHHHHHHH
Confidence 4566666676766667 46799999999999999999999988764433 555678899999999764
No 67
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.14 E-value=1.3e-09 Score=66.16 Aligned_cols=112 Identities=18% Similarity=0.107 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhcC-CccccCCCccHhhh
Q 031084 43 TVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVYEERLSK-SKYLAGDFFSLADL 121 (166)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~-~~fl~G~~~t~aDi 121 (166)
|...|++.++...+..+.+.+.-...-... .+.........+.+.....+.+...+..|.+ ++||+|+ .|+||.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~v----vf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~ 75 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNV----VFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADA 75 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THH----HHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhh----hhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHH
Confidence 356889999999998887765322211111 1122333455677778888888888888875 6999997 999999
Q ss_pred hhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHHh
Q 031084 122 SHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVLE 164 (166)
Q Consensus 122 ~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 164 (166)
.++..+.++...+ ..--+++..|.++..++|+|+++++
T Consensus 76 dlA~ml~Rl~~~g-----d~vP~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 76 DLALMLNRLVTYG-----DPVPERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHHHHHcC-----CCCCHHHHHHHHHHHCCHHHHHHHH
Confidence 9999999987543 2234679999999999999999875
No 68
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.14 E-value=2e-10 Score=73.73 Aligned_cols=72 Identities=15% Similarity=0.210 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhh----hhcccCCchHHHHHHHHhh
Q 031084 84 ENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEK----EYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 84 ~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~----~~~~~~~p~l~~~~~~~~~ 155 (166)
....++..+...+.|+.+++.|++++|++|+++|.+|+.+++++..+...... ...+.++|+|.+|++||.+
T Consensus 59 ~~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 59 TEVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 34566777888899999999999999999999999999999998776532221 1135789999999999985
No 69
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.04 E-value=1.4e-08 Score=71.74 Aligned_cols=152 Identities=16% Similarity=0.180 Sum_probs=105.0
Q ss_pred CCCCCcceEe-eCCeEEeehHHHHHHHHHhhccCCCcCCCCC-CHHHHHHHHHHHHHHhcccChhhHHHHHH--------
Q 031084 2 VPFGSLPVIQ-DGDFTLYESRAIIRYYAEKYKSQGTTDLLGR-TVEERGLVEQWLEVEAHNFHPPIYQMTTQ-------- 71 (166)
Q Consensus 2 nP~~~vP~L~-~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (166)
.|.|++|+|+ ++|..+++=.-|..+|.+... +. .+... ...+.+....|+++..+.+.+.+.--++-
T Consensus 45 s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~--ky-~~d~dl~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~ 121 (313)
T KOG3028|consen 45 SPSGKLPYLITDNGTKVAGPVKIVQFLKKNTK--KY-NLDADLSAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEV 121 (313)
T ss_pred CCCCCCCeEEecCCceeccHHHHHHHHHHhcc--cC-CcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhH
Confidence 6889999999 556899999999999998531 11 33333 25677888889988888776654322110
Q ss_pred -------HHhhhcc-----------------CCCCCHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhh
Q 031084 72 -------ILFFAKR-----------------GLPADENLIKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFT 127 (166)
Q Consensus 72 -------~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l 127 (166)
...-|.+ -........++..+...+.++.+..+|++++|++|+++|--|..+++++
T Consensus 122 Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~l 201 (313)
T KOG3028|consen 122 TKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYL 201 (313)
T ss_pred hHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHH
Confidence 0000000 0112223456667778889999999999999999999999999999999
Q ss_pred HHhhcChhhhh----cccCCchHHHHHHHHhhh
Q 031084 128 QYLVGPMEKEY----MIRDRKHVSAWWDDISNR 156 (166)
Q Consensus 128 ~~~~~~~~~~~----~~~~~p~l~~~~~~~~~~ 156 (166)
..+.......- -+...+||.+|.+++++.
T Consensus 202 a~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 202 AILLQVALPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHhccCCchhHHHHHHhcchHHHHHHHHHHH
Confidence 88554321110 123489999999998763
No 70
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.01 E-value=5e-10 Score=66.34 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=31.2
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhcc
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKS 33 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~ 33 (166)
+||.|+||+|.++|..++||.+|++||+++++.
T Consensus 56 ~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 56 LAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred hCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 699999999999999999999999999999864
No 71
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.99 E-value=1.3e-09 Score=70.08 Aligned_cols=64 Identities=17% Similarity=0.311 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHhh-cCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhh
Q 031084 91 EEKLGKVLDVYEERL-SKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 91 ~~~l~~~l~~le~~L-~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 155 (166)
++.|...++.+-+.+ ++++|++|+++|+||+++++++..+....... ++.++|+|.+|++||++
T Consensus 81 r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~-Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 81 REWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFK-DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhcccc-chhhCcCHHHHHHHHHH
Confidence 455555555544444 45689999999999999999998887543221 56789999999999986
No 72
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=98.99 E-value=5.5e-10 Score=64.32 Aligned_cols=33 Identities=39% Similarity=0.663 Sum_probs=30.9
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhhcc
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKYKS 33 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~~~ 33 (166)
+||.|+||+|++||..++||.+|++||++.|++
T Consensus 41 ~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 41 LNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp HSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred hcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 489999999999999999999999999999964
No 73
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=98.96 E-value=8.8e-10 Score=63.60 Aligned_cols=31 Identities=61% Similarity=1.047 Sum_probs=28.9
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
+||.|+||+|+++|..++||.+|++||+++|
T Consensus 46 ~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 46 INPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999864
No 74
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=98.95 E-value=1.2e-09 Score=62.95 Aligned_cols=31 Identities=58% Similarity=0.956 Sum_probs=29.5
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
+||.++||+|+++|..++||.+|++||++.|
T Consensus 45 ~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~ 75 (76)
T cd03046 45 INPLGKVPVLVDGDLVLTESAAIILYLAEKY 75 (76)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHHHHhC
Confidence 5899999999999999999999999999987
No 75
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.95 E-value=6.8e-10 Score=63.56 Aligned_cols=28 Identities=32% Similarity=0.655 Sum_probs=26.7
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
+||.|+||+|++||..++||.+|++||+
T Consensus 46 inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 46 LNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 6999999999999999999999999985
No 76
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=98.94 E-value=1.1e-09 Score=63.36 Aligned_cols=32 Identities=31% Similarity=0.423 Sum_probs=29.3
Q ss_pred CCCCCCcceEeeC-CeEEeehHHHHHHHHHhhc
Q 031084 1 MVPFGSLPVIQDG-DFTLYESRAIIRYYAEKYK 32 (166)
Q Consensus 1 inP~~~vP~L~~~-~~~l~es~~I~~yL~~~~~ 32 (166)
+||.|++|+|+++ |..++||.+|++||++.||
T Consensus 45 ~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 45 INPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred hCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 5999999999976 8999999999999999874
No 77
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=98.91 E-value=1.8e-09 Score=63.03 Aligned_cols=32 Identities=47% Similarity=0.784 Sum_probs=29.6
Q ss_pred CCCCCCcceEeeC---CeEEeehHHHHHHHHHhhc
Q 031084 1 MVPFGSLPVIQDG---DFTLYESRAIIRYYAEKYK 32 (166)
Q Consensus 1 inP~~~vP~L~~~---~~~l~es~~I~~yL~~~~~ 32 (166)
+||.|+||+|+++ |..|+||.+|++||++.|+
T Consensus 46 ~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 46 INPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred hCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 5999999999976 7899999999999999984
No 78
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.91 E-value=1.8e-09 Score=63.23 Aligned_cols=29 Identities=48% Similarity=0.699 Sum_probs=27.4
Q ss_pred CCCCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 3 PFGSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 3 P~~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
|+|+||+|++||..++||.||++||++++
T Consensus 54 P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 54 DFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred cCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 99999999999999999999999999864
No 79
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=98.90 E-value=1.6e-09 Score=62.01 Aligned_cols=29 Identities=45% Similarity=0.758 Sum_probs=27.5
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAE 29 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~ 29 (166)
+||.|+||+|+++|..++||.+|++||++
T Consensus 44 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 44 KMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 59999999999999999999999999985
No 80
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.90 E-value=2.3e-09 Score=61.73 Aligned_cols=31 Identities=35% Similarity=0.465 Sum_probs=29.6
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
+||.|+||+|+++|+.++||.+|++||+++|
T Consensus 44 ~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~ 74 (75)
T cd03080 44 RSPKGKLPFIELNGEKIADSELIIDHLEEKY 74 (75)
T ss_pred CCCCCCCCEEEECCEEEcCHHHHHHHHHHHc
Confidence 5899999999999999999999999999987
No 81
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.88 E-value=2.2e-09 Score=63.14 Aligned_cols=32 Identities=38% Similarity=0.477 Sum_probs=29.5
Q ss_pred CCCCCCcceEeeC-CeEEeehHHHHHHHHHhhc
Q 031084 1 MVPFGSLPVIQDG-DFTLYESRAIIRYYAEKYK 32 (166)
Q Consensus 1 inP~~~vP~L~~~-~~~l~es~~I~~yL~~~~~ 32 (166)
+||.|+||+|+++ |..++||.+|++||+++|+
T Consensus 52 ~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 52 SGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 4899999999988 8999999999999999873
No 82
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.87 E-value=3.1e-09 Score=60.70 Aligned_cols=31 Identities=42% Similarity=0.965 Sum_probs=29.0
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
+||.|+||+|+++|..+.||.+|++||+++|
T Consensus 43 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 43 LNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999864
No 83
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.85 E-value=5.1e-09 Score=60.85 Aligned_cols=30 Identities=33% Similarity=0.661 Sum_probs=28.1
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
+|.|+||+|++||..++||.||++||++++
T Consensus 47 ~~~g~vP~L~~~g~~l~ES~AI~~YL~~~~ 76 (79)
T cd03077 47 LMFQQVPMVEIDGMKLVQTRAILNYIAGKY 76 (79)
T ss_pred CCCCCCCEEEECCEEEeeHHHHHHHHHHHc
Confidence 368999999999999999999999999988
No 84
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.83 E-value=4e-09 Score=60.85 Aligned_cols=29 Identities=48% Similarity=0.934 Sum_probs=27.1
Q ss_pred CCCC-CCcceEeeC-CeEEeehHHHHHHHHH
Q 031084 1 MVPF-GSLPVIQDG-DFTLYESRAIIRYYAE 29 (166)
Q Consensus 1 inP~-~~vP~L~~~-~~~l~es~~I~~yL~~ 29 (166)
+||. |+||+|+++ |..++||.||++||++
T Consensus 46 ~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 46 INPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp HTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred cccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 4899 999999998 9999999999999985
No 85
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=98.83 E-value=4.2e-09 Score=60.70 Aligned_cols=30 Identities=60% Similarity=1.084 Sum_probs=27.9
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHh
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEK 30 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~ 30 (166)
+||.|+||+|+++|..++||.+|++||+++
T Consensus 47 ~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 47 RNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 599999999999999999999999999863
No 86
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.83 E-value=4.2e-09 Score=60.05 Aligned_cols=29 Identities=45% Similarity=0.760 Sum_probs=27.3
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAE 29 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~ 29 (166)
+||.|+||+|+++|..++||.+|++||++
T Consensus 44 ~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 44 TLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 59999999999999999999999999974
No 87
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=98.83 E-value=4e-09 Score=59.83 Aligned_cols=29 Identities=38% Similarity=0.627 Sum_probs=26.0
Q ss_pred CCCCCCcceEee-CCeEEeehHHHHHHHHH
Q 031084 1 MVPFGSLPVIQD-GDFTLYESRAIIRYYAE 29 (166)
Q Consensus 1 inP~~~vP~L~~-~~~~l~es~~I~~yL~~ 29 (166)
+||.|+||+|++ +|.++.||.+|++||++
T Consensus 40 ~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~ 69 (70)
T PF13409_consen 40 LNPRGKVPVLVDPDGTVINESLAILEYLEE 69 (70)
T ss_dssp HSTT-SSSEEEETTTEEEESHHHHHHHHHH
T ss_pred cCcCeEEEEEEECCCCEeeCHHHHHHHHhc
Confidence 489999999996 78999999999999987
No 88
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=98.81 E-value=6.1e-09 Score=59.73 Aligned_cols=31 Identities=26% Similarity=0.458 Sum_probs=28.3
Q ss_pred CCCC-CCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 1 MVPF-GSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 1 inP~-~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
+||. |++|+|+++|..++||.+|++||++.+
T Consensus 43 ~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 43 SNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred hCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 4895 999999999999999999999999864
No 89
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=98.81 E-value=5.1e-09 Score=60.00 Aligned_cols=29 Identities=38% Similarity=0.706 Sum_probs=27.2
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAE 29 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~ 29 (166)
+||.|+||+|+++|..++||.+|++||++
T Consensus 46 ~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 46 LNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred hCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 59999999999999999999999999974
No 90
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=98.79 E-value=5.3e-09 Score=59.81 Aligned_cols=28 Identities=61% Similarity=1.089 Sum_probs=26.4
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
+||.|+||+|+++|..++||.+|++||+
T Consensus 46 ~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 46 MNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred hCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 5999999999999999999999999984
No 91
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.76 E-value=1e-08 Score=59.25 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=27.7
Q ss_pred CCCCCCcceEee--CCeEEeehHHHHHHHHHhh
Q 031084 1 MVPFGSLPVIQD--GDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 1 inP~~~vP~L~~--~~~~l~es~~I~~yL~~~~ 31 (166)
+||.|+||+|++ +|..++||.+|++||+++|
T Consensus 45 ~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 45 KGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred hCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 589999999996 4689999999999999875
No 92
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.74 E-value=1e-08 Score=58.66 Aligned_cols=28 Identities=39% Similarity=0.758 Sum_probs=26.4
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
+||.|++|+|+++|..++||.+|++||+
T Consensus 46 ~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 46 FSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred hCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999984
No 93
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.74 E-value=1.3e-08 Score=57.92 Aligned_cols=30 Identities=30% Similarity=0.537 Sum_probs=27.4
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHh
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEK 30 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~ 30 (166)
.+|.|+||+|++||.+|+||.+|+.||.++
T Consensus 45 ~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 45 MSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred cCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 368999999999999999999999999863
No 94
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=98.71 E-value=1.5e-08 Score=58.24 Aligned_cols=29 Identities=38% Similarity=0.724 Sum_probs=26.6
Q ss_pred CCCCCCcceEee-CCeEEeehHHHHHHHHH
Q 031084 1 MVPFGSLPVIQD-GDFTLYESRAIIRYYAE 29 (166)
Q Consensus 1 inP~~~vP~L~~-~~~~l~es~~I~~yL~~ 29 (166)
+||.|++|+|++ +|..++||.+|++||++
T Consensus 45 ~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 45 KFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred hCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 599999999995 58899999999999985
No 95
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=98.69 E-value=1.6e-08 Score=57.72 Aligned_cols=28 Identities=32% Similarity=0.493 Sum_probs=26.4
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
+||.|++|+|+++|..++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 46 LNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999985
No 96
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.66 E-value=2.3e-08 Score=57.00 Aligned_cols=28 Identities=39% Similarity=0.566 Sum_probs=26.3
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
+||.|++|+|+++|..++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 46 LNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred hCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999984
No 97
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.60 E-value=5.5e-08 Score=55.39 Aligned_cols=30 Identities=30% Similarity=0.490 Sum_probs=28.0
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHHHh
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYAEK 30 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~~~ 30 (166)
+||.|+||+|+++|..+.||.+|++||+++
T Consensus 43 ~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 43 RSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred cCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 589999999999999999999999999874
No 98
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=98.58 E-value=5.3e-08 Score=55.31 Aligned_cols=27 Identities=33% Similarity=0.517 Sum_probs=24.9
Q ss_pred CCCCCCcceEeeC-CeEEeehHHHHHHH
Q 031084 1 MVPFGSLPVIQDG-DFTLYESRAIIRYY 27 (166)
Q Consensus 1 inP~~~vP~L~~~-~~~l~es~~I~~yL 27 (166)
+||.|+||+|+++ |..++||.+|++|+
T Consensus 43 ~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 43 ASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred HCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 5999999999974 89999999999997
No 99
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.55 E-value=5.4e-08 Score=55.56 Aligned_cols=28 Identities=32% Similarity=0.699 Sum_probs=25.7
Q ss_pred CCCCCCcceEe-eCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQ-DGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~-~~~~~l~es~~I~~yL~ 28 (166)
+||.|+||+|+ ++|..+.||.+|++||+
T Consensus 45 ~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 45 VNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred hCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 58999999998 58899999999999985
No 100
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.53 E-value=8e-08 Score=54.55 Aligned_cols=29 Identities=21% Similarity=0.385 Sum_probs=26.0
Q ss_pred CCCCCCcceEeeC-CeEEeehHHHHHHHHH
Q 031084 1 MVPFGSLPVIQDG-DFTLYESRAIIRYYAE 29 (166)
Q Consensus 1 inP~~~vP~L~~~-~~~l~es~~I~~yL~~ 29 (166)
+||.++||+|+++ |..+.||.+|++||++
T Consensus 42 ~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 42 MIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred hcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 4799999999965 8999999999999974
No 101
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=98.52 E-value=8.2e-08 Score=54.79 Aligned_cols=28 Identities=39% Similarity=0.623 Sum_probs=25.6
Q ss_pred CCCCCCcceEe-eCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQ-DGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~-~~~~~l~es~~I~~yL~ 28 (166)
+||.|+||+|+ ++|..++||.+|++||+
T Consensus 46 ~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 46 KNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred hCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 58999999998 57889999999999985
No 102
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.44 E-value=2.8e-07 Score=53.12 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=27.3
Q ss_pred CCCCCCcceEeeC----CeEEeehHHHHHHHHHhh
Q 031084 1 MVPFGSLPVIQDG----DFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 1 inP~~~vP~L~~~----~~~l~es~~I~~yL~~~~ 31 (166)
.||.++||+|+++ |.+++||.+|++||++..
T Consensus 42 ~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 42 WSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred HhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 3799999999954 789999999999999864
No 103
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.26 E-value=1.1e-06 Score=49.19 Aligned_cols=28 Identities=46% Similarity=0.870 Sum_probs=26.1
Q ss_pred CCCCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 1 MVPFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 1 inP~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
++|.+++|+|+++|..+.||.+|++||+
T Consensus 44 ~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 44 LNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred cCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4799999999999999999999999984
No 104
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=98.20 E-value=1.9e-05 Score=50.07 Aligned_cols=69 Identities=22% Similarity=0.193 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHH
Q 031084 87 IKESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWK 160 (166)
Q Consensus 87 ~~~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 160 (166)
......++...|..+|..+.......| ++|+-||.+|+.|+.+.... .+.--|++.+|+++|++...|.
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk----gi~~P~~V~~Y~~~~s~~t~V~ 125 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVK----GIQWPPKVRAYMDRMSKATGVP 125 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT----TS---HHHHHHHHHHHHHHT--
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhcc----CCcCCHHHHHHHHHHHHHcCCC
Confidence 356678888899999999876555555 79999999999999886543 3344578999999999987664
No 105
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=98.18 E-value=2.4e-06 Score=64.98 Aligned_cols=120 Identities=20% Similarity=0.253 Sum_probs=83.0
Q ss_pred eCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHH
Q 031084 12 DGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESE 91 (166)
Q Consensus 12 ~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (166)
.+|..+.++..+..|.+... ...+ .+++.+ .++++++.|+++.... ..
T Consensus 43 ~d~~~l~~a~~~~~~~~~~~-~~~~-~lf~~~-~d~~~vd~w~~~s~~~-----------------------------~~ 90 (712)
T KOG1147|consen 43 LDGRKLNGATEPVVYSAALA-KADP-KLFGNN-IDRSQVDHWVSFSSTF-----------------------------SF 90 (712)
T ss_pred cccccccCCccchhhhhhhc-ccCH-hHcCCc-ccHHHHHHHHHHhhhc-----------------------------ch
Confidence 35677777888888876432 2222 477776 7899999999975430 12
Q ss_pred HHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHHHHH
Q 031084 92 EKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 92 ~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 163 (166)
..+...+..++..|.-..|++|..+|+||+++|+.+..-......--..+.+.++.+|++-....++...++
T Consensus 91 ~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 91 DEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred HHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHH
Confidence 356677888888888888999999999999999999764322211112346788999999555555555544
No 106
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.10 E-value=4.9e-06 Score=47.45 Aligned_cols=29 Identities=24% Similarity=0.474 Sum_probs=27.0
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHHHHHh
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRYYAEK 30 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~yL~~~ 30 (166)
+|.|++|+|+++|+.+.||..|++||.++
T Consensus 44 sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 44 SPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 58899999999999999999999999864
No 107
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.04 E-value=4.8e-05 Score=47.85 Aligned_cols=66 Identities=15% Similarity=0.119 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhH
Q 031084 89 ESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSW 159 (166)
Q Consensus 89 ~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 159 (166)
...+++...|..++..+...... +.++|+-||.+|+.|+.+.... .+.--+++.+|+++|++...|
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~~-n~~ls~DDi~lFp~LR~Lt~vk----gi~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEAV-NGQLSTDDIILFPILRNLTLVK----GLVFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCcccc-CCcCCHHHHHHHHHHhhhhhhc----CCCCCHHHHHHHHHHHHHhCC
Confidence 55677888888999988544444 4479999999999998876432 334457899999999987654
No 108
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.30 E-value=0.00038 Score=39.45 Aligned_cols=27 Identities=33% Similarity=0.597 Sum_probs=25.1
Q ss_pred CCCCCCcceEee-CCeEEeehHHHHHHH
Q 031084 1 MVPFGSLPVIQD-GDFTLYESRAIIRYY 27 (166)
Q Consensus 1 inP~~~vP~L~~-~~~~l~es~~I~~yL 27 (166)
++|.|++|+|.+ +++.+.+-..|++||
T Consensus 44 ~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 44 LSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 469999999998 899999999999998
No 109
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=94.07 E-value=0.049 Score=31.26 Aligned_cols=27 Identities=19% Similarity=0.160 Sum_probs=24.0
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
++..+||++..||..+.++..|.+||+
T Consensus 53 ~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 53 TGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred HCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 356799999999999999999999984
No 110
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=93.70 E-value=0.21 Score=33.24 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhcCC---ccccCCC-ccHhhhhhhhhhHHhh
Q 031084 94 LGKVLDVYEERLSKS---KYLAGDF-FSLADLSHLPFTQYLV 131 (166)
Q Consensus 94 l~~~l~~le~~L~~~---~fl~G~~-~t~aDi~~~~~l~~~~ 131 (166)
-.+.+..+++.|++. .|+.|+. +|-.||.+++.|..+.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 456778889999888 9999987 9999999999998765
No 111
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=91.36 E-value=0.26 Score=27.55 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=22.7
Q ss_pred CCCCcceEeeCCeEEeehHHHHHHHH
Q 031084 3 PFGSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 3 P~~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
...++|++..||..+.++..|.+||+
T Consensus 47 g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 47 GAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred CCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 34589999999999999999999974
No 112
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=90.64 E-value=0.41 Score=33.30 Aligned_cols=59 Identities=14% Similarity=0.198 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhhhhhHH
Q 031084 95 GKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISNRLSWK 160 (166)
Q Consensus 95 ~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 160 (166)
...++.++..|.+++|..|.+++-+|+.+|..+.- .. .-..+++..+|+..+.+.....
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~------ep-~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV------EP-QSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc------Cc-chhhhhHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999998777621 11 2346778899998887765554
No 113
>PRK10638 glutaredoxin 3; Provisional
Probab=85.22 E-value=1.5 Score=25.25 Aligned_cols=28 Identities=11% Similarity=-0.045 Sum_probs=22.6
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHHHHH
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRYYAE 29 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~yL~~ 29 (166)
+|..++|++..||..+.+...+.++-.+
T Consensus 48 ~g~~~vP~i~~~g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 48 SGRTTVPQIFIDAQHIGGCDDLYALDAR 75 (83)
T ss_pred hCCCCcCEEEECCEEEeCHHHHHHHHHc
Confidence 6788999999999999888777766443
No 114
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=83.73 E-value=0.55 Score=29.34 Aligned_cols=30 Identities=33% Similarity=0.619 Sum_probs=13.8
Q ss_pred CCCCCcceEe--eCCeEEeehHHHHHHHHHhh
Q 031084 2 VPFGSLPVIQ--DGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 2 nP~~~vP~L~--~~~~~l~es~~I~~yL~~~~ 31 (166)
|+...-|.|. -+|..+.|+.||++|+..-|
T Consensus 31 ~ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF 62 (122)
T PF09635_consen 31 NEDESGPLLKDKKSGFELFEPNAIVRYLANDF 62 (122)
T ss_dssp -SS--S--EEE-S--S----HHHHHHHHTT--
T ss_pred CCccccceeeecCCceEEecccHHHHHHHhhc
Confidence 3444557785 45788999999999999877
No 115
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=83.03 E-value=2 Score=23.46 Aligned_cols=26 Identities=15% Similarity=0.298 Sum_probs=17.8
Q ss_pred CCCCCcceEeeCCeEE--eehHHHHHHH
Q 031084 2 VPFGSLPVIQDGDFTL--YESRAIIRYY 27 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l--~es~~I~~yL 27 (166)
++.+.+|++..+|..+ .+...|.++|
T Consensus 46 ~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 46 LGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred hCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 4567899999888777 4445555444
No 116
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=82.46 E-value=1.8 Score=23.45 Aligned_cols=25 Identities=8% Similarity=-0.045 Sum_probs=20.9
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHH
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRY 26 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~y 26 (166)
++..++|++..+|..+.++..|.+.
T Consensus 46 ~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 46 SGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred hCCCCcCEEEECCEEEecHHHHHHh
Confidence 5678999999999999998877653
No 117
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=82.13 E-value=2.8 Score=24.34 Aligned_cols=27 Identities=11% Similarity=0.134 Sum_probs=24.9
Q ss_pred CCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 5 GSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 5 ~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
..||++..||+.+.++..|.+++.+.+
T Consensus 56 ~tVP~ifi~g~~igG~~dl~~~~~~~~ 82 (86)
T TIGR02183 56 ETVPQIFVDEKHVGGCTDFEQLVKENF 82 (86)
T ss_pred CCcCeEEECCEEecCHHHHHHHHHhcc
Confidence 589999999999999999999998876
No 118
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=81.70 E-value=3.7 Score=23.62 Aligned_cols=27 Identities=15% Similarity=0.132 Sum_probs=24.6
Q ss_pred CCcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 5 GSLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 5 ~~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
..||++..||+.+.+...|.+++.+.+
T Consensus 57 ~~vP~ifi~g~~igg~~~~~~~~~~~~ 83 (85)
T PRK11200 57 ETVPQIFVDQKHIGGCTDFEAYVKENL 83 (85)
T ss_pred CcCCEEEECCEEEcCHHHHHHHHHHhc
Confidence 579999999999999999999999877
No 119
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=81.16 E-value=1.5 Score=23.89 Aligned_cols=19 Identities=32% Similarity=0.329 Sum_probs=15.4
Q ss_pred CCCCCcceEeeCCeEEeeh
Q 031084 2 VPFGSLPVIQDGDFTLYES 20 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es 20 (166)
||.+.+|++.++|..+.+.
T Consensus 46 ~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 46 NGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred cCCcccCEEEECCEEEecC
Confidence 6889999999888776554
No 120
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=72.60 E-value=4.9 Score=24.68 Aligned_cols=26 Identities=8% Similarity=0.277 Sum_probs=21.9
Q ss_pred cceEe-eCCeEEeehHHHHHHHHHhhc
Q 031084 7 LPVIQ-DGDFTLYESRAIIRYYAEKYK 32 (166)
Q Consensus 7 vP~L~-~~~~~l~es~~I~~yL~~~~~ 32 (166)
+|.+. .+|.++++|..|+++.++.+.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 46665 789999999999999998874
No 121
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=65.32 E-value=6.4 Score=21.70 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=13.0
Q ss_pred CCCCcceEe-eCCeEEeeh
Q 031084 3 PFGSLPVIQ-DGDFTLYES 20 (166)
Q Consensus 3 P~~~vP~L~-~~~~~l~es 20 (166)
+...||++. ++|..+.+.
T Consensus 48 ~~~~vP~i~~~~g~~l~~~ 66 (77)
T TIGR02200 48 GNMTVPTVKFADGSFLTNP 66 (77)
T ss_pred CCceeCEEEECCCeEecCC
Confidence 678899997 566666554
No 122
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=62.03 E-value=13 Score=21.38 Aligned_cols=42 Identities=19% Similarity=0.439 Sum_probs=28.0
Q ss_pred ccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHh
Q 031084 109 KYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDIS 154 (166)
Q Consensus 109 ~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~ 154 (166)
+|+.. ++ =|+..|+.+.++....+.. .-+..-++..|.+++.
T Consensus 35 ky~t~--l~-~DvL~~~ll~~L~~~~r~~-~k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 35 KYFTD--LG-YDVLTFCLLERLSNPGRSR-LKDDGTNISQWLQSLA 76 (77)
T ss_pred hhcch--hh-HHHHHHHHHHHHhcccchh-cCcCCCCHHHHHHHHh
Confidence 56542 33 3888999998887544433 2344578999998875
No 123
>PRK15371 effector protein YopJ; Provisional
Probab=59.91 E-value=41 Score=24.68 Aligned_cols=66 Identities=14% Similarity=0.163 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhh
Q 031084 89 ESEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 89 ~~~~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 155 (166)
...++|...++.+|..++++.|+. +.++..|+-..+.|............+.-+..-.++++.++.
T Consensus 23 ~~~~~L~~~i~~le~~~~~G~~~~-~~~~~~Di~~lp~lv~~~N~r~P~LNL~~f~s~~~f~~aik~ 88 (287)
T PRK15371 23 ISNEELKNIITQLEDDIADGSWIH-KNYARTDLEVMPALVAQANNKYPEMNLKLVTSPLDLSIEIKE 88 (287)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCCC-chhHHhhHHhhHHHHHHHhccCCCCCeeecCCHHHHHHHHHH
Confidence 456789999999999999988884 458999999999988777555555555555566666666653
No 124
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=54.24 E-value=17 Score=20.04 Aligned_cols=23 Identities=9% Similarity=-0.093 Sum_probs=17.5
Q ss_pred CCCCCcceEeeCCeEEeehHHHH
Q 031084 2 VPFGSLPVIQDGDFTLYESRAII 24 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~ 24 (166)
++..++|++..||..+.+-....
T Consensus 47 ~g~~~vP~v~i~~~~iGg~~~~~ 69 (73)
T cd03027 47 TGSSVVPQIFFNEKLVGGLTDLK 69 (73)
T ss_pred hCCCCcCEEEECCEEEeCHHHHH
Confidence 57789999999988876655443
No 125
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=53.93 E-value=22 Score=19.47 Aligned_cols=23 Identities=17% Similarity=0.202 Sum_probs=19.4
Q ss_pred CcceEeeCCeEEeehHHHHHHHH
Q 031084 6 SLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 6 ~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
.+|++..+|..+.+...+.++-.
T Consensus 51 ~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 51 TVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred ccCEEEECCEEEeChHHHHHHHh
Confidence 79999999999999888877643
No 126
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=53.34 E-value=22 Score=19.82 Aligned_cols=26 Identities=8% Similarity=0.038 Sum_probs=20.8
Q ss_pred CCCcceEeeCCeEEeehHHHHHHHHH
Q 031084 4 FGSLPVIQDGDFTLYESRAIIRYYAE 29 (166)
Q Consensus 4 ~~~vP~L~~~~~~l~es~~I~~yL~~ 29 (166)
...+|++..+|..+.++..|.++..+
T Consensus 51 ~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 51 QRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 35789988888888888888887765
No 127
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=51.80 E-value=43 Score=22.60 Aligned_cols=63 Identities=11% Similarity=0.138 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhhcCCccccCCCccHhhhhhhhhhHHhhcChhhhhcccCCchHHHHHHHHhh
Q 031084 92 EKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKHVSAWWDDISN 155 (166)
Q Consensus 92 ~~l~~~l~~le~~L~~~~fl~G~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 155 (166)
+.+....+.+++.++++.|. .+.++.-|+-+.+.|..........+.+.-+..-.+..+.+.+
T Consensus 2 ~~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~~N~r~P~LnL~~~~~~~~~~~~i~~ 64 (177)
T PF03421_consen 2 ESLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAAENARYPGLNLHFFDSPEDFVQAIKE 64 (177)
T ss_pred hHHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHHHhhcCCCCceEEcCCcHHHHHHHHh
Confidence 45777888899999988888 5679999999999888766444444444444445555555533
No 128
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=49.88 E-value=1.1e+02 Score=23.26 Aligned_cols=102 Identities=19% Similarity=0.099 Sum_probs=61.2
Q ss_pred EeeCCeEEeehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhH----HHHHHHHhhhccCCCCCHH
Q 031084 10 IQDGDFTLYESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIY----QMTTQILFFAKRGLPADEN 85 (166)
Q Consensus 10 L~~~~~~l~es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 85 (166)
+.+.+..++|+.+|+..|...-.. -+.+-+..++.++..|+......-.+.-. ..+....... .|.+.++
T Consensus 101 ~~~~dQ~~VEaa~la~aL~~a~~~----lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~-~G~~~d~- 174 (361)
T PF10022_consen 101 IGDYDQRLVEAASLALALLRAPEW----LWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKK-VGEEYDE- 174 (361)
T ss_pred cccchhhHhHHHHHHHHHHHCHHH----HHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHH-cCCCCcH-
Confidence 344568899999999998876321 24466888999999999865543322111 1111111111 1444443
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcccc-CCCccHhhhhhh
Q 031084 86 LIKESEEKLGKVLDVYEERLSKSKYLA-GDFFSLADLSHL 124 (166)
Q Consensus 86 ~~~~~~~~l~~~l~~le~~L~~~~fl~-G~~~t~aDi~~~ 124 (166)
..+...++.+|+.-.+.+|.. |. -.-.|.+..
T Consensus 175 ------~~i~~~l~~~e~~Y~GdGWY~DG~-~~~~DYYns 207 (361)
T PF10022_consen 175 ------ERIDYDLERIEEWYLGDGWYSDGP-EFQFDYYNS 207 (361)
T ss_pred ------HHHHHHHHHHHHHhccCCccccCC-ccCCcchHH
Confidence 567778888888755555655 54 356677653
No 129
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=48.48 E-value=33 Score=16.71 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=17.1
Q ss_pred CCcceEeeCCeEEeehHHHHHHHH
Q 031084 5 GSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 5 ~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
|.+|....++..+.....|.+|++
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 25 GELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred CCCCeEEeCCeEEEeHHHHHHHHh
Confidence 567776666677777777777765
No 130
>PRK10329 glutaredoxin-like protein; Provisional
Probab=47.89 E-value=22 Score=20.32 Aligned_cols=18 Identities=33% Similarity=0.564 Sum_probs=13.2
Q ss_pred CCCCCcceEeeCCeEEee
Q 031084 2 VPFGSLPVIQDGDFTLYE 19 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~e 19 (166)
++..+||+++.++..+.+
T Consensus 46 ~g~~~vPvv~i~~~~~~G 63 (81)
T PRK10329 46 QGFRQLPVVIAGDLSWSG 63 (81)
T ss_pred cCCCCcCEEEECCEEEec
Confidence 356799999988765543
No 131
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=45.95 E-value=36 Score=18.96 Aligned_cols=24 Identities=13% Similarity=0.145 Sum_probs=14.9
Q ss_pred CCcceEeeCCeEEeehHHHHHHHH
Q 031084 5 GSLPVIQDGDFTLYESRAIIRYYA 28 (166)
Q Consensus 5 ~~vP~L~~~~~~l~es~~I~~yL~ 28 (166)
..+|.+..+|..+.++..+.+...
T Consensus 53 ~~vP~v~i~g~~igg~~~~~~~~~ 76 (84)
T TIGR02180 53 RTVPNIFINGKFIGGCSDLLALYK 76 (84)
T ss_pred CCCCeEEECCEEEcCHHHHHHHHH
Confidence 356776666666666666655544
No 132
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=44.15 E-value=37 Score=18.87 Aligned_cols=26 Identities=19% Similarity=0.157 Sum_probs=20.1
Q ss_pred CCCcceEeeCCeEEeehHHHHHHHHH
Q 031084 4 FGSLPVIQDGDFTLYESRAIIRYYAE 29 (166)
Q Consensus 4 ~~~vP~L~~~~~~l~es~~I~~yL~~ 29 (166)
...+|++..+|..+.+...+.++-++
T Consensus 47 ~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 47 RRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CCCcCEEEECCEEEcChHHHHHHHHc
Confidence 46789999888888887777776554
No 133
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=42.59 E-value=61 Score=18.06 Aligned_cols=24 Identities=33% Similarity=0.465 Sum_probs=20.2
Q ss_pred CcceEeeCCeEEeehHHHHHHHHHh
Q 031084 6 SLPVIQDGDFTLYESRAIIRYYAEK 30 (166)
Q Consensus 6 ~vP~L~~~~~~l~es~~I~~yL~~~ 30 (166)
.=||+...| ..+|-.+|.+||.+.
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~ 38 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQN 38 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTT
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcC
Confidence 458888777 789999999999993
No 134
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=41.86 E-value=65 Score=18.13 Aligned_cols=37 Identities=11% Similarity=0.325 Sum_probs=21.2
Q ss_pred ehHHHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHh
Q 031084 19 ESRAIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEA 58 (166)
Q Consensus 19 es~~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 58 (166)
|..-|+.++...||.-.. .+.+.+ ....++.|.+...
T Consensus 5 E~~~ll~~I~~aYP~~~~-~f~~~~--~k~~v~~W~~~L~ 41 (71)
T PF11417_consen 5 ETAKLLKLIKAAYPQWAG-NFKPTD--SKETVDLWYDMLK 41 (71)
T ss_dssp HHHHHHHHHHHHST---T-T---ST--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCcchh-ccchhh--HHHHHHHHHHHHH
Confidence 567789999999962111 222333 3456888887643
No 135
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=38.04 E-value=57 Score=18.56 Aligned_cols=26 Identities=12% Similarity=-0.056 Sum_probs=17.9
Q ss_pred CCCCCcceEeeCCeEEeehHHHHHHH
Q 031084 2 VPFGSLPVIQDGDFTLYESRAIIRYY 27 (166)
Q Consensus 2 nP~~~vP~L~~~~~~l~es~~I~~yL 27 (166)
++..+||++..|+..+.....+.++.
T Consensus 49 ~g~~tvP~I~i~~~~igg~~d~~~~~ 74 (80)
T COG0695 49 KGQRTVPQIFIGGKHVGGCDDLDALE 74 (80)
T ss_pred CCCCCcCEEEECCEEEeCcccHHHHH
Confidence 35689999999888776554444443
No 136
>PF10757 YbaJ: Biofilm formation regulator YbaJ; InterPro: IPR019693 YbaJ regulates biofilm formation. It also has an important role in the regulation of motility in the biofilm. YbaJ functions in increasing conjugation, aggregation and decreasing the motility, resulting in an increase of biofilm [].
Probab=36.84 E-value=35 Score=21.24 Aligned_cols=8 Identities=25% Similarity=0.281 Sum_probs=3.3
Q ss_pred HHHHHHHH
Q 031084 22 AIIRYYAE 29 (166)
Q Consensus 22 ~I~~yL~~ 29 (166)
..+++|+.
T Consensus 50 eLIEHIA~ 57 (122)
T PF10757_consen 50 ELIEHIAA 57 (122)
T ss_pred HHHHHHHH
Confidence 33444443
No 137
>PF12622 NpwBP: mRNA biogenesis factor
Probab=36.45 E-value=19 Score=18.53 Aligned_cols=10 Identities=30% Similarity=0.531 Sum_probs=6.7
Q ss_pred CCCCCCcceE
Q 031084 1 MVPFGSLPVI 10 (166)
Q Consensus 1 inP~~~vP~L 10 (166)
+||+|++|--
T Consensus 11 ~NP~G~~P~g 20 (48)
T PF12622_consen 11 LNPLGKPPPG 20 (48)
T ss_pred cCCCCCCCCC
Confidence 4777777754
No 138
>TIGR03412 iscX_yfhJ FeS assembly protein IscX. Members of this protein family are YfhJ, a protein of the ISC system for iron-sulfur cluster assembly. Other genes in the system include iscSUA, hscBA, and fdx.
Probab=36.02 E-value=71 Score=17.53 Aligned_cols=16 Identities=25% Similarity=0.135 Sum_probs=14.0
Q ss_pred eehHHHHHHHHHhhcc
Q 031084 18 YESRAIIRYYAEKYKS 33 (166)
Q Consensus 18 ~es~~I~~yL~~~~~~ 33 (166)
++|..|+.-|.++||+
T Consensus 3 ~D~~eIA~~L~e~~pd 18 (63)
T TIGR03412 3 TDSQEIAIALAEAHPD 18 (63)
T ss_pred cCHHHHHHHHHHHCCC
Confidence 5789999999999974
No 139
>PRK10667 Hha toxicity attenuator; Provisional
Probab=32.61 E-value=48 Score=20.64 Aligned_cols=15 Identities=7% Similarity=0.217 Sum_probs=6.0
Q ss_pred CCCHHHHHHHHHHHH
Q 031084 41 GRTVEERGLVEQWLE 55 (166)
Q Consensus 41 ~~~~~~~~~~~~~~~ 55 (166)
|.+..--..++.+++
T Consensus 67 p~~~~l~~~ideYLD 81 (122)
T PRK10667 67 PEDSKLIEQIDEYLD 81 (122)
T ss_pred CcHhhHHHHHHHHHH
Confidence 443333344444433
No 140
>PRK10721 hypothetical protein; Provisional
Probab=31.80 E-value=84 Score=17.41 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=14.2
Q ss_pred eehHHHHHHHHHhhcc
Q 031084 18 YESRAIIRYYAEKYKS 33 (166)
Q Consensus 18 ~es~~I~~yL~~~~~~ 33 (166)
++|..|+.-|.++||+
T Consensus 6 ~D~~dIA~~L~e~~Pd 21 (66)
T PRK10721 6 TDSREIGEALYDAYPD 21 (66)
T ss_pred cCHHHHHHHHHHHCCC
Confidence 6899999999999974
No 141
>PF12728 HTH_17: Helix-turn-helix domain
Probab=30.97 E-value=78 Score=15.86 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=17.1
Q ss_pred CCcceEeeCCeEEeehHHHHHHHHH
Q 031084 5 GSLPVIQDGDFTLYESRAIIRYYAE 29 (166)
Q Consensus 5 ~~vP~L~~~~~~l~es~~I~~yL~~ 29 (166)
|.+|....++.....-..|.+|+.+
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~~ 49 (51)
T PF12728_consen 25 GKIPPFKIGRKWRIPKSDLDRWLER 49 (51)
T ss_pred CCCCeEEeCCEEEEeHHHHHHHHHh
Confidence 5666666666677777777777765
No 142
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=29.43 E-value=81 Score=16.82 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=18.8
Q ss_pred HHHHHHHHhhcCCccccCCCc-cHhhhh
Q 031084 96 KVLDVYEERLSKSKYLAGDFF-SLADLS 122 (166)
Q Consensus 96 ~~l~~le~~L~~~~fl~G~~~-t~aDi~ 122 (166)
...+.+...+..+.|-.|+.+ |.++++
T Consensus 4 ~i~~~l~~~I~~g~~~~g~~lps~~~la 31 (64)
T PF00392_consen 4 QIYDQLRQAILSGRLPPGDRLPSERELA 31 (64)
T ss_dssp HHHHHHHHHHHTTSS-TTSBE--HHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCEeCCHHHHH
Confidence 345666777777888889987 888886
No 143
>PF09098 Dehyd-heme_bind: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; InterPro: IPR015182 Quinohemoprotein amine dehydrogenases (QHNDH) 1.4.99 from EC) are enzymes produced in the periplasmic space of certain Gram-negative bacteria, such as Paracoccus denitrificans and Pseudomonas putida, in response to primary amines, including n-butylamine and benzylamine. QHNDH catalyses the oxidative deamination of a wide range of aliphatic and aromatic amines through formation of a Schiff-base intermediate involving one of the quinone O atoms []. Catalysis requires the presence of a novel redox cofactor, cysteine tryptophylquinone (CTQ). CTQ is derived from the post-translational modification of specific residues, which involves the oxidation of the indole ring of a tryptophan residue to form tryptophylquinone, followed by covalent cross-linking with a cysteine residue []. There is one CTQ per subunit in QHNDH. In addition to CTQ, two haem c cofactors are present in QHNDH that mediate the transfer of the substrate-derived electrons from CTQ to an external electron acceptor, cytochrome c-550 [, ]. QHNDH is a heterotrimer of alpha, beta and gamma subunits. The alpha and beta subunits contain signal peptides necessary for the translocation of QHNDH to the periplasm. The alpha subunit is composed of four domains - domain 1 forming a dihaem cytochrome, and domains 2-4 forming antiparallel beta-barrel structures; the beta subunit is a 7-bladed beta-propeller that provides part of the active site; and the small, catalytic gamma subunit contains the novel cross-linked CTQ cofactor, in addition to additional thioester cross-links between Cys and Asp/Glu residues that encage CTQ. The gamma subunit assumes a globular secondary structure with two short alpha-helices having many turns and bends []. This entry represents the dihaem cytochrome c domain of the QHNDH alpha subunit. The domain contain two cysteine residues that are involved in thioether linkages to haem []. ; PDB: 1PBY_A 1JJU_A 1JMZ_A 1JMX_A.
Probab=28.52 E-value=42 Score=22.37 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=12.1
Q ss_pred eehHHHHHHHHHhhc
Q 031084 18 YESRAIIRYYAEKYK 32 (166)
Q Consensus 18 ~es~~I~~yL~~~~~ 32 (166)
-|-.+|++||++.++
T Consensus 54 eer~avVkYLAd~~G 68 (167)
T PF09098_consen 54 EERRAVVKYLADTQG 68 (167)
T ss_dssp HHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHccC
Confidence 356899999999983
No 144
>PF06528 Phage_P2_GpE: Phage P2 GpE; InterPro: IPR009493 This entry is represented by Burkholderia phage phiE202, Gp27. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins which are closely related to the GpE tail protein from Phage P2.
Probab=28.34 E-value=34 Score=16.80 Aligned_cols=16 Identities=13% Similarity=0.339 Sum_probs=11.5
Q ss_pred CCchHHHHHHHHhhhh
Q 031084 142 DRKHVSAWWDDISNRL 157 (166)
Q Consensus 142 ~~p~l~~~~~~~~~~p 157 (166)
....|..|.++...|-
T Consensus 19 ~l~El~~Wre~A~~R~ 34 (39)
T PF06528_consen 19 SLDELMDWRERARRRS 34 (39)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 4556899998876653
No 145
>PF03711 OKR_DC_1_C: Orn/Lys/Arg decarboxylase, C-terminal domain; InterPro: IPR008286 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 3Q16_C 3N75_A 2X3L_A 2VYC_D.
Probab=27.97 E-value=39 Score=21.73 Aligned_cols=26 Identities=23% Similarity=0.395 Sum_probs=16.4
Q ss_pred CcceEeeCCeEEeehHHHHHHHHHhh
Q 031084 6 SLPVIQDGDFTLYESRAIIRYYAEKY 31 (166)
Q Consensus 6 ~vP~L~~~~~~l~es~~I~~yL~~~~ 31 (166)
-+|+|..|...-.++..|++||....
T Consensus 88 GIPll~pGE~it~~~~~~i~yl~~l~ 113 (136)
T PF03711_consen 88 GIPLLVPGERITEETEEIIDYLLALQ 113 (136)
T ss_dssp TS-SB-TTEEB-STTHHHHHHHHHHH
T ss_pred CCcEECCccccccchHHHHHHHHHHH
Confidence 36888855544456899999997754
No 146
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=25.78 E-value=1.2e+02 Score=17.48 Aligned_cols=24 Identities=4% Similarity=0.004 Sum_probs=18.8
Q ss_pred CCCcceEeeCCeEEeehHHHHHHH
Q 031084 4 FGSLPVIQDGDFTLYESRAIIRYY 27 (166)
Q Consensus 4 ~~~vP~L~~~~~~l~es~~I~~yL 27 (166)
..++|.+..+|..+.+...+.+..
T Consensus 61 ~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 61 WPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CCCCCEEEECCEEEeCHHHHHHHH
Confidence 357999999999888877777644
No 147
>PHA02776 E7 protein; Provisional
Probab=25.43 E-value=32 Score=20.91 Aligned_cols=13 Identities=23% Similarity=0.383 Sum_probs=11.2
Q ss_pred ccCCCccHhhhhh
Q 031084 111 LAGDFFSLADLSH 123 (166)
Q Consensus 111 l~G~~~t~aDi~~ 123 (166)
+.|.++|+-||.+
T Consensus 1 M~G~~pTl~DIvL 13 (101)
T PHA02776 1 MHGKHPTLKDIVL 13 (101)
T ss_pred CCCCCCcHhHeee
Confidence 4689999999986
No 148
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=24.39 E-value=1.1e+02 Score=15.38 Aligned_cols=19 Identities=11% Similarity=0.310 Sum_probs=12.4
Q ss_pred hHHHHHHHHhhhhhHHHHH
Q 031084 145 HVSAWWDDISNRLSWKKVL 163 (166)
Q Consensus 145 ~l~~~~~~~~~~p~~~~~~ 163 (166)
.+.++++++.+.|.++.-+
T Consensus 5 ~l~~Fl~~~~~d~~l~~~l 23 (49)
T PF07862_consen 5 SLKAFLEKVKSDPELREQL 23 (49)
T ss_pred HHHHHHHHHhcCHHHHHHH
Confidence 4667777777777766544
No 149
>COG2975 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.89 E-value=1.2e+02 Score=16.33 Aligned_cols=16 Identities=19% Similarity=0.287 Sum_probs=13.7
Q ss_pred eehHHHHHHHHHhhcc
Q 031084 18 YESRAIIRYYAEKYKS 33 (166)
Q Consensus 18 ~es~~I~~yL~~~~~~ 33 (166)
+++.-|++-|.+.||+
T Consensus 4 tD~~~Iae~Lyd~~pd 19 (64)
T COG2975 4 TDSQEIAEALYDAYPD 19 (64)
T ss_pred chHHHHHHHHHhcCCC
Confidence 6789999999999963
No 150
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=21.63 E-value=3.2e+02 Score=21.24 Aligned_cols=83 Identities=19% Similarity=0.135 Sum_probs=41.7
Q ss_pred HHHHHHHHhhccCCCcCCCCCCHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHH
Q 031084 22 AIIRYYAEKYKSQGTTDLLGRTVEERGLVEQWLEVEAHNFHPPIYQMTTQILFFAKRGLPADENLIKESEEKLGKVLDVY 101 (166)
Q Consensus 22 ~I~~yL~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 101 (166)
.++++|.++|+-+ +....+..-...+.|+.-+...+...+. ..-+...+.-++++...++..
T Consensus 233 ~~a~~Le~~fGiP----~~~~~p~Gi~~t~~~l~~ia~~~g~~~~--------------~~~e~~i~~e~~~~~~~l~~~ 294 (421)
T cd01976 233 YIARMMEEKYGIP----WMEYNFFGPTKIAESLRKIAAYFDDEIT--------------AKTEEVIAEYKPAMEAVIAKY 294 (421)
T ss_pred HHHHHHHHHhCCc----EEecccCCHHHHHHHHHHHHHHhCchHH--------------HHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999542 2211234444556666654433221110 001122344455566666666
Q ss_pred HHhhcCCcccc-CCCccHhhhhh
Q 031084 102 EERLSKSKYLA-GDFFSLADLSH 123 (166)
Q Consensus 102 e~~L~~~~fl~-G~~~t~aDi~~ 123 (166)
-..|.+++.+. |. .+-+|..+
T Consensus 295 ~~~L~Gkrv~i~~g-~~~~~~~~ 316 (421)
T cd01976 295 RPRLEGKTVMLYVG-GLRPRHYI 316 (421)
T ss_pred HHHcCCCEEEEECC-CCcHHHHH
Confidence 67777765543 32 34555544
No 151
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=20.62 E-value=1.9e+02 Score=17.17 Aligned_cols=23 Identities=9% Similarity=0.043 Sum_probs=15.4
Q ss_pred CCCCcceEeeCCeEEeehHHHHH
Q 031084 3 PFGSLPVIQDGDFTLYESRAIIR 25 (166)
Q Consensus 3 P~~~vP~L~~~~~~l~es~~I~~ 25 (166)
...+||.+..+|..+.+...+.+
T Consensus 58 g~~tvP~Vfi~g~~iGG~ddl~~ 80 (99)
T TIGR02189 58 CSPAVPAVFVGGKLVGGLENVMA 80 (99)
T ss_pred CCCCcCeEEECCEEEcCHHHHHH
Confidence 34577888777777766655554
Done!